Pregenerated sensors for NDUFAF7 (Homo sapiens)
Ensembl gene IDs: ENSG00000003509Ensembl transcript IDs: ENST00000002125.9, ENST00000336237.10, ENST00000416653.5, ENST00000431821.5, ENST00000432075.1, ENST00000439218.5, ENST00000441905.1, ENST00000455230.5, ENST00000469831.1, ENST00000474154.5, ENST00000474257.5, ENST00000483999.5
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTTTCGTCATGTTGTATGAAGGCTTCTGCTGGGGTGGCAGAAGGTaGCAAAACAAACCTCAGTTTATCAGAAACCTGTGGATCAATGTC | + |
|
Preference number: 1 (lower is better) Translates to: CFVMLYEGFCWGGRR*QNKPQFIRNLWINV Trigger: GACATTGATCCACAGGTTTCTGATAAACTGAGGTTTGTTTTGGCACCTTCTGCCACCCCAGCAGAAGCCTTCATACAACATGACGAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455230.5 |
||
| 3UTR-3UTR TCA 90 bp | CAAAACAAACCTCAGTTTATCAGAAACCTGTGGATCAATGTCAACAAATACTTCCCCTGTGGTGTTTTCTaGAATTTATGCACAGGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: QNKPQFIRNLWINVNKYFPCGVF*NLCTGR Trigger: TCTTCCTGTGCATAAATTTCAGAAAACACCACAGGG...GAAGTATTTGTTGACATTGATCCACAGGTTTCTGATAAACTGAGGTTTGTTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000455230.5 |
||
| 3UTR CAA 90 bp | TTCATCATTACAATTTCATTTTCTCCTAGGACTATCAGACTTGGCTaGACCTTAGAGAATTTGAAACTCGCATTGGAGAACGTTACATTA | + |
|
Preference number: 2 (lower is better) Translates to: FIITISFSPRTIRLG*TLENLKLALENVTL Trigger: TAATGTAACGTTCTCCAATGCGAGTTTCAAATTCTCTAAGGTCAAGCCAAGTCTGATAGTCCTAGGAGAAAATGAAATTGTAATGATGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441905.1 |
||
| 3UTR GCA 72 bp | ATGATCCCTTGTTTCGTCATGTTGTATGAAGGCTTCTaGTGGGGTGGCAGAAGGTGCCAAAACAAACCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: MIPCFVMLYEGF*WGGRRCQNKPQ Trigger: CTGAGGTTTGTTTTGGCACCTTCTGCCACCCCAGCAGAAGCCTTCATACAACATGACGAAACAAGGGATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455230.5 |
||
| 3UTR GCA 72 bp | ATGTTGTATGAAGGCTTCTGCTGGGGTGGCAGAAGGTaGCAAAACAAACCTCAGTTTATCAGAAACCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: MLYEGFCWGGRR*QNKPQFIRNLW Trigger: CCACAGGTTTCTGATAAACTGAGGTTTGTTTTGGCACCTTCTGCCACCCCAGCAGAAGCCTTCATACAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455230.5 |
||
| 3UTR-3UTR CAA 90 bp | GACCTTAGAGAATTTGAAACTCGCATTGGAGAACGTTACATTACACATGAAAGTCTTGTTCTTTGTAGATaGTCATCTGCAGTGCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: DLREFETRIGERYITHESLVLCR*SSAVLQ Trigger: CTGCAGCACTGCAGATGACAATCTACAAAGAACAAG...ACTTTCATGTGTAATGTAACGTTCTCCAATGCGAGTTTCAAATTCTCTAAGGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441905.1 |
||
| 3UTR TCA 72 bp | TTAAAGGAAACTCAGTTTCACAATAACTTATTAGCTTaGGCACACATTTGCACCAAAGCCAGTCACAACCCT | + |
|
Preference number: 3 (lower is better) Translates to: LKETQFHNNLLA*AHICTKASHNP Trigger: AGGGTTGTGACTGGCTTTGGTGCAAATGTGTGCTCAAGCTAATAAGTTATTGTGAAACTGAGTTTCCTTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000002125.9 ENST00000336237.10 |
||
| CDS-3UTR CCA 90 bp | CTGGGGTGGCAGAAGGTGCCAAAACAAACCTCAGTTTATCAGAAACCTGTGGATCGCTCCGCCAGGAGCTaGGGCTTAGACCATTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LGWQKVPKQTSVYQKPVDRSARS*GLDHFR Trigger: CCGGAAATGGTCTAAGCCCCAGCTCCTGGCGGAGCG...ATCCACAGGTTTCTGATAAACTGAGGTTTGTTTTGGCACCTTCTGCCACCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455230.5 |
||
| CDS-3UTR TCA 90 bp | CTGGGGTGGCAGAAGGTGCCAAAACAAACCTCAGTTTATCAGAAACCTGTGGATAGCACAGATCCAAGTTaGGTGAACACCTGGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LGWQKVPKQTSVYQKPVDSTDPS*VNTWAQ Trigger: CTGGGCCCAGGTGTTCACTCAACTTGGATCTGTGCT...ATCCACAGGTTTCTGATAAACTGAGGTTTGTTTTGGCACCTTCTGCCACCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455230.5 |
||
