RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NDUFAF6 (Homo sapiens)

Ensembl gene IDs: ENSG00000156170

Ensembl transcript IDs: ENST00000396111.6, ENST00000396113.5, ENST00000396124.9, ENST00000454358.6, ENST00000517976.5, ENST00000518258.5, ENST00000518608.5, ENST00000519136.5, ENST00000519804.1, ENST00000520632.5, ENST00000520757.1, ENST00000521063.1, ENST00000521587.1, ENST00000521840.1, ENST00000522683.5, ENST00000523184.5, ENST00000523337.5, ENST00000523378.5

Found 579 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGACAGCACAGCAGACACTGTCTGGGCCAGGGGTGCCAATGGCAGTaGCTCTGCCAGAATCTCAGCAGTCTTGGCACCCTAGTCCCACGG +
Preference number: 1 (lower is better)
Translates to: GQHSRHCLGQGCQWQ*LCQNLSSLGTLVPR
Trigger: CCGTGGGACTAGGGTGCCAAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCAGACAGTGTCTGCTGTGCTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
3UTR GCA 90 bp CACAGCAGACACTGTCTGGGCCAGGGGTGCCAATGGCAGTGCCTCTaGCAGAATCTCAGCAGTCTTGGCACCCTAGTCCCACGGCAACTT +
Preference number: 1 (lower is better)
Translates to: HSRHCLGQGCQWQCL*QNLSSLGTLVPRQL
Trigger: AAGTTGCCGTGGGACTAGGGTGCCAAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCAGACAGTGTCTGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
3UTR CCA 90 bp TTCCAGGGACAGCACAGCAGACACTGTCTGGGCCAGGGGTGCCAATaGCAGTGCCTCTGCCAGAATCTCAGCAGTCTTGGCACCCTAGTC +
Preference number: 1 (lower is better)
Translates to: FQGQHSRHCLGQGCQ*QCLCQNLSSLGTLV
Trigger: GACTAGGGTGCCAAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCAGACAGTGTCTGCTGTGCTGTCCCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
3UTR GCA 90 bp GGGCTCTGTGAAGTCAATCTGGGGCCCAGAAACTGGGCCTGCCTCTaGTGGTGTGCAGACCTGAGAAGAGGTGTACCACTGTCAGGTCTG +
Preference number: 1 (lower is better)
Translates to: GLCEVNLGPRNWACL*WCADLRRGVPLSGL
Trigger: CAGACCTGACAGTGGTACACCTCTTCTCAGGTCTGCACACCAGCAGAGGCAGGCCCAGTTTCTGGGCCCCAGATTGACTTCACAGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517976.5
3UTR CCA 90 bp GGGGTTCTGGCTTTCCATCTTTACTGGGGCTCTGTGAAGTCAATCTaGGGCCCAGAAACTGGGCCTGCCTCTGCTGGTGTGCAGACCTTC +
Preference number: 1 (lower is better)
Translates to: GVLAFHLYWGSVKSI*GPETGPASAGVQTF
Trigger: GAAGGTCTGCACACCAGCAGAGGCAGGCCCAGTTTCTGGGCCCCAGATTGACTTCACAGAGCCCCAGTAAAGATGGAAAGCCAGAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520632.5
3UTR GCA 90 bp CATTCCTTCTCCCTGCCCACTGGCTCAAGTGTGGCTTATGGCCTATaGACAGCTACACCAATATTCCCTGTTGGAGCTCCAGCTTCCAGG +
Preference number: 1 (lower is better)
Translates to: HSFSLPTGSSVAYGL*TATPIFPVGAPASR
Trigger: CCTGGAAGCTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAGCCAGTGGGCAGGGAGAAGGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
3UTR CCA 90 bp CCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCTTaGCACCCTAGTCCCACGGCAACTTCTCAATTTTGTGAGCTACTT +
Preference number: 1 (lower is better)
Translates to: PGVPMAVPLPESQQS*HPSPTATSQFCELL
Trigger: AAGTAGCTCACAAAATTGAGAAGTTGCCGTGGGACTAGGGTGCCAAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
3UTR CCA 90 bp AGAATGACATTCCTTCTCCCTGCCCACTGGCTCAAGTGTGGCTTATaGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGCTCCAGC +
Preference number: 1 (lower is better)
Translates to: RMTFLLPAHWLKCGL*PMHSYTNIPCWSSS
Trigger: GCTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAGCCAGTGGGCAGGGAGAAGGAATGTCATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
3UTR CCA 90 bp TGCTGGTGTGCAGACCTGAGAAGAGGTGTACCACTGTCAGGTCTGTaGGTGGCTCCTGTTACAGAAACCCTCTTTTGGCAATCACTTCCA +
Preference number: 1 (lower is better)
Translates to: CWCADLRRGVPLSGL*VAPVTETLFWQSLP
Trigger: TGGAAGTGATTGCCAAAAGAGGGTTTCTGTAACAGGAGCCACCCACAGACCTGACAGTGGTACACCTCTTCTCAGGTCTGCACACCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517976.5
ENST00000522683.5
3UTR GCA 90 bp TTAAGCAAGAAGGTTTCCAAGCTCAAGTACCTGGAGAAGTGCGCATaGCTAGAACCAGAGTCCTTCAAATCTCTCTCCCAGTTGGCTTCA +
Preference number: 1 (lower is better)
Translates to: LSKKVSKLKYLEKCA*LEPESFKSLSQLAS
Trigger: TGAAGCCAACTGGGAGAGAGATTTGAAGGACTCTGGTTCTAGGCATGCGCACTTCTCCAGGTACTTGAGCTTGGAAACCTTCTTGCTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520757.1
3UTR CCA 90 bp AGGAGTTTCCGCTGTCCAAAGCTGGGACAACCTTCCATAGTTCAATaGCCACAGGCTGATGTGGTGGATTGTCACAGTATATATCTTCCA +
Preference number: 1 (lower is better)
Translates to: RSFRCPKLGQPSIVQ*PQADVVDCHSIYLP
Trigger: TGGAAGATATATACTGTGACAATCCACCACATCAGCCTGTGGCCATTGAACTATGGAAGGTTGTCCCAGCTTTGGACAGCGGAAACTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518258.5
3UTR TCA 90 bp CTGGTAATTCAAAATAGCGCAAGGAGAAGTGTGTGCGTGTTCGAGTaGAGCAAGATTGGCCTAGAGCTAGTTAAGCAAGAAGGTTTCCAA +
Preference number: 1 (lower is better)
Translates to: LVIQNSARRSVCVFE*SKIGLELVKQEGFQ
Trigger: TTGGAAACCTTCTTGCTTAACTAGCTCTAGGCCAATCTTGCTTCACTCGAACACGCACACACTTCTCCTTGCGCTATTTTGAATTACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520757.1
3UTR GCA 90 bp GCTCCCATGATATGGTGTTGCTCTCAAGCAAGTGACAATGCCTTGTaGTTTTCCAATATGACTTGCAGCATGATCTGCATGAAGATCCTT +
Preference number: 1 (lower is better)
Translates to: APMIWCCSQASDNAL*FSNMTCSMICMKIL
Trigger: AAGGATCTTCATGCAGATCATGCTGCAAGTCATATTGGAAAAGCACAAGGCATTGTCACTTGCTTGAGAGCAACACCATATCATGGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
3UTR GCA 90 bp ATCCATGGGAAGGAACACCTTTCTTCTGCTCCCATGATATGGTGTTaGTCTCAAGCAAGTGACAATGCCTTGTGCTTTTCCAATATGACT +
Preference number: 1 (lower is better)
Translates to: IHGKEHLSSAPMIWC*SQASDNALCFSNMT
Trigger: AGTCATATTGGAAAAGCACAAGGCATTGTCACTTGCTTGAGAGCAACACCATATCATGGGAGCAGAAGAAAGGTGTTCCTTCCCATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
