RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NDUFV3 (Homo sapiens)

Ensembl gene IDs: ENSG00000160194

Ensembl transcript IDs: ENST00000340344.4, ENST00000354250.7, ENST00000460259.1, ENST00000460740.1

Found 298 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTGTGCTTGGTGCTGGCTATTCGGTTTTAAGCCCTTCCAATGGGTaGAGGAGAGTAAACCAAAATCCCAGAAAGACTAGCCCAACAGGA +
Preference number: 1 (lower is better)
Translates to: AVLGAGYSVLSPSNG*RRVNQNPRKTSPTG
Trigger: TCCTGTTGGGCTAGTCTTTCTGGGATTTTGGTTTACTCTCCTCCACCCATTGGAAGGGCTTAAAACCGAATAGCCAGCACCAAGCACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR TCA 90 bp ACAGAACGTGGGAAATCACATAGACCCAAACAATGGCCCCTTGGGTaGCCACTGTATTGCCACCAGATGGACTATCAAGAAATCATCTGC +
Preference number: 1 (lower is better)
Translates to: TERGKSHRPKQWPLG*PLYCHQMDYQEIIC
Trigger: GCAGATGATTTCTTGATAGTCCATCTGGTGGCAATACAGTGGTCACCCAAGGGGCCATTGTTTGGGTCTATGTGATTTCCCACGTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR GCA 90 bp GAAATCATCTGCAGTGATAGCTACAAAATGCAGAGCTGTGCTTGGTaGTGGCTATTCGGTTTTAAGCCCTTCCAATGGGTGGAGGAGAGT +
Preference number: 1 (lower is better)
Translates to: EIICSDSYKMQSCAW*WLFGFKPFQWVEES
Trigger: ACTCTCCTCCACCCATTGGAAGGGCTTAAAACCGAATAGCCAGCACCAAGCACAGCTCTGCATTTTGTAGCTATCACTGCAGATGATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR CCA 90 bp GACCCAAACAATGGCCCCTTGGGTGACCACTGTATTGCCACCAGATaGACTATCAAGAAATCATCTGCAGTGATAGCTACAAAATGCAGA +
Preference number: 1 (lower is better)
Translates to: DPNNGPLGDHCIATR*TIKKSSAVIATKCR
Trigger: TCTGCATTTTGTAGCTATCACTGCAGATGATTTCTTGATAGTCCATCTGGTGGCAATACAGTGGTCACCCAAGGGGCCATTGTTTGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR GCA 90 bp ACCAGATGGACTATCAAGAAATCATCTGCAGTGATAGCTACAAAATaGAGAGCTGTGCTTGGTGCTGGCTATTCGGTTTTAAGCCCTTCC +
Preference number: 1 (lower is better)
Translates to: TRWTIKKSSAVIATK*RAVLGAGYSVLSPS
Trigger: GGAAGGGCTTAAAACCGAATAGCCAGCACCAAGCACAGCTCTGCATTTTGTAGCTATCACTGCAGATGATTTCTTGATAGTCCATCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR TCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACGCCGGTCTCAACTCCTaGCCTCAGGTGCTCCACCCG +
Preference number: 2 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNAGLNS*PQVLHP
Trigger: CGGGTGGAGCACCTGAGGTCAGGAGTTGAGACCGGC...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR GCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACACTCCTGACCTCAGGTaGTCCACCCGCCTCGCCCTC +
Preference number: 2 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNTPDLR*STRLAL
Trigger: GAGGGCGAGGCGGGTGGAGCACCTGAGGTCAGGAGT...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR GCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACTCTGTCTCTGCAGAGTaGTGGGGGAGCGTGCTCCAT +
Preference number: 2 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNSVSAE*WGSVLH
Trigger: ATGGAGCACGCTCCCCCAGCACTCTGCAGAGACAGA...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR CCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACCTCATTGAGTGCCTGTaGCCAGCGGGGAGCAACTTC +
Preference number: 2 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNLIECL*PAGSNF
Trigger: GAAGTTGCTCCCCGCTGGCCACAGGCACTCAATGAG...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR CCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACCGCTGGACTCCAGCCTaGGAAACAGAGACTCCATCT +
Preference number: 2 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNRWTPA*ETETPS
Trigger: AGATGGAGTCTCTGTTTCCCAGGCTGGAGTCCAGCG...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR TCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACCACTCCAGGATGCAGTaGAGACGGTGGAAGGTTCAT +
Preference number: 2 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNHSRMQ*RRWKVH
Trigger: ATGAACCTTCCACCGTCTTCACTGCATCCTGGAGTG...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR TCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACCGCTGTCACCCAGACTaGATGCAATGGCATGATCTC +
Preference number: 2 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNRCHPD*MQWHDL
Trigger: GAGATCATGCCATTGCATTCAGTCTGGGTGACAGCG...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR CCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACGTAATCCCACCTACTTaGGAGGCTGAGGTGGGAGAA +
Preference number: 2 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNVIPPT*EAEVGE
Trigger: TTCTCCCACCTCAGCCTCCCAAGTAGGTGGGATTAC...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR CCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACATTAGCCAGGCATGGTaGCGTGAGCCTGTAGTACCA +
Preference number: 2 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNISQAW*REPVVP
Trigger: TGGTACTACAGGCTCACGCCACCATGCCTGGCTAAT...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR GCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACTTTTGCACTCCAGGATaGAGTGAAGACGGTGGAAGG +
Preference number: 2 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNFCTPG*SEDGGR
Trigger: CCTTCCACCGTCTTCACTGCATCCTGGAGTGCAAAA...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR GCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACCTTGGCTTCCCAAAGTaGTGGGATTACAGGCGTAAG +
Preference number: 2 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNLGFPK*WDYRRK
Trigger: CTTACGCCTGTAATCCCAGCACTTTGGGAAGCCAAG...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR GCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACGTCACCCAGACTGAATaGAATGGCATGATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNVTQTE*NGMISA
Trigger: AGCCGAGATCATGCCATTGCATTCAGTCTGGGTGAC...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR CCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACAGAAGTCACTATTACTaGCTGGGTGCAGTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNRSHYY*LGAVAH
Trigger: GTGAGCCACTGCACCCAGCCAGTAATAGTGACTTCT...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR CCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACGCCCTCCCAAAGCGCTaGGATTACAGGAATTATCCA +
Preference number: 2 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNALPKR*DYRNYP
Trigger: TGGATAATTCCTGTAATCCCAGCGCTTTGGGAGGGC...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR CCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACTTCTCTAAGTCAGACTaGGGGTCTGTCTCTGCAGAG +
Preference number: 2 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNFSKSD*GSVSAE
Trigger: CTCTGCAGAGACAGACCCCCAGTCTGACTTAGAGAA...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR CCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACAGCCTCTTGAATAGCTaGGATTACAGGCACGCACCA +
Preference number: 2 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNSLLNS*DYRHAP
Trigger: TGGTGCGTGCCTGTAATCCCAGCTATTCAAGAGGCT...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR TCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGGCCGGTCTCAACTCCTaGCCTCAGGTGCTCCACCCG +
Preference number: 2 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKAGLNS*PQVLHP
Trigger: CGGGTGGAGCACCTGAGGTCAGGAGTTGAGACCGGC...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR GCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACACAGGAATTATCCACTaGACCTGGCCAAAACTCCTG +
Preference number: 2 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNTGIIH*TWPKLL
Trigger: CAGGAGTTTTGGCCAGGTGCAGTGGATAATTCCTGT...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR GCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGACTCCTGACCTCAGGTaGTCCACCCGCCTCGCCCTC +
Preference number: 2 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKTPDLR*STRLAL
Trigger: GAGGGCGAGGCGGGTGGAGCACCTGAGGTCAGGAGT...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR GCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGCTGGGGGTCTGTCTCTaGAGAGTGCTGGGGGAGCGT +
Preference number: 2 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKLGVCL*RVLGER
Trigger: ACGCTCCCCCAGCACTCTGCAGAGACAGACCCCCAG...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR TCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACTTGCCCCCAAAGGTGTaGCTTAAAGTTATCTATCAC +
Preference number: 2 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNLPPKV*LKVIYH
Trigger: GTGATAGATAACTTTAAGTCACACCTTTGGGGGCAA...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR TCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGAGGACGAGGCTGCAGTaGGCTGAGATCGCACCACTC +
Preference number: 2 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKRTRLQ*AEIAPL
Trigger: GAGTGGTGCGATCTCAGCTCACTGCAGCCTCGTCCT...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR GCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTCTGGGGGTCTGTCTCTaGAGAGTGCTGGGGGAGCGT +
Preference number: 2 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPLGVCL*RVLGER
Trigger: ACGCTCCCCCAGCACTCTGCAGAGACAGACCCCCAG...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR GCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGCTGGGAGGACGAGGCTaGAGTGAGCTGAGATCGCAC +
Preference number: 2 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKLGGRG*SELRSH
Trigger: GTGCGATCTCAGCTCACTGCAGCCTCGTCCTCCCAG...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR CCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGGTCTCTGCAGAGTGCTaGGGGAGCGTGCTCCATGTG +
Preference number: 2 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKVSAEC*GSVLHV
Trigger: CACATGGAGCACGCTCCCCCAGCACTCTGCAGAGAC...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR TCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGGTGGGCAGACCATCTaGGGTCAGGAGTTCGAGACC +
Preference number: 2 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPGGQTI*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAGATGGTCTGCCCACC...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR TCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTAGGACGAGGCTGCAGTaGGCTGAGATCGCACCACTC +
Preference number: 2 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPRTRLQ*AEIAPL
Trigger: GAGTGGTGCGATCTCAGCTCACTGCAGCCTCGTCCT...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR GCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGAGTGAGCCGAGAATGTaGCACTGCACTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKSEPRM*HCTPAW
Trigger: CCAGGCTGGAGTGCAGTGGCACATTCTCGGCTCACT...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR GCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTCTGGGAGGACGAGGCTaGAGTGAGCTGAGATCGCAC +
Preference number: 2 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPLGGRG*SELRSH
Trigger: GTGCGATCTCAGCTCACTGCAGCCTCGTCCTCCCAG...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR CCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTCTCTGCAGAGTGCTaGGGGAGCGTGCTCCATGTG +
Preference number: 2 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPVSAEC*GSVLHV
Trigger: CACATGGAGCACGCTCCCCCAGCACTCTGCAGAGAC...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR TCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGGGTAAAATAGCTCATTaGGTGCCTGTGGCCAGCGGG +
Preference number: 2 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKGKIAH*VPVASG
Trigger: CCCGCTGGCCACAGGCACTCAATGAGCTATTTTACC...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR TCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGACTCCTGACCTCAAGTaGTCCATCCGCCTTGGCTTC +
Preference number: 2 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKTPDLK*SIRLGF