| CDS-3UTR GCA 90 bp | CTGGGGTGGCAGAAGGTGCCAAAACAAACCTCAGTTTATCAGAAACCTGTGGATCCAGCTGGAAAGCTGTaGTTTTTCCAGTGGCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LGWQKVPKQTSVYQKPVDPAGKL*FFQWPS Trigger: GGATGGCCACTGGAAAAAGCACAGCTTTCCAGCTGG...ATCCACAGGTTTCTGATAAACTGAGGTTTGTTTTGGCACCTTCTGCCACCCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000455230.5 |
||
| CDS-3UTR TCA 90 bp | CTGGGGTGGCAGAAGGTGCCAAAACAAACCTCAGTTTATCAGAAACCTGTGGATTTTCGTCATGTTGTATaGAGGCTTCTGCTGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGWQKVPKQTSVYQKPVDFRHVV*RLLLGW Trigger: CCACCCCAGCAGAAGCCTTCATACAACATGACGAAA...ATCCACAGGTTTCTGATAAACTGAGGTTTGTTTTGGCACCTTCTGCCACCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000455230.5 |
||
| CDS-3UTR GCA 90 bp | GTTTATCAGAAACCTGTGGATCAATGTCAACAAATACTTCTCGCCATCCCTGTGTTGTATGAAGGCTTCTaGTGGGGTGGCAGAAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VYQKPVDQCQQILLAIPVLYEGF*WGGRRC Trigger: GCACCTTCTGCCACCCCAGCAGAAGCCTTCATACAA...CACAGGGATGGCGAGAAGTATTTGTTGACATTGATCCACAGGTTTCTGATAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455230.5 |
||
| CDS-3UTR GCA 90 bp | GAAACCTGTGGATCAATGTCAACAAATACTTCTCGCCATCCCTGTGGTGTTTTCATTTTGTACATAAGATaGCGCAGCATCGGCGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: ETCGSMSTNTSRHPCGVFILYIR*RSIGVT Trigger: GGTGACGCCGATGCTGCGGCATCTTATGTACAAAAT...GAAAACACCACAGGGATGGCGAGAAGTATTTGTTGACATTGATCCACAGGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455230.5 |
||
| CDS-3UTR TCA 90 bp | AACAAACCTCAGTTTATCAGAAACCTGTGGATCAATGTCAACAAATACTTCTCGCAACGGCCCCAAACCTaGCCTCAGCAGTACACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NKPQFIRNLWINVNKYFSQRPQT*PQQYTH Trigger: ATGAGTGTACTGCTGAGGTCAGGTTTGGGGCCGTTG...CGAGAAGTATTTGTTGACATTGATCCACAGGTTTCTGATAAACTGAGGTTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455230.5 |
||
| CDS-3UTR TCA 90 bp | TCAGTTTATCAGAAACCTGTGGATCAATGTCAACAAATACTTCTCGCCATCCCTGCTCATTCCCGGAGCTaGAGTATTTCCCTCTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SVYQKPVDQCQQILLAIPAHSRS*SISLSK Trigger: TTTGGAGAGGGAAATACTTCAGCTCCGGGAATGAGC...AGGGATGGCGAGAAGTATTTGTTGACATTGATCCACAGGTTTCTGATAAACTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455230.5 |
||
| CDS-3UTR TCA 90 bp | GTGCCAAAACAAACCTCAGTTTATCAGAAACCTGTGGATCAATGTCAACAAATACAGATCCAAGTTGAGTaGACACCTGGGCCCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VPKQTSVYQKPVDQCQQIQIQVE*TPGPSS Trigger: GGAACTGGGCCCAGGTGTTCACTCAACTTGGATCTG...TATTTGTTGACATTGATCCACAGGTTTCTGATAAACTGAGGTTTGTTTTGGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455230.5 |
||
| CDS-3UTR GCA 90 bp | CAAAACAAACCTCAGTTTATCAGAAACCTGTGGATCAATGTCAACAAATACTTCCGTCACCGGGTTTTCTaGAGGCTCATTCCCGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QNKPQFIRNLWINVNKYFRHRVF*RLIPGA Trigger: AGCTCCGGGAATGAGCCTGCAGAAAACCCGGTGACG...GAAGTATTTGTTGACATTGATCCACAGGTTTCTGATAAACTGAGGTTTGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455230.5 |
||
| CDS-3UTR TCA 90 bp | AACAAACCTCAGTTTATCAGAAACCTGTGGATCAATGTCAACAAATACTTCTCGGCAGTACACTCATGCTaGAATTCGCAGGCTAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: NKPQFIRNLWINVNKYFSAVHSC*NSQASS Trigger: CGAGCTAGCCTGCGAATTTCAGCATGAGTGTACTGC...CGAGAAGTATTTGTTGACATTGATCCACAGGTTTCTGATAAACTGAGGTTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455230.5 |
||
| CDS-3UTR TCA 90 bp | GAAACCTGTGGATCAATGTCAACAAATACTTCTCGCCATCCCTGTGGTGTTTTCCCCTGTGGTGTTTTCTaGAATTTATGCACAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ETCGSMSTNTSRHPCGVFPCGVF*NLCTGR Trigger: TCTTCCTGTGCATAAATTTCAGAAAACACCACAGGG...GAAAACACCACAGGGATGGCGAGAAGTATTTGTTGACATTGATCCACAGGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000455230.5 |
||
| CDS-3UTR TCA 90 bp | GTTTATCAGAAACCTGTGGATCAATGTCAACAAATACTTCTCGCCATCCCTGTGGGACACACTTCAACATaGTCCCTTGTTTCGTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: VYQKPVDQCQQILLAIPVGHTST*SLVSSC Trigger: ACATGACGAAACAAGGGATCATGTTGAAGTGTGTCC...CACAGGGATGGCGAGAAGTATTTGTTGACATTGATCCACAGGTTTCTGATAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455230.5 |