3UTR GCA 90 bp TTCCAGCAAAGTGGCTCTCCTTTCCTGATTTTGATTTTGTGTAGTTaGCCAGTCTGGCTCACACTAACATCGACCTGTGTTTGTCAAAGA +
Preference number: 1 (lower is better)
Translates to: FQQSGSPFLILILCS*PVWLTLTSTCVCQR
Trigger: TCTTTGACAAACACAGGTCGATGTTAGTGTGAGCCAGACTGGGCAACTACACAAAATCAAAATCAGGAAAGGAGAGCCACTTTGCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520757.1
3UTR CCA 90 bp AGTGGCTCTCCTTTCCTGATTTTGATTTTGTGTAGTTGCCCAGTCTaGCTCACACTAACATCGACCTGTGTTTGTCAAAGATTCTCCTCT +
Preference number: 1 (lower is better)
Translates to: SGSPFLILILCSCPV*LTLTSTCVCQRFSS
Trigger: AGAGGAGAATCTTTGACAAACACAGGTCGATGTTAGTGTGAGCCAGACTGGGCAACTACACAAAATCAAAATCAGGAAAGGAGAGCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520757.1
3UTR TCA 90 bp AGCATACAAATATCCATGGGAAGGAACACCTTTCTTCTGCTCCCATaGTATGGTGTTGCTCTCAAGCAAGTGACAATGCCTTGTGCTTTT +
Preference number: 1 (lower is better)
Translates to: SIQISMGRNTFLLLP*YGVALKQVTMPCAF
Trigger: AAAAGCACAAGGCATTGTCACTTGCTTGAGAGCAACACCATATCATGGGAGCAGAAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
3UTR CCA 90 bp ACAAATATCCATGGGAAGGAACACCTTTCTTCTGCTCCCATGATATaGTGTTGCTCTCAAGCAAGTGACAATGCCTTGTGCTTTTCCAAT +
Preference number: 1 (lower is better)
Translates to: TNIHGKEHLSSAPMI*CCSQASDNALCFSN
Trigger: ATTGGAAAAGCACAAGGCATTGTCACTTGCTTGAGAGCAACACCATATCATGGGAGCAGAAGAAAGGTGTTCCTTCCCATGGATATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
3UTR-3UTR CCA 90 bp TCCAGGGACAGCACAGCAGACACTGTCTGGGCCAGGGGTGCCAATGGCAGTGCCGAATCTCAGCAGTCTTaGCACCCTAGTCCCACGGCA +
Preference number: 2 (lower is better)
Translates to: SRDSTADTVWARGANGSAESQQS*HPSPTA
Trigger: TGCCGTGGGACTAGGGTGCCAAGACTGCTGAGATTC...GGCACTGCCATTGGCACCCCTGGCCCAGACAGTGTCTGCTGTGCTGTCCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
3UTR-3UTR GCA 90 bp GAGGTGGAGGTTGTAGTGAGCCAAGGTCGTGCCATTGTACTCCAGCCTGGGCGACCCAGAAACTGGGCCTaGCTCTGCTGGTGTGCAGAC +
Preference number: 2 (lower is better)
Translates to: EVEVVVSQGRAIVLQPGRPRNWA*LCWCAD
Trigger: GTCTGCACACCAGCAGAGGCAGGCCCAGTTTCTGGG...TCGCCCAGGCTGGAGTACAATGGCACGACCTTGGCTCACTACAACCTCCACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520632.5
3UTR-3UTR CCA 90 bp CACCAATATTCCCTGTTGGAGCTCCAGCTTCCAGGGACAGCACAGCAGACACTGGGCCAGGGGTGCCAATaGCAGTGCCTCTGCCAGAAT +
Preference number: 2 (lower is better)
Translates to: HQYSLLELQLPGTAQQTLGQGCQ*QCLCQN
Trigger: ATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCC...CAGTGTCTGCTGTGCTGTCCCTGGAAGCTGGAGCTCCAACAGGGAATATTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
3UTR-3UTR TCA 90 bp GAGGTGGAGGTTGTAGTGAGCCAAGGTCGTGCCATTGTACTCCAGCCTGGGCGATCAATGGCCACAGGCTaGTGTGGTGGATTGTCACAG +
Preference number: 2 (lower is better)
Translates to: EVEVVVSQGRAIVLQPGRSMATG*CGGLSQ
Trigger: CTGTGACAATCCACCACATCAGCCTGTGGCCATTGA...TCGCCCAGGCTGGAGTACAATGGCACGACCTTGGCTCACTACAACCTCCACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518608.5
ENST00000520632.5
3UTR-3UTR GCA 90 bp GTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGCTCCAGTGTCTGGGCCAGGGGTaGCAATGGCAGTGCCTCTGC +
Preference number: 2 (lower is better)
Translates to: VWLMAYAQLHQYSLLELQCLGQG*QWQCLC
Trigger: GCAGAGGCACTGCCATTGGCACCCCTGGCCCAGACA...CTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
3UTR-3UTR GCA 90 bp CTGAGAAGAGGTGTACCACTGTCAGGTCTGTGGGTGGCTCCTGTTACAGAAACCCCCAGAAACTGGGCCTaGCTCTGCTGGTGTGCAGAC +
Preference number: 2 (lower is better)
Translates to: LRRGVPLSGLWVAPVTETPRNWA*LCWCAD
Trigger: GTCTGCACACCAGCAGAGGCAGGCCCAGTTTCTGGG...GGTTTCTGTAACAGGAGCCACCCACAGACCTGACAGTGGTACACCTCTTCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517976.5
3UTR-3UTR TCA 90 bp CCTCTGCTGGTGTGCAGACCTGAGAAGAGGTGTACCACTGTCAGGTCTGTGGGTTCAATGGCCACAGGCTaGTGTGGTGGATTGTCACAG +
Preference number: 2 (lower is better)
Translates to: PLLVCRPEKRCTTVRSVGSMATG*CGGLSQ
Trigger: CTGTGACAATCCACCACATCAGCCTGTGGCCATTGA...ACCCACAGACCTGACAGTGGTACACCTCTTCTCAGGTCTGCACACCAGCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517976.5
ENST00000522683.5
3UTR-3UTR CCA 90 bp GGAGGTGGAGGTTGTAGTGAGCCAAGGTCGTGCCATTGTACTCCAGCCTGGGCGGGCCACAGGCTGATGTaGTGGATTGTCACAGTATAT +
Preference number: 2 (lower is better)
Translates to: GGGGCSEPRSCHCTPAWAGHRLM*WIVTVY
Trigger: ATATACTGTGACAATCCACCACATCAGCCTGTGGCC...CGCCCAGGCTGGAGTACAATGGCACGACCTTGGCTCACTACAACCTCCACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518608.5
ENST00000520632.5
3UTR CAA 90 bp AAGTGCGCATGCCTAGAACCAGAGTCCTTCAAATCTCTCTCCCAGTaGGCTTCATTTTCCCAGGCTGGCTGGCTGTGCAAGACACACGCC +
Preference number: 2 (lower is better)
Translates to: KCACLEPESFKSLSQ*ASFSQAGWLCKTHA
Trigger: GGCGTGTGTCTTGCACAGCCAGCCAGCCTGGGAAAATGAAGCCAACTGGGAGAGAGATTTGAAGGACTCTGGTTCTAGGCATGCGCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520757.1
3UTR-3UTR GCA 90 bp GTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGCTCCAGCTGGGTGCCAATGGCAGTaGCTCTGCCAGAATCTCAGC +
Preference number: 2 (lower is better)
Translates to: VAYGLCTATPIFPVGAPAGCQWQ*LCQNLS
Trigger: GCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCC...AGCTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
3UTR-3UTR CCA 90 bp CTGGCTCAAGTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGGCCAGGGGTGCCAATaGCAGTGCCTCTGCCAGAAT +
Preference number: 2 (lower is better)
Translates to: LAQVWLMAYAQLHQYSLLGQGCQ*QCLCQN
Trigger: ATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCC...CAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
3UTR-3UTR CCA 90 bp TGGCTCAAGTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGACAGCAGACACTGTCTaGGCCAGGGGTGCCAATGGC +
Preference number: 2 (lower is better)
Translates to: WLKCGLWPMHSYTNIPCWTADTV*ARGANG
