Pregenerated sensors for NDUFB3 (Homo sapiens)
Ensembl gene IDs: ENSG00000119013Ensembl transcript IDs: ENST00000450023.6, ENST00000454214.1, ENST00000682325.1, ENST00000684175.1, ENST00000684420.1
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GCTGCTGCGGGAGGCGGCGGCGGTAGGAAGCCGGAGACAGCAGGGTaGCAGGTAGGCGGCGGTGCTGTCTTTGGGGGAGGCAAAGTGCTA | + |
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Preference number: 5 (lower is better) Translates to: AAAGGGGGRKPETAG*QVGGGAVFGGGKVL Trigger: TAGCACTTTGCCTCCCCCAAAGACAGCACCGCCGCCTACCTGTCACCCTGCTGTCTCCGGCTTCCTACCGCCGCCGCCTCCCGCAGCAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000450023.6 |
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| CDS CCA 90 bp | TCCTTCGGCCGCGGAAACTACAGACGGGAGCTGGCGAGGGTGGTCTaGAAAGGCGGTAGCCGGTGTGTTGGTGGTCCCGGAACCTCTCGT | + |
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Preference number: 5 (lower is better) Translates to: SFGRGNYRRELARVV*KGGSRCVGGPGTSR Trigger: ACGAGAGGTTCCGGGACCACCAACACACCGGCTACCGCCTTTCCAGACCACCCTCGCCAGCTCCCGTCTGTAGTTTCCGCGGCCGAAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450023.6 |
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| CDS CCA 90 bp | TCTTCTCCTTCGGCCGCGGAAACTACAGACGGGAGCTGGCGAGGGTaGTCTGGAAAGGCGGTAGCCGGTGTGTTGGTGGTCCCGGAACCT | + |
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Preference number: 5 (lower is better) Translates to: SSPSAAETTDGSWRG*SGKAVAGVLVVPEP Trigger: AGGTTCCGGGACCACCAACACACCGGCTACCGCCTTTCCAGACCACCCTCGCCAGCTCCCGTCTGTAGTTTCCGCGGCCGAAGGAGAAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450023.6 |
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| CDS CCA 90 bp | GAGGGGTTTTCTTCTCCTTCGGCCGCGGAAACTACAGACGGGAGCTaGCGAGGGTGGTCTGGAAAGGCGGTAGCCGGTGTGTTGGTGGTC | + |
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Preference number: 5 (lower is better) Translates to: EGFSSPSAAETTDGS*RGWSGKAVAGVLVV Trigger: GACCACCAACACACCGGCTACCGCCTTTCCAGACCACCCTCGCCAGCTCCCGTCTGTAGTTTCCGCGGCCGAAGGAGAAGAAAACCCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000450023.6 |
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| CDS GCA 90 bp | TCATGTCCATGTTCATGGGCCATGTCCAATGAGAGGGTTGGTTGTTaGGCTGCAGTTGGCAGGCTGCTGCGGGAGGCGGCGGCGGTAGGA | + |
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Preference number: 5 (lower is better) Translates to: SCPCSWAMSNERVGC*AAVGRLLREAAAVG Trigger: TCCTACCGCCGCCGCCTCCCGCAGCAGCCTGCCAACTGCAGCGCAACAACCAACCCTCTCATTGGACATGGCCCATGAACATGGACATGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450023.6 |
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| CDS TCA 90 bp | TTTATGATGTCCATGCTCATGTCCATGTTCATGGGCCATGTCCAATaGGAGGGTTGGTTGTTGCGCTGCAGTTGGCAGGCTGCTGCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: FMMSMLMSMFMGHVQ*EGWLLRCSWQAAAG Trigger: TCCCGCAGCAGCCTGCCAACTGCAGCGCAACAACCAACCCTCTCATTGGACATGGCCCATGAACATGGACATGAGCATGGACATCATAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450023.6 |
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| CDS GCA 90 bp | GCTGTTCTTCTGCCTTTGCGATCCAAAGGCAAACAAAGACAATTTTaGGTGTGGCAGAAGCGGGAACAAGCACCTGACAGCAATCTGACC | + |
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Preference number: 5 (lower is better) Translates to: AVLLPLRSKGKQRQF*VWQKREQAPDSNLT Trigger: GGTCAGATTGCTGTCAGGTGCTTGTTCCCGCTTCTGCCACACGCAAAATTGTCTTTGTTTGCCTTTGGATCGCAAAGGCAGAAGAACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454214.1 |
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| CDS GCA 90 bp | GCTGTTCTTCTGCCTTTGCGATCCAAAGGCAAACAAAGACAATTTTaGGTGTGGCAGAAGCGGGAACAAGCACCTGGATTTAACAACTAC | + |
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Preference number: 5 (lower is better) Translates to: AVLLPLRSKGKQRQF*VWQKREQAPGFNNY Trigger: GTAGTTGTTAAATCCAGGTGCTTGTTCCCGCTTCTGCCACACGCAAAATTGTCTTTGTTTGCCTTTGGATCGCAAAGGCAGAAGAACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000682325.1 ENST00000684420.1 |
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| CDS CCA 90 bp | ATGATGTCCATGCTCATGTCCATGTTCATGGGCCATGTCTCTTGGTaGAGGAGATGGAATCACAGAAACATACTGGGAGATTCTAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: MMSMLMSMFMGHVSW*RRWNHRNILGDSKA Trigger: TGCCTTAGAATCTCCCAGTATGTTTCTGTGATTCCATCTCCTCCACCAAGAGACATGGCCCATGAACATGGACATGAGCATGGACATCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000682325.1 ENST00000684175.1 |
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| CDS CCA 90 bp | ATGCTCATGTCCATGTTCATGGGCCATGTCTCTTGGTGGAGGAGATaGAATCACAGAAACATACTGGGAGATTCTAAGGCAGTGTTTTTC | + |
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Preference number: 5 (lower is better) Translates to: MLMSMFMGHVSWWRR*NHRNILGDSKAVFF Trigger: GAAAAACACTGCCTTAGAATCTCCCAGTATGTTTCTGTGATTCCATCTCCTCCACCAAGAGACATGGCCCATGAACATGGACATGAGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000682325.1 ENST00000684175.1 |
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| CDS CCA 90 bp | CTTCTGCCTTTGCGATCCAAAGGCAAACAAAGACAATTTTGCGTGTaGCAGAAGCGGGAACAAGCACCTGGATTTAACAACTACAGTAAT | + |
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Preference number: 5 (lower is better) Translates to: LLPLRSKGKQRQFCV*QKREQAPGFNNYSN Trigger: ATTACTGTAGTTGTTAAATCCAGGTGCTTGTTCCCGCTTCTGCCACACGCAAAATTGTCTTTGTTTGCCTTTGGATCGCAAAGGCAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000682325.1 ENST00000684420.1 |
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| CDS TCA 72 bp | GGAGGCGGCGGCGGTAGGAAGCCGGAGACAGCAGGGTaGCAGGTAGGCGGCGGTGCTGTCTTTGGGGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: GGGGGRKPETAG*QVGGGAVFGGG Trigger: GCCTCCCCCAAAGACAGCACCGCCGCCTACCTGTCACCCTGCTGTCTCCGGCTTCCTACCGCCGCCGCCTCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000450023.6 |
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| CDS CCA 72 bp | CGCGGAAACTACAGACGGGAGCTGGCGAGGGTGGTCTaGAAAGGCGGTAGCCGGTGTGTTGGTGGTCCCGGA | + |
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Preference number: 6 (lower is better) Translates to: RGNYRRELARVV*KGGSRCVGGPG Trigger: TCCGGGACCACCAACACACCGGCTACCGCCTTTCCAGACCACCCTCGCCAGCTCCCGTCTGTAGTTTCCGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450023.6 |
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| CDS CCA 72 bp | TCGGCCGCGGAAACTACAGACGGGAGCTGGCGAGGGTaGTCTGGAAAGGCGGTAGCCGGTGTGTTGGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: SAAETTDGSWRG*SGKAVAGVLVV Trigger: GACCACCAACACACCGGCTACCGCCTTTCCAGACCACCCTCGCCAGCTCCCGTCTGTAGTTTCCGCGGCCGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450023.6 |
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| CDS CCA 72 bp | TCTTCTCCTTCGGCCGCGGAAACTACAGACGGGAGCTaGCGAGGGTGGTCTGGAAAGGCGGTAGCCGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: SSPSAAETTDGS*RGWSGKAVAGV Trigger: CACACCGGCTACCGCCTTTCCAGACCACCCTCGCCAGCTCCCGTCTGTAGTTTCCGCGGCCGAAGGAGAAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450023.6 |
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| CDS CAA 90 bp | GACGGGAGCTGGCGAGGGTGGTCTGGAAAGGCGGTAGCCGGTGTGTaGGTGGTCCCGGAACCTCTCGTAAACCAGGTAGCATCTTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: DGSWRGWSGKAVAGV*VVPEPLVNQVASWE Trigger: CTCCCAAGATGCTACCTGGTTTACGAGAGGTTCCGGGACCACCAACACACCGGCTACCGCCTTTCCAGACCACCCTCGCCAGCTCCCGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450023.6 |
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| CDS GCA 72 bp | TGTTCATGGGCCATGTCCAATGAGAGGGTTGGTTGTTaGGCTGCAGTTGGCAGGCTGCTGCGGGAGGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: CSWAMSNERVGC*AAVGRLLREAA Trigger: CGCCGCCTCCCGCAGCAGCCTGCCAACTGCAGCGCAACAACCAACCCTCTCATTGGACATGGCCCATGAACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450023.6 |
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| CDS CAA 90 bp | GTCCATGCTCATGTCCATGTTCATGGGCCATGTCCAATGAGAGGGTaGGTTGTTGCGCTGCAGTTGGCAGGCTGCTGCGGGAGGCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: VHAHVHVHGPCPMRG*VVALQLAGCCGRRR Trigger: CCGCCGCCTCCCGCAGCAGCCTGCCAACTGCAGCGCAACAACCAACCCTCTCATTGGACATGGCCCATGAACATGGACATGAGCATGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450023.6 |
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| CDS CAA 72 bp | TGGCGAGGGTGGTCTGGAAAGGCGGTAGCCGGTGTGTaGGTGGTCCCGGAACCTCTCGTAAACCAGGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: WRGWSGKAVAGV*VVPEPLVNQVA Trigger: TGCTACCTGGTTTACGAGAGGTTCCGGGACCACCAACACACCGGCTACCGCCTTTCCAGACCACCCTCGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450023.6 |
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| CDS CAA 72 bp | CATGTCCATGTTCATGGGCCATGTCCAATGAGAGGGTaGGTTGTTGCGCTGCAGTTGGCAGGCTGCTGCGGG | + |
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Preference number: 6 (lower is better) Translates to: HVHVHGPCPMRG*VVALQLAGCCG Trigger: CCCGCAGCAGCCTGCCAACTGCAGCGCAACAACCAACCCTCTCATTGGACATGGCCCATGAACATGGACATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450023.6 |
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| CDS TCA 72 bp | TCCATGCTCATGTCCATGTTCATGGGCCATGTCCAATaGGAGGGTTGGTTGTTGCGCTGCAGTTGGCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: SMLMSMFMGHVQ*EGWLLRCSWQA Trigger: AGCCTGCCAACTGCAGCGCAACAACCAACCCTCTCATTGGACATGGCCCATGAACATGGACATGAGCATGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450023.6 |
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| CDS CCA 72 bp | TCCATGTTCATGGGCCATGTCTCTTGGTGGAGGAGATaGAATCACAGAAACATACTGGGAGATTCTAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: SMFMGHVSWWRR*NHRNILGDSKA Trigger: TGCCTTAGAATCTCCCAGTATGTTTCTGTGATTCCATCTCCTCCACCAAGAGACATGGCCCATGAACATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000682325.1 ENST00000684175.1 |
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| CDS CCA 72 bp | ATGCTCATGTCCATGTTCATGGGCCATGTCTCTTGGTaGAGGAGATGGAATCACAGAAACATACTGGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: MLMSMFMGHVSW*RRWNHRNILGD Trigger: ATCTCCCAGTATGTTTCTGTGATTCCATCTCCTCCACCAAGAGACATGGCCCATGAACATGGACATGAGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000682325.1 ENST00000684175.1 |
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| CDS CAA 90 bp | TCCATGTTCATGGGCCATGTTTTTAGTGATGCTGTTCTTCTGCCTTaGCGATCCAAAGGCAAACAAAGACAATTTTGCGTGTGGCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: SMFMGHVFSDAVLLP*RSKGKQRQFCVWQK Trigger: CTTCTGCCACACGCAAAATTGTCTTTGTTTGCCTTTGGATCGCAAAGGCAGAAGAACAGCATCACTAAAAACATGGCCCATGAACATGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000454214.1 ENST00000684420.1 |
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| CDS TCA 72 bp | CAAGCACCTGGATTTAACAACTACAGTAATGATCACTaGATCCTCCAACCACCTCTTCCTACCCCAACTCTA | + |
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Preference number: 6 (lower is better) Translates to: QAPGFNNYSNDH*ILQPPLPTPTL Trigger: TAGAGTTGGGGTAGGAAGAGGTGGTTGGAGGATTCAGTGATCATTACTGTAGTTGTTAAATCCAGGTGCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000682325.1 ENST00000684420.1 |
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