||
| CDS-3UTR TCA 90 bp | TACACACATAACCTTGTATACCCAAAGCACTTCATTATGGCTCCTAATCCAGATGGATGCAAAGGGTTTTaGCTGACGTGCATTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YTHNLVYPKHFIMAPNPDGCKGF*LTCIPL Trigger: CAGAGGAATGCACGTCAGTCAAAACCCTTTGCATCC...ATCTGGATTAGGAGCCATAATGAAGTGCTTTGGGTATACAAGGTTATGTGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441905.1 |
||
| CDS-3UTR CCA 90 bp | GAAACCTGTGGATCAATGTCAACAAATACTTCTCGCCATCCCTGTGGTGTTTTCATAATAACCCTTGGCTaGATTAGTCAACACCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ETCGSMSTNTSRHPCGVFIITLG*ISQHLL Trigger: AAGGAGGTGTTGACTAATCCAGCCAAGGGTTATTAT...GAAAACACCACAGGGATGGCGAGAAGTATTTGTTGACATTGATCCACAGGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455230.5 |
||
| CDS-3UTR CCA 90 bp | GTGCCAAAACAAACCTCAGTTTATCAGAAACCTGTGGATCAATGTCAACAAATACCCAGTTCCACCAGCTaGAAAGCTGTGCTTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VPKQTSVYQKPVDQCQQIPSSTS*KAVLFP Trigger: TGGAAAAAGCACAGCTTTCCAGCTGGTGGAACTGGG...TATTTGTTGACATTGATCCACAGGTTTCTGATAAACTGAGGTTTGTTTTGGCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000455230.5 |
||
| 3UTR CAA 72 bp | CCTAGGACTATCAGACTTGGCTTGACCTTAGAGAATTaGAAACTCGCATTGGAGAACGTTACATTACACATG | + |
|
Preference number: 4 (lower is better) Translates to: PRTIRLGLTLEN*KLALENVTLHM Trigger: CATGTGTAATGTAACGTTCTCCAATGCGAGTTTCAAATTCTCTAAGGTCAAGCCAAGTCTGATAGTCCTAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441905.1 |
||
| CDS-3UTR TCA 90 bp | TTTATCAGAAACCTGTGGATCAATGTCAACAAATACTTCTCGCCATCCCTGTGGAGCTCCCCAAAGATTTaGCTTATTTCAGGTGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FIRNLWINVNKYFSPSLWSSPKI*LISGEV Trigger: TACTTCACCTGAAATAAGTCAAATCTTTGGGGAGCT...CCACAGGGATGGCGAGAAGTATTTGTTGACATTGATCCACAGGTTTCTGATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455230.5 |
||
| CDS-3UTR GCA 90 bp | AACAAACCTCAGTTTATCAGAAACCTGTGGATCAATGTCAACAAATACTTCTCGTGGGGTGGCAGAAGGTaGCAAAACAAACCTCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: NKPQFIRNLWINVNKYFSWGGRR*QNKPQF Trigger: AAACTGAGGTTTGTTTTGGCACCTTCTGCCACCCCA...CGAGAAGTATTTGTTGACATTGATCCACAGGTTTCTGATAAACTGAGGTTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455230.5 |
||
| CDS-3UTR CCA 90 bp | CTTGTTCTTTGTAGATTGTCATCTGCAGTGCTGCAGTATATGAAATGTGTTTCCAGTGATGATGCTCGCTaGGAAATACATGCATACACA | + |
|
Preference number: 4 (lower is better) Translates to: LVLCRLSSAVLQYMKCVSSDDAR*EIHAYT Trigger: TGTGTATGCATGTATTTCCCAGCGAGCATCATCACT...GGAAACACATTTCATATACTGCAGCACTGCAGATGACAATCTACAAAGAACAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441905.1 |
||
| CDS-3UTR GCA 90 bp | ACACACATAACCTTGTATACCCAAAGCACTTCATTATGGCTCCTAATCCAGATGAAGCTGAAATATCACTaGCAAGCAAGTTCACTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: THITLYTQSTSLWLLIQMKLKYH*QASSLN Trigger: GTTTAGTGAACTTGCTTGGCAGTGATATTTCAGCTT...CATCTGGATTAGGAGCCATAATGAAGTGCTTTGGGTATACAAGGTTATGTGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441905.1 |
||
| CDS-3UTR CCA 90 bp | GCATACACACATAACCTTGTATACCCAAAGCACTTCATTATGGCTCCTAATCCACAAAGCACTTCATTATaGCTCCTAATCCAGATGATA | + |
|
Preference number: 4 (lower is better) Translates to: AYTHNLVYPKHFIMAPNPQSTSL*LLIQMI Trigger: TATCATCTGGATTAGGAGCCATAATGAAGTGCTTTG...TGGATTAGGAGCCATAATGAAGTGCTTTGGGTATACAAGGTTATGTGTGTATGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441905.1 |
||
| 3UTR CAA 72 bp | ACAATTTCATTTTCTCCTAGGACTATCAGACTTGGCTaGACCTTAGAGAATTTGAAACTCGCATTGGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TISFSPRTIRLG*TLENLKLALEN Trigger: GTTCTCCAATGCGAGTTTCAAATTCTCTAAGGTCAAGCCAAGTCTGATAGTCCTAGGAGAAAATGAAATTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441905.1 |