Trigger: GCCATTGGCACCCCTGGCCCAGACAGTGTCTGCTGT...CCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
3UTR-3UTR TCA 90 bp CCTGAGAAGAGGTGTACCACTGTCAGGTCTGTGGGTGGCTCCTGTTACAGAAACTCAATGGCCACAGGCTaGTGTGGTGGATTGTCACAG +
Preference number: 2 (lower is better)
Translates to: PEKRCTTVRSVGGSCYRNSMATG*CGGLSQ
Trigger: CTGTGACAATCCACCACATCAGCCTGTGGCCATTGA...GTTTCTGTAACAGGAGCCACCCACAGACCTGACAGTGGTACACCTCTTCTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517976.5
ENST00000522683.5
3UTR-3UTR GCA 90 bp CTGGCTCAAGTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGGGTGCCAATGGCAGTaGCTCTGCCAGAATCTCAGC +
Preference number: 2 (lower is better)
Translates to: LAQVWLMAYAQLHQYSLLGCQWQ*LCQNLS
Trigger: GCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCC...CAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
3UTR-3UTR CCA 90 bp GTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGCTCCAGGAATCTCAGCAGTCTTaGCACCCTAGTCCCACGGCA +
Preference number: 2 (lower is better)
Translates to: VWLMAYAQLHQYSLLELQESQQS*HPSPTA
Trigger: TGCCGTGGGACTAGGGTGCCAAGACTGCTGAGATTC...CTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
3UTR-3UTR GCA 90 bp TCATTTTCCCAGGCTGGCTGGCTGTGCAAGACACACGCCCTGAGTGTCTGCATCGGAACACCTTTCTTCTaGTCCCATGATATGGTGTTG +
Preference number: 2 (lower is better)
Translates to: SFSQAGWLCKTHALSVCIGTPFF*SHDMVL
Trigger: CAACACCATATCATGGGAGCAGAAGAAAGGTGTTCC...GATGCAGACACTCAGGGCGTGTGTCTTGCACAGCCAGCCAGCCTGGGAAAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520757.1
3UTR-3UTR CCA 90 bp CTGGCTCAAGTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAATCTCAGCAGTCTTaGCACCCTAGTCCCACGGCA +
Preference number: 2 (lower is better)
Translates to: LAQVWLMAYAQLHQYSLLESQQS*HPSPTA
Trigger: TGCCGTGGGACTAGGGTGCCAAGACTGCTGAGATTC...CAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
3UTR-3UTR CCA 90 bp GAGGTGGAGGTTGTAGTGAGCCAAGGTCGTGCCATTGTACTCCAGCCTGGGCGACACAGGCTGATGTGGTaGATTGTCACAGTATATATC +
Preference number: 2 (lower is better)
Translates to: EVEVVVSQGRAIVLQPGRHRLMW*IVTVYI
Trigger: GATATATACTGTGACAATCCACCACATCAGCCTGTG...TCGCCCAGGCTGGAGTACAATGGCACGACCTTGGCTCACTACAACCTCCACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518608.5
ENST00000520632.5
3UTR-3UTR TCA 90 bp CACCACTCTTTAGAGATTTCAAAGCCCCGGAGTCCACCCCACCAGCCTTCTGGGAGGTGCAAGTGTGCTTaGCTGGCAATGTCATATATT +
Preference number: 2 (lower is better)
Translates to: HHSLEISKPRSPPHQPSGRCKCA*LAMSYI
Trigger: AATATATGACATTGCCAGTCAAGCACACTTGCACCT...CCCAGAAGGCTGGTGGGGTGGACTCCGGGGCTTTGAAATCTCTAAAGAGTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520757.1
3UTR-3UTR CCA 90 bp GACCTGAGAAGAGGTGTACCACTGTCAGGTCTGTGGGTGGCTCCTGTTACAGAAGGCCACAGGCTGATGTaGTGGATTGTCACAGTATAT +
Preference number: 2 (lower is better)
Translates to: DLRRGVPLSGLWVAPVTEGHRLM*WIVTVY
Trigger: ATATACTGTGACAATCCACCACATCAGCCTGTGGCC...TTCTGTAACAGGAGCCACCCACAGACCTGACAGTGGTACACCTCTTCTCAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517976.5
ENST00000522683.5
3UTR CAA 90 bp CAGCCTTCTGGGAGATTCCAGCAAAGTGGCTCTCCTTTCCTGATTTaGATTTTGTGTAGTTGCCCAGTCTGGCTCACACTAACATCGACC +
Preference number: 2 (lower is better)
Translates to: QPSGRFQQSGSPFLI*ILCSCPVWLTLTST
Trigger: GGTCGATGTTAGTGTGAGCCAGACTGGGCAACTACACAAAATCAAAATCAGGAAAGGAGAGCCACTTTGCTGGAATCTCCCAGAAGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520757.1
3UTR-3UTR CCA 90 bp AGCCTGGGCGACAAGAGTGAGACTTCTTTCATCGACGATTTTCATAAGCCATCTCCTTCCATAGTTCAATaGCCACAGGCTGATGTGGTG +
Preference number: 2 (lower is better)
Translates to: SLGDKSETSFIDDFHKPSPSIVQ*PQADVV
Trigger: CACCACATCAGCCTGTGGCCATTGAACTATGGAAGG...AGATGGCTTATGAAAATCGTCGATGAAAGAAGTCTCACTCTTGTCGCCCAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518608.5
ENST00000520632.5
3UTR CAA 90 bp TCTGGGAGATTCCAGCAAAGTGGCTCTCCTTTCCTGATTTTGATTTaGTGTAGTTGCCCAGTCTGGCTCACACTAACATCGACCTGTGTT +
Preference number: 2 (lower is better)
Translates to: SGRFQQSGSPFLILI*CSCPVWLTLTSTCV
Trigger: AACACAGGTCGATGTTAGTGTGAGCCAGACTGGGCAACTACACAAAATCAAAATCAGGAAAGGAGAGCCACTTTGCTGGAATCTCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520757.1
3UTR-3UTR CCA 90 bp TGCTCTCAAGCAAGTGACAATGCCTTGTGCTTTTCCAATATGACTTGCAGCATGCCTTCCATAGTTCAATaGCCACAGGCTGATGTGGTG +
Preference number: 2 (lower is better)
Translates to: CSQASDNALCFSNMTCSMPSIVQ*PQADVV
Trigger: CACCACATCAGCCTGTGGCCATTGAACTATGGAAGG...CATGCTGCAAGTCATATTGGAAAAGCACAAGGCATTGTCACTTGCTTGAGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454358.6
ENST00000518258.5
ENST00000523337.5
3UTR-3UTR CCA 90 bp CATTTTTATCTTGGTTCCTCCGTAGAAAGTCCTCTTGTGAAACACCATGCAGCATGTCAGGTCTGTGGGTaGCTCCTGTTACAGAAACCC +
Preference number: 2 (lower is better)
Translates to: HFYLGSSVESPLVKHHAACQVCG*LLLQKP
Trigger: GGGTTTCTGTAACAGGAGCCACCCACAGACCTGACA...TGCTGCATGGTGTTTCACAAGAGGACTTTCTACGGAGGAACCAAGATAAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517976.5
3UTR-3UTR CCA 90 bp AATCCACTCGCTGAATTTTCTTTAGAAAGTCCTCTAGAGAAACCGTCTGAAGAATGGGCCTGCCTCTGCTaGTGTGCAGACCTGAGAAGA +
Preference number: 2 (lower is better)
Translates to: NPLAEFSLESPLEKPSEEWACLC*CADLRR
Trigger: TCTTCTCAGGTCTGCACACCAGCAGAGGCAGGCCCA...TTCTTCAGACGGTTTCTCTAGAGGACTTTCTAAAGAAAATTCAGCGAGTGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517976.5
3UTR-3UTR TCA 90 bp TCTTGTGAAACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTTCAATGGCCACAGGCTaGTGTGGTGGATTGTCACAG +
Preference number: 2 (lower is better)
Translates to: SCETPCSIQISMGRNTFLSMATG*CGGLSQ
Trigger: CTGTGACAATCCACCACATCAGCCTGTGGCCATTGA...AAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGTTTCACAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
