Pregenerated sensors for NDUFV2 (Homo sapiens)
Ensembl gene IDs: ENSG00000178127Ensembl transcript IDs: ENST00000400033.1, ENST00000474350.5, ENST00000483511.1, ENST00000497577.2, ENST00000577703.1
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTCTCCCTAAGCCTTCACGAAGCAAGCCAGAGCTCTCCAGTATGCTaGAACCTAAAAGCATCGAGGTCACTAGGCTTGAAACGAGAGGTG | + |
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Preference number: 1 (lower is better) Translates to: FSLSLHEASQSSPVC*NLKASRSLGLKREV Trigger: CACCTCTCGTTTCAAGCCTAGTGACCTCGATGCTTTTAGGTTGCAGCATACTGGAGAGCTCTGGCTTGCTTCGTGAAGGCTTAGGGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000497577.2 ENST00000577703.1 |
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| 3UTR GCA 90 bp | AAGTTCTCCCTAAGCCTTCACGAAGCAAGCCAGAGCTCTCCAGTATaGTGCAACCTAAAAGCATCGAGGTCACTAGGCTTGAAACGAGAG | + |
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Preference number: 1 (lower is better) Translates to: KFSLSLHEASQSSPV*CNLKASRSLGLKRE Trigger: CTCTCGTTTCAAGCCTAGTGACCTCGATGCTTTTAGGTTGCAGCATACTGGAGAGCTCTGGCTTGCTTCGTGAAGGCTTAGGGAGAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000497577.2 ENST00000577703.1 |
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| 3UTR CAA 90 bp | AGCTCTCCAGTATGCTGCAACCTAAAAGCATCGAGGTCACTAGGCTaGAAACGAGAGGTGCCTCCTTCGGAGCGACGGTCTTCGAAACTG | + |
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Preference number: 2 (lower is better) Translates to: SSPVCCNLKASRSLG*KREVPPSERRSSKL Trigger: CAGTTTCGAAGACCGTCGCTCCGAAGGAGGCACCTCTCGTTTCAAGCCTAGTGACCTCGATGCTTTTAGGTTGCAGCATACTGGAGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000497577.2 ENST00000577703.1 |
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| 3UTR-3UTR GCA 90 bp | AAGCCTTCACGAAGCAAGCCAGAGCTCTCCAGTATGCTGCAACCTAAAAGCATCTTGGGTGCTGTTATTTaGGGCGCCGTTCTTTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: KPSRSKPELSSMLQPKSILGAVI*GAVLSE Trigger: CTCTGAAAGAACGGCGCCGCAAATAACAGCACCCAA...GATGCTTTTAGGTTGCAGCATACTGGAGAGCTCTGGCTTGCTTCGTGAAGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000497577.2 ENST00000577703.1 |
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| 3UTR-3UTR GCA 90 bp | CACGAAGCAAGCCAGAGCTCTCCAGTATGCTGCAACCTAAAAGCATCGAGGTCAGGTTCTTTAATTGGGTaGTGTTATTTGCGGCGCCGT | + |
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Preference number: 2 (lower is better) Translates to: HEASQSSPVCCNLKASRSGSLIG*CYLRRR Trigger: ACGGCGCCGCAAATAACAGCACCCAATTAAAGAACC...TGACCTCGATGCTTTTAGGTTGCAGCATACTGGAGAGCTCTGGCTTGCTTCGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000497577.2 ENST00000577703.1 |
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| 3UTR-3UTR GCA 90 bp | TCCAGTATGCTGCAACCTAAAAGCATCGAGGTCACTAGGCTTGAAACGAGAGGTCAGAGCTCTCCAGTATaGTGCAACCTAAAAGCATCG | + |
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Preference number: 2 (lower is better) Translates to: SSMLQPKSIEVTRLETRGQSSPV*CNLKAS Trigger: CGATGCTTTTAGGTTGCAGCATACTGGAGAGCTCTG...ACCTCTCGTTTCAAGCCTAGTGACCTCGATGCTTTTAGGTTGCAGCATACTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000497577.2 ENST00000577703.1 |
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| 3UTR-3UTR TCA 90 bp | CAACCTAAAAGCATCGAGGTCACTAGGCTTGAAACGAGAGGTGCCTCCTTCGGACTTTCAGAGTTAGTTTaGTACCGTTTATTTAGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: QPKSIEVTRLETRGASFGLSELV*YRLFSQ Trigger: CTGGCTAAATAAACGGTATCAAACTAACTCTGAAAG...TCCGAAGGAGGCACCTCTCGTTTCAAGCCTAGTGACCTCGATGCTTTTAGGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000497577.2 ENST00000577703.1 |
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| 3UTR-3UTR GCA 90 bp | CAACCTAAAAGCATCGAGGTCACTAGGCTTGAAACGAGAGGTGCCTCCTTCGGATATGCAAAGCACAACTaGAGTAAATCAAACATTGGC | + |
|
Preference number: 2 (lower is better) Translates to: QPKSIEVTRLETRGASFGYAKHN*SKSNIG Trigger: GCCAATGTTTGATTTACTGCAGTTGTGCTTTGCATA...TCCGAAGGAGGCACCTCTCGTTTCAAGCCTAGTGACCTCGATGCTTTTAGGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000497577.2 ENST00000577703.1 |
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| 3UTR-3UTR GCA 90 bp | TCCAGTATGCTGCAACCTAAAAGCATCGAGGTCACTAGGCTTGAAACGAGAGGTTATGCAAAGCACAACTaGAGTAAATCAAACATTGGC | + |
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Preference number: 2 (lower is better) Translates to: SSMLQPKSIEVTRLETRGYAKHN*SKSNIG Trigger: GCCAATGTTTGATTTACTGCAGTTGTGCTTTGCATA...ACCTCTCGTTTCAAGCCTAGTGACCTCGATGCTTTTAGGTTGCAGCATACTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000497577.2 ENST00000577703.1 |
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| 3UTR-3UTR GCA 90 bp | TATTACTTGTGTAACAGGCCCTGTTGTTATAATCGACATTTCTGGAAATCTGCACAGAGCTCTCCAGTATaGTGCAACCTAAAAGCATCG | + |
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Preference number: 2 (lower is better) Translates to: YYLCNRPCCYNRHFWKSAQSSPV*CNLKAS Trigger: CGATGCTTTTAGGTTGCAGCATACTGGAGAGCTCTG...TGCAGATTTCCAGAAATGTCGATTATAACAACAGGGCCTGTTACACAAGTAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497577.2 |
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| 3UTR-3UTR CCA 90 bp | GCTTCTTTCCAGTATTACTTGTGTAACAGGCCCTGTTGTTATAATCGACATTTCCTGTGGTTCTTTAATTaGGTGCTGTTATTTGCGGCG | + |
|
Preference number: 2 (lower is better) Translates to: ASFQYYLCNRPCCYNRHFLWFFN*VLLFAA Trigger: CGCCGCAAATAACAGCACCCAATTAAAGAACCACAG...GAAATGTCGATTATAACAACAGGGCCTGTTACACAAGTAATACTGGAAAGAAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497577.2 |
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| 3UTR-3UTR CAA 90 bp | GAAGTTCTCCCTAAGCCTTCACGAAGCAAGCCAGAGCTCTCCAGTATGCTGCAATCGAGGTCACTAGGCTaGAAACGAGAGGTGCCTCCT | + |
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Preference number: 3 (lower is better) Translates to: EVLPKPSRSKPELSSMLQSRSLG*KREVPP Trigger: AGGAGGCACCTCTCGTTTCAAGCCTAGTGACCTCGA...TTGCAGCATACTGGAGAGCTCTGGCTTGCTTCGTGAAGGCTTAGGGAGAACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000497577.2 ENST00000577703.1 |
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| 3UTR GCA 72 bp | CTAAGCCTTCACGAAGCAAGCCAGAGCTCTCCAGTATaGTGCAACCTAAAAGCATCGAGGTCACTAGGCTTG | + |
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Preference number: 3 (lower is better) Translates to: LSLHEASQSSPV*CNLKASRSLGL Trigger: CAAGCCTAGTGACCTCGATGCTTTTAGGTTGCAGCATACTGGAGAGCTCTGGCTTGCTTCGTGAAGGCTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000497577.2 ENST00000577703.1 |
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| 3UTR-3UTR CAA 90 bp | AAGCCTTCACGAAGCAAGCCAGAGCTCTCCAGTATGCTGCAACCTAAAAGCATCGCAGTAAATCAAACATaGGCCACCCTTTTCCAGCCC | + |
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Preference number: 3 (lower is better) Translates to: KPSRSKPELSSMLQPKSIAVNQT*ATLFQP Trigger: GGGCTGGAAAAGGGTGGCCAATGTTTGATTTACTGC...GATGCTTTTAGGTTGCAGCATACTGGAGAGCTCTGGCTTGCTTCGTGAAGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000497577.2 ENST00000577703.1 |
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| 3UTR GCA 72 bp | AGCCTTCACGAAGCAAGCCAGAGCTCTCCAGTATGCTaGAACCTAAAAGCATCGAGGTCACTAGGCTTGAAA | + |
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Preference number: 3 (lower is better) Translates to: SLHEASQSSPVC*NLKASRSLGLK Trigger: TTTCAAGCCTAGTGACCTCGATGCTTTTAGGTTGCAGCATACTGGAGAGCTCTGGCTTGCTTCGTGAAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000497577.2 ENST00000577703.1 |
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| 3UTR TCA 72 bp | GCTGTTATTTGCGGCGCCGTTCTTTCAGAGTTAGTTTaGTACCGTTTATTTAGCCAGCATTTCCGATATGCA | + |
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Preference number: 3 (lower is better) Translates to: AVICGAVLSELV*YRLFSQHFRYA Trigger: TGCATATCGGAAATGCTGGCTAAATAAACGGTATCAAACTAACTCTGAAAGAACGGCGCCGCAAATAACAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000497577.2 ENST00000577703.1 |
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| 3UTR GCA 72 bp | TTATTTAGCCAGCATTTCCGATATGCAAAGCACAACTaGAGTAAATCAAACATTGGCCACCCTTTTCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LFSQHFRYAKHN*SKSNIGHPFPA Trigger: GGCTGGAAAAGGGTGGCCAATGTTTGATTTACTGCAGTTGTGCTTTGCATATCGGAAATGCTGGCTAAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000497577.2 ENST00000577703.1 |
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| CDS-3UTR CCA 90 bp | CAACCTAAAAGCATCGAGGTCACTAGGCTTGAAACGAGAGGTGCCTCCTTCGGACGGGGCTTCTCACGGTaGGGCTGCAGCGGCCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: QPKSIEVTRLETRGASFGRGFSR*GCSGLP Trigger: AGGGAGGCCGCTGCAGCCCCACCGTGAGAAGCCCCG...TCCGAAGGAGGCACCTCTCGTTTCAAGCCTAGTGACCTCGATGCTTTTAGGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000577703.1 |
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| CDS-3UTR CCA 90 bp | TCCAGCCCTAATGAAGTTCTCCCTAAGCCTTCACGAAGCAAGCCAGAGCTCTCCGTACACTTCCCAGTATaGCAACCCTCCCTCGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: SSPNEVLPKPSRSKPELSVHFPV*QPSLGA Trigger: AGCCCCGAGGGAGGGTTGCCATACTGGGAAGTGTAC...GGAGAGCTCTGGCTTGCTTCGTGAAGGCTTAGGGAGAACTTCATTAGGGCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000577703.1 |
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| 3UTR CAA 72 bp | GTATGCTGCAACCTAAAAGCATCGAGGTCACTAGGCTaGAAACGAGAGGTGCCTCCTTCGGAGCGACGGTCT | + |
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Preference number: 4 (lower is better) Translates to: VCCNLKASRSLG*KREVPPSERRS Trigger: AGACCGTCGCTCCGAAGGAGGCACCTCTCGTTTCAAGCCTAGTGACCTCGATGCTTTTAGGTTGCAGCATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000497577.2 ENST00000577703.1 |
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| CDS-3UTR GCA 90 bp | AAAGCATCGAGGTCACTAGGCTTGAAACGAGAGGTGCCTCCTTCGGAGCGACGGAGCAGGCCTAGATTCTaGGCTACAGCAAAACAGCAA | + |
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Preference number: 4 (lower is better) Translates to: KASRSLGLKREVPPSERRSRPRF*ATAKQQ Trigger: TTGCTGTTTTGCTGTAGCGCAGAATCTAGGCCTGCT...CCGTCGCTCCGAAGGAGGCACCTCTCGTTTCAAGCCTAGTGACCTCGATGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000577703.1 |
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| CDS-3UTR CCA 90 bp | CTGGCCAGAGCAGGCCTAGATTCTGCGCTACAGCAAAACAGCAAAAACAAACAACCGCGGAGAAGAACATaGCGGGCCACACTGTTCACC | + |
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Preference number: 4 (lower is better) Translates to: LARAGLDSALQQNSKNKQPRRRT*RATLFT Trigger: GGTGAACAGTGTGGCCCGCCATGTTCTTCTCCGCGG...TTGTTTGTTTTTGCTGTTTTGCTGTAGCGCAGAATCTAGGCCTGCTCTGGCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000577703.1 |
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| CDS-3UTR GCA 90 bp | AAAAGCATCGAGGTCACTAGGCTTGAAACGAGAGGTGCCTCCTTCGGAGCGACGGGTTCTTTAATTGGGTaGTGTTATTTGCGGCGCCGT | + |
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Preference number: 4 (lower is better) Translates to: KSIEVTRLETRGASFGATGSLIG*CYLRRR Trigger: ACGGCGCCGCAAATAACAGCACCCAATTAAAGAACC...CGTCGCTCCGAAGGAGGCACCTCTCGTTTCAAGCCTAGTGACCTCGATGCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000497577.2 ENST00000577703.1 |
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| CDS-3UTR GCA 90 bp | CAACCTAAAAGCATCGAGGTCACTAGGCTTGAAACGAGAGGTGCCTCCTTCGGATTGGGTGCTGTTATTTaGGGCGCCGTTCTTTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: QPKSIEVTRLETRGASFGLGAVI*GAVLSE Trigger: CTCTGAAAGAACGGCGCCGCAAATAACAGCACCCAA...TCCGAAGGAGGCACCTCTCGTTTCAAGCCTAGTGACCTCGATGCTTTTAGGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000497577.2 ENST00000577703.1 |
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| CDS-3UTR GCA 90 bp | GAAGTTCTCCCTAAGCCTTCACGAAGCAAGCCAGAGCTCTCCAGTATGCTGCAATTGGGTGCTGTTATTTaGGGCGCCGTTCTTTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: EVLPKPSRSKPELSSMLQLGAVI*GAVLSE Trigger: CTCTGAAAGAACGGCGCCGCAAATAACAGCACCCAA...TTGCAGCATACTGGAGAGCTCTGGCTTGCTTCGTGAAGGCTTAGGGAGAACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000497577.2 ENST00000577703.1 |
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| CDS-3UTR CCA 90 bp | ATTGGGTGCTGTTATTTGCGGCGCCGTTCTTTCAGAGTTAGTTTGATACCGTTTCCGCGGAGAAGAACATaGCGGGCCACACTGTTCACC | + |
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Preference number: 4 (lower is better) Translates to: IGCCYLRRRSFRVSLIPFPRRRT*RATLFT Trigger: GGTGAACAGTGTGGCCCGCCATGTTCTTCTCCGCGG...AAACGGTATCAAACTAACTCTGAAAGAACGGCGCCGCAAATAACAGCACCCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000497577.2 ENST00000577703.1 |
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| CDS-3UTR GCA 90 bp | CAACCTAAAAGCATCGAGGTCACTAGGCTTGAAACGAGAGGTGCCTCCTTCGGAAGCTCTCCAGTATGCTaGAACCTAAAAGCATCGAGG | + |
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Preference number: 4 (lower is better) Translates to: QPKSIEVTRLETRGASFGSSPVC*NLKASR Trigger: CCTCGATGCTTTTAGGTTGCAGCATACTGGAGAGCT...TCCGAAGGAGGCACCTCTCGTTTCAAGCCTAGTGACCTCGATGCTTTTAGGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000497577.2 ENST00000577703.1 |
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| CDS-3UTR GCA 90 bp | CAACCTAAAAGCATCGAGGTCACTAGGCTTGAAACGAGAGGTGCCTCCTTCGGAGGTTCTTTAATTGGGTaGTGTTATTTGCGGCGCCGT | + |
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Preference number: 4 (lower is better) Translates to: QPKSIEVTRLETRGASFGGSLIG*CYLRRR Trigger: ACGGCGCCGCAAATAACAGCACCCAATTAAAGAACC...TCCGAAGGAGGCACCTCTCGTTTCAAGCCTAGTGACCTCGATGCTTTTAGGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000497577.2 ENST00000577703.1 |
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| CDS-3UTR GCA 90 bp | TTTTCCAGCCCTAATGAAGTTCTCCCTAAGCCTTCACGAAGCAAGCCAGAGCTCCAGAGCTCTCCAGTATaGTGCAACCTAAAAGCATCG | + |
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Preference number: 4 (lower is better) Translates to: FSSPNEVLPKPSRSKPELQSSPV*CNLKAS Trigger: CGATGCTTTTAGGTTGCAGCATACTGGAGAGCTCTG...GAGCTCTGGCTTGCTTCGTGAAGGCTTAGGGAGAACTTCATTAGGGCTGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000497577.2 ENST00000577703.1 |
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| CDS-3UTR CCA 90 bp | GTCTTCGAAACTGATCTGGCCAGAGCAGGCCTAGATTCTGCGCTACAGCAAAACCTGTGGTTCTTTAATTaGGTGCTGTTATTTGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: VFETDLARAGLDSALQQNLWFFN*VLLFAA Trigger: CGCCGCAAATAACAGCACCCAATTAAAGAACCACAG...GTTTTGCTGTAGCGCAGAATCTAGGCCTGCTCTGGCCAGATCAGTTTCGAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000577703.1 |
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| CDS-3UTR TCA 90 bp | CAACCTAAAAGCATCGAGGTCACTAGGCTTGAAACGAGAGGTGCCTCCTTCGGACCTCTTGCTGAGAACTaGCTTAACCTATTTCACTCT | + |
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Preference number: 4 (lower is better) Translates to: QPKSIEVTRLETRGASFGPLAEN*LNLFHS Trigger: AGAGTGAAATAGGTTAAGTCAGTTCTCAGCAAGAGG...TCCGAAGGAGGCACCTCTCGTTTCAAGCCTAGTGACCTCGATGCTTTTAGGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497577.2 |
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| CDS-3UTR CCA 90 bp | AAGCCTTCACGAAGCAAGCCAGAGCTCTCCAGTATGCTGCAACCTAAAAGCATCCTGTGGTTCTTTAATTaGGTGCTGTTATTTGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: KPSRSKPELSSMLQPKSILWFFN*VLLFAA Trigger: CGCCGCAAATAACAGCACCCAATTAAAGAACCACAG...GATGCTTTTAGGTTGCAGCATACTGGAGAGCTCTGGCTTGCTTCGTGAAGGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000497577.2 ENST00000577703.1 |
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| CDS-3UTR TCA 90 bp | CACGAAGCAAGCCAGAGCTCTCCAGTATGCTGCAACCTAAAAGCATCGAGGTCACTTTCAGAGTTAGTTTaGTACCGTTTATTTAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: HEASQSSPVCCNLKASRSLSELV*YRLFSQ Trigger: CTGGCTAAATAAACGGTATCAAACTAACTCTGAAAG...TGACCTCGATGCTTTTAGGTTGCAGCATACTGGAGAGCTCTGGCTTGCTTCGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000497577.2 ENST00000577703.1 |
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| CDS-3UTR TCA 90 bp | CCCTTTTCCAGCCCTAATGAAGTTCTCCCTAAGCCTTCACGAAGCAAGCCAGAGCTTTCAGAGTTAGTTTaGTACCGTTTATTTAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: PFSSPNEVLPKPSRSKPELSELV*YRLFSQ Trigger: CTGGCTAAATAAACGGTATCAAACTAACTCTGAAAG...CTCTGGCTTGCTTCGTGAAGGCTTAGGGAGAACTTCATTAGGGCTGGAAAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000497577.2 ENST00000577703.1 |
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| CDS-3UTR GCA 90 bp | ATTGGGTGCTGTTATTTGCGGCGCCGTTCTTTCAGAGTTAGTTTGATACCGTTTAGCTCTCCAGTATGCTaGAACCTAAAAGCATCGAGG | + |
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Preference number: 4 (lower is better) Translates to: IGCCYLRRRSFRVSLIPFSSPVC*NLKASR Trigger: CCTCGATGCTTTTAGGTTGCAGCATACTGGAGAGCT...AAACGGTATCAAACTAACTCTGAAAGAACGGCGCCGCAAATAACAGCACCCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000497577.2 ENST00000577703.1 |
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| CDS-3UTR CCA 90 bp | TTTTCCAGCCCTAATGAAGTTCTCCCTAAGCCTTCACGAAGCAAGCCAGAGCTCCCCATGAGATGTACTTaGATCTCAAAAAGATCATTT | + |
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Preference number: 4 (lower is better) Translates to: FSSPNEVLPKPSRSKPELPMRCT*ISKRSF Trigger: AAATGATCTTTTTGAGATCCAAGTACATCTCATGGG...GAGCTCTGGCTTGCTTCGTGAAGGCTTAGGGAGAACTTCATTAGGGCTGGAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000577703.1 |
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| CDS-3UTR GCA 90 bp | AACAAAACTAAGGCTTCTTTCCAGTATTACTTGTGTAACAGGCCCTGTTGTTATCAGAGCTCTCCAGTATaGTGCAACCTAAAAGCATCG | + |
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Preference number: 4 (lower is better) Translates to: NKTKASFQYYLCNRPCCYQSSPV*CNLKAS Trigger: CGATGCTTTTAGGTTGCAGCATACTGGAGAGCTCTG...ATAACAACAGGGCCTGTTACACAAGTAATACTGGAAAGAAGCCTTAGTTTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000497577.2 |
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| CDS-3UTR GCA 90 bp | ATTGGGTGCTGTTATTTGCGGCGCCGTTCTTTCAGAGTTAGTTTGATACCGTTTTATGCAAAGCACAACTaGAGTAAATCAAACATTGGC | + |
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Preference number: 4 (lower is better) Translates to: IGCCYLRRRSFRVSLIPFYAKHN*SKSNIG Trigger: GCCAATGTTTGATTTACTGCAGTTGTGCTTTGCATA...AAACGGTATCAAACTAACTCTGAAAGAACGGCGCCGCAAATAACAGCACCCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000497577.2 ENST00000577703.1 |
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| 3UTR CAA 72 bp | GAAGGAGTGTTTCAACTTCTCTGCAATTCAATTTCCTaGCCTACCATGAGATGTACTTGGATCTCAAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: EGVFQLLCNSIS*PTMRCTWISKR Trigger: TCTTTTTGAGATCCAAGTACATCTCATGGTAGGCAAGGAAATTGAATTGCAGAGAAGTTGAAACACTCCTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000497577.2 |
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| 3UTR CAA 72 bp | AAAACAAACAAAACTAAGGCTTCTTTCCAGTATTACTaGTGTAACAGGCCCTGTTGTTATAATCGACATTTC | + |
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Preference number: 4 (lower is better) Translates to: KTNKTKASFQYY*CNRPCCYNRHF Trigger: GAAATGTCGATTATAACAACAGGGCCTGTTACACAAGTAATACTGGAAAGAAGCCTTAGTTTTGTTTGTTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000497577.2 |
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| CDS-3UTR CAA 90 bp | CCTAAAAGCATCGAGGTCACTAGGCTTGAAACGAGAGGTGCCTCCTTCGGAGCGTCGAGGTCACTAGGCTaGAAACGAGAGGTGCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: PKSIEVTRLETRGASFGASRSLG*KREVPP Trigger: AGGAGGCACCTCTCGTTTCAAGCCTAGTGACCTCGA...CGCTCCGAAGGAGGCACCTCTCGTTTCAAGCCTAGTGACCTCGATGCTTTTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000497577.2 ENST00000577703.1 |
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| CDS-3UTR CAA 90 bp | GAGGTCACTAGGCTTGAAACGAGAGGTGCCTCCTTCGGAGCGACGGTCTTCGAAATTGGGTGCTGTTATTaGCGGCGCCGTTCTTTCAGA | + |
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Preference number: 5 (lower is better) Translates to: EVTRLETRGASFGATVFEIGCCY*RRRSFR Trigger: TCTGAAAGAACGGCGCCGCAAATAACAGCACCCAAT...TTCGAAGACCGTCGCTCCGAAGGAGGCACCTCTCGTTTCAAGCCTAGTGACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000497577.2 ENST00000577703.1 |
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| CDS-3UTR CAA 90 bp | CTTCACGAAGCAAGCCAGAGCTCTCCAGTATGCTGCAACCTAAAAGCATCGAGGTCGAGGTCACTAGGCTaGAAACGAGAGGTGCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: LHEASQSSPVCCNLKASRSRSLG*KREVPP Trigger: AGGAGGCACCTCTCGTTTCAAGCCTAGTGACCTCGA...CCTCGATGCTTTTAGGTTGCAGCATACTGGAGAGCTCTGGCTTGCTTCGTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000497577.2 ENST00000577703.1 |
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| CDS-3UTR CAA 90 bp | TCCAGCCCTAATGAAGTTCTCCCTAAGCCTTCACGAAGCAAGCCAGAGCTCTCCGCAGTAAATCAAACATaGGCCACCCTTTTCCAGCCC | + |
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Preference number: 5 (lower is better) Translates to: SSPNEVLPKPSRSKPELSAVNQT*ATLFQP Trigger: GGGCTGGAAAAGGGTGGCCAATGTTTGATTTACTGC...GGAGAGCTCTGGCTTGCTTCGTGAAGGCTTAGGGAGAACTTCATTAGGGCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000497577.2 ENST00000577703.1 |
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| CDS-3UTR CAA 90 bp | CCTAAAAGCATCGAGGTCACTAGGCTTGAAACGAGAGGTGCCTCCTTCGGAGCGTGCAATTCAATTTCCTaGCCTACCATGAGATGTACT | + |
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Preference number: 5 (lower is better) Translates to: PKSIEVTRLETRGASFGACNSIS*PTMRCT Trigger: AGTACATCTCATGGTAGGCAAGGAAATTGAATTGCA...CGCTCCGAAGGAGGCACCTCTCGTTTCAAGCCTAGTGACCTCGATGCTTTTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497577.2 |
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| CDS-3UTR CAA 90 bp | AGGTCACTAGGCTTGAAACGAGAGGTGCCTCCTTCGGAGCGACGGTCTTCGAAATCCCATGAGATGTACTaGGATCTCAAAAAGATCATT | + |
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Preference number: 5 (lower is better) Translates to: RSLGLKREVPPSERRSSKSHEMY*DLKKII Trigger: AATGATCTTTTTGAGATCCAAGTACATCTCATGGGA...TTTCGAAGACCGTCGCTCCGAAGGAGGCACCTCTCGTTTCAAGCCTAGTGACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000577703.1 |
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| CDS GCA 90 bp | CTCCAACAGCAGAGGGTGGCTTCTCATACATACCGATCTTTTTCTTaGCAACAAGACTTTAAGTTGTCCTTTCCACCTAGAATACCCTCG | + |
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Preference number: 5 (lower is better) Translates to: LQQQRVASHTYRSFS*QQDFKLSFPPRIPS Trigger: CGAGGGTATTCTAGGTGGAAAGGACAACTTAAAGTCTTGTTGGCAAGAAAAAGATCGGTATGTATGAGAAGCCACCCTCTGCTGTTGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000400033.1 |
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| CDS-3UTR CAA 90 bp | TTAATTGGGTGCTGTTATTTGCGGCGCCGTTCTTTCAGAGTTAGTTTGATACCGTACACTAGCTCCCTCTaGCTGAGAACTGACTTAACC | + |
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Preference number: 5 (lower is better) Translates to: LIGCCYLRRRSFRVSLIPYTSSL*LRTDLT Trigger: GGTTAAGTCAGTTCTCAGCAAGAGGGAGCTAGTGTA...CGGTATCAAACTAACTCTGAAAGAACGGCGCCGCAAATAACAGCACCCAATTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497577.2 |
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| CDS-3UTR CAA 90 bp | GTTTATTTAGCCAGCATTTCCGATATGCAAAGCACAACTGCAGTAAATCAAACAGCAGTAAATCAAACATaGGCCACCCTTTTCCAGCCC | + |
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Preference number: 5 (lower is better) Translates to: VYLASISDMQSTTAVNQTAVNQT*ATLFQP Trigger: GGGCTGGAAAAGGGTGGCCAATGTTTGATTTACTGC...TGTTTGATTTACTGCAGTTGTGCTTTGCATATCGGAAATGCTGGCTAAATAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000497577.2 ENST00000577703.1 |
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| CDS CCA 90 bp | TATTCTACCCTATCCATCTCTATTTCAGGAGAGTTATTTTACAAATaGAGATTCAAAGCCAAGATTCACCCACCTAACATCACACACACG | + |
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Preference number: 5 (lower is better) Translates to: YSTLSISISGELFYK*RFKAKIHPPNITHT Trigger: CGTGTGTGTGATGTTAGGTGGGTGAATCTTGGCTTTGAATCTCCATTTGTAAAATAACTCTCCTGAAATAGAGATGGATAGGGTAGAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000474350.5 |
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| CDS-3UTR CAA 90 bp | ACTTGTGTAACAGGCCCTGTTGTTATAATCGACATTTCTGGAAATCTGCATTTTTCTTTCCAGTATTACTaGTGTAACAGGCCCTGTTGT | + |
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Preference number: 5 (lower is better) Translates to: TCVTGPVVIIDISGNLHFSFQYY*CNRPCC Trigger: ACAACAGGGCCTGTTACACAAGTAATACTGGAAAGA...AAAATGCAGATTTCCAGAAATGTCGATTATAACAACAGGGCCTGTTACACAAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000497577.2 |
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| CDS GCA 72 bp | CAGGACAACCCAGATCTGCTGACTTGTGTACCTTCCTaGCACGCTCTGCTGGCATGCATTTGGAGAATTAAT | + |
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Preference number: 6 (lower is better) Translates to: QDNPDLLTCVPS*HALLACIWRIN Trigger: ATTAATTCTCCAAATGCATGCCAGCAGAGCGTGGCAGGAAGGTACACAAGTCAGCAGATCTGGGTTGTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000474350.5 ENST00000483511.1 |
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| CDS CCA 72 bp | AAACAAATTGTCTGTAAGGTCTCCAACAGCAGAGGGTaGCTTCTCATACATACCGATCTTTTTCTTGCCAAC | + |
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Preference number: 6 (lower is better) Translates to: KQIVCKVSNSRG*LLIHTDLFLAN Trigger: GTTGGCAAGAAAAAGATCGGTATGTATGAGAAGCCACCCTCTGCTGTTGGAGACCTTACAGACAATTTGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000400033.1 |
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