Pregenerated sensors for NDUFB10 (Homo sapiens)
Ensembl gene IDs: ENSG00000140990Ensembl transcript IDs: ENST00000543683.6, ENST00000565031.1, ENST00000569148.1
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | AACTGTAGGCCCCCAGGTCCTGATCTGGGGAAGCAATaGAAACAAGCTGGGAACCGAGGCCTCTGCTACATG | + |
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Preference number: 3 (lower is better) Translates to: NCRPPGPDLGKQ*KQAGNRGLCYM Trigger: CATGTAGCAGAGGCCTCGGTTCCCAGCTTGTTTCCATTGCTTCCCCAGATCAGGACCTGGGGGCCTACAGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000543683.6 |
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| CDS-3UTR CCA 90 bp | AGCAATGGAAACAAGCTGGGAACCGAGGCCTCTGCTACATGCAAAGGGGGCAAACCGGACGCGCTGCCCTaGCCTCTACCTCCGTCCGGG | + |
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Preference number: 4 (lower is better) Translates to: SNGNKLGTEASATCKGGKPDALP*PLPPSG Trigger: CCCGGACGGAGGTAGAGGCCAGGGCAGCGCGTCCGG...TTTGCCCCCTTTGCATGTAGCAGAGGCCTCGGTTCCCAGCTTGTTTCCATTGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000543683.6 |
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| CDS-3UTR CCA 90 bp | GAAGCAATGGAAACAAGCTGGGAACCGAGGCCTCTGCTACATGCAAAGGGGGCAGGGGTTGGGGGTGGGTaGGGCACGCACAGCGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: EAMETSWEPRPLLHAKGAGVGGG*GTHSGP Trigger: AGGACCGCTGTGCGTGCCCCACCCACCCCCAACCCC...TGCCCCCTTTGCATGTAGCAGAGGCCTCGGTTCCCAGCTTGTTTCCATTGCTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000543683.6 |
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| CDS-3UTR GCA 90 bp | AGCAATGGAAACAAGCTGGGAACCGAGGCCTCTGCTACATGCAAAGGGGGCAAAACGATGGGATTGGGCTaGACCGGCGTGCGGCGCGGG | + |
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Preference number: 4 (lower is better) Translates to: SNGNKLGTEASATCKGGKTMGLG*TGVRRG Trigger: CCCGCGCCGCACGCCGGTGCAGCCCAATCCCATCGT...TTTGCCCCCTTTGCATGTAGCAGAGGCCTCGGTTCCCAGCTTGTTTCCATTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000543683.6 |
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| CDS-3UTR GCA 90 bp | GAAGCAATGGAAACAAGCTGGGAACCGAGGCCTCTGCTACATGCAAAGGGGGCAAGGGGCACCCACAGCTaGCTCAGGAGGTGGCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: EAMETSWEPRPLLHAKGARGTHS*LRRWQR Trigger: CCGCTGCCACCTCCTGAGGCAGCTGTGGGTGCCCCT...TGCCCCCTTTGCATGTAGCAGAGGCCTCGGTTCCCAGCTTGTTTCCATTGCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000543683.6 |
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| CDS-3UTR TCA 90 bp | AGAACTGTAGGCCCCCAGGTCCTGATCTGGGGAAGCAATGGAAACAAGCTGGGACCTCCTTGCACTCAGTaGTGTCTGGCACGCGGCGGT | + |
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Preference number: 4 (lower is better) Translates to: RTVGPQVLIWGSNGNKLGPPCTQ*CLARGG Trigger: ACCGCCGCGTGCCAGACATCACTGAGTGCAAGGAGG...TCCCAGCTTGTTTCCATTGCTTCCCCAGATCAGGACCTGGGGGCCTACAGTTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000543683.6 |
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| CDS-3UTR TCA 90 bp | GAAGCAATGGAAACAAGCTGGGAACCGAGGCCTCTGCTACATGCAAAGGGGGCAGGGGGCAAAGTCAAGTaGGCACAAGGGAGGGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: EAMETSWEPRPLLHAKGAGGKVK*AQGRGG Trigger: CCCTCCCCTCCCTTGTGCTCACTTGACTTTGCCCCC...TGCCCCCTTTGCATGTAGCAGAGGCCTCGGTTCCCAGCTTGTTTCCATTGCTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000543683.6 |