3UTR-3UTR GCA 90 bp AGGGCAATTTCTAGGAGAGGTGAGTCACCACTCTTTAGAGATTTCAAAGCCCCGTTGATTTTGTGTAGTTaGCCAGTCTGGCTCACACTA +
Preference number: 2 (lower is better)
Translates to: RAISRRGESPLFRDFKAPLILCS*PVWLTL
Trigger: TAGTGTGAGCCAGACTGGGCAACTACACAAAATCAA...CGGGGCTTTGAAATCTCTAAAGAGTGGTGACTCACCTCTCCTAGAAATTGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520757.1
3UTR-3UTR CCA 90 bp TGTTGCTCTCAAGCAAGTGACAATGCCTTGTGCTTTTCCAATATGACTTGCAGCGGCCACAGGCTGATGTaGTGGATTGTCACAGTATAT +
Preference number: 2 (lower is better)
Translates to: CCSQASDNALCFSNMTCSGHRLM*WIVTVY
Trigger: ATATACTGTGACAATCCACCACATCAGCCTGTGGCC...GCTGCAAGTCATATTGGAAAAGCACAAGGCATTGTCACTTGCTTGAGAGCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000523337.5
3UTR-3UTR CCA 90 bp CATTTTTATCTTGGTTCCTCCGTAGAAAGTCCTCTTGTGAAACACCATGCAGCACCTTCCATAGTTCAATaGCCACAGGCTGATGTGGTG +
Preference number: 2 (lower is better)
Translates to: HFYLGSSVESPLVKHHAAPSIVQ*PQADVV
Trigger: CACCACATCAGCCTGTGGCCATTGAACTATGGAAGG...TGCTGCATGGTGTTTCACAAGAGGACTTTCTACGGAGGAACCAAGATAAAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000454358.6
ENST00000518258.5
3UTR-3UTR CCA 90 bp CATGCTTTAGGTGCAAGTGTGCTTGACTGGCAATGTCATATATTACATCTCTCATCTGTGAAGTCAATCTaGGGCCCAGAAACTGGGCCT +
Preference number: 2 (lower is better)
Translates to: HALGASVLDWQCHILHLSSVKSI*GPETGP
Trigger: AGGCCCAGTTTCTGGGCCCCAGATTGACTTCACAGA...TGAGAGATGTAATATATGACATTGCCAGTCAAGCACACTTGCACCTAAAGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517976.5
3UTR-3UTR CCA 90 bp GAAACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTCTGCTCTCTGCTCCCATGATATaGTGTTGCTCTCAAGCAAGT +
Preference number: 2 (lower is better)
Translates to: ETPCSIQISMGRNTFLLLSAPMI*CCSQAS
Trigger: ACTTGCTTGAGAGCAACACCATATCATGGGAGCAGA...GAGCAGAAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
3UTR-3UTR CCA 90 bp GTGAAACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTCTGCTCTGCTCCCATGATATaGTGTTGCTCTCAAGCAAGT +
Preference number: 2 (lower is better)
Translates to: VKHHAAYKYPWEGTPFFCSAPMI*CCSQAS
Trigger: ACTTGCTTGAGAGCAACACCATATCATGGGAGCAGA...GCAGAAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGTTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
3UTR-3UTR TCA 90 bp CATTTTTATCTTGGTTCCTCCGTAGAAAGTCCTCTTGTGAAACACCATGCAGCATTGCTCTCAAGCAAGTaGCAATGCCTTGTGCTTTTC +
Preference number: 2 (lower is better)
Translates to: HFYLGSSVESPLVKHHAALLSSK*QCLVLF
Trigger: GAAAAGCACAAGGCATTGTCACTTGCTTGAGAGCAA...TGCTGCATGGTGTTTCACAAGAGGACTTTCTACGGAGGAACCAAGATAAAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
3UTR-3UTR TCA 90 bp TTCCAATATGACTTGCAGCATGATCTGCATGAAGATCCTTTATACCCAATATTTGCTGGTGTGCAGACCTaGGAAGAGGTGTACCACTGT +
Preference number: 2 (lower is better)
Translates to: FQYDLQHDLHEDPLYPIFAGVQT*EEVYHC
Trigger: ACAGTGGTACACCTCTTCTCAGGTCTGCACACCAGC...AAATATTGGGTATAAAGGATCTTCATGCAGATCATGCTGCAAGTCATATTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517976.5
3UTR-3UTR CCA 90 bp TCTTGTGAAACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTGGCCACAGGCTGATGTaGTGGATTGTCACAGTATAT +
Preference number: 2 (lower is better)
Translates to: SCETPCSIQISMGRNTFLGHRLM*WIVTVY
Trigger: ATATACTGTGACAATCCACCACATCAGCCTGTGGCC...AAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGTTTCACAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
3UTR-3UTR CCA 90 bp GACTTGCAGCATGATCTGCATGAAGATCCTTTATACCCAATATTTCTAGTGTTATCTGTGAAGTCAATCTaGGGCCCAGAAACTGGGCCT +
Preference number: 2 (lower is better)
Translates to: DLQHDLHEDPLYPIFLVLSVKSI*GPETGP
Trigger: AGGCCCAGTTTCTGGGCCCCAGATTGACTTCACAGA...TAACACTAGAAATATTGGGTATAAAGGATCTTCATGCAGATCATGCTGCAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517976.5
ENST00000520632.5
3UTR CAA 90 bp TCTTTTAGTCAGATTATGTCTTTTAACAGCCTAGTGCCCAGACACTaGTCTCTACTACCATTCTCCTTAAAGGAATCAGGGCTCTCGAGA +
Preference number: 2 (lower is better)
Translates to: SFSQIMSFNSLVPRH*SLLPFSLKESGLSR
Trigger: TCTCGAGAGCCCTGATTCCTTTAAGGAGAATGGTAGTAGAGACAAGTGTCTGGGCACTAGGCTGTTAAAAGACATAATCTGACTAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518258.5
3UTR-3UTR TCA 90 bp ATGGGTGGAATATATCAAAATCCACTCGCTGAATTTTCTTTAGAAAGTCCTCTATCAATGGCCACAGGCTaGTGTGGTGGATTGTCACAG +
Preference number: 2 (lower is better)
Translates to: MGGIYQNPLAEFSLESPLSMATG*CGGLSQ
Trigger: CTGTGACAATCCACCACATCAGCCTGTGGCCATTGA...TAGAGGACTTTCTAAAGAAAATTCAGCGAGTGGATTTTGATATATTCCACCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
3UTR-3UTR TCA 90 bp CTCGCTGAATTTTCTTTAGAAAGTCCTCTAGAGAAACCGTCTGAAGAAAAGCAGTTGCTCTCAAGCAAGTaGCAATGCCTTGTGCTTTTC +
Preference number: 2 (lower is better)
Translates to: LAEFSLESPLEKPSEEKQLLSSK*QCLVLF
Trigger: GAAAAGCACAAGGCATTGTCACTTGCTTGAGAGCAA...CTGCTTTTCTTCAGACGGTTTCTCTAGAGGACTTTCTAAAGAAAATTCAGCGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
3UTR-3UTR TCA 90 bp CTCGCTGAATTTTCTTTAGAAAGTCCTCTAGAGAAACCGTCTGAAGAAAAGCAGTTTCTTCTGCTCCCATaGTATGGTGTTGCTCTCAAG +
Preference number: 2 (lower is better)
Translates to: LAEFSLESPLEKPSEEKQFLLLP*YGVALK
Trigger: CTTGAGAGCAACACCATATCATGGGAGCAGAAGAAA...CTGCTTTTCTTCAGACGGTTTCTCTAGAGGACTTTCTAAAGAAAATTCAGCGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
3UTR-3UTR TCA 90 bp CATGCTTTAGGTGCAAGTGTGCTTGACTGGCAATGTCATATATTACATCTCTCATTTCTTCTGCTCCCATaGTATGGTGTTGCTCTCAAG +
Preference number: 2 (lower is better)
Translates to: HALGASVLDWQCHILHLSFLLLP*YGVALK
Trigger: CTTGAGAGCAACACCATATCATGGGAGCAGAAGAAA...TGAGAGATGTAATATATGACATTGCCAGTCAAGCACACTTGCACCTAAAGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
