RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NDUFS7 (Homo sapiens)

Ensembl gene IDs: ENSG00000115286

Ensembl transcript IDs: ENST00000233627.14, ENST00000313408.11, ENST00000414651.3, ENST00000436115.6, ENST00000534853.5, ENST00000535382.1, ENST00000538523.5, ENST00000538662.5, ENST00000539480.5, ENST00000539882.1, ENST00000540530.5, ENST00000543289.5, ENST00000545446.5, ENST00000546172.7, ENST00000546283.5, ENST00000591358.1, ENST00000618074.4, ENST00000620479.4, ENST00000622587.4

Found 644 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCAGGGCAGGCTGGGTGCTGCTTGGGCCATCGGTGGCCACGCTCTaGTGGACACCTCGTGCCTGCACAGCCGGGCCCACGCTGGAGCGC +
Preference number: 1 (lower is better)
Translates to: GRAGWVLLGPSVATL*WTPRACTAGPTLER
Trigger: GCGCTCCAGCGTGGGCCCGGCTGTGCAGGCACGAGGTGTCCATCAGAGCGTGGCCACCGATGGCCCAAGCAGCACCCAGCCTGCCCTGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546172.7
3UTR GCA 90 bp CTTGCCTCAGTCTCGCTTCCCGCAGCCGGAGCCCGCGTGACCGCGTaGACAGCGCAGCCGGCTCGGCTTTGGAAGGGTTTCCCGGGCCGG +
Preference number: 1 (lower is better)
Translates to: LASVSLPAAGARVTA*TAQPARLWKGFPGR
Trigger: CCGGCCCGGGAAACCCTTCCAAAGCCGAGCCGGCTGCGCTGTGCACGCGGTCACGCGGGCTCCGGCTGCGGGAAGCGAGACTGAGGCAAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
3UTR CCA 90 bp GCCGGAGCCCGCGTGACCGCGTGCACAGCGCAGCCGGCTCGGCTTTaGAAGGGTTTCCCGGGCCGGCCTCTGAAGGTGGAGGCTGACAGC +
Preference number: 1 (lower is better)
Translates to: AGARVTACTAQPARL*KGFPGRPLKVEADS
Trigger: GCTGTCAGCCTCCACCTTCAGAGGCCGGCCCGGGAAACCCTTCCAAAGCCGAGCCGGCTGCGCTGTGCACGCGGTCACGCGGGCTCCGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
3UTR TCA 90 bp TCGGCTTTGGAAGGGTTTCCCGGGCCGGCCTCTGAAGGTGGAGGCTaGCAGCCCTGGGTGGGCGCAGTGCCAGGGACTGGGAGCCGGCGC +
Preference number: 1 (lower is better)
Translates to: SALEGFPGPASEGGG*QPWVGAVPGTGSRR
Trigger: GCGCCGGCTCCCAGTCCCTGGCACTGCGCCCACCCAGGGCTGTCAGCCTCCACCTTCAGAGGCCGGCCCGGGAAACCCTTCCAAAGCCGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
3UTR TCA 90 bp GCAGGGACCTTGCCTCAGTCTCGCTTCCCGCAGCCGGAGCCCGCGTaGCCGCGTGCACAGCGCAGCCGGCTCGGCTTTGGAAGGGTTTCC +
Preference number: 1 (lower is better)
Translates to: AGTLPQSRFPQPEPA*PRAQRSRLGFGRVS
Trigger: GGAAACCCTTCCAAAGCCGAGCCGGCTGCGCTGTGCACGCGGTCACGCGGGCTCCGGCTGCGGGAAGCGAGACTGAGGCAAGGTCCCTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
3UTR GCA 90 bp GGTGCTGCTTGGGCCATCGGTGGCCACGCTCTGATGGACACCTCGTaGCTGCACAGCCGGGCCCACGCTGGAGCGCAGACCAAGGATCCG +
Preference number: 1 (lower is better)
Translates to: GAAWAIGGHALMDTS*LHSRAHAGAQTKDP
Trigger: CGGATCCTTGGTCTGCGCTCCAGCGTGGGCCCGGCTGTGCAGGCACGAGGTGTCCATCAGAGCGTGGCCACCGATGGCCCAAGCAGCACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546172.7
3UTR CCA 90 bp GACAAGGCCACTGCAGGGCCTGGGAAAGGGCGGCCAGGCCCCACCTaGCAGAGCTCTGGCAAGTCCAGGCTGCTCCAAGGGAGGGAGAAG +
Preference number: 1 (lower is better)
Translates to: DKATAGPGKGRPGPT*QSSGKSRLLQGREK
Trigger: CTTCTCCCTCCCTTGGAGCAGCCTGGACTTGCCAGAGCTCTGCCAGGTGGGGCCTGGCCGCCCTTTCCCAGGCCCTGCAGTGGCCTTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
3UTR GCA 90 bp CCAGGGGCATGGGCAGAGCTCCTGACCCCAGGATGGACCTCTCTGTaGTGTCAAGTCACAGGGAGGCCCAGGCTGCCCTCTCCACTGCCC +
Preference number: 1 (lower is better)
Translates to: PGAWAELLTPGWTSL*CQVTGRPRLPSPLP
Trigger: GGGCAGTGGAGAGGGCAGCCTGGGCCTCCCTGTGACTTGACAGCACAGAGAGGTCCATCCTGGGGTCAGGAGCTCTGCCCATGCCCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR GCA 90 bp GGCGCGGAAGACCACGCCAAAGCGGTCCATGTCGTAGCGGGGTGCTaGCATGTGCATCATCTCCACGGCGCAGCAGGCCAGGCCGAAGGT +
Preference number: 1 (lower is better)
Translates to: GAEDHAKAVHVVAGC*HVHHLHGAAGQAEG
Trigger: ACCTTCGGCCTGGCCTGCTGCGCCGTGGAGATGATGCACATGGCAGCACCCCGCTACGACATGGACCGCTTTGGCGTGGTCTTCCGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
3UTR GCA 90 bp GCTGGCGCGGAAGACCACGCCAAAGCGGTCCATGTCGTAGCGGGGTaGTGCCATGTGCATCATCTCCACGGCGCAGCAGGCCAGGCCGAA +
Preference number: 1 (lower is better)
Translates to: AGAEDHAKAVHVVAG*CHVHHLHGAAGQAE
Trigger: TTCGGCCTGGCCTGCTGCGCCGTGGAGATGATGCACATGGCAGCACCCCGCTACGACATGGACCGCTTTGGCGTGGTCTTCCGCGCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
3UTR GCA 90 bp TTCATTTGCCAAATCCGGCCACCCCGGGTCCCAGGGAGTCCTGCGTaGCCTTCTGTAAGGCTGAGGGCGCGGGACAGTGTCCTTGGCCCC +
Preference number: 1 (lower is better)
Translates to: FICQIRPPRVPGSPA*PSVRLRARDSVLGP
Trigger: GGGGCCAAGGACACTGTCCCGCGCCCTCAGCCTTACAGAAGGGCACGCAGGACTCCCTGGGACCCGGGGTGGCCGGATTTGGCAAATGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR CCA 90 bp GCCATCTTGTTGGTGAGTGTGCCGGCCACGATCATGACGTCGGACTaGCGCGGGCTGGCGCGGAAGACCACGCCAAAGCGGTCCATGTCG +
Preference number: 1 (lower is better)
Translates to: AILLVSVPATIMTSD*RGLARKTTPKRSMS
Trigger: CGACATGGACCGCTTTGGCGTGGTCTTCCGCGCCAGCCCGCGCCAGTCCGACGTCATGATCGTGGCCGGCACACTCACCAACAAGATGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
3UTR TCA 90 bp GCCCAAACCCCCAGACTCGGGACTCAGGGCTGGGCTCTCTGCGCATaGGCTAATGCCGCACGCAGCACAGGGTGGCCAAGAACAGGACTC +
Preference number: 1 (lower is better)
Translates to: AQTPRLGTQGWALCA*ANAARSTGWPRTGL
Trigger: GAGTCCTGTTCTTGGCCACCCTGTGCTGCGTGCGGCATTAGCTCATGCGCAGAGAGCCCAGCCCTGAGTCCCGAGTCTGGGGGTTTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR GCA 90 bp GCAGGGAGGGAGGAGCGCGGTCCCCAGGGAGGGAGGAGCTCAGTCTaGAAGGAGGGAGGAGTACAGTCCACACTCGCAACTTGCCCCATT +
Preference number: 1 (lower is better)
Translates to: AGREERGPQGGRSSV*KEGGVQSTLATCPI
Trigger: AATGGGGCAAGTTGCGAGTGTGGACTGTACTCCTCCCTCCTTGCAGACTGAGCTCCTCCCTCCCTGGGGACCGCGCTCCTCCCTCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR GCA 90 bp CGTTTTCATTTGCCAAATCCGGCCACCCCGGGTCCCAGGGAGTCCTaGGTGCCCTTCTGTAAGGCTGAGGGCGCGGGACAGTGTCCTTGG +
Preference number: 1 (lower is better)
Translates to: RFHLPNPATPGPRES*VPFCKAEGAGQCPW
Trigger: CCAAGGACACTGTCCCGCGCCCTCAGCCTTACAGAAGGGCACGCAGGACTCCCTGGGACCCGGGGTGGCCGGATTTGGCAAATGAAAACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR GCA 90 bp AGCTCAGTCTGCAAGGAGGGAGGAGTACAGTCCACACTCGCAACTTaGCCCATTGGTCTGCACTGCAGGGGAAGACGCCAGGGGCATGGG +
Preference number: 1 (lower is better)
Translates to: SSVCKEGGVQSTLAT*PIGLHCRGRRQGHG
Trigger: CCCATGCCCCTGGCGTCTTCCCCTGCAGTGCAGACCAATGGGGCAAGTTGCGAGTGTGGACTGTACTCCTCCCTCCTTGCAGACTGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR GCA 90 bp CCAAAGTCAGAGCCTGTTCCTCCACTTTTGAGAGGCACCAGGATGTaGCTCTCGCTTGCCCAAACCCCCAGACTCGGGACTCAGGGCTGG +
Preference number: 1 (lower is better)
Translates to: PKSEPVPPLLRGTRM*LSLAQTPRLGTQGW
Trigger: CCAGCCCTGAGTCCCGAGTCTGGGGGTTTGGGCAAGCGAGAGGCACATCCTGGTGCCTCTCAAAAGTGGAGGAACAGGCTCTGACTTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR TCA 90 bp TGCCCTCTCCACTGCCCCCGGGGTGACCTGAACCGTGCAGAACGCTaGACAAATCAACGCCCTTTCCAGGGAAGCGGAATCCAAAGTCAG +
Preference number: 1 (lower is better)
Translates to: CPLHCPRGDLNRAER*TNQRPFQGSGIQSQ
Trigger: CTGACTTTGGATTCCGCTTCCCTGGAAAGGGCGTTGATTTGTTCAGCGTTCTGCACGGTTCAGGTCACCCCGGGGGCAGTGGAGAGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR CCA 90 bp TCCTGCGTGCCCTTCTGTAAGGCTGAGGGCGCGGGACAGTGTCCTTaGCCCCCAGGAACCTTCTCGCTTGGTATTTCTAACTGCAGGTCT +
Preference number: 1 (lower is better)
Translates to: SCVPFCKAEGAGQCP*PPGTFSLGISNCRS
Trigger: AGACCTGCAGTTAGAAATACCAAGCGAGAAGGTTCCTGGGGGCCAAGGACACTGTCCCGCGCCCTCAGCCTTACAGAAGGGCACGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR TCA 90 bp TTCCAGGGAAGCGGAATCCAAAGTCAGAGCCTGTTCCTCCACTTTTaGGAGGCACCAGGATGTGCCTCTCGCTTGCCCAAACCCCCAGAC +
Preference number: 1 (lower is better)
Translates to: FQGSGIQSQSLFLHF*EAPGCASRLPKPPD
Trigger: GTCTGGGGGTTTGGGCAAGCGAGAGGCACATCCTGGTGCCTCTCAAAAGTGGAGGAACAGGCTCTGACTTTGGATTCCGCTTCCCTGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR TCA 90 bp GTATTTCTAACTGCAGGTCTTTGGTTTGTGCCAGGTAGGACCATATaGAACTGCTGTAAACCAGGCGTGTGTCAGGAATTCCACTCAGCT +
Preference number: 1 (lower is better)
Translates to: VFLTAGLWFVPGRTI*NCCKPGVCQEFHSA
Trigger: AGCTGAGTGGAATTCCTGACACACGCCTGGTTTACAGCAGTTTCATATGGTCCTACCTGGCACAAACCAAAGACCTGCAGTTAGAAATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR GCA 90 bp GTGCAAGAGTCCCACGGGATCACCAGATATAAAGAATGTTCCCGGTaGGATGTGAATTTCAGGTATGCAGCCAATGCTCTTTTTAGTGTC +
Preference number: 1 (lower is better)
Translates to: VQESHGITRYKECSR*DVNFRYAANALFSV
Trigger: GACACTAAAAAGAGCATTGGCTGCATACCTGAAATTCACATCGCACCGGGAACATTCTTTATATCTGGTGATCCCGTGGGACTCTTGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR-3UTR GCA 90 bp AAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTGGGGAGCCCGCCGTCTaGTGGGGGTGTGGGACTCCC +
Preference number: 2 (lower is better)
Translates to: KQAGDRTATGSGGGGGGAGEPAV*WGCGTP
Trigger: GGGAGTCCCACACCCCCAGCAGACGGCGGGCTCCCC...AGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR-3UTR GCA 90 bp GGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACTGGGCAAGGCCCCACTaGCCTCCACCCGTGGCTCAT +
Preference number: 2 (lower is better)
Translates to: GQDGDRLRRRRRRRYLRYWARPH*PPPVAH
Trigger: ATGAGCCACGGGTGGAGGGCAGTGGGGCCTTGCCCA...GTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
3UTR-3UTR GCA 90 bp GGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCAGCCTCCGCTCCCTGGACACCTCGTGCCTaGACAGCCGGGCCCACGCTG +
Preference number: 2 (lower is better)
Translates to: GGGGGGATCGTRSAASAPWTPRA*TAGPTL
Trigger: CAGCGTGGGCCCGGCTGTGCAGGCACGAGGTGTCCA...GGGAGCGGAGGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546172.7
3UTR-3UTR CCA 90 bp GGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCAGCCTCCGCTCCCGCTCGGACTGGCGCGGGCTaGCGCGGAAGACCACGCCAA +
Preference number: 2 (lower is better)
Translates to: GGGGGATCGTRSAASAPARTGAG*RGRPRQ
Trigger: TTGGCGTGGTCTTCCGCGCCAGCCCGCGCCAGTCCG...AGCGGGAGCGGAGGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
3UTR-3UTR GCA 90 bp GGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCAGCCTCCGCTCCCCATACTCGCCCCGGCTaGTGGGTTTGGGAGCCACGG +
Preference number: 2 (lower is better)
Translates to: GGGGGGATCGTRSAASAPHTRPG*WVWEPR
Trigger: CCGTGGCTCCCAAACCCAGCAGCCGGGGCGAGTATG...GGGAGCGGAGGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546172.7
3UTR-3UTR CCA 90 bp ACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGGCCCATCCATAGGATaGGGGAGCCCGCCGTCTGCT +
Preference number: 2 (lower is better)
Translates to: TGRRQAPAAAAAALPAVPGPSIG*GSPPSA
Trigger: AGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCC...TGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR-3UTR CCA 90 bp CGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCAGCCTCCGCTCCGCCAGAGCTCTTTGCTaGGGATCCCCCAGTCCCGGC +
Preference number: 2 (lower is better)
Translates to: RRRRRRRYLRYQICSLRSARALC*GSPSPG
Trigger: GCCGGGACTGGGGGATCCCCAGCAAAGAGCTCTGGC...GGAGCGGAGGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
3UTR-3UTR GCA 90 bp CGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCAGTGTCCACGGGCACGATaGGGTCGCAGCCCCTCACCA +
Preference number: 2 (lower is better)
Translates to: RQAPAAAAAALPAVPDLQCPRAR*GRSPSP
Trigger: TGGTGAGGGGCTGCGACCGCATCGTGCCCGTGGACA...CTGCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
3UTR-3UTR GCA 90 bp ACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTTGTCCACGGGCACGATaGGGTCGCAGCCCCTCACCA +
Preference number: 2 (lower is better)
Translates to: TATGSGGGGGGATCGTRSCPRAR*GRSPSP
Trigger: TGGTGAGGGGCTGCGACCGCATCGTGCCCGTGGACA...AGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
3UTR-3UTR GCA 90 bp CGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCAGCTGATGGACACCTCGTaGCTGCACAGCCGGGCCCAC +
Preference number: 2 (lower is better)
Translates to: RQAPAAAAAALPAVPDLQLMDTS*LHSRAH
Trigger: GTGGGCCCGGCTGTGCAGGCACGAGGTGTCCATCAG...CTGCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546172.7
3UTR-3UTR CCA 90 bp CGCAGCCGGAGCCCGCGTGACCGCGTGCACAGCGCAGCCGGCTCGGCTTTGGAAGCTGACAGCCCTGGGTaGGCGCAGTGCCAGGGACTG +
Preference number: 2 (lower is better)
Translates to: RSRSPRDRVHSAAGSALEADSPG*AQCQGL
Trigger: CAGTCCCTGGCACTGCGCCCACCCAGGGCTGTCAGC...TTCCAAAGCCGAGCCGGCTGCGCTGTGCACGCGGTCACGCGGGCTCCGGCTGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
3UTR-3UTR CCA 90 bp GGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCAGCCTCCGCTCCCGGCCTCGGCCGTAGGTaGGCAGCCTGGGATGTAGAT +
Preference number: 2 (lower is better)
Translates to: GGGGGGATCGTRSAASAPGLGRR*AAWDVD
Trigger: ATCTACATCCCAGGCTGCCCACCTACGGCCGAGGCC...GGGAGCGGAGGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
3UTR-3UTR CCA 90 bp AAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTCGCAACTTGCCCCATTaGTCTGCACTGCAGGGGAAG +
Preference number: 2 (lower is better)
Translates to: KQAGDRTATGSGGGGGGARNLPH*SALQGK
Trigger: CTTCCCCTGCAGTGCAGACCAATGGGGCAAGTTGCG...AGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR-3UTR CCA 90 bp GGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACGACCTTGCGAAGCGCTaGGGCCATCTTGTTGGTGAG +
Preference number: 2 (lower is better)
Translates to: GQDGDRLRRRRRRRYLRYDLAKR*GHLVGE
Trigger: CTCACCAACAAGATGGCCCCAGCGCTTCGCAAGGTC...GTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
3UTR-3UTR TCA 90 bp AAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTCTGTTCCTCCACTTTTaGGAGGCACCAGGATGTGCC +
Preference number: 2 (lower is better)
Translates to: KQAGDRTATGSGGGGGGALFLHF*EAPGCA
Trigger: GGCACATCCTGGTGCCTCTCAAAAGTGGAGGAACAG...AGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR-3UTR TCA 90 bp CAGGCCAGGCCGAAGGTCATGGGCCACAGAGAACTCCGGCGGGCCCAGTTGACGTGCCGGCCACGATCATaGCGTCGGACTGGCGCGGGC +
Preference number: 2 (lower is better)
Translates to: QARPKVMGHRELRRAQLTCRPRS*RRTGAG
Trigger: GCCCGCGCCAGTCCGACGTCATGATCGTGGCCGGCA...CGTCAACTGGGCCCGCCGGAGTTCTCTGTGGCCCATGACCTTCGGCCTGGCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
3UTR-3UTR CCA 90 bp ACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTCACCTGGCAGAGCTCTaGCAAGTCCAGGCTGCTCCA +
Preference number: 2 (lower is better)
Translates to: TATGSGGGGGGATCGTRSHLAEL*QVQAAP
Trigger: TGGAGCAGCCTGGACTTGCCAGAGCTCTGCCAGGTG...AGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGT
70% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
3UTR-3UTR CCA 90 bp ACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTCGTAGGTGGGCAGCCTaGGATGTAGATGTCCACGGG +
Preference number: 2 (lower is better)
Translates to: TATGSGGGGGGATCGTRSRRWAA*DVDVHG
Trigger: CCCGTGGACATCTACATCCCAGGCTGCCCACCTACG...AGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
3UTR-3UTR GCA 90 bp CGCGTGACCGCGTGCACAGCGCAGCCGGCTCGGCTTTGGAAGGGTTTCCCGGGCGGTCCCAGGGAGTCCTaGGTGCCCTTCTGTAAGGCT +
Preference number: 2 (lower is better)
Translates to: RVTACTAQPARLWKGFPGGPRES*VPFCKA
Trigger: AGCCTTACAGAAGGGCACGCAGGACTCCCTGGGACC...GCCCGGGAAACCCTTCCAAAGCCGAGCCGGCTGCGCTGTGCACGCGGTCACGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR-3UTR CCA 90 bp AAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTCTAACTGCAGGTCTTTaGTTTGTGCCAGGTAGGACC +
Preference number: 2 (lower is better)
Translates to: KQAGDRTATGSGGGGGGALTAGL*FVPGRT
Trigger: GGTCCTACCTGGCACAAACCAAAGACCTGCAGTTAG...AGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR-3UTR CCA 90 bp CAGGGCCTCGGCCGTAGGTGGGCAGCCTGCAGGGACCTTGCCTCAGTCTCGCTTACTGCCCTCCACCCGTaGCTCATCCCGGGCTGTCAC +
Preference number: 2 (lower is better)
Translates to: QGLGRRWAACRDLASVSLTALHP*LIPGCH
Trigger: GTGACAGCCCGGGATGAGCCACGGGTGGAGGGCAGT...AAGCGAGACTGAGGCAAGGTCCCTGCAGGCTGCCCACCTACGGCCGAGGCCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
3UTR-3UTR CCA 90 bp TCCTCCGTTGGCGCAGCTCCCCATGGAGACCACGTAGCGCGGCTCCGGCATCTGTGGCGCAGCTCCCCATaGAGACCACGTAGCGCGGCT +
Preference number: 2 (lower is better)
Translates to: SSVGAAPHGDHVARLRHLWRSSP*RPRSAA
Trigger: AGCCGCGCTACGTGGTCTCCATGGGGAGCTGCGCCA...CAGATGCCGGAGCCGCGCTACGTGGTCTCCATGGGGAGCTGCGCCAACGGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
3UTR-3UTR CCA 90 bp CGCAGCTCCCCATGGAGACCACGTAGCGCGGCTCCGGCATCTGGTCGTAGACCTACTCGCCCCGGCTGCTaGGTTTGGGAGCCACGGCTC +
Preference number: 2 (lower is better)
Translates to: RSSPWRPRSAAPASGRRPTRPGC*VWEPRL
Trigger: GAGCCGTGGCTCCCAAACCCAGCAGCCGGGGCGAGT...AGGTCTACGACCAGATGCCGGAGCCGCGCTACGTGGTCTCCATGGGGAGCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546172.7
3UTR CAA 90 bp AGGTCATCCAGCTTGGCCACCACATACTCGCCCCGGCTGCTGGGTTaGGGAGCCACGGCTCTGGCCTTTGGCAGGGCAGGCTGGGTGCTG +
Preference number: 2 (lower is better)
Translates to: RSSSLATTYSPRLLG*GATALAFGRAGWVL
Trigger: CAGCACCCAGCCTGCCCTGCCAAAGGCCAGAGCCGTGGCTCCCAAACCCAGCAGCCGGGGCGAGTATGTGGTGGCCAAGCTGGATGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546172.7
3UTR-3UTR TCA 90 bp GCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCACGAGGGCAGGTTTATTaGCAACCTCACGGGACACAA +
Preference number: 2 (lower is better)
Translates to: ATGSGGGGGGATCGTRSARGQVY*QPHGTQ
Trigger: TTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCG...TGCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
3UTR-3UTR TCA 90 bp GGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCAACCGTGCAGAACGCTaGACAAATCAACGCCCTTTC +
Preference number: 2 (lower is better)
Translates to: GDRLRRRRRRRYLRYQICNRAER*TNQRPF
Trigger: GAAAGGGCGTTGATTTGTTCAGCGTTCTGCACGGTT...GCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR-3UTR CCA 90 bp TCCTCCGTTGGCGCAGCTCCCCATGGAGACCACGTAGCGCGGCTCCGGCATCTGTTTGGCAGGGCAGGCTaGGTGCTGCTTGGGCCATCG +
Preference number: 2 (lower is better)
Translates to: SSVGAAPHGDHVARLRHLFGRAG*VLLGPS
Trigger: CGATGGCCCAAGCAGCACCCAGCCTGCCCTGCCAAA...CAGATGCCGGAGCCGCGCTACGTGGTCTCCATGGGGAGCTGCGCCAACGGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546172.7
3UTR-3UTR GCA 90 bp GCAGCCTGGGATGTAGATGTCCACGGGCACGATGCGGTCGCAGCCCCTCACCACCGGGGTGCTGCCATGTaGATCATCTCCACGGCGCAG +
Preference number: 2 (lower is better)
Translates to: AAWDVDVHGHDAVAAPHHRGAAM*IISTAQ
Trigger: CTGCGCCGTGGAGATGATGCACATGGCAGCACCCCG...GTGGTGAGGGGCTGCGACCGCATCGTGCCCGTGGACATCTACATCCCAGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
3UTR-3UTR CCA 90 bp GCAGCTCCCCATGGAGACCACGTAGCGCGGCTCCGGCATCTGGTCGTAGACCTTGGGACACAAGCAGGCTaGGGACAGGACGGCGACAGG +
Preference number: 2 (lower is better)
Translates to: AAPHGDHVARLRHLVVDLGTQAG*GQDGDR
Trigger: CCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCC...AAGGTCTACGACCAGATGCCGGAGCCGCGCTACGTGGTCTCCATGGGGAGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
3UTR-3UTR CCA 90 bp CGCAGCCCCTCACCACCGAGTAGGAATAGTGGTAGTAGCCTCCTCCGTTGGCGCAGGCTGGGTGCTGCTTaGGCCATCGGTGGCCACGCT +
Preference number: 2 (lower is better)
Translates to: RSPSPPSRNSGSSLLRWRRLGAA*AIGGHA
Trigger: AGCGTGGCCACCGATGGCCCAAGCAGCACCCAGCCT...GCGCCAACGGAGGAGGCTACTACCACTATTCCTACTCGGTGGTGAGGGGCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546172.7
3UTR-3UTR TCA 90 bp GATGCGGTCGCAGCCCCTCACCACCGAGTAGGAATAGTGGTAGTAGCCTCCTCCTCGGTGGCCACGCTCTaGTGGACACCTCGTGCCTGC +
Preference number: 2 (lower is better)
Translates to: DAVAAPHHRVGIVVVASSSVATL*WTPRAC
Trigger: GCAGGCACGAGGTGTCCATCAGAGCGTGGCCACCGA...GGAGGAGGCTACTACCACTATTCCTACTCGGTGGTGAGGGGCTGCGACCGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546172.7
3UTR-3UTR GCA 90 bp CATCCCGGGCTGTCACAGGGACCTCTCGGACAAGACGCTGACCTCACTAACCCGCGCCACCTCCAAGCCTaGCTACCGTGGACCACTGTC +
Preference number: 2 (lower is better)
Translates to: HPGLSQGPLGQDADLTNPRHLQA*LPWTTV
Trigger: GACAGTGGTCCACGGTAGGCAGGCTTGGAGGTGGCG...CGGGTTAGTGAGGTCAGCGTCTTGTCCGAGAGGTCCCTGTGACAGCCCGGGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR-3UTR GCA 90 bp CGCAGCCCCTCACCACCGAGTAGGAATAGTGGTAGTAGCCTCCTCCGTTGGCGCCGGGGTGCTGCCATGTaGATCATCTCCACGGCGCAG +
Preference number: 2 (lower is better)
Translates to: RSPSPPSRNSGSSLLRWRRGAAM*IISTAQ
Trigger: CTGCGCCGTGGAGATGATGCACATGGCAGCACCCCG...GCGCCAACGGAGGAGGCTACTACCACTATTCCTACTCGGTGGTGAGGGGCTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
3UTR-3UTR GCA 90 bp GGCAGCCTGGGATGTAGATGTCCACGGGCACGATGCGGTCGCAGCCCCTCACCACATGTCGTAGCGGGGTaGTGCCATGTGCATCATCTC +
Preference number: 2 (lower is better)
Translates to: GSLGCRCPRARCGRSPSPHVVAG*CHVHHL
Trigger: GAGATGATGCACATGGCAGCACCCCGCTACGACATG...TGGTGAGGGGCTGCGACCGCATCGTGCCCGTGGACATCTACATCCCAGGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
3UTR-3UTR CCA 90 bp CATGTCGTAGCGGGGTGCTGCCATGTGCATCATCTCCACGGCGCAGCAGGCCAGGACCTTGCGAAGCGCTaGGGCCATCTTGTTGGTGAG +
Preference number: 2 (lower is better)
Translates to: HVVAGCCHVHHLHGAAGQDLAKR*GHLVGE
Trigger: CTCACCAACAAGATGGCCCCAGCGCTTCGCAAGGTC...CTGGCCTGCTGCGCCGTGGAGATGATGCACATGGCAGCACCCCGCTACGACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
3UTR-3UTR TCA 90 bp GCGGTCGCAGCCCCTCACCACCGAGTAGGAATAGTGGTAGTAGCCTCCTCCGTTGGGCCATCTTGTTGGTaGGTGTGCCGGCCACGATCA +
Preference number: 2 (lower is better)
Translates to: AVAAPHHRVGIVVVASSVGPSCW*VCRPRS
Trigger: TGATCGTGGCCGGCACACTCACCAACAAGATGGCCC...AACGGAGGAGGCTACTACCACTATTCCTACTCGGTGGTGAGGGGCTGCGACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
3UTR-3UTR GCA 90 bp CATCCCGGGCTGTCACAGGGACCTCTCGGACAAGACGCTGACCTCACTAACCCGTGGGACCACGTGAGGTaGAAGAGTCCCACGGGATCA +
Preference number: 2 (lower is better)
Translates to: HPGLSQGPLGQDADLTNPWDHVR*KSPTGS
Trigger: TGATCCCGTGGGACTCTTGCACCTCACGTGGTCCCA...CGGGTTAGTGAGGTCAGCGTCTTGTCCGAGAGGTCCCTGTGACAGCCCGGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR-3UTR GCA 90 bp AGCGCTGGGGCCATCTTGTTGGTGAGTGTGCCGGCCACGATCATGACGTCGGACTCTGGTCGTAGACCTTaGGAAGCGCTGGGGCCATCT +
Preference number: 2 (lower is better)
Translates to: SAGAILLVSVPATIMTSDSGRRP*EALGPS
Trigger: AGATGGCCCCAGCGCTTCGCAAGGTCTACGACCAGA...GTCCGACGTCATGATCGTGGCCGGCACACTCACCAACAAGATGGCCCCAGCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
3UTR-3UTR CCA 90 bp CGGCATCTGGTCGTAGACCTTGCGAAGCGCTGGGGCCATCTTGTTGGTGAGTGTTGCTTGGGCCATCGGTaGCCACGCTCTGATGGACAC +
Preference number: 2 (lower is better)
Translates to: RHLVVDLAKRWGHLVGECCLGHR*PRSDGH
Trigger: GTGTCCATCAGAGCGTGGCCACCGATGGCCCAAGCA...ACACTCACCAACAAGATGGCCCCAGCGCTTCGCAAGGTCTACGACCAGATGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546172.7
3UTR-3UTR TCA 90 bp AGCGCTGGGGCCATCTTGTTGGTGAGTGTGCCGGCCACGATCATGACGTCGGACCGAGGGCAGGTTTATTaGCAACCTCACGGGACACAA +
Preference number: 2 (lower is better)
Translates to: SAGAILLVSVPATIMTSDRGQVY*QPHGTQ
Trigger: TTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCG...GTCCGACGTCATGATCGTGGCCGGCACACTCACCAACAAGATGGCCCCAGCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
3UTR-3UTR GCA 90 bp GTGCACAGCGCAGCCGGCTCGGCTTTGGAAGGGTTTCCCGGGCCGGCCTCTGAACAGGTCTTTGGTTTGTaGCAGGTAGGACCATATGAA +
Preference number: 2 (lower is better)
Translates to: VHSAAGSALEGFPGPASEQVFGL*QVGPYE
Trigger: TTCATATGGTCCTACCTGGCACAAACCAAAGACCTG...TTCAGAGGCCGGCCCGGGAAACCCTTCCAAAGCCGAGCCGGCTGCGCTGTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR-3UTR CCA 90 bp AGGGAAGCGGAATCCAAAGTCAGAGCCTGTTCCTCCACTTTTGAGAGGCACCAGGGGACACAAGCAGGCTaGGGACAGGACGGCGACAGG +
Preference number: 2 (lower is better)
Translates to: REAESKVRACSSTFERHQGTQAG*GQDGDR
Trigger: CCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCC...CTGGTGCCTCTCAAAAGTGGAGGAACAGGCTCTGACTTTGGATTCCGCTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR CAA 90 bp CTGAGGGCGCGGGACAGTGTCCTTGGCCCCCAGGAACCTTCTCGCTaGGTATTTCTAACTGCAGGTCTTTGGTTTGTGCCAGGTAGGACC +
Preference number: 2 (lower is better)
Translates to: LRARDSVLGPQEPSR*VFLTAGLWFVPGRT
Trigger: GGTCCTACCTGGCACAAACCAAAGACCTGCAGTTAGAAATACCAAGCGAGAAGGTTCCTGGGGGCCAAGGACACTGTCCCGCGCCCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR CAA 90 bp TTTCCAGGGAAGCGGAATCCAAAGTCAGAGCCTGTTCCTCCACTTTaGAGAGGCACCAGGATGTGCCTCTCGCTTGCCCAAACCCCCAGA +
Preference number: 2 (lower is better)
Translates to: FPGKRNPKSEPVPPL*RGTRMCLSLAQTPR
Trigger: TCTGGGGGTTTGGGCAAGCGAGAGGCACATCCTGGTGCCTCTCAAAAGTGGAGGAACAGGCTCTGACTTTGGATTCCGCTTCCCTGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR-3UTR CAA 90 bp ACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCAGCCGGCTCGGCTTaGGAAGGGTTTCCCGGGCCG +
Preference number: 3 (lower is better)
Translates to: TATGSGGGGGGATCGTRSAAGSA*EGFPGP
Trigger: CGGCCCGGGAAACCCTTCCAAAGCCGAGCCGGCTGC...AGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
3UTR-3UTR CAA 90 bp ACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGCTGGGGCCATCTTGTaGGTGAGTGTGCCGGCCACG +
Preference number: 3 (lower is better)
Translates to: TGRRQAPAAAAAALPAVPAGAIL*VSVPAT
Trigger: CGTGGCCGGCACACTCACCAACAAGATGGCCCCAGC...TGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
3UTR TCA 72 bp GGCTGGGTGCTGCTTGGGCCATCGGTGGCCACGCTCTaGTGGACACCTCGTGCCTGCACAGCCGGGCCCACG +
Preference number: 3 (lower is better)
Translates to: GWVLLGPSVATL*WTPRACTAGPT
Trigger: CGTGGGCCCGGCTGTGCAGGCACGAGGTGTCCATCAGAGCGTGGCCACCGATGGCCCAAGCAGCACCCAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546172.7
3UTR GCA 72 bp GTCTCGCTTCCCGCAGCCGGAGCCCGCGTGACCGCGTaGACAGCGCAGCCGGCTCGGCTTTGGAAGGGTTTC +
Preference number: 3 (lower is better)
Translates to: VSLPAAGARVTA*TAQPARLWKGF
Trigger: GAAACCCTTCCAAAGCCGAGCCGGCTGCGCTGTGCACGCGGTCACGCGGGCTCCGGCTGCGGGAAGCGAGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
3UTR GCA 72 bp TGGGCCATCGGTGGCCACGCTCTGATGGACACCTCGTaGCTGCACAGCCGGGCCCACGCTGGAGCGCAGACC +
Preference number: 3 (lower is better)
Translates to: WAIGGHALMDTS*LHSRAHAGAQT
Trigger: GGTCTGCGCTCCAGCGTGGGCCCGGCTGTGCAGGCACGAGGTGTCCATCAGAGCGTGGCCACCGATGGCCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546172.7
3UTR CCA 72 bp TCCTCCCCTGGGCAAGGCCCCACTGCCCTCCACCCGTaGCTCATCCCGGGCTGTCACAGGGACCTCTCGGAC +
Preference number: 3 (lower is better)
Translates to: SSPGQGPTALHP*LIPGCHRDLSD
Trigger: GTCCGAGAGGTCCCTGTGACAGCCCGGGATGAGCCACGGGTGGAGGGCAGTGGGGCCTTGCCCAGGGGAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
3UTR CCA 72 bp CGCGTGACCGCGTGCACAGCGCAGCCGGCTCGGCTTTaGAAGGGTTTCCCGGGCCGGCCTCTGAAGGTGGAG +
Preference number: 3 (lower is better)
Translates to: RVTACTAQPARL*KGFPGRPLKVE
Trigger: CTCCACCTTCAGAGGCCGGCCCGGGAAACCCTTCCAAAGCCGAGCCGGCTGCGCTGTGCACGCGGTCACGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
3UTR-3UTR CAA 90 bp ACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGTCCACACTCGCAACTaGCCCCATTGGTCTGCACTG +
Preference number: 3 (lower is better)
Translates to: TGRRQAPAAAAAALPAVPVHTRN*PHWSAL
Trigger: CAGTGCAGACCAATGGGGCAAGTTGCGAGTGTGGAC...TGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR-3UTR CAA 90 bp GACCGCGTGCACAGCGCAGCCGGCTCGGCTTTGGAAGGGTTTCCCGGGCCGGCCCCAAGCCAGAGCTCTTaGCTGGGGATCCCCCAGTCC +
Preference number: 3 (lower is better)
Translates to: DRVHSAAGSALEGFPGPAPSQSS*LGIPQS
Trigger: GGACTGGGGGATCCCCAGCAAAGAGCTCTGGCTTGG...GGCCGGCCCGGGAAACCCTTCCAAAGCCGAGCCGGCTGCGCTGTGCACGCGGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
3UTR CCA 72 bp CCGGCTGCTGGGTTTGGGAGCCACGGCTCTGGCCTTTaGCAGGGCAGGCTGGGTGCTGCTTGGGCCATCGGT +
Preference number: 3 (lower is better)
Translates to: PAAGFGSHGSGL*QGRLGAAWAIG
Trigger: ACCGATGGCCCAAGCAGCACCCAGCCTGCCCTGCCAAAGGCCAGAGCCGTGGCTCCCAAACCCAGCAGCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546172.7
3UTR GCA 72 bp CAAATCCGGCCACCCCGGGTCCCAGGGAGTCCTGCGTaGCCTTCTGTAAGGCTGAGGGCGCGGGACAGTGTC +
Preference number: 3 (lower is better)
Translates to: QIRPPRVPGSPA*PSVRLRARDSV
Trigger: GACACTGTCCCGCGCCCTCAGCCTTACAGAAGGGCACGCAGGACTCCCTGGGACCCGGGGTGGCCGGATTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR GCA 72 bp TTGCCAAATCCGGCCACCCCGGGTCCCAGGGAGTCCTaGGTGCCCTTCTGTAAGGCTGAGGGCGCGGGACAG +
Preference number: 3 (lower is better)
Translates to: LPNPATPGPRES*VPFCKAEGAGQ
Trigger: CTGTCCCGCGCCCTCAGCCTTACAGAAGGGCACGCAGGACTCCCTGGGACCCGGGGTGGCCGGATTTGGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR CCA 72 bp TTGGTGAGTGTGCCGGCCACGATCATGACGTCGGACTaGCGCGGGCTGGCGCGGAAGACCACGCCAAAGCGG +
Preference number: 3 (lower is better)
Translates to: LVSVPATIMTSD*RGLARKTTPKR
Trigger: CCGCTTTGGCGTGGTCTTCCGCGCCAGCCCGCGCCAGTCCGACGTCATGATCGTGGCCGGCACACTCACCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
3UTR CCA 72 bp CTGCAGGATGCCGTAGAGCAGGGCCTCGGCCGTAGGTaGGCAGCCTGCAGGGACCTTGCCTCAGTCTCGCTT +
Preference number: 3 (lower is better)
Translates to: LQDAVEQGLGRR*AACRDLASVSL
Trigger: AAGCGAGACTGAGGCAAGGTCCCTGCAGGCTGCCCACCTACGGCCGAGGCCCTGCTCTACGGCATCCTGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
3UTR-3UTR CAA 90 bp CGCGTGACCGCGTGCACAGCGCAGCCGGCTCGGCTTTGGAAGGGTTTCCCGGGCCCGAGGGCAGGTTTATaGACAACCTCACGGGACACA +
Preference number: 3 (lower is better)
Translates to: RVTACTAQPARLWKGFPGPRAGL*TTSRDT
Trigger: TGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGG...GCCCGGGAAACCCTTCCAAAGCCGAGCCGGCTGCGCTGTGCACGCGGTCACGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
3UTR-3UTR CAA 90 bp GCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCAGCCTCCGCAGGAACCTTCTCGCTaGGTATTTCTAACTGCAGGT +
Preference number: 3 (lower is better)
Translates to: APAAAAAALPAVPDLQPPQEPSR*VFLTAG
Trigger: ACCTGCAGTTAGAAATACCAAGCGAGAAGGTTCCTG...CGGAGGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR TCA 72 bp CCCAGACTCGGGACTCAGGGCTGGGCTCTCTGCGCATaGGCTAATGCCGCACGCAGCACAGGGTGGCCAAGA +
Preference number: 3 (lower is better)
Translates to: PRLGTQGWALCA*ANAARSTGWPR
Trigger: TCTTGGCCACCCTGTGCTGCGTGCGGCATTAGCTCATGCGCAGAGAGCCCAGCCCTGAGTCCCGAGTCTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR GCA 72 bp CTGTCCCCTGTCCCACATGAGCGCCACCTCCAAGCCTaGCTACCGTGGACCACTGTCAAGGTGAACGCCCGG +
Preference number: 3 (lower is better)
Translates to: LSPVPHERHLQA*LPWTTVKVNAR
Trigger: CCGGGCGTTCACCTTGACAGTGGTCCACGGTAGGCAGGCTTGGAGGTGGCGCTCATGTGGGACAGGGGACAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR GCA 72 bp GCAGGAGTGGAAACAGGTGAGAAAGGACAAGGCCACTaGAGGGCCTGGGAAAGGGCGGCCAGGCCCCACCTG +
Preference number: 3 (lower is better)
Translates to: AGVETGEKGQGH*RAWERAARPHL
Trigger: CAGGTGGGGCCTGGCCGCCCTTTCCCAGGCCCTGCAGTGGCCTTGTCCTTTCTCACCTGTTTCCACTCCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
3UTR GCA 72 bp GGTCATCCAGCTTGGCCACCACATACTCGCCCCGGCTaGTGGGTTTGGGAGCCACGGCTCTGGCCTTTGGCA +
Preference number: 3 (lower is better)
Translates to: GHPAWPPHTRPG*WVWEPRLWPLA
Trigger: TGCCAAAGGCCAGAGCCGTGGCTCCCAAACCCAGCAGCCGGGGCGAGTATGTGGTGGCCAAGCTGGATGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546172.7
3UTR-3UTR CAA 90 bp GCCTCCTCCGTTGGCGCAGCTCCCCATGGAGACCACGTAGCGCGGCTCCGGCATCCGAGGGCAGGTTTATaGACAACCTCACGGGACACA +
Preference number: 3 (lower is better)
Translates to: ASSVGAAPHGDHVARLRHPRAGL*TTSRDT
Trigger: TGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGG...ATGCCGGAGCCGCGCTACGTGGTCTCCATGGGGAGCTGCGCCAACGGAGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
3UTR-3UTR CAA 90 bp AGGAATAGTGGTAGTAGCCTCCTCCGTTGGCGCAGCTCCCCATGGAGACCACGTCAGGCTGGGTGCTGCTaGGGCCATCGGTGGCCACGC +
Preference number: 3 (lower is better)
Translates to: RNSGSSLLRWRSSPWRPRQAGCC*GHRWPR
Trigger: GCGTGGCCACCGATGGCCCAAGCAGCACCCAGCCTG...ACGTGGTCTCCATGGGGAGCTGCGCCAACGGAGGAGGCTACTACCACTATTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546172.7
3UTR-3UTR CAA 90 bp AGGTGGGCAGCCTGGGATGTAGATGTCCACGGGCACGATGCGGTCGCAGCCCCTACGAGGTCATCCAGCTaGGCCACCACATACTCGCCC +
Preference number: 3 (lower is better)
Translates to: RWAAWDVDVHGHDAVAAPTRSSS*ATTYSP
Trigger: GGGCGAGTATGTGGTGGCCAAGCTGGATGACCTCGT...AGGGGCTGCGACCGCATCGTGCCCGTGGACATCTACATCCCAGGCTGCCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546172.7
3UTR TCA 72 bp AGTCCCGGCTGCCACGCAGGTTCAGAACAAAGGGCTTaGGCAAGAGGACGAAGCCCAGGGCCCAACGGGGAC +
Preference number: 3 (lower is better)
Translates to: SPGCHAGSEQRA*ARGRSPGPNGD
Trigger: GTCCCCGTTGGGCCCTGGGCTTCGTCCTCTTGCTCAAGCCCTTTGTTCTGAACCTGCGTGGCAGCCGGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
3UTR GCA 72 bp TGGGCAGAGCTCCTGACCCCAGGATGGACCTCTCTGTaGTGTCAAGTCACAGGGAGGCCCAGGCTGCCCTCT +
Preference number: 3 (lower is better)
Translates to: WAELLTPGWTSL*CQVTGRPRLPS
Trigger: AGAGGGCAGCCTGGGCCTCCCTGTGACTTGACAGCACAGAGAGGTCCATCCTGGGGTCAGGAGCTCTGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR GCA 72 bp GAAGACCACGCCAAAGCGGTCCATGTCGTAGCGGGGTaGTGCCATGTGCATCATCTCCACGGCGCAGCAGGC +
Preference number: 3 (lower is better)
Translates to: EDHAKAVHVVAG*CHVHHLHGAAG
Trigger: GCCTGCTGCGCCGTGGAGATGATGCACATGGCAGCACCCCGCTACGACATGGACCGCTTTGGCGTGGTCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
3UTR-3UTR CAA 90 bp GCGGTCGCAGCCCCTCACCACCGAGTAGGAATAGTGGTAGTAGCCTCCTCCGTTAGCGCTGGGGCCATCTaGTTGGTGAGTGTGCCGGCC +
Preference number: 3 (lower is better)
Translates to: AVAAPHHRVGIVVVASSVSAGAI*LVSVPA
Trigger: GGCCGGCACACTCACCAACAAGATGGCCCCAGCGCT...AACGGAGGAGGCTACTACCACTATTCCTACTCGGTGGTGAGGGGCTGCGACCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
3UTR TCA 72 bp AGGTCATGGGCCACAGAGAACTCCGGCGGGCCCAGTTaGCGAGGTCATCCAGCTTGGCCACCACATACTCGC +
Preference number: 3 (lower is better)
Translates to: RSWATENSGGPS*RGHPAWPPHTR
Trigger: GCGAGTATGTGGTGGCCAAGCTGGATGACCTCGTCAACTGGGCCCGCCGGAGTTCTCTGTGGCCCATGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546172.7
3UTR GCA 72 bp GTGGGCAGCCTGGGATGTAGATGTCCACGGGCACGATaGGGTCGCAGCCCCTCACCACCGAGTAGGAATAGT +
Preference number: 3 (lower is better)
Translates to: VGSLGCRCPRAR*GRSPSPPSRNS
Trigger: ACTATTCCTACTCGGTGGTGAGGGGCTGCGACCGCATCGTGCCCGTGGACATCTACATCCCAGGCTGCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
3UTR-3UTR CAA 90 bp AGGCACCAGGATGTGCCTCTCGCTTGCCCAAACCCCCAGACTCGGGACTCAGGGCCGAGGGCAGGTTTATaGACAACCTCACGGGACACA +
Preference number: 3 (lower is better)
Translates to: RHQDVPLACPNPQTRDSGPRAGL*TTSRDT
Trigger: TGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGG...CCCTGAGTCCCGAGTCTGGGGGTTTGGGCAAGCGAGAGGCACATCCTGGTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR TCA 72 bp CACTGCCCCCGGGGTGACCTGAACCGTGCAGAACGCTaGACAAATCAACGCCCTTTCCAGGGAAGCGGAATC +
Preference number: 3 (lower is better)
Translates to: HCPRGDLNRAER*TNQRPFQGSGI
Trigger: GATTCCGCTTCCCTGGAAAGGGCGTTGATTTGTTCAGCGTTCTGCACGGTTCAGGTCACCCCGGGGGCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR GCA 72 bp GAGCCTGTTCCTCCACTTTTGAGAGGCACCAGGATGTaGCTCTCGCTTGCCCAAACCCCCAGACTCGGGACT +
Preference number: 3 (lower is better)
Translates to: EPVPPLLRGTRM*LSLAQTPRLGT
Trigger: AGTCCCGAGTCTGGGGGTTTGGGCAAGCGAGAGGCACATCCTGGTGCCTCTCAAAAGTGGAGGAACAGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR GCA 72 bp TGCAAGGAGGGAGGAGTACAGTCCACACTCGCAACTTaGCCCATTGGTCTGCACTGCAGGGGAAGACGCCAG +
Preference number: 3 (lower is better)
Translates to: CKEGGVQSTLAT*PIGLHCRGRRQ
Trigger: CTGGCGTCTTCCCCTGCAGTGCAGACCAATGGGGCAAGTTGCGAGTGTGGACTGTACTCCTCCCTCCTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR CCA 72 bp CCCTTCTGTAAGGCTGAGGGCGCGGGACAGTGTCCTTaGCCCCCAGGAACCTTCTCGCTTGGTATTTCTAAC +
Preference number: 3 (lower is better)
Translates to: PFCKAEGAGQCP*PPGTFSLGISN
Trigger: GTTAGAAATACCAAGCGAGAAGGTTCCTGGGGGCCAAGGACACTGTCCCGCGCCCTCAGCCTTACAGAAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR TCA 72 bp ACTGCAGGTCTTTGGTTTGTGCCAGGTAGGACCATATaGAACTGCTGTAAACCAGGCGTGTGTCAGGAATTC +
Preference number: 3 (lower is better)
Translates to: TAGLWFVPGRTI*NCCKPGVCQEF
Trigger: GAATTCCTGACACACGCCTGGTTTACAGCAGTTTCATATGGTCCTACCTGGCACAAACCAAAGACCTGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR GCA 72 bp TCCCACGGGATCACCAGATATAAAGAATGTTCCCGGTaGGATGTGAATTTCAGGTATGCAGCCAATGCTCTT +
Preference number: 3 (lower is better)
Translates to: SHGITRYKECSR*DVNFRYAANAL
Trigger: AAGAGCATTGGCTGCATACCTGAAATTCACATCGCACCGGGAACATTCTTTATATCTGGTGATCCCGTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR TCA 90 bp AAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTCAGCCGGAGCCCGCGTaGCCGCGTGCACAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: KQAGDRTATGSGGGGGGAQPEPA*PRAQRS
Trigger: GCTGCGCTGTGCACGCGGTCACGCGGGCTCCGGCTG...AGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR CCA 90 bp AAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTCCGCCGGGCTCCGTGTaGCGCTGGCCCTGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: KQAGDRTATGSGGGGGGAPPGSV*RWPCLQ
Trigger: CTGGAGACAGGGCCAGCGCCACACGGAGCCCGGCGG...AGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR GCA 90 bp CGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCAGCCTCCGCTCCCCTGGGTGGGCGCAGTaGCAGGGACTGGGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: RRRRRRRYLRYQICSLRSPGWAQ*QGLGAG
Trigger: GCCGGCTCCCAGTCCCTGGCACTGCGCCCACCCAGG...GGAGCGGAGGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR CCA 90 bp GGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCGGAGGGAGGGGAGGTaGCCCAGAGCCCGGGCATCC +
Preference number: 4 (lower is better)
Translates to: GRRQAPAAAAAALPAVPDRREGR*PRARAS
Trigger: GGATGCCCGGGCTCTGGGCCACCTCCCCTCCCTCCG...ATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR CCA 90 bp GGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCGGCCCGGGGCTGCCCTaGACGGAGATGGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GDRLRRRRRRRYLRYQICGPGLP*TEMEAG
Trigger: CCCTGCCTCCATCTCCGTCCAGGGCAGCCCCGGGCC...GCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR GCA 90 bp AAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTTGGACACCTCGTGCCTaGACAGCCGGGCCCACGCTG +
Preference number: 4 (lower is better)
Translates to: KQAGDRTATGSGGGGGGAWTPRA*TAGPTL
Trigger: CAGCGTGGGCCCGGCTGTGCAGGCACGAGGTGTCCA...AGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
CDS-3UTR CCA 90 bp GACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGCGGACTGGCGCGGGCTaGCGCGGAAGACCACGCCAA +
Preference number: 4 (lower is better)
Translates to: DTSRLGTGRRQAPAAAAARTGAG*RGRPRQ
Trigger: TTGGCGTGGTCTTCCGCGCCAGCCCGCGCCAGTCCG...CGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp GGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCAGCCTCCGCTCCCCGGACTGGCGCGGGCTaGCGCGGAAGACCACGCCAA +
Preference number: 4 (lower is better)
Translates to: GGGGGGATCGTRSAASAPRTGAG*RGRPRQ
Trigger: TTGGCGTGGTCTTCCGCGCCAGCCCGCGCCAGTCCG...GGGAGCGGAGGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
CDS-3UTR CCA 90 bp CACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGGCCTCGGCCGTAGGTaGGCAGCCTGCAGGGACCTT +
Preference number: 4 (lower is better)
Translates to: HKQAGDRTATGSGGGGGGGLGRR*AACRDL
Trigger: AAGGTCCCTGCAGGCTGCCCACCTACGGCCGAGGCC...GCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR GCA 90 bp GCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCAGCCTCCGTGGACACCTCGTGCCTaGACAGCCGGGCCCACGCTG +
Preference number: 4 (lower is better)
Translates to: APAAAAAALPAVPDLQPPWTPRA*TAGPTL
Trigger: CAGCGTGGGCCCGGCTGTGCAGGCACGAGGTGTCCA...CGGAGGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
CDS-3UTR GCA 90 bp GACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCAGGGCAGGCTGGGTaGTGCTTGGGCCATCGGTGG +
Preference number: 4 (lower is better)
Translates to: DTSRLGTGRRQAPAAAAAAGQAG*CLGHRW
Trigger: CCACCGATGGCCCAAGCAGCACCCAGCCTGCCCTGC...CGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR GCA 90 bp CGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCAGCCTCCGCTCCGGCGGCGGCGCTACCTaGGGTACCAGATCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: RRRRRRRYLRYQICSLRSGGGAT*GTRSAA
Trigger: GGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGCC...GGAGCGGAGGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
CDS-3UTR CCA 90 bp CACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCTGGGAGCCACGGCTCTaGCCTTTGGCAGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: HKQAGDRTATGSGGGGGGWEPRL*PLAGQA
Trigger: AGCCTGCCCTGCCAAAGGCCAGAGCCGTGGCTCCCA...GCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp AAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTTGGCGCAGCTCCCCATaGAGACCACGTAGCGCGGCT +
Preference number: 4 (lower is better)
Translates to: KQAGDRTATGSGGGGGGAWRSSP*RPRSAA
Trigger: AGCCGCGCTACGTGGTCTCCATGGGGAGCTGCGCCA...AGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
3UTR CAA 72 bp AGGGCCTCGGCCGTAGGTGGGCAGCCTGCAGGGACCTaGCCTCAGTCTCGCTTCCCGCAGCCGGAGCCCGCG +
Preference number: 4 (lower is better)
Translates to: RASAVGGQPAGT*PQSRFPQPEPA
Trigger: CGCGGGCTCCGGCTGCGGGAAGCGAGACTGAGGCAAGGTCCCTGCAGGCTGCCCACCTACGGCCGAGGCCCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR TCA 90 bp GGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCCCTCGTGGGACCACGTaGGGTGCAAGAGTCCCACGG +
Preference number: 4 (lower is better)
Translates to: GDRLRRRRRRRYLRYQICPRGTT*GARVPR
Trigger: CCGTGGGACTCTTGCACCTCACGTGGTCCCACGAGG...GCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR TCA 90 bp GGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCGCCCCCGGGGTGACCTaGACCGTGCAGAACGCTGAA +
Preference number: 4 (lower is better)
Translates to: GDRLRRRRRRRYLRYQICAPGVT*TVQNAE
Trigger: TTCAGCGTTCTGCACGGTTCAGGTCACCCCGGGGGC...GCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR TCA 90 bp GCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCAGCCTCCGTCTGAAGGTGGAGGCTaGCAGCCCTGGGTGGGCGCA +
Preference number: 4 (lower is better)
Translates to: APAAAAAALPAVPDLQPPSEGGG*QPWVGA
Trigger: TGCGCCCACCCAGGGCTGTCAGCCTCCACCTTCAGA...CGGAGGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR GCA 90 bp CGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCAGCCTCCGCTCCCTGATGGACACCTCGTaGCTGCACAGCCGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: RRRRRRRYLRYQICSLRSLMDTS*LHSRAH
Trigger: GTGGGCCCGGCTGTGCAGGCACGAGGTGTCCATCAG...GGAGCGGAGGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
CDS-3UTR GCA 90 bp GACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGCATACTCGCCCCGGCTaGTGGGTTTGGGAGCCACGG +
Preference number: 4 (lower is better)
Translates to: DTSRLGTGRRQAPAAAAAHTRPG*WVWEPR
Trigger: CCGTGGCTCCCAAACCCAGCAGCCGGGGCGAGTATG...CGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR GCA 90 bp ACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGGCGGCGGCGCTACCTaGGGTACCAGATCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: TATGSGGGGGGATCGTRSGGGAT*GTRSAA
Trigger: GGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGCC...AGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
CDS-3UTR GCA 90 bp CCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGGGTGTGGGCTCCCTCGTGGGCGGTaGGGTCCCGGCCCTACCTGG +
Preference number: 4 (lower is better)
Translates to: PSRPIHRMGEPAVCWGCGLPRGR*GPGPTW
Trigger: CCAGGTAGGGCCGGGACCGCACCGCCCACGAGGGAG...CCCACACCCCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CCA 90 bp ACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGTGGGAGCCACGGCTCTaGCCTTTGGCAGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: TQAGWGQDGDRLRRRRRRWEPRL*PLAGQA
Trigger: AGCCTGCCCTGCCAAAGGCCAGAGCCGTGGCTCCCA...CCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp GACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGTGGGAGCCACGGCTCTaGCCTTTGGCAGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: DTSRLGTGRRQAPAAAAAWEPRL*PLAGQA
Trigger: AGCCTGCCCTGCCAAAGGCCAGAGCCGTGGCTCCCA...CGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp GCCGGAGCCCGCGTGACCGCGTGCACAGCGCAGCCGGCTCGGCTTTGGAAGGGTCGGACTGGCGCGGGCTaGCGCGGAAGACCACGCCAA +
Preference number: 4 (lower is better)
Translates to: AGARVTACTAQPARLWKGRTGAG*RGRPRQ
Trigger: TTGGCGTGGTCTTCCGCGCCAGCCCGCGCCAGTCCG...ACCCTTCCAAAGCCGAGCCGGCTGCGCTGTGCACGCGGTCACGCGGGCTCCGGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR CCA 90 bp GGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACGGCCTCGGCCGTAGGTaGGCAGCCTGGGATGTAGAT +
Preference number: 4 (lower is better)
Translates to: GQDGDRLRRRRRRRYLRYGLGRR*AAWDVD
Trigger: ATCTACATCCCAGGCTGCCCACCTACGGCCGAGGCC...GTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGTCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR CCA 90 bp AAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTGGCCTCGGCCGTAGGTaGGCAGCCTGGGATGTAGAT +
Preference number: 4 (lower is better)
Translates to: KQAGDRTATGSGGGGGGAGLGRR*AAWDVD
Trigger: ATCTACATCCCAGGCTGCCCACCTACGGCCGAGGCC...AGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR CCA 90 bp ACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGGGACACAAGCAGGCTaGGGACAGGACGGCGACAGG +
Preference number: 4 (lower is better)
Translates to: TGRRQAPAAAAAALPAVPGTQAG*GQDGDR
Trigger: CCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCC...TGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
CDS-3UTR CCA 90 bp GACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGGGACACAAGCAGGCTaGGGACAGGACGGCGACAGG +
Preference number: 4 (lower is better)
Translates to: DTSRLGTGRRQAPAAAAAGTQAG*GQDGDR
Trigger: CCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCC...CGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp CCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGGGTGTGGGCCGCCGGGCTCCGTGTaGCGCTGGCCCTGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: PSRPIHRMGEPAVCWGCGPPGSV*RWPCLQ
Trigger: CTGGAGACAGGGCCAGCGCCACACGGAGCCCGGCGG...CCCACACCCCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CCA 90 bp GACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCCAGAGCTCTTTGCTaGGGATCCCCCAGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: DTSRLGTGRRQAPAAAAAARALC*GSPSPG
Trigger: GCCGGGACTGGGGGATCCCCAGCAAAGAGCTCTGGC...CGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR TCA 90 bp GCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCATCGGTGGCCACGCTCTaGTGGACACCTCGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: ATGSGGGGGGATCGTRSASVATL*WTPRAC
Trigger: GCAGGCACGAGGTGTCCATCAGAGCGTGGCCACCGA...TGCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGC
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
CDS-3UTR GCA 90 bp CGCAGCCGGAGCCCGCGTGACCGCGTGCACAGCGCAGCCGGCTCGGCTTTGGAAGCAGGGCAGGCTGGGTaGTGCTTGGGCCATCGGTGG +
Preference number: 4 (lower is better)
Translates to: RSRSPRDRVHSAAGSALEAGQAG*CLGHRW
Trigger: CCACCGATGGCCCAAGCAGCACCCAGCCTGCCCTGC...TTCCAAAGCCGAGCCGGCTGCGCTGTGCACGCGGTCACGCGGGCTCCGGCTGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR GCA 90 bp CGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCAGCCTCCGCTCCCGGGGTGCTGCCATGTaGATCATCTCCACGGCGCAG +
Preference number: 4 (lower is better)
Translates to: RRRRRRRYLRYQICSLRSRGAAM*IISTAQ
Trigger: CTGCGCCGTGGAGATGATGCACATGGCAGCACCCCG...GGAGCGGAGGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
CDS-3UTR GCA 90 bp ACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGTCTGCAGCTGCAGGATaGCGTAGAGCAGGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: TQAGWGQDGDRLRRRRRRSAAAG*RRAGPR
Trigger: CCGAGGCCCTGCTCTACGGCATCCTGCAGCTGCAGA...CCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR GCA 90 bp GGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCGGTACCAGATCTaGAGCCTCCGCTCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: GRRQAPAAAAAALPAVPDLRYQI*SLRSRL
Trigger: CAAGCGGGAGCGGAGGCTGCAGATCTGGTACCGCAG...ATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
CDS-3UTR GCA 90 bp CTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTaGGGTACCAGATCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LTGHKQAGDRTATGSGGGGGGAT*GTRSAA
Trigger: GGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGCC...GCCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR GCA 90 bp CGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGGGTGTGGGAGGGGAGCCCGCCGTCTaGTGGGGGTGTGGGACTCCC +
Preference number: 4 (lower is better)
Translates to: RVGPSIGWGSPPSAGGVGGEPAV*WGCGTP
Trigger: GGGAGTCCCACACCCCCAGCAGACGGCGGGCTCCCC...TCCCACACCCCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR GCA 90 bp CTCCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGGGTGTGGGGGAGCCCGCCGTCTaGTGGGGGTGTGGGACTCCC +
Preference number: 4 (lower is better)
Translates to: LRVGPSIGWGSPPSAGGVGEPAV*WGCGTP
Trigger: GGGAGTCCCACACCCCCAGCAGACGGCGGGCTCCCC...CACACCCCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR GCA 90 bp GGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCCGCCACCTCCAAGCCTaGCTACCGTGGACCACTGTC +
Preference number: 4 (lower is better)
Translates to: GDRLRRRRRRRYLRYQICRHLQA*LPWTTV
Trigger: GACAGTGGTCCACGGTAGGCAGGCTTGGAGGTGGCG...GCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCC
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR CCA 90 bp CTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCACTCGCCCCGGCTGCTaGGTTTGGGAGCCACGGCTC +
Preference number: 4 (lower is better)
Translates to: LTGHKQAGDRTATGSGGGTRPGC*VWEPRL
Trigger: GAGCCGTGGCTCCCAAACCCAGCAGCCGGGGCGAGT...GCCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp GCCGGAGCCCGCGTGACCGCGTGCACAGCGCAGCCGGCTCGGCTTTGGAAGGGTACTCGCCCCGGCTGCTaGGTTTGGGAGCCACGGCTC +
Preference number: 4 (lower is better)
Translates to: AGARVTACTAQPARLWKGTRPGC*VWEPRL
Trigger: GAGCCGTGGCTCCCAAACCCAGCAGCCGGGGCGAGT...ACCCTTCCAAAGCCGAGCCGGCTGCGCTGTGCACGCGGTCACGCGGGCTCCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR CCA 90 bp CCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGACTCGCCCCGGCTGCTaGGTTTGGGAGCCACGGCTC +
Preference number: 4 (lower is better)
Translates to: PHGTQAGWGQDGDRLRRRTRPGC*VWEPRL
Trigger: GAGCCGTGGCTCCCAAACCCAGCAGCCGGGGCGAGT...CCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp GGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACAGTAGCCTCCTCCGTTaGCGCAGCTCCCCATGGAGA +
Preference number: 4 (lower is better)
Translates to: GQDGDRLRRRRRRRYLRYSSLLR*RSSPWR
Trigger: TCTCCATGGGGAGCTGCGCCAACGGAGGAGGCTACT...GTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
CDS-3UTR CCA 90 bp ACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCGTAGGTGGGCAGCCTaGGATGTAGATGTCCACGGG +
Preference number: 4 (lower is better)
Translates to: TSRLGTGRRQAPAAAAAARRWAA*DVDVHG
Trigger: CCCGTGGACATCTACATCCCAGGCTGCCCACCTACG...CGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233627.14
ENST00000534853.5
ENST00000546172.7
CDS-3UTR CCA 90 bp CGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGGGTGTGGGACCGCCGGGCTCCGTGTaGCGCTGGCCCTGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: RVGPSIGWGSPPSAGGVGPPGSV*RWPCLQ
Trigger: CTGGAGACAGGGCCAGCGCCACACGGAGCCCGGCGG...TCCCACACCCCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CCA 90 bp ACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGCGGGACAGTGTCCTTaGCCCCCAGGAACCTTCTCG +
Preference number: 4 (lower is better)
Translates to: TGRRQAPAAAAAALPAVPAGQCP*PPGTFS
Trigger: CGAGAAGGTTCCTGGGGGCCAAGGACACTGTCCCGC...TGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR CCA 90 bp ACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGCCCTCAGGACTCAATaGGGGCCAGCGCTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: TGRRQAPAAAAAALPAVPALRTQ*GPALSR
Trigger: TCTGCTGAGCGCTGGCCCCCATTGAGTCCTGAGGGC...TGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR CCA 90 bp CCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGGCAGGGCCTCGGCCGTaGTGGGCAGCCTGGGATGTA +
Preference number: 4 (lower is better)
Translates to: PHGTQAGWGQDGDRLRRRAGPRP*WAAWDV
Trigger: TACATCCCAGGCTGCCCACCACGGCCGAGGCCCTGC...CCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620479.4
CDS-3UTR TCA 90 bp GACCGCGTGCACAGCGCAGCCGGCTCGGCTTTGGAAGGGTTTCCCGGGCCGGCCTCCGGCGGGCCCAGTTaGCGAGGTCATCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: DRVHSAAGSALEGFPGPASGGPS*RGHPAW
Trigger: CCAAGCTGGATGACCTCGTCAACTGGGCCCGCCGGA...GGCCGGCCCGGGAAACCCTTCCAAAGCCGAGCCGGCTGCGCTGTGCACGCGGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR TCA 90 bp CAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGTGCCGGCCACGATCATaGCGTCGGACTGGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: QPHGTQAGWGQDGDRLRRCRPRS*RRTGAG
Trigger: GCCCGCGCCAGTCCGACGTCATGATCGTGGCCGGCA...CCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR TCA 90 bp GAGGCAGCGCTCCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTTGCCGGCCACGATCATaGCGTCGGACTGGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: EAALRVGPSIGWGSPPSACRPRS*RRTGAG
Trigger: GCCCGCGCCAGTCCGACGTCATGATCGTGGCCGGCA...AGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCGGAGCGCTGCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR TCA 90 bp AACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCTGCCGGCCACGATCATaGCGTCGGACTGGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: NLTGHKQAGDRTATGSGGCRPRS*RRTGAG
Trigger: GCCCGCGCCAGTCCGACGTCATGATCGTGGCCGGCA...GCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR TCA 90 bp CGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCAGTGGGCTCTCTGCGCATaGGCTAATGCCGCACGCAGC +
Preference number: 4 (lower is better)
Translates to: RQAPAAAAAALPAVPDLQWALCA*ANAARS
Trigger: GCTGCGTGCGGCATTAGCTCATGCGCAGAGAGCCCA...CTGCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR GCA 90 bp CCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCTGATGGACACCTCGTaGCTGCACAGCCGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: PHGTQAGWGQDGDRLRRRLMDTS*LHSRAH
Trigger: GTGGGCCCGGCTGTGCAGGCACGAGGTGTCCATCAG...CCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR GCA 90 bp GCCGGGCCCACGCTGGAGCGCAGACCAAGGATCCGGAAGCCGCGCAGGCCAGGACTGATGGACACCTCGTaGCTGCACAGCCGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: AGPTLERRPRIRKPRRPGLMDTS*LHSRAH
Trigger: GTGGGCCCGGCTGTGCAGGCACGAGGTGTCCATCAG...TCCTGGCCTGCGCGGCTTCCGGATCCTTGGTCTGCGCTCCAGCGTGGGCCCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546172.7
CDS-3UTR GCA 90 bp CCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCATACTCGCCCCGGCTaGTGGGTTTGGGAGCCACGG +
Preference number: 4 (lower is better)
Translates to: PHGTQAGWGQDGDRLRRRHTRPG*WVWEPR
Trigger: CCGTGGCTCCCAAACCCAGCAGCCGGGGCGAGTATG...CCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR GCA 90 bp CCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGTGTCCACGGGCACGATaGGGTCGCAGCCCCTCACCA +
Preference number: 4 (lower is better)
Translates to: PHGTQAGWGQDGDRLRRRCPRAR*GRSPSP
Trigger: TGGTGAGGGGCTGCGACCGCATCGTGCCCGTGGACA...CCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR GCA 90 bp CACAGGGACCTCTCGGACAAGACGCTGACCTCACTAACCCGGCCCCCGGCCCCAGGGGAGCCCGCCGTCTaGTGGGGGTGTGGGACTCCC +
Preference number: 4 (lower is better)
Translates to: HRDLSDKTLTSLTRPPAPGEPAV*WGCGTP
Trigger: GGGAGTCCCACACCCCCAGCAGACGGCGGGCTCCCC...TGGGGCCGGGGGCCGGGTTAGTGAGGTCAGCGTCTTGTCCGAGAGGTCCCTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR GCA 90 bp GGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATGATGTGCCTCTCGCTTaGCCAAACCCCCAGACTCGG +
Preference number: 4 (lower is better)
Translates to: GRRQAPAAAAAALPAVPDDVPLA*PNPQTR
Trigger: CCGAGTCTGGGGGTTTGGGCAAGCGAGAGGCACATC...ATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR GCA 90 bp GCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCAGCCTCCGCTGGCAAGTCCAGGCTaGTCCAAGGGAGGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: APAAAAAALPAVPDLQPPLASPG*SKGGRS
Trigger: GCTTCTCCCTCCCTTGGAGCAGCCTGGACTTGCCAG...CGGAGGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR GCA 90 bp ACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGAAAGGACAAGGCCACTaGAGGGCCTGGGAAAGGGCG +
Preference number: 4 (lower is better)
Translates to: TQAGWGQDGDRLRRRRRRKGQGH*RAWERA
Trigger: CGCCCTTTCCCAGGCCCTGCAGTGGCCTTGTCCTTT...CCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR GCA 90 bp CTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCTGGGCAAGGCCCCACTaGCCTCCACCCGTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: LTGHKQAGDRTATGSGGGWARPH*PPPVAH
Trigger: ATGAGCCACGGGTGGAGGGCAGTGGGGCCTTGCCCA...GCCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR GCA 90 bp GCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCACGTAGGTGGGCAGCCTaGAGGGACCTTGCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: ATGSGGGGGGATCGTRSARRWAA*RDLASV
Trigger: GACTGAGGCAAGGTCCCTGCAGGCTGCCCACCTACG...TGCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR GCA 90 bp GCAGCGCTCCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGGCCGGGAGGTTCCGCTaGGCTTTCGGCCTCCGTGGT +
Preference number: 4 (lower is better)
Translates to: AALRVGPSIGWGSPPSAGAGRFR*AFGLRG
Trigger: ACCACGGAGGCCGAAAGCGCAGCGGAACCTCCCGGC...CCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCGGAGCGCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546283.5
CDS-3UTR CCA 90 bp GGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCAGCCTCCGCTCCCGCTTTTGGCAGGGCAGGCTaGGTGCTGCTTGGGCCATCG +
Preference number: 4 (lower is better)
Translates to: GGGGGATCGTRSAASAPAFGRAG*VLLGPS
Trigger: CGATGGCCCAAGCAGCACCCAGCCTGCCCTGCCAAA...AGCGGGAGCGGAGGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
CDS-3UTR CCA 90 bp CTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCCACGGCTCTGGCCTTTaGCAGGGCAGGCTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: LTGHKQAGDRTATGSGGGHGSGL*QGRLGA
Trigger: AGCACCCAGCCTGCCCTGCCAAAGGCCAGAGCCGTG...GCCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp ACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGACTCGCCCCGGCTGCTaGGTTTGGGAGCCACGGCTC +
Preference number: 4 (lower is better)
Translates to: TSRDTSRLGTGRRQAPAATRPGC*VWEPRL
Trigger: GAGCCGTGGCTCCCAAACCCAGCAGCCGGGGCGAGT...CGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp AACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCCGGACTGGCGCGGGCTaGCGCGGAAGACCACGCCAA +
Preference number: 4 (lower is better)
Translates to: NLTGHKQAGDRTATGSGGRTGAG*RGRPRQ
Trigger: TTGGCGTGGTCTTCCGCGCCAGCCCGCGCCAGTCCG...GCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp GTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGGGTGTGGGACTCCGGACTGGCGCGGGCTaGCGCGGAAGACCACGCCAA +
Preference number: 4 (lower is better)
Translates to: VGPSIGWGSPPSAGGVGLRTGAG*RGRPRQ
Trigger: TTGGCGTGGTCTTCCGCGCCAGCCCGCGCCAGTCCG...GAGTCCCACACCCCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CCA 90 bp CCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGATCATGACGTCGGACTaGCGCGGGCTGGCGCGGAAG +
Preference number: 4 (lower is better)
Translates to: PHGTQAGWGQDGDRLRRRIMTSD*RGLARK
Trigger: CTTCCGCGCCAGCCCGCGCCAGTCCGACGTCATGAT...CCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp CGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCAGCCTCCGCTCCAGTAGCCTCCTCCGTTaGCGCAGCTCCCCATGGAGA +
Preference number: 4 (lower is better)
Translates to: RRRRRRRYLRYQICSLRSSSLLR*RSSPWR
Trigger: TCTCCATGGGGAGCTGCGCCAACGGAGGAGGCTACT...GGAGCGGAGGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
CDS-3UTR CCA 90 bp GGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCAGCCTCCGCTCCCAGTAGCCTCCTCCGTTaGCGCAGCTCCCCATGGAGA +
Preference number: 4 (lower is better)
Translates to: GGGGGGATCGTRSAASAPSSLLR*RSSPWR
Trigger: TCTCCATGGGGAGCTGCGCCAACGGAGGAGGCTACT...GGGAGCGGAGGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
CDS-3UTR CCA 90 bp GGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACACAGCACCGCCATCTTaGCCTCGGCCTTCAGACAAC +
Preference number: 4 (lower is better)
Translates to: GQDGDRLRRRRRRRYLRYTAPPS*PRPSDN
Trigger: GTTGTCTGAAGGCCGAGGCCAAGATGGCGGTGCTGT...GTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGTCC
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR CCA 90 bp GTGCACAGCGCAGCCGGCTCGGCTTTGGAAGGGTTTCCCGGGCCGGCCTCTGAATCTCCAGCTCCCTCGTaGGCGGTGCGGTCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: VHSAAGSALEGFPGPASESPAPS*AVRSRP
Trigger: GGGCCGGGACCGCACCGCCCACGAGGGAGCTGGAGA...TTCAGAGGCCGGCCCGGGAAACCCTTCCAAAGCCGAGCCGGCTGCGCTGTGCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR CCA 90 bp GCAGCGCTCCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGGGCTCCGTGTGGCGCTaGCCCTGTCTCCAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: AALRVGPSIGWGSPPSAGGSVWR*PCLQLP
Trigger: AGGGAGCTGGAGACAGGGCCAGCGCCACACGGAGCC...CCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCGGAGCGCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CCA 90 bp CCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGGGTGTGGGGGCTCCGTGTGGCGCTaGCCCTGTCTCCAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: PSRPIHRMGEPAVCWGCGGSVWR*PCLQLP
Trigger: AGGGAGCTGGAGACAGGGCCAGCGCCACACGGAGCC...CCCACACCCCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CCA 90 bp GACCGCGTGCACAGCGCAGCCGGCTCGGCTTTGGAAGGGTTTCCCGGGCCGGCCGGCCCATCCATAGGATaGGGGAGCCCGCCGTCTGCT +
Preference number: 4 (lower is better)
Translates to: DRVHSAAGSALEGFPGPAGPSIG*GSPPSA
Trigger: AGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCC...GGCCGGCCCGGGAAACCCTTCCAAAGCCGAGCCGGCTGCGCTGTGCACGCGGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR CCA 90 bp ACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGCAGCCGGCTCGGCTTTaGAAGGGTTTCCCGGGCCGG +
Preference number: 4 (lower is better)
Translates to: TSRDTSRLGTGRRQAPAAQPARL*KGFPGR
Trigger: CCGGCCCGGGAAACCCTTCCAAAGCCGAGCCGGCTG...CGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
3UTR CAA 72 bp CCGCGTGACCGCGTGCACAGCGCAGCCGGCTCGGCTTaGGAAGGGTTTCCCGGGCCGGCCTCTGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: PRDRVHSAAGSA*EGFPGPASEGG
Trigger: TCCACCTTCAGAGGCCGGCCCGGGAAACCCTTCCAAAGCCGAGCCGGCTGCGCTGTGCACGCGGTCACGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR TCA 90 bp GCAGCGCTCCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGTCGGTGGCCACGCTCTaGTGGACACCTCGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: AALRVGPSIGWGSPPSAGSVATL*WTPRAC
Trigger: GCAGGCACGAGGTGTCCATCAGAGCGTGGCCACCGA...CCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCGGAGCGCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR TCA 90 bp CACAGGGACCTCTCGGACAAGACGCTGACCTCACTAACCCGGCCCCCGGCCCCATGCCGGCCACGATCATaGCGTCGGACTGGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: HRDLSDKTLTSLTRPPAPCRPRS*RRTGAG
Trigger: GCCCGCGCCAGTCCGACGTCATGATCGTGGCCGGCA...TGGGGCCGGGGGCCGGGTTAGTGAGGTCAGCGTCTTGTCCGAGAGGTCCCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR TCA 90 bp CAGGGCCTCGGCCGTAGGTGGGCAGCCTGCAGGGACCTTGCCTCAGTCTCGCTTTGCCGGCCACGATCATaGCGTCGGACTGGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: QGLGRRWAACRDLASVSLCRPRS*RRTGAG
Trigger: GCCCGCGCCAGTCCGACGTCATGATCGTGGCCGGCA...AAGCGAGACTGAGGCAAGGTCCCTGCAGGCTGCCCACCTACGGCCGAGGCCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR TCA 90 bp AGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGGGTGTGGGACTTGCCGGCCACGATCATaGCGTCGGACTGGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: SRPIHRMGEPAVCWGCGTCRPRS*RRTGAG
Trigger: GCCCGCGCCAGTCCGACGTCATGATCGTGGCCGGCA...AGTCCCACACCCCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR GCA 90 bp CTCCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGGGTGTGTGGACACCTCGTGCCTaGACAGCCGGGCCCACGCTG +
Preference number: 4 (lower is better)
Translates to: LRVGPSIGWGSPPSAGGVWTPRA*TAGPTL
Trigger: CAGCGTGGGCCCGGCTGTGCAGGCACGAGGTGTCCA...CACACCCCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR GCA 90 bp GCGCTCCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGGGTCTGATGGACACCTCGTaGCTGCACAGCCGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: ALRVGPSIGWGSPPSAGGLMDTS*LHSRAH
Trigger: GTGGGCCCGGCTGTGCAGGCACGAGGTGTCCATCAG...ACCCCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCGGAGCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR GCA 90 bp CGCGTGACCGCGTGCACAGCGCAGCCGGCTCGGCTTTGGAAGGGTTTCCCGGGCCTGATGGACACCTCGTaGCTGCACAGCCGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: RVTACTAQPARLWKGFPGLMDTS*LHSRAH
Trigger: GTGGGCCCGGCTGTGCAGGCACGAGGTGTCCATCAG...GCCCGGGAAACCCTTCCAAAGCCGAGCCGGCTGCGCTGTGCACGCGGTCACGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR GCA 90 bp CCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGTCTGCAGCTGCAGGATaGCGTAGAGCAGGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: PHGTQAGWGQDGDRLRRRSAAAG*RRAGPR
Trigger: CCGAGGCCCTGCTCTACGGCATCCTGCAGCTGCAGA...CCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR GCA 90 bp CGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCAGCCTCCGCTCCCGCTTGCTGCGGTACCAGATCTaGAGCCTCCGCTCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: RRRRRYLRYQICSLRSRLLRYQI*SLRSRL
Trigger: CAAGCGGGAGCGGAGGCTGCAGATCTGGTACCGCAG...CAAGCGGGAGCGGAGGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
CDS-3UTR GCA 90 bp GACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCAGCAGGGCCCGGGGCTaGCCTGGACGGAGATGGAGG +
Preference number: 4 (lower is better)
Translates to: DNLTGHKQAGDRTATGSGSRARG*PGRRWR
Trigger: CCTCCATCTCCGTCCAGGGCAGCCCCGGGCCCTGCT...GCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR GCA 90 bp CCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGAGCCTGCAGGGACCTTaGCTCAGTCTCGCTTCCCGC +
Preference number: 4 (lower is better)
Translates to: PHGTQAGWGQDGDRLRRRSLQGP*LSLASR
Trigger: GCGGGAAGCGAGACTGAGGCAAGGTCCCTGCAGGCT...CCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR GCA 90 bp GCGCTCCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGGGTGGTCGTGTTGCGCCGTaGACCCCCAGATCACCCGAG +
Preference number: 4 (lower is better)
Translates to: ALRVGPSIGWGSPPSAGGGRVAP*TPRSPE
Trigger: CTCGGGTGATCTGGGGGTGCACGGCGCAACACGACC...ACCCCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCGGAGCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000546283.5
CDS-3UTR CCA 90 bp GACCGCGTGCACAGCGCAGCCGGCTCGGCTTTGGAAGGGTTTCCCGGGCCGGCCTTTGGCAGGGCAGGCTaGGTGCTGCTTGGGCCATCG +
Preference number: 4 (lower is better)
Translates to: DRVHSAAGSALEGFPGPAFGRAG*VLLGPS
Trigger: CGATGGCCCAAGCAGCACCCAGCCTGCCCTGCCAAA...GGCCGGCCCGGGAAACCCTTCCAAAGCCGAGCCGGCTGCGCTGTGCACGCGGTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR CCA 90 bp CCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGGGTGTGGGTGGGAGCCACGGCTCTaGCCTTTGGCAGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PSRPIHRMGEPAVCWGCGWEPRL*PLAGQA
Trigger: AGCCTGCCCTGCCAAAGGCCAGAGCCGTGGCTCCCA...CCCACACCCCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CCA 90 bp GTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGGGTGTGGGACTCACTCGCCCCGGCTGCTaGGTTTGGGAGCCACGGCTC +
Preference number: 4 (lower is better)
Translates to: VGPSIGWGSPPSAGGVGLTRPGC*VWEPRL
Trigger: GAGCCGTGGCTCCCAAACCCAGCAGCCGGGGCGAGT...GAGTCCCACACCCCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CCA 90 bp GACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGACCTTGCGAAGCGCTaGGGCCATCTTGTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: DTSRLGTGRRQAPAAAAADLAKR*GHLVGE
Trigger: CTCACCAACAAGATGGCCCCAGCGCTTCGCAAGGTC...CGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
CDS-3UTR CCA 90 bp CCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGGGTGTGGGTGGCGCAGCTCCCCATaGAGACCACGTAGCGCGGCT +
Preference number: 4 (lower is better)
Translates to: PSRPIHRMGEPAVCWGCGWRSSP*RPRSAA
Trigger: AGCCGCGCTACGTGGTCTCCATGGGGAGCTGCGCCA...CCCACACCCCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CCA 90 bp GCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCATCCATAGGATGGGGGAGCCCTCTCCAGCTCCCTCGTaGGCGGTGCGGTCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: APLRGSAPSRPIHRMGEPSPAPS*AVRSRP
Trigger: GGGCCGGGACCGCACCGCCCACGAGGGAGCTGGAGA...GGGCTCCCCCATCCTATGGATGGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CCA 90 bp CCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGGGTGTGGGGGCCCATCCATAGGATaGGGGAGCCCGCCGTCTGCT +
Preference number: 4 (lower is better)
Translates to: PSRPIHRMGEPAVCWGCGGPSIG*GSPPSA
Trigger: AGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCC...CCCACACCCCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CCA 90 bp GCCGACTTCTCACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCGGCCCGGGGCTGCCCTaGACGGAGATGGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ADFSQGTGSTKRQRSESAGPGLP*TEMEAG
Trigger: CCCTGCCTCCATCTCCGTCCAGGGCAGCCCCGGGCC...GGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTGAGAAGTCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR TCA 90 bp CAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGTCCGGCGGGCCCAGTTaGCGAGGTCATCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: QPHGTQAGWGQDGDRLRRSGGPS*RGHPAW
Trigger: CCAAGCTGGATGACCTCGTCAACTGGGCCCGCCGGA...CCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR TCA 90 bp CTGCCATGTGCATCATCTCCACGGCGCAGCAGGCCAGGCCGAAGGTCATGGGCCTGCCGGCCACGATCATaGCGTCGGACTGGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: LPCASSPRRSRPGRRSWACRPRS*RRTGAG
Trigger: GCCCGCGCCAGTCCGACGTCATGATCGTGGCCGGCA...GGCCCATGACCTTCGGCCTGGCCTGCTGCGCCGTGGAGATGATGCACATGGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR TCA 90 bp CTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCGGGCCATCTTGTTGGTaGGTGTGCCGGCCACGATCA +
Preference number: 4 (lower is better)
Translates to: LTGHKQAGDRTATGSGGGGPSCW*VCRPRS
Trigger: TGATCGTGGCCGGCACACTCACCAACAAGATGGCCC...GCCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR TCA 90 bp ACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCGAGGGCAGGTTTATTaGCAACCTCACGGGACACAA +
Preference number: 4 (lower is better)
Translates to: TSRLGTGRRQAPAAAAAARGQVY*QPHGTQ
Trigger: TTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCG...CGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR TCA 90 bp AAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTAGGAGTGGAAACAGGTaGGAAAGGACAAGGCCACTG +
Preference number: 4 (lower is better)
Translates to: KQAGDRTATGSGGGGGGARSGNR*ERTRPL
Trigger: CAGTGGCCTTGTCCTTTCTCACCTGTTTCCACTCCT...AGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR TCA 90 bp AGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCATCCATAGGATGCAGCCGGAGCCCGCGTaGCCGCGTGCACAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: RGQAPLRGSAPSRPIHRMQPEPA*PRAQRS
Trigger: GCTGCGCTGTGCACGCGGTCACGCGGGCTCCGGCTG...CATCCTATGGATGGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR GCA 90 bp CGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGGGTGTGGGACATACTCGCCCCGGCTaGTGGGTTTGGGAGCCACGG +
Preference number: 4 (lower is better)
Translates to: RVGPSIGWGSPPSAGGVGHTRPG*WVWEPR
Trigger: CCGTGGCTCCCAAACCCAGCAGCCGGGGCGAGTATG...TCCCACACCCCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR GCA 90 bp GACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGCATGTCGTAGCGGGGTaGTGCCATGTGCATCATCTC +
Preference number: 4 (lower is better)
Translates to: DTSRLGTGRRQAPAAAAAHVVAG*CHVHHL
Trigger: GAGATGATGCACATGGCAGCACCCCGCTACGACATG...CGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR GCA 90 bp AGCGGGGTGCTGCCATGTGCATCATCTCCACGGCGCAGCAGGCCAGGCCGAAGGGGCGGCGGCGCTACCTaGGGTACCAGATCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SGVLPCASSPRRSRPGRRGGGAT*GTRSAA
Trigger: GGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGCC...CCTTCGGCCTGGCCTGCTGCGCCGTGGAGATGATGCACATGGCAGCACCCCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR GCA 90 bp CACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCATCCATAGGCTCCCTCGTGGGCGGTaGGGTCCCGGCCCTACCTGG +
Preference number: 4 (lower is better)
Translates to: HRGQAPLRGSAPSRPIHRLPRGR*GPGPTW
Trigger: CCAGGTAGGGCCGGGACCGCACCGCCCACGAGGGAG...CCTATGGATGGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR GCA 90 bp CTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCGGTCCCAGGGAGTCCTaGGTGCCCTTCTGTAAGGCT +
Preference number: 4 (lower is better)
Translates to: LTGHKQAGDRTATGSGGGGPRES*VPFCKA
Trigger: AGCCTTACAGAAGGGCACGCAGGACTCCCTGGGACC...GCCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR GCA 90 bp CGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCAGCCTCCGCTCCCGCTTGCTGGCAAGTCCAGGCTaGTCCAAGGGAGGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: RRRRRYLRYQICSLRSRLLASPG*SKGGRS
Trigger: GCTTCTCCCTCCCTTGGAGCAGCCTGGACTTGCCAG...CAAGCGGGAGCGGAGGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR GCA 90 bp CGCGTGACCGCGTGCACAGCGCAGCCGGCTCGGCTTTGGAAGGGTTTCCCGGGCAGCCTGCAGGGACCTTaGCTCAGTCTCGCTTCCCGC +
Preference number: 4 (lower is better)
Translates to: RVTACTAQPARLWKGFPGSLQGP*LSLASR
Trigger: GCGGGAAGCGAGACTGAGGCAAGGTCCCTGCAGGCT...GCCCGGGAAACCCTTCCAAAGCCGAGCCGGCTGCGCTGTGCACGCGGTCACGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR GCA 90 bp CTCCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGGGTGTGCGTCAGCCACGCAGGTaGTTCCCAGAGGCGGATGCG +
Preference number: 4 (lower is better)
Translates to: LRVGPSIGWGSPPSAGGVRQPRR*FPEADA
Trigger: CGCATCCGCCTCTGGGAAGCACCTGCGTGGCTGACG...CACACCCCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000414651.3
CDS-3UTR GCA 90 bp CTAAGAGGCAGCGCTCCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCGAAAGGTCATCGGAGTaGGCACGTGGGGGCCGCGGG +
Preference number: 4 (lower is better)
Translates to: LRGSAPSRPIHRMGEPAVERSSE*ARGGRG
Trigger: CCCGCGGCCCCCACGTGCGCACTCCGATGACCTTTC...GACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCGGAGCGCTGCCTCTTAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000546283.5
CDS-3UTR GCA 90 bp CTCCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGGGTGTGGCGGCTCGGAGCGCATaGGGAAACCGGAACCTGGAG +
Preference number: 4 (lower is better)
Translates to: LRVGPSIGWGSPPSAGGVAARSA*GNRNLE
Trigger: CTCCAGGTTCCGGTTTCCGCATGCGCTCCGAGCCGC...CACACCCCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000546283.5
CDS-3UTR CCA 90 bp CGGAGCCCGCGTGACCGCGTGCACAGCGCAGCCGGCTCGGCTTTGGAAGGGTTTAGGCTGGGTGCTGCTTaGGCCATCGGTGGCCACGCT +
Preference number: 4 (lower is better)
Translates to: RSPRDRVHSAAGSALEGFRLGAA*AIGGHA
Trigger: AGCGTGGCCACCGATGGCCCAAGCAGCACCCAGCCT...AAACCCTTCCAAAGCCGAGCCGGCTGCGCTGTGCACGCGGTCACGCGGGCTCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR CCA 90 bp GTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGGGTGTGGGACTCCACGGCTCTGGCCTTTaGCAGGGCAGGCTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: VGPSIGWGSPPSAGGVGLHGSGL*QGRLGA
Trigger: AGCACCCAGCCTGCCCTGCCAAAGGCCAGAGCCGTG...GAGTCCCACACCCCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CCA 90 bp CCGACTTCTCACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCCGGACTGGCGCGGGCTaGCGCGGAAGACCACGCCAA +
Preference number: 4 (lower is better)
Translates to: PTSHRGQAPLRGSAPSRPRTGAG*RGRPRQ
Trigger: TTGGCGTGGTCTTCCGCGCCAGCCCGCGCCAGTCCG...GGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTGAGAAGTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CCA 90 bp AACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCATCATGACGTCGGACTaGCGCGGGCTGGCGCGGAAG +
Preference number: 4 (lower is better)
Translates to: NLTGHKQAGDRTATGSGGIMTSD*RGLARK
Trigger: CTTCCGCGCCAGCCCGCGCCAGTCCGACGTCATGAT...GCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp AACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGGACACAAGCAGGCTaGGGACAGGACGGCGACAGG +
Preference number: 4 (lower is better)
Translates to: NLTGHKQAGDRTATGSGGGTQAG*GQDGDR
Trigger: CCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCC...GCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp ACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCACTCCTGACCCCAGGATaGACCTCTCTGTGCTGTCAA +
Preference number: 4 (lower is better)
Translates to: TGRRQAPAAAAAALPAVPLLTPG*TSLCCQ
Trigger: TTGACAGCACAGAGAGGTCCATCCTGGGGTCAGGAG...TGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR CCA 90 bp AACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCACTGCCCTCCACCCGTaGCTCATCCCGGGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: NLTGHKQAGDRTATGSGGTALHP*LIPGCH
Trigger: GTGACAGCCCGGGATGAGCCACGGGTGGAGGGCAGT...GCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR CCA 90 bp GACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCCTCGGCCGTAGGTaGGCAGCCTGCAGGGACCTT +
Preference number: 4 (lower is better)
Translates to: DNLTGHKQAGDRTATGSGGLGRR*AACRDL
Trigger: AAGGTCCCTGCAGGCTGCCCACCTACGGCCGAGGCC...GCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR TCA 90 bp GACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCTCGGTGGCCACGCTCTaGTGGACACCTCGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: DNLTGHKQAGDRTATGSGSVATL*WTPRAC
Trigger: GCAGGCACGAGGTGTCCATCAGAGCGTGGCCACCGA...GCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR TCA 90 bp CCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGGGTGTGGGGGGCCATCTTGTTGGTaGGTGTGCCGGCCACGATCA +
Preference number: 4 (lower is better)
Translates to: PSRPIHRMGEPAVCWGCGGPSCW*VCRPRS
Trigger: TGATCGTGGCCGGCACACTCACCAACAAGATGGCCC...CCCACACCCCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCGG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR TCA 90 bp ACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCCAGGTAGGACCATATaGAACTGCTGTAAACCAGGC +
Preference number: 4 (lower is better)
Translates to: TSRLGTGRRQAPAAAAAAPGRTI*NCCKPG
Trigger: GCCTGGTTTACAGCAGTTTCATATGGTCCTACCTGG...CGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR GCA 90 bp GACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCCTGATGGACACCTCGTaGCTGCACAGCCGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: DNLTGHKQAGDRTATGSGLMDTS*LHSRAH
Trigger: GTGGGCCCGGCTGTGCAGGCACGAGGTGTCCATCAG...GCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR GCA 90 bp GCGGCGGCGCTACCTGCGGTACCAGATCTGCAGCCTCCGCTCCCGCTTGATCTTGCAGGGCAGGCTGGGTaGTGCTTGGGCCATCGGTGG +
Preference number: 4 (lower is better)
Translates to: AAALPAVPDLQPPLPLDLAGQAG*CLGHRW
Trigger: CCACCGATGGCCCAAGCAGCACCCAGCCTGCCCTGC...AAGATCAAGCGGGAGCGGAGGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
CDS-3UTR GCA 90 bp ACAGCGCAGCCGGCTCGGCTTTGGAAGGGTTTCCCGGGCCGGCCTCTGAAGGTGCATACTCGCCCCGGCTaGTGGGTTTGGGAGCCACGG +
Preference number: 4 (lower is better)
Translates to: TAQPARLWKGFPGRPLKVHTRPG*WVWEPR
Trigger: CCGTGGCTCCCAAACCCAGCAGCCGGGGCGAGTATG...CACCTTCAGAGGCCGGCCCGGGAAACCCTTCCAAAGCCGAGCCGGCTGCGCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR GCA 90 bp AGCGGGGTGCTGCCATGTGCATCATCTCCACGGCGCAGCAGGCCAGGCCGAAGGCATACTCGCCCCGGCTaGTGGGTTTGGGAGCCACGG +
Preference number: 4 (lower is better)
Translates to: SGVLPCASSPRRSRPGRRHTRPG*WVWEPR
Trigger: CCGTGGCTCCCAAACCCAGCAGCCGGGGCGAGTATG...CCTTCGGCCTGGCCTGCTGCGCCGTGGAGATGATGCACATGGCAGCACCCCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR GCA 90 bp GTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGGGTGTGGGACTCCGGGGTGCTGCCATGTaGATCATCTCCACGGCGCAG +
Preference number: 4 (lower is better)
Translates to: VGPSIGWGSPPSAGGVGLRGAAM*IISTAQ
Trigger: CTGCGCCGTGGAGATGATGCACATGGCAGCACCCCG...GAGTCCCACACCCCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR GCA 90 bp GCCGGAGCCCGCGTGACCGCGTGCACAGCGCAGCCGGCTCGGCTTTGGAAGGGTGTCGTAGCGGGGTGCTaGCATGTGCATCATCTCCAC +
Preference number: 4 (lower is better)
Translates to: AGARVTACTAQPARLWKGVVAGC*HVHHLH
Trigger: GTGGAGATGATGCACATGGCAGCACCCCGCTACGAC...ACCCTTCCAAAGCCGAGCCGGCTGCGCTGTGCACGCGGTCACGCGGGCTCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR GCA 90 bp GCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCACATGTCGTAGCGGGGTaGTGCCATGTGCATCATCTC +
Preference number: 4 (lower is better)
Translates to: ATGSGGGGGGATCGTRSAHVVAG*CHVHHL
Trigger: GAGATGATGCACATGGCAGCACCCCGCTACGACATG...TGCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
CDS-3UTR GCA 90 bp CTAAGAGGCAGCGCTCCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGTCCACGGGCACGATaGGGTCGCAGCCCCTCACCA +
Preference number: 4 (lower is better)
Translates to: LRGSAPSRPIHRMGEPAVCPRAR*GRSPSP
Trigger: TGGTGAGGGGCTGCGACCGCATCGTGCCCGTGGACA...GACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCGGAGCGCTGCCTCTTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR GCA 90 bp AGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGGGTGTGGGACTTGTCCACGGGCACGATaGGGTCGCAGCCCCTCACCA +
Preference number: 4 (lower is better)
Translates to: SRPIHRMGEPAVCWGCGTCPRAR*GRSPSP
Trigger: TGGTGAGGGGCTGCGACCGCATCGTGCCCGTGGACA...AGTCCCACACCCCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR GCA 90 bp GTGCACAGCGCAGCCGGCTCGGCTTTGGAAGGGTTTCCCGGGCCGGCCTCTGAATGTCCACGGGCACGATaGGGTCGCAGCCCCTCACCA +
Preference number: 4 (lower is better)
Translates to: VHSAAGSALEGFPGPASECPRAR*GRSPSP
Trigger: TGGTGAGGGGCTGCGACCGCATCGTGCCCGTGGACA...TTCAGAGGCCGGCCCGGGAAACCCTTCCAAAGCCGAGCCGGCTGCGCTGTGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR GCA 90 bp CAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGTCTGCAGCTGCAGGATaGCGTAGAGCAGGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: QPHGTQAGWGQDGDRLRRSAAAG*RRAGPR
Trigger: CCGAGGCCCTGCTCTACGGCATCCTGCAGCTGCAGA...CCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR GCA 90 bp GGAGACCACGTAGCGCGGCTCCGGCATCTGGTCGTAGACCTTGCGAAGCGCTGGGGCGGCGGCGCTACCTaGGGTACCAGATCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: GDHVARLRHLVVDLAKRWGGGAT*GTRSAA
Trigger: GGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGCC...CCAGCGCTTCGCAAGGTCTACGACCAGATGCCGGAGCCGCGCTACGTGGTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR GCA 90 bp ACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGTCCCCCAGTCCCGGCTaGCACGCAGGTTCAGAACAA +
Preference number: 4 (lower is better)
Translates to: TSRDTSRLGTGRRQAPAASPSPG*HAGSEQ
Trigger: TTGTTCTGAACCTGCGTGGCAGCCGGGACTGGGGGA...CGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR GCA 90 bp AGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCATCCATAGGATGAGCCCCCACGGCCGCTaGCAGAGGCCTGCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: RGQAPLRGSAPSRPIHRMSPHGR*QRPAWA
Trigger: GGCCCAAGCAGGCCTCTGGCAGCGGCCGTGGGGGCT...CATCCTATGGATGGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414651.3
CDS-3UTR GCA 90 bp GCCGACTTCTCACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCCACAGAGACGACACTaGGCTCCGGCGCCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: ADFSQGTGSTKRQRSESAPQRRH*APAPWE
Trigger: CTCCCAGGGCGCCGGAGCGCAGTGTCGTCTCTGTGG...GGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTGAGAAGTCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546283.5
CDS-3UTR CCA 90 bp CTAAGAGGCAGCGCTCCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCAGGCTGGGTGCTGCTTaGGCCATCGGTGGCCACGCT +
Preference number: 4 (lower is better)
Translates to: LRGSAPSRPIHRMGEPAVRLGAA*AIGGHA
Trigger: AGCGTGGCCACCGATGGCCCAAGCAGCACCCAGCCT...GACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCGGAGCGCTGCCTCTTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000546283.5
CDS-3UTR CCA 90 bp GGACTGGCGCGGGCTGGCGCGGAAGACCACGCCAAAGCGGTCCATGTCGTAGCGTTTGGCAGGGCAGGCTaGGTGCTGCTTGGGCCATCG +
Preference number: 4 (lower is better)
Translates to: GLARAGAEDHAKAVHVVAFGRAG*VLLGPS
Trigger: CGATGGCCCAAGCAGCACCCAGCCTGCCCTGCCAAA...CGCTACGACATGGACCGCTTTGGCGTGGTCTTCCGCGCCAGCCCGCGCCAGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR CCA 90 bp CAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGTTTGGCAGGGCAGGCTaGGTGCTGCTTGGGCCATCG +
Preference number: 4 (lower is better)
Translates to: QPHGTQAGWGQDGDRLRRFGRAG*VLLGPS
Trigger: CGATGGCCCAAGCAGCACCCAGCCTGCCCTGCCAAA...CCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp GCAGCGCTCCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGCGAGGTCATCCAGCTTaGCCACCACATACTCGCCCC +
Preference number: 4 (lower is better)
Translates to: AALRVGPSIGWGSPPSAGRGHPA*PPHTRP
Trigger: GGGGCGAGTATGTGGTGGCCAAGCTGGATGACCTCG...CCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCGGAGCGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CCA 90 bp CTAAGAGGCAGCGCTCCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCATCATGACGTCGGACTaGCGCGGGCTGGCGCGGAAG +
Preference number: 4 (lower is better)
Translates to: LRGSAPSRPIHRMGEPAVIMTSD*RGLARK
Trigger: CTTCCGCGCCAGCCCGCGCCAGTCCGACGTCATGAT...GACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCGGAGCGCTGCCTCTTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CCA 90 bp TCCTCCGTTGGCGCAGCTCCCCATGGAGACCACGTAGCGCGGCTCCGGCATCTGATCATGACGTCGGACTaGCGCGGGCTGGCGCGGAAG +
Preference number: 4 (lower is better)
Translates to: SSVGAAPHGDHVARLRHLIMTSD*RGLARK
Trigger: CTTCCGCGCCAGCCCGCGCCAGTCCGACGTCATGAT...CAGATGCCGGAGCCGCGCTACGTGGTCTCCATGGGGAGCTGCGCCAACGGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR CCA 90 bp AGCCGGGCCCACGCTGGAGCGCAGACCAAGGATCCGGAAGCCGCGCAGGCCAGGGACCTTGCGAAGCGCTaGGGCCATCTTGTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: SRAHAGAQTKDPEAAQARDLAKR*GHLVGE
Trigger: CTCACCAACAAGATGGCCCCAGCGCTTCGCAAGGTC...CCTGGCCTGCGCGGCTTCCGGATCCTTGGTCTGCGCTCCAGCGTGGGCCCGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546172.7
CDS-3UTR CCA 90 bp CGGGGTGCTGCCATGTGCATCATCTCCACGGCGCAGCAGGCCAGGCCGAAGGTCTGGCGCAGCTCCCCATaGAGACCACGTAGCGCGGCT +
Preference number: 4 (lower is better)
Translates to: RGAAMCIISTAQQARPKVWRSSP*RPRSAA
Trigger: AGCCGCGCTACGTGGTCTCCATGGGGAGCTGCGCCA...GACCTTCGGCCTGGCCTGCTGCGCCGTGGAGATGATGCACATGGCAGCACCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR CCA 90 bp CTCCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGGGTGTGGGTCCCGGCCCTACCTaGGATGTAGATGTCCACGGG +
Preference number: 4 (lower is better)
Translates to: LRVGPSIGWGSPPSAGGVGPGPT*DVDVHG
Trigger: CCCGTGGACATCTACATCCCAGGTAGGGCCGGGACC...CACACCCCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CCA 90 bp TTCTCACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCATCCATCTCCAGCTCCCTCGTaGGCGGTGCGGTCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: FSQGTGSTKRQRSESAHPSPAPS*AVRSRP
Trigger: GGGCCGGGACCGCACCGCCCACGAGGGAGCTGGAGA...TGGATGGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTGAGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CCA 90 bp GCGGCGGCGCTACCTGCGGTACCAGATCTGCAGCCTCCGCTCCCGCTTGATCTTGGCTCCGTGTGGCGCTaGCCCTGTCTCCAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: AAALPAVPDLQPPLPLDLGSVWR*PCLQLP
Trigger: AGGGAGCTGGAGACAGGGCCAGCGCCACACGGAGCC...AAGATCAAGCGGGAGCGGAGGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR CCA 90 bp AGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGGGTGTGGGACTGGCCCATCCATAGGATaGGGGAGCCCGCCGTCTGCT +
Preference number: 4 (lower is better)
Translates to: SRPIHRMGEPAVCWGCGTGPSIG*GSPPSA
Trigger: AGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCC...AGTCCCACACCCCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CCA 90 bp GCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCTGACAGCCCTGGGTaGGCGCAGTGCCAGGGACTG +
Preference number: 4 (lower is better)
Translates to: APLRGSAPSRPIHRMGEPADSPG*AQCQGL
Trigger: CAGTCCCTGGCACTGCGCCCACCCAGGGCTGTCAGC...GGGCTCCCCCATCCTATGGATGGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR CCA 90 bp CTAAGAGGCAGCGCTCCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCCAGAGGCCTGCTTaGGCCATCGGTGGCCACGCT +
Preference number: 4 (lower is better)
Translates to: LRGSAPSRPIHRMGEPAVCQRPA*AIGGHA
Trigger: AGCGTGGCCACCGATGGCCCAAGCAGGCCTCTGGCA...GACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCGGAGCGCTGCCTCTTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414651.3
3UTR CAA 72 bp AGCTTGGCCACCACATACTCGCCCCGGCTGCTGGGTTaGGGAGCCACGGCTCTGGCCTTTGGCAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: SLATTYSPRLLG*GATALAFGRAG
Trigger: GCCTGCCCTGCCAAAGGCCAGAGCCGTGGCTCCCAAACCCAGCAGCCGGGGCGAGTATGTGGTGGCCAAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546172.7
CDS-3UTR TCA 90 bp GCCGACTTCTCACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCTCCGGCGGGCCCAGTTaGCGAGGTCATCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: ADFSQGTGSTKRQRSESASGGPS*RGHPAW
Trigger: CCAAGCTGGATGACCTCGTCAACTGGGCCCGCCGGA...GGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTGAGAAGTCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR TCA 90 bp GCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCAGATCCCTCTGATGCCTaGATACATCGCCGACTTCTC +
Preference number: 4 (lower is better)
Translates to: ATGSGGGGGGATCGTRSADPSDA*IHRRLL
Trigger: GAGAAGTCGGCGATGTATTCAGGCATCAGAGGGATC...TGCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR TCA 90 bp CACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCATCCATAGGCCACTGCCCCCGGGGTaGCCTGAACCGTGCAGAACG +
Preference number: 4 (lower is better)
Translates to: HRGQAPLRGSAPSRPIHRPLPPG*PEPCRT
Trigger: CGTTCTGCACGGTTCAGGTCACCCCGGGGGCAGTGG...CCTATGGATGGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR GCA 90 bp GGGGCCATCTTGTTGGTGAGTGTGCCGGCCACGATCATGACGTCGGACTGGCGCGCAGGGCAGGCTGGGTaGTGCTTGGGCCATCGGTGG +
Preference number: 4 (lower is better)
Translates to: GAILLVSVPATIMTSDWRAGQAG*CLGHRW
Trigger: CCACCGATGGCCCAAGCAGCACCCAGCCTGCCCTGC...GCGCCAGTCCGACGTCATGATCGTGGCCGGCACACTCACCAACAAGATGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR GCA 90 bp CACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCATCCATAGGGCAGGGCAGGCTGGGTaGTGCTTGGGCCATCGGTGG +
Preference number: 4 (lower is better)
Translates to: HRGQAPLRGSAPSRPIHRAGQAG*CLGHRW
Trigger: CCACCGATGGCCCAAGCAGCACCCAGCCTGCCCTGC...CCTATGGATGGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000546283.5
CDS-3UTR GCA 90 bp CGCAGCTCCCCATGGAGACCACGTAGCGCGGCTCCGGCATCTGGTCGTAGACCTCATACTCGCCCCGGCTaGTGGGTTTGGGAGCCACGG +
Preference number: 4 (lower is better)
Translates to: RSSPWRPRSAAPASGRRPHTRPG*WVWEPR
Trigger: CCGTGGCTCCCAAACCCAGCAGCCGGGGCGAGTATG...AGGTCTACGACCAGATGCCGGAGCCGCGCTACGTGGTCTCCATGGGGAGCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR GCA 90 bp CCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGGGTGTGGGTCTGGTCGTAGACCTTaGGAAGCGCTGGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: PSRPIHRMGEPAVCWGCGSGRRP*EALGPS
Trigger: AGATGGCCCCAGCGCTTCGCAAGGTCTACGACCAGA...CCCACACCCCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR GCA 90 bp GCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCATCCATAGGATGGGGGAGCCCTGTCCACGGGCACGATaGGGTCGCAGCCCCTCACCA +
Preference number: 4 (lower is better)
Translates to: APLRGSAPSRPIHRMGEPCPRAR*GRSPSP
Trigger: TGGTGAGGGGCTGCGACCGCATCGTGCCCGTGGACA...GGGCTCCCCCATCCTATGGATGGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR GCA 90 bp ATCATGACGTCGGACTGGCGCGGGCTGGCGCGGAAGACCACGCCAAAGCGGTCCCTGCGGTACCAGATCTaGAGCCTCCGCTCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: IMTSDWRGLARKTTPKRSLRYQI*SLRSRL
Trigger: CAAGCGGGAGCGGAGGCTGCAGATCTGGTACCGCAG...GGACCGCTTTGGCGTGGTCTTCCGCGCCAGCCCGCGCCAGTCCGACGTCATGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR GCA 90 bp CACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCATCCATAGGGGCTGCCCTCTCCACTaGCCCCGGGGTGACCTGAAC +
Preference number: 4 (lower is better)
Translates to: HRGQAPLRGSAPSRPIHRGCPLH*PRGDLN
Trigger: GTTCAGGTCACCCCGGGGGCAGTGGAGAGGGCAGCC...CCTATGGATGGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR GCA 90 bp CGGAGCCCGCGTGACCGCGTGCACAGCGCAGCCGGCTCGGCTTTGGAAGGGTTTCTTGCCCCATTGGTCTaGACTGCAGGGGAAGACGCC +
Preference number: 4 (lower is better)
Translates to: RSPRDRVHSAAGSALEGFLAPLV*TAGEDA
Trigger: GGCGTCTTCCCCTGCAGTGCAGACCAATGGGGCAAG...AAACCCTTCCAAAGCCGAGCCGGCTGCGCTGTGCACGCGGTCACGCGGGCTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR GCA 90 bp GCCGGAGCCCGCGTGACCGCGTGCACAGCGCAGCCGGCTCGGCTTTGGAAGGGTTCCACACTCGCAACTTaGCCCATTGGTCTGCACTGC +
Preference number: 4 (lower is better)
Translates to: AGARVTACTAQPARLWKGSTLAT*PIGLHC
Trigger: GCAGTGCAGACCAATGGGGCAAGTTGCGAGTGTGGA...ACCCTTCCAAAGCCGAGCCGGCTGCGCTGTGCACGCGGTCACGCGGGCTCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR GCA 90 bp AGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCATCCATAGGATGAGCAGGGCCCGGGGCTaGCCTGGACGGAGATGGAGG +
Preference number: 4 (lower is better)
Translates to: RGQAPLRGSAPSRPIHRMSRARG*PGRRWR
Trigger: CCTCCATCTCCGTCCAGGGCAGCCCCGGGCCCTGCT...CATCCTATGGATGGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR GCA 90 bp GGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGCCTGGGTGGGCGCAGTaGCAGGGACTGGGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: GRFIDNLTGHKQAGDRTAPGWAQ*QGLGAG
Trigger: GCCGGCTCCCAGTCCCTGGCACTGCGCCCACCCAGG...CGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR GCA 90 bp TTCTCACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCATCCACTTCCCAGAGGCGGATaGGAGCCCCCACGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: FSQGTGSTKRQRSESAHPLPRGG*EPPRPL
Trigger: CAGCGGCCGTGGGGGCTCGCATCCGCCTCTGGGAAG...TGGATGGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTGAGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414651.3
CDS-3UTR CCA 90 bp AACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCTGCTTGGGCCATCGGTaGCCACGCTCTGATGGACAC +
Preference number: 4 (lower is better)
Translates to: NLTGHKQAGDRTATGSGGCLGHR*PRSDGH
Trigger: GTGTCCATCAGAGCGTGGCCACCGATGGCCCAAGCA...GCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp GCGGGGTGCTGCCATGTGCATCATCTCCACGGCGCAGCAGGCCAGGCCGAAGGTTTTGGCAGGGCAGGCTaGGTGCTGCTTGGGCCATCG +
Preference number: 4 (lower is better)
Translates to: AGCCHVHHLHGAAGQAEGFGRAG*VLLGPS
Trigger: CGATGGCCCAAGCAGCACCCAGCCTGCCCTGCCAAA...ACCTTCGGCCTGGCCTGCTGCGCCGTGGAGATGATGCACATGGCAGCACCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR CCA 90 bp GCCGACTTCTCACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCTGGGAGCCACGGCTCTaGCCTTTGGCAGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: ADFSQGTGSTKRQRSESAWEPRL*PLAGQA
Trigger: AGCCTGCCCTGCCAAAGGCCAGAGCCGTGGCTCCCA...GGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTGAGAAGTCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CCA 90 bp CACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCATCCATAGGACTCGCCCCGGCTGCTaGGTTTGGGAGCCACGGCTC +
Preference number: 4 (lower is better)
Translates to: HRGQAPLRGSAPSRPIHRTRPGC*VWEPRL
Trigger: GAGCCGTGGCTCCCAAACCCAGCAGCCGGGGCGAGT...CCTATGGATGGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CCA 90 bp CGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGGGTGTGGGACGAGGTCATCCAGCTTaGCCACCACATACTCGCCCC +
Preference number: 4 (lower is better)
Translates to: RVGPSIGWGSPPSAGGVGRGHPA*PPHTRP
Trigger: GGGGCGAGTATGTGGTGGCCAAGCTGGATGACCTCG...TCCCACACCCCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CCA 90 bp GGAGGCGGCAGCCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCGGACTGGCGCGGGCTaGCGCGGAAGACCACGCCAA +
Preference number: 4 (lower is better)
Translates to: GGGSPRAGLLTTSRDTSRRTGAG*RGRPRQ
Trigger: TTGGCGTGGTCTTCCGCGCCAGCCCGCGCCAGTCCG...CCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGGCTGCCGCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539480.5
ENST00000620479.4
CDS-3UTR CCA 90 bp GCCGACTTCTCACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCATCATGACGTCGGACTaGCGCGGGCTGGCGCGGAAG +
Preference number: 4 (lower is better)
Translates to: ADFSQGTGSTKRQRSESAIMTSD*RGLARK
Trigger: CTTCCGCGCCAGCCCGCGCCAGTCCGACGTCATGAT...GGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTGAGAAGTCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CCA 90 bp CCGACTTCTCACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCTGGCGCAGCTCCCCATaGAGACCACGTAGCGCGGCT +
Preference number: 4 (lower is better)
Translates to: PTSHRGQAPLRGSAPSRPWRSSP*RPRSAA
Trigger: AGCCGCGCTACGTGGTCTCCATGGGGAGCTGCGCCA...GGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTGAGAAGTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CCA 90 bp CTCCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGGGTGTGAGTAGCCTCCTCCGTTaGCGCAGCTCCCCATGGAGA +
Preference number: 4 (lower is better)
Translates to: LRVGPSIGWGSPPSAGGVSSLLR*RSSPWR
Trigger: TCTCCATGGGGAGCTGCGCCAACGGAGGAGGCTACT...CACACCCCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CCA 90 bp AGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGGGTGTGGGACTAAGACGCCAGGGGCATaGGCAGAGCTCCTGACCCCA +
Preference number: 4 (lower is better)
Translates to: SRPIHRMGEPAVCWGCGTKTPGA*AELLTP
Trigger: TGGGGTCAGGAGCTCTGCCCATGCCCCTGGCGTCTT...AGTCCCACACCCCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR CCA 90 bp CGGAGCCCGCGTGACCGCGTGCACAGCGCAGCCGGCTCGGCTTTGGAAGGGTTTCACCTGGCAGAGCTCTaGCAAGTCCAGGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RSPRDRVHSAAGSALEGFHLAEL*QVQAAP
Trigger: TGGAGCAGCCTGGACTTGCCAGAGCTCTGCCAGGTG...AAACCCTTCCAAAGCCGAGCCGGCTGCGCTGTGCACGCGGTCACGCGGGCTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR TCA 90 bp GTGCACAGCGCAGCCGGCTCGGCTTTGGAAGGGTTTCCCGGGCCGGCCTCTGAAGGGCCATCTTGTTGGTaGGTGTGCCGGCCACGATCA +
Preference number: 4 (lower is better)
Translates to: VHSAAGSALEGFPGPASEGPSCW*VCRPRS
Trigger: TGATCGTGGCCGGCACACTCACCAACAAGATGGCCC...TTCAGAGGCCGGCCCGGGAAACCCTTCCAAAGCCGAGCCGGCTGCGCTGTGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR TCA 90 bp GCAGCGCTCCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGCCTTCAGACAACCTCTaGGGTCCGTTCTCCTTAGCG +
Preference number: 4 (lower is better)
Translates to: AALRVGPSIGWGSPPSAGPSDNL*GPFSLA
Trigger: CGCTAAGGAGAACGGACCTCAGAGGTTGTCTGAAGG...CCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCGGAGCGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546283.5
CDS-3UTR GCA 90 bp ATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCTGGACACCTCGTGCCTaGACAGCCGGGCCCACGCTG +
Preference number: 4 (lower is better)
Translates to: IDNLTGHKQAGDRTATGSWTPRA*TAGPTL
Trigger: CAGCGTGGGCCCGGCTGTGCAGGCACGAGGTGTCCA...GGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR GCA 90 bp ATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGCAGGGCAGGCTGGGTaGTGCTTGGGCCATCGGTGG +
Preference number: 4 (lower is better)
Translates to: IDNLTGHKQAGDRTATGSAGQAG*CLGHRW
Trigger: CCACCGATGGCCCAAGCAGCACCCAGCCTGCCCTGC...GGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR GCA 90 bp GCGGCGGCGCTACCTGCGGTACCAGATCTGCAGCCTCCGCTCCCGCTTGATCTTCGGGGTGCTGCCATGTaGATCATCTCCACGGCGCAG +
Preference number: 4 (lower is better)
Translates to: AAALPAVPDLQPPLPLDLRGAAM*IISTAQ
Trigger: CTGCGCCGTGGAGATGATGCACATGGCAGCACCCCG...AAGATCAAGCGGGAGCGGAGGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
CDS-3UTR GCA 90 bp GTTGGCGCAGCTCCCCATGGAGACCACGTAGCGCGGCTCCGGCATCTGGTCGTACGGGGTGCTGCCATGTaGATCATCTCCACGGCGCAG +
Preference number: 4 (lower is better)
Translates to: VGAAPHGDHVARLRHLVVRGAAM*IISTAQ
Trigger: CTGCGCCGTGGAGATGATGCACATGGCAGCACCCCG...TACGACCAGATGCCGGAGCCGCGCTACGTGGTCTCCATGGGGAGCTGCGCCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR GCA 90 bp CCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGGGTGTGGGCATGTCGTAGCGGGGTaGTGCCATGTGCATCATCTC +
Preference number: 4 (lower is better)
Translates to: PSRPIHRMGEPAVCWGCGHVVAG*CHVHHL
Trigger: GAGATGATGCACATGGCAGCACCCCGCTACGACATG...CCCACACCCCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR GCA 90 bp CGCAGCTCCCCATGGAGACCACGTAGCGCGGCTCCGGCATCTGGTCGTAGACCTTCTGCAGCTGCAGGATaGCGTAGAGCAGGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: RSSPWRPRSAAPASGRRPSAAAG*RRAGPR
Trigger: CCGAGGCCCTGCTCTACGGCATCCTGCAGCTGCAGA...AGGTCTACGACCAGATGCCGGAGCCGCGCTACGTGGTCTCCATGGGGAGCTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR GCA 90 bp GAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGCTCCCTCGTGGGCGGTaGGGTCCCGGCCCTACCTGG +
Preference number: 4 (lower is better)
Translates to: EGRFIDNLTGHKQAGDRTLPRGR*GPGPTW
Trigger: CCAGGTAGGGCCGGGACCGCACCGCCCACGAGGGAG...CGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR GCA 90 bp GAGGCAGCGCTCCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTAGAGGCACCAGGATGTaGCTCTCGCTTGCCCAAACC +
Preference number: 4 (lower is better)
Translates to: EAALRVGPSIGWGSPPSARGTRM*LSLAQT
Trigger: GGTTTGGGCAAGCGAGAGGCACATCCTGGTGCCTCT...AGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCGGAGCGCTGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR GCA 90 bp ACAGCGCAGCCGGCTCGGCTTTGGAAGGGTTTCCCGGGCCGGCCTCTGAAGGTGCAAGCCAGAGCTCTTTaGTGGGGATCCCCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: TAQPARLWKGFPGRPLKVQARAL*WGSPSP
Trigger: GGGACTGGGGGATCCCCAGCAAAGAGCTCTGGCTTG...CACCTTCAGAGGCCGGCCCGGGAAACCCTTCCAAAGCCGAGCCGGCTGCGCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR GCA 90 bp CGGGGTGCTGCCATGTGCATCATCTCCACGGCGCAGCAGGCCAGGCCGAAGGTCGCAGTGAGCAGAGGCTaGGCCACTGCACTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: RGAAMCIISTAQQARPKVAVSRG*ATALQL
Trigger: AAGCTGGAGTGCAGTGGCGCAGCCTCTGCTCACTGC...GACCTTCGGCCTGGCCTGCTGCGCCGTGGAGATGATGCACATGGCAGCACCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546172.7
CDS-3UTR CCA 90 bp AGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGGGTGTGGGACTTGCTTGGGCCATCGGTaGCCACGCTCTGATGGACAC +
Preference number: 4 (lower is better)
Translates to: SRPIHRMGEPAVCWGCGTCLGHR*PRSDGH
Trigger: GTGTCCATCAGAGCGTGGCCACCGATGGCCCAAGCA...AGTCCCACACCCCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CCA 90 bp ATCATGACGTCGGACTGGCGCGGGCTGGCGCGGAAGACCACGCCAAAGCGGTCCTGCTTGGGCCATCGGTaGCCACGCTCTGATGGACAC +
Preference number: 4 (lower is better)
Translates to: IMTSDWRGLARKTTPKRSCLGHR*PRSDGH
Trigger: GTGTCCATCAGAGCGTGGCCACCGATGGCCCAAGCA...GGACCGCTTTGGCGTGGTCTTCCGCGCCAGCCCGCGCCAGTCCGACGTCATGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR CCA 90 bp CACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCATCCATAGGCACGGCTCTGGCCTTTaGCAGGGCAGGCTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: HRGQAPLRGSAPSRPIHRHGSGL*QGRLGA
Trigger: AGCACCCAGCCTGCCCTGCCAAAGGCCAGAGCCGTG...CCTATGGATGGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CCA 90 bp CCATGGAGACCACGTAGCGCGGCTCCGGCATCTGGTCGTAGACCTTGCGAAGCGATCATGACGTCGGACTaGCGCGGGCTGGCGCGGAAG +
Preference number: 4 (lower is better)
Translates to: PWRPRSAAPASGRRPCEAIMTSD*RGLARK
Trigger: CTTCCGCGCCAGCCCGCGCCAGTCCGACGTCATGAT...CGCTTCGCAAGGTCTACGACCAGATGCCGGAGCCGCGCTACGTGGTCTCCATGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR CCA 90 bp ACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGAGTAGCCTCCTCCGTTaGCGCAGCTCCCCATGGAGA +
Preference number: 4 (lower is better)
Translates to: TTSRDTSRLGTGRRQAPASSLLR*RSSPWR
Trigger: TCTCCATGGGGAGCTGCGCCAACGGAGGAGGCTACT...CGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp GACTTCTCACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCATGAGCCCGCCGTCTGCTaGGGGTGTGGGACTCCCTCA +
Preference number: 4 (lower is better)
Translates to: DFSQGTGSTKRQRSESAHEPAVC*GCGTPS
Trigger: TGAGGGAGTCCCACACCCCCAGCAGACGGCGGGCTC...ATGGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTGAGAAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CCA 90 bp AGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCATCCATAGGATGGAGCCCGCCGTCTGCTaGGGGTGTGGGACTCCCTCA +
Preference number: 4 (lower is better)
Translates to: RGQAPLRGSAPSRPIHRMEPAVC*GCGTPS
Trigger: TGAGGGAGTCCCACACCCCCAGCAGACGGCGGGCTC...CATCCTATGGATGGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CCA 90 bp GGCGGCAGCCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGCGGCCAGGCCCCACCTaGCAGAGCTCTGGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: GGSPRAGLLTTSRDTSRLRPGPT*QSSGKS
Trigger: GGACTTGCCAGAGCTCTGCCAGGTGGGGCCTGGCCG...CAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGGCTGCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539480.5
CDS-3UTR CCA 90 bp GGCAGCCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGTGCCCTGGACGGAGATaGAGGCAGGGAGGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: GSPRAGLLTTSRDTSRLGCPGRR*RQGGWA
Trigger: CGCCCAGCCTCCCTGCCTCCATCTCCGTCCAGGGCA...CCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR CCA 90 bp CATCCCGGGCTGTCACAGGGACCTCTCGGACAAGACGCTGACCTCACTAACCCGTGCCCTGGACGGAGATaGAGGCAGGGAGGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: HPGLSQGPLGQDADLTNPCPGRR*RQGGWA
Trigger: CGCCCAGCCTCCCTGCCTCCATCTCCGTCCAGGGCA...CGGGTTAGTGAGGTCAGCGTCTTGTCCGAGAGGTCCCTGTGACAGCCCGGGATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR CCA 90 bp GACTTCTCACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCATATCGGAGTGCGCACGTaGGGGCCGCGGGTCTTTCGG +
Preference number: 4 (lower is better)
Translates to: DFSQGTGSTKRQRSESAHIGVRT*GPRVFR
Trigger: CCGAAAGACCCGCGGCCCCCACGTGCGCACTCCGAT...ATGGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTGAGAAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546283.5
CDS-3UTR CCA 90 bp CACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCATCCATAGGCGCTTTCGGCCTCCGTaGTCGTGTTGCGCCGTGCAC +
Preference number: 4 (lower is better)
Translates to: HRGQAPLRGSAPSRPIHRRFRPP*SCCAVH
Trigger: GTGCACGGCGCAACACGACCACGGAGGCCGAAAGCG...CCTATGGATGGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546283.5
CDS-3UTR TCA 90 bp CCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGATGCCGGCCACGATCATaGCGTCGGACTGGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: PRAGLLTTSRDTSRLGTGCRPRS*RRTGAG
Trigger: GCCCGCGCCAGTCCGACGTCATGATCGTGGCCGGCA...TCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR TCA 90 bp CGCGTGACCGCGTGCACAGCGCAGCCGGCTCGGCTTTGGAAGGGTTTCCCGGGCCGAGGGCAGGTTTATTaGCAACCTCACGGGACACAA +
Preference number: 4 (lower is better)
Translates to: RVTACTAQPARLWKGFPGRGQVY*QPHGTQ
Trigger: TTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCG...GCCCGGGAAACCCTTCCAAAGCCGAGCCGGCTGCGCTGTGCACGCGGTCACGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR GCA 90 bp GGAGGCGGCAGCCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGATGGACACCTCGTaGCTGCACAGCCGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: GGGSPRAGLLTTSRDTSRLMDTS*LHSRAH
Trigger: GTGGGCCCGGCTGTGCAGGCACGAGGTGTCCATCAG...CCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGGCTGCCGCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539480.5
ENST00000620479.4
CDS-3UTR GCA 90 bp TTCTCACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCATCCACATACTCGCCCCGGCTaGTGGGTTTGGGAGCCACGG +
Preference number: 4 (lower is better)
Translates to: FSQGTGSTKRQRSESAHPHTRPG*WVWEPR
Trigger: CCGTGGCTCCCAAACCCAGCAGCCGGGGCGAGTATG...TGGATGGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR GCA 90 bp CATGTCGTAGCGGGGTGCTGCCATGTGCATCATCTCCACGGCGCAGCAGGCCAGCGGGGTGCTGCCATGTaGATCATCTCCACGGCGCAG +
Preference number: 4 (lower is better)
Translates to: HVVAGCCHVHHLHGAAGQRGAAM*IISTAQ
Trigger: CTGCGCCGTGGAGATGATGCACATGGCAGCACCCCG...CTGGCCTGCTGCGCCGTGGAGATGATGCACATGGCAGCACCCCGCTACGACATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR GCA 90 bp ACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGTCGTAGCGGGGTGCTaGCATGTGCATCATCTCCAC +
Preference number: 4 (lower is better)
Translates to: TTSRDTSRLGTGRRQAPAVVAGC*HVHHLH
Trigger: GTGGAGATGATGCACATGGCAGCACCCCGCTACGAC...CGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR GCA 90 bp CTAAGAGGCAGCGCTCCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCGTCGTAGCGGGGTGCTaGCATGTGCATCATCTCCAC +
Preference number: 4 (lower is better)
Translates to: LRGSAPSRPIHRMGEPAVVVAGC*HVHHLH
Trigger: GTGGAGATGATGCACATGGCAGCACCCCGCTACGAC...GACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCGGAGCGCTGCCTCTTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR GCA 90 bp CACAGGGACCTCTCGGACAAGACGCTGACCTCACTAACCCGGCCCCCGGCCCCATCTGGTCGTAGACCTTaGGAAGCGCTGGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: HRDLSDKTLTSLTRPPAPSGRRP*EALGPS
Trigger: AGATGGCCCCAGCGCTTCGCAAGGTCTACGACCAGA...TGGGGCCGGGGGCCGGGTTAGTGAGGTCAGCGTCTTGTCCGAGAGGTCCCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR GCA 90 bp GCTGGGGCCATCTTGTTGGTGAGTGTGCCGGCCACGATCATGACGTCGGACTGGTGTCCACGGGCACGATaGGGTCGCAGCCCCTCACCA +
Preference number: 4 (lower is better)
Translates to: AGAILLVSVPATIMTSDWCPRAR*GRSPSP
Trigger: TGGTGAGGGGCTGCGACCGCATCGTGCCCGTGGACA...CCAGTCCGACGTCATGATCGTGGCCGGCACACTCACCAACAAGATGGCCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR GCA 90 bp GCCGACTTCTCACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCAAAGGACAAGGCCACTaGAGGGCCTGGGAAAGGGCG +
Preference number: 4 (lower is better)
Translates to: ADFSQGTGSTKRQRSESAKGQGH*RAWERA
Trigger: CGCCCTTTCCCAGGCCCTGCAGTGGCCTTGTCCTTT...GGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTGAGAAGTCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR GCA 90 bp CGGGCCCAGTTGACGAGGTCATCCAGCTTGGCCACCACATACTCGCCCCGGCTGCAGAGGCTGCGCCACTaGACTCCAGCTTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: RAQLTRSSSLATTYSPRLQRLRH*TPAWVT
Trigger: TGTCACCCAAGCTGGAGTGCAGTGGCGCAGCCTCTG...CAGCCGGGGCGAGTATGTGGTGGCCAAGCTGGATGACCTCGTCAACTGGGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546172.7
CDS-3UTR GCA 90 bp GAGGCAGCGCTCCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTAACGCGCTAACCGATTaGGCCACAGAGACGACACTG +
Preference number: 4 (lower is better)
Translates to: EAALRVGPSIGWGSPPSANALTD*ATETTL
Trigger: CAGTGTCGTCTCTGTGGCGCAATCGGTTAGCGCGTT...AGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCGGAGCGCTGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546283.5
CDS-3UTR GCA 90 bp GACTTCTCACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCATCCTCCGTGGTCGTGTTaGGCCGTGCACCCCCAGATC +
Preference number: 4 (lower is better)
Translates to: DFSQGTGSTKRQRSESAHPPWSC*AVHPQI
Trigger: GATCTGGGGGTGCACGGCGCAACACGACCACGGAGG...ATGGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTGAGAAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546283.5
CDS-3UTR CCA 90 bp CGGCAGCCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGAGGCTGGGTGCTGCTTaGGCCATCGGTGGCCACGCT +
Preference number: 4 (lower is better)
Translates to: RQPEGRFIDNLTGHKQAGRLGAA*AIGGHA
Trigger: AGCGTGGCCACCGATGGCCCAAGCAGCACCCAGCCT...CCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGGCTGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233627.14
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp ATCGCCGACTTCTCACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGAGGCTGGGTGCTGCTTaGGCCATCGGTGGCCACGCT +
Preference number: 4 (lower is better)
Translates to: IADFSQGTGSTKRQRSESRLGAA*AIGGHA
Trigger: AGCGTGGCCACCGATGGCCCAAGCAGCACCCAGCCT...CGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTGAGAAGTCGGCGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000546283.5
CDS-3UTR CCA 90 bp TGTCCACGGGCACGATGCGGTCGCAGCCCCTCACCACCGAGTAGGAATAGTGGTAGGCTGGGTGCTGCTTaGGCCATCGGTGGCCACGCT +
Preference number: 4 (lower is better)
Translates to: CPRARCGRSPSPPSRNSGRLGAA*AIGGHA
Trigger: AGCGTGGCCACCGATGGCCCAAGCAGCACCCAGCCT...ACCACTATTCCTACTCGGTGGTGAGGGGCTGCGACCGCATCGTGCCCGTGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR CCA 90 bp GGGAGGCGGCAGCCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGAGGCTGGGTGCTGCTTaGGCCATCGGTGGCCACGCT +
Preference number: 4 (lower is better)
Translates to: GRRQPEGRFIDNLTGHKQRLGAA*AIGGHA
Trigger: AGCGTGGCCACCGATGGCCCAAGCAGCACCCAGCCT...CTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGGCTGCCGCCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539480.5
ENST00000620479.4
CDS-3UTR CCA 90 bp TGTCCACGGGCACGATGCGGTCGCAGCCCCTCACCACCGAGTAGGAATAGTGGTCACGGCTCTGGCCTTTaGCAGGGCAGGCTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: CPRARCGRSPSPPSRNSGHGSGL*QGRLGA
Trigger: AGCACCCAGCCTGCCCTGCCAAAGGCCAGAGCCGTG...ACCACTATTCCTACTCGGTGGTGAGGGGCTGCGACCGCATCGTGCCCGTGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR CCA 90 bp AGACCACGTAGCGCGGCTCCGGCATCTGGTCGTAGACCTTGCGAAGCGCTGGGGCGAGGTCATCCAGCTTaGCCACCACATACTCGCCCC +
Preference number: 4 (lower is better)
Translates to: RPRSAAPASGRRPCEALGRGHPA*PPHTRP
Trigger: GGGGCGAGTATGTGGTGGCCAAGCTGGATGACCTCG...CCCCAGCGCTTCGCAAGGTCTACGACCAGATGCCGGAGCCGCGCTACGTGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR CCA 90 bp TTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCGGACTGGCGCGGGCTaGCGCGGAAGACCACGCCAA +
Preference number: 4 (lower is better)
Translates to: LLTTSRDTSRLGTGRRQARTGAG*RGRPRQ
Trigger: TTGGCGTGGTCTTCCGCGCCAGCCCGCGCCAGTCCG...AGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp GGCAGCCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGTGGCGCAGCTCCCCATaGAGACCACGTAGCGCGGCT +
Preference number: 4 (lower is better)
Translates to: GSPRAGLLTTSRDTSRLGWRSSP*RPRSAA
Trigger: AGCCGCGCTACGTGGTCTCCATGGGGAGCTGCGCCA...CCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp CGGCAGCCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGTGGCGCAGCTCCCCATaGAGACCACGTAGCGCGGCT +
Preference number: 4 (lower is better)
Translates to: RQPEGRFIDNLTGHKQAGWRSSP*RPRSAA
Trigger: AGCCGCGCTACGTGGTCTCCATGGGGAGCTGCGCCA...CCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGGCTGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233627.14
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp GCGGCGGCGCTACCTGCGGTACCAGATCTGCAGCCTCCGCTCCCGCTTGATCTTAGTAGCCTCCTCCGTTaGCGCAGCTCCCCATGGAGA +
Preference number: 4 (lower is better)
Translates to: AAALPAVPDLQPPLPLDLSSLLR*RSSPWR
Trigger: TCTCCATGGGGAGCTGCGCCAACGGAGGAGGCTACT...AAGATCAAGCGGGAGCGGAGGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
CDS-3UTR CCA 90 bp CTGCCATGTGCATCATCTCCACGGCGCAGCAGGCCAGGCCGAAGGTCATGGGCCCGTAGGTGGGCAGCCTaGGATGTAGATGTCCACGGG +
Preference number: 4 (lower is better)
Translates to: LPCASSPRRSRPGRRSWARRWAA*DVDVHG
Trigger: CCCGTGGACATCTACATCCCAGGCTGCCCACCTACG...GGCCCATGACCTTCGGCCTGGCCTGCTGCGCCGTGGAGATGATGCACATGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR CCA 90 bp CAGCCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACCGGCCAGGCCCCACCTaGCAGAGCTCTGGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: QPEGRFIDNLTGHKQAGDRPGPT*QSSGKS
Trigger: GGACTTGCCAGAGCTCTGCCAGGTGGGGCCTGGCCG...GTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR CCA 90 bp AGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACACGGAGGGAGGGGAGGTaGCCCAGAGCCCGGGCATCC +
Preference number: 4 (lower is better)
Translates to: RFIDNLTGHKQAGDRTATRREGR*PRARAS
Trigger: GGATGCCCGGGCTCTGGGCCACCTCCCCTCCCTCCG...TGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR CCA 90 bp GCTCATCCCGGGCTGTCACAGGGACCTCTCGGACAAGACGCTGACCTCACTAACCAGCCGGCTCGGCTTTaGAAGGGTTTCCCGGGCCGG +
Preference number: 4 (lower is better)
Translates to: AHPGLSQGPLGQDADLTNQPARL*KGFPGR
Trigger: CCGGCCCGGGAAACCCTTCCAAAGCCGAGCCGGCTG...GTTAGTGAGGTCAGCGTCTTGTCCGAGAGGTCCCTGTGACAGCCCGGGATGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR CCA 90 bp AGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCATCCATAGGATGGGGCAGGCTGGGTGCTaGCACAGAGACACACGGGCA +
Preference number: 4 (lower is better)
Translates to: RGQAPLRGSAPSRPIHRMGQAGC*HRDTRA
Trigger: TGCCCGTGTGTCTCTGTGCCAGCACCCAGCCTGCCC...CATCCTATGGATGGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414651.3
CDS-3UTR CCA 90 bp ACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGGGAGGAGCTCAGTCTaGGATGTAGATGTCCACGGG +
Preference number: 4 (lower is better)
Translates to: TTSRDTSRLGTGRRQAPAGRSSV*DVDVHG
Trigger: CCCGTGGACATCTACATCCCAGACTGAGCTCCTCCC...CGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539480.5
CDS-3UTR CCA 90 bp TTCTCACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCATCCAGCGGAAACCGGAACCTaGAGCCGGGAGGTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: FSQGTGSTKRQRSESAHPAETGT*SREVPL
Trigger: CAGCGGAACCTCCCGGCTCCAGGTTCCGGTTTCCGC...TGGATGGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546283.5
CDS-3UTR CCA 90 bp GGGAGGCGGCAGCCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGGGCCTCGGCCGTGGTaGGCAGCCTGGGATGTAGAT +
Preference number: 4 (lower is better)
Translates to: GRRQPEGRFIDNLTGHKQGPRPW*AAWDVD
Trigger: ATCTACATCCCAGGCTGCCCACCACGGCCGAGGCCC...CTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGGCTGCCGCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620479.4
CDS-3UTR TCA 90 bp CAGCCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACTCGGTGGCCACGCTCTaGTGGACACCTCGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: QPEGRFIDNLTGHKQAGDSVATL*WTPRAC
Trigger: GCAGGCACGAGGTGTCCATCAGAGCGTGGCCACCGA...GTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR TCA 90 bp CAGCCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACTCCGGCGGGCCCAGTTaGCGAGGTCATCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: QPEGRFIDNLTGHKQAGDSGGPS*RGHPAW
Trigger: CCAAGCTGGATGACCTCGTCAACTGGGCCCGCCGGA...GTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR TCA 90 bp GAGGCAGCGCTCCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGATCCCTCTGATGCCTaGATACATCGCCGACTTCTC +
Preference number: 4 (lower is better)
Translates to: EAALRVGPSIGWGSPPSADPSDA*IHRRLL
Trigger: GAGAAGTCGGCGATGTATTCAGGCATCAGAGGGATC...AGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCGGAGCGCTGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000546283.5
CDS-3UTR TCA 90 bp CCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGTCTGAAGGTGGAGGCTaGCAGCCCTGGGTGGGCGCA +
Preference number: 4 (lower is better)
Translates to: PEGRFIDNLTGHKQAGDRSEGGG*QPWVGA
Trigger: TGCGCCCACCCAGGGCTGTCAGCCTCCACCTTCAGA...CCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR GCA 90 bp AGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGTGGACACCTCGTGCCTaGACAGCCGGGCCCACGCTG +
Preference number: 4 (lower is better)
Translates to: RAGLLTTSRDTSRLGTGRWTPRA*TAGPTL
Trigger: CAGCGTGGGCCCGGCTGTGCAGGCACGAGGTGTCCA...CCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR GCA 90 bp GCCGACTTCTCACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCTCTGGTCGTAGACCTTaGGAAGCGCTGGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: ADFSQGTGSTKRQRSESASGRRP*EALGPS
Trigger: AGATGGCCCCAGCGCTTCGCAAGGTCTACGACCAGA...GGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTGAGAAGTCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR GCA 90 bp TTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCGGCGGCGGCGCTACCTaGGGTACCAGATCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: FIDNLTGHKQAGDRTATGGGGAT*GTRSAA
Trigger: GGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGCC...GCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp AGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCATCCATAGGATGTTTGGCAGGGCAGGCTaGGTGCTGCTTGGGCCATCG +
Preference number: 4 (lower is better)
Translates to: RGQAPLRGSAPSRPIHRMFGRAG*VLLGPS
Trigger: CGATGGCCCAAGCAGCACCCAGCCTGCCCTGCCAAA...CATCCTATGGATGGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000546283.5
CDS-3UTR CCA 90 bp GCTCATCCCGGGCTGTCACAGGGACCTCTCGGACAAGACGCTGACCTCACTAACCACGGCTCTGGCCTTTaGCAGGGCAGGCTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: AHPGLSQGPLGQDADLTNHGSGL*QGRLGA
Trigger: AGCACCCAGCCTGCCCTGCCAAAGGCCAGAGCCGTG...GTTAGTGAGGTCAGCGTCTTGTCCGAGAGGTCCCTGTGACAGCCCGGGATGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR CCA 90 bp GGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGCACGGCTCTGGCCTTTaGCAGGGCAGGCTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: GRFIDNLTGHKQAGDRTAHGSGL*QGRLGA
Trigger: AGCACCCAGCCTGCCCTGCCAAAGGCCAGAGCCGTG...CGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp CCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGTGGGAGCCACGGCTCTaGCCTTTGGCAGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PEGRFIDNLTGHKQAGDRWEPRL*PLAGQA
Trigger: AGCCTGCCCTGCCAAAGGCCAGAGCCGTGGCTCCCA...CCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp AGCCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAACTCGCCCCGGCTGCTaGGTTTGGGAGCCACGGCTC +
Preference number: 4 (lower is better)
Translates to: SPRAGLLTTSRDTSRLGTTRPGC*VWEPRL
Trigger: GAGCCGTGGCTCCCAAACCCAGCAGCCGGGGCGAGT...TGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp GCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGAACTCGCCCCGGCTGCTaGGTTTGGGAGCCACGGCTC +
Preference number: 4 (lower is better)
Translates to: AGLLTTSRDTSRLGTGRRTRPGC*VWEPRL
Trigger: GAGCCGTGGCTCCCAAACCCAGCAGCCGGGGCGAGT...TCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp GGCAGCCTGGGATGTAGATGTCCACGGGCACGATGCGGTCGCAGCCCCTCACCAGACCTTGCGAAGCGCTaGGGCCATCTTGTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: GSLGCRCPRARCGRSPSPDLAKR*GHLVGE
Trigger: CTCACCAACAAGATGGCCCCAGCGCTTCGCAAGGTC...TGGTGAGGGGCTGCGACCGCATCGTGCCCGTGGACATCTACATCCCAGGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR CCA 90 bp CCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGTGGCGCAGCTCCCCATaGAGACCACGTAGCGCGGCT +
Preference number: 4 (lower is better)
Translates to: PEGRFIDNLTGHKQAGDRWRSSP*RPRSAA
Trigger: AGCCGCGCTACGTGGTCTCCATGGGGAGCTGCGCCA...CCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp CAGCCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACGGGACACAAGCAGGCTaGGGACAGGACGGCGACAGG +
Preference number: 4 (lower is better)
Translates to: QPEGRFIDNLTGHKQAGDGTQAG*GQDGDR
Trigger: CCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCC...GTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp GACTTCTCACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCATGGTCCCGGCCCTACCTaGGATGTAGATGTCCACGGG +
Preference number: 4 (lower is better)
Translates to: DFSQGTGSTKRQRSESAHGPGPT*DVDVHG
Trigger: CCCGTGGACATCTACATCCCAGGTAGGGCCGGGACC...ATGGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTGAGAAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CCA 90 bp GGCAGCCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGGCCCTCAGGACTCAATaGGGGCCAGCGCTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: GSPRAGLLTTSRDTSRLGALRTQ*GPALSR
Trigger: TCTGCTGAGCGCTGGCCCCCATTGAGTCCTGAGGGC...CCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGGCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR CCA 90 bp CCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGAGCTGACAGCCCTGGGTaGGCGCAGTGCCAGGGACTG +
Preference number: 4 (lower is better)
Translates to: PRAGLLTTSRDTSRLGTGADSPG*AQCQGL
Trigger: CAGTCCCTGGCACTGCGCCCACCCAGGGCTGTCAGC...TCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR TCA 90 bp TTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGGCCCAGTTaGCGAGGTCATCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: FIDNLTGHKQAGDRTATGSGGPS*RGHPAW
Trigger: CCAAGCTGGATGACCTCGTCAACTGGGCCCGCCGGA...GCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR TCA 90 bp TTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTTCCGGCGGGCCCAGTTaGCGAGGTCATCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: LLTTSRDTSRLGTGRRQASGGPS*RGHPAW
Trigger: CCAAGCTGGATGACCTCGTCAACTGGGCCCGCCGGA...AGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR TCA 90 bp AGCCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACATCCGGCGGGCCCAGTTaGCGAGGTCATCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: SPRAGLLTTSRDTSRLGTSGGPS*RGHPAW
Trigger: CCAAGCTGGATGACCTCGTCAACTGGGCCCGCCGGA...TGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR TCA 90 bp CATCTTGTTGGTGAGTGTGCCGGCCACGATCATGACGTCGGACTGGCGCGGGCTGGGCCATCTTGTTGGTaGGTGTGCCGGCCACGATCA +
Preference number: 4 (lower is better)
Translates to: HLVGECAGHDHDVGLARAGPSCW*VCRPRS
Trigger: TGATCGTGGCCGGCACACTCACCAACAAGATGGCCC...AGCCCGCGCCAGTCCGACGTCATGATCGTGGCCGGCACACTCACCAACAAGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR TCA 90 bp GCGGGGTGCTGCCATGTGCATCATCTCCACGGCGCAGCAGGCCAGGCCGAAGGTCGAGGGCAGGTTTATTaGCAACCTCACGGGACACAA +
Preference number: 4 (lower is better)
Translates to: AGCCHVHHLHGAAGQAEGRGQVY*QPHGTQ
Trigger: TTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCG...ACCTTCGGCCTGGCCTGCTGCGCCGTGGAGATGATGCACATGGCAGCACCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR GCA 90 bp TTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCCATACTCGCCCCGGCTaGTGGGTTTGGGAGCCACGG +
Preference number: 4 (lower is better)
Translates to: FIDNLTGHKQAGDRTATGHTRPG*WVWEPR
Trigger: CCGTGGCTCCCAAACCCAGCAGCCGGGGCGAGTATG...GCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR GCA 90 bp TCGCCGACTTCTCACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGGTCGTAGCGGGGTGCTaGCATGTGCATCATCTCCAC +
Preference number: 4 (lower is better)
Translates to: SPTSHRGQAPLRGSAPSRVVAGC*HVHHLH
Trigger: GTGGAGATGATGCACATGGCAGCACCCCGCTACGAC...CCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTGAGAAGTCGGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR GCA 90 bp CTGGGTGCTGCTTGGGCCATCGGTGGCCACGCTCTGATGGACACCTCGTGCCTGCATGTCGTAGCGGGGTaGTGCCATGTGCATCATCTC +
Preference number: 4 (lower is better)
Translates to: LGAAWAIGGHALMDTSCLHVVAG*CHVHHL
Trigger: GAGATGATGCACATGGCAGCACCCCGCTACGACATG...CAGGCACGAGGTGTCCATCAGAGCGTGGCCACCGATGGCCCAAGCAGCACCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546172.7
CDS-3UTR GCA 90 bp GAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGTGTCCACGGGCACGATaGGGTCGCAGCCCCTCACCA +
Preference number: 4 (lower is better)
Translates to: EGRFIDNLTGHKQAGDRTCPRAR*GRSPSP
Trigger: TGGTGAGGGGCTGCGACCGCATCGTGCCCGTGGACA...CGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR GCA 90 bp AGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGTGTCCACGGGCACGATaGGGTCGCAGCCCCTCACCA +
Preference number: 4 (lower is better)
Translates to: RAGLLTTSRDTSRLGTGRCPRAR*GRSPSP
Trigger: TGGTGAGGGGCTGCGACCGCATCGTGCCCGTGGACA...CCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp GGAGGCGGCAGCCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGTGCTTGGGCCATCGGTaGCCACGCTCTGATGGACAC +
Preference number: 4 (lower is better)
Translates to: GGGSPRAGLLTTSRDTSRCLGHR*PRSDGH
Trigger: GTGTCCATCAGAGCGTGGCCACCGATGGCCCAAGCA...CCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGGCTGCCGCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539480.5
ENST00000620479.4
CDS-3UTR CCA 90 bp TTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCAGGCTGGGTGCTGCTTaGGCCATCGGTGGCCACGCT +
Preference number: 4 (lower is better)
Translates to: FIDNLTGHKQAGDRTATGRLGAA*AIGGHA
Trigger: AGCGTGGCCACCGATGGCCCAAGCAGCACCCAGCCT...GCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp GGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGCACGGCTCTGGCCTTTaGCAGGGCAGGCTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: GLLTTSRDTSRLGTGRRQHGSGL*QGRLGA
Trigger: AGCACCCAGCCTGCCCTGCCAAAGGCCAGAGCCGTG...CTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp GAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGCACGGCTCTGGCCTTTaGCAGGGCAGGCTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: EGRFIDNLTGHKQAGDRTHGSGL*QGRLGA
Trigger: AGCACCCAGCCTGCCCTGCCAAAGGCCAGAGCCGTG...CGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp GGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGTGGGAGCCACGGCTCTaGCCTTTGGCAGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: GLLTTSRDTSRLGTGRRQWEPRL*PLAGQA
Trigger: AGCCTGCCCTGCCAAAGGCCAGAGCCGTGGCTCCCA...CTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp TTCTCACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCATCCACGAGGTCATCCAGCTTaGCCACCACATACTCGCCCC +
Preference number: 4 (lower is better)
Translates to: FSQGTGSTKRQRSESAHPRGHPA*PPHTRP
Trigger: GGGGCGAGTATGTGGTGGCCAAGCTGGATGACCTCG...TGGATGGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CCA 90 bp CGGCAGCCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGCGAGGTCATCCAGCTTaGCCACCACATACTCGCCCC +
Preference number: 4 (lower is better)
Translates to: RQPEGRFIDNLTGHKQAGRGHPA*PPHTRP
Trigger: GGGGCGAGTATGTGGTGGCCAAGCTGGATGACCTCG...CCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGGCTGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233627.14
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp GGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGATCATGACGTCGGACTaGCGCGGGCTGGCGCGGAAG +
Preference number: 4 (lower is better)
Translates to: GLLTTSRDTSRLGTGRRQIMTSD*RGLARK
Trigger: CTTCCGCGCCAGCCCGCGCCAGTCCGACGTCATGAT...CTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp CCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGAATCATGACGTCGGACTaGCGCGGGCTGGCGCGGAAG +
Preference number: 4 (lower is better)
Translates to: PRAGLLTTSRDTSRLGTGIMTSD*RGLARK
Trigger: CTTCCGCGCCAGCCCGCGCCAGTCCGACGTCATGAT...TCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp TCGCCGACTTCTCACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGGACCTTGCGAAGCGCTaGGGCCATCTTGTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: SPTSHRGQAPLRGSAPSRDLAKR*GHLVGE
Trigger: CTCACCAACAAGATGGCCCCAGCGCTTCGCAAGGTC...CCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTGAGAAGTCGGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CCA 90 bp TTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTTGGCGCAGCTCCCCATaGAGACCACGTAGCGCGGCT +
Preference number: 4 (lower is better)
Translates to: LLTTSRDTSRLGTGRRQAWRSSP*RPRSAA
Trigger: AGCCGCGCTACGTGGTCTCCATGGGGAGCTGCGCCA...AGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp TTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCGGGACACAAGCAGGCTaGGGACAGGACGGCGACAGG +
Preference number: 4 (lower is better)
Translates to: FIDNLTGHKQAGDRTATGGTQAG*GQDGDR
Trigger: CCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCC...GCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp TTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCGGGGGATGGCCCTCGTaGGACCACGTGAGGTGCAAG +
Preference number: 4 (lower is better)
Translates to: FIDNLTGHKQAGDRTATGGGWPS*DHVRCK
Trigger: CTTGCACCTCACGTGGTCCCACGAGGGCCATCCCCC...GCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR CCA 90 bp TCGCCGACTTCTCACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCGCAACTTGCCCCATTaGTCTGCACTGCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SPTSHRGQAPLRGSAPSRRNLPH*SALQGK
Trigger: CTTCCCCTGCAGTGCAGACCAATGGGGCAAGTTGCG...CCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTGAGAAGTCGGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR TCA 90 bp AGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACATCGGTGGCCACGCTCTaGTGGACACCTCGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: RFIDNLTGHKQAGDRTATSVATL*WTPRAC
Trigger: GCAGGCACGAGGTGTCCATCAGAGCGTGGCCACCGA...TGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR GCA 90 bp GCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACGGGGTGCTGCCATGTaGATCATCTCCACGGCGCAG +
Preference number: 4 (lower is better)
Translates to: AGLLTTSRDTSRLGTGRRRGAAM*IISTAQ
Trigger: CTGCGCCGTGGAGATGATGCACATGGCAGCACCCCG...TCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR GCA 90 bp AGCCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACACGGGGTGCTGCCATGTaGATCATCTCCACGGCGCAG +
Preference number: 4 (lower is better)
Translates to: SPRAGLLTTSRDTSRLGTRGAAM*IISTAQ
Trigger: CTGCGCCGTGGAGATGATGCACATGGCAGCACCCCG...TGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR GCA 90 bp TCGCCGACTTCTCACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCATGTCGTAGCGGGGTaGTGCCATGTGCATCATCTC +
Preference number: 4 (lower is better)
Translates to: SPTSHRGQAPLRGSAPSRHVVAG*CHVHHL
Trigger: GAGATGATGCACATGGCAGCACCCCGCTACGACATG...CCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTGAGAAGTCGGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR GCA 90 bp GCAGCTCCCCATGGAGACCACGTAGCGCGGCTCCGGCATCTGGTCGTAGACCTTCATGTCGTAGCGGGGTaGTGCCATGTGCATCATCTC +
Preference number: 4 (lower is better)
Translates to: AAPHGDHVARLRHLVVDLHVVAG*CHVHHL
Trigger: GAGATGATGCACATGGCAGCACCCCGCTACGACATG...AAGGTCTACGACCAGATGCCGGAGCCGCGCTACGTGGTCTCCATGGGGAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR GCA 90 bp GGGCTCTCTGCGCATGAGCTAATGCCGCACGCAGCACAGGGTGGCCAAGAACAGTCTGGTCGTAGACCTTaGGAAGCGCTGGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: GLSAHELMPHAAQGGQEQSGRRP*EALGPS
Trigger: AGATGGCCCCAGCGCTTCGCAAGGTCTACGACCAGA...CTGTTCTTGGCCACCCTGTGCTGCGTGCGGCATTAGCTCATGCGCAGAGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR GCA 90 bp CCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGATCTGCAGCTGCAGGATaGCGTAGAGCAGGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: PRAGLLTTSRDTSRLGTGSAAAG*RRAGPR
Trigger: CCGAGGCCCTGCTCTACGGCATCCTGCAGCTGCAGA...TCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR GCA 90 bp GCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACTGCGGTACCAGATCTaGAGCCTCCGCTCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: AGLLTTSRDTSRLGTGRRLRYQI*SLRSRL
Trigger: CAAGCGGGAGCGGAGGCTGCAGATCTGGTACCGCAG...TCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR GCA 90 bp AGCCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACACTGCGGTACCAGATCTaGAGCCTCCGCTCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: SPRAGLLTTSRDTSRLGTLRYQI*SLRSRL
Trigger: CAAGCGGGAGCGGAGGCTGCAGATCTGGTACCGCAG...TGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR GCA 90 bp TTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCGTAGGTGGGCAGCCTaGAGGGACCTTGCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: LLTTSRDTSRLGTGRRQARRWAA*RDLASV
Trigger: GACTGAGGCAAGGTCCCTGCAGGCTGCCCACCTACG...AGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR GCA 90 bp AGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCCGGGAGGTAGAGGTTaGAGTGAGCAGAGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: RAGLLTTSRDTSRLGTGRPGGRG*SEQRLR
Trigger: GCGCAGCCTCTGCTCACTGCAACCTCTACCTCCCGG...CCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546172.7
CDS-3UTR CCA 90 bp AGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGTTTGGCAGGGCAGGCTaGGTGCTGCTTGGGCCATCG +
Preference number: 4 (lower is better)
Translates to: RAGLLTTSRDTSRLGTGRFGRAG*VLLGPS
Trigger: CGATGGCCCAAGCAGCACCCAGCCTGCCCTGCCAAA...CCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp CCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGCGAGGTCATCCAGCTTaGCCACCACATACTCGCCCC +
Preference number: 4 (lower is better)
Translates to: PEGRFIDNLTGHKQAGDRRGHPA*PPHTRP
Trigger: GGGGCGAGTATGTGGTGGCCAAGCTGGATGACCTCG...CCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp GCGGTCGCAGCCCCTCACCACCGAGTAGGAATAGTGGTAGTAGCCTCCTCCGTTCGAGGTCATCCAGCTTaGCCACCACATACTCGCCCC +
Preference number: 4 (lower is better)
Translates to: AVAAPHHRVGIVVVASSVRGHPA*PPHTRP
Trigger: GGGGCGAGTATGTGGTGGCCAAGCTGGATGACCTCG...AACGGAGGAGGCTACTACCACTATTCCTACTCGGTGGTGAGGGGCTGCGACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR CCA 90 bp GGCAGCCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGGACCTTGCGAAGCGCTaGGGCCATCTTGTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: GSPRAGLLTTSRDTSRLGDLAKR*GHLVGE
Trigger: CTCACCAACAAGATGGCCCCAGCGCTTCGCAAGGTC...CCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGGCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000539480.5
ENST00000546172.7
CDS-3UTR CCA 90 bp AGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCATCCATAGGATGGACCTTGCGAAGCGCTaGGGCCATCTTGTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: RGQAPLRGSAPSRPIHRMDLAKR*GHLVGE
Trigger: CTCACCAACAAGATGGCCCCAGCGCTTCGCAAGGTC...CATCCTATGGATGGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CCA 90 bp AGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGGGCCTCGGCCGTAGGTaGGCAGCCTGGGATGTAGAT +
Preference number: 4 (lower is better)
Translates to: RAGLLTTSRDTSRLGTGRGLGRR*AAWDVD
Trigger: ATCTACATCCCAGGCTGCCCACCTACGGCCGAGGCC...CCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233627.14
ENST00000534853.5
ENST00000546172.7
CDS-3UTR CCA 90 bp ATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCACAGCACCGCCATCTTaGCCTCGGCCTTCAGACAAC +
Preference number: 4 (lower is better)
Translates to: IDNLTGHKQAGDRTATGSTAPPS*PRPSDN
Trigger: GTTGTCTGAAGGCCGAGGCCAAGATGGCGGTGCTGT...GGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR CCA 90 bp GACTTCTCACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCATACAGCACCGCCATCTTaGCCTCGGCCTTCAGACAAC +
Preference number: 4 (lower is better)
Translates to: DFSQGTGSTKRQRSESAHTAPPS*PRPSDN
Trigger: GTTGTCTGAAGGCCGAGGCCAAGATGGCGGTGCTGT...ATGGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTGAGAAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000546283.5
CDS-3UTR CCA 90 bp TGCAAGGAGGGAGGAGTACAGTCCACACTCGCAACTTGCCCCATTGGTCTGCACGCCAGAGCTCTTTGCTaGGGATCCCCCAGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: CKEGGVQSTLATCPIGLHARALC*GSPSPG
Trigger: GCCGGGACTGGGGGATCCCCAGCAAAGAGCTCTGGC...GTGCAGACCAATGGGGCAAGTTGCGAGTGTGGACTGTACTCCTCCCTCCTTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR CCA 90 bp AGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAACTGCCCTCCACCCGTaGCTCATCCCGGGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: RFIDNLTGHKQAGDRTATTALHP*LIPGCH
Trigger: GTGACAGCCCGGGATGAGCCACGGGTGGAGGGCAGT...TGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR CCA 90 bp AGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCCGTGGTGGGCAGCCTaGGATGTAGATGTCCACGGG +
Preference number: 4 (lower is better)
Translates to: RAGLLTTSRDTSRLGTGRPWWAA*DVDVHG
Trigger: CCCGTGGACATCTACATCCCAGGCTGCCCACCACGG...CCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620479.4
3UTR CAA 72 bp AAGGTCATGGGCCACAGAGAACTCCGGCGGGCCCAGTaGACGAGGTCATCCAGCTTGGCCACCACATACTCG +
Preference number: 4 (lower is better)
Translates to: KVMGHRELRRAQ*TRSSSLATTYS
Trigger: CGAGTATGTGGTGGCCAAGCTGGATGACCTCGTCAACTGGGCCCGCCGGAGTTCTCTGTGGCCCATGACCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546172.7
CDS-3UTR TCA 90 bp TTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCGGGCCATCTTGTTGGTaGGTGTGCCGGCCACGATCA +
Preference number: 4 (lower is better)
Translates to: FIDNLTGHKQAGDRTATGGPSCW*VCRPRS
Trigger: TGATCGTGGCCGGCACACTCACCAACAAGATGGCCC...GCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR TCA 90 bp AGGAATAGTGGTAGTAGCCTCCTCCGTTGGCGCAGCTCCCCATGGAGACCACGTGGGCCATCTTGTTGGTaGGTGTGCCGGCCACGATCA +
Preference number: 4 (lower is better)
Translates to: RNSGSSLLRWRSSPWRPRGPSCW*VCRPRS
Trigger: TGATCGTGGCCGGCACACTCACCAACAAGATGGCCC...ACGTGGTCTCCATGGGGAGCTGCGCCAACGGAGGAGGCTACTACCACTATTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR TCA 90 bp GCAGCTCCCCATGGAGACCACGTAGCGCGGCTCCGGCATCTGGTCGTAGACCTTCGAGGGCAGGTTTATTaGCAACCTCACGGGACACAA +
Preference number: 4 (lower is better)
Translates to: AAPHGDHVARLRHLVVDLRGQVY*QPHGTQ
Trigger: TTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCG...AAGGTCTACGACCAGATGCCGGAGCCGCGCTACGTGGTCTCCATGGGGAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR GCA 90 bp GGCAGCCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGCATGTCGTAGCGGGGTaGTGCCATGTGCATCATCTC +
Preference number: 4 (lower is better)
Translates to: GSPRAGLLTTSRDTSRLGHVVAG*CHVHHL
Trigger: GAGATGATGCACATGGCAGCACCCCGCTACGACATG...CCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR GCA 90 bp GATGCGGTCGCAGCCCCTCACCACCGAGTAGGAATAGTGGTAGTAGCCTCCTCCTCTGGTCGTAGACCTTaGGAAGCGCTGGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: DAVAAPHHRVGIVVVASSSGRRP*EALGPS
Trigger: AGATGGCCCCAGCGCTTCGCAAGGTCTACGACCAGA...GGAGGAGGCTACTACCACTATTCCTACTCGGTGGTGAGGGGCTGCGACCGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR GCA 90 bp GGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGTCTGGTCGTAGACCTTaGGAAGCGCTGGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: GRFIDNLTGHKQAGDRTASGRRP*EALGPS
Trigger: AGATGGCCCCAGCGCTTCGCAAGGTCTACGACCAGA...CGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
CDS-3UTR GCA 90 bp GCGCTCCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGGGTCTTGGTATTTCTAACTaGAGGTCTTTGGTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: ALRVGPSIGWGSPPSAGGLGISN*RSLVCA
Trigger: GGCACAAACCAAAGACCTGCAGTTAGAAATACCAAG...ACCCCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCGGAGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR GCA 90 bp TTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCCCAGGGAGTCCTGCGTaGCCTTCTGTAAGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: FIDNLTGHKQAGDRTATGPGSPA*PSVRLR
Trigger: CCTCAGCCTTACAGAAGGGCACGCAGGACTCCCTGG...GCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR CCA 90 bp TTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTGCTTGGGCCATCGGTaGCCACGCTCTGATGGACAC +
Preference number: 4 (lower is better)
Translates to: FIDNLTGHKQAGDRTATGCLGHR*PRSDGH
Trigger: GTGTCCATCAGAGCGTGGCCACCGATGGCCCAAGCA...GCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp TTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCCGAGGTCATCCAGCTTaGCCACCACATACTCGCCCC +
Preference number: 4 (lower is better)
Translates to: FIDNLTGHKQAGDRTATGRGHPA*PPHTRP
Trigger: GGGGCGAGTATGTGGTGGCCAAGCTGGATGACCTCG...GCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp GGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGAGTAGCCTCCTCCGTTaGCGCAGCTCCCCATGGAGA +
Preference number: 4 (lower is better)
Translates to: GLLTTSRDTSRLGTGRRQSSLLR*RSSPWR
Trigger: TCTCCATGGGGAGCTGCGCCAACGGAGGAGGCTACT...CTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CCA 90 bp AGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCACCTGGCAGAGCTCTaGCAAGTCCAGGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RAGLLTTSRDTSRLGTGRHLAEL*QVQAAP
Trigger: TGGAGCAGCCTGGACTTGCCAGAGCTCTGCCAGGTG...CCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
3UTR CAA 72 bp CTGCAAGGAGGGAGGAGTACAGTCCACACTCGCAACTaGCCCCATTGGTCTGCACTGCAGGGGAAGACGCCA +
Preference number: 4 (lower is better)
Translates to: LQGGRSTVHTRN*PHWSALQGKTP
Trigger: TGGCGTCTTCCCCTGCAGTGCAGACCAATGGGGCAAGTTGCGAGTGTGGACTGTACTCCTCCCTCCTTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR TCA 90 bp AGGGAAGCGGAATCCAAAGTCAGAGCCTGTTCCTCCACTTTTGAGAGGCACCAGGTCCCCTGTCCCACATaGGCGCCACCTCCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: REAESKVRACSSTFERHQVPCPT*APPPSL
Trigger: CAGGCTTGGAGGTGGCGCTCATGTGGGACAGGGGAC...CTGGTGCCTCTCAAAAGTGGAGGAACAGGCTCTGACTTTGGATTCCGCTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR TCA 90 bp CCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGCTGTTCCTCCACTTTTaGGAGGCACCAGGATGTGCC +
Preference number: 4 (lower is better)
Translates to: PEGRFIDNLTGHKQAGDRLFLHF*EAPGCA
Trigger: GGCACATCCTGGTGCCTCTCAAAAGTGGAGGAACAG...CCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR GCA 90 bp CCCCCAGGAACCTTCTCGCTTGGTATTTCTAACTGCAGGTCTTTGGTTTGTGCCGCAGGGCAGGCTGGGTaGTGCTTGGGCCATCGGTGG +
Preference number: 4 (lower is better)
Translates to: PPGTFSLGISNCRSLVCAAGQAG*CLGHRW
Trigger: CCACCGATGGCCCAAGCAGCACCCAGCCTGCCCTGC...GGCACAAACCAAAGACCTGCAGTTAGAAATACCAAGCGAGAAGGTTCCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR GCA 90 bp GGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGTCGTAGCGGGGTGCTaGCATGTGCATCATCTCCAC +
Preference number: 4 (lower is better)
Translates to: GLLTTSRDTSRLGTGRRQVVAGC*HVHHLH
Trigger: GTGGAGATGATGCACATGGCAGCACCCCGCTACGAC...CTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR GCA 90 bp CCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGAGTCGTAGCGGGGTGCTaGCATGTGCATCATCTCCAC +
Preference number: 4 (lower is better)
Translates to: PRAGLLTTSRDTSRLGTGVVAGC*HVHHLH
Trigger: GTGGAGATGATGCACATGGCAGCACCCCGCTACGAC...TCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR GCA 90 bp CACCACCGAGTAGGAATAGTGGTAGTAGCCTCCTCCGTTGGCGCAGCTCCCCATGTCGTAGCGGGGTGCTaGCATGTGCATCATCTCCAC +
Preference number: 4 (lower is better)
Translates to: HHRVGIVVVASSVGAAPHVVAGC*HVHHLH
Trigger: GTGGAGATGATGCACATGGCAGCACCCCGCTACGAC...ATGGGGAGCTGCGCCAACGGAGGAGGCTACTACCACTATTCCTACTCGGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR GCA 90 bp CCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGATCTGGTCGTAGACCTTaGGAAGCGCTGGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: PRAGLLTTSRDTSRLGTGSGRRP*EALGPS
Trigger: AGATGGCCCCAGCGCTTCGCAAGGTCTACGACCAGA...TCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
CDS-3UTR GCA 90 bp ACTGCTGTAAACCAGGCGTGTGTCAGGAATTCCACTCAGCTTCCCCTGCTCCCTCCCATTGGTCTGCACTaGAGGGGAAGACGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: TAVNQACVRNSTQLPLLPPIGLH*RGRRQG
Trigger: CCCCTGGCGTCTTCCCCTGCAGTGCAGACCAATGGG...AGGGAGCAGGGGAAGCTGAGTGGAATTCCTGACACACGCCTGGTTTACAGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR GCA 90 bp TGCAAGGAGGGAGGAGTACAGTCCACACTCGCAACTTGCCCCATTGGTCTGCACCAAGCCAGAGCTCTTTaGTGGGGATCCCCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: CKEGGVQSTLATCPIGLHQARAL*WGSPSP
Trigger: GGGACTGGGGGATCCCCAGCAAAGAGCTCTGGCTTG...GTGCAGACCAATGGGGCAAGTTGCGAGTGTGGACTGTACTCCTCCCTCCTTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR CCA 90 bp CCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGAGACCTTGCGAAGCGCTaGGGCCATCTTGTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: PRAGLLTTSRDTSRLGTGDLAKR*GHLVGE
Trigger: CTCACCAACAAGATGGCCCCAGCGCTTCGCAAGGTC...TCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
CDS-3UTR CCA 90 bp CCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGCAAGCCTGCCTACCGTaGACCACTGTCAAGGTGAAC +
Preference number: 4 (lower is better)
Translates to: PEGRFIDNLTGHKQAGDRQACLP*TTVKVN
Trigger: GTTCACCTTGACAGTGGTCCACGGTAGGCAGGCTTG...CCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR TCA 90 bp GGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGCGAGGGCAGGTTTATTaGCAACCTCACGGGACACAA +
Preference number: 4 (lower is better)
Translates to: GRFIDNLTGHKQAGDRTARGQVY*QPHGTQ
Trigger: TTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCG...CGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR GCA 90 bp GGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGCATGTCGTAGCGGGGTaGTGCCATGTGCATCATCTC +
Preference number: 4 (lower is better)
Translates to: GLLTTSRDTSRLGTGRRQHVVAG*CHVHHL
Trigger: GAGATGATGCACATGGCAGCACCCCGCTACGACATG...CTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR GCA 90 bp AGGGAAGCGGAATCCAAAGTCAGAGCCTGTTCCTCCACTTTTGAGAGGCACCAGCTGCGGTACCAGATCTaGAGCCTCCGCTCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: REAESKVRACSSTFERHQLRYQI*SLRSRL
Trigger: CAAGCGGGAGCGGAGGCTGCAGATCTGGTACCGCAG...CTGGTGCCTCTCAAAAGTGGAGGAACAGGCTCTGACTTTGGATTCCGCTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR GCA 90 bp ACTGCTGTAAACCAGGCGTGTGTCAGGAATTCCACTCAGCTTCCCCTGCTCCCTTCCCCCAGTCCCGGCTaGCACGCAGGTTCAGAACAA +
Preference number: 4 (lower is better)
Translates to: TAVNQACVRNSTQLPLLPSPSPG*HAGSEQ
Trigger: TTGTTCTGAACCTGCGTGGCAGCCGGGACTGGGGGA...AGGGAGCAGGGGAAGCTGAGTGGAATTCCTGACACACGCCTGGTTTACAGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR CCA 90 bp AATCAACGCCCTTTCCAGGGAAGCGGAATCCAAAGTCAGAGCCTGTTCCTCCACGGTCCCGGCCCTACCTaGGATGTAGATGTCCACGGG +
Preference number: 4 (lower is better)
Translates to: NQRPFQGSGIQSQSLFLHGPGPT*DVDVHG
Trigger: CCCGTGGACATCTACATCCCAGGTAGGGCCGGGACC...GTGGAGGAACAGGCTCTGACTTTGGATTCCGCTTCCCTGGAAAGGGCGTTGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR CCA 90 bp TTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTAGACTTGCGAAGCGCTaGGGCCATCTTGTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: LLTTSRDTSRLGTGRRQARLAKR*GHLVGE
Trigger: CTCACCAACAAGATGGCCCCAGCGCTTCGCAAGTCT...AGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620479.4
CDS-3UTR TCA 90 bp AGCCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACACGAGGGCAGGTTTATTaGCAACCTCACGGGACACAA +
Preference number: 4 (lower is better)
Translates to: SPRAGLLTTSRDTSRLGTRGQVY*QPHGTQ
Trigger: TTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCG...TGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR TCA 90 bp CAGCCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAACCGTGCAGAACGCTaGACAAATCAACGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: QPEGRFIDNLTGHKQAGDNRAER*TNQRPF
Trigger: GAAAGGGCGTTGATTTGTTCAGCGTTCTGCACGGTT...GTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR GCA 90 bp TGCAGAACGCTGAACAAATCAACGCCCTTTCCAGGGAAGCGGAATCCAAAGTCATGGGCAAGGCCCCACTaGCCTCCACCCGTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: CRTLNKSTPFPGKRNPKSWARPH*PPPVAH
Trigger: ATGAGCCACGGGTGGAGGGCAGTGGGGCCTTGCCCA...TGACTTTGGATTCCGCTTCCCTGGAAAGGGCGTTGATTTGTTCAGCGTTCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313408.11
3UTR CAA 72 bp AACCTCACAGTCAAACTAAGCCTCCCACGTTTTCATTaGCCAAATCCGGCCACCCCGGGTCCCAGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: NLTVKLSLPRFH*PNPATPGPRES
Trigger: GGACTCCCTGGGACCCGGGGTGGCCGGATTTGGCAAATGAAAACGTGGGAGGCTTAGTTTGACTGTGAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR TCA 90 bp AGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAAGGAGTGGAAACAGGTaGGAAAGGACAAGGCCACTG +
Preference number: 4 (lower is better)
Translates to: RFIDNLTGHKQAGDRTATRSGNR*ERTRPL
Trigger: CAGTGGCCTTGTCCTTTCTCACCTGTTTCCACTCCT...TGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR GCA 90 bp GGGCTCTCTGCGCATGAGCTAATGCCGCACGCAGCACAGGGTGGCCAAGAACAGCAGGTCTTTGGTTTGTaGCAGGTAGGACCATATGAA +
Preference number: 4 (lower is better)
Translates to: GLSAHELMPHAAQGGQEQQVFGL*QVGPYE
Trigger: TTCATATGGTCCTACCTGGCACAAACCAAAGACCTG...CTGTTCTTGGCCACCCTGTGCTGCGTGCGGCATTAGCTCATGCGCAGAGAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR GCA 90 bp AGGGAAGCGGAATCCAAAGTCAGAGCCTGTTCCTCCACTTTTGAGAGGCACCAGTGGGACCACGTGAGGTaGAAGAGTCCCACGGGATCA +
Preference number: 4 (lower is better)
Translates to: REAESKVRACSSTFERHQWDHVR*KSPTGS
Trigger: TGATCCCGTGGGACTCTTGCACCTCACGTGGTCCCA...CTGGTGCCTCTCAAAAGTGGAGGAACAGGCTCTGACTTTGGATTCCGCTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR CCA 90 bp AGCCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACACTAACTGCAGGTCTTTaGTTTGTGCCAGGTAGGACC +
Preference number: 4 (lower is better)
Translates to: SPRAGLLTTSRDTSRLGTLTAGL*FVPGRT
Trigger: GGTCCTACCTGGCACAAACCAAAGACCTGCAGTTAG...TGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR GCA 90 bp CCCCCAGGAACCTTCTCGCTTGGTATTTCTAACTGCAGGTCTTTGGTTTGTGCCGGATGGACCTCTCTGTaGTGTCAAGTCACAGGGAGG +
Preference number: 4 (lower is better)
Translates to: PPGTFSLGISNCRSLVCAGWTSL*CQVTGR
Trigger: CCTCCCTGTGACTTGACAGCACAGAGAGGTCCATCC...GGCACAAACCAAAGACCTGCAGTTAGAAATACCAAGCGAGAAGGTTCCTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR GCA 90 bp TGCAGAACGCTGAACAAATCAACGCCCTTTCCAGGGAAGCGGAATCCAAAGTCATCCCACGTTTTCATTTaGCAAATCCGGCCACCCCGG +
Preference number: 4 (lower is better)
Translates to: CRTLNKSTPFPGKRNPKSSHVFI*QIRPPR
Trigger: CCGGGGTGGCCGGATTTGGCAAATGAAAACGTGGGA...TGACTTTGGATTCCGCTTCCCTGGAAAGGGCGTTGATTTGTTCAGCGTTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS CCA 90 bp GGGTGTGGGACTCCCTCACAGGGGCCGCCGGGCTCCGTGTGGCGCTaGCCCTGTCTCCAGCTCCCTCGTGGGCGGTGCGGTCCCGGCCCT +
Preference number: 5 (lower is better)
Translates to: GCGTPSQGPPGSVWR*PCLQLPRGRCGPGP
Trigger: AGGGCCGGGACCGCACCGCCCACGAGGGAGCTGGAGACAGGGCCAGCGCCACACGGAGCCCGGCGGCCCCTGTGAGGGAGTCCCACACCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000436115.6
ENST00000535382.1
ENST00000538523.5
ENST00000538662.5
ENST00000543289.5
ENST00000545446.5
ENST00000546283.5
ENST00000591358.1
CDS CCA 90 bp TGCTGGGGGTGTGGGACTCCCTCACAGGGGCCGCCGGGCTCCGTGTaGCGCTGGCCCTGTCTCCAGCTCCCTCGTGGGCGGTGCGGTCCC +
Preference number: 5 (lower is better)
Translates to: CWGCGTPSQGPPGSV*RWPCLQLPRGRCGP
Trigger: GGGACCGCACCGCCCACGAGGGAGCTGGAGACAGGGCCAGCGCCACACGGAGCCCGGCGGCCCCTGTGAGGGAGTCCCACACCCCCAGCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000436115.6
ENST00000535382.1
ENST00000538523.5
ENST00000538662.5
ENST00000543289.5
ENST00000545446.5
ENST00000546283.5
ENST00000591358.1
CDS GCA 90 bp ACGGCGCAGCAGGCCAGGCCGAAGGTCATGGGCCACAGAGAACTCTaGGGAGGCCGGGCTCGGGTCAGACGCCACCCCCGGAGCCCCGCG +
Preference number: 5 (lower is better)
Translates to: TAQQARPKVMGHREL*GGRARVRRHPRSPA
Trigger: CGCGGGGCTCCGGGGGTGGCGTCTGACCCGAGCCCGGCCTCCGCAGAGTTCTCTGTGGCCCATGACCTTCGGCCTGGCCTGCTGCGCCGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436115.6
CDS-3UTR CAA 90 bp GGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACAGCGCTGGGGCCATCTaGTTGGTGAGTGTGCCGGCC +
Preference number: 5 (lower is better)
Translates to: GQDGDRLRRRRRRRYLRYSAGAI*LVSVPA
Trigger: GGCCGGCACACTCACCAACAAGATGGCCCCAGCGCT...GTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
CDS GCA 90 bp CGGGCACAGGAGGCGTCAGCCACGCAGGTGCTTCCCAGAGGCGGATaGGAGCCCCCACGGCCGCTGCCAGAGGCCTGCTTGGGCCATCGG +
Preference number: 5 (lower is better)
Translates to: RAQEASATQVLPRGG*EPPRPLPEACLGHR
Trigger: CCGATGGCCCAAGCAGGCCTCTGGCAGCGGCCGTGGGGGCTCGCATCCGCCTCTGGGAAGCACCTGCGTGGCTGACGCCTCCTGTGCCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414651.3
CDS GCA 90 bp CGCTCCGGGTTCCCGGGGCCGCCGCCCAAAGCGGCTCGGAGCGCATaGGGAAACCGGAACCTGGAGCCGGGAGGTTCCGCTGCGCTTTCG +
Preference number: 5 (lower is better)
Translates to: RSGFPGPPPKAARSA*GNRNLEPGGSAALS
Trigger: CGAAAGCGCAGCGGAACCTCCCGGCTCCAGGTTCCGGTTTCCGCATGCGCTCCGAGCCGCTTTGGGCGGCGGCCCCGGGAACCCGGAGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546283.5
CDS CCA 90 bp GCCGCCGGGCTCCGTGTGGCGCTGGCCCTGTCTCCAGCTCCCTCGTaGGCGGTGCGGTCCCGGCCCTACCTGGGATGTAGATGTCCACGG +
Preference number: 5 (lower is better)
Translates to: AAGLRVALALSPAPS*AVRSRPYLGCRCPR
Trigger: CCGTGGACATCTACATCCCAGGTAGGGCCGGGACCGCACCGCCCACGAGGGAGCTGGAGACAGGGCCAGCGCCACACGGAGCCCGGCGGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000436115.6
ENST00000535382.1
ENST00000538523.5
ENST00000538662.5
ENST00000543289.5
ENST00000545446.5
ENST00000546283.5
ENST00000591358.1
CDS-3UTR CAA 90 bp ACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCACTCCGGCGGGCCCAGTaGACGAGGTCATCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: TGRRQAPAAAAAALPAVPLRRAQ*TRSSSL
Trigger: CAAGCTGGATGACCTCGTCAACTGGGCCCGCCGGAG...TGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
CDS-3UTR CAA 90 bp GGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCAGCCTCCGCTCCCAGCGCTGGGGCCATCTaGTTGGTGAGTGTGCCGGCC +
Preference number: 5 (lower is better)
Translates to: GGGGGGATCGTRSAASAPSAGAI*LVSVPA
Trigger: GGCCGGCACACTCACCAACAAGATGGCCCCAGCGCT...GGGAGCGGAGGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
CDS-3UTR CAA 90 bp GACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGAGCGCTGGGGCCATCTaGTTGGTGAGTGTGCCGGCC +
Preference number: 5 (lower is better)
Translates to: DTSRLGTGRRQAPAAAAASAGAI*LVSVPA
Trigger: GGCCGGCACACTCACCAACAAGATGGCCCCAGCGCT...CGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CAA 90 bp GGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCCAAGCCAGAGCTCTTaGCTGGGGATCCCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: GQDGDRLRRRRRRRYLRYPSQSS*LGIPQS
Trigger: GGACTGGGGGATCCCCAGCAAAGAGCTCTGGCTTGG...GTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGTCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR CAA 90 bp GGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCAGCCTCCGCTCCCCAGCCTGCAGGGACCTaGCCTCAGTCTCGCTTCCCG +
Preference number: 5 (lower is better)
Translates to: GGGGGGATCGTRSAASAPQPAGT*PQSRFP
Trigger: CGGGAAGCGAGACTGAGGCAAGGTCCCTGCAGGCTG...GGGAGCGGAGGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS GCA 90 bp CGGCTCCGGCATCTGGTCGTAGACCTGGAAGAGAGGCGGGGTCCGTaGGCAGCTCACTCTGGGGGCGGCTGGGCGGCTGGGACGAGGCCT +
Preference number: 5 (lower is better)
Translates to: RLRHLVVDLEERRGP*AAHSGGGWAAGTRP
Trigger: AGGCCTCGTCCCAGCCGCCCAGCCGCCCCCAGAGTGAGCTGCGCACGGACCCCGCCTCTCTTCCAGGTCTACGACCAGATGCCGGAGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538662.5
ENST00000543289.5
ENST00000622587.4
CDS GCA 90 bp CGGGCACAGGAGGCGTCAGCCACGCAGGTGCTTCCCAGAGGCGGATaGGAGCCCCCACGGCCGCTGCCAGAGGCCTGGACCCACATGAGG +
Preference number: 5 (lower is better)
Translates to: RAQEASATQVLPRGG*EPPRPLPEAWTHMR
Trigger: CCTCATGTGGGTCCAGGCCTCTGGCAGCGGCCGTGGGGGCTCGCATCCGCCTCTGGGAAGCACCTGCGTGGCTGACGCCTCCTGTGCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000543289.5
ENST00000545446.5
CDS GCA 90 bp CTCCTCCGTTGGCGCAGCTGTTGGGGAGGCACCGTGAGGGGAGTGTaGCGAAGACCCGCCTGCCCACCCTCCCTCCACGAGGCCTCGCCC +
Preference number: 5 (lower is better)
Translates to: LLRWRSCWGGTVRGV*RRPACPPSLHEASP
Trigger: GGGCGAGGCCTCGTGGAGGGAGGGTGGGCAGGCGGGTCTTCGGCACACTCCCCTCACGGTGCCTCCCCAACAGCTGCGCCAACGGAGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591358.1
CDS-3UTR CAA 90 bp CACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCACGAGGTCATCCAGCTaGGCCACCACATACTCGCCC +
Preference number: 5 (lower is better)
Translates to: HKQAGDRTATGSGGGGGGTRSSS*ATTYSP
Trigger: GGGCGAGTATGTGGTGGCCAAGCTGGATGACCTCGT...GCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CAA 90 bp GGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCAGCCTCCGCTCCCGCTCTCCGGCGGGCCCAGTaGACGAGGTCATCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: GGGGGATCGTRSAASAPALRRAQ*TRSSSL
Trigger: CAAGCTGGATGACCTCGTCAACTGGGCCCGCCGGAG...AGCGGGAGCGGAGGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
CDS-3UTR CAA 90 bp GCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCACTCCGGCGGGCCCAGTaGACGAGGTCATCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: ATGSGGGGGGATCGTRSALRRAQ*TRSSSL
Trigger: CAAGCTGGATGACCTCGTCAACTGGGCCCGCCGGAG...TGCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
CDS-3UTR CAA 90 bp ACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGGATGTGCCTCTCGCTaGCCCAAACCCCCAGACTCG +
Preference number: 5 (lower is better)
Translates to: TGRRQAPAAAAAALPAVPGCASR*PKPPDS
Trigger: CGAGTCTGGGGGTTTGGGCAAGCGAGAGGCACATCC...TGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR CAA 90 bp CGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCAGCCTCCGCTCCCCAAGCCAGAGCTCTTaGCTGGGGATCCCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: RRRRRRRYLRYQICSLRSPSQSS*LGIPQS
Trigger: GGACTGGGGGATCCCCAGCAAAGAGCTCTGGCTTGG...GGAGCGGAGGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR CAA 90 bp ACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCAGCCGGCTCGGCTTaGGAAGGGTTTCCCGGGCCG +
Preference number: 5 (lower is better)
Translates to: TSRDTSRLGTGRRQAPAAAAGSA*EGFPGP
Trigger: CGGCCCGGGAAACCCTTCCAAAGCCGAGCCGGCTGC...CGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS TCA 90 bp GGCAGGGCAGGCTGGGTGCTGCTTGGGCCATCGGTGGCCACGCTCTaGTGGACACCTCGTGCCTGCACAGCCGGGCCCACGCTGGAGCCA +
Preference number: 5 (lower is better)
Translates to: GRAGWVLLGPSVATL*WTPRACTAGPTLEP
Trigger: TGGCTCCAGCGTGGGCCCGGCTGTGCAGGCACGAGGTGTCCATCAGAGCGTGGCCACCGATGGCCCAAGCAGCACCCAGCCTGCCCTGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535382.1
CDS GCA 90 bp GCTGGCACAGAGACACACGGGCACAGGAGGCGTCAGCCACGCAGGTaGTTCCCAGAGGCGGATGCGAGCCCCCACGGCCGCTGCCAGAGG +
Preference number: 5 (lower is better)
Translates to: AGTETHGHRRRQPRR*FPEADASPHGRCQR
Trigger: CCTCTGGCAGCGGCCGTGGGGGCTCGCATCCGCCTCTGGGAAGCACCTGCGTGGCTGACGCCTCCTGTGCCCGTGTGTCTCTGTGCCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414651.3
ENST00000543289.5
ENST00000545446.5
CDS CCA 90 bp GGTCGTAGACCTGGAAGAGAGGCGGGGTCCGTGCGCAGCTCACTCTaGGGGCGGCTGGGCGGCTGGGACGAGGCCTACCTTGCGAAGCGC +
Preference number: 5 (lower is better)
Translates to: GRRPGREAGSVRSSL*GRLGGWDEAYLAKR
Trigger: GCGCTTCGCAAGGTAGGCCTCGTCCCAGCCGCCCAGCCGCCCCCAGAGTGAGCTGCGCACGGACCCCGCCTCTCTTCCAGGTCTACGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538662.5
ENST00000543289.5
ENST00000622587.4
CDS CCA 90 bp GGCCGCCGCCCAAAGCGGCTCGGAGCGCATGCGGAAACCGGAACCTaGAGCCGGGAGGTTCCGCTGCGCTTTCGGCCTCCGTGGTCGTGT +
Preference number: 5 (lower is better)
Translates to: GRRPKRLGAHAETGT*SREVPLRFRPPWSC
Trigger: ACACGACCACGGAGGCCGAAAGCGCAGCGGAACCTCCCGGCTCCAGGTTCCGGTTTCCGCATGCGCTCCGAGCCGCTTTGGGCGGCGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546283.5
CDS-3UTR CAA 90 bp CAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCAGGCTGGGTGCTGCTaGGGCCATCGGTGGCCACGC +
Preference number: 5 (lower is better)
Translates to: QPHGTQAGWGQDGDRLRRQAGCC*GHRWPR
Trigger: GCGTGGCCACCGATGGCCCAAGCAGCACCCAGCCTG...CCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CAA 90 bp AACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCCAGGCTGGGTGCTGCTaGGGCCATCGGTGGCCACGC +
Preference number: 5 (lower is better)
Translates to: NLTGHKQAGDRTATGSGGQAGCC*GHRWPR
Trigger: GCGTGGCCACCGATGGCCCAAGCAGCACCCAGCCTG...GCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CAA 90 bp GGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATACGAGGTCATCCAGCTaGGCCACCACATACTCGCCC +
Preference number: 5 (lower is better)
Translates to: GRRQAPAAAAAALPAVPDTRSSS*ATTYSP
Trigger: GGGCGAGTATGTGGTGGCCAAGCTGGATGACCTCGT...ATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
CDS GCA 90 bp GGCTCCGTGTGGCGCTGGCCCTGTCTCCAGCTCCCTCGTGGGCGGTaGGGTCCCGGCCCTACCTGGGATGTAGATGTCCACGGGCACGAT +
Preference number: 5 (lower is better)
Translates to: GSVWRWPCLQLPRGR*GPGPTWDVDVHGHD
Trigger: ATCGTGCCCGTGGACATCTACATCCCAGGTAGGGCCGGGACCGCACCGCCCACGAGGGAGCTGGAGACAGGGCCAGCGCCACACGGAGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000436115.6
ENST00000535382.1
ENST00000538523.5
ENST00000538662.5
ENST00000543289.5
ENST00000545446.5
ENST00000546283.5
ENST00000591358.1
CDS CCA 90 bp CCCTGTCTCCAGCTCCCTCGTGGGCGGTGCGGTCCCGGCCCTACCTaGGATGTAGATGTCCACGGGCACGATGCGGTCGCAGCCCCTCAC +
Preference number: 5 (lower is better)
Translates to: PCLQLPRGRCGPGPT*DVDVHGHDAVAAPH
Trigger: GTGAGGGGCTGCGACCGCATCGTGCCCGTGGACATCTACATCCCAGGTAGGGCCGGGACCGCACCGCCCACGAGGGAGCTGGAGACAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000436115.6
ENST00000535382.1
ENST00000538523.5
ENST00000538662.5
ENST00000543289.5
ENST00000545446.5
ENST00000546283.5
ENST00000591358.1
CDS-3UTR CAA 90 bp GGCCAGGCCGAAGGTCATGGGCCACAGAGAACTCCGGCGGGCCCAGTTGACGAGCAGGCTGGGTGCTGCTaGGGCCATCGGTGGCCACGC +
Preference number: 5 (lower is better)
Translates to: GQAEGHGPQRTPAGPVDEQAGCC*GHRWPR
Trigger: GCGTGGCCACCGATGGCCCAAGCAGCACCCAGCCTG...CTCGTCAACTGGGCCCGCCGGAGTTCTCTGTGGCCCATGACCTTCGGCCTGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR CAA 90 bp GCGCTCCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGGGTCTCCGGCGGGCCCAGTaGACGAGGTCATCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: ALRVGPSIGWGSPPSAGGLRRAQ*TRSSSL
Trigger: CAAGCTGGATGACCTCGTCAACTGGGCCCGCCGGAG...ACCCCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCGGAGCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CAA 90 bp ACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCTGGGGCCATCTTGTaGGTGAGTGTGCCGGCCACG +
Preference number: 5 (lower is better)
Translates to: TSRDTSRLGTGRRQAPAAAGAIL*VSVPAT
Trigger: CGTGGCCGGCACACTCACCAACAAGATGGCCCCAGC...CGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CAA 90 bp GGCGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCAGCCTCCGCTCCCGCTGACAGCACCGCCATCTaGGCCTCGGCCTTCAGACAA +
Preference number: 5 (lower is better)
Translates to: GGGGGATCGTRSAASAPADSTAI*ASAFRQ
Trigger: TTGTCTGAAGGCCGAGGCCAAGATGGCGGTGCTGTC...AGCGGGAGCGGAGGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS TCA 90 bp CCAGAAGGCCAGCTTCACCTGCTTGGGCCATCGGTGGCCACGCTCTaGTGGACACCTCGTGCCTGCACAGCCGGGCCCACGCTGGAGCGC +
Preference number: 5 (lower is better)
Translates to: PEGQLHLLGPSVATL*WTPRACTAGPTLER
Trigger: GCGCTCCAGCGTGGGCCCGGCTGTGCAGGCACGAGGTGTCCATCAGAGCGTGGCCACCGATGGCCCAAGCAGGTGAAGCTGGCCTTCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543289.5
ENST00000545446.5
CDS TCA 90 bp GTGGTAGTAGCCTCCTCCGTTGGCGCAGCTGTTGGGGAGGCACCGTaGGGGGAGTGTGCCGAAGACCCGCCTGCCCACCCTCCCTCCACG +
Preference number: 5 (lower is better)
Translates to: VVVASSVGAAVGEAP*GECAEDPPAHPPST
Trigger: CGTGGAGGGAGGGTGGGCAGGCGGGTCTTCGGCACACTCCCCTCACGGTGCCTCCCCAACAGCTGCGCCAACGGAGGAGGCTACTACCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591358.1
CDS GCA 90 bp AGGCCTGCTTGGGCCATCGGTGGCCACGCTCTGATGGACACCTCGTaGCTGCACAGCCGGGCCCACGCTGGAGCGCAGACCAAGGATCCG +
Preference number: 5 (lower is better)
Translates to: RPAWAIGGHALMDTS*LHSRAHAGAQTKDP
Trigger: CGGATCCTTGGTCTGCGCTCCAGCGTGGGCCCGGCTGTGCAGGCACGAGGTGTCCATCAGAGCGTGGCCACCGATGGCCCAAGCAGGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414651.3
CDS GCA 90 bp TCGGAGCGCATGCGGAAACCGGAACCTGGAGCCGGGAGGTTCCGCTaGGCTTTCGGCCTCCGTGGTCGTGTTGCGCCGTGCACCCCCAGA +
Preference number: 5 (lower is better)
Translates to: SERMRKPEPGAGRFR*AFGLRGRVAPCTPR
Trigger: TCTGGGGGTGCACGGCGCAACACGACCACGGAGGCCGAAAGCGCAGCGGAACCTCCCGGCTCCAGGTTCCGGTTTCCGCATGCGCTCCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546283.5
CDS CCA 90 bp CTTCCCAGAGGCGGATGCGAGCCCCCACGGCCGCTGCCAGAGGCCTaGACCCACATGAGGTCAGGGACTGGGATGTGTGACCCCCTCCCT +
Preference number: 5 (lower is better)
Translates to: LPRGGCEPPRPLPEA*THMRSGTGMCDPLP
Trigger: AGGGAGGGGGTCACACATCCCAGTCCCTGACCTCATGTGGGTCCAGGCCTCTGGCAGCGGCCGTGGGGGCTCGCATCCGCCTCTGGGAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000539882.1
ENST00000543289.5
ENST00000545446.5
CDS CCA 90 bp ACCGGAACCTGGAGCCGGGAGGTTCCGCTGCGCTTTCGGCCTCCGTaGTCGTGTTGCGCCGTGCACCCCCAGATCACCCGAGGCGGAAAG +
Preference number: 5 (lower is better)
Translates to: TGTWSREVPLRFRPP*SCCAVHPQITRGGK
Trigger: CTTTCCGCCTCGGGTGATCTGGGGGTGCACGGCGCAACACGACCACGGAGGCCGAAAGCGCAGCGGAACCTCCCGGCTCCAGGTTCCGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546283.5
CDS-3UTR CAA 90 bp CGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCAGCCTCCGCTCCCGCTTGACGAGGTCATCCAGCTaGGCCACCACATACTCGCCC +
Preference number: 5 (lower is better)
Translates to: RRRRRYLRYQICSLRSRLTRSSS*ATTYSP
Trigger: GGGCGAGTATGTGGTGGCCAAGCTGGATGACCTCGT...CAAGCGGGAGCGGAGGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
CDS-3UTR CAA 90 bp CAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGGCTGGGGCCATCTTGTaGGTGAGTGTGCCGGCCACG +
Preference number: 5 (lower is better)
Translates to: QPHGTQAGWGQDGDRLRRAGAIL*VSVPAT
Trigger: CGTGGCCGGCACACTCACCAACAAGATGGCCCCAGC...CCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CAA 90 bp GAGGCAGCGCTCCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGCTGGGGCCATCTTGTaGGTGAGTGTGCCGGCCACG +
Preference number: 5 (lower is better)
Translates to: EAALRVGPSIGWGSPPSAAGAIL*VSVPAT
Trigger: CGTGGCCGGCACACTCACCAACAAGATGGCCCCAGC...AGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACTCGGAGCGCTGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CAA 90 bp AACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCAGCGCTGGGGCCATCTaGTTGGTGAGTGTGCCGGCC +
Preference number: 5 (lower is better)
Translates to: NLTGHKQAGDRTATGSGGSAGAI*LVSVPA
Trigger: GGCCGGCACACTCACCAACAAGATGGCCCCAGCGCT...GCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CAA 90 bp GACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCGGCGGCGCCGAGGGCAGGTTTATaGACAACCTCACGGGACACA +
Preference number: 5 (lower is better)
Translates to: DTSRLGTGRRQAPAAAAAPRAGL*TTSRDT
Trigger: TGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGG...CGCCGCCGCCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CAA 90 bp CGGCGGCGGCGGCGCTACCTGCGGTACCAGATCTGCAGCCTCCGCTCCCGCTTGGACAGCACCGCCATCTaGGCCTCGGCCTTCAGACAA +
Preference number: 5 (lower is better)
Translates to: RRRRRYLRYQICSLRSRLDSTAI*ASAFRQ
Trigger: TTGTCTGAAGGCCGAGGCCAAGATGGCGGTGCTGTC...CAAGCGGGAGCGGAGGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGCCGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR CAA 90 bp AGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGGGTGTGGGACTGCCTCCGTGGTCGTGTaGCGCCGTGCACCCCCAGAT +
Preference number: 5 (lower is better)
Translates to: SRPIHRMGEPAVCWGCGTASVVV*RRAPPD
Trigger: ATCTGGGGGTGCACGGCGCAACACGACCACGGAGGC...AGTCCCACACCCCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000546283.5
CDS TCA 90 bp CCAGAAGGCCAGCTTCACCTGCTTGGGCCATCGGTGGCCACGCTCTaGTGGACACCTCGTGCCTGCACAGCCGGGCCCACGCTGGAGCCA +
Preference number: 5 (lower is better)
Translates to: PEGQLHLLGPSVATL*WTPRACTAGPTLEP
Trigger: TGGCTCCAGCGTGGGCCCGGCTGTGCAGGCACGAGGTGTCCATCAGAGCGTGGCCACCGATGGCCCAAGCAGGTGAAGCTGGCCTTCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539882.1
CDS TCA 90 bp GAGCTGACAGCACCGCCATCTTGGCCTCGGCCTTCAGACAACCTCTaGGGTCCGTTCTCCTTAGCGCTCCGGGTTCCCGGGGCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: ELTAPPSWPRPSDNL*GPFSLALRVPGAAA
Trigger: GGCGGCGGCCCCGGGAACCCGGAGCGCTAAGGAGAACGGACCTCAGAGGTTGTCTGAAGGCCGAGGCCAAGATGGCGGTGCTGTCAGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546283.5
CDS GCA 90 bp TCACCTGCTTGGGCCATCGGTGGCCACGCTCTGATGGACACCTCGTaGCTGCACAGCCGGGCCCACGCTGGAGCGCAGACCAAGGATCCG +
Preference number: 5 (lower is better)
Translates to: SPAWAIGGHALMDTS*LHSRAHAGAQTKDP
Trigger: CGGATCCTTGGTCTGCGCTCCAGCGTGGGCCCGGCTGTGCAGGCACGAGGTGTCCATCAGAGCGTGGCCACCGATGGCCCAAGCAGGTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543289.5
ENST00000545446.5
CDS GCA 90 bp GGGAGGTTCCGCTGCGCTTTCGGCCTCCGTGGTCGTGTTGCGCCGTaGACCCCCAGATCACCCGAGGCGGAAAGGTCATCGGAGTGCGCA +
Preference number: 5 (lower is better)
Translates to: GRFRCAFGLRGRVAP*TPRSPEAERSSECA
Trigger: TGCGCACTCCGATGACCTTTCCGCCTCGGGTGATCTGGGGGTGCACGGCGCAACACGACCACGGAGGCCGAAAGCGCAGCGGAACCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546283.5
CDS GCA 90 bp TGGAGCCGGGAGGTTCCGCTGCGCTTTCGGCCTCCGTGGTCGTGTTaGGCCGTGCACCCCCAGATCACCCGAGGCGGAAAGGTCATCGGA +
Preference number: 5 (lower is better)
Translates to: WSREVPLRFRPPWSC*AVHPQITRGGKVIG
Trigger: TCCGATGACCTTTCCGCCTCGGGTGATCTGGGGGTGCACGGCGCAACACGACCACGGAGGCCGAAAGCGCAGCGGAACCTCCCGGCTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546283.5
CDS CCA 90 bp GTTTGGGAGCCACGGCTCTGGCCTTTGGCAGGGCAGGCTGGGTGCTaGCACAGAGACACACGGGCACAGGAGGCGTCAGCCACGCAGGTG +
Preference number: 5 (lower is better)
Translates to: VWEPRLWPLAGQAGC*HRDTRAQEASATQV
Trigger: CACCTGCGTGGCTGACGCCTCCTGTGCCCGTGTGTCTCTGTGCCAGCACCCAGCCTGCCCTGCCAAAGGCCAGAGCCGTGGCTCCCAAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414651.3
ENST00000543289.5
ENST00000545446.5
CDS CCA 90 bp CTGCTGGGTTTGGGAGCCACGGCTCTGGCCTTTGGCAGGGCAGGCTaGGTGCTGGCACAGAGACACACGGGCACAGGAGGCGTCAGCCAC +
Preference number: 5 (lower is better)
Translates to: LLGLGATALAFGRAG*VLAQRHTGTGGVSH
Trigger: GTGGCTGACGCCTCCTGTGCCCGTGTGTCTCTGTGCCAGCACCCAGCCTGCCCTGCCAAAGGCCAGAGCCGTGGCTCCCAAACCCAGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414651.3
ENST00000543289.5
ENST00000545446.5
CDS CCA 90 bp ATACTCGCCCCGGCTGCTGGGTTTGGGAGCCACGGCTCTGGCCTTTaGCAGGGCAGGCTGGGTGCTGGCACAGAGACACACGGGCACAGG +
Preference number: 5 (lower is better)
Translates to: ILAPAAGFGSHGSGL*QGRLGAGTETHGHR
Trigger: CCTGTGCCCGTGTGTCTCTGTGCCAGCACCCAGCCTGCCCTGCCAAAGGCCAGAGCCGTGGCTCCCAAACCCAGCAGCCGGGGCGAGTAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414651.3
ENST00000543289.5
ENST00000545446.5
CDS CCA 90 bp CCATGTGCATCATCTCCACGGCGCAGCAGGCCAGGCCGAAGGTCATaGGCCACAGAGAACTCTGCGGAGGCCGGGCTCGGGTCAGACGCC +
Preference number: 5 (lower is better)
Translates to: PCASSPRRSRPGRRS*ATENSAEAGLGSDA
Trigger: GGCGTCTGACCCGAGCCCGGCCTCCGCAGAGTTCTCTGTGGCCCATGACCTTCGGCCTGGCCTGCTGCGCCGTGGAGATGATGCACATGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436115.6
CDS CCA 90 bp TGGGGGCGGCTGGGCGGCTGGGACGAGGCCTACCTTGCGAAGCGCTaGGGCCATCTTGTTGGTGAGTGTGCCGGCCACGATCATGACGTC +
Preference number: 5 (lower is better)
Translates to: WGRLGGWDEAYLAKR*GHLVGECAGHDHDV
Trigger: GACGTCATGATCGTGGCCGGCACACTCACCAACAAGATGGCCCCAGCGCTTCGCAAGGTAGGCCTCGTCCCAGCCGCCCAGCCGCCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538662.5
ENST00000543289.5
ENST00000622587.4
CDS CCA 90 bp GGGCGAGGGGGTACGACCTCCCCCAGAAGGCCAGCTTCACCTGCTTaGGCCATCGGTGGCCACGCTCTGATGGACACCTCGTGCCTGCAC +
Preference number: 5 (lower is better)
Translates to: GRGGTTSPRRPASPA*AIGGHALMDTSCLH
Trigger: GTGCAGGCACGAGGTGTCCATCAGAGCGTGGCCACCGATGGCCCAAGCAGGTGAAGCTGGCCTTCTGGGGGAGGTCGTACCCCCTCGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000539882.1
ENST00000543289.5
ENST00000545446.5
CDS CCA 90 bp GCTGAGCCTCACCCTCGCCTGATTCCGGCTCTGTCAGTGAGGCGCTaGGGTCCACCCGGGGCAGGGAGCTGGAAACCCCAGGAGACCACA +
Preference number: 5 (lower is better)
Translates to: AEPHPRLIPALSVRR*GPPGAGSWKPQETT
Trigger: TGTGGTCTCCTGGGGTTTCCAGCTCCCTGCCCCGGGTGGACCCCAGCGCCTCACTGACAGAGCCGGAATCAGGCGAGGGTGAGGCTCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591358.1
CDS-3UTR CAA 90 bp AGTCGGCCCATCCATAGGATGGGGGAGCCCGCCGTCTGCTGGGGGTGTGGGACTAGCGCTGGGGCCATCTaGTTGGTGAGTGTGCCGGCC +
Preference number: 5 (lower is better)
Translates to: SRPIHRMGEPAVCWGCGTSAGAI*LVSVPA
Trigger: GGCCGGCACACTCACCAACAAGATGGCCCCAGCGCT...AGTCCCACACCCCCAGCAGACGGCGGGCTCCCCCATCCTATGGATGGGCCGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CAA 90 bp GACCGCGTGCACAGCGCAGCCGGCTCGGCTTTGGAAGGGTTTCCCGGGCCGGCCTCGCAACTTGCCCCATaGGTCTGCACTGCAGGGGAA +
Preference number: 5 (lower is better)
Translates to: DRVHSAAGSALEGFPGPASQLAP*VCTAGE
Trigger: TTCCCCTGCAGTGCAGACCAATGGGGCAAGTTGCGA...GGCCGGCCCGGGAAACCCTTCCAAAGCCGAGCCGGCTGCGCTGTGCACGCGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR CAA 90 bp CTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCGTCCACACTCGCAACTaGCCCCATTGGTCTGCACTG +
Preference number: 5 (lower is better)
Translates to: LTGHKQAGDRTATGSGGGVHTRN*PHWSAL
Trigger: CAGTGCAGACCAATGGGGCAAGTTGCGAGTGTGGAC...GCCGCCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS TCA 90 bp GCTGCCAGAGGCCTGGACCCACATGAGGTCAGGGACTGGGATGTGTaGCCCCCTCCCTGCCCCATCCATGCACCTCAGTGGCTGCGGCAC +
Preference number: 5 (lower is better)
Translates to: AARGLDPHEVRDWDV*PPPCPIHAPQWLRH
Trigger: GTGCCGCAGCCACTGAGGTGCATGGATGGGGCAGGGAGGGGGTCACACATCCCAGTCCCTGACCTCATGTGGGTCCAGGCCTCTGGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539882.1
ENST00000543289.5
ENST00000545446.5
CDS GCA 90 bp GATCCCTGGGCATGCGCCCTCACCGCCCTGTCAGTCACCTGGGTCTaGAGGAGGCCTGCCCCAGCTGCCATCTGCACAGGGCTCAGAGAA +
Preference number: 5 (lower is better)
Translates to: DPWACALTALSVTWV*RRPAPAAICTGLRE
Trigger: TTCTCTGAGCCCTGTGCAGATGGCAGCTGGGGCAGGCCTCCTGCAGACCCAGGTGACTGACAGGGCGGTGAGGGCGCATGCCCAGGGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535382.1
ENST00000539882.1
CDS CCA 90 bp TACGACCTCCCCCAGAAGGCCAGCTTCACCTGCTTGGGCCATCGGTaGCCACGCTCTGATGGACACCTCGTGCCTGCACAGCCGGGCCCA +
Preference number: 5 (lower is better)
Translates to: YDLPQKASFTCLGHR*PRSDGHLVPAQPGP
Trigger: TGGGCCCGGCTGTGCAGGCACGAGGTGTCCATCAGAGCGTGGCCACCGATGGCCCAAGCAGGTGAAGCTGGCCTTCTGGGGGAGGTCGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539882.1
ENST00000543289.5
ENST00000545446.5
CDS-3UTR CAA 90 bp TTCTCACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCATCCACAGGCTGGGTGCTGCTaGGGCCATCGGTGGCCACGC +
Preference number: 5 (lower is better)
Translates to: FSQGTGSTKRQRSESAHPQAGCC*GHRWPR
Trigger: GCGTGGCCACCGATGGCCCAAGCAGCACCCAGCCTG...TGGATGGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTGAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000546283.5
CDS-3UTR CAA 90 bp GCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGCTGGGGCCATCTTGTaGGTGAGTGTGCCGGCCACG +
Preference number: 5 (lower is better)
Translates to: APLRGSAPSRPIHRMGEPAGAIL*VSVPAT
Trigger: CGTGGCCGGCACACTCACCAACAAGATGGCCCCAGC...GGGCTCCCCCATCCTATGGATGGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CAA 90 bp CATCCCGGGCTGTCACAGGGACCTCTCGGACAAGACGCTGACCTCACTAACCCGGCAGCCGGCTCGGCTTaGGAAGGGTTTCCCGGGCCG +
Preference number: 5 (lower is better)
Translates to: HPGLSQGPLGQDADLTNPAAGSA*EGFPGP
Trigger: CGGCCCGGGAAACCCTTCCAAAGCCGAGCCGGCTGC...CGGGTTAGTGAGGTCAGCGTCTTGTCCGAGAGGTCCCTGTGACAGCCCGGGATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS-3UTR CAA 90 bp TTCTCACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCATCCACTGCCAGAGGCCTGCTaGGGCCATCGGTGGCCACGC +
Preference number: 5 (lower is better)
Translates to: FSQGTGSTKRQRSESAHPLPEAC*GHRWPR
Trigger: GCGTGGCCACCGATGGCCCAAGCAGGCCTCTGGCAG...TGGATGGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTGAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414651.3
CDS TCA 90 bp CAGACAGCCACAGTGCCAACACCCAGCCCCTGTCTATGGGGCGGCTaGGCCTCACCCTCGCCTGATTCCGGCTCTGTCAGTGAGGCGCTG +
Preference number: 5 (lower is better)
Translates to: QTATVPTPSPCLWGG*ASPSPDSGSVSEAL
Trigger: CAGCGCCTCACTGACAGAGCCGGAATCAGGCGAGGGTGAGGCTCAGCCGCCCCATAGACAGGGGCTGGGTGTTGGCACTGTGGCTGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591358.1
CDS GCA 90 bp CTGTCAGTCACCTGGGTCTGCAGGAGGCCTGCCCCAGCTGCCATCTaGACAGGGCTCAGAGAATGCCTTCCCACCCCAGGTGGCGGTGAG +
Preference number: 5 (lower is better)
Translates to: LSVTWVCRRPAPAAI*TGLRECLPTPGGGE
Trigger: CTCACCGCCACCTGGGGTGGGAAGGCATTCTCTGAGCCCTGTGCAGATGGCAGCTGGGGCAGGCCTCCTGCAGACCCAGGTGACTGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535382.1
ENST00000539882.1
CDS CCA 90 bp GACGGAAACGGAGGGGTCATCTCCAGCAGGGTCCGAATCCTCAGATaGAACCACAGGCCACCAGGCCAGCACAGGGGCCTCCGGGAGGGT +
Preference number: 5 (lower is better)
Translates to: DGNGGVISSRVRILR*NHRPPGQHRGLREG
Trigger: ACCCTCCCGGAGGCCCCTGTGCTGGCCTGGTGGCCTGTGGTTCCATCTGAGGATTCGGACCCTGCTGGAGATGACCCCTCCGTTTCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436115.6
CDS CCA 90 bp CACCCCCAGATCACCCGAGGCGGAAAGGTCATCGGAGTGCGCACGTaGGGGCCGCGGGTCTTTCGGTTAACAGCCGAACGCGCTAACCGA +
Preference number: 5 (lower is better)
Translates to: HPQITRGGKVIGVRT*GPRVFRLTAERANR
Trigger: TCGGTTAGCGCGTTCGGCTGTTAACCGAAAGACCCGCGGCCCCCACGTGCGCACTCCGATGACCTTTCCGCCTCGGGTGATCTGGGGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546283.5
CDS-3UTR CAA 90 bp GTCGCAGCCCCTCACCACCGAGTAGGAATAGTGGTAGTAGCCTCCTCCGTTGGCCAGGCTGGGTGCTGCTaGGGCCATCGGTGGCCACGC +
Preference number: 5 (lower is better)
Translates to: VAAPHHRVGIVVVASSVGQAGCC*GHRWPR
Trigger: GCGTGGCCACCGATGGCCCAAGCAGCACCCAGCCTG...GCCAACGGAGGAGGCTACTACCACTATTCCTACTCGGTGGTGAGGGGCTGCGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR CAA 90 bp ACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGACGAGGTCATCCAGCTaGGCCACCACATACTCGCCC +
Preference number: 5 (lower is better)
Translates to: TTSRDTSRLGTGRRQAPATRSSS*ATTYSP
Trigger: GGGCGAGTATGTGGTGGCCAAGCTGGATGACCTCGT...CGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CAA 90 bp CGGGGTGCTGCCATGTGCATCATCTCCACGGCGCAGCAGGCCAGGCCGAAGGTCACGAGGTCATCCAGCTaGGCCACCACATACTCGCCC +
Preference number: 5 (lower is better)
Translates to: RGAAMCIISTAQQARPKVTRSSS*ATTYSP
Trigger: GGGCGAGTATGTGGTGGCCAAGCTGGATGACCTCGT...GACCTTCGGCCTGGCCTGCTGCGCCGTGGAGATGATGCACATGGCAGCACCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR CAA 90 bp CATGTCGTAGCGGGGTGCTGCCATGTGCATCATCTCCACGGCGCAGCAGGCCAGCTCCGGCGGGCCCAGTaGACGAGGTCATCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: HVVAGCCHVHHLHGAAGQLRRAQ*TRSSSL
Trigger: CAAGCTGGATGACCTCGTCAACTGGGCCCGCCGGAG...CTGGCCTGCTGCGCCGTGGAGATGATGCACATGGCAGCACCCCGCTACGACATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR CAA 90 bp TTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGCTCCGGCGGGCCCAGTaGACGAGGTCATCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: LTTSRDTSRLGTGRRQAPLRRAQ*TRSSSL
Trigger: CAAGCTGGATGACCTCGTCAACTGGGCCCGCCGGAG...CGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CAA 90 bp CACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCATCCATAGGCGCGGGACAGTGTCCTaGGCCCCCAGGAACCTTCTC +
Preference number: 5 (lower is better)
Translates to: HRGQAPLRGSAPSRPIHRRGTVS*APRNLL
Trigger: GAGAAGGTTCCTGGGGGCCAAGGACACTGTCCCGCG...CCTATGGATGGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS GCA 90 bp ACGTCCATCAATGGGGGATTGTTGAACCCGGGCTGTCGCAGCAAGTaGCGCAGGAGCTGGAGGGAGCTGCACGTGCTCACGCTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: TSINGGLLNPGCRSK*RRSWRELHVLTLQG
Trigger: CCCCTGCAGCGTGAGCACGTGCAGCTCCCTCCAGCTCCTGCGGCACTTGCTGCGACAGCCCGGGTTCAACAATCCCCCATTGATGGACGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436115.6
CDS GCA 90 bp GCCTCGGCGGTGGGCAGCCTGGGATGTAGATGTCCACGGGCACGATaGGGTCGCAGCCCCTCACCACCGAGTAGGAATAGTGGTAGTAGC +
Preference number: 5 (lower is better)
Translates to: ASAVGSLGCRCPRAR*GRSPSPPSRNSGSS
Trigger: GCTACTACCACTATTCCTACTCGGTGGTGAGGGGCTGCGACCGCATCGTGCCCGTGGACATCTACATCCCAGGCTGCCCACCGCCGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618074.4
CDS CCA 90 bp CCGAGTAGGAATAGTGGTAGTAGCCTCCTCCGTTGGCGCAGCTGTTaGGGAGGCACCGTGAGGGGAGTGTGCCGAAGACCCGCCTGCCCA +
Preference number: 5 (lower is better)
Translates to: PSRNSGSSLLRWRSC*GGTVRGVCRRPACP
Trigger: TGGGCAGGCGGGTCTTCGGCACACTCCCCTCACGGTGCCTCCCCAACAGCTGCGCCAACGGAGGAGGCTACTACCACTATTCCTACTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591358.1
CDS-3UTR CAA 90 bp CCGACTTCTCACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCACGAGGTCATCCAGCTaGGCCACCACATACTCGCCC +
Preference number: 5 (lower is better)
Translates to: PTSHRGQAPLRGSAPSRPTRSSS*ATTYSP
Trigger: GGGCGAGTATGTGGTGGCCAAGCTGGATGACCTCGT...GGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTGAGAAGTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CAA 90 bp CGGCAGCCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGCTCCGGCGGGCCCAGTaGACGAGGTCATCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: RQPEGRFIDNLTGHKQAGLRRAQ*TRSSSL
Trigger: CAAGCTGGATGACCTCGTCAACTGGGCCCGCCGGAG...CCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGGCTGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233627.14
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CAA 90 bp GACTTCTCACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCATCTCCGGCGGGCCCAGTaGACGAGGTCATCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: DFSQGTGSTKRQRSESAHLRRAQ*TRSSSL
Trigger: CAAGCTGGATGACCTCGTCAACTGGGCCCGCCGGAG...ATGGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTGAGAAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CAA 90 bp CGCAGCCCCTCACCACCGAGTAGGAATAGTGGTAGTAGCCTCCTCCGTTGGCGCGCTGGGGCCATCTTGTaGGTGAGTGTGCCGGCCACG +
Preference number: 5 (lower is better)
Translates to: RSPSPPSRNSGSSLLRWRAGAIL*VSVPAT
Trigger: CGTGGCCGGCACACTCACCAACAAGATGGCCCCAGC...GCGCCAACGGAGGAGGCTACTACCACTATTCCTACTCGGTGGTGAGGGGCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS-3UTR CAA 90 bp AGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCATCCATAGGATGAGCGCTGGGGCCATCTaGTTGGTGAGTGTGCCGGCC +
Preference number: 5 (lower is better)
Translates to: RGQAPLRGSAPSRPIHRMSAGAI*LVSVPA
Trigger: GGCCGGCACACTCACCAACAAGATGGCCCCAGCGCT...CATCCTATGGATGGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CAA 90 bp GGGAGGCGGCAGCCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGAGCGCTGGGGCCATCTaGTTGGTGAGTGTGCCGGCC +
Preference number: 5 (lower is better)
Translates to: GRRQPEGRFIDNLTGHKQSAGAI*LVSVPA
Trigger: GGCCGGCACACTCACCAACAAGATGGCCCCAGCGCT...CTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGGCTGCCGCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539480.5
ENST00000620479.4
CDS-3UTR CAA 90 bp GGCGGCAGCCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGAGCGCTGGGGCCATCTaGTTGGTGAGTGTGCCGGCC +
Preference number: 5 (lower is better)
Translates to: GGSPRAGLLTTSRDTSRLSAGAI*LVSVPA
Trigger: GGCCGGCACACTCACCAACAAGATGGCCCCAGCGCT...CAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGGCTGCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233627.14
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CAA 90 bp CCAGTTGACGAGGTCATCCAGCTTGGCCACCACATACTCGCCCCGGCTGCTGGGAGCCTCCGCTCCCGCTaGATCTTCCTCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: PVDEVIQLGHHILAPAAGSLRSR*IFLCSC
Trigger: GCAGCTGCAGAGGAAGATCAAGCGGGAGCGGAGGCT...CCCAGCAGCCGGGGCGAGTATGTGGTGGCCAAGCTGGATGACCTCGTCAACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546172.7
CDS-3UTR CAA 90 bp GCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCATCCATAGGATGGGGGAGCCCGACAGCACCGCCATCTaGGCCTCGGCCTTCAGACAA +
Preference number: 5 (lower is better)
Translates to: APLRGSAPSRPIHRMGEPDSTAI*ASAFRQ
Trigger: TTGTCTGAAGGCCGAGGCCAAGATGGCGGTGCTGTC...GGGCTCCCCCATCCTATGGATGGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000546283.5
CDS GCA 90 bp GTGCGGTCCCGGCCCTACCTGGGATGTAGATGTCCACGGGCACGATaGGGTCGCAGCCCCTCACCACCGAGTAGGAATAGTGGTAGTAGC +
Preference number: 5 (lower is better)
Translates to: VRSRPYLGCRCPRAR*GRSPSPPSRNSGSS
Trigger: GCTACTACCACTATTCCTACTCGGTGGTGAGGGGCTGCGACCGCATCGTGCCCGTGGACATCTACATCCCAGGTAGGGCCGGGACCGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000436115.6
ENST00000535382.1
ENST00000538523.5
ENST00000538662.5
ENST00000543289.5
ENST00000545446.5
ENST00000546283.5
ENST00000591358.1
CDS GCA 90 bp TCGGCCGTGGTGGGCAGCCTGGGATGTAGATGTCCACGGGCACGATaGGGTCGCAGCCCCTCACCACCGAGTAGGAATAGTGGTAGTAGC +
Preference number: 5 (lower is better)
Translates to: SAVVGSLGCRCPRAR*GRSPSPPSRNSGSS
Trigger: GCTACTACCACTATTCCTACTCGGTGGTGAGGGGCTGCGACCGCATCGTGCCCGTGGACATCTACATCCCAGGCTGCCCACCACGGCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620479.4
CDS-3UTR CAA 90 bp GGGAGGCGGCAGCCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGAGCCTCCGCTCCCGCTaGATCTTCCTCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: GRRQPEGRFIDNLTGHKQSLRSR*IFLCSC
Trigger: GCAGCTGCAGAGGAAGATCAAGCGGGAGCGGAGGCT...CTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGGCTGCCGCCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539480.5
ENST00000620479.4
CDS-3UTR CAA 90 bp GACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCCCGAGGGCAGGTTTATaGACAACCTCACGGGACACA +
Preference number: 5 (lower is better)
Translates to: DNLTGHKQAGDRTATGSGPRAGL*TTSRDT
Trigger: TGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGG...GCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CAA 90 bp CGGCAGCCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGGTCGTAGGGAAGACTaGCGAAGCGCTGGGGCCATC +
Preference number: 5 (lower is better)
Translates to: RQPEGRFIDNLTGHKQAGGRRED*RSAGAI
Trigger: GATGGCCCCAGCGCTTCGCAAGTCTTCCCTACGACC...CCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGGCTGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620479.4
CDS-3UTR CAA 90 bp GACTTCTCACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCCCATACGAGGTCATCCAGCTaGGCCACCACATACTCGCCC +
Preference number: 5 (lower is better)
Translates to: DFSQGTGSTKRQRSESAHTRSSS*ATTYSP
Trigger: GGGCGAGTATGTGGTGGCCAAGCTGGATGACCTCGT...ATGGGCCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTGAGAAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000546283.5
CDS-3UTR CAA 90 bp AGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGGCTGGGGCCATCTTGTaGGTGAGTGTGCCGGCCACG +
Preference number: 5 (lower is better)
Translates to: RAGLLTTSRDTSRLGTGRAGAIL*VSVPAT
Trigger: CGTGGCCGGCACACTCACCAACAAGATGGCCCCAGC...CCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CAA 90 bp TTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTGCTGGGGCCATCTTGTaGGTGAGTGTGCCGGCCACG +
Preference number: 5 (lower is better)
Translates to: LLTTSRDTSRLGTGRRQAAGAIL*VSVPAT
Trigger: CGTGGCCGGCACACTCACCAACAAGATGGCCCCAGC...AGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CAA 90 bp CAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCTGCAGGTCTTTGGTTaGTGCCAGGTAGGACCATAT +
Preference number: 5 (lower is better)
Translates to: QPHGTQAGWGQDGDRLRRLQVFG*CQVGPY
Trigger: ATATGGTCCTACCTGGCACAAACCAAAGACCTGCAG...CCGCCGGAGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR CAA 90 bp TCGCCGACTTCTCACAGGGGACAGGCTCCACTAAGAGGCAGCGCTCCGAGTCGGCTCCCACGTTTTCATTaGCCAAATCCGGCCACCCCG +
Preference number: 5 (lower is better)
Translates to: SPTSHRGQAPLRGSAPSRLPRFH*PNPATP
Trigger: CGGGGTGGCCGGATTTGGCAAATGAAAACGTGGGAG...CCGACTCGGAGCGCTGCCTCTTAGTGGAGCCTGTCCCCTGTGAGAAGTCGGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR CAA 90 bp GCGGCGGCGCTACCTGCGGTACCAGATCTGCAGCCTCCGCTCCCGCTTGATCTTCCTGTTCCTCCACTTTaGAGAGGCACCAGGATGTGC +
Preference number: 5 (lower is better)
Translates to: AAALPAVPDLQPPLPLDLPVPPL*RGTRMC
Trigger: GCACATCCTGGTGCCTCTCAAAAGTGGAGGAACAGG...AAGATCAAGCGGGAGCGGAGGCTGCAGATCTGGTACCGCAGGTAGCGCCGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR CAA 90 bp GCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGCCTGCAGGGACCTaGCCTCAGTCTCGCTTCCCG +
Preference number: 5 (lower is better)
Translates to: AGLLTTSRDTSRLGTGRRQPAGT*PQSRFP
Trigger: CGGGAAGCGAGACTGAGGCAAGGTCCCTGCAGGCTG...TCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313408.11
ENST00000539480.5
CDS TCA 90 bp AGACGCCGGACACAGAAGGCCATGCGGCGTGTGATCCTGTTTCTGTaGAATGTCCAGGACGGGCCCATCCACAGAGACAGGGAGGGGAGG +
Preference number: 5 (lower is better)
Translates to: RRRTQKAMRRVILFL*NVQDGPIHRDREGR
Trigger: CCTCCCCTCCCTGTCTCTGTGGATGGGCCCGTCCTGGACATTTCACAGAAACAGGATCACACGCCGCATGGCCTTCTGTGTCCGGCGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591358.1
CDS GCA 90 bp GGGAGGGAGGAGCTCAGTCTGGGATGTAGATGTCCACGGGCACGATaGGGTCGCAGCCCCTCACCACCGAGTAGGAATAGTGGTAGTAGC +
Preference number: 5 (lower is better)
Translates to: GREELSLGCRCPRAR*GRSPSPPSRNSGSS
Trigger: GCTACTACCACTATTCCTACTCGGTGGTGAGGGGCTGCGACCGCATCGTGCCCGTGGACATCTACATCCCAGACTGAGCTCCTCCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539480.5
ENST00000540530.5
CDS CCA 90 bp CCCATCCCCACCCGCCTTCAACTGCAGGCCAGGCACCTACGAGGCTaGAACTTGTCACGGAGAAGCAATGAGCAAACACGCACAGGCTCC +
Preference number: 5 (lower is better)
Translates to: PIPTRLQLQARHLRG*NLSRRSNEQTRTGS
Trigger: GGAGCCTGTGCGTGTTTGCTCATTGCTTCTCCGTGACAAGTTCCAGCCTCGTAGGTGCCTGGCCTGCAGTTGAAGGCGGGTGGGGATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591358.1
CDS-3UTR CAA 90 bp TTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCTAGCCTCCGCTCCCGCTaGATCTTCCTCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LLTTSRDTSRLGTGRRQASLRSR*IFLCSC
Trigger: GCAGCTGCAGAGGAAGATCAAGCGGGAGCGGAGGCT...AGCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CAA 90 bp AGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGAGCCTCCGCTCCCGCTaGATCTTCCTCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: RAGLLTTSRDTSRLGTGRSLRSR*IFLCSC
Trigger: GCAGCTGCAGAGGAAGATCAAGCGGGAGCGGAGGCT...CCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CAA 90 bp CCATGGAGACCACGTAGCGCGGCTCCGGCATCTGGTCGTAGACCTTGCGAAGCGCCGAGGGCAGGTTTATaGACAACCTCACGGGACACA +
Preference number: 5 (lower is better)
Translates to: PWRPRSAAPASGRRPCEAPRAGL*TTSRDT
Trigger: TGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGG...CGCTTCGCAAGGTCTACGACCAGATGCCGGAGCCGCGCTACGTGGTCTCCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534853.5
ENST00000546172.7
CDS TCA 90 bp GTGTGTGTACGTGTCTGCACGTTGGTGTGTGTATGTGTGTGCCTGTaGGTGTGCAGAGAGGCCCTGGCGCTCGAGGAGGGCCTACAGCTC +
Preference number: 5 (lower is better)
Translates to: VCVRVCTLVCVCVCL*VCREALALEEGLQL
Trigger: GAGCTGTAGGCCCTCCTCGAGCGCCAGGGCCTCTCTGCACACTCACAGGCACACACATACACACACCAACGTGCAGACACGTACACACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436115.6
CDS TCA 90 bp TCGCGCTCAGTGAGAGACGCCGGACACAGAAGGCCATGCGGCGTGTaGTCCTGTTTCTGTGAAATGTCCAGGACGGGCCCATCCACAGAG +
Preference number: 5 (lower is better)
Translates to: SRSVRDAGHRRPCGV*SCFCEMSRTGPSTE
Trigger: CTCTGTGGATGGGCCCGTCCTGGACATTTCACAGAAACAGGATCACACGCCGCATGGCCTTCTGTGTCCGGCGTCTCTCACTGAGCGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591358.1
CDS-3UTR CAA 90 bp AGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGACGAGGTCATCCAGCTaGGCCACCACATACTCGCCC +
Preference number: 5 (lower is better)
Translates to: RAGLLTTSRDTSRLGTGRTRSSS*ATTYSP
Trigger: GGGCGAGTATGTGGTGGCCAAGCTGGATGACCTCGT...CCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CAA 90 bp GGCAGCCCGAGGGCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGCCGAGGGCAGGTTTATaGACAACCTCACGGGACACA +
Preference number: 5 (lower is better)
Translates to: GSPRAGLLTTSRDTSRLGPRAGL*TTSRDT
Trigger: TGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGG...CCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGGGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CAA 90 bp TTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGCCCGAGGGCAGGTTTATaGACAACCTCACGGGACACA +
Preference number: 5 (lower is better)
Translates to: FIDNLTGHKQAGDRTATGPRAGL*TTSRDT
Trigger: TGTGTCCCGTGAGGTTGTCAATAAACCTGCCCTCGG...GCCTGTCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233627.14
ENST00000313408.11
ENST00000534853.5
ENST00000539480.5
ENST00000546172.7
ENST00000620479.4
CDS-3UTR CAA 90 bp CCCCCAGGAACCTTCTCGCTTGGTATTTCTAACTGCAGGTCTTTGGTTTGTGCCAGCCTCCGCTCCCGCTaGATCTTCCTCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: PPGTFSLGISNCRSLVCASLRSR*IFLCSC
Trigger: GCAGCTGCAGAGGAAGATCAAGCGGGAGCGGAGGCT...GGCACAAACCAAAGACCTGCAGTTAGAAATACCAAGCGAGAAGGTTCCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS-3UTR CAA 90 bp GCAGGTTTATTGACAACCTCACGGGACACAAGCAGGCTGGGGACAGGACGGCGACAGGAACCTTCTCGCTaGGTATTTCTAACTGCAGGT +
Preference number: 5 (lower is better)
Translates to: AGLLTTSRDTSRLGTGRRQEPSR*VFLTAG
Trigger: ACCTGCAGTTAGAAATACCAAGCGAGAAGGTTCCTG...TCGCCGTCCTGTCCCCAGCCTGCTTGTGTCCCGTGAGGTTGTCAATAAACCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313408.11
CDS TCA 90 bp TGCAAGTGTGCATGTGTGCGAGTGTGCATATGTGCATTGTGTGCGTaGGTGTGCGTGTGGTCCGTGTACACATCTGTCCATACATGTGAG +
Preference number: 5 (lower is better)
Translates to: CKCACVRVCICALCA*VCVWSVYTSVHTCE
Trigger: CTCACATGTATGGACAGATGTGTACACGGACCACACGCACACTCACGCACACAATGCACATATGCACACTCGCACACATGCACACTTGCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436115.6
CDS GCA 90 bp TGTGTGCAAGTGTGCATGTGTGCGAGTGTGCATATGTGCATTGTGTaGGTGAGTGTGCGTGTGGTCCGTGTACACATCTGTCCATACATG +
Preference number: 5 (lower is better)
Translates to: CVQVCMCASVHMCIV*VSVRVVRVHICPYM
Trigger: CATGTATGGACAGATGTGTACACGGACCACACGCACACTCACGCACACAATGCACATATGCACACTCGCACACATGCACACTTGCACACA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436115.6
CDS TCA 90 bp ACACATCTGTCCATACATGTGAGCTTGCATGCACATGTGCGCATGTaGGTGTGCATGCATGTGTTGTGTGTGTACGTGTCTGCACGTTGG +
Preference number: 5 (lower is better)
Translates to: THLSIHVSLHAHVRM*VCMHVLCVYVSARW
