Pregenerated sensors for NDUFB1 (Homo sapiens)
Ensembl gene IDs: ENSG00000183648Ensembl transcript IDs: ENST00000329559.8, ENST00000555441.5, ENST00000556555.1, ENST00000617122.1
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TTGGACGAATGTAAGCTGCTCGCGGAGGGGAGGCAGCGTCTTCCCTaGTTCAGGCCAGGCGTGGGATCCGGGCCGGTCTTCTCTCCAGTC | + |
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Preference number: 5 (lower is better) Translates to: LDECKLLAEGRQRLP*FRPGVGSGPVFSPV Trigger: GACTGGAGAGAAGACCGGCCCGGATCCCACGCCTGGCCTGAAGCAGGGAAGACGCTGCCTCCCCTCCGCGAGCAGCTTACATTCGTCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555441.5 ENST00000556555.1 |
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| CDS GCA 90 bp | AGGTTAGCGAGAAGACAGAAGGCTGGAACTTGGACGAATGTAAGCTaGTCGCGGAGGGGAGGCAGCGTCTTCCCTGCTTCAGGCCAGGCG | + |
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Preference number: 5 (lower is better) Translates to: RLARRQKAGTWTNVS*SRRGGSVFPASGQA Trigger: CGCCTGGCCTGAAGCAGGGAAGACGCTGCCTCCCCTCCGCGAGCAGCTTACATTCGTCCAAGTTCCAGCCTTCTGTCTTCTCGCTAACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555441.5 ENST00000556555.1 |
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| CDS CCA 90 bp | GGATCCGGGCCGGTCTTCTCTCCAGTCCGGTTAGCGGGCGGTCACTaGGTCACATCTCTACGGACGTTTTCCTGTTATGACAGCCTCAGA | + |
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Preference number: 5 (lower is better) Translates to: GSGPVFSPVRLAGGH*VTSLRTFSCYDSLR Trigger: TCTGAGGCTGTCATAACAGGAAAACGTCCGTAGAGATGTGACCCAGTGACCGCCCGCTAACCGGACTGGAGAGAAGACCGGCCCGGATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556555.1 |
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| CDS GCA 90 bp | CTAGGCCGGAGTGCAATGGCGCAATGGTGTCGGCTCAAGAGGATTTaGGATTTGGAAGAGAGCGAGGTTAGCGAGAAGACAGAAGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: LGRSAMAQWCRLKRI*DLEESEVSEKTEGW Trigger: CCAGCCTTCTGTCTTCTCGCTAACCTCGCTCTCTTCCAAATCGCAAATCCTCTTGAGCCGACACCATTGCGCCATTGCACTCCGGCCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556555.1 |
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| CDS CCA 90 bp | ATTTGGAAGAGAGCGAGGTTAGCGAGAAGACAGAAGGCTGGAACTTaGACGAATGTAAGCTGCTCGCGGAGGGGAGGCAGCGTCTTCCCT | + |
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Preference number: 5 (lower is better) Translates to: IWKRARLARRQKAGT*TNVSCSRRGGSVFP Trigger: AGGGAAGACGCTGCCTCCCCTCCGCGAGCAGCTTACATTCGTCCAAGTTCCAGCCTTCTGTCTTCTCGCTAACCTCGCTCTCTTCCAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555441.5 ENST00000556555.1 |
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| CDS CCA 90 bp | ATTTGCGATTTGGAAGAGAGCGAGGTTAGCGAGAAGACAGAAGGCTaGAACTTGGACGAATGTAAGCTGCTCGCGGAGGGGAGGCAGCGT | + |
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Preference number: 5 (lower is better) Translates to: ICDLEESEVSEKTEG*NLDECKLLAEGRQR Trigger: ACGCTGCCTCCCCTCCGCGAGCAGCTTACATTCGTCCAAGTTCCAGCCTTCTGTCTTCTCGCTAACCTCGCTCTCTTCCAAATCGCAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555441.5 ENST00000556555.1 |
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| CDS CCA 90 bp | GGAGTGCAATGGCGCAATGGTGTCGGCTCAAGAGGATTTGCGATTTaGAAGAGAGCGAGGTTAGCGAGAAGACAGAAGGCTGGAACTTGG | + |
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Preference number: 5 (lower is better) Translates to: GVQWRNGVGSRGFAI*KRARLARRQKAGTW Trigger: CCAAGTTCCAGCCTTCTGTCTTCTCGCTAACCTCGCTCTCTTCCAAATCGCAAATCCTCTTGAGCCGACACCATTGCGCCATTGCACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556555.1 |
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| CDS CCA 90 bp | AGATCATTTAGGCGCAACGGTGTCGGCTCAAGAGGATTTGCGATTTaGAAGAGAGCGAGGTTAGCGAGAAGACAGAAGGCTGGAACTTGG | + |
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Preference number: 5 (lower is better) Translates to: RSFRRNGVGSRGFAI*KRARLARRQKAGTW Trigger: CCAAGTTCCAGCCTTCTGTCTTCTCGCTAACCTCGCTCTCTTCCAAATCGCAAATCCTCTTGAGCCGACACCGTTGCGCCTAAATGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555441.5 |
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| CDS GCA 72 bp | TGTAAGCTGCTCGCGGAGGGGAGGCAGCGTCTTCCCTaGTTCAGGCCAGGCGTGGGATCCGGGCCGGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: CKLLAEGRQRLP*FRPGVGSGPVF Trigger: GAAGACCGGCCCGGATCCCACGCCTGGCCTGAAGCAGGGAAGACGCTGCCTCCCCTCCGCGAGCAGCTTACA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555441.5 ENST00000556555.1 |
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| CDS TCA 72 bp | ACCTGCCATTCGCCGCGCCCGCACGGAGCAGAGGGGTaGCGCCAGCAAATCATACTACTTTTTCCTCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: TCHSPRPHGAEG*RQQIILLFPPQ Trigger: CTGAGGAGGAAAAAGTAGTATGATTTGCTGGCGTCACCCCTCTGCTCCGTGCGGGCGCGGCGAATGGCAGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000329559.8 ENST00000617122.1 |
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| CDS CCA 72 bp | AGAGCGAGGTTAGCGAGAAGACAGAAGGCTGGAACTTaGACGAATGTAAGCTGCTCGCGGAGGGGAGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: RARLARRQKAGT*TNVSCSRRGGS Trigger: GCTGCCTCCCCTCCGCGAGCAGCTTACATTCGTCCAAGTTCCAGCCTTCTGTCTTCTCGCTAACCTCGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555441.5 ENST00000556555.1 |
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| CDS CAA 72 bp | GAGAGCGAGGTTAGCGAGAAGACAGAAGGCTGGAACTaGGACGAATGTAAGCTGCTCGCGGAGGGGAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: ESEVSEKTEGWN*DECKLLAEGRQ Trigger: CTGCCTCCCCTCCGCGAGCAGCTTACATTCGTCCAAGTTCCAGCCTTCTGTCTTCTCGCTAACCTCGCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555441.5 ENST00000556555.1 |
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| CDS CAA 90 bp | GATTTGGAAGAGAGCGAGGTTAGCGAGAAGACAGAAGGCTGGAACTaGGACGAATGTAAGCTGCTCGCGGAGGGGAGGCAGCGTCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: DLEESEVSEKTEGWN*DECKLLAEGRQRLP Trigger: GGGAAGACGCTGCCTCCCCTCCGCGAGCAGCTTACATTCGTCCAAGTTCCAGCCTTCTGTCTTCTCGCTAACCTCGCTCTCTTCCAAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555441.5 ENST00000556555.1 |
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| CDS GCA 72 bp | AGAAGACAGAAGGCTGGAACTTGGACGAATGTAAGCTaGTCGCGGAGGGGAGGCAGCGTCTTCCCTGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: RRQKAGTWTNVS*SRRGGSVFPAS Trigger: TGAAGCAGGGAAGACGCTGCCTCCCCTCCGCGAGCAGCTTACATTCGTCCAAGTTCCAGCCTTCTGTCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555441.5 ENST00000556555.1 |
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| CDS CCA 72 bp | CCGGTCTTCTCTCCAGTCCGGTTAGCGGGCGGTCACTaGGTCACATCTCTACGGACGTTTTCCTGTTATGAC | + |
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Preference number: 6 (lower is better) Translates to: PVFSPVRLAGGH*VTSLRTFSCYD Trigger: GTCATAACAGGAAAACGTCCGTAGAGATGTGACCCAGTGACCGCCCGCTAACCGGACTGGAGAGAAGACCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556555.1 |
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| CDS CCA 72 bp | TTGGAAGAGAGCGAGGTTAGCGAGAAGACAGAAGGCTaGAACTTGGACGAATGTAAGCTGCTCGCGGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: LEESEVSEKTEG*NLDECKLLAEG Trigger: CCCCTCCGCGAGCAGCTTACATTCGTCCAAGTTCCAGCCTTCTGTCTTCTCGCTAACCTCGCTCTCTTCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555441.5 ENST00000556555.1 |
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| CDS CCA 72 bp | AGGCGCAACGGTGTCGGCTCAAGAGGATTTGCGATTTaGAAGAGAGCGAGGTTAGCGAGAAGACAGAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: RRNGVGSRGFAI*KRARLARRQKA Trigger: AGCCTTCTGTCTTCTCGCTAACCTCGCTCTCTTCCAAATCGCAAATCCTCTTGAGCCGACACCGTTGCGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555441.5 |
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| CDS CAA 90 bp | CGGAGTGCAATGGCGCAATGGTGTCGGCTCAAGAGGATTTGCGATTaGGAAGAGAGCGAGGTTAGCGAGAAGACAGAAGGCTGGAACTTG | + |
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Preference number: 6 (lower is better) Translates to: RSAMAQWCRLKRICD*EESEVSEKTEGWNL Trigger: CAAGTTCCAGCCTTCTGTCTTCTCGCTAACCTCGCTCTCTTCCAAATCGCAAATCCTCTTGAGCCGACACCATTGCGCCATTGCACTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556555.1 |
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| CDS CCA 72 bp | TGGCGCAATGGTGTCGGCTCAAGAGGATTTGCGATTTaGAAGAGAGCGAGGTTAGCGAGAAGACAGAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: WRNGVGSRGFAI*KRARLARRQKA Trigger: AGCCTTCTGTCTTCTCGCTAACCTCGCTCTCTTCCAAATCGCAAATCCTCTTGAGCCGACACCATTGCGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556555.1 |
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| CDS CAA 72 bp | ATGGCGCAATGGTGTCGGCTCAAGAGGATTTGCGATTaGGAAGAGAGCGAGGTTAGCGAGAAGACAGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: MAQWCRLKRICD*EESEVSEKTEG Trigger: GCCTTCTGTCTTCTCGCTAACCTCGCTCTCTTCCAAATCGCAAATCCTCTTGAGCCGACACCATTGCGCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556555.1 |
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| CDS GCA 72 bp | AGTGCAATGGCGCAATGGTGTCGGCTCAAGAGGATTTaGGATTTGGAAGAGAGCGAGGTTAGCGAGAAGACA | + |
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Preference number: 6 (lower is better) Translates to: SAMAQWCRLKRI*DLEESEVSEKT Trigger: TGTCTTCTCGCTAACCTCGCTCTCTTCCAAATCGCAAATCCTCTTGAGCCGACACCATTGCGCCATTGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556555.1 |
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