3UTR-3UTR GCA 90 bp CATGCTTTAGGTGCAAGTGTGCTTGACTGGCAATGTCATATATTACATCTCTCAGGAACACCTTTCTTCTaGTCCCATGATATGGTGTTG +
Preference number: 2 (lower is better)
Translates to: HALGASVLDWQCHILHLSGTPFF*SHDMVL
Trigger: CAACACCATATCATGGGAGCAGAAGAAAGGTGTTCC...TGAGAGATGTAATATATGACATTGCCAGTCAAGCACACTTGCACCTAAAGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
3UTR-3UTR GCA 90 bp CTCTCACATTTTTATCTTGGTTCCTCCGTAGAAAGTCCTCTTGTGAAACACCATGGAACACCTTTCTTCTaGTCCCATGATATGGTGTTG +
Preference number: 2 (lower is better)
Translates to: LSHFYLGSSVESPLVKHHGTPFF*SHDMVL
Trigger: CAACACCATATCATGGGAGCAGAAGAAAGGTGTTCC...ATGGTGTTTCACAAGAGGACTTTCTACGGAGGAACCAAGATAAAAATGTGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
3UTR-3UTR CCA 90 bp GCTTTAGGTGCAAGTGTGCTTGACTGGCAATGTCATATATTACATCTCTCACATTCTGCTCCCATGATATaGTGTTGCTCTCAAGCAAGT +
Preference number: 2 (lower is better)
Translates to: ALGASVLDWQCHILHLSHSAPMI*CCSQAS
Trigger: ACTTGCTTGAGAGCAACACCATATCATGGGAGCAGA...ATGTGAGAGATGTAATATATGACATTGCCAGTCAAGCACACTTGCACCTAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
3UTR-3UTR CCA 90 bp GAAACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTCTGCTCCTCACATTTTTATCTTaGTTCCTCCGTAGAAAGTCC +
Preference number: 2 (lower is better)
Translates to: ETPCSIQISMGRNTFLLLLTFLS*FLRRKS
Trigger: GGACTTTCTACGGAGGAACCAAGATAAAAATGTGAG...GAGCAGAAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
3UTR-3UTR CCA 90 bp GATTCTCCTCTGGTAATTCAAAATAGCGCAAGGAGAAGTGTGTGCGTGTTCGAGGCAAGTGTGCTTGACTaGCAATGTCATATATTACAT +
Preference number: 2 (lower is better)
Translates to: DSPLVIQNSARRSVCVFEASVLD*QCHILH
Trigger: ATGTAATATATGACATTGCCAGTCAAGCACACTTGC...CTCGAACACGCACACACTTCTCCTTGCGCTATTTTGAATTACCAGAGGAGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520757.1
3UTR-3UTR GCA 90 bp GTGAAACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTCTGCTTTTCCAATATGACTTaGAGCATGATCTGCATGAAG +
Preference number: 2 (lower is better)
Translates to: VKHHAAYKYPWEGTPFFCFSNMT*SMICMK
Trigger: CTTCATGCAGATCATGCTGCAAGTCATATTGGAAAA...GCAGAAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGTTTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
3UTR-3UTR GCA 90 bp GCTTTAGGTGCAAGTGTGCTTGACTGGCAATGTCATATATTACATCTCTCACATCCCATGATATGGTGTTaGTCTCAAGCAAGTGACAAT +
Preference number: 2 (lower is better)
Translates to: ALGASVLDWQCHILHLSHPMIWC*SQASDN
Trigger: ATTGTCACTTGCTTGAGAGCAACACCATATCATGGG...ATGTGAGAGATGTAATATATGACATTGCCAGTCAAGCACACTTGCACCTAAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
3UTR-3UTR CCA 90 bp CTCTCACATTTTTATCTTGGTTCCTCCGTAGAAAGTCCTCTTGTGAAACACCATCACAGGCTGATGTGGTaGATTGTCACAGTATATATC +
Preference number: 2 (lower is better)
Translates to: LSHFYLGSSVESPLVKHHHRLMW*IVTVYI
Trigger: GATATATACTGTGACAATCCACCACATCAGCCTGTG...ATGGTGTTTCACAAGAGGACTTTCTACGGAGGAACCAAGATAAAAATGTGAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
3UTR-3UTR CCA 90 bp TCTTGTGAAACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTCACAGGCTGATGTGGTaGATTGTCACAGTATATATC +
Preference number: 2 (lower is better)
Translates to: SCETPCSIQISMGRNTFLHRLMW*IVTVYI
Trigger: GATATATACTGTGACAATCCACCACATCAGCCTGTG...AAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGTTTCACAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
3UTR-3UTR CCA 90 bp ATATTACATCTCTCACATTTTTATCTTGGTTCCTCCGTAGAAAGTCCTCTTGTGACTTCCATAGTTCAATaGCCACAGGCTGATGTGGTG +
Preference number: 2 (lower is better)
Translates to: ILHLSHFYLGSSVESPLVTSIVQ*PQADVV
Trigger: CACCACATCAGCCTGTGGCCATTGAACTATGGAAGT...CACAAGAGGACTTTCTACGGAGGAACCAAGATAAAAATGTGAGAGATGTAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517976.5
3UTR-3UTR GCA 90 bp CTCGCTGAATTTTCTTTAGAAAGTCCTCTAGAGAAACCGTCTGAAGAAAAGCAGACTTGCAGCATGATCTaGATGAAGATCCTTTATACC +
Preference number: 2 (lower is better)
Translates to: LAEFSLESPLEKPSEEKQTCSMI*MKILYT
Trigger: GGTATAAAGGATCTTCATGCAGATCATGCTGCAAGT...CTGCTTTTCTTCAGACGGTTTCTCTAGAGGACTTTCTAAAGAAAATTCAGCGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
3UTR-3UTR GCA 90 bp CTCTCACATTTTTATCTTGGTTCCTCCGTAGAAAGTCCTCTTGTGAAACACCATAGTGACAATGCCTTGTaGTTTTCCAATATGACTTGC +
Preference number: 2 (lower is better)
Translates to: LSHFYLGSSVESPLVKHHSDNAL*FSNMTC
Trigger: GCAAGTCATATTGGAAAAGCACAAGGCATTGTCACT...ATGGTGTTTCACAAGAGGACTTTCTACGGAGGAACCAAGATAAAAATGTGAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
3UTR-3UTR GCA 90 bp AATCCACTCGCTGAATTTTCTTTAGAAAGTCCTCTAGAGAAACCGTCTGAAGAACCCATGATATGGTGTTaGTCTCAAGCAAGTGACAAT +
Preference number: 2 (lower is better)
Translates to: NPLAEFSLESPLEKPSEEPMIWC*SQASDN
Trigger: ATTGTCACTTGCTTGAGAGCAACACCATATCATGGG...TTCTTCAGACGGTTTCTCTAGAGGACTTTCTAAAGAAAATTCAGCGAGTGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
3UTR-3UTR CCA 90 bp ATGGGTGGAATATATCAAAATCCACTCGCTGAATTTTCTTTAGAAAGTCCTCTAGGCCACAGGCTGATGTaGTGGATTGTCACAGTATAT +
Preference number: 2 (lower is better)
Translates to: MGGIYQNPLAEFSLESPLGHRLM*WIVTVY
Trigger: ATATACTGTGACAATCCACCACATCAGCCTGTGGCC...TAGAGGACTTTCTAAAGAAAATTCAGCGAGTGGATTTTGATATATTCCACCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
3UTR-3UTR TCA 90 bp CATATATTACATCTCTCACATTTTTATCTTGGTTCCTCCGTAGAAAGTCCTCTTTTGCTCTCAAGCAAGTaGCAATGCCTTGTGCTTTTC +
Preference number: 2 (lower is better)
Translates to: HILHLSHFYLGSSVESPLLLSSK*QCLVLF
Trigger: GAAAAGCACAAGGCATTGTCACTTGCTTGAGAGCAA...AAGAGGACTTTCTACGGAGGAACCAAGATAAAAATGTGAGAGATGTAATATATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
3UTR-3UTR TCA 90 bp CAATATGACTTGCAGCATGATCTGCATGAAGATCCTTTATACCCAATATTTCTATTGCTCTCAAGCAAGTaGCAATGCCTTGTGCTTTTC +