||
| CDS-3UTR TCA 90 bp | ATCATTACAATTTCATTTTCTCCTAGGACTATCAGACTTGGCTTGACCTTAGAGGTAAAATGTCCAAGCTaGAATATCACTGCCAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: IITISFSPRTIRLGLTLEVKCPS*NITAKQ Trigger: TTGCTTGGCAGTGATATTTCAGCTTGGACATTTTAC...CTCTAAGGTCAAGCCAAGTCTGATAGTCCTAGGAGAAAATGAAATTGTAATGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441905.1 |
||
| CDS-3UTR TCA 90 bp | TGCCAAAACAAACCTCAGTTTATCAGAAACCTGTGGATCAATGTCAACAAATACCTCTACCAGATGTACTaGAATGTCACAATTTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CQNKPQFIRNLWINVNKYLYQMY*NVTIFQ Trigger: CTGAAAAATTGTGACATTTCAGTACATCTGGTAGAG...GTATTTGTTGACATTGATCCACAGGTTTCTGATAAACTGAGGTTTGTTTTGGCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000455230.5 |
||
| CDS GCA 90 bp | GGGCGCAGAGACAGCACCCACTTGCCCACGACTACGCAGCCCTATTaGGTTTGTACCGGACCCGTTTCCAGCCCAGGGTACCTTCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GRRDSTHLPTTTQPY*VCTGPVSSPGYLQG Trigger: ACCTTGAAGGTACCCTGGGCTGGAAACGGGTCCGGTACAAACGCAATAGGGCTGCGTAGTCGTGGGCAAGTGGGTGCTGTCTCTGCGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432075.1 |
||
| CDS GCA 90 bp | CTACTGTGCTTAGCACGCCCACGGGGCGCAGAGACAGCACCCACTTaGCCACGACTACGCAGCCCTATTGCGTTTGTACCGGACCCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LLCLARPRGAETAPT*PRLRSPIAFVPDPF Trigger: AAACGGGTCCGGTACAAACGCAATAGGGCTGCGTAGTCGTGGGCAAGTGGGTGCTGTCTCTGCGCCCCGTGGGCGTGCTAAGCACAGTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432075.1 |
||
| CDS TCA 90 bp | CGGCACACAACGGCCCCAAACCTGACCTCAGCAGTACACTCATGCTaGAATTCGCAGGCTAGCTCGCTCCGCCAGGAGCTGGGGCTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: RHTTAPNLTSAVHSC*NSQASSLRQELGLR Trigger: TCTAAGCCCCAGCTCCTGGCGGAGCGAGCTAGCCTGCGAATTTCAGCATGAGTGTACTGCTGAGGTCAGGTTTGGGGCCGTTGTGTGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000002125.9 ENST00000455230.5 |
||
| CDS GCA 90 bp | TCGGCCACAGTGATGGGACCAGTAGACTTTATTTTGTACATAAGATaGCGCAGCATCGGCGTCACCGGGTTTTCTGCAGGCTCATTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: SATVMGPVDFILYIR*RSIGVTGFSAGSFP Trigger: CGGGAATGAGCCTGCAGAAAACCCGGTGACGCCGATGCTGCGGCATCTTATGTACAAAATAAAGTCTACTGGTCCCATCACTGTGGCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000002125.9 ENST00000336237.10 ENST00000416653.5 ENST00000432075.1 ENST00000439218.5 ENST00000455230.5 ENST00000469831.1 ENST00000474154.5 |
||
| CDS CCA 90 bp | ATATCTCCCACGAGGGTTCCCCTACCTGGGCCCAGTTCCACCAGCTaGAAAGCTGTGCTTTTTCCAGTGGCCATCCATTCACTAATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ISPTRVPLPGPSSTS*KAVLFPVAIHSLMN Trigger: GTTCATTAGTGAATGGATGGCCACTGGAAAAAGCACAGCTTTCCAGCTGGTGGAACTGGGCCCAGGTAGGGGAACCCTCGTGGGAGATAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000002125.9 ENST00000336237.10 ENST00000416653.5 ENST00000431821.5 ENST00000432075.1 ENST00000439218.5 ENST00000469831.1 ENST00000474154.5 |
||
| CDS GCA 90 bp | ACCCACCTACTAACACTGCTTCCATCAGCCCCAGCTGCCTTGGGCTaGTCCGTCATCGGTACAACCCTAGCTATAGGGAAATACTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: THLLTLLPSAPAALG*SVIGTTLAIGKYSK Trigger: TTTTGAGTATTTCCCTATAGCTAGGGTTGTACCGATGACGGAGCAGCCCAAGGCAGCTGGGGCTGATGGAAGCAGTGTTAGTAGGTGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000474154.5 ENST00000474257.5 |
||
| CDS CCA 90 bp | TTTCATAAAATCGGGCTTCTCAGCCTGAGAAGGCTGAGGCAGGAATaGCTTGAGATCCCTTACCCAAGATCGTACCCCCACTTTGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: FHKIGLLSLRRLRQE*LEIPYPRSYPHFGF Trigger: AAAGCCAAAGTGGGGGTACGATCTTGGGTAAGGGATCTCAAGCCATTCCTGCCTCAGCCTTCTCAGGCTGAGAAGCCCGATTTTATGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000474154.5 ENST00000474257.5 |
||
| CDS GCA 90 bp | TATTTTGTACATAAGATGCCGCAGCATCGGCGTCACCGGGTTTTCTaGAGGCTCATTCCCGGAGCTGAAGTATTTCCCTCTCCAAATAAA | + |
|
Preference number: 5 (lower is better) Translates to: YFVHKMPQHRRHRVF*RLIPGAEVFPSPNK Trigger: TTTATTTGGAGAGGGAAATACTTCAGCTCCGGGAATGAGCCTGCAGAAAACCCGGTGACGCCGATGCTGCGGCATCTTATGTACAAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000002125.9 ENST00000336237.10 ENST00000416653.5 ENST00000432075.1 ENST00000439218.5 ENST00000455230.5 ENST00000469831.1 ENST00000474154.5 |
||
| CDS CCA 90 bp | GCTGTACCCTTTTGGAACATCGTGCAGATCTCGGTACCAGGAAATTaGAATCCCAGACTTAGTGACACCTTTCATATACACTGGGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: AVPFWNIVQISVPGN*NPRLSDTFHIHWGS Trigger: GGATCCCCAGTGTATATGAAAGGTGTCACTAAGTCTGGGATTCCAATTTCCTGGTACCGAGATCTGCACGATGTTCCAAAAGGGTACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000002125.9 ENST00000431821.5 ENST00000439218.5 ENST00000483999.5 |
||
| CDS-3UTR CAA 90 bp | GTTTATCAGAAACCTGTGGATCAATGTCAACAAATACTTCTCGCCATCCCTGTGCAGCACAGATCCAAGTaGAGTGAACACCTGGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: VYQKPVDQCQQILLAIPVQHRSK*SEHLGP Trigger: TGGGCCCAGGTGTTCACTCAACTTGGATCTGTGCTG...CACAGGGATGGCGAGAAGTATTTGTTGACATTGATCCACAGGTTTCTGATAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455230.5 |
||
| CDS TCA 90 bp | GGCTTTGAGTCAAGACTCAAACTAGTCAATACTAGTCAGTATTCCTaGCTAGTACAGGGATTTTCCCCCACACCTTGCTTGTCTTTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GFESRLKLVNTSQYS*LVQGFSPTPCLSLG Trigger: GCCTAAAGACAAGCAAGGTGTGGGGGAAAATCCCTGTACTAGTCAGGAATACTGACTAGTATTGACTAGTTTGAGTCTTGACTCAAAGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000474154.5 ENST00000474257.5 |
||
| CDS CCA 90 bp | GTAATTACCTTTTGGAACATCGTGCAGATCTCGGTACCAGGAAATTaGAATCCCAGACTTAGTGACACCTTTCATATACACTGGGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: VITFWNIVQISVPGN*NPRLSDTFHIHWGS Trigger: GGATCCCCAGTGTATATGAAAGGTGTCACTAAGTCTGGGATTCCAATTTCCTGGTACCGAGATCTGCACGATGTTCCAAAAGGTAATTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000469831.1 ENST00000474154.5 |
||
| CDS-3UTR CAA 90 bp | TTTATCAGAAACCTGTGGATCAATGTCAACAAATACTTCTCGCCATCCCTGTGGCCTTGTTTCGTCATGTaGTATGAAGGCTTCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FIRNLWINVNKYFSPSLWPCFVM*YEGFCW Trigger: CCAGCAGAAGCCTTCATACAACATGACGAAACAAGG...CCACAGGGATGGCGAGAAGTATTTGTTGACATTGATCCACAGGTTTCTGATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455230.5 |
||
| CDS GCA 90 bp | TGTTTCGTCATGTTGTATGAAGGCTTCTGCTGGGGTGGCAGAAGGTaGCAAAACAAACCTCAGTTTATCAGAAACCTGAAATTTATGCAC | + |
|
Preference number: 5 (lower is better) Translates to: CFVMLYEGFCWGGRR*QNKPQFIRNLKFMH Trigger: GTGCATAAATTTCAGGTTTCTGATAAACTGAGGTTTGTTTTGGCACCTTCTGCCACCCCAGCAGAAGCCTTCATACAACATGACGAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000474154.5 |
||
| CDS-3UTR CAA 90 bp | ATCATTACAATTTCATTTTCTCCTAGGACTATCAGACTTGGCTTGACCTTAGAGCGGATGCAAAGGGTTTaGACTGACGTGCATTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: IITISFSPRTIRLGLTLERMQRV*TDVHSS Trigger: AGAGGAATGCACGTCAGTCAAAACCCTTTGCATCCG...CTCTAAGGTCAAGCCAAGTCTGATAGTCCTAGGAGAAAATGAAATTGTAATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441905.1 |
||
| CDS-3UTR CAA 90 bp | ATCATTACAATTTCATTTTCTCCTAGGACTATCAGACTTGGCTTGACCTTAGAGCTGATATCTTCCACCTaGAAGTCTCTTCAGCCGGAC | + |
|
Preference number: 5 (lower is better) Translates to: IITISFSPRTIRLGLTLELISST*KSLQPD Trigger: GTCCGGCTGAAGAGACTTCAAGGTGGAAGATATCAG...CTCTAAGGTCAAGCCAAGTCTGATAGTCCTAGGAGAAAATGAAATTGTAATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441905.1 |
||
| CDS-3UTR CAA 90 bp | GCATACACACATAACCTTGTATACCCAAAGCACTTCATTATGGCTCCTAATCCACTTGTTCTTTGTAGATaGTCATCTGCAGTGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: AYTHNLVYPKHFIMAPNPLVLCR*SSAVLQ Trigger: CTGCAGCACTGCAGATGACAATCTACAAAGAACAAG...TGGATTAGGAGCCATAATGAAGTGCTTTGGGTATACAAGGTTATGTGTGTATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441905.1 |
||
| CDS TCA 90 bp | GCATTTCGCTCTAACGGGACCTTCTCTTTAGTCAGTGTCAATGCTTaGATCTCACTTAATTTTTGGCTTACCTCTACCAGATGTACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: AFRSNGTFSLVSVNA*ISLNFWLTSTRCTE Trigger: TTCAGTACATCTGGTAGAGGTAAGCCAAAAATTAAGTGAGATTCAAGCATTGACACTGACTAAAGAGAAGGTCCCGTTAGAGCGAAATGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000002125.9 ENST00000431821.5 ENST00000432075.1 ENST00000439218.5 ENST00000469831.1 ENST00000474154.5 ENST00000483999.5 |
||
| CDS-3UTR CAA 90 bp | TCTCCTAGGACTATCAGACTTGGCTTGACCTTAGAGAATTTGAAACTCGCATTGTTGACCTTAGAGAATTaGAAACTCGCATTGGAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SPRTIRLGLTLENLKLALLTLEN*KLALEN Trigger: GTTCTCCAATGCGAGTTTCAAATTCTCTAAGGTCAA...CAATGCGAGTTTCAAATTCTCTAAGGTCAAGCCAAGTCTGATAGTCCTAGGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441905.1 |
||
| CDS-3UTR CAA 90 bp | CATACACACATAACCTTGTATACCCAAAGCACTTCATTATGGCTCCTAATCCAGCATACACACATAACCTaGTATACCCAAAGCACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: HTHITLYTQSTSLWLLIQHTHIT*YTQSTS Trigger: TGAAGTGCTTTGGGTATACAAGGTTATGTGTGTATG...CTGGATTAGGAGCCATAATGAAGTGCTTTGGGTATACAAGGTTATGTGTGTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441905.1 |
||
| CDS-3UTR CAA 90 bp | TCTCCTAGGACTATCAGACTTGGCTTGACCTTAGAGAATTTGAAACTCGCATTGAATTTGAAACTCGCATaGGAGAACGTTACATTACAC | + |
|
Preference number: 5 (lower is better) Translates to: SPRTIRLGLTLENLKLALNLKLA*ENVTLH Trigger: GTGTAATGTAACGTTCTCCAATGCGAGTTTCAAATT...CAATGCGAGTTTCAAATTCTCTAAGGTCAAGCCAAGTCTGATAGTCCTAGGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441905.1 |
||
| CDS-3UTR CAA 90 bp | GTGCCAAAACAAACCTCAGTTTATCAGAAACCTGTGGATCAATGTCAACAAATACCAGTAGACTTTATTTaGTACATAAGATGCCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VPKQTSVYQKPVDQCQQIPVDFI*YIRCRS Trigger: GCTGCGGCATCTTATGTACAAAATAAAGTCTACTGG...TATTTGTTGACATTGATCCACAGGTTTCTGATAAACTGAGGTTTGTTTTGGCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455230.5 |
||
| CDS CCA 90 bp | GTGATCAAAATTCTTTCATTAATCCACATAAAGGTAATTACCTTTTaGAACATCGTGCAGATCTCGGTACCAGGAAATTGGAATCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VIKILSLIHIKVITF*NIVQISVPGNWNPR Trigger: TCTGGGATTCCAATTTCCTGGTACCGAGATCTGCACGATGTTCCAAAAGGTAATTACCTTTATGTGGATTAATGAAAGAATTTTGATCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000469831.1 ENST00000474154.5 |
||
| CDS-3UTR CAA 90 bp | GACCTTAGAGAATTTGAAACTCGCATTGGAGAACGTTACATTACACATGAAAGTACTATCAGACTTGGCTaGACCTTAGAGAATTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: DLREFETRIGERYITHESTIRLG*TLENLK Trigger: TTTCAAATTCTCTAAGGTCAAGCCAAGTCTGATAGT...ACTTTCATGTGTAATGTAACGTTCTCCAATGCGAGTTTCAAATTCTCTAAGGTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441905.1 |
||
| CDS TCA 72 bp | GAGCCCTTGATCCCCCGGTACCCTCAACTGAAGAGCTaGGGAAGGCGCCCCACGCGGCTTCCACGGCAACCG | + |
|
Preference number: 6 (lower is better) Translates to: EPLIPRYPQLKS*GRRPTRLPRQP Trigger: CGGTTGCCGTGGAAGCCGCGTGGGGCGCCTTCCTCAGCTCTTCAGTTGAGGGTACCGGGGGATCAAGGGCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000469831.1 ENST00000483999.5 |
||
| CDS CAA 90 bp | GGGGCGCAGAGACAGCACCCACTTGCCCACGACTACGCAGCCCTATaGCGTTTGTACCGGACCCGTTTCCAGCCCAGGGTACCTTCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GAQRQHPLAHDYAAL*RLYRTRFQPRVPSR Trigger: CCTTGAAGGTACCCTGGGCTGGAAACGGGTCCGGTACAAACGCAATAGGGCTGCGTAGTCGTGGGCAAGTGGGTGCTGTCTCTGCGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432075.1 |
||
| CDS CAA 90 bp | GCTACTGTGCTTAGCACGCCCACGGGGCGCAGAGACAGCACCCACTaGCCCACGACTACGCAGCCCTATTGCGTTTGTACCGGACCCGTT | + |
|
Preference number: 6 (lower is better) Translates to: ATVLSTPTGRRDSTH*PTTTQPYCVCTGPV Trigger: AACGGGTCCGGTACAAACGCAATAGGGCTGCGTAGTCGTGGGCAAGTGGGTGCTGTCTCTGCGCCCCGTGGGCGTGCTAAGCACAGTAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432075.1 |
||
| CDS GCA 72 bp | TTAGCACGCCCACGGGGCGCAGAGACAGCACCCACTTaGCCACGACTACGCAGCCCTATTGCGTTTGTACCG | + |
|
Preference number: 6 (lower is better) Translates to: LARPRGAETAPT*PRLRSPIAFVP Trigger: CGGTACAAACGCAATAGGGCTGCGTAGTCGTGGGCAAGTGGGTGCTGTCTCTGCGCCCCGTGGGCGTGCTAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432075.1 |
||
| CDS CCA 72 bp | GCTGAAATTCGCAGGCTAGCTCGCTCCGCCAGGAGCTaGGGCTTAGACCATTTCCGGGAGAAGACACGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: AEIRRLARSARS*GLDHFREKTRP Trigger: GGGGCGTGTCTTCTCCCGGAAATGGTCTAAGCCCCAGCTCCTGGCGGAGCGAGCTAGCCTGCGAATTTCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455230.5 |
||
| CDS CAA 72 bp | CTTAGCACGCCCACGGGGCGCAGAGACAGCACCCACTaGCCCACGACTACGCAGCCCTATTGCGTTTGTACC | + |
|
Preference number: 6 (lower is better) Translates to: LSTPTGRRDSTH*PTTTQPYCVCT Trigger: GGTACAAACGCAATAGGGCTGCGTAGTCGTGGGCAAGTGGGTGCTGTCTCTGCGCCCCGTGGGCGTGCTAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432075.1 |
||
| CDS GCA 72 bp | GACAGCACCCACTTGCCCACGACTACGCAGCCCTATTaGGTTTGTACCGGACCCGTTTCCAGCCCAGGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: DSTHLPTTTQPY*VCTGPVSSPGY Trigger: GTACCCTGGGCTGGAAACGGGTCCGGTACAAACGCAATAGGGCTGCGTAGTCGTGGGCAAGTGGGTGCTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432075.1 |
||
| CDS TCA 72 bp | ACGGCCCCAAACCTGACCTCAGCAGTACACTCATGCTaGAATTCGCAGGCTAGCTCGCTCCGCCAGGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TAPNLTSAVHSC*NSQASSLRQEL Trigger: CAGCTCCTGGCGGAGCGAGCTAGCCTGCGAATTTCAGCATGAGTGTACTGCTGAGGTCAGGTTTGGGGCCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000002125.9 ENST00000455230.5 ENST00000474154.5 |
||
| CDS CAA 72 bp | CACCCACTTGCCCACGACTACGCAGCCCTATTGCGTTaGTACCGGACCCGTTTCCAGCCCAGGGTACCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: HPLAHDYAALLR*YRTRFQPRVPS Trigger: TGAAGGTACCCTGGGCTGGAAACGGGTCCGGTACAAACGCAATAGGGCTGCGTAGTCGTGGGCAAGTGGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432075.1 |
||
| CDS CAA 72 bp | AGACAGCACCCACTTGCCCACGACTACGCAGCCCTATaGCGTTTGTACCGGACCCGTTTCCAGCCCAGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: RQHPLAHDYAAL*RLYRTRFQPRV Trigger: TACCCTGGGCTGGAAACGGGTCCGGTACAAACGCAATAGGGCTGCGTAGTCGTGGGCAAGTGGGTGCTGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432075.1 |
||
| CDS CAA 90 bp | CAGAGACAGCACCCACTTGCCCACGACTACGCAGCCCTATTGCGTTaGTACCGGACCCGTTTCCAGCCCAGGGTACCTTCAAGGTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: QRQHPLAHDYAALLR*YRTRFQPRVPSRWK Trigger: CTTCCACCTTGAAGGTACCCTGGGCTGGAAACGGGTCCGGTACAAACGCAATAGGGCTGCGTAGTCGTGGGCAAGTGGGTGCTGTCTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432075.1 |
||
| CDS GCA 72 bp | CATAAGATGCCGCAGCATCGGCGTCACCGGGTTTTCTaGAGGCTCATTCCCGGAGCTGAAGTATTTCCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: HKMPQHRRHRVF*RLIPGAEVFPS Trigger: AGAGGGAAATACTTCAGCTCCGGGAATGAGCCTGCAGAAAACCCGGTGACGCCGATGCTGCGGCATCTTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000002125.9 ENST00000336237.10 ENST00000416653.5 ENST00000432075.1 ENST00000439218.5 ENST00000455230.5 ENST00000469831.1 ENST00000474154.5 |
||
| CDS GCA 72 bp | CTAACACTGCTTCCATCAGCCCCAGCTGCCTTGGGCTaGTCCGTCATCGGTACAACCCTAGCTATAGGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: LTLLPSAPAALG*SVIGTTLAIGK Trigger: TTTCCCTATAGCTAGGGTTGTACCGATGACGGAGCAGCCCAAGGCAGCTGGGGCTGATGGAAGCAGTGTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000474154.5 ENST00000474257.5 |
||
| CDS CCA 72 bp | CACCCTCAAAATATCTCCCACGAGGGTTCCCCTACCTaGGCCCAGTTCCACCAGCTGGAAAGCTGTGCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: HPQNISHEGSPT*AQFHQLESCAF Trigger: AAAAGCACAGCTTTCCAGCTGGTGGAACTGGGCCCAGGTAGGGGAACCCTCGTGGGAGATATTTTGAGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000002125.9 ENST00000336237.10 ENST00000416653.5 ENST00000431821.5 ENST00000432075.1 ENST00000439218.5 ENST00000469831.1 ENST00000474154.5 |
||
| CDS CAA 72 bp | TACTCGGCCACAGTGATGGGACCAGTAGACTTTATTTaGTACATAAGATGCCGCAGCATCGGCGTCACCGGG | + |
|
Preference number: 6 (lower is better) Translates to: YSATVMGPVDFI*YIRCRSIGVTG Trigger: CCCGGTGACGCCGATGCTGCGGCATCTTATGTACAAAATAAAGTCTACTGGTCCCATCACTGTGGCCGAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000002125.9 ENST00000336237.10 ENST00000416653.5 ENST00000432075.1 ENST00000439218.5 ENST00000455230.5 ENST00000469831.1 ENST00000474154.5 |
||
| CDS CAA 90 bp | TCCTTCATGTACTCGGCCACAGTGATGGGACCAGTAGACTTTATTTaGTACATAAGATGCCGCAGCATCGGCGTCACCGGGTTTTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SFMYSATVMGPVDFI*YIRCRSIGVTGFSA Trigger: TGCAGAAAACCCGGTGACGCCGATGCTGCGGCATCTTATGTACAAAATAAAGTCTACTGGTCCCATCACTGTGGCCGAGTACATGAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000002125.9 ENST00000336237.10 ENST00000416653.5 ENST00000432075.1 ENST00000439218.5 ENST00000455230.5 ENST00000469831.1 ENST00000474154.5 |
||
| CDS GCA 72 bp | ATGTTGTATGAAGGCTTCTGCTGGGGTGGCAGAAGGTaGCAAAACAAACCTCAGTTTATCAGAAACCTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: MLYEGFCWGGRR*QNKPQFIRNLK Trigger: TTTCAGGTTTCTGATAAACTGAGGTTTGTTTTGGCACCTTCTGCCACCCCAGCAGAAGCCTTCATACAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000474154.5 |
||
| CDS TCA 72 bp | TCGCCATCCCTGTGGTGTTTTCTCTACCAGATGTACTaGAATGTCACAATTTTTCAGCACAGATCCAAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SPSLWCFLYQMY*NVTIFQHRSKL Trigger: CAACTTGGATCTGTGCTGAAAAATTGTGACATTTCAGTACATCTGGTAGAGAAAACACCACAGGGATGGCGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000336237.10 |
||
| CDS TCA 72 bp | TCAAGACTCAAACTAGTCAATACTAGTCAGTATTCCTaGCTAGTACAGGGATTTTCCCCCACACCTTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SRLKLVNTSQYS*LVQGFSPTPCL Trigger: CAAGCAAGGTGTGGGGGAAAATCCCTGTACTAGTCAGGAATACTGACTAGTATTGACTAGTTTGAGTCTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000474154.5 ENST00000474257.5 |
||
| CDS CCA 72 bp | TTTTGGAACATCGTGCAGATCTCGGTACCAGGAAATTaGAATCCCAGACTTAGTGACACCTTTCATATACAC | + |
|
Preference number: 6 (lower is better) Translates to: FWNIVQISVPGN*NPRLSDTFHIH Trigger: GTGTATATGAAAGGTGTCACTAAGTCTGGGATTCCAATTTCCTGGTACCGAGATCTGCACGATGTTCCAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000002125.9 ENST00000431821.5 ENST00000439218.5 ENST00000469831.1 ENST00000474154.5 ENST00000483999.5 |
||
| CDS TCA 72 bp | TCTAACGGGACCTTCTCTTTAGTCAGTGTCAATGCTTaGATCTCACTTAATTTTTGGCTTACCTCTACCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SNGTFSLVSVNA*ISLNFWLTSTR Trigger: TCTGGTAGAGGTAAGCCAAAAATTAAGTGAGATTCAAGCATTGACACTGACTAAAGAGAAGGTCCCGTTAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000002125.9 ENST00000431821.5 ENST00000432075.1 ENST00000439218.5 ENST00000469831.1 ENST00000474154.5 ENST00000483999.5 |
||
| CDS TCA 72 bp | GTGCAAGATAAAAGCTGTACCCTCTACCAGATGTACTaGAATGTCACAATTTTTCAGCACAGATCCAAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: VQDKSCTLYQMY*NVTIFQHRSKL Trigger: CAACTTGGATCTGTGCTGAAAAATTGTGACATTTCAGTACATCTGGTAGAGGGTACAGCTTTTATCTTGCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000455230.5 |
||
| CDS CAA 90 bp | TGTGATCAAAATTCTTTCATTAATCCACATAAAGGTAATTACCTTTaGGAACATCGTGCAGATCTCGGTACCAGGAAATTGGAATCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: CDQNSFINPHKGNYL*EHRADLGTRKLESQ Trigger: CTGGGATTCCAATTTCCTGGTACCGAGATCTGCACGATGTTCCAAAAGGTAATTACCTTTATGTGGATTAATGAAAGAATTTTGATCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000469831.1 ENST00000474154.5 |
||