Trigger: GAAGCCAAGGCGGATGGATCACTTGAGGTCAGGAGT...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR GCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTAGTGAGCCGAGAATGTaGCACTGCACTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPSEPRM*HCTPAW
Trigger: CCAGGCTGGAGTGCAGTGGCACATTCTCGGCTCACT...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR GCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTTCTGTCTCTGCAGAGTaGTGGGGGAGCGTGCTCCAT +
Preference number: 2 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPSVSAE*WGSVLH
Trigger: ATGGAGCACGCTCCCCCAGCACTCTGCAGAGACAGA...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR CAA 90 bp CTCCAACAGAACGTGGGAAATCACATAGACCCAAACAATGGCCCCTaGGGTGACCACTGTATTGCCACCAGATGGACTATCAAGAAATCA +
Preference number: 2 (lower is better)
Translates to: LQQNVGNHIDPNNGP*GDHCIATRWTIKKS
Trigger: TGATTTCTTGATAGTCCATCTGGTGGCAATACAGTGGTCACCCAAGGGGCCATTGTTTGGGTCTATGTGATTTCCCACGTTCTGTTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR TCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGCACTCCAGGATGCAGTaGAGACGGTGGAAGGTTCAT +
Preference number: 2 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKHSRMQ*RRWKVH
Trigger: ATGAACCTTCCACCGTCTTCACTGCATCCTGGAGTG...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR TCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTAGCTGGACCTGGTGGTaGGTACCTGTAATCCCACCT +
Preference number: 2 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPSWTWW*VPVIPP
Trigger: AGGTGGGATTACAGGTACTCACCACCAGGTCCAGCT...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR TCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTACTCCTGACCTCAAGTaGTCCATCCGCCTTGGCTTC +
Preference number: 2 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPTPDLK*SIRLGF
Trigger: GAAGCCAAGGCGGATGGATCACTTGAGGTCAGGAGT...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR TCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGCGCTGTCACCCAGACTaGATGCAATGGCATGATCTC +
Preference number: 2 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKRCHPD*MQWHDL
Trigger: GAGATCATGCCATTGCATTCAGTCTGGGTGACAGCG...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR GCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGCCAGGAGGCGGAGGTTaGAGTGAGTTTAGATTGTGC +
Preference number: 2 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKPGGGG*SEFRLC
Trigger: GCACAATCTAAACTCACTGCAACCTCCGCCTCCTGG...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR GCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGGAGCAACTTCGTCCCTaGACCGCACAAAACTTCACC +
Preference number: 2 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKEQLRP*TAQNFT
Trigger: GGTGAAGTTTTGTGCGGTGCAGGGACGAAGTTGCTC...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR CCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTAATCCCAGAACTTTCTaGGGCCGAGGCAGGCAGATC +
Preference number: 2 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPNPRTF*GRGRQI
Trigger: GATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATT...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR GCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTCCAGGAGGCGGAGGTTaGAGTGAGTTTAGATTGTGC +
Preference number: 2 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPPGGGG*SEFRLC
Trigger: GCACAATCTAAACTCACTGCAACCTCCGCCTCCTGG...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR GCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGAGCAACTTCGTCCCTaGACCGCACAAAACTTCACC +
Preference number: 2 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPEQLRP*TAQNFT
Trigger: GGTGAAGTTTTGTGCGGTGCAGGGACGAAGTTGCTC...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR CCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGAGAAGTCACTATTACTaGCTGGGTGCAGTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKRSHYY*LGAVAH
Trigger: GTGAGCCACTGCACCCAGCCAGTAATAGTGACTTCT...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR TCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGCACAGCGGGCCTTGTaGCTCTTGAGTGGATTTTAT +
Preference number: 2 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPAQRAL*LLSGFY
Trigger: ATAAAATCCACTCAAGAGTCACAAGGCCCGCTGTGC...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR TCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGTTAGAAGAATCTGGCTaGGTTGCTAAGTCTCCCGTG +
Preference number: 2 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKLEESG*VAKSPV
Trigger: CACGGGAGACTTAGCAACTCAGCCAGATTCTTCTAA...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR TCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGGGCAGGCAGATCTCTTaGACCCTGTCTCTACAAAAA +
Preference number: 2 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKGRQIS*TLSLQK
Trigger: TTTTTGTAGAGACAGGGTTCAAGAGATCTGCCTGCC...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR GCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGACAGGAATTATCCACTaGACCTGGCCAAAACTCCTG +
Preference number: 2 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKTGIIH*TWPKLL
Trigger: CAGGAGTTTTGGCCAGGTGCAGTGGATAATTCCTGT...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR CCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGAAAATTAGCCAGGCATaGTGGCGTGAGCCTGTAGTA +
Preference number: 2 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKKISQA*WREPVV
Trigger: TACTACAGGCTCACGCCACCATGCCTGGCTAATTTT...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR CCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGCCCTCCCAAAGCGCTaGGATTACAGGAATTATCCA +
Preference number: 2 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPALPKR*DYRNYP
Trigger: TGGATAATTCCTGTAATCCCAGCGCTTTGGGAGGGC...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR CCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGAGCTTCCTGAGTAGCTaGGATTACAGGTACCCACTA +
Preference number: 2 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKSFLSS*DYRYPL
Trigger: TAGTGGGTACCTGTAATCCCAGCTACTCAGGAAGCT...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR CCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTTTCTCTAAGTCAGACTaGGGGTCTGTCTCTGCAGAG +
Preference number: 2 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPFSKSD*GSVSAE
Trigger: CTCTGCAGAGACAGACCCCCAGTCTGACTTAGAGAA...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR CCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTAGCCTCTTGAATAGCTaGGATTACAGGCACGCACCA +
Preference number: 2 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPSLLNS*DYRHAP
Trigger: TGGTGCGTGCCTGTAATCCCAGCTATTCAAGAGGCT...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR TCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGGCAGGCAGATCTCTTaGACCCTGTCTCTACAAAAA +
Preference number: 2 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPGRQIS*TLSLQK
Trigger: TTTTTGTAGAGACAGGGTTCAAGAGATCTGCCTGCC...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR CCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTAAAATTAGCCAGGCATaGTGGCGTGAGCCTGTAGTA +
Preference number: 2 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPKISQA*WREPVV
Trigger: TACTACAGGCTCACGCCACCATGCCTGGCTAATTTT...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR CCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTAGCTTCCTGAGTAGCTaGGATTACAGGTACCCACTA +
Preference number: 2 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPSFLSS*DYRYPL
Trigger: TAGTGGGTACCTGTAATCCCAGCTACTCAGGAAGCT...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR CCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGGGCCCTCACCTACATTaGTTACTTTCTCTAAGTCAG +
Preference number: 2 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKGPHLH*LLSLSQ
Trigger: CTGACTTAGAGAAAGTAACCAATGTAGGTGAGGGCC...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR TCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGGGGCCTTGTGACTCTTaGGTGGATTTTATTTTTGCA +
Preference number: 2 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKGPCDS*VDFIFA
Trigger: TGCAAAAATAAAATCCACTCAAGAGTCACAAGGCCC...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR TCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGTTGCCCCCAAAGGTGTaGCTTAAAGTTATCTATCAC +
Preference number: 2 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKLPPKV*LKVIYH
Trigger: GTGATAGATAACTTTAAGTCACACCTTTGGGGGCAA...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR CCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGGCCCTCACCTACATTaGTTACTTTCTCTAAGTCAG +
Preference number: 2 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPGPHLH*LLSLSQ
Trigger: CTGACTTAGAGAAAGTAACCAATGTAGGTGAGGGCC...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR TCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGGGCCTTGTGACTCTTaGGTGGATTTTATTTTTGCA +
Preference number: 2 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPGPCDS*VDFIFA
Trigger: TGCAAAAATAAAATCCACTCAAGAGTCACAAGGCCC...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR GCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTAGGTACCCACTAGCATaGCTGGCTGATTTTTGTATT +
Preference number: 2 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPRYPLA*LADFCI
Trigger: AATACAAAAATCAGCCAGGCATGCTAGTGGGTACCT...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR GCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGAGTGGATTTTATTTTTaGACTCCAGGATGCAGTGAA +
Preference number: 2 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKSGFYF*TPGCSE
Trigger: TTCACTGCATCCTGGAGTGCAAAAATAAAATCCACT...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR GCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTAGTGGATTTTATTTTTaGACTCCAGGATGCAGTGAA +
Preference number: 2 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPSGFYF*TPGCSE
Trigger: TTCACTGCATCCTGGAGTGCAAAAATAAAATCCACT...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR TCA 72 bp GTGGCCAGTGCCTACAGTCCCAGCTACAAAGTGGGCTaGGATGGGAGGATTGCTTGGGCCTGGGAGGACGAG +
Preference number: 3 (lower is better)
Translates to: VASAYSPSYKVG*DGRIAWAWEDE
Trigger: CTCGTCCTCCCAGGCCCAAGCAATCCTCCCATCTCAGCCCACTTTGTAGCTGGGACTGTAGGCACTGGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR CCA 72 bp TCTAAGTCAGACTGGGGGTCTGTCTCTGCAGAGTGCTaGGGGAGCGTGCTCCATGTGATGCACAGGAGCCCC +
Preference number: 3 (lower is better)
Translates to: SKSDWGSVSAEC*GSVLHVMHRSP
Trigger: GGGGCTCCTGTGCATCACATGGAGCACGCTCCCCCAGCACTCTGCAGAGACAGACCCCCAGTCTGACTTAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR CAA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACGGGATGGGAGGTTACTaGGCCAACCCAGAAACCCTA +
Preference number: 3 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNGMGGY*ANPETL
Trigger: TAGGGTTTCTGGGTTGGCCAAGTAACCTCCCATCCC...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR CCA 72 bp CCCTCACCTACATTGGTTACTTTCTCTAAGTCAGACTaGGGGTCTGTCTCTGCAGAGTGCTGGGGGAGCGTG +
Preference number: 3 (lower is better)
Translates to: PSPTLVTFSKSD*GSVSAECWGSV
Trigger: CACGCTCCCCCAGCACTCTGCAGAGACAGACCCCCAGTCTGACTTAGAGAAAGTAACCAATGTAGGTGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR CAA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGAGATGGGAGGATTGCTaGGGCCTGGGAGGACGAGGC +
Preference number: 3 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKRWEDC*GLGGRG