Preference number: 2 (lower is better)
Translates to: QYDLQHDLHEDPLYPIFLLLSSK*QCLVLF
Trigger: GAAAAGCACAAGGCATTGTCACTTGCTTGAGAGCAA...TAGAAATATTGGGTATAAAGGATCTTCATGCAGATCATGCTGCAAGTCATATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
ENST00000523337.5
3UTR-3UTR TCA 90 bp CAATATGACTTGCAGCATGATCTGCATGAAGATCCTTTATACCCAATATTTCTATTTCTTCTGCTCCCATaGTATGGTGTTGCTCTCAAG +
Preference number: 2 (lower is better)
Translates to: QYDLQHDLHEDPLYPIFLFLLLP*YGVALK
Trigger: CTTGAGAGCAACACCATATCATGGGAGCAGAAGAAA...TAGAAATATTGGGTATAAAGGATCTTCATGCAGATCATGCTGCAAGTCATATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
3UTR-3UTR GCA 90 bp TATATTACATCTCTCACATTTTTATCTTGGTTCCTCCGTAGAAAGTCCTCTTGTGGAACACCTTTCTTCTaGTCCCATGATATGGTGTTG +
Preference number: 2 (lower is better)
Translates to: YITSLTFLSWFLRRKSSCGTPFF*SHDMVL
Trigger: CAACACCATATCATGGGAGCAGAAGAAAGGTGTTCC...ACAAGAGGACTTTCTACGGAGGAACCAAGATAAAAATGTGAGAGATGTAATATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
3UTR-3UTR GCA 90 bp CATGCTTTAGGTGCAAGTGTGCTTGACTGGCAATGTCATATATTACATCTCTCATCTTGTGAAACACCATaGAGCATACAAATATCCATG +
Preference number: 2 (lower is better)
Translates to: HALGASVLDWQCHILHLSSCETP*SIQISM
Trigger: CATGGATATTTGTATGCTGCATGGTGTTTCACAAGA...TGAGAGATGTAATATATGACATTGCCAGTCAAGCACACTTGCACCTAAAGCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
3UTR-3UTR TCA 90 bp TATATTACATCTCTCACATTTTTATCTTGGTTCCTCCGTAGAAAGTCCTCTTGTAGGTGCAAGTGTGCTTaGCTGGCAATGTCATATATT +
Preference number: 2 (lower is better)
Translates to: YITSLTFLSWFLRRKSSCRCKCA*LAMSYI
Trigger: AATATATGACATTGCCAGTCAAGCACACTTGCACCT...ACAAGAGGACTTTCTACGGAGGAACCAAGATAAAAATGTGAGAGATGTAATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
3UTR-3UTR TCA 90 bp ATGGGTGGAATATATCAAAATCCACTCGCTGAATTTTCTTTAGAAAGTCCTCTATCTAGAGAAACCGTCTaGAGAAAAGCAGGAAATGCT +
Preference number: 2 (lower is better)
Translates to: MGGIYQNPLAEFSLESPLSRETV*RKAGNA
Trigger: AGCATTTCCTGCTTTTCTTCAGACGGTTTCTCTAGA...TAGAGGACTTTCTAAAGAAAATTCAGCGAGTGGATTTTGATATATTCCACCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
3UTR-3UTR GCA 90 bp GTTTTCAGCATAATTTTCCAGTTCCTTGATATTACGATATGCTTTGTCATCCAGCCCATGATATGGTGTTaGTCTCAAGCAAGTGACAAT +
Preference number: 2 (lower is better)
Translates to: VFSIIFQFLDITICFVIQPMIWC*SQASDN
Trigger: ATTGTCACTTGCTTGAGAGCAACACCATATCATGGG...CTGGATGACAAAGCATATCGTAATATCAAGGAACTGGAAAATTATGCTGAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
ENST00000523337.5
3UTR-3UTR CCA 90 bp CATATATTACATCTCTCACATTTTTATCTTGGTTCCTCCGTAGAAAGTCCTCTTCTCACATTTTTATCTTaGTTCCTCCGTAGAAAGTCC +
Preference number: 2 (lower is better)
Translates to: HILHLSHFYLGSSVESPLLTFLS*FLRRKS
Trigger: GGACTTTCTACGGAGGAACCAAGATAAAAATGTGAG...AAGAGGACTTTCTACGGAGGAACCAAGATAAAAATGTGAGAGATGTAATATATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
3UTR CAA 90 bp TACAATACCGTTCATATCACTTATACAAACTTTCTCAGTACAATTTaGTTCACGATCATGATAATGCTGAATGACAGAGTGAGGAAGTGG +
Preference number: 2 (lower is better)
Translates to: YNTVHITYTNFLSTI*FTIMIMLNDRVRKW
Trigger: CCACTTCCTCACTCTGTCATTCAGCATTATCATGATCGTGAACAAAATTGTACTGAGAAAGTTTGTATAAGTGATATGAACGGTATTGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
3UTR-3UTR GCA 90 bp ATATTACATCTCTCACATTTTTATCTTGGTTCCTCCGTAGAAAGTCCTCTTGTGAGTAATGTATTCTTCTaGTGTAAAGATGGGTGGAAT +
Preference number: 2 (lower is better)
Translates to: ILHLSHFYLGSSVESPLVSNVFF*CKDGWN
Trigger: ATTCCACCCATCTTTACAGCAGAAGAATACATTACT...CACAAGAGGACTTTCTACGGAGGAACCAAGATAAAAATGTGAGAGATGTAATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
3UTR-3UTR CCA 90 bp CATATATTACATCTCTCACATTTTTATCTTGGTTCCTCCGTAGAAAGTCCTCTTGCAAGTGTGCTTGACTaGCAATGTCATATATTACAT +
Preference number: 2 (lower is better)
Translates to: HILHLSHFYLGSSVESPLASVLD*QCHILH
Trigger: ATGTAATATATGACATTGCCAGTCAAGCACACTTGC...AAGAGGACTTTCTACGGAGGAACCAAGATAAAAATGTGAGAGATGTAATATATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
3UTR-3UTR GCA 90 bp ATGGGTGGAATATATCAAAATCCACTCGCTGAATTTTCTTTAGAAAGTCCTCTAAGTAATGTATTCTTCTaGTGTAAAGATGGGTGGAAT +
Preference number: 2 (lower is better)
Translates to: MGGIYQNPLAEFSLESPLSNVFF*CKDGWN
Trigger: ATTCCACCCATCTTTACAGCAGAAGAATACATTACT...TAGAGGACTTTCTAAAGAAAATTCAGCGAGTGGATTTTGATATATTCCACCCAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
3UTR GCA 72 bp CACTGTCTGGGCCAGGGGTGCCAATGGCAGTGCCTCTaGCAGAATCTCAGCAGTCTTGGCACCCTAGTCCCA +
Preference number: 3 (lower is better)
Translates to: HCLGQGCQWQCL*QNLSSLGTLVP
Trigger: TGGGACTAGGGTGCCAAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCAGACAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
3UTR CCA 72 bp CAGCACAGCAGACACTGTCTGGGCCAGGGGTGCCAATaGCAGTGCCTCTGCCAGAATCTCAGCAGTCTTGGC +
Preference number: 3 (lower is better)
Translates to: QHSRHCLGQGCQ*QCLCQNLSSLG
Trigger: GCCAAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCAGACAGTGTCTGCTGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
3UTR GCA 72 bp AGCAGACACTGTCTGGGCCAGGGGTGCCAATGGCAGTaGCTCTGCCAGAATCTCAGCAGTCTTGGCACCCTA +
Preference number: 3 (lower is better)
Translates to: SRHCLGQGCQWQ*LCQNLSSLGTL
Trigger: TAGGGTGCCAAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCAGACAGTGTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
3UTR GCA 72 bp TCTGGGGCCCAGAAACTGGGCCTGCCTCTGCTGGTGTaGAGACCTGAGAAGAGGTGTACCACTGTCAGGTCT +
Preference number: 3 (lower is better)
Translates to: SGAQKLGLPLLV*RPEKRCTTVRS
Trigger: AGACCTGACAGTGGTACACCTCTTCTCAGGTCTGCACACCAGCAGAGGCAGGCCCAGTTTCTGGGCCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517976.5