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| CDS-3UTR CCA 90 bp | GAAGCAATGGAAACAAGCTGGGAACCGAGGCCTCTGCTACATGCAAAGGGGGCAGCACTCAGTGATGTCTaGCACGCGGCGGTACTGCCG | + |
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Preference number: 4 (lower is better) Translates to: EAMETSWEPRPLLHAKGAALSDV*HAAVLP Trigger: CGGCAGTACCGCCGCGTGCCAGACATCACTGAGTGC...TGCCCCCTTTGCATGTAGCAGAGGCCTCGGTTCCCAGCTTGTTTCCATTGCTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000543683.6 |
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| CDS-3UTR CCA 90 bp | AGCAATGGAAACAAGCTGGGAACCGAGGCCTCTGCTACATGCAAAGGGGGCAAATGTAGACGATGGGATTaGGCTGCACCGGCGTGCGGC | + |
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Preference number: 4 (lower is better) Translates to: SNGNKLGTEASATCKGGKCRRWD*AAPACG Trigger: GCCGCACGCCGGTGCAGCCCAATCCCATCGTCTACA...TTTGCCCCCTTTGCATGTAGCAGAGGCCTCGGTTCCCAGCTTGTTTCCATTGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000543683.6 |
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| CDS-3UTR GCA 90 bp | AGAACTGTAGGCCCCCAGGTCCTGATCTGGGGAAGCAATGGAAACAAGCTGGGAGGGAACCGAGGCCTCTaGTACATGCAAAGGGGGCAA | + |
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Preference number: 4 (lower is better) Translates to: RTVGPQVLIWGSNGNKLGGNRGL*YMQRGQ Trigger: TTGCCCCCTTTGCATGTAGCAGAGGCCTCGGTTCCC...TCCCAGCTTGTTTCCATTGCTTCCCCAGATCAGGACCTGGGGGCCTACAGTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000543683.6 |
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| CDS-3UTR TCA 90 bp | AGCAATGGAAACAAGCTGGGAACCGAGGCCTCTGCTACATGCAAAGGGGGCAAATGTCCTTCCCTCTGCTaGCAGGCTTTGAGCCGATCC | + |
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Preference number: 4 (lower is better) Translates to: SNGNKLGTEASATCKGGKCPSLC*QALSRS Trigger: GGATCGGCTCAAAGCCTGTCAGCAGAGGGAAGGACA...TTTGCCCCCTTTGCATGTAGCAGAGGCCTCGGTTCCCAGCTTGTTTCCATTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000543683.6 |
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| CDS-3UTR GCA 90 bp | GAAGCAATGGAAACAAGCTGGGAACCGAGGCCTCTGCTACATGCAAAGGGGGCAAGGGGAGGGAAGATTTaGAATGGTTCTGGCCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: EAMETSWEPRPLLHAKGARGGKI*NGSGPQ Trigger: CTGGGGGCCAGAACCATTGCAAATCTTCCCTCCCCT...TGCCCCCTTTGCATGTAGCAGAGGCCTCGGTTCCCAGCTTGTTTCCATTGCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000543683.6 |
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| CDS-3UTR CCA 90 bp | AGAACTGTAGGCCCCCAGGTCCTGATCTGGGGAAGCAATGGAAACAAGCTGGGATCATCATGTAGACGATaGGATTGGGCTGCACCGGCG | + |
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Preference number: 4 (lower is better) Translates to: RTVGPQVLIWGSNGNKLGSSCRR*DWAAPA Trigger: CGCCGGTGCAGCCCAATCCCATCGTCTACATGATGA...TCCCAGCTTGTTTCCATTGCTTCCCCAGATCAGGACCTGGGGGCCTACAGTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000543683.6 |