Trigger: CCAACGTGCAGACACGTACACACACAACACATGCATGCACACTCACATGCGCACATGTGCATGCAAGCTCACATGTATGGACAGATGTGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436115.6
CDS GCA 90 bp TGCGTGTGGTCCGTGTACACATCTGTCCATACATGTGAGCTTGCATaGACATGTGCGCATGTGAGTGTGCATGCATGTGTTGTGTGTGTA +
Preference number: 5 (lower is better)
Translates to: CVWSVYTSVHTCELA*TCAHVSVHACVVCV
Trigger: TACACACACAACACATGCATGCACACTCACATGCGCACATGTGCATGCAAGCTCACATGTATGGACAGATGTGTACACGGACCACACGCA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436115.6
CDS GCA 90 bp AGAAAAGAACTATCCTGCATTAAAAACTATCCTTGTCTCGACCACTaGGGCCCTGGCAGGACGTTCGCCGTGGCATTGTTTAGGAAACAA +
Preference number: 5 (lower is better)
Translates to: RKELSCIKNYPCLDH*GPGRTFAVALFRKQ
Trigger: TTGTTTCCTAAACAATGCCACGGCGAACGTCCTGCCAGGGCCGCAGTGGTCGAGACAAGGATAGTTTTTAATGCAGGATAGTTCTTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436115.6
CDS CCA 72 bp ACTCCCTCACAGGGGCCGCCGGGCTCCGTGTGGCGCTaGCCCTGTCTCCAGCTCCCTCGTGGGCGGTGCGGT +
Preference number: 6 (lower is better)
Translates to: TPSQGPPGSVWR*PCLQLPRGRCG
Trigger: ACCGCACCGCCCACGAGGGAGCTGGAGACAGGGCCAGCGCCACACGGAGCCCGGCGGCCCCTGTGAGGGAGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000436115.6
ENST00000535382.1
ENST00000538523.5
ENST00000538662.5
ENST00000543289.5
ENST00000545446.5
ENST00000546283.5
ENST00000591358.1
CDS CCA 72 bp TGTGGGACTCCCTCACAGGGGCCGCCGGGCTCCGTGTaGCGCTGGCCCTGTCTCCAGCTCCCTCGTGGGCGG +
Preference number: 6 (lower is better)
Translates to: CGTPSQGPPGSV*RWPCLQLPRGR
Trigger: CCGCCCACGAGGGAGCTGGAGACAGGGCCAGCGCCACACGGAGCCCGGCGGCCCCTGTGAGGGAGTCCCACA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000436115.6
ENST00000535382.1
ENST00000538523.5
ENST00000538662.5
ENST00000543289.5
ENST00000545446.5
ENST00000546283.5
ENST00000591358.1
CDS GCA 72 bp GAGGCGTCAGCCACGCAGGTGCTTCCCAGAGGCGGATaGGAGCCCCCACGGCCGCTGCCAGAGGCCTGGACC +
Preference number: 6 (lower is better)
Translates to: EASATQVLPRGG*EPPRPLPEAWT
Trigger: GGTCCAGGCCTCTGGCAGCGGCCGTGGGGGCTCGCATCCGCCTCTGGGAAGCACCTGCGTGGCTGACGCCTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000543289.5
ENST00000545446.5
CDS CCA 72 bp CGGGCTCGGGTCAGACGCCACCCCCGGAGCCCCGCGTaGCCCAGCGTGAGACTCCACGTGGAGCACCCAGAA +
Preference number: 6 (lower is better)
Translates to: RARVRRHPRSPA*PSVRLHVEHPE
Trigger: TTCTGGGTGCTCCACGTGGAGTCTCACGCTGGGCCACGCGGGGCTCCGGGGGTGGCGTCTGACCCGAGCCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436115.6
CDS CCA 72 bp AGGCGGGGTCCGTGCGCAGCTCACTCTGGGGGCGGCTaGGCGGCTGGGACGAGGCCTACCTTGCGAAGCGCT +
Preference number: 6 (lower is better)
Translates to: RRGPCAAHSGGG*AAGTRPTLRSA
Trigger: AGCGCTTCGCAAGGTAGGCCTCGTCCCAGCCGCCCAGCCGCCCCCAGAGTGAGCTGCGCACGGACCCCGCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538662.5
ENST00000543289.5
ENST00000622587.4
CDS GCA 72 bp GAGGCGTCAGCCACGCAGGTGCTTCCCAGAGGCGGATaGGAGCCCCCACGGCCGCTGCCAGAGGCCTGCTTG +
Preference number: 6 (lower is better)
Translates to: EASATQVLPRGG*EPPRPLPEACL
Trigger: CAAGCAGGCCTCTGGCAGCGGCCGTGGGGGCTCGCATCCGCCTCTGGGAAGCACCTGCGTGGCTGACGCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414651.3
CDS GCA 72 bp GAGACACACGGGCACAGGAGGCGTCAGCCACGCAGGTaGTTCCCAGAGGCGGATGCGAGCCCCCACGGCCGC +
Preference number: 6 (lower is better)
Translates to: ETHGHRRRQPRR*FPEADASPHGR
Trigger: GCGGCCGTGGGGGCTCGCATCCGCCTCTGGGAAGCACCTGCGTGGCTGACGCCTCCTGTGCCCGTGTGTCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414651.3
ENST00000543289.5
ENST00000545446.5
CDS GCA 72 bp GGCAGGGCTGCCCGGGCAGAAATGGCCAGGTCCACCTaGCCGCCAGAAGCCTGTGTTGGGACGGCCGCTGGC +
Preference number: 6 (lower is better)
Translates to: GRAARAEMARST*PPEACVGTAAG
Trigger: GCCAGCGGCCGTCCCAACACAGGCTTCTGGCGGGCAGGTGGACCTGGCCATTTCTGCCCGGGCAGCCCTGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436115.6
CDS GCA 72 bp TTCCCGGGGCCGCCGCCCAAAGCGGCTCGGAGCGCATaGGGAAACCGGAACCTGGAGCCGGGAGGTTCCGCT +
Preference number: 6 (lower is better)
Translates to: FPGPPPKAARSA*GNRNLEPGGSA
Trigger: AGCGGAACCTCCCGGCTCCAGGTTCCGGTTTCCGCATGCGCTCCGAGCCGCTTTGGGCGGCGGCCCCGGGAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546283.5
CDS TCA 72 bp GCCTCCTCCGTTGGCGCAGCTGTTGGGGAGGCACCGTaGGGGGAGTGTGCCGAAGACCCGCCTGCCCACCCT +
Preference number: 6 (lower is better)
Translates to: ASSVGAAVGEAP*GECAEDPPAHP
Trigger: AGGGTGGGCAGGCGGGTCTTCGGCACACTCCCCTCACGGTGCCTCCCCAACAGCTGCGCCAACGGAGGAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591358.1
CDS GCA 72 bp CATCTGGTCGTAGACCTGGAAGAGAGGCGGGGTCCGTaGGCAGCTCACTCTGGGGGCGGCTGGGCGGCTGGG +
Preference number: 6 (lower is better)
Translates to: HLVVDLEERRGP*AAHSGGGWAAG
Trigger: CCCAGCCGCCCAGCCGCCCCCAGAGTGAGCTGCGCACGGACCCCGCCTCTCTTCCAGGTCTACGACCAGATG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538662.5
ENST00000543289.5
ENST00000622587.4
CDS GCA 72 bp TGGCGCAGCTGTTGGGGAGGCACCGTGAGGGGAGTGTaGCGAAGACCCGCCTGCCCACCCTCCCTCCACGAG +
Preference number: 6 (lower is better)
Translates to: WRSCWGGTVRGV*RRPACPPSLHE
Trigger: CTCGTGGAGGGAGGGTGGGCAGGCGGGTCTTCGGCACACTCCCCTCACGGTGCCTCCCCAACAGCTGCGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591358.1
CDS CCA 72 bp CTCCGTGTGGCGCTGGCCCTGTCTCCAGCTCCCTCGTaGGCGGTGCGGTCCCGGCCCTACCTGGGATGTAGA +
Preference number: 6 (lower is better)
Translates to: LRVALALSPAPS*AVRSRPYLGCR
Trigger: TCTACATCCCAGGTAGGGCCGGGACCGCACCGCCCACGAGGGAGCTGGAGACAGGGCCAGCGCCACACGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000436115.6
ENST00000535382.1
ENST00000538523.5
ENST00000538662.5
ENST00000543289.5
ENST00000545446.5
ENST00000546283.5
ENST00000591358.1
CDS CCA 72 bp CCCTGGGCATGCGCCCTCACCGCCCTGTCAGTCACCTaGGTCTGCAGGAGGCCTGCCCCAGCTGCCATCTGC +
Preference number: 6 (lower is better)
Translates to: PWACALTALSVT*VCRRPAPAAIC
Trigger: GCAGATGGCAGCTGGGGCAGGCCTCCTGCAGACCCAGGTGACTGACAGGGCGGTGAGGGCGCATGCCCAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535382.1
ENST00000539882.1
CDS CAA 90 bp GCAGCTCACTCTGGGGGCGGCTGGGCGGCTGGGACGAGGCCTACCTaGCGAAGCGCTGGGGCCATCTTGTTGGTGAGTGTGCCGGCCACG +
Preference number: 6 (lower is better)
Translates to: AAHSGGGWAAGTRPT*RSAGAILLVSVPAT
Trigger: CGTGGCCGGCACACTCACCAACAAGATGGCCCCAGCGCTTCGCAAGGTAGGCCTCGTCCCAGCCGCCCAGCCGCCCCCAGAGTGAGCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538662.5
ENST00000543289.5
ENST00000622587.4
CDS CAA 90 bp CTGGAGCCGGGAGGTTCCGCTGCGCTTTCGGCCTCCGTGGTCGTGTaGCGCCGTGCACCCCCAGATCACCCGAGGCGGAAAGGTCATCGG +
Preference number: 6 (lower is better)
Translates to: LEPGGSAALSASVVV*RRAPPDHPRRKGHR
Trigger: CCGATGACCTTTCCGCCTCGGGTGATCTGGGGGTGCACGGCGCAACACGACCACGGAGGCCGAAAGCGCAGCGGAACCTCCCGGCTCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546283.5
CDS CAA 90 bp TTCTGGGGGCGGCTGGGCGGCTTGCGAAGCGCTGGGGCCATCTTGTaGGTGAGTGTGCCGGCCACGATCATGACGTCGGACTGGCGCGGG +
Preference number: 6 (lower is better)
Translates to: FWGRLGGLRSAGAIL*VSVPATIMTSDWRG
Trigger: CCCGCGCCAGTCCGACGTCATGATCGTGGCCGGCACACTCACCAACAAGATGGCCCCAGCGCTTCGCAAGCCGCCCAGCCGCCCCCAGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618074.4
CDS GCA 72 bp TGGCGCTGGCCCTGTCTCCAGCTCCCTCGTGGGCGGTaGGGTCCCGGCCCTACCTGGGATGTAGATGTCCAC +
Preference number: 6 (lower is better)
Translates to: WRWPCLQLPRGR*GPGPTWDVDVH
Trigger: GTGGACATCTACATCCCAGGTAGGGCCGGGACCGCACCGCCCACGAGGGAGCTGGAGACAGGGCCAGCGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000436115.6
ENST00000535382.1
ENST00000538523.5
ENST00000538662.5
ENST00000543289.5
ENST00000545446.5
ENST00000546283.5
ENST00000591358.1
CDS GCA 72 bp GCATGCGCCCTCACCGCCCTGTCAGTCACCTGGGTCTaGAGGAGGCCTGCCCCAGCTGCCATCTGCACAGGG +
Preference number: 6 (lower is better)
Translates to: ACALTALSVTWV*RRPAPAAICTG
Trigger: CCCTGTGCAGATGGCAGCTGGGGCAGGCCTCCTGCAGACCCAGGTGACTGACAGGGCGGTGAGGGCGCATGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535382.1
ENST00000539882.1
CDS CCA 72 bp CAGCTCCCTCGTGGGCGGTGCGGTCCCGGCCCTACCTaGGATGTAGATGTCCACGGGCACGATGCGGTCGCA +
Preference number: 6 (lower is better)
Translates to: QLPRGRCGPGPT*DVDVHGHDAVA
Trigger: TGCGACCGCATCGTGCCCGTGGACATCTACATCCCAGGTAGGGCCGGGACCGCACCGCCCACGAGGGAGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000436115.6
ENST00000535382.1
ENST00000538523.5
ENST00000538662.5
ENST00000543289.5
ENST00000545446.5
ENST00000546283.5
ENST00000591358.1
CDS CCA 72 bp CCACGGCCGCTGCCAGAGGCCTGCTTGGGCCATCGGTaGCCACGCTCTGATGGACACCTCGTGCCTGCACAG +
Preference number: 6 (lower is better)
Translates to: PRPLPEACLGHR*PRSDGHLVPAQ
Trigger: CTGTGCAGGCACGAGGTGTCCATCAGAGCGTGGCCACCGATGGCCCAAGCAGGCCTCTGGCAGCGGCCGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414651.3
CDS CCA 72 bp TCATCTCCACGGCGCAGCAGGCCAGGCCGAAGGTCATaGGCCACAGAGAACTCTGCGGAGGCCGGGCTCGGG +
Preference number: 6 (lower is better)
Translates to: SSPRRSRPGRRS*ATENSAEAGLG
Trigger: CCCGAGCCCGGCCTCCGCAGAGTTCTCTGTGGCCCATGACCTTCGGCCTGGCCTGCTGCGCCGTGGAGATGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436115.6
CDS CCA 72 bp GGCGGATGCGAGCCCCCACGGCCGCTGCCAGAGGCCTaGACCCACATGAGGTCAGGGACTGGGATGTGTGAC +
Preference number: 6 (lower is better)
Translates to: GGCEPPRPLPEA*THMRSGTGMCD
Trigger: GTCACACATCCCAGTCCCTGACCTCATGTGGGTCCAGGCCTCTGGCAGCGGCCGTGGGGGCTCGCATCCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539882.1
ENST00000543289.5
ENST00000545446.5
CDS CCA 72 bp TGGAGCCGGGAGGTTCCGCTGCGCTTTCGGCCTCCGTaGTCGTGTTGCGCCGTGCACCCCCAGATCACCCGA +
Preference number: 6 (lower is better)
Translates to: WSREVPLRFRPP*SCCAVHPQITR
Trigger: TCGGGTGATCTGGGGGTGCACGGCGCAACACGACCACGGAGGCCGAAAGCGCAGCGGAACCTCCCGGCTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546283.5
CDS CCA 72 bp CCAAAGCGGCTCGGAGCGCATGCGGAAACCGGAACCTaGAGCCGGGAGGTTCCGCTGCGCTTTCGGCCTCCG +
Preference number: 6 (lower is better)
Translates to: PKRLGAHAETGT*SREVPLRFRPP
Trigger: CGGAGGCCGAAAGCGCAGCGGAACCTCCCGGCTCCAGGTTCCGGTTTCCGCATGCGCTCCGAGCCGCTTTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546283.5
CDS CCA 72 bp CACCCTCGCCTGATTCCGGCTCTGTCAGTGAGGCGCTaGGGTCCACCCGGGGCAGGGAGCTGGAAACCCCAG +
Preference number: 6 (lower is better)
Translates to: HPRLIPALSVRR*GPPGAGSWKPQ
Trigger: CTGGGGTTTCCAGCTCCCTGCCCCGGGTGGACCCCAGCGCCTCACTGACAGAGCCGGAATCAGGCGAGGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591358.1
CDS CAA 90 bp GCGGCTGGGACGAGGCCTACCTTGCGAAGCGCTGGGGCCATCTTGTaGGTGAGTGTGCCGGCCACGATCATGACGTCGGACTGGCGCGGG +
Preference number: 6 (lower is better)
Translates to: AAGTRPTLRSAGAIL*VSVPATIMTSDWRG
Trigger: CCCGCGCCAGTCCGACGTCATGATCGTGGCCGGCACACTCACCAACAAGATGGCCCCAGCGCTTCGCAAGGTAGGCCTCGTCCCAGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538662.5
ENST00000543289.5
ENST00000622587.4
CDS CAA 90 bp GCATTCTGGGGGCGGCTGGGCGGCTTGCGAAGCGCTGGGGCCATCTaGTTGGTGAGTGTGCCGGCCACGATCATGACGTCGGACTGGCGC +
Preference number: 6 (lower is better)
Translates to: AFWGRLGGLRSAGAI*LVSVPATIMTSDWR
Trigger: GCGCCAGTCCGACGTCATGATCGTGGCCGGCACACTCACCAACAAGATGGCCCCAGCGCTTCGCAAGCCGCCCAGCCGCCCCCAGAATGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618074.4
CDS TCA 72 bp CAGCTTCACCTGCTTGGGCCATCGGTGGCCACGCTCTaGTGGACACCTCGTGCCTGCACAGCCGGGCCCACG +
Preference number: 6 (lower is better)
Translates to: QLHLLGPSVATL*WTPRACTAGPT
Trigger: CGTGGGCCCGGCTGTGCAGGCACGAGGTGTCCATCAGAGCGTGGCCACCGATGGCCCAAGCAGGTGAAGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539882.1
ENST00000543289.5
ENST00000545446.5
CDS GCA 72 bp CGCTGCGCTTTCGGCCTCCGTGGTCGTGTTGCGCCGTaGACCCCCAGATCACCCGAGGCGGAAAGGTCATCG +
Preference number: 6 (lower is better)
Translates to: RCAFGLRGRVAP*TPRSPEAERSS
Trigger: CGATGACCTTTCCGCCTCGGGTGATCTGGGGGTGCACGGCGCAACACGACCACGGAGGCCGAAAGCGCAGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546283.5
CDS GCA 72 bp ATGCGGAAACCGGAACCTGGAGCCGGGAGGTTCCGCTaGGCTTTCGGCCTCCGTGGTCGTGTTGCGCCGTGC +
Preference number: 6 (lower is better)
Translates to: MRKPEPGAGRFR*AFGLRGRVAPC
Trigger: GCACGGCGCAACACGACCACGGAGGCCGAAAGCGCAGCGGAACCTCCCGGCTCCAGGTTCCGGTTTCCGCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546283.5
CDS CCA 72 bp CCGGCTGCTGGGTTTGGGAGCCACGGCTCTGGCCTTTaGCAGGGCAGGCTGGGTGCTGGCACAGAGACACAC +
Preference number: 6 (lower is better)
Translates to: PAAGFGSHGSGL*QGRLGAGTETH
Trigger: GTGTGTCTCTGTGCCAGCACCCAGCCTGCCCTGCCAAAGGCCAGAGCCGTGGCTCCCAAACCCAGCAGCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414651.3
ENST00000543289.5
ENST00000545446.5
CDS CCA 72 bp GGCATTCTGGGGGCGGCTGGGCGGCTTGCGAAGCGCTaGGGCCATCTTGTTGGTGAGTGTGCCGGCCACGAT +
Preference number: 6 (lower is better)
Translates to: GILGAAGRLAKR*GHLVGECAGHD
Trigger: ATCGTGGCCGGCACACTCACCAACAAGATGGCCCCAGCGCTTCGCAAGCCGCCCAGCCGCCCCCAGAATGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618074.4
CDS CAA 72 bp GGAGGTTCCGCTGCGCTTTCGGCCTCCGTGGTCGTGTaGCGCCGTGCACCCCCAGATCACCCGAGGCGGAAA +
Preference number: 6 (lower is better)
Translates to: GGSAALSASVVV*RRAPPDHPRRK
Trigger: TTTCCGCCTCGGGTGATCTGGGGGTGCACGGCGCAACACGACCACGGAGGCCGAAAGCGCAGCGGAACCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546283.5
CDS CAA 72 bp GGGCGGCTGGGCGGCTTGCGAAGCGCTGGGGCCATCTaGTTGGTGAGTGTGCCGGCCACGATCATGACGTCG +
Preference number: 6 (lower is better)
Translates to: GRLGGLRSAGAI*LVSVPATIMTS
Trigger: CGACGTCATGATCGTGGCCGGCACACTCACCAACAAGATGGCCCCAGCGCTTCGCAAGCCGCCCAGCCGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618074.4
CDS CAA 90 bp TGGGCGGCTGGGACGAGGCCTACCTTGCGAAGCGCTGGGGCCATCTaGTTGGTGAGTGTGCCGGCCACGATCATGACGTCGGACTGGCGC +
Preference number: 6 (lower is better)
Translates to: WAAGTRPTLRSAGAI*LVSVPATIMTSDWR
Trigger: GCGCCAGTCCGACGTCATGATCGTGGCCGGCACACTCACCAACAAGATGGCCCCAGCGCTTCGCAAGGTAGGCCTCGTCCCAGCCGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538662.5
ENST00000543289.5
ENST00000622587.4
CDS CAA 90 bp TGGGGGCCGCGGGTCTTTCGGTTAACAGCCGAACGCGCTAACCGATaGCGCCACAGAGACGACACTGCGCTCCGGCGCCCTGGGAGACCT +
Preference number: 6 (lower is better)
Translates to: WGPRVFRLTAERANR*RHRDDTALRRPGRP
Trigger: AGGTCTCCCAGGGCGCCGGAGCGCAGTGTCGTCTCTGTGGCGCAATCGGTTAGCGCGTTCGGCTGTTAACCGAAAGACCCGCGGCCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546283.5
CDS CCA 72 bp TTGAACCCGGGCTGTCGCAGCAAGTGCCGCAGGAGCTaGAGGGAGCTGCACGTGCTCACGCTGCAGGGGGAT +
Preference number: 6 (lower is better)
Translates to: LNPGCRSKCRRS*RELHVLTLQGD
Trigger: ATCCCCCTGCAGCGTGAGCACGTGCAGCTCCCTCCAGCTCCTGCGGCACTTGCTGCGACAGCCCGGGTTCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436115.6
CDS CCA 72 bp CTGGGCGGCTGGGACGAGGCCTACCTTGCGAAGCGCTaGGGCCATCTTGTTGGTGAGTGTGCCGGCCACGAT +
Preference number: 6 (lower is better)
Translates to: LGGWDEAYLAKR*GHLVGECAGHD
Trigger: ATCGTGGCCGGCACACTCACCAACAAGATGGCCCCAGCGCTTCGCAAGGTAGGCCTCGTCCCAGCCGCCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538662.5
ENST00000543289.5
ENST00000622587.4
CDS CAA 72 bp CGGGCCCACAGGGTTTTCCTCCTGACTGTCCAGCCTTaGCCACTGCGTGGACTGTCCCAGGGAGGGTCCCGG +
Preference number: 6 (lower is better)
Translates to: RAHRVFLLTVQP*PLRGLSQGGSR
Trigger: CCGGGACCCTCCCTGGGACAGTCCACGCAGTGGCAAAGGCTGGACAGTCAGGAGGAAAACCCTGTGGGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535382.1
CDS CAA 72 bp CCGCCGGTGCCGCGCTCACCTGACAGCACCGCCATCTaGGCCTCGGCCTTCAGACAACCTCTGAGGTCCGTT +
Preference number: 6 (lower is better)
Translates to: PPVPRSPDSTAI*ASAFRQPLRSV
Trigger: AACGGACCTCAGAGGTTGTCTGAAGGCCGAGGCCAAGATGGCGGTGCTGTCAGGTGAGCGCGGCACCGGCGG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543289.5
CDS CAA 72 bp CGGCTGGGCGGCTTGCGAAGCGCTGGGGCCATCTTGTaGGTGAGTGTGCCGGCCACGATCATGACGTCGGAC +
Preference number: 6 (lower is better)
Translates to: RLGGLRSAGAIL*VSVPATIMTSD
Trigger: GTCCGACGTCATGATCGTGGCCGGCACACTCACCAACAAGATGGCCCCAGCGCTTCGCAAGCCGCCCAGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618074.4
CDS TCA 72 bp GCACCGCCATCTTGGCCTCGGCCTTCAGACAACCTCTaGGGTCCGTTCTCCTTAGCGCTCCGGGTTCCCGGG +
Preference number: 6 (lower is better)
Translates to: APPSWPRPSDNL*GPFSLALRVPG
Trigger: CCCGGGAACCCGGAGCGCTAAGGAGAACGGACCTCAGAGGTTGTCTGAAGGCCGAGGCCAAGATGGCGGTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546283.5
CDS GCA 72 bp AGGGGGTACGACCTCCCCCAGAAGGCCAGCTTCACCTaGTTGGGCCATCGGTGGCCACGCTCTGATGGACAC +
Preference number: 6 (lower is better)
Translates to: RGYDLPQKASFT*LGHRWPRSDGH
Trigger: GTGTCCATCAGAGCGTGGCCACCGATGGCCCAAGCAGGTGAAGCTGGCCTTCTGGGGGAGGTCGTACCCCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000539882.1
ENST00000543289.5
ENST00000545446.5
CDS CCA 72 bp AGGCTACAGAGTGAGGCAGGGCTGCCCGGGCAGAAATaGCCAGGTCCACCTGCCCGCCAGAAGCCTGTGTTG +
Preference number: 6 (lower is better)
Translates to: RLQSEAGLPGQK*PGPPARQKPVL
Trigger: CAACACAGGCTTCTGGCGGGCAGGTGGACCTGGCCATTTCTGCCCGGGCAGCCCTGCCTCACTCTGTAGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436115.6
CDS CCA 72 bp CCCCAGAAGGCCAGCTTCACCTGCTTGGGCCATCGGTaGCCACGCTCTGATGGACACCTCGTGCCTGCACAG +
Preference number: 6 (lower is better)
Translates to: PQKASFTCLGHR*PRSDGHLVPAQ
Trigger: CTGTGCAGGCACGAGGTGTCCATCAGAGCGTGGCCACCGATGGCCCAAGCAGGTGAAGCTGGCCTTCTGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539882.1
ENST00000543289.5
ENST00000545446.5
CDS CCA 72 bp GGTACGACCTCCCCCAGAAGGCCAGCTTCACCTGCTTaGGCCATCGGTGGCCACGCTCTGATGGACACCTCG +
Preference number: 6 (lower is better)
Translates to: GTTSPRRPASPA*AIGGHALMDTS
Trigger: CGAGGTGTCCATCAGAGCGTGGCCACCGATGGCCCAAGCAGGTGAAGCTGGCCTTCTGGGGGAGGTCGTACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539882.1
ENST00000543289.5
ENST00000545446.5
CDS CCA 72 bp ATCACCCGAGGCGGAAAGGTCATCGGAGTGCGCACGTaGGGGCCGCGGGTCTTTCGGTTAACAGCCGAACGC +
Preference number: 6 (lower is better)
Translates to: ITRGGKVIGVRT*GPRVFRLTAER
Trigger: GCGTTCGGCTGTTAACCGAAAGACCCGCGGCCCCCACGTGCGCACTCCGATGACCTTTCCGCCTCGGGTGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546283.5
CDS CAA 72 bp GGGTACGACCTCCCCCAGAAGGCCAGCTTCACCTGCTaGGGCCATCGGTGGCCACGCTCTGATGGACACCTC +
Preference number: 6 (lower is better)
Translates to: GYDLPQKASFTC*GHRWPRSDGHL
Trigger: GAGGTGTCCATCAGAGCGTGGCCACCGATGGCCCAAGCAGGTGAAGCTGGCCTTCTGGGGGAGGTCGTACCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539882.1
ENST00000543289.5
ENST00000545446.5
CDS CAA 90 bp CTCGAGGAGGGCCTACAGCTCATAGTACTCACCCGGCGGGCCCAGTaGACGAGGTCATCCAGCTTGGCCACCACATACTCGCCCCGGCTG +
Preference number: 6 (lower is better)
Translates to: LEEGLQLIVLTRRAQ*TRSSSLATTYSPRL
Trigger: CAGCCGGGGCGAGTATGTGGTGGCCAAGCTGGATGACCTCGTCAACTGGGCCCGCCGGGTGAGTACTATGAGCTGTAGGCCCTCCTCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436115.6
CDS TCA 72 bp ACAGTGCCAACACCCAGCCCCTGTCTATGGGGCGGCTaGGCCTCACCCTCGCCTGATTCCGGCTCTGTCAGT +
Preference number: 6 (lower is better)
Translates to: TVPTPSPCLWGG*ASPSPDSGSVS
Trigger: ACTGACAGAGCCGGAATCAGGCGAGGGTGAGGCTCAGCCGCCCCATAGACAGGGGCTGGGTGTTGGCACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591358.1
CDS CAA 72 bp GGGACGAGGCCTACCTTGCGAAGCGCTGGGGCCATCTaGTTGGTGAGTGTGCCGGCCACGATCATGACGTCG +
Preference number: 6 (lower is better)
Translates to: GTRPTLRSAGAI*LVSVPATIMTS
Trigger: CGACGTCATGATCGTGGCCGGCACACTCACCAACAAGATGGCCCCAGCGCTTCGCAAGGTAGGCCTCGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538662.5
ENST00000543289.5
ENST00000622587.4
CDS CAA 72 bp AAGCCGCGCAGGCCAGGAGCTGACAGCACCGCCATCTaGGCCTCGGCCTTCAGACAACCTCTGAGGTCCGTT +
Preference number: 6 (lower is better)
Translates to: KPRRPGADSTAI*ASAFRQPLRSV
Trigger: AACGGACCTCAGAGGTTGTCTGAAGGCCGAGGCCAAGATGGCGGTGCTGTCAGCTCCTGGCCTGCGCGGCTT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000545446.5
ENST00000546283.5
ENST00000618074.4
CDS CAA 72 bp CGGGTCTTTCGGTTAACAGCCGAACGCGCTAACCGATaGCGCCACAGAGACGACACTGCGCTCCGGCGCCCT +
Preference number: 6 (lower is better)
Translates to: RVFRLTAERANR*RHRDDTALRRP
Trigger: AGGGCGCCGGAGCGCAGTGTCGTCTCTGTGGCGCAATCGGTTAGCGCGTTCGGCTGTTAACCGAAAGACCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546283.5
CDS CAA 90 bp GCATCTGGTCGTAGGGAAGACTTGCGAAGCGCTGGGGCCATCTTGTaGGTGAGTGTGCCGGCCACGATCATGACGTCGGACTGGCGCGGG +
Preference number: 6 (lower is better)
Translates to: ASGRREDLRSAGAIL*VSVPATIMTSDWRG
Trigger: CCCGCGCCAGTCCGACGTCATGATCGTGGCCGGCACACTCACCAACAAGATGGCCCCAGCGCTTCGCAAGTCTTCCCTACGACCAGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620479.4
CDS CAA 90 bp CCGGCATCTGGTCGTAGGGAAGACTTGCGAAGCGCTGGGGCCATCTaGTTGGTGAGTGTGCCGGCCACGATCATGACGTCGGACTGGCGC +
Preference number: 6 (lower is better)
Translates to: PASGRREDLRSAGAI*LVSVPATIMTSDWR
Trigger: GCGCCAGTCCGACGTCATGATCGTGGCCGGCACACTCACCAACAAGATGGCCCCAGCGCTTCGCAAGTCTTCCCTACGACCAGATGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620479.4
CDS TCA 72 bp GTCCCACCATTTCAACAGGGGGCTCCAGCCACTCTCTaGGCGCGTGGGCTACAGGCGAGTAGTAGCGCAGGT +
Preference number: 6 (lower is better)
Translates to: VPPFQQGAPATL*ARGLQASSSAG
Trigger: ACCTGCGCTACTACTCGCCTGTAGCCCACGCGCTCAGAGAGTGGCTGGAGCCCCCTGTTGAAATGGTGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436115.6
CDS GCA 72 bp CGGCCCTACCTGGGATGTAGATGTCCACGGGCACGATaGGGTCGCAGCCCCTCACCACCGAGTAGGAATAGT +
Preference number: 6 (lower is better)
Translates to: RPYLGCRCPRAR*GRSPSPPSRNS
Trigger: ACTATTCCTACTCGGTGGTGAGGGGCTGCGACCGCATCGTGCCCGTGGACATCTACATCCCAGGTAGGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000313408.11
ENST00000414651.3
ENST00000436115.6
ENST00000535382.1
ENST00000538523.5
ENST00000538662.5
ENST00000543289.5
ENST00000545446.5
ENST00000546283.5
ENST00000591358.1
CDS CCA 72 bp AATAGTGGTAGTAGCCTCCTCCGTTGGCGCAGCTGTTaGGGAGGCACCGTGAGGGGAGTGTGCCGAAGACCC +
Preference number: 6 (lower is better)
Translates to: NSGSSLLRWRSC*GGTVRGVCRRP
Trigger: GGGTCTTCGGCACACTCCCCTCACGGTGCCTCCCCAACAGCTGCGCCAACGGAGGAGGCTACTACCACTATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591358.1
CDS CCA 72 bp CCACCGAGTAGGAATAGTGGTAGTAGCCTCCTCCGTTaGCGCAGCTGTTGGGGAGGCACCGTGAGGGGAGTG +
Preference number: 6 (lower is better)
Translates to: PPSRNSGSSLLR*RSCWGGTVRGV
Trigger: CACTCCCCTCACGGTGCCTCCCCAACAGCTGCGCCAACGGAGGAGGCTACTACCACTATTCCTACTCGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591358.1
CDS CAA 72 bp ACGAGGCCTACCTTGCGAAGCGCTGGGGCCATCTTGTaGGTGAGTGTGCCGGCCACGATCATGACGTCGGAC +
Preference number: 6 (lower is better)
Translates to: TRPTLRSAGAIL*VSVPATIMTSD
Trigger: GTCCGACGTCATGATCGTGGCCGGCACACTCACCAACAAGATGGCCCCAGCGCTTCGCAAGGTAGGCCTCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538662.5
ENST00000543289.5
ENST00000622587.4
CDS CAA 90 bp CCCACCCGCCTTCAACTGCAGGCCAGGCACCTACGAGGCTGGAACTaGTCACGGAGAAGCAATGAGCAAACACGCACAGGCTCCCAGAGC +
Preference number: 6 (lower is better)
Translates to: PTRLQLQARHLRGWN*SRRSNEQTRTGSQS
Trigger: GCTCTGGGAGCCTGTGCGTGTTTGCTCATTGCTTCTCCGTGACAAGTTCCAGCCTCGTAGGTGCCTGGCCTGCAGTTGAAGGCGGGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591358.1
CDS CAA 72 bp GGCCTACAGCTCATAGTACTCACCCGGCGGGCCCAGTaGACGAGGTCATCCAGCTTGGCCACCACATACTCG +
Preference number: 6 (lower is better)
Translates to: GLQLIVLTRRAQ*TRSSSLATTYS
Trigger: CGAGTATGTGGTGGCCAAGCTGGATGACCTCGTCAACTGGGCCCGCCGGGTGAGTACTATGAGCTGTAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436115.6
CDS CAA 72 bp CGTAGGGAAGACTTGCGAAGCGCTGGGGCCATCTTGTaGGTGAGTGTGCCGGCCACGATCATGACGTCGGAC +
Preference number: 6 (lower is better)
Translates to: RREDLRSAGAIL*VSVPATIMTSD
Trigger: GTCCGACGTCATGATCGTGGCCGGCACACTCACCAACAAGATGGCCCCAGCGCTTCGCAAGTCTTCCCTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620479.4
CDS CAA 72 bp GGTCGTAGGGAAGACTTGCGAAGCGCTGGGGCCATCTaGTTGGTGAGTGTGCCGGCCACGATCATGACGTCG +
Preference number: 6 (lower is better)
Translates to: GRREDLRSAGAI*LVSVPATIMTS
Trigger: CGACGTCATGATCGTGGCCGGCACACTCACCAACAAGATGGCCCCAGCGCTTCGCAAGTCTTCCCTACGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620479.4
CDS GCA 72 bp GAGCTCAGTCTGGGATGTAGATGTCCACGGGCACGATaGGGTCGCAGCCCCTCACCACCGAGTAGGAATAGT +
Preference number: 6 (lower is better)
Translates to: ELSLGCRCPRAR*GRSPSPPSRNS
Trigger: ACTATTCCTACTCGGTGGTGAGGGGCTGCGACCGCATCGTGCCCGTGGACATCTACATCCCAGACTGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539480.5
ENST00000540530.5
CDS CCA 72 bp CACCTGCCCGCCAGAAGCCTGTGTTGGGACGGCCGCTaGCCATGTCTCAGGTTCCCTCCATTAGAAACTATC +
Preference number: 6 (lower is better)
Translates to: HLPARSLCWDGR*PCLRFPPLETI
Trigger: GATAGTTTCTAATGGAGGGAACCTGAGACATGGCCAGCGGCCGTCCCAACACAGGCTTCTGGCGGGCAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436115.6
CDS TCA 72 bp GCACCTACGAGGCTGGAACTTGTCACGGAGAAGCAATaGGCAAACACGCACAGGCTCCCAGAGCCTCTGTGG +
Preference number: 6 (lower is better)
Translates to: APTRLELVTEKQ*ANTHRLPEPLW
Trigger: CCACAGAGGCTCTGGGAGCCTGTGCGTGTTTGCTCATTGCTTCTCCGTGACAAGTTCCAGCCTCGTAGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591358.1
CDS CCA 72 bp ACCCGCCTTCAACTGCAGGCCAGGCACCTACGAGGCTaGAACTTGTCACGGAGAAGCAATGAGCAAACACGC +
Preference number: 6 (lower is better)
Translates to: TRLQLQARHLRG*NLSRRSNEQTR
Trigger: GCGTGTTTGCTCATTGCTTCTCCGTGACAAGTTCCAGCCTCGTAGGTGCCTGGCCTGCAGTTGAAGGCGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591358.1
CDS CAA 72 bp CTTCAACTGCAGGCCAGGCACCTACGAGGCTGGAACTaGTCACGGAGAAGCAATGAGCAAACACGCACAGGC +
Preference number: 6 (lower is better)
Translates to: LQLQARHLRGWN*SRRSNEQTRTG
Trigger: GCCTGTGCGTGTTTGCTCATTGCTTCTCCGTGACAAGTTCCAGCCTCGTAGGTGCCTGGCCTGCAGTTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591358.1
CDS TCA 72 bp AGAAACAAGAGGAACACACGGACGCCAGAAAGAGAATaGCGGAAACGGAGGGGTCATCTCCAGCAGGGTCCG +
Preference number: 6 (lower is better)
Translates to: RNKRNTRTPERE*RKRRGHLQQGP
Trigger: CGGACCCTGCTGGAGATGACCCCTCCGTTTCCGTCATTCTCTTTCTGGCGTCCGTGTGTTCCTCTTGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436115.6
CDS TCA 72 bp AAAGGAAACAGTGAACGTCCATCAATGGGGGATTGTTaGACCCGGGCTGTCGCAGCAAGTGCCGCAGGAGCT +
Preference number: 6 (lower is better)
Translates to: KGNSERPSMGDC*TRAVAASAAGA
Trigger: AGCTCCTGCGGCACTTGCTGCGACAGCCCGGGTTCAACAATCCCCCATTGATGGACGTTCACTGTTTCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436115.6
CDS TCA 72 bp GCATGTGTGCGAGTGTGCATATGTGCATTGTGTGCGTaGGTGTGCGTGTGGTCCGTGTACACATCTGTCCAT +
Preference number: 6 (lower is better)
Translates to: ACVRVCICALCA*VCVWSVYTSVH
Trigger: ATGGACAGATGTGTACACGGACCACACGCACACTCACGCACACAATGCACATATGCACACTCGCACACATGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436115.6
CDS GCA 72 bp CTATCCTGCATTAAAAACTATCCTTGTCTCGACCACTaGGGCCCTGGCAGGACGTTCGCCGTGGCATTGTTT +
Preference number: 6 (lower is better)
Translates to: LSCIKNYPCLDH*GPGRTFAVALF
Trigger: AAACAATGCCACGGCGAACGTCCTGCCAGGGCCGCAGTGGTCGAGACAAGGATAGTTTTTAATGCAGGATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436115.6
CDS TCA 72 bp TGCATGTGTCCACACAAGGACGTGTGTGCATGTGTGTaGGTGTGCATGTGTGTGCATGACTGTGCATATATG +
Preference number: 6 (lower is better)
Translates to: CMCPHKDVCACV*VCMCVHDCAYM
Trigger: CATATATGCACAGTCATGCACACACATGCACACTCACACACATGCACACACGTCCTTGTGTGGACACATGCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436115.6
CDS CCA 72 bp AGCCGTAAAAATGGACATACCCTGAATGCCCAGCAGTaGGAGACGGTTATGAAAACTCTGGAATATTCTAAT +
Preference number: 6 (lower is better)
Translates to: SRKNGHTLNAQQ*ETVMKTLEYSN
Trigger: ATTAGAATATTCCAGAGTTTTCATAACCGTCTCCCACTGCTGGGCATTCAGGGTATGTCCATTTTTACGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591358.1
CDS TCA 72 bp AGCCACATTCAAATACATAAAATAGAGAGAAACGGGTaGGATCTGTCCTCATCACATAGTTCCTCGAACCCA +
Preference number: 6 (lower is better)
Translates to: SHIQIHKIERNG*DLSSSHSSSNP
Trigger: TGGGTTCGAGGAACTATGTGATGAGGACAGATCTCACCCGTTTCTCTCTATTTTATGTATTTGAATGTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436115.6