3UTR CCA 72 bp GCTTTCCATCTTTACTGGGGCTCTGTGAAGTCAATCTaGGGCCCAGAAACTGGGCCTGCCTCTGCTGGTGTG +
Preference number: 3 (lower is better)
Translates to: AFHLYWGSVKSI*GPETGPASAGV
Trigger: CACACCAGCAGAGGCAGGCCCAGTTTCTGGGCCCCAGATTGACTTCACAGAGCCCCAGTAAAGATGGAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517976.5
ENST00000520632.5
3UTR CCA 72 bp GATTTCAAAGCCCCGGAGTCCACCCCACCAGCCTTCTaGGAGATTCCAGCAAAGTGGCTCTCCTTTCCTGAT +
Preference number: 3 (lower is better)
Translates to: DFKAPESTPPAF*EIPAKWLSFPD
Trigger: ATCAGGAAAGGAGAGCCACTTTGCTGGAATCTCCCAGAAGGCTGGTGGGGTGGACTCCGGGGCTTTGAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520757.1
3UTR GCA 72 bp TCCCTGCCCACTGGCTCAAGTGTGGCTTATGGCCTATaGACAGCTACACCAATATTCCCTGTTGGAGCTCCA +
Preference number: 3 (lower is better)
Translates to: SLPTGSSVAYGL*TATPIFPVGAP
Trigger: TGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAGCCAGTGGGCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
3UTR GCA 72 bp TCCCAGTTGGCTTCATTTTCCCAGGCTGGCTGGCTGTaGAAGACACACGCCCTGAGTGTCTGCATCCTTAAT +
Preference number: 3 (lower is better)
Translates to: SQLASFSQAGWL*KTHALSVCILN
Trigger: ATTAAGGATGCAGACACTCAGGGCGTGTGTCTTGCACAGCCAGCCAGCCTGGGAAAATGAAGCCAACTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520757.1
3UTR CCA 72 bp CCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCTTaGCACCCTAGTCCCACGGCAACTTCTCAATTTTGT +
Preference number: 3 (lower is better)
Translates to: PMAVPLPESQQS*HPSPTATSQFC
Trigger: ACAAAATTGAGAAGTTGCCGTGGGACTAGGGTGCCAAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
3UTR CCA 72 bp GCAGACCTGAGAAGAGGTGTACCACTGTCAGGTCTGTaGGTGGCTCCTGTTACAGAAACCCTCTTTTGGCAA +
Preference number: 3 (lower is better)
Translates to: ADLRRGVPLSGL*VAPVTETLFWQ
Trigger: TTGCCAAAAGAGGGTTTCTGTAACAGGAGCCACCCACAGACCTGACAGTGGTACACCTCTTCTCAGGTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517976.5
ENST00000522683.5
3UTR-3UTR CAA 90 bp GAGGTGGAGGTTGTAGTGAGCCAAGGTCGTGCCATTGTACTCCAGCCTGGGCGATTCGCATCAGTCCAATaGTTTTCTCAGAGACTGAGT +
Preference number: 3 (lower is better)
Translates to: EVEVVVSQGRAIVLQPGRFASVQ*FSQRLS
Trigger: ACTCAGTCTCTGAGAAAACAATTGGACTGATGCGAA...TCGCCCAGGCTGGAGTACAATGGCACGACCTTGGCTCACTACAACCTCCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520632.5
3UTR CCA 72 bp CTGCCTCTGCTGGTGTGCAGACCTTCCATAGTTCAATaGCCACAGGCTGATGTGGTGGATTGTCACAGTATA +
Preference number: 3 (lower is better)
Translates to: LPLLVCRPSIVQ*PQADVVDCHSI
Trigger: TATACTGTGACAATCCACCACATCAGCCTGTGGCCATTGAACTATGGAAGGTCTGCACACCAGCAGAGGCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520632.5
3UTR GCA 72 bp AAGGTTTCCAAGCTCAAGTACCTGGAGAAGTGCGCATaGCTAGAACCAGAGTCCTTCAAATCTCTCTCCCAG +
Preference number: 3 (lower is better)
Translates to: KVSKLKYLEKCA*LEPESFKSLSQ
Trigger: CTGGGAGAGAGATTTGAAGGACTCTGGTTCTAGGCATGCGCACTTCTCCAGGTACTTGAGCTTGGAAACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520757.1
3UTR CCA 72 bp CGCTGTCCAAAGCTGGGACAACCTTCCATAGTTCAATaGCCACAGGCTGATGTGGTGGATTGTCACAGTATA +
Preference number: 3 (lower is better)
Translates to: RCPKLGQPSIVQ*PQADVVDCHSI
Trigger: TATACTGTGACAATCCACCACATCAGCCTGTGGCCATTGAACTATGGAAGGTTGTCCCAGCTTTGGACAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518258.5
3UTR GCA 72 bp AGCAAGAAGGTTTCCAAGCTCAAGTACCTGGAGAAGTaGGCATGCCTAGAACCAGAGTCCTTCAAATCTCTC +
Preference number: 3 (lower is better)
Translates to: SKKVSKLKYLEK*ACLEPESFKSL
Trigger: GAGAGATTTGAAGGACTCTGGTTCTAGGCATGCGCACTTCTCCAGGTACTTGAGCTTGGAAACCTTCTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520757.1
3UTR CCA 72 bp CATGGGAAGGAACACCTTTCTTCTGCTCCCATGATATaGTGTTGCTCTCAAGCAAGTGACAATGCCTTGTGC +
Preference number: 3 (lower is better)
Translates to: HGKEHLSSAPMI*CCSQASDNALC
Trigger: GCACAAGGCATTGTCACTTGCTTGAGAGCAACACCATATCATGGGAGCAGAAGAAAGGTGTTCCTTCCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
3UTR TCA 72 bp ATATCCATGGGAAGGAACACCTTTCTTCTGCTCCCATaGTATGGTGTTGCTCTCAAGCAAGTGACAATGCCT +
Preference number: 3 (lower is better)
Translates to: ISMGRNTFLLLP*YGVALKQVTMP
Trigger: AGGCATTGTCACTTGCTTGAGAGCAACACCATATCATGGGAGCAGAAGAAAGGTGTTCCTTCCCATGGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
3UTR TCA 72 bp CAAAATAGCGCAAGGAGAAGTGTGTGCGTGTTCGAGTaGAGCAAGATTGGCCTAGAGCTAGTTAAGCAAGAA +
Preference number: 3 (lower is better)
Translates to: QNSARRSVCVFE*SKIGLELVKQE
Trigger: TTCTTGCTTAACTAGCTCTAGGCCAATCTTGCTTCACTCGAACACGCACACACTTCTCCTTGCGCTATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520757.1
3UTR GCA 72 bp AAGGAACACCTTTCTTCTGCTCCCATGATATGGTGTTaGTCTCAAGCAAGTGACAATGCCTTGTGCTTTTCC +
Preference number: 3 (lower is better)
Translates to: KEHLSSAPMIWC*SQASDNALCFS
Trigger: GGAAAAGCACAAGGCATTGTCACTTGCTTGAGAGCAACACCATATCATGGGAGCAGAAGAAAGGTGTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
3UTR-3UTR CAA 90 bp ACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTCTGCTCCCACTTTTCCAATATGACTaGCAGCATGATCTGCATGAA +
Preference number: 3 (lower is better)
Translates to: TPCSIQISMGRNTFLLLPLFQYD*QHDLHE
Trigger: TTCATGCAGATCATGCTGCAAGTCATATTGGAAAAG...TGGGAGCAGAAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
3UTR TCA 72 bp AGAAAAGCAGGAAATGCTTTCACAGGAACAGTTTTGTaGAAGGACCTAGCATGCTTTAGGTGCAAGTGTGCT +
Preference number: 3 (lower is better)
Translates to: RKAGNAFTGTVL*KDLACFRCKCA
Trigger: AGCACACTTGCACCTAAAGCATGCTAGGTCCTTTCACAAAACTGTTCCTGTGAAAGCATTTCCTGCTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
3UTR-3UTR CAA 90 bp TGTTGCTCTCAAGCAAGTGACAATGCCTTGTGCTTTTCCAATATGACTTGCAGCCTTTTCCAATATGACTaGCAGCATGATCTGCATGAA +
Preference number: 3 (lower is better)