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| CDS-3UTR CCA 90 bp | GAAGCAATGGAAACAAGCTGGGAACCGAGGCCTCTGCTACATGCAAAGGGGGCAAGGGAAGATTTGCAATaGTTCTGGCCCCCAGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: EAMETSWEPRPLLHAKGAREDLQ*FWPPGL Trigger: GAGGCCTGGGGGCCAGAACCATTGCAAATCTTCCCT...TGCCCCCTTTGCATGTAGCAGAGGCCTCGGTTCCCAGCTTGTTTCCATTGCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000543683.6 |
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| CDS-3UTR GCA 90 bp | GAAGCAATGGAAACAAGCTGGGAACCGAGGCCTCTGCTACATGCAAAGGGGGCAGAGGCCTCTGCTACATaGAAAGGGGGCAAAGTCAAG | + |
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Preference number: 4 (lower is better) Translates to: EAMETSWEPRPLLHAKGAEASAT*KGGKVK Trigger: CTTGACTTTGCCCCCTTTGCATGTAGCAGAGGCCTC...TGCCCCCTTTGCATGTAGCAGAGGCCTCGGTTCCCAGCTTGTTTCCATTGCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000543683.6 |
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| CDS-3UTR CCA 90 bp | GAAGCAATGGAAACAAGCTGGGAACCGAGGCCTCTGCTACATGCAAAGGGGGCAGCAATGGAAACAAGCTaGGAACCGAGGCCTCTGCTA | + |
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Preference number: 4 (lower is better) Translates to: EAMETSWEPRPLLHAKGAAMETS*EPRPLL Trigger: TAGCAGAGGCCTCGGTTCCCAGCTTGTTTCCATTGC...TGCCCCCTTTGCATGTAGCAGAGGCCTCGGTTCCCAGCTTGTTTCCATTGCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000543683.6 |
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| CDS-3UTR CCA 90 bp | GAAGCAATGGAAACAAGCTGGGAACCGAGGCCTCTGCTACATGCAAAGGGGGCACCCCAGGTCCTGATCTaGGGAAGCAATGGAAACAAG | + |
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Preference number: 4 (lower is better) Translates to: EAMETSWEPRPLLHAKGAPQVLI*GSNGNK Trigger: CTTGTTTCCATTGCTTCCCCAGATCAGGACCTGGGG...TGCCCCCTTTGCATGTAGCAGAGGCCTCGGTTCCCAGCTTGTTTCCATTGCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000543683.6 |
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| CDS-3UTR TCA 90 bp | GAAGCAATGGAAACAAGCTGGGAACCGAGGCCTCTGCTACATGCAAAGGGGGCACTTCATACATGCACATaGTGTCCTCCTCCTTGCACT | + |
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Preference number: 4 (lower is better) Translates to: EAMETSWEPRPLLHAKGALHTCT*CPPPCT Trigger: AGTGCAAGGAGGAGGACATCATGTGCATGTATGAAG...TGCCCCCTTTGCATGTAGCAGAGGCCTCGGTTCCCAGCTTGTTTCCATTGCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000543683.6 |
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| CDS-3UTR CCA 90 bp | AGCAATGGAAACAAGCTGGGAACCGAGGCCTCTGCTACATGCAAAGGGGGCAAAGATCTGGGGAAGCAATaGAAACAAGCTGGGAACCGA | + |
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Preference number: 4 (lower is better) Translates to: SNGNKLGTEASATCKGGKDLGKQ*KQAGNR Trigger: TCGGTTCCCAGCTTGTTTCCATTGCTTCCCCAGATC...TTTGCCCCCTTTGCATGTAGCAGAGGCCTCGGTTCCCAGCTTGTTTCCATTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000543683.6 |
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| CDS-3UTR GCA 90 bp | AGAACTGTAGGCCCCCAGGTCCTGATCTGGGGAAGCAATGGAAACAAGCTGGGAGCTTTGAGCCGATCCTaGATAATGTTGATAATTTCT | + |
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Preference number: 4 (lower is better) Translates to: RTVGPQVLIWGSNGNKLGALSRS*IMLIIS Trigger: AGAAATTATCAACATTATGCAGGATCGGCTCAAAGC...TCCCAGCTTGTTTCCATTGCTTCCCCAGATCAGGACCTGGGGGCCTACAGTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000543683.6 |
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| CDS TCA 90 bp | CTGGGAACCGAGGCCTCTGCTACATGCAAAGGGGGCAAAGTCAAGTaGGCACAAGGGAGGGGAGGGAAGATTTGCAATGGTTCTGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: LGTEASATCKGGKVK*AQGRGGKICNGSGP Trigger: GGGGCCAGAACCATTGCAAATCTTCCCTCCCCTCCCTTGTGCTCACTTGACTTTGCCCCCTTTGCATGTAGCAGAGGCCTCGGTTCCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000543683.6 ENST00000565031.1 |
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| CDS GCA 90 bp | CCTGATCTGGGGAAGCAATGGAAACAAGCTGGGAACCGAGGCCTCTaGTACATGCAAAGGGGGCAAAGTCAAGTGAGCACAAGGGAGGGG | + |
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Preference number: 5 (lower is better) Translates to: PDLGKQWKQAGNRGL*YMQRGQSQVSTREG Trigger: CCCCTCCCTTGTGCTCACTTGACTTTGCCCCCTTTGCATGTAGCAGAGGCCTCGGTTCCCAGCTTGTTTCCATTGCTTCCCCAGATCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000543683.6 ENST00000565031.1 |
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| CDS-3UTR CAA 90 bp | AGAACTGTAGGCCCCCAGGTCCTGATCTGGGGAAGCAATGGAAACAAGCTGGGAGAGGGGAGGGAAGATTaGCAATGGTTCTGGCCCCCA | + |
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Preference number: 5 (lower is better) Translates to: RTVGPQVLIWGSNGNKLGEGRED*QWFWPP Trigger: TGGGGGCCAGAACCATTGCAAATCTTCCCTCCCCTC...TCCCAGCTTGTTTCCATTGCTTCCCCAGATCAGGACCTGGGGGCCTACAGTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000543683.6 |
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| CDS TCA 90 bp | GGAGCAAGAGAGGCTAATCACAAGGAATCCTTTTCCTGTACCCTGTaGGAACAATTGAAAGCAAGAGCCCTGGGGTCTGGCTCCTCCCAT | + |
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Preference number: 5 (lower is better) Translates to: GAREANHKESFSCTL*EQLKARALGSGSSH Trigger: ATGGGAGGAGCCAGACCCCAGGGCTCTTGCTTTCAATTGTTCTCACAGGGTACAGGAAAAGGATTCCTTGTGATTAGCCTCTCTTGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565031.1 |
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| CDS-3UTR CAA 90 bp | AGAACTGTAGGCCCCCAGGTCCTGATCTGGGGAAGCAATGGAAACAAGCTGGGACGATCCTGCATAATGTaGATAATTTCTTGGTCGACT | + |
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Preference number: 5 (lower is better) Translates to: RTVGPQVLIWGSNGNKLGRSCIM*IISWST Trigger: AGTCGACCAAGAAATTATCAACATTATGCAGGATCG...TCCCAGCTTGTTTCCATTGCTTCCCCAGATCAGGACCTGGGGGCCTACAGTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000543683.6 |
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| CDS CCA 72 bp | GCTTTGAGCCGATCCTGCATAATGTTGATAATTTCTTaGTCGACTTTGCTGGTGGAGAAAAGGAGCAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: ALSRSCIMLIIS*STLLVEKRSKR Trigger: TCTCTTGCTCCTTTTCTCCACCAGCAAAGTCGACCAAGAAATTATCAACATTATGCAGGATCGGCTCAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565031.1 |
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| CDS CAA 72 bp | GGCTTTGAGCCGATCCTGCATAATGTTGATAATTTCTaGGTCGACTTTGATGCACATGATGTCCTCCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: GFEPILHNVDNF*VDFDAHDVLLL Trigger: AAGGAGGAGGACATCATGTGCATCAAAGTCGACCAAGAAATTATCAACATTATGCAGGATCGGCTCAAAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569148.1 |
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