Trigger: GCCTCGTCCTCCCAGGCCCAAGCAATCCTCCCATCT...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR CAA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGGCTGAGATGGGAGGATaGCTTGGGCCTGGGAGGACG +
Preference number: 3 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKAEMGG*LGPGRT
Trigger: CGTCCTCCCAGGCCCAAGCAATCCTCCCATCTCAGC...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR CAA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTAGATGGGAGGATTGCTaGGGCCTGGGAGGACGAGGC +
Preference number: 3 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPRWEDC*GLGGRG
Trigger: GCCTCGTCCTCCCAGGCCCAAGCAATCCTCCCATCT...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR CAA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGCTGAGATGGGAGGATaGCTTGGGCCTGGGAGGACG +
Preference number: 3 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPAEMGG*LGPGRT
Trigger: CGTCCTCCCAGGCCCAAGCAATCCTCCCATCTCAGC...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR CAA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACCACGCACCACCACAGTaGGCTAATTTTTGTATTTTT +
Preference number: 3 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNHAPPQ*ANFCIF
Trigger: AAAAATACAAAAATTAGCCAACTGTGGTGGTGCGTG...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR CCA 72 bp GGTGCTGGCTATTCGGTTTTAAGCCCTTCCAATGGGTaGAGGAGAGTAAACCAAAATCCCAGAAAGACTAGC +
Preference number: 3 (lower is better)
Translates to: GAGYSVLSPSNG*RRVNQNPRKTS
Trigger: GCTAGTCTTTCTGGGATTTTGGTTTACTCTCCTCCACCCATTGGAAGGGCTTAAAACCGAATAGCCAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR CAA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGGGATGGGAGGTTACTaGGCCAACCCAGAAACCCTA +
Preference number: 3 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPGMGGY*ANPETL
Trigger: TAGGGTTTCTGGGTTGGCCAAGTAACCTCCCATCCC...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR TCA 72 bp GTGAAACCGATTATGCACAGCGGGCCTTGTGACTCTTaGGTGGATTTTATTTTTGCACTCCAGGATGCAGTG +
Preference number: 3 (lower is better)
Translates to: VKPIMHSGPCDS*VDFIFALQDAV
Trigger: CACTGCATCCTGGAGTGCAAAAATAAAATCCACTCAAGAGTCACAAGGCCCGCTGTGCATAATCGGTTTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR CCA 72 bp ATCTGCAGTGATAGCTACAAAATGCAGAGCTGTGCTTaGTGCTGGCTATTCGGTTTTAAGCCCTTCCAATGG +
Preference number: 3 (lower is better)
Translates to: ICSDSYKMQSCA*CWLFGFKPFQW
Trigger: CCATTGGAAGGGCTTAAAACCGAATAGCCAGCACCAAGCACAGCTCTGCATTTTGTAGCTATCACTGCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR CCA 72 bp AATGGCCCCTTGGGTGACCACTGTATTGCCACCAGATaGACTATCAAGAAATCATCTGCAGTGATAGCTACA +
Preference number: 3 (lower is better)
Translates to: NGPLGDHCIATR*TIKKSSAVIAT
Trigger: TGTAGCTATCACTGCAGATGATTTCTTGATAGTCCATCTGGTGGCAATACAGTGGTCACCCAAGGGGCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR CAA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTAAGAATCTGGCTGAGTaGCTAAGTCTCCCGTGTGGT +
Preference number: 3 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPKNLAE*LSLPCG
Trigger: ACCACACGGGAGACTTAGCAACTCAGCCAGATTCTT...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR CAA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGCAGTTTAATGCGAAATaGACTAGGCTGAGCACAGTA +
Preference number: 3 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKQFNAK*TRLSTV
Trigger: TACTGTGCTCAGCCTAGTCAATTTCGCATTAAACTG...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR-3UTR CAA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGCACGCACCACCACAGTaGGCTAATTTTTGTATTTTT +
Preference number: 3 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKHAPPQ*ANFCIF
Trigger: AAAAATACAAAAATTAGCCAACTGTGGTGGTGCGTG...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR TCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACGGGCAGCCATGGCGGTaGCAGCGGGCGCACCAAGCA +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNGQPWR*QRAHQA
Trigger: TGCTTGGTGCGCCCGCTGTCACCGCCATGGCTGCCC...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340344.4
CDS-3UTR GCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACGGGCTGGCTCCTGTGTaGCGCCTCGGTCGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNGLAPV*RLGRPL
Trigger: CAGGGGACGACCGAGGCGGCACACAGGAGCCAGCCC...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR GCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACGCCCCGGCTCGTCCTTaGCGCAGCAAACACGGGGCA +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNAPARP*RSKHGA
Trigger: TGCCCCGTGTTTGCTGCGGCAAGGACGAGCCGGGGC...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR CCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACCCGCCCCAGGAGGACTaGCTTGCAGCTGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNPPQED*LAAAPL
Trigger: CAGAGGGGCAGCTGCAAGCCAGTCCTCCTGGGGCGG...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR CCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACGGGGCCGCCTTGCGCTaGGGCTCTGGCACGGGTTTT +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNGAALR*GSGTGF
Trigger: AAAACCCGTGCCAGAGCCCCAGCGCAAGGCGGCCCC...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR CCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACCGGCTCAGCAGGCACTaGGGCTGGCTCCTGTGTGCC +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNRLSRH*GWLLCA
Trigger: GGCACACAGGAGCCAGCCCCAGTGCCTGCTGAGCCG...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR GCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACTTCCAGATGCCCCTCTaGCGCCCCAGGAGGACTGGC +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNFQMPL*RPRRTG
Trigger: GCCAGTCCTCCTGGGGCGGCAGAGGGGCATCTGGAA...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR GCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACACAGGCGTGAGGCACTaGGCCCGGCCTCCAACAGAA +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNTGVRH*ARPPTE
Trigger: TTCTGTTGGAGGCCGGGCGCAGTGCCTCACGCCTGT...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR CCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACCTGAGGTTTCCTTTCTaGGCAGGGGAGGGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNLRFPF*AGEGPP
Trigger: AGGCGGCCCCTCCCCTGCCCAGAAAGGAAACCTCAG...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR CCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACCGGCTGCATCTTCCATaGCCTCGCCCTCGGCCTCAA +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNRLHLP*PRPRPQ
Trigger: TTGAGGCCGAGGGCGAGGCCATGGAAGATGCAGCCG...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR TCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACAGGACGAGGCTGCAGTaGGCTGAGATCGCACCACTC +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNRTRLQ*AEIAPL
Trigger: GAGTGGTGCGATCTCAGCTCACTGCAGCCTCGTCCT...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR GCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACACGGGTTTTTCCAGATaGCCCTCTGCCGCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNTGFSR*PSAAPG
Trigger: TCCTGGGGCGGCAGAGGGGCATCTGGAAAAACCCGT...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR TCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACCGGCCTGAGGAGGGCTaGGGCATCCTGAATTTTGAG +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNRPEEG*GILNFE
Trigger: CTCAAAATTCAGGATGCCTCAGCCCTCCTCAGGCCG...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR TCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACCAATGGCCCCTTGGGTaGCCACTGTATTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNQWPLG*PLYCHQ
Trigger: CTGGTGGCAATACAGTGGTCACCCAAGGGGCCATTG...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR GCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACAGTGAGCCGAGAATGTaGCACTGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNSEPRM*HCTPAW
Trigger: CCAGGCTGGAGTGCAGTGGCACATTCTCGGCTCACT...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR GCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACTCGCCCAGGCTGGAGTaGAGTGAGGCTATCTCGGTT +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNSPRLE*SEAISV
Trigger: AACCGAGATAGCCTCACTGCACTCCAGCCTGGGCGA...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR TCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACACTCCTGACCTCAAGTaGTCCATCCGCCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNTPDLK*SIRLGF
Trigger: GAAGCCAAGGCGGATGGATCACTTGAGGTCAGGAGT...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR TCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACATTTTCCCTGCCTTCTaGTGGCTTAGCAGGGGACCC +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNIFPAF*WLSRGP
Trigger: GGGTCCCCTGCTAAGCCATCAGAAGGCAGGGAAAAT...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR TCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACTATTCCCTGCGTCCCTaGGGTTTCCTTTCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNYSLRP*GFLSGQ
Trigger: CTGCCCAGAAAGGAAACCTCAGGGACGCAGGGAATA...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR CCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACAATCCCAGAACTTTCTaGGGCCGAGGCAGGCAGATC +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNNPRTF*GRGRQI
Trigger: GATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATT...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR CCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACAATTCAGCTGCTGTCTaGGTGGCTAGGAGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNNSAAV*VARSLP
Trigger: GGGCAAGCTCCTAGCCACCCAGACAGCAGCTGAATT...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR TCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACTCGAGGAGTGACCTCTaGAACGTCAGCCTCATCATC +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNSRSDL*NVSLII
Trigger: GATGATGAGGCTGACGTTTCAGAGGTCACTCCTCGA...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR GCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACCCAGGAGGCGGAGGTTaGAGTGAGTTTAGATTGTGC +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNPGGGG*SEFRLC
Trigger: GCACAATCTAAACTCACTGCAACCTCCGCCTCCTGG...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR CCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACCCGTGTTATCCAGGATaGTCTCGATCTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNPCYPG*SRSPDL
Trigger: GAGGTCAGGAGATCGAGACCATCCTGGATAACACGG...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR TCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACAGGGCTGAGGCATCCTaGATTTTGAGAGTTCGAGGT +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNRAEAS*ILRVRG
Trigger: ACCTCGAACTCTCAAAATTCAGGATGCCTCAGCCCT...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR TCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACCACCTGACGAGCTTCTaGATCAGAGCCCTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNHLTSF*IRALFS
Trigger: AGAAAACAGGGCTCTGATTCAGAAGCTCGTCAGGTG...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR GCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGGCCCCGGCTCGTCCTTaGCGCAGCAAACACGGGGCA +
Preference number: 4 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKAPARP*RSKHGA
Trigger: TGCCCCGTGTTTGCTGCGGCAAGGACGAGCCGGGGC...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR CCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACCTGGTGGGGCTTCTCTaGATCAGTAATGTCCACATG +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNLVGLL*ISNVHM
Trigger: CATGTGGACATTACTGATCCAGAGAAGCCCCACCAG...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR CCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACCCTTTCTTCTTTGGCTaGTGGGGCTTCTCTGGATCA +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNPFFFG*WGFSGS
Trigger: TGATCCAGAGAAGCCCCACCAGCCAAAGAAGAAAGG...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR CCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACGGGCATTGTGGTTTTTaGTCTCGCATTTTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNGHCGF*SRIFPA
Trigger: GGCAGGGAAAATGCGAGACCAAAAACCACAATGCCC...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR TCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACGGCAGGCAGATCTCTTaGACCCTGTCTCTACAAAAA +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNGRQIS*TLSLQK
Trigger: TTTTTGTAGAGACAGGGTTCAAGAGATCTGCCTGCC...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR GCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACCTCAAGCTTCAGCGCTaGTGTCTTTTCATGGAAACC +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNLKLQR*CLFMET
Trigger: GGTTTCCATGAAAAGACAGCAGCGCTGAAGCTTGAG...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR GCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTCCCCTGGCGCGGCTaGATCTTCCATGGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPVPWRG*IFHGLA
Trigger: GGCGAGGCCATGGAAGATGCAGCCGCGCCAGGGGAC...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR CCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACAGCTTCCTGAGTAGCTaGGATTACAGGTACCCACTA +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNSFLSS*DYRYPL
Trigger: TAGTGGGTACCTGTAATCCCAGCTACTCAGGAAGCT...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR CCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACATGCAGAGCTGTGCTTaGTGCTGGCTATTCGGTTTT +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNMQSCA*CWLFGF
Trigger: AAAACCGAATAGCCAGCACCAAGCACAGCTCTGCAT...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR CCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACTTCTTCTTTGGCTGGTaGGGCTTCTCTGGATCAGTA +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNFFFGW*GFSGSV
Trigger: TACTGATCCAGAGAAGCCCCACCAGCCAAAGAAGAA...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR CCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTCAACACAGCAGGCGCTaGGCTGCCCTTCGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPQHSRR*AALRWR
Trigger: GCGCCACCGAAGGGCAGCCCAGCGCCTGCTGTGTTG...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR TCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGCCGGTCTCAACTCCTaGCCTCAGGTGCTCCACCCG +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPAGLNS*PQVLHP
Trigger: CGGGTGGAGCACCTGAGGTCAGGAGTTGAGACCGGC...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR GCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACCTAAGAAGGTGTACGTaGTGTAGTCATGATGCTGCA +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNLRRCT*CSHDAA
Trigger: TGCAGCATCATGACTACAGCACGTACACCTTCTTAG...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR GCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTACTCCTGACCTCAGGTaGTCCACCCGCCTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPTPDLR*STRLAL
Trigger: GAGGGCGAGGCGGGTGGAGCACCTGAGGTCAGGAGT...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR GCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGACAGGCGTGAGGCACTaGGCCCGGCCTCCAACAGAA +
Preference number: 4 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKTGVRH*ARPPTE
Trigger: TTCTGTTGGAGGCCGGGCGCAGTGCCTCACGCCTGT...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR CCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACGGCCCTCACCTACATTaGTTACTTTCTCTAAGTCAG +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNGPHLH*LLSLSQ
Trigger: CTGACTTAGAGAAAGTAACCAATGTAGGTGAGGGCC...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR CCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACAGCCCTTCCAATGGGTaGAGGAGAGTAAACCAAAAT +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNSPSNG*RRVNQN
Trigger: ATTTTGGTTTACTCTCCTCCACCCATTGGAAGGGCT...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR CCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGCCTCGGTCGTCCCCTaGCGCGGCTGCATCTTCCAT +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPASVVP*RGCIFH
Trigger: ATGGAAGATGCAGCCGCGCCAGGGGACGACCGAGGC...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR TCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGGGTGGGCAGACCATCTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKGGQTI*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAGATGGTCTGCCCACC...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR TCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACAACTCTTCATCTACTTaGGATCTGGGCATTGTGGTT +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNNSSST*DLGIVV
Trigger: AACCACAATGCCCAGATCTCAAGTAGATGAAGAGTT...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR GCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACAGGTACCCACTAGCATaGCTGGCTGATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNRYPLA*LADFCI
Trigger: AATACAAAAATCAGCCAGGCATGCTAGTGGGTACCT...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR GCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGTGCTCTGGCCTCTTCTaGCAACACAGCAGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKCSGLF*QHSRRW
Trigger: CCAGCGCCTGCTGTGTTGGCAGAAGAGGCCAGAGCA...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR GCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGGACTGGCTTGCAGCTaGCCCTCTGCTCTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPGLACS*PSALAS
Trigger: AGAGGCCAGAGCAGAGGGGCAGCTGCAAGCCAGTCC...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR GCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTCCAGGAGGACTGGCTTaGAGCTGCCCCTCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPPGGLA*SCPSAL
Trigger: CAGAGCAGAGGGGCAGCTGCAAGCCAGTCCTCCTGG...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR CCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGCAGCTGCTGTCTGGGTaGCTAGGAGCTTGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKQLLSG*LGACPS
Trigger: AGAGGGGCAAGCTCCTAGCCACCCAGACAGCAGCTG...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR CCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACCATCTACTTGAGATCTaGGCATTGTGGTTTTTGGTC +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNHLLEI*ALWFLV
Trigger: GACCAAAAACCACAATGCCCAGATCTCAAGTAGATG...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR CCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACGCTGCTGTCTTTTCATaGAAACCGTGGTTATTCTCA +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNAAVFS*KPWLFS
Trigger: TGAGAATAACCACGGTTTCCATGAAAAGACAGCAGC...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR TCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGCAATGGCCCCTTGGGTaGCCACTGTATTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKQWPLG*PLYCHQ
Trigger: CTGGTGGCAATACAGTGGTCACCCAAGGGGCCATTG...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR TCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGGGAGCTGGAAGAGGATaGAGACGAAGGCGACGTCAC +
Preference number: 4 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKGAGRG*RRRRRH
Trigger: GTGACGTCGCCTTCGTCTTCATCCTCTTCCAGCTCC...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR GCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGGCAATCTCCACTCACTaGAGCCTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKAISTH*SLCLLG
Trigger: ACCCAGGAGGCAGAGGCTGCAGTGAGTGGAGATTGC...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR GCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACGAACTGTCTCCAAATTaGTTGGTGGTATCTGATCTT +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNELSPN*LVVSDL
Trigger: AAGATCAGATACCACCAAGCAATTTGGAGACAGTTC...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR CCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGCTCATTGAGTGCCTGTaGCCAGCGGGGAGCAACTTC +
Preference number: 4 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKLIECL*PAGSNF
Trigger: GAAGTTGCTCCCCGCTGGCCACAGGCACTCAATGAG...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
3UTR CAA 72 bp AACGTGGGAAATCACATAGACCCAAACAATGGCCCCTaGGGTGACCACTGTATTGCCACCAGATGGACTATC +
Preference number: 4 (lower is better)
Translates to: NVGNHIDPNNGP*GDHCIATRWTI
Trigger: GATAGTCCATCTGGTGGCAATACAGTGGTCACCCAAGGGGCCATTGTTTGGGTCTATGTGATTTCCCACGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR TCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTCGGCCTGAGGAGGGCTaGGGCATCCTGAATTTTGAG +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPRPEEG*GILNFE
Trigger: CTCAAAATTCAGGATGCCTCAGCCCTCCTCAGGCCG...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR TCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTCAGGCTGGAGTGCAGTaGGGCTATCTCGGTTCACTG +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPQAGVQ*GYLGSL
Trigger: CAGTGAACCGAGATAGCCTCACTGCACTCCAGCCTG...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR TCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGGAACCCCTTCATCTGTaGATAGCACGCTGCCACTGG +
Preference number: 4 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKEPLHL*IARCHW
Trigger: CCAGTGGCAGCGTGCTATTCACAGATGAAGGGGTTC...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR GCA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACAGTGGATTTTATTTTTaGACTCCAGGATGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNSGFYF*TPGCSE
Trigger: TTCACTGCATCCTGGAGTGCAAAAATAAAATCCACT...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR GCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGCAATCTCCACTCACTaGAGCCTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPAISTH*SLCLLG
Trigger: ACCCAGGAGGCAGAGGCTGCAGTGAGTGGAGATTGC...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR GCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTTCGCCCAGGCTGGAGTaGAGTGAGGCTATCTCGGTT +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPSPRLE*SEAISV
Trigger: AACCGAGATAGCCTCACTGCACTCCAGCCTGGGCGA...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR GCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGGGTGGCTAGGAGCTTaGCCCTCTCCTTTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPGWLGA*PSPLVP
Trigger: TGGAACCAAAGGAGAGGGGCAAGCTCCTAGCCACCC...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR GCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTTTGCAGCTGCCCCTCTaGTCTGGCCTCTTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPLQLPL*SGLFCQ
Trigger: TTGGCAGAAGAGGCCAGAGCAGAGGGGCAGCTGCAA...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR CCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGAACACCTGGGCTTCCTaGAGCATAGTCTTCAGCGCC +
Preference number: 4 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKNTWAS*SIVFSA
Trigger: GGCGCTGAAGACTATGCTCCAGGAAGCCCAGGTGTT...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR CCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGCTCTTTCGCCCAGGCTaGAGTGCAGTGAGGCTATCT +
Preference number: 4 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKLFRPG*SAVRLS
Trigger: AGATAGCCTCACTGCACTCCAGCCTGGGCGAAAGAG...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR CCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTCTTGCGCTGGGGCTCTaGCACGGGTTTTTCCAGATG +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPLALGL*HGFFQM
Trigger: CATCTGGAAAAACCCGTGCCAGAGCCCCAGCGCAAG...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR CCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGTGTCCACCCTTCAGGTaGCCTTCTATTCCCTGCGTC +
Preference number: 4 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKCPPFR*PSIPCV
Trigger: GACGCAGGGAATAGAAGGCCACCTGAAGGGTGGACA...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR TCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGGTAAAATAGCTCATTaGGTGCCTGTGGCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPGKIAH*VPVASG
Trigger: CCCGCTGGCCACAGGCACTCAATGAGCTATTTTACC...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR TCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTTCACCACTCGAGGAGTaGCCTCTGAAACGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPSPLEE*PLKRQP
Trigger: AGGCTGACGTTTCAGAGGTCACTCCTCGAGTGGTGA...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR GCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGCTGATCTTCCACGATTaGCTGTCCACCCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKLIFHD*LSTLQV
Trigger: CACCTGAAGGGTGGACAGGCAATCGTGGAAGATCAG...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR CCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTAACACCTGGGCTTCCTaGAGCATAGTCTTCAGCGCC +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPNTWAS*SIVFSA
Trigger: GGCGCTGAAGACTATGCTCCAGGAAGCCCAGGTGTT...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR CCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGAGTCCTCGAAACACCTaGGCTTCCTGGAGCATAGTC +
Preference number: 4 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKSPRNT*ASWSIV
Trigger: GACTATGCTCCAGGAAGCCCAGGTGTTTCGAGGACT...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR CCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTCGCTGGACTCCAGCCTaGGAAACAGAGACTCCATCT +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPRWTPA*ETETPS
Trigger: AGATGGAGTCTCTGTTTCCCAGGCTGGAGTCCAGCG...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR CCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGATTAGCCAGGCATGGTaGCGTGAGCCTGTAGTACCA +
Preference number: 4 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKISQAW*REPVVP
Trigger: TGGTACTACAGGCTCACGCCACCATGCCTGGCTAAT...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR CCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGCCGTGTTATCCAGGATaGTCTCGATCTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKPCYPG*SRSPDL
Trigger: GAGGTCAGGAGATCGAGACCATCCTGGATAACACGG...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR TCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTCACTCCAGGATGCAGTaGAGACGGTGGAAGGTTCAT +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPHSRMQ*RRWKVH
Trigger: ATGAACCTTCCACCGTCTTCACTGCATCCTGGAGTG...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR TCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTCGCTGTCACCCAGACTaGATGCAATGGCATGATCTC +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPRCHPD*MQWHDL
Trigger: GAGATCATGCCATTGCATTCAGTCTGGGTGACAGCG...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR TCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTACTTTCCGACCCACCTaGCGAGCTTCTGAATCAGAG +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPTFRPT*RASESE
Trigger: CTCTGATTCAGAAGCTCGTCAGGTGGGTCGGAAAGT...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR GCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGGTCACCCAGACTGAATaGAATGGCATGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKVTQTE*NGMISA
Trigger: AGCCGAGATCATGCCATTGCATTCAGTCTGGGTGAC...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR GCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGGAGTTTTGCTGTTGTTaGCCAGGCTGTAGTGCGATG +
Preference number: 4 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKEFCCC*PGCSAM
Trigger: CATCGCACTACAGCCTGGGCAACAACAGCAAAACTC...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR GCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGTGGCCTTCTATTCCCTaGGTCCCTGAGGTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKWPSIP*VPEVSF
Trigger: AAAGGAAACCTCAGGGACGCAGGGAATAGAAGGCCA...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR CCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTAGTCCTCGAAACACCTaGGCTTCCTGGAGCATAGTC +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPSPRNT*ASWSIV
Trigger: GACTATGCTCCAGGAAGCCCAGGTGTTTCGAGGACT...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR CCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAATCCCACCTACTTaGGAGGCTGAGGTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPVIPPT*EAEVGE
Trigger: TTCTCCCACCTCAGCCTCCCAAGTAGGTGGGATTAC...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR CCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTATTAGCCAGGCATGGTaGCGTGAGCCTGTAGTACCA +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPISQAW*REPVVP
Trigger: TGGTACTACAGGCTCACGCCACCATGCCTGGCTAAT...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR CCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGTTCTCTAAGTCAGACTaGGGGTCTGTCTCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKFSKSD*GSVSAE
Trigger: CTCTGCAGAGACAGACCCCCAGTCTGACTTAGAGAA...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR CCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGAGCTGTGCTTGGTGCTaGCTATTCGGTTTTAAGCCC +
Preference number: 4 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKSCAWC*LFGFKP
Trigger: GGGCTTAAAACCGAATAGCCAGCACCAAGCACAGCT...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR TCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGTTGAGAGTTCGAGGTTaGGGTCTAAGAAGGTGTACG +
Preference number: 4 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKLRVRG*GLRRCT
Trigger: CGTACACCTTCTTAGACCTCAACCTCGAACTCTCAA...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR TCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGAGGCATCCTGAATTTTaGGAGTTCGAGGTTGAGGTC +
Preference number: 4 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKRHPEF*EFEVEV
Trigger: GACCTCAACCTCGAACTCTCAAAATTCAGGATGCCT...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR TCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTAGGGCTGAGGCATCCTaGATTTTGAGAGTTCGAGGT +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPRAEAS*ILRVRG
Trigger: ACCTCGAACTCTCAAAATTCAGGATGCCTCAGCCCT...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR GCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTCTTGGCTTCCCAAAGTaGTGGGATTACAGGCGTAAG +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPLGFPK*WDYRRK
Trigger: CTTACGCCTGTAATCCCAGCACTTTGGGAAGCCAAG...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR GCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTCACCCAGACTGAATaGAATGGCATGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPVTQTE*NGMISA
Trigger: AGCCGAGATCATGCCATTGCATTCAGTCTGGGTGAC...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR GCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGAGTTTTGCTGTTGTTaGCCAGGCTGTAGTGCGATG +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPEFCCC*PGCSAM
Trigger: CATCGCACTACAGCCTGGGCAACAACAGCAAAACTC...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR GCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTCAAAATGCAGAGCTGTaGTTGGTGCTGGCTATTCGG +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPQNAEL*LVLAIR
Trigger: CCGAATAGCCAGCACCAAGCACAGCTCTGCATTTTG...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR CCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTAGCTGTGCTTGGTGCTaGCTATTCGGTTTTAAGCCC +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPSCAWC*LFGFKP
Trigger: GGGCTTAAAACCGAATAGCCAGCACCAAGCACAGCT...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR CCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTCAAACAATGGCCCCTTaGGTGACCACTGTATTGCCA +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPQTMAP*VTTVLP
Trigger: TGGCAATACAGTGGTCACCCAAGGGGCCATTGTTTG...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR TCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGCTTTTCACTCTTCCCTaGTTCCGCAGACAAAGAAAC +
Preference number: 4 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKLFTLP*FRRQRN
Trigger: GTTTCTTTGTCTGCGGAATCAGGGAAGAGTGAAAAG...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR TCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTTTGAGAGTTCGAGGTTaGGGTCTAAGAAGGTGTACG +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPLRVRG*GLRRCT
Trigger: CGTACACCTTCTTAGACCTCAACCTCGAACTCTCAA...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR TCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTTTAGAAGAATCTGGCTaGGTTGCTAAGTCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPLEESG*VAKSPV
Trigger: CACGGGAGACTTAGCAACTCAGCCAGATTCTTCTAA...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR TCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTTTGCTTGGTGGTATCTaGTCTTCCACGATTGCCTGT +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPLLGGI*SSTIAC
Trigger: ACAGGCAATCGTGGAAGATCAGATACCACCAAGCAA...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR GCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTACAGGAATTATCCACTaGACCTGGCCAAAACTCCTG +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPTGIIH*TWPKLL
Trigger: CAGGAGTTTTGGCCAGGTGCAGTGGATAATTCCTGT...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR GCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGGTGATAGCTACAAAATaGAGAGCTGTGCTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKVIATK*RAVLGA
Trigger: AGCACCAAGCACAGCTCTGCATTTTGTAGCTATCAC...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR GCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGTCCACATGCGGCTTCTaGAGCAAGGTTTTCTCTTTT +
Preference number: 4 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKSTCGF*SKVFSF
Trigger: AAAAGAGAAAACCTTGCTGCAGAAGCCGCATGTGGA...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR CCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGTTTAAGCCCTTCCAATaGGTGGAGGAGAGTAAACCA +
Preference number: 4 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKFKPFQ*VEESKP
Trigger: TGGTTTACTCTCCTCCACCCATTGGAAGGGCTTAAA...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR TCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTCTTTTCACTCTTCCCTaGTTCCGCAGACAAAGAAAC +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPLFTLP*FRRQRN
Trigger: GTTTCTTTGTCTGCGGAATCAGGGAAGAGTGAAAAG...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR TCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTCAGAGCCCTGTTTTCTaGATGGAGACAGAACTTTCT +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPQSPVF*METELS
Trigger: AGAAAGTTCTGTCTCCATTCAGAAAACAGGGCTCTG...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR GCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTCTAAGAAGGTGTACGTaGTGTAGTCATGATGCTGCA +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPLRRCT*CSHDAA
Trigger: TGCAGCATCATGACTACAGCACGTACACCTTCTTAG...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR GCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTGATAGCTACAAAATaGAGAGCTGTGCTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPVIATK*RAVLGA
Trigger: AGCACCAAGCACAGCTCTGCATTTTGTAGCTATCAC...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR CCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTAGCCCTTCCAATGGGTaGAGGAGAGTAAACCAAAAT +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPSPSNG*RRVNQN
Trigger: ATTTTGGTTTACTCTCCTCCACCCATTGGAAGGGCT...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR CCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGAACCCTGATTTTGTGTaGACAGGTAAGGGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKNPDFV*TGKGPL
Trigger: TAAAGGACCCTTACCTGTCCACACAAAATCAGGGTT...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR CCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGTGTCTCCAAATTGCTTaGTGGTATCTGATCTTCCAC +
Preference number: 4 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKCLQIA*WYLIFH
Trigger: GTGGAAGATCAGATACCACCAAGCAATTTGGAGACA...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR TCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGTACCAAAGTCTTTCTTaGCAAAAATTTCGGAACCCC +
Preference number: 4 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKYQSLS*QKFRNP
Trigger: GGGGTTCCGAAATTTTTGTCAAGAAAGACTTTGGTA...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR CCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGAGATCTGGGCATTGTaGTTTTTGGTCTCGCATTTT +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPEIWAL*FLVSHF
Trigger: AAAATGCGAGACCAAAAACCACAATGCCCAGATCTC...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR CCA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTCTCCAAATTGCTTGGTaGTATCTGATCTTCCACGAT +
Preference number: 4 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPLQIAW*YLIFHD
Trigger: ATCGTGGAAGATCAGATACCACCAAGCAATTTGGAG...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR CCA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGTGTATTGCCACCAGATaGACTATCAAGAAATCATCT +
Preference number: 4 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKCIATR*TIKKSS
Trigger: AGATGATTTCTTGATAGTCCATCTGGTGGCAATACA...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS TCA 90 bp CCCCGGCTCGTCCTTGCCGCAGCAAACACGGGGCAGCCATGGCGGTaGCAGCGGGCGCACCAAGCAGGGCCACAGCAGCTGCGCGCGCAC +
Preference number: 5 (lower is better)
Translates to: PRLVLAAANTGQPWR*QRAHQAGPQQLRAH
Trigger: GTGCGCGCGCAGCTGCTGTGGCCCTGCTTGGTGCGCCCGCTGTCACCGCCATGGCTGCCCCGTGTTTGCTGCGGCAAGGACGAGCCGGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340344.4
CDS GCA 90 bp TGGGGCTGGCTCCTGTGTGCCGCCTCGGTCGTCCCCTGGCGCGGCTaGATCTTCCATGGCCTCGCCCTCGGCCTCAAGCTTCAGCGCTGC +
Preference number: 5 (lower is better)
Translates to: WGWLLCAASVVPWRG*IFHGLALGLKLQRC
Trigger: GCAGCGCTGAAGCTTGAGGCCGAGGGCGAGGCCATGGAAGATGCAGCCGCGCCAGGGGACGACCGAGGCGGCACACAGGAGCCAGCCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354250.7
ENST00000460259.1
CDS CCA 90 bp AGCAGGCACTGGGGCTGGCTCCTGTGTGCCGCCTCGGTCGTCCCCTaGCGCGGCTGCATCTTCCATGGCCTCGCCCTCGGCCTCAAGCTT +
Preference number: 5 (lower is better)
Translates to: SRHWGWLLCAASVVP*RGCIFHGLALGLKL
Trigger: AAGCTTGAGGCCGAGGGCGAGGCCATGGAAGATGCAGCCGCGCCAGGGGACGACCGAGGCGGCACACAGGAGCCAGCCCCAGTGCCTGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354250.7
ENST00000460259.1
CDS CCA 90 bp CCTGTGTGCCGCCTCGGTCGTCCCCTGGCGCGGCTGCATCTTCCATaGCCTCGCCCTCGGCCTCAAGCTTCAGCGCTGCTGTCTTTTCAT +
Preference number: 5 (lower is better)
Translates to: PVCRLGRPLARLHLP*PRPRPQASALLSFH
Trigger: ATGAAAAGACAGCAGCGCTGAAGCTTGAGGCCGAGGGCGAGGCCATGGAAGATGCAGCCGCGCCAGGGGACGACCGAGGCGGCACACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354250.7
ENST00000460259.1
CDS-3UTR CAA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACCGCCCCGGCTCGTCCTaGCCGCAGCAAACACGGGGC +
Preference number: 5 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNRPGSS*PQQTRG
Trigger: GCCCCGTGTTTGCTGCGGCAAGGACGAGCCGGGGCG...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS GCA 90 bp GCCCCTCTGCTCTGGCCTCTTCTGCCAACACAGCAGGCGCTGGGCTaGCCTTCGGTGGCGCAGACAACCCTGATTTTGTGTGGACAGGTA +
Preference number: 5 (lower is better)
Translates to: APLLWPLLPTQQALG*PSVAQTTLILCGQV
Trigger: TACCTGTCCACACAAAATCAGGGTTGTCTGCGCCACCGAAGGGCAGCCCAGCGCCTGCTGTGTTGGCAGAAGAGGCCAGAGCAGAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354250.7
ENST00000460259.1
CDS GCA 90 bp TCTTCCACGATTGCCTGTCCACCCTTCAGGTGGCCTTCTATTCCCTaGGTCCCTGAGGTTTCCTTTCTGGGCAGGGGAGGGGCCGCCTTG +
Preference number: 5 (lower is better)
Translates to: SSTIACPPFRWPSIP*VPEVSFLGRGGAAL
Trigger: CAAGGCGGCCCCTCCCCTGCCCAGAAAGGAAACCTCAGGGACGCAGGGAATAGAAGGCCACCTGAAGGGTGGACAGGCAATCGTGGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354250.7
ENST00000460259.1
CDS-3UTR CAA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACAGATGGGAGGATTGCTaGGGCCTGGGAGGACGAGGC +
Preference number: 5 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNRWEDC*GLGGRG
Trigger: GCCTCGTCCTCCCAGGCCCAAGCAATCCTCCCATCT...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR CAA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACGCTGAGATGGGAGGATaGCTTGGGCCTGGGAGGACG +
Preference number: 5 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNAEMGG*LGPGRT
Trigger: CGTCCTCCCAGGCCCAAGCAATCCTCCCATCTCAGC...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS TCA 90 bp TTGGCTATCCCCGGCCAGGAGGCTGAGTTCTGGAGGCCAGAAGTCTaGAGTCAGGGTGTTGGCTGGGCCACGCTCCTTCTGAAAGGTCTA +
Preference number: 5 (lower is better)
Translates to: LAIPGQEAEFWRPEV*SQGVGWATLLLKGL
Trigger: TAGACCTTTCAGAAGGAGCGTGGCCCAGCCAACACCCTGACTTCAGACTTCTGGCCTCCAGAACTCAGCCTCCTGGCCGGGGATAGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460259.1
CDS CCA 90 bp ACCCTTGTTTCTCTTCCCTTTCTGCTCACCAGGCTTTCAGTGGGCTaGGGCTATTGGCTATCCCCGGCCAGGAGGCTGAGTTCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: TLVSLPFLLTRLSVG*GYWLSPARRLSSGG
Trigger: GCCTCCAGAACTCAGCCTCCTGGCCGGGGATAGCCAATAGCCCCAGCCCACTGAAAGCCTGGTGAGCAGAAAGGGAAGAGAAACAAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460259.1
CDS TCA 90 bp ACCGAGGGCCCTCAGTGTCGAGGTGACTCCCGGCCTGAGGAGGGCTaGGGCATCCTGAATTTTGAGAGTTCGAGGTTGAGGTCTAAGAAG +
Preference number: 5 (lower is better)
Translates to: TEGPQCRGDSRPEEG*GILNFESSRLRSKK
Trigger: CTTCTTAGACCTCAACCTCGAACTCTCAAAATTCAGGATGCCTCAGCCCTCCTCAGGCCGGGAGTCACCTCGACACTGAGGGCCCTCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340344.4
ENST00000354250.7
ENST00000460259.1
CDS-3UTR CAA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGCGCCCCGGCTCGTCCTaGCCGCAGCAAACACGGGGC +
Preference number: 5 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKRPGSS*PQQTRG
Trigger: GCCCCGTGTTTGCTGCGGCAAGGACGAGCCGGGGCG...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR CAA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACCCAAACAATGGCCCCTaGGGTGACCACTGTATTGCC +
Preference number: 5 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNPNNGP*GDHCIA
Trigger: GGCAATACAGTGGTCACCCAAGGGGCCATTGTTTGG...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS TCA 90 bp ACTTGGAATCGTGCGAAGTGCACTCCATCAGATCACCTTGGTGAGTaGACTGCCAAACCCGAAACACCGAAGGCCACCAGCCACAACCCG +
Preference number: 5 (lower is better)
Translates to: TWNRAKCTPSDHLGE*TAKPETPKATSHNP
Trigger: CGGGTTGTGGCTGGTGGCCTTCGGTGTTTCGGGTTTGGCAGTTCACTCACCAAGGTGATCTGATGGAGTGCACTTCGCACGATTCCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460259.1
CDS CCA 90 bp CTGCCTTCTGATGGCTTAGCAGGGGACCCTTTCTTCTTTGGCTGGTaGGGCTTCTCTGGATCAGTAATGTCCACATGCGGCTTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: LPSDGLAGDPFFFGW*GFSGSVMSTCGFCS
Trigger: GCTGCAGAAGCCGCATGTGGACATTACTGATCCAGAGAAGCCCCACCAGCCAAAGAAGAAAGGGTCCCCTGCTAAGCCATCAGAAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354250.7
ENST00000460259.1
ENST00000460740.1
CDS CCA 90 bp TCCCTGCCTTCTGATGGCTTAGCAGGGGACCCTTTCTTCTTTGGCTaGTGGGGCTTCTCTGGATCAGTAATGTCCACATGCGGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: SLPSDGLAGDPFFFG*WGFSGSVMSTCGFC
Trigger: GCAGAAGCCGCATGTGGACATTACTGATCCAGAGAAGCCCCACCAGCCAAAGAAGAAAGGGTCCCCTGCTAAGCCATCAGAAGGCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354250.7
ENST00000460259.1
ENST00000460740.1
CDS-3UTR CAA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACCTGGGGCTGGCTTTTTaGGTGGACTTTGCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNLGLAF*VDFASW
Trigger: CCAAGAAGCAAAGTCCACCAAAAAAGCCAGCCCCAG...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340344.4
CDS GCA 90 bp GGCTGCATCTTCCATGGCCTCGCCCTCGGCCTCAAGCTTCAGCGCTaGTGTCTTTTCATGGAAACCGTGGTTATTCTCAACAGGAACTGT +
Preference number: 5 (lower is better)
Translates to: GCIFHGLALGLKLQR*CLFMETVVILNRNC
Trigger: ACAGTTCCTGTTGAGAATAACCACGGTTTCCATGAAAAGACAGCAGCGCTGAAGCTTGAGGCCGAGGGCGAGGCCATGGAAGATGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354250.7
ENST00000460259.1
CDS CCA 90 bp GATTCCGCAGACAAAGAAACCGTAGAAGCAAGTCCTCGAAACACCTaGGCTTCCTGGAGCATAGTCTGTTGGAAGCTGGGCCCTCTGTGG +
Preference number: 5 (lower is better)
Translates to: DSADKETVEASPRNT*ASWSIVCWKLGPLW
Trigger: CCACAGAGGGCCCAGCTTCCAACAGACTATGCTCCAGGAAGCCCAGGTGTTTCGAGGACTTGCTTCTACGGTTTCTTTGTCTGCGGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460259.1
CDS-3UTR CAA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACTGGGTGACCACTGTATaGCCACCAGATGGACTATCA +
Preference number: 5 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNWVTTV*PPDGLS
Trigger: TGATAGTCCATCTGGTGGCAATACAGTGGTCACCCA...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR CAA 90 bp TCACGCCTGCAATCCCAGAACTTTCTGGGGCCGAGGCAGGCAGATCTCTTGAACTGGGCATTGTGGTTTTaGGTCTCGCATTTTCCCTGC +
Preference number: 5 (lower is better)
Translates to: SRLQSQNFLGPRQADLLNWALWF*VSHFPC
Trigger: GCAGGGAAAATGCGAGACCAAAAACCACAATGCCCA...GTTCAAGAGATCTGCCTGCCTCGGCCCCAGAAAGTTCTGGGATTGCAGGCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS TCA 90 bp GTCAGCCTCATCATCAGATTCAGAATCAGAGGAGCTGGAAGAGGATaGAGACGAAGGCGACGTCACTTTCCGACCCACCTGACGAGCTTC +
Preference number: 5 (lower is better)
Translates to: VSLIIRFRIRGAGRG*RRRRRHFPTHLTSF
Trigger: GAAGCTCGTCAGGTGGGTCGGAAAGTGACGTCGCCTTCGTCTTCATCCTCTTCCAGCTCCTCTGATTCTGAATCTGATGATGAGGCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354250.7
ENST00000460259.1
ENST00000460740.1
CDS CCA 90 bp GGCGCTGGGCTGCCCTTCGGTGGCGCAGACAACCCTGATTTTGTGTaGACAGGTAAGGGTCCTTTAACTTCAAATGGCTTTTGGCTTTCT +
Preference number: 5 (lower is better)
Translates to: GAGLPFGGADNPDFV*TGKGPLTSNGFWLS
Trigger: AGAAAGCCAAAAGCCATTTGAAGTTAAAGGACCCTTACCTGTCCACACAAAATCAGGGTTGTCTGCGCCACCGAAGGGCAGCCCAGCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354250.7
ENST00000460259.1
CDS TCA 90 bp CTGGAAGAGGATGAAGACGAAGGCGACGTCACTTTCCGACCCACCTaGCGAGCTTCTGAATCAGAGCCCTGTTTTCTGAATGGAGACAGA +
Preference number: 5 (lower is better)
Translates to: LEEDEDEGDVTFRPT*RASESEPCFLNGDR
Trigger: TCTGTCTCCATTCAGAAAACAGGGCTCTGATTCAGAAGCTCGTCAGGTGGGTCGGAAAGTGACGTCGCCTTCGTCTTCATCCTCTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354250.7
ENST00000460259.1
ENST00000460740.1
CDS TCA 90 bp AAGTACTTGGAATCGTGCGAAGTGCACTCCATCAGATCACCTTGGTaGGTGAACTGCCAAACCCGAAACACCGAAGGCCACCAGCCACAA +
Preference number: 5 (lower is better)
Translates to: KYLESCEVHSIRSPW*VNCQTRNTEGHQPQ
Trigger: TTGTGGCTGGTGGCCTTCGGTGTTTCGGGTTTGGCAGTTCACTCACCAAGGTGATCTGATGGAGTGCACTTCGCACGATTCCAAGTACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460259.1
CDS TCA 90 bp CCAGCAGGAGCAGGAGCCGTTCAGGAAACACATCCTACCAGTGAATaGACACCCTTGTTTCTCTTCCCTTTCTGCTCACCAGGCTTTCAG +
Preference number: 5 (lower is better)
Translates to: PAGAGAVQETHPTSE*TPLFLFPFCSPGFQ
Trigger: CTGAAAGCCTGGTGAGCAGAAAGGGAAGAGAAACAAGGGTGTTCATTCACTGGTAGGATGTGTTTCCTGAACGGCTCCTGCTCCTGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460259.1
CDS CCA 90 bp CCTCTGAAACGTCAGCCTCATCATCAGATTCAGAATCAGAGGAGCTaGAAGAGGATGAAGACGAAGGCGACGTCACTTTCCGACCCACCT +
Preference number: 5 (lower is better)
Translates to: PLKRQPHHQIQNQRS*KRMKTKATSLSDPP
Trigger: AGGTGGGTCGGAAAGTGACGTCGCCTTCGTCTTCATCCTCTTCCAGCTCCTCTGATTCTGAATCTGATGATGAGGCTGACGTTTCAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354250.7
ENST00000460259.1
ENST00000460740.1
CDS TCA 90 bp TTGTCCAGCAGGAGCAGGAGCCGTTCAGGAAACACATCCTACCAGTaGATGAACACCCTTGTTTCTCTTCCCTTTCTGCTCACCAGGCTT +
Preference number: 5 (lower is better)
Translates to: LSSRSRSRSGNTSYQ*MNTLVSLPFLLTRL
Trigger: AAGCCTGGTGAGCAGAAAGGGAAGAGAAACAAGGGTGTTCATTCACTGGTAGGATGTGTTTCCTGAACGGCTCCTGCTCCTGCTGGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460259.1
CDS CCA 90 bp ATGGCCTCGCCCTCGGCCTCAAGCTTCAGCGCTGCTGTCTTTTCATaGAAACCGTGGTTATTCTCAACAGGAACTGTCTCCAAATTGCTT +
Preference number: 5 (lower is better)
Translates to: MASPSASSFSAAVFS*KPWLFSTGTVSKLL
Trigger: AAGCAATTTGGAGACAGTTCCTGTTGAGAATAACCACGGTTTCCATGAAAAGACAGCAGCGCTGAAGCTTGAGGCCGAGGGCGAGGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354250.7
ENST00000460259.1
CDS-3UTR CAA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGTGGGTGGCTAGGAGCTaGCCCCTCTCCTTTGGTTCC +
Preference number: 5 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKWVARS*PLSFGS
Trigger: GGAACCAAAGGAGAGGGGCAAGCTCCTAGCCACCCA...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS CCA 90 bp GAAACCGTGGTTATTCTCAACAGGAACTGTCTCCAAATTGCTTGGTaGTATCTGATCTTCCACGATTGCCTGTCCACCCTTCAGGTGGCC +
Preference number: 5 (lower is better)
Translates to: ETVVILNRNCLQIAW*YLIFHDCLSTLQVA
Trigger: GGCCACCTGAAGGGTGGACAGGCAATCGTGGAAGATCAGATACCACCAAGCAATTTGGAGACAGTTCCTGTTGAGAATAACCACGGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354250.7
ENST00000460259.1
CDS-3UTR CAA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGGGGATGGGAGGTTACTaGGCCAACCCAGAAACCCTA +
Preference number: 5 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKGMGGY*ANPETL
Trigger: TAGGGTTTCTGGGTTGGCCAAGTAACCTCCCATCCC...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS CCA 90 bp ATGGAAACCGTGGTTATTCTCAACAGGAACTGTCTCCAAATTGCTTaGTGGTATCTGATCTTCCACGATTGCCTGTCCACCCTTCAGGTG +
Preference number: 5 (lower is better)
Translates to: METVVILNRNCLQIA*WYLIFHDCLSTLQV
Trigger: CACCTGAAGGGTGGACAGGCAATCGTGGAAGATCAGATACCACCAAGCAATTTGGAGACAGTTCCTGTTGAGAATAACCACGGTTTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354250.7
ENST00000460259.1
CDS-3UTR CAA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTCCAAACAATGGCCCCTaGGGTGACCACTGTATTGCC +
Preference number: 5 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPPNNGP*GDHCIA
Trigger: GGCAATACAGTGGTCACCCAAGGGGCCATTGTTTGG...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS TCA 90 bp TGGTTATTCTCAACAGGAACTGTCTCCAAATTGCTTGGTGGTATCTaGTCTTCCACGATTGCCTGTCCACCCTTCAGGTGGCCTTCTATT +
Preference number: 5 (lower is better)
Translates to: WLFSTGTVSKLLGGI*SSTIACPPFRWPSI
Trigger: AATAGAAGGCCACCTGAAGGGTGGACAGGCAATCGTGGAAGATCAGATACCACCAAGCAATTTGGAGACAGTTCCTGTTGAGAATAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354250.7
ENST00000460259.1
CDS-3UTR CAA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGAAGAATCTGGCTGAGTaGCTAAGTCTCCCGTGTGGT +
Preference number: 5 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKKNLAE*LSLPCG
Trigger: ACCACACGGGAGACTTAGCAACTCAGCCAGATTCTT...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR CAA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGAATGCAGAGCTGTGCTaGGTGCTGGCTATTCGGTTT +
Preference number: 5 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKNAELC*VLAIRF
Trigger: AAACCGAATAGCCAGCACCAAGCACAGCTCTGCATT...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR CAA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGTGGGTGACCACTGTATaGCCACCAGATGGACTATCA +
Preference number: 5 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKWVTTV*PPDGLS
Trigger: TGATAGTCCATCTGGTGGCAATACAGTGGTCACCCA...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR CAA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTTCTGATCTTCCACGATaGCCTGTCCACCCTTCAGGT +
Preference number: 5 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPSDLPR*PVHPSG
Trigger: ACCTGAAGGGTGGACAGGCAATCGTGGAAGATCAGA...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS GCA 90 bp TTTCATGGAAACCGTGGTTATTCTCAACAGGAACTGTCTCCAAATTaGTTGGTGGTATCTGATCTTCCACGATTGCCTGTCCACCCTTCA +
Preference number: 5 (lower is better)
Translates to: FHGNRGYSQQELSPN*LVVSDLPRLPVHPS
Trigger: TGAAGGGTGGACAGGCAATCGTGGAAGATCAGATACCACCAAGCAATTTGGAGACAGTTCCTGTTGAGAATAACCACGGTTTCCATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354250.7
ENST00000460259.1
CDS-3UTR CAA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTAATGCAGAGCTGTGCTaGGTGCTGGCTATTCGGTTT +
Preference number: 5 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPNAELC*VLAIRF
Trigger: AAACCGAATAGCCAGCACCAAGCACAGCTCTGCATT...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR CAA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGCTTGAGATCTGGGCATaGTGGTTTTTGGTCTCGCAT +
Preference number: 5 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKLEIWA*WFLVSH
Trigger: ATGCGAGACCAAAAACCACAATGCCCAGATCTCAAG...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR CAA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTCAGACAACCCTGATTTaGTGTGGACAGGTAAGGGTC +
Preference number: 5 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPQTTLI*CGQVRV
Trigger: GACCCTTACCTGTCCACACAAAATCAGGGTTGTCTG...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR CAA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGTTTGAGAGTTCGAGGTaGAGGTCTAAGAAGGTGTAC +
Preference number: 5 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKFESSR*RSKKVY
Trigger: GTACACCTTCTTAGACCTCAACCTCGAACTCTCAAA...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR CAA 90 bp TGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTAAGCTGTCTCCAAATTGCTaGGTGGTATCTGATCTTCCA +
Preference number: 5 (lower is better)
Translates to: CRYIKMVTPTTTTGESCKLSPNC*VVSDLP
Trigger: TGGAAGATCAGATACCACCAAGCAATTTGGAGACAG...CTTACAGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR CAA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTTTTGAGAGTTCGAGGTaGAGGTCTAAGAAGGTGTAC +
Preference number: 5 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPFESSR*RSKKVY
Trigger: GTACACCTTCTTAGACCTCAACCTCGAACTCTCAAA...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR CAA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTCAGTTTAATGCGAAATaGACTAGGCTGAGCACAGTA +
Preference number: 5 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPQFNAK*TRLSTV
Trigger: TACTGTGCTCAGCCTAGTCAATTTCGCATTAAACTG...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS-3UTR CAA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTGTTCCACTACATTTTTaGGTGGACTTTGCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPVPLHF*VDFASW
Trigger: CCAAGAAGCAAAGTCCACCAAAAAATGTAGTGGAAC...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR CAA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTAAACTCTTCATCTACTaGAGATCTGGGCATTGTGGT +
Preference number: 5 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPKLFIY*RSGHCG
Trigger: ACCACAATGCCCAGATCTCAAGTAGATGAAGAGTTT...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354250.7
CDS-3UTR CAA 90 bp AAAGTTGTAGGTACATTAAAATGGTTACACCTACCACCACCACTGGGGAATCCTCACGCACCACCACAGTaGGCTAATTTTTGTATTTTT +
Preference number: 5 (lower is better)
Translates to: KVVGTLKWLHLPPPLGNPHAPPQ*ANFCIF
Trigger: AAAAATACAAAAATTAGCCAACTGTGGTGGTGCGTG...AGGATTCCCCAGTGGTGGTGGTAGGTGTAACCATTTTAATGTACCTACAACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS CCA 72 bp TGGGGCTGGCTCCTGTGTGCCGCCTCGGTCGTCCCCTaGCGCGGCTGCATCTTCCATGGCCTCGCCCTCGGC +
Preference number: 6 (lower is better)
Translates to: WGWLLCAASVVP*RGCIFHGLALG
Trigger: GCCGAGGGCGAGGCCATGGAAGATGCAGCCGCGCCAGGGGACGACCGAGGCGGCACACAGGAGCCAGCCCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354250.7
ENST00000460259.1
CDS CCA 72 bp CGCCTCGGTCGTCCCCTGGCGCGGCTGCATCTTCCATaGCCTCGCCCTCGGCCTCAAGCTTCAGCGCTGCTG +
Preference number: 6 (lower is better)
Translates to: RLGRPLARLHLP*PRPRPQASALL
Trigger: CAGCAGCGCTGAAGCTTGAGGCCGAGGGCGAGGCCATGGAAGATGCAGCCGCGCCAGGGGACGACCGAGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354250.7
ENST00000460259.1
CDS TCA 72 bp GTCCTTGCCGCAGCAAACACGGGGCAGCCATGGCGGTaGCAGCGGGCGCACCAAGCAGGGCCACAGCAGCTG +
Preference number: 6 (lower is better)
Translates to: VLAAANTGQPWR*QRAHQAGPQQL
Trigger: CAGCTGCTGTGGCCCTGCTTGGTGCGCCCGCTGTCACCGCCATGGCTGCCCCGTGTTTGCTGCGGCAAGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340344.4
CDS GCA 72 bp CTCCTGTGTGCCGCCTCGGTCGTCCCCTGGCGCGGCTaGATCTTCCATGGCCTCGCCCTCGGCCTCAAGCTT +
Preference number: 6 (lower is better)
Translates to: LLCAASVVPWRG*IFHGLALGLKL
Trigger: AAGCTTGAGGCCGAGGGCGAGGCCATGGAAGATGCAGCCGCGCCAGGGGACGACCGAGGCGGCACACAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354250.7
ENST00000460259.1
CDS GCA 72 bp TCCTGGAGCATAGTCTTCAGCGCCCCGGCTCGTCCTTaGCGCAGCAAACACGGGGCAGCCATGGCGGTGACA +
Preference number: 6 (lower is better)
Translates to: SWSIVFSAPARP*RSKHGAAMAVT
Trigger: TGTCACCGCCATGGCTGCCCCGTGTTTGCTGCGGCAAGGACGAGCCGGGGCGCTGAAGACTATGCTCCAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS CAA 72 bp TTCCTGGAGCATAGTCTTCAGCGCCCCGGCTCGTCCTaGCCGCAGCAAACACGGGGCAGCCATGGCGGTGAC +
Preference number: 6 (lower is better)
Translates to: FLEHSLQRPGSS*PQQTRGSHGGD
Trigger: GTCACCGCCATGGCTGCCCCGTGTTTGCTGCGGCAAGGACGAGCCGGGGCGCTGAAGACTATGCTCCAGGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS GCA 72 bp TGGTTCCACTACATCTTCAGCGCCCCGGCTCGTCCTTaGCGCAGCAAACACGGGGCAGCCATGGCGGTGACA +
Preference number: 6 (lower is better)
Translates to: WFHYIFSAPARP*RSKHGAAMAVT
Trigger: TGTCACCGCCATGGCTGCCCCGTGTTTGCTGCGGCAAGGACGAGCCGGGGCGCTGAAGATGTAGTGGAACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460740.1
CDS CAA 72 bp TTGGTTCCACTACATCTTCAGCGCCCCGGCTCGTCCTaGCCGCAGCAAACACGGGGCAGCCATGGCGGTGAC +
Preference number: 6 (lower is better)
Translates to: LVPLHLQRPGSS*PQQTRGSHGGD
Trigger: GTCACCGCCATGGCTGCCCCGTGTTTGCTGCGGCAAGGACGAGCCGGGGCGCTGAAGATGTAGTGGAACCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460740.1
CDS CAA 72 bp CTGCTGTCTGGGTGGCTAGGAGCTTGCCCCTCTCCTTaGGTTCCACTACATCTTCAGCGCCCCGGCTCGTCC +
Preference number: 6 (lower is better)
Translates to: LLSGWLGACPSP*VPLHLQRPGSS
Trigger: GGACGAGCCGGGGCGCTGAAGATGTAGTGGAACCAAAGGAGAGGGGCAAGCTCCTAGCCACCCAGACAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460740.1
CDS GCA 72 bp CTCTGGCCTCTTCTGCCAACACAGCAGGCGCTGGGCTaGCCTTCGGTGGCGCAGACAACCCTGATTTTGTGT +
Preference number: 6 (lower is better)
Translates to: LWPLLPTQQALG*PSVAQTTLILC
Trigger: ACACAAAATCAGGGTTGTCTGCGCCACCGAAGGGCAGCCCAGCGCCTGCTGTGTTGGCAGAAGAGGCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354250.7
ENST00000460259.1
CDS GCA 72 bp ATTGCCTGTCCACCCTTCAGGTGGCCTTCTATTCCCTaGGTCCCTGAGGTTTCCTTTCTGGGCAGGGGAGGG +
Preference number: 6 (lower is better)
Translates to: IACPPFRWPSIP*VPEVSFLGRGG
Trigger: CCCTCCCCTGCCCAGAAAGGAAACCTCAGGGACGCAGGGAATAGAAGGCCACCTGAAGGGTGGACAGGCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354250.7
ENST00000460259.1
CDS CCA 72 bp TCTCTTCCCTTTCTGCTCACCAGGCTTTCAGTGGGCTaGGGCTATTGGCTATCCCCGGCCAGGAGGCTGAGT +
Preference number: 6 (lower is better)
Translates to: SLPFLLTRLSVG*GYWLSPARRLS
Trigger: ACTCAGCCTCCTGGCCGGGGATAGCCAATAGCCCCAGCCCACTGAAAGCCTGGTGAGCAGAAAGGGAAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460259.1
CDS CCA 72 bp TCCTGGAGCATAGTCTGTTGGAAGCTGGGCCCTCTGTaGGCTTGTCCAGCAGGAGCAGGAGCCGTTCAGGAA +
Preference number: 6 (lower is better)
Translates to: SWSIVCWKLGPL*ACPAGAGAVQE
Trigger: TTCCTGAACGGCTCCTGCTCCTGCTGGACAAGCCCACAGAGGGCCCAGCTTCCAACAGACTATGCTCCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460259.1
CDS CAA 90 bp GGCTTCCTGGAGCATAGTCTGTTGGAAGCTGGGCCCTCTGTGGGCTaGTCCAGCAGGAGCAGGAGCCGTTCAGGAAACACATCCTACCAG +
Preference number: 6 (lower is better)
Translates to: GFLEHSLLEAGPSVG*SSRSRSRSGNTSYQ
Trigger: CTGGTAGGATGTGTTTCCTGAACGGCTCCTGCTCCTGCTGGACAAGCCCACAGAGGGCCCAGCTTCCAACAGACTATGCTCCAGGAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460259.1
CDS CAA 90 bp AGAAGCAAGTCCTCGAAACACCTGGGCTTCCTGGAGCATAGTCTGTaGGAAGCTGGGCCCTCTGTGGGCTTGTCCAGCAGGAGCAGGAGC +
Preference number: 6 (lower is better)
Translates to: RSKSSKHLGFLEHSL*EAGPSVGLSSRSRS
Trigger: GCTCCTGCTCCTGCTGGACAAGCCCACAGAGGGCCCAGCTTCCAACAGACTATGCTCCAGGAAGCCCAGGTGTTTCGAGGACTTGCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460259.1
CDS TCA 72 bp CCTCAGTGTCGAGGTGACTCCCGGCCTGAGGAGGGCTaGGGCATCCTGAATTTTGAGAGTTCGAGGTTGAGG +
Preference number: 6 (lower is better)
Translates to: PQCRGDSRPEEG*GILNFESSRLR
Trigger: CCTCAACCTCGAACTCTCAAAATTCAGGATGCCTCAGCCCTCCTCAGGCCGGGAGTCACCTCGACACTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340344.4
ENST00000354250.7
ENST00000460259.1
CDS CAA 72 bp GAGCATAGTCTGTTGGAAGCTGGGCCCTCTGTGGGCTaGTCCAGCAGGAGCAGGAGCCGTTCAGGAAACACA +
Preference number: 6 (lower is better)
Translates to: EHSLLEAGPSVG*SSRSRSRSGNT
Trigger: TGTGTTTCCTGAACGGCTCCTGCTCCTGCTGGACAAGCCCACAGAGGGCCCAGCTTCCAACAGACTATGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460259.1
CDS CCA 72 bp ACCGTAGAAGCAAGTCCTCGAAACACCTGGGCTTCCTaGAGCATAGTCTGTTGGAAGCTGGGCCCTCTGTGG +
Preference number: 6 (lower is better)
Translates to: TVEASPRNTWAS*SIVCWKLGPLW
Trigger: CCACAGAGGGCCCAGCTTCCAACAGACTATGCTCCAGGAAGCCCAGGTGTTTCGAGGACTTGCTTCTACGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460259.1
CDS CCA 72 bp GACAAAGAAACCGTAGAAGCAAGTCCTCGAAACACCTaGGCTTCCTGGAGCATAGTCTTCAGCGCCCCGGCT +
Preference number: 6 (lower is better)
Translates to: DKETVEASPRNT*ASWSIVFSAPA
Trigger: AGCCGGGGCGCTGAAGACTATGCTCCAGGAAGCCCAGGTGTTTCGAGGACTTGCTTCTACGGTTTCTTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340344.4
ENST00000354250.7
CDS CAA 90 bp AGGCAAGTACTTGGAATCGTGCGAAGTGCACTCCATCAGATCACCTaGGTGAGTGAACTGCCAAACCCGAAACACCGAAGGCCACCAGCC +
Preference number: 6 (lower is better)
Translates to: RQVLGIVRSALHQIT*VSELPNPKHRRPPA
Trigger: GGCTGGTGGCCTTCGGTGTTTCGGGTTTGGCAGTTCACTCACCAAGGTGATCTGATGGAGTGCACTTCGCACGATTCCAAGTACTTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460259.1
CDS GCA 72 bp TTCCATGGCCTCGCCCTCGGCCTCAAGCTTCAGCGCTaGTGTCTTTTCATGGAAACCGTGGTTATTCTCAAC +
Preference number: 6 (lower is better)
Translates to: FHGLALGLKLQR*CLFMETVVILN
Trigger: GTTGAGAATAACCACGGTTTCCATGAAAAGACAGCAGCGCTGAAGCTTGAGGCCGAGGGCGAGGCCATGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354250.7
ENST00000460259.1
CDS CAA 90 bp CAGGAACTGTCTCCAAATTGCTTGGTGGTATCTGATCTTCCACGATaGCCTGTCCACCCTTCAGGTGGCCTTCTATTCCCTGCGTCCCTG +
Preference number: 6 (lower is better)
Translates to: QELSPNCLVVSDLPR*PVHPSGGLLFPASL
Trigger: CAGGGACGCAGGGAATAGAAGGCCACCTGAAGGGTGGACAGGCAATCGTGGAAGATCAGATACCACCAAGCAATTTGGAGACAGTTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354250.7
ENST00000460259.1
CDS TCA 72 bp AGGCGACGTCACTTTCCGACCCACCTGACGAGCTTCTaGATCAGAGCCCTGTTTTCTGAATGGAGACAGAAC +
Preference number: 6 (lower is better)
Translates to: RRRHFPTHLTSF*IRALFSEWRQN
Trigger: GTTCTGTCTCCATTCAGAAAACAGGGCTCTGATTCAGAAGCTCGTCAGGTGGGTCGGAAAGTGACGTCGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354250.7
ENST00000460259.1
ENST00000460740.1
CDS CCA 72 bp CCCTCGGCCTCAAGCTTCAGCGCTGCTGTCTTTTCATaGAAACCGTGGTTATTCTCAACAGGAACTGTCTCC +
Preference number: 6 (lower is better)
Translates to: PSASSFSAAVFS*KPWLFSTGTVS
Trigger: GGAGACAGTTCCTGTTGAGAATAACCACGGTTTCCATGAAAAGACAGCAGCGCTGAAGCTTGAGGCCGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354250.7
ENST00000460259.1
CDS CCA 72 bp GACAAAGAAACCGTAGAAGCAAGTCCTCGAAACACCTaGGCTTCCTGGAGCATAGTCTGTTGGAAGCTGGGC +
Preference number: 6 (lower is better)
Translates to: DKETVEASPRNT*ASWSIVCWKLG
Trigger: GCCCAGCTTCCAACAGACTATGCTCCAGGAAGCCCAGGTGTTTCGAGGACTTGCTTCTACGGTTTCTTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460259.1
CDS CAA 72 bp CTTGGAATCGTGCGAAGTGCACTCCATCAGATCACCTaGGTGAGTGAACTGCCAAACCCGAAACACCGAAGG +
Preference number: 6 (lower is better)
Translates to: LGIVRSALHQIT*VSELPNPKHRR
Trigger: CCTTCGGTGTTTCGGGTTTGGCAGTTCACTCACCAAGGTGATCTGATGGAGTGCACTTCGCACGATTCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460259.1
CDS TCA 72 bp GATGAAGACGAAGGCGACGTCACTTTCCGACCCACCTaGCGAGCTTCTGAATCAGAGCCCTGTTTTCTGAAT +
Preference number: 6 (lower is better)
Translates to: DEDEGDVTFRPT*RASESEPCFLN
Trigger: ATTCAGAAAACAGGGCTCTGATTCAGAAGCTCGTCAGGTGGGTCGGAAAGTGACGTCGCCTTCGTCTTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354250.7
ENST00000460259.1
ENST00000460740.1
CDS TCA 72 bp ATCATCAGATTCAGAATCAGAGGAGCTGGAAGAGGATaGAGACGAAGGCGACGTCACTTTCCGACCCACCTG +
Preference number: 6 (lower is better)
Translates to: IIRFRIRGAGRG*RRRRRHFPTHL
Trigger: CAGGTGGGTCGGAAAGTGACGTCGCCTTCGTCTTCATCCTCTTCCAGCTCCTCTGATTCTGAATCTGATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354250.7
ENST00000460259.1
ENST00000460740.1
CDS TCA 72 bp CCCTCTGCCTTTGCTCACCACTCGAGGAGTGACCTCTaGAACGTCAGCCTCATCATCAGATTCAGAATCAGA +
Preference number: 6 (lower is better)
Translates to: PSAFAHHSRSDL*NVSLIIRFRIR
Trigger: TCTGATTCTGAATCTGATGATGAGGCTGACGTTTCAGAGGTCACTCCTCGAGTGGTGAGCAAAGGCAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354250.7
ENST00000460259.1
ENST00000460740.1
CDS GCA 72 bp CTCCAAATTGCTTGGTGGTATCTGATCTTCCACGATTaGCTGTCCACCCTTCAGGTGGCCTTCTATTCCCTG +
Preference number: 6 (lower is better)
Translates to: LQIAWWYLIFHD*LSTLQVAFYSL
Trigger: CAGGGAATAGAAGGCCACCTGAAGGGTGGACAGGCAATCGTGGAAGATCAGATACCACCAAGCAATTTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354250.7
ENST00000460259.1
CDS CCA 72 bp CGTCAGCCTCATCATCAGATTCAGAATCAGAGGAGCTaGAAGAGGATGAAGACGAAGGCGACGTCACTTTCC +
Preference number: 6 (lower is better)
Translates to: RQPHHQIQNQRS*KRMKTKATSLS
Trigger: GGAAAGTGACGTCGCCTTCGTCTTCATCCTCTTCCAGCTCCTCTGATTCTGAATCTGATGATGAGGCTGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354250.7
ENST00000460259.1
ENST00000460740.1
CDS TCA 72 bp TCAACAGGAACTGTCTCCAAATTGCTTGGTGGTATCTaGTCTTCCACGATTGCCTGTCCACCCTTCAGGTGG +
Preference number: 6 (lower is better)
Translates to: STGTVSKLLGGI*SSTIACPPFRW
Trigger: CCACCTGAAGGGTGGACAGGCAATCGTGGAAGATCAGATACCACCAAGCAATTTGGAGACAGTTCCTGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354250.7
ENST00000460259.1
CDS CCA 72 bp GGTGAAGATAAGTTTTTAGACAATTCAGCTGCTGTCTaGGTGGCTAGGAGCTTGCCCCTCTCCTTTGGTTCC +
Preference number: 6 (lower is better)
Translates to: GEDKFLDNSAAV*VARSLPLSFGS
Trigger: GGAACCAAAGGAGAGGGGCAAGCTCCTAGCCACCCAGACAGCAGCTGAATTGTCTAAAAACTTATCTTCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354250.7
ENST00000460259.1
ENST00000460740.1
CDS CAA 72 bp TCTCCAAATTGCTTGGTGGTATCTGATCTTCCACGATaGCCTGTCCACCCTTCAGGTGGCCTTCTATTCCCT +
Preference number: 6 (lower is better)
Translates to: SPNCLVVSDLPR*PVHPSGGLLFP
Trigger: AGGGAATAGAAGGCCACCTGAAGGGTGGACAGGCAATCGTGGAAGATCAGATACCACCAAGCAATTTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354250.7
ENST00000460259.1
CDS CAA 90 bp CATGGAAACCGTGGTTATTCTCAACAGGAACTGTCTCCAAATTGCTaGGTGGTATCTGATCTTCCACGATTGCCTGTCCACCCTTCAGGT +
Preference number: 6 (lower is better)
Translates to: HGNRGYSQQELSPNC*VVSDLPRLPVHPSG
Trigger: ACCTGAAGGGTGGACAGGCAATCGTGGAAGATCAGATACCACCAAGCAATTTGGAGACAGTTCCTGTTGAGAATAACCACGGTTTCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354250.7
ENST00000460259.1
CDS CCA 72 bp GTGGTTATTCTCAACAGGAACTGTCTCCAAATTGCTTaGTGGTATCTGATCTTCCACGATTGCCTGTCCACC +
Preference number: 6 (lower is better)
Translates to: VVILNRNCLQIA*WYLIFHDCLST
Trigger: GGTGGACAGGCAATCGTGGAAGATCAGATACCACCAAGCAATTTGGAGACAGTTCCTGTTGAGAATAACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354250.7
ENST00000460259.1
CDS CAA 72 bp CGTGGTTATTCTCAACAGGAACTGTCTCCAAATTGCTaGGTGGTATCTGATCTTCCACGATTGCCTGTCCAC +
Preference number: 6 (lower is better)
Translates to: RGYSQQELSPNC*VVSDLPRLPVH
Trigger: GTGGACAGGCAATCGTGGAAGATCAGATACCACCAAGCAATTTGGAGACAGTTCCTGTTGAGAATAACCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354250.7
ENST00000460259.1
CDS GCA 72 bp GGCTTCTCTGGATCAGTAATGTCCACATGCGGCTTCTaGAGCAAGGTTTTCTCTTTTGCTGATACTGTAACT +
Preference number: 6 (lower is better)
Translates to: GFSGSVMSTCGF*SKVFSFADTVT
Trigger: AGTTACAGTATCAGCAAAAGAGAAAACCTTGCTGCAGAAGCCGCATGTGGACATTACTGATCCAGAGAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354250.7
ENST00000460259.1
ENST00000460740.1
CDS GCA 72 bp AACCGTGGTTATTCTCAACAGGAACTGTCTCCAAATTaGTTGGTGGTATCTGATCTTCCACGATTGCCTGTC +
Preference number: 6 (lower is better)
Translates to: NRGYSQQELSPN*LVVSDLPRLPV
Trigger: GACAGGCAATCGTGGAAGATCAGATACCACCAAGCAATTTGGAGACAGTTCCTGTTGAGAATAACCACGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354250.7
ENST00000460259.1
CDS CCA 72 bp GTTATTCTCAACAGGAACTGTCTCCAAATTGCTTGGTaGTATCTGATCTTCCACGATTGCCTGTCCACCCTT +
Preference number: 6 (lower is better)
Translates to: VILNRNCLQIAW*YLIFHDCLSTL
Trigger: AAGGGTGGACAGGCAATCGTGGAAGATCAGATACCACCAAGCAATTTGGAGACAGTTCCTGTTGAGAATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354250.7
ENST00000460259.1
CDS CAA 90 bp GGTCTAGGGGAGAATTCTTCCTCATCTTTCTCTTGGCTTCTGGTGTaGCCAGCAATCCTTGAATTATGGCCACATAACTTCAATCTCTGT +
Preference number: 6 (lower is better)
Translates to: GLGENSSSSFSWLLV*PAILELWPHNFNLC
Trigger: ACAGAGATTGAAGTTATGTGGCCATAATTCAAGGATTGCTGGCAACACCAGAAGCCAAGAGAAAGATGAGGAAGAATTCTCCCCTAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460259.1
CDS CAA 72 bp GAGAATTCTTCCTCATCTTTCTCTTGGCTTCTGGTGTaGCCAGCAATCCTTGAATTATGGCCACATAACTTC +
Preference number: 6 (lower is better)
Translates to: ENSSSSFSWLLV*PAILELWPHNF
Trigger: GAAGTTATGTGGCCATAATTCAAGGATTGCTGGCAACACCAGAAGCCAAGAGAAAGATGAGGAAGAATTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460259.1