Translates to: CCSQASDNALCFSNMTCSLFQYD*QHDLHE
Trigger: TTCATGCAGATCATGCTGCAAGTCATATTGGAAAAG...GCTGCAAGTCATATTGGAAAAGCACAAGGCATTGTCACTTGCTTGAGAGCAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
ENST00000523337.5
3UTR-3UTR CAA 90 bp TCTCAAGCAAGTGACAATGCCTTGTGCTTTTCCAATATGACTTGCAGCATGATCGCAAGTGACAATGCCTaGTGCTTTTCCAATATGACT +
Preference number: 3 (lower is better)
Translates to: SQASDNALCFSNMTCSMIASDNA*CFSNMT
Trigger: AGTCATATTGGAAAAGCACAAGGCATTGTCACTTGC...GATCATGCTGCAAGTCATATTGGAAAAGCACAAGGCATTGTCACTTGCTTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
ENST00000523337.5
3UTR-3UTR CAA 90 bp CTCTCACATTTTTATCTTGGTTCCTCCGTAGAAAGTCCTCTTGTGAAACACCATTTCGCATCAGTCCAATaGTTTTCTCAGAGACTGAGT +
Preference number: 3 (lower is better)
Translates to: LSHFYLGSSVESPLVKHHFASVQ*FSQRLS
Trigger: ACTCAGTCTCTGAGAAAACAATTGGACTGATGCGAA...ATGGTGTTTCACAAGAGGACTTTCTACGGAGGAACCAAGATAAAAATGTGAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
3UTR-3UTR CAA 90 bp TTCCAAAACTGCATTCGCATCAGTCCAATTGTTTTCTCAGAGACTGAGTCTTTATTCGCATCAGTCCAATaGTTTTCTCAGAGACTGAGT +
Preference number: 3 (lower is better)
Translates to: FQNCIRISPIVFSETESLFASVQ*FSQRLS
Trigger: ACTCAGTCTCTGAGAAAACAATTGGACTGATGCGAA...TAAAGACTCAGTCTCTGAGAAAACAATTGGACTGATGCGAATGCAGTTTTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000518258.5
ENST00000522683.5
ENST00000523337.5
3UTR CCA 72 bp GTGAATTGTGTGAGGAAGGAGGGAACTGCCTCTTTCTaGTCAAAGGTTGATTTTTCTAATGATGTCACATTA +
Preference number: 3 (lower is better)
Translates to: VNCVRKEGTASF*SKVDFSNDVTL
Trigger: TAATGTGACATCATTAGAAAAATCAACCTTTGACCAGAAAGAGGCAGTTCCCTCCTTCCTCACACAATTCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520757.1
3UTR TCA 72 bp CTGCATTCGCATCAGTCCAATTGTTTTCTCAGAGACTaGGTCTTTAACTTTTCCATATGTGAAGTTACTTCC +
Preference number: 3 (lower is better)
Translates to: LHSHQSNCFLRD*VFNFSICEVTS
Trigger: GGAAGTAACTTCACATATGGAAAAGTTAAAGACTCAGTCTCTGAGAAAACAATTGGACTGATGCGAATGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518258.5
ENST00000522683.5
ENST00000523337.5
3UTR-3UTR CAA 90 bp TTCCAATATGACTTGCAGCATGATCTGCATGAAGATCCTTTATACCCAATATTTTTCGCATCAGTCCAATaGTTTTCTCAGAGACTGAGT +
Preference number: 3 (lower is better)
Translates to: FQYDLQHDLHEDPLYPIFFASVQ*FSQRLS
Trigger: ACTCAGTCTCTGAGAAAACAATTGGACTGATGCGAA...AAATATTGGGTATAAAGGATCTTCATGCAGATCATGCTGCAAGTCATATTGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000523337.5
3UTR-3UTR CAA 90 bp ATTCGCATCAGTCCAATTGTTTTCTCAGAGACTGAGTCTTTAACTTTTCCATATTTCGCATCAGTCCAATaGTTTTCTCAGAGACTGAGT +
Preference number: 3 (lower is better)
Translates to: IRISPIVFSETESLTFPYFASVQ*FSQRLS
Trigger: ACTCAGTCTCTGAGAAAACAATTGGACTGATGCGAA...ATATGGAAAAGTTAAAGACTCAGTCTCTGAGAAAACAATTGGACTGATGCGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000518258.5
ENST00000522683.5
ENST00000523337.5
3UTR-3UTR CAA 90 bp TATATTACATCTCTCACATTTTTATCTTGGTTCCTCCGTAGAAAGTCCTCTTGTGCAAGTGACAATGCCTaGTGCTTTTCCAATATGACT +
Preference number: 3 (lower is better)
Translates to: YITSLTFLSWFLRRKSSCASDNA*CFSNMT
Trigger: AGTCATATTGGAAAAGCACAAGGCATTGTCACTTGC...ACAAGAGGACTTTCTACGGAGGAACCAAGATAAAAATGTGAGAGATGTAATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
3UTR-3UTR CAA 90 bp CAATATGACTTGCAGCATGATCTGCATGAAGATCCTTTATACCCAATATTTCTAGCAAGTGACAATGCCTaGTGCTTTTCCAATATGACT +
Preference number: 3 (lower is better)
Translates to: QYDLQHDLHEDPLYPIFLASDNA*CFSNMT
Trigger: AGTCATATTGGAAAAGCACAAGGCATTGTCACTTGC...TAGAAATATTGGGTATAAAGGATCTTCATGCAGATCATGCTGCAAGTCATATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
ENST00000523337.5
3UTR TCA 72 bp TGTAAAGATGGGTGGAATATATCAAAATCCACTCGCTaGATTTTCTTTAGAAAGTCCTCTAGAGAAACCGTC +
Preference number: 3 (lower is better)
Translates to: CKDGWNISKSTR*IFFRKSSRETV
Trigger: GACGGTTTCTCTAGAGGACTTTCTAAAGAAAATTCAGCGAGTGGATTTTGATATATTCCACCCATCTTTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
3UTR-3UTR CAA 90 bp CATATATTACATCTCTCACATTTTTATCTTGGTTCCTCCGTAGAAAGTCCTCTTCTTTTCCAATATGACTaGCAGCATGATCTGCATGAA +
Preference number: 3 (lower is better)
Translates to: HILHLSHFYLGSSVESPLLFQYD*QHDLHE
Trigger: TTCATGCAGATCATGCTGCAAGTCATATTGGAAAAG...AAGAGGACTTTCTACGGAGGAACCAAGATAAAAATGTGAGAGATGTAATATATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
3UTR-3UTR CAA 90 bp GTTTTCAGCATAATTTTCCAGTTCCTTGATATTACGATATGCTTTGTCATCCAGCTTTTCCAATATGACTaGCAGCATGATCTGCATGAA +
Preference number: 3 (lower is better)
Translates to: VFSIIFQFLDITICFVIQLFQYD*QHDLHE
Trigger: TTCATGCAGATCATGCTGCAAGTCATATTGGAAAAG...CTGGATGACAAAGCATATCGTAATATCAAGGAACTGGAAAATTATGCTGAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
ENST00000523337.5
CDS-3UTR GCA 90 bp CTGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCTTGGCGGCAGTAGTGGTCAGTaGCCCAGGCGCCCGGTCCGC +
Preference number: 4 (lower is better)
Translates to: LGQGCQWQCLCQNLSSLGGSSGQ*PRRPVR
Trigger: GCGGACCGGGCGCCTGGGGCACTGACCACTACTGCC...GCCAAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396124.9
CDS-3UTR GCA 90 bp TGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCTTGGCACCCCAGACAGAGCCGTaGGCGGAGGCCGCCATGACG +
Preference number: 4 (lower is better)
Translates to: WARGANGSASARISAVLAPQTEP*AEAAMT
Trigger: CGTCATGGCGGCCTCCGCGCACGGCTCTGTCTGGGG...TGCCAAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396124.9
CDS-3UTR GCA 90 bp GAGGTGGAGGTTGTAGTGAGCCAAGGTCGTGCCATTGTACTCCAGCCTGGGCGAAGCACAGGCCGGGGATaGCAAGCCGCAACGGCCCCC +
Preference number: 4 (lower is better)
Translates to: EVEVVVSQGRAIVLQPGRSTGRG*QAATAP
Trigger: GGGGGCCGTTGCGGCTTGGCATCCCCGGCCTGTGCT...TCGCCCAGGCTGGAGTACAATGGCACGACCTTGGCTCACTