Pregenerated sensors for NDUFS6 (Homo sapiens)

Ensembl gene IDs: ENSG00000145494

Ensembl transcript IDs: ENST00000274137.10

Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR GCA 90 bp	TTCAGCACCAGGAATACCCTTCGCACAGAACCAGCGAGCTTCACGTaGTCAGCTTCCCCGCGGAAATGCTCACAGGATGCTGCGGGACCC	+
Preference number: 1 (lower is better) Translates to: FSTRNTLRTEPASFT*SASPRKCSQDAAGP Trigger: GGGTCCCGCAGCATCCTGTGAGCATTTCCGCGGGGAAGCTGAGCACGTGAAGCTCGCTGGTTCTGTGCGAAGGGTATTCCTGGTGCTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000274137.10
3UTR GCA 72 bp	AGGAATACCCTTCGCACAGAACCAGCGAGCTTCACGTaGTCAGCTTCCCCGCGGAAATGCTCACAGGATGCT	+
Preference number: 3 (lower is better) Translates to: RNTLRTEPASFT*SASPRKCSQDA Trigger: AGCATCCTGTGAGCATTTCCGCGGGGAAGCTGAGCACGTGAAGCTCGCTGGTTCTGTGCGAAGGGTATTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000274137.10
CDS-3UTR TCA 90 bp	CCAGCGAGCTTCACGTGCTCAGCTTCCCCGCGGAAATGCTCACAGGATGCTGCGCCTGGCCAGTGTGCGTaGCCTTCTCCCCGGTCGGCG	+
Preference number: 4 (lower is better) Translates to: PASFTCSASPRKCSQDAAPGQCA*PSPRSA Trigger: CGCCGACCGGGGAGAAGGTCACGCACACTGGCCAGG...CGCAGCATCCTGTGAGCATTTCCGCGGGGAAGCTGAGCACGTGAAGCTCGCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000274137.10
CDS-3UTR CCA 90 bp	CCTTCGCACAGAACCAGCGAGCTTCACGTGCTCAGCTTCCCCGCGGAAATGCTCGCACCCCGAAACACCTaGCGCCCAGGGGCAGGCTCC	+
Preference number: 4 (lower is better) Translates to: PSHRTSELHVLSFPAEMLAPRNT*RPGAGS Trigger: GGAGCCTGCCCCTGGGCGCCAGGTGTTTCGGGGTGC...GAGCATTTCCGCGGGGAAGCTGAGCACGTGAAGCTCGCTGGTTCTGTGCGAAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000274137.10
CDS-3UTR GCA 90 bp	TTCCCCGCGGAAATGCTCACAGGATGCTGCGGGACCCCCGGCGTGCCACACGCTACCTCGCTCACGGGCTaGTCTGCTATCAAATCAATG	+
Preference number: 4 (lower is better) Translates to: FPAEMLTGCCGTPGVPHATSLTG*SAIKSM Trigger: CATTGATTTGATAGCAGAGCAGCCCGTGAGCGAGGT...AGCGTGTGGCACGCCGGGGGTCCCGCAGCATCCTGTGAGCATTTCCGCGGGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000274137.10
CDS-3UTR GCA 90 bp	CACCAGGAATACCCTTCGCACAGAACCAGCGAGCTTCACGTGCTCAGCTTCCCCGAAATGCTCACAGGATaGTGCGGGACCCCCGGCGTG	+
Preference number: 4 (lower is better) Translates to: HQEYPSHRTSELHVLSFPEMLTG*CGTPGV Trigger: CACGCCGGGGGTCCCGCAGCATCCTGTGAGCATTTC...GGGGAAGCTGAGCACGTGAAGCTCGCTGGTTCTGTGCGAAGGGTATTCCTGGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000274137.10
CDS-3UTR GCA 90 bp	TTCAGCACCAGGAATACCCTTCGCACAGAACCAGCGAGCTTCACGTGCTCAGCTCCAGCGAGCTTCACGTaGTCAGCTTCCCCGCGGAAA	+
