Pregenerated sensors for NDUFB11 (Homo sapiens)
Ensembl gene IDs: ENSG00000147123Ensembl transcript IDs: ENST00000276062.8, ENST00000377811.4
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CTTTCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGGAAGGCGGTGCTTCTTaGGCCCCACTTAGCAACTGG | + |
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Preference number: 2 (lower is better) Translates to: LSAPLIRCSEKRSEWQAGEGGAS*APLSNW Trigger: CCAGTTGCTAAGTGGGGCTCAAGAAGCACCGCCTTC...CCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000276062.8 ENST00000377811.4 |
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| CDS-3UTR GCA 90 bp | TCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGGGTCCCTCGCGTCGCCGCTaGCGCCAAAAGACGGCGAGC | + |
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Preference number: 4 (lower is better) Translates to: SAPLIRCSEKRSEWQAGGPSRRR*RQKTAS Trigger: GCTCGCCGTCTTTTGGCGGCAGCGGCGACGCGAGGG...ACCCCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000276062.8 ENST00000377811.4 |
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| CDS-3UTR GCA 90 bp | CTTTCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGCCCTCGCGTCGCCGCTaGCGCCAAAAGACGGCGAGC | + |
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Preference number: 4 (lower is better) Translates to: LSAPLIRCSEKRSEWQAGPSRRR*RQKTAS Trigger: GCTCGCCGTCTTTTGGCGGCAGCGGCGACGCGAGGG...CCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000276062.8 ENST00000377811.4 |
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| CDS-3UTR GCA 90 bp | CTTTCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGGCGACTGTGCGCAGCTaGAGTGGGTGCGAGCGCGAC | + |
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Preference number: 4 (lower is better) Translates to: LSAPLIRCSEKRSEWQAGATVRS*SGCERD Trigger: GTCGCGCTCGCACCCACTGCAGCTGCGCACAGTCGC...CCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276062.8 |
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| CDS-3UTR CCA 90 bp | CTTTCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGCGGTGTGGTCGGTTCTaGGGGCCGCTTTCCCGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LSAPLIRCSEKRSEWQAGRCGRF*GPLSRH Trigger: GTGGCGGGAAAGCGGCCCCCAGAACCGACCACACCG...CCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000276062.8 ENST00000377811.4 |
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| CDS-3UTR CCA 90 bp | TCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGGGTCCTCTTGCCACGGTGTaGTCGGTTCTGGGGGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: SAPLIRCSEKRSEWQAGGPLATV*SVLGAA Trigger: AGCGGCCCCCAGAACCGACCACACCGTGGCAAGAGG...ACCCCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000276062.8 ENST00000377811.4 |
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| CDS-3UTR GCA 90 bp | TCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGGGTCGCAGCTGCAGTGGGTaGGAGCGCGACAATCATCGC | + |
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Preference number: 4 (lower is better) Translates to: SAPLIRCSEKRSEWQAGGRSCSG*ERDNHR Trigger: GCGATGATTGTCGCGCTCGCACCCACTGCAGCTGCG...ACCCCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000276062.8 |
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| CDS-3UTR CCA 90 bp | CTTTCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGCCTCTTGCCACGGTGTaGTCGGTTCTGGGGGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSAPLIRCSEKRSEWQAGPLATV*SVLGAA Trigger: AGCGGCCCCCAGAACCGACCACACCGTGGCAAGAGG...CCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGAAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000276062.8 ENST00000377811.4 |
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| CDS-3UTR TCA 90 bp | CTTTCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGACAGCCCAGCCGCCATaGCAGATGGTGCTGCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: LSAPLIRCSEKRSEWQAGTAQPP*QMVLQG Trigger: ACCCTGCAGCACCATCTGTCATGGCGGCTGGGCTGT...CCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000276062.8 ENST00000377811.4 |
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| CDS-3UTR GCA 90 bp | CTTTCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGCGCCATGACAGATGGTaGTGCAGGGTCTCAGGGGCG | + |
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Preference number: 4 (lower is better) Translates to: LSAPLIRCSEKRSEWQAGRHDRW*CRVSGA Trigger: CGCCCCTGAGACCCTGCAGCACCATCTGTCATGGCG...CCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276062.8 |
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| CDS-3UTR TCA 90 bp | CTTTCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGAATGAGGCGGGGCGTTaGGCAACCCTCTTTGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: LSAPLIRCSEKRSEWQAGNEAGR*ATLFAS Trigger: GGAGGCAAAGAGGGTTGCTCAACGCCCCGCCTCATT...CCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276062.8 |
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| CDS-3UTR TCA 90 bp | TCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGGGTGAAGGCGGTGCTTCTTaGGCCCCACTTAGCAACTGG | + |
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Preference number: 4 (lower is better) Translates to: SAPLIRCSEKRSEWQAGGEGGAS*APLSNW Trigger: CCAGTTGCTAAGTGGGGCTCAAGAAGCACCGCCTTC...ACCCCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000276062.8 ENST00000377811.4 |
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| CDS-3UTR GCA 90 bp | CTTTCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGGGGCGGGGAAAGAAATaGGACTGTGCGCAGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: LSAPLIRCSEKRSEWQAGGRGKK*DCAQLQ Trigger: CTGCAGCTGCGCACAGTCGCATTTCTTTCCCCGCCC...CCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGAAAG 56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000276062.8 |
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| CDS-3UTR GCA 90 bp | TCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGGGTGGTTCTGGGTCCTCTTaGCACGGTGTGGTCGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: SAPLIRCSEKRSEWQAGGGSGSS*HGVVGS Trigger: AGAACCGACCACACCGTGGCAAGAGGACCCAGAACC...ACCCCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000276062.8 ENST00000377811.4 |
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| CDS-3UTR CCA 90 bp | TCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGGGTAGTTCCCTCGCCCACTaGGGAAAGAGGCAGAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: SAPLIRCSEKRSEWQAGGSSLAH*GKRQSF Trigger: GAAGCTCTGCCTCTTTCCCCAGTGGGCGAGGGAACT...ACCCCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000276062.8 |
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| CDS-3UTR CCA 90 bp | TCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGGGTGTTGTCGTGGCTTCGTaGGGCCAACCATTTTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: SAPLIRCSEKRSEWQAGGVVVAS*GQPFSA Trigger: GGCCGAAAATGGTTGGCCCCACGAAGCCACGACAAC...ACCCCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000276062.8 |
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| CDS-3UTR CCA 90 bp | TCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGGGTTGCCTCCAGTTGTCGTaGCTTCGTGGGGCCAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: SAPLIRCSEKRSEWQAGGCLQLS*LRGANH Trigger: ATGGTTGGCCCCACGAAGCCACGACAACTGGAGGCA...ACCCCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000276062.8 |
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| CDS-3UTR CCA 90 bp | CTTTCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGTGTGCGCAGCTGCAGTaGGTGCGAGCGCGACAATCA | + |
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Preference number: 4 (lower is better) Translates to: LSAPLIRCSEKRSEWQAGCAQLQ*VRARQS Trigger: TGATTGTCGCGCTCGCACCCACTGCAGCTGCGCACA...CCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276062.8 |
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| CDS-3UTR CCA 90 bp | TCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGGGTTTCGTCCTCGGGTTCTaGGTCCTCTTGCCACGGTGT | + |
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Preference number: 4 (lower is better) Translates to: SAPLIRCSEKRSEWQAGGFVLGF*VLLPRC Trigger: ACACCGTGGCAAGAGGACCCAGAACCCGAGGACGAA...ACCCCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000276062.8 ENST00000377811.4 |
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| CDS-3UTR CCA 90 bp | CTTTCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGCCCATCCCACGCTCTTaGACACCCTGTGCACCTGTA | + |
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Preference number: 4 (lower is better) Translates to: LSAPLIRCSEKRSEWQAGPIPRS*TPCAPV Trigger: TACAGGTGCACAGGGTGTCCAAGAGCGTGGGATGGG...CCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276062.8 |
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| CDS-3UTR CCA 90 bp | TCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGGGTTGGTCACTCATCCTCTaGCAGCTGGATCTTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SAPLIRCSEKRSEWQAGGWSLIL*QLDLAG Trigger: CCCAGCAAGATCCAGCTGCCAGAGGATGAGTGACCA...ACCCCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000276062.8 ENST00000377811.4 |
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| CDS-3UTR GCA 90 bp | CTTTCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGAAAGAAATGCGACTGTaGGCAGCTGCAGTGGGTGCG | + |
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Preference number: 4 (lower is better) Translates to: LSAPLIRCSEKRSEWQAGKEMRL*AAAVGA Trigger: CGCACCCACTGCAGCTGCGCACAGTCGCATTTCTTT...CCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276062.8 |
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| CDS-3UTR GCA 90 bp | TCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGGGTCTCTTGGACACCCTGTaGACCTGTAGTCAGGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: SAPLIRCSEKRSEWQAGGLLDTL*TCSQAD Trigger: ATCTGCCTGACTACAGGTGCACAGGGTGTCCAAGAG...ACCCCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000276062.8 |
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| CDS-3UTR CCA 90 bp | CTTTCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGTGGTCACTCATCCTCTaGCAGCTGGATCTTGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: LSAPLIRCSEKRSEWQAGWSLIL*QLDLAG Trigger: CCCAGCAAGATCCAGCTGCCAGAGGATGAGTGACCA...CCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000276062.8 ENST00000377811.4 |
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| CDS-3UTR TCA 90 bp | CTTTCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGGATTTGGTTTTCCAATaGGGCGGGGCGTTGAGCAAC | + |
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Preference number: 4 (lower is better) Translates to: LSAPLIRCSEKRSEWQAGDLVFQ*GGALSN Trigger: GTTGCTCAACGCCCCGCCTCATTGGAAAACCAAATC...CCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000276062.8 |
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| CDS-3UTR GCA 90 bp | TCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGGGTTTGAGCAACCCTCTTTaGCTCCAGTTGTCGTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: SAPLIRCSEKRSEWQAGGLSNPL*LQLSWL Trigger: AAGCCACGACAACTGGAGGCAAAGAGGGTTGCTCAA...ACCCCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000276062.8 |
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| CDS-3UTR CCA 90 bp | TCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGGGTGTCCCAGATCTGATTTaGTTTTCCAATGAGGCGGGG | + |
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Preference number: 4 (lower is better) Translates to: SAPLIRCSEKRSEWQAGGVPDLI*FSNEAG Trigger: CCCCGCCTCATTGGAAAACCAAATCAGATCTGGGAC...ACCCCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000276062.8 |
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| CDS-3UTR CCA 90 bp | TCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGGGTGAAATCGGTGACATTTaGGTGGATACAGTTCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: SAPLIRCSEKRSEWQAGGEIGDI*VDTVPS Trigger: GCTGGGAACTGTATCCACCCAAATGTCACCGATTTC...ACCCCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000276062.8 |
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| CDS-3UTR GCA 90 bp | TCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGGGTGCCCCTTTAATTAGGTaGTCTGAGAAGAGGTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: SAPLIRCSEKRSEWQAGGAPLIR*SEKRSE Trigger: TTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGC...ACCCCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000276062.8 ENST00000377811.4 |
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| CDS-3UTR CCA 90 bp | CTTTCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGTCGGTGACATTTGGGTaGATACAGTTCCCAGCCAAT | + |
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Preference number: 4 (lower is better) Translates to: LSAPLIRCSEKRSEWQAGSVTFG*IQFPAN Trigger: ATTGGCTGGGAACTGTATCCACCCAAATGTCACCGA...CCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276062.8 |
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| CDS-3UTR TCA 90 bp | TCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGGGTATAGGAAGAAATCGGTaGCATTTGGGTGGATACAGT | + |
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Preference number: 4 (lower is better) Translates to: SAPLIRCSEKRSEWQAGGIGRNR*HLGGYS Trigger: ACTGTATCCACCCAAATGTCACCGATTTCTTCCTAT...ACCCCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000276062.8 |
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| CDS-3UTR TCA 90 bp | CTTTCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGTATAGGTCCCAGATCTaGTTTGGTTTTCCAATGAGG | + |
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Preference number: 4 (lower is better) Translates to: LSAPLIRCSEKRSEWQAGYRSQI*FGFPMR Trigger: CCTCATTGGAAAACCAAATCAGATCTGGGACCTATA...CCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276062.8 |
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| CDS-3UTR CCA 90 bp | CTTTCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGATAACCATGGGAGTCTaGGTTCTTCTCATACAAGTT | + |
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Preference number: 4 (lower is better) Translates to: LSAPLIRCSEKRSEWQAGITMGV*VLLIQV Trigger: AACTTGTATGAGAAGAACCCAGACTCCCATGGTTAT...CCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000276062.8 ENST00000377811.4 |
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| CDS-3UTR CAA 90 bp | TCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGGGTCCTCTTTGCCTCCAGTaGTCGTGGCTTCGTGGGGCC | + |
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Preference number: 5 (lower is better) Translates to: SAPLIRCSEKRSEWQAGGPLCLQ*SWLRGA Trigger: GGCCCCACGAAGCCACGACAACTGGAGGCAAAGAGG...ACCCCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000276062.8 |
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| CDS TCA 90 bp | CCTCCGCCACGCTATATAGGTCCCAGATCTGATTTGGTTTTCCAATaGGGCGGGGCGTTGAGCAACCCTCTTTGCCTCCAGTTGTCGTGG | + |
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Preference number: 5 (lower is better) Translates to: PPPRYIGPRSDLVFQ*GGALSNPLCLQLSW Trigger: CCACGACAACTGGAGGCAAAGAGGGTTGCTCAACGCCCCGCCTCATTGGAAAACCAAATCAGATCTGGGACCTATATAGCGTGGCGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276062.8 |
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| CDS-3UTR CAA 90 bp | CTTTCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGTCCCATCCCACGCTCTaGGACACCCTGTGCACCTGT | + |
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Preference number: 5 (lower is better) Translates to: LSAPLIRCSEKRSEWQAGSHPTL*DTLCTC Trigger: ACAGGTGCACAGGGTGTCCAAGAGCGTGGGATGGGA...CCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276062.8 |
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| CDS CCA 90 bp | CGGGGCGTTGAGCAACCCTCTTTGCCTCCAGTTGTCGTGGCTTCGTaGGGCCAACCATTTTCGGCCAGGCTGAGAAATTTCTTATTGATG | + |
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Preference number: 5 (lower is better) Translates to: RGVEQPSLPPVVVAS*GQPFSARLRNFLLM Trigger: CATCAATAAGAAATTTCTCAGCCTGGCCGAAAATGGTTGGCCCCACGAAGCCACGACAACTGGAGGCAAAGAGGGTTGCTCAACGCCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276062.8 |
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| CDS-3UTR CAA 90 bp | TCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGGGTGTTGAGCAACCCTCTTaGCCTCCAGTTGTCGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: SAPLIRCSEKRSEWQAGGVEQPS*PPVVVA Trigger: AGCCACGACAACTGGAGGCAAAGAGGGTTGCTCAAC...ACCCCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000276062.8 |
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| CDS-3UTR CAA 90 bp | CTTTCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGTCTGGCAGCTGGATCTaGCTGGGGTCGAAGCAGTTG | + |
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Preference number: 5 (lower is better) Translates to: LSAPLIRCSEKRSEWQAGSGSWI*LGSKQL Trigger: CAACTGCTTCGACCCCAGCAAGATCCAGCTGCCAGA...CCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000276062.8 ENST00000377811.4 |
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| CDS-3UTR CAA 90 bp | TCAGCCCCTTTAATTAGGTGCTCTGAGAAGAGGTCAGAATGGCAGGCAGGGGGTCTGAGAAATTTCTTATaGATGGGTCTGCTCATTTCC | + |
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Preference number: 5 (lower is better) Translates to: SAPLIRCSEKRSEWQAGGLRNFL*MGLLIS Trigger: GGAAATGAGCAGACCCATCAATAAGAAATTTCTCAG...ACCCCCTGCCTGCCATTCTGACCTCTTCTCAGAGCACCTAATTAAAGGGGCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000276062.8 |
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| CDS CCA 72 bp | GGGCGGGGAAAGAAATGCGACTGTGCGCAGCTGCAGTaGGTGCGAGCGCGACAATCATCGCCCCGCCTCCGC | + |
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Preference number: 6 (lower is better) Translates to: GRGKKCDCAQLQ*VRARQSSPRLR Trigger: GCGGAGGCGGGGCGATGATTGTCGCGCTCGCACCCACTGCAGCTGCGCACAGTCGCATTTCTTTCCCCGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276062.8 |
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| CDS GCA 72 bp | GGGGAAAGAAATGCGACTGTGCGCAGCTGCAGTGGGTaGGAGCGCGACAATCATCGCCCCGCCTCCGCCACG | + |
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Preference number: 6 (lower is better) Translates to: GERNATVRSCSG*ERDNHRPASAT Trigger: CGTGGCGGAGGCGGGGCGATGATTGTCGCGCTCGCACCCACTGCAGCTGCGCACAGTCGCATTTCTTTCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276062.8 |
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| CDS GCA 72 bp | TGCAGGGTCTCAGGGGCGGGGAAAGAAATGCGACTGTaGGCAGCTGCAGTGGGTGCGAGCGCGACAATCATC | + |
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Preference number: 6 (lower is better) Translates to: CRVSGAGKEMRL*AAAVGASATII Trigger: GATGATTGTCGCGCTCGCACCCACTGCAGCTGCGCACAGTCGCATTTCTTTCCCCGCCCCTGAGACCCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276062.8 |
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| CDS CAA 72 bp | CGCGGCGGGACCACTCTTTCATCCCATCCCACGCTCTaGGACACCCTGTGCACCTGTAGTCAGGCAGATAGG | + |
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Preference number: 6 (lower is better) Translates to: RGGTTLSSHPTL*DTLCTCSQADR Trigger: CCTATCTGCCTGACTACAGGTGCACAGGGTGTCCAAGAGCGTGGGATGGGATGAAAGAGTGGTCCCGCCGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276062.8 |
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| CDS CCA 72 bp | GAGCAACCCTCTTTGCCTCCAGTTGTCGTGGCTTCGTaGGGCCAACCATTTTCGGCCAGGCTGAGAAATTTC | + |
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Preference number: 6 (lower is better) Translates to: EQPSLPPVVVAS*GQPFSARLRNF Trigger: GAAATTTCTCAGCCTGGCCGAAAATGGTTGGCCCCACGAAGCCACGACAACTGGAGGCAAAGAGGGTTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276062.8 |
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| CDS TCA 72 bp | CCAGATCTGATTTGGTTTTCCAATGAGGCGGGGCGTTaGGCAACCCTCTTTGCCTCCAGTTGTCGTGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: PDLIWFSNEAGR*ATLFASSCRGF Trigger: GAAGCCACGACAACTGGAGGCAAAGAGGGTTGCTCAACGCCCCGCCTCATTGGAAAACCAAATCAGATCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276062.8 |
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| CDS TCA 72 bp | CGCTATATAGGTCCCAGATCTGATTTGGTTTTCCAATaGGGCGGGGCGTTGAGCAACCCTCTTTGCCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: RYIGPRSDLVFQ*GGALSNPLCLQ Trigger: CTGGAGGCAAAGAGGGTTGCTCAACGCCCCGCCTCATTGGAAAACCAAATCAGATCTGGGACCTATATAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276062.8 |
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| CDS CCA 72 bp | CATTTCCTGCATAGGAAGAAATCGGTGACATTTGGGTaGATACAGTTCCCAGCCAATCGCCCCGAGTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: HFLHRKKSVTFG*IQFPANRPEFP Trigger: AGGGAACTCGGGGCGATTGGCTGGGAACTGTATCCACCCAAATGTCACCGATTTCTTCCTATGCAGGAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276062.8 |
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