Preference number: 4 (lower is better) Translates to: FSTRNTLRTEPASFTCSAPASFT*SASPRK Trigger: TTTCCGCGGGGAAGCTGAGCACGTGAAGCTCGCTGG...AGCTGAGCACGTGAAGCTCGCTGGTTCTGTGCGAAGGGTATTCCTGGTGCTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000274137.10
CDS-3UTR GCA 90 bp	TTGACAGCAACACCCTTTATTCAGCACCAGGAATACCCTTCGCACAGAACCAGCATGCTCACAGGATGCTaGGGGACCCCCGGCGTGCCA	+
Preference number: 4 (lower is better) Translates to: LTATPFIQHQEYPSHRTSMLTGC*GTPGVP Trigger: TGGCACGCCGGGGGTCCCGCAGCATCCTGTGAGCAT...GCTGGTTCTGTGCGAAGGGTATTCCTGGTGCTGAATAAAGGGTGTTGCTGTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000274137.10
CDS-3UTR TCA 90 bp	TTCAGCACCAGGAATACCCTTCGCACAGAACCAGCGAGCTTCACGTGCTCAGCTAGTGGTGGTGCTGTCTaGACTGGAGCCCACAGTAAC	+
Preference number: 4 (lower is better) Translates to: FSTRNTLRTEPASFTCSASGGAV*TGAHSN Trigger: GTTACTGTGGGCTCCAGTTCAGACAGCACCACCACT...AGCTGAGCACGTGAAGCTCGCTGGTTCTGTGCGAAGGGTATTCCTGGTGCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274137.10
CDS-3UTR GCA 90 bp	AGCACCAGGAATACCCTTCGCACAGAACCAGCGAGCTTCACGTGCTCAGCTTCCGCTCACGGGCTGCTCTaGTATCAAATCAATGGCAAA	+
Preference number: 4 (lower is better) Translates to: STRNTLRTEPASFTCSASAHGLL*YQINGK Trigger: TTTGCCATTGATTTGATAGCAGAGCAGCCCGTGAGC...GGAAGCTGAGCACGTGAAGCTCGCTGGTTCTGTGCGAAGGGTATTCCTGGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274137.10
CDS-3UTR CCA 90 bp	CCAGCGAGCTTCACGTGCTCAGCTTCCCCGCGGAAATGCTCACAGGATGCTGCGCTGCTATCAAATCAATaGCAAAGTTTTCATTCACCT	+
Preference number: 4 (lower is better) Translates to: PASFTCSASPRKCSQDAALLSNQ*QSFHSP Trigger: AGGTGAATGAAAACTTTGCCATTGATTTGATAGCAG...CGCAGCATCCTGTGAGCATTTCCGCGGGGAAGCTGAGCACGTGAAGCTCGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000274137.10
CDS GCA 90 bp	AGCGAGCTTCACGTGCTCAGCTTCCCCGCGGAAATGCTCACAGGATaGTGCGGGACCCCCGGCGTGCCACACGCTCTAGTGGTGGTGCTG	+
Preference number: 5 (lower is better) Translates to: SELHVLSFPAEMLTG*CGTPGVPHALVVVL Trigger: CAGCACCACCACTAGAGCGTGTGGCACGCCGGGGGTCCCGCAGCATCCTGTGAGCATTTCCGCGGGGAAGCTGAGCACGTGAAGCTCGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000274137.10
CDS GCA 72 bp	CACGTGCTCAGCTTCCCCGCGGAAATGCTCACAGGATaGTGCGGGACCCCCGGCGTGCCACACGCTCTAGTG	+
Preference number: 6 (lower is better) Translates to: HVLSFPAEMLTG*CGTPGVPHALV Trigger: CACTAGAGCGTGTGGCACGCCGGGGGTCCCGCAGCATCCTGTGAGCATTTCCGCGGGGAAGCTGAGCACGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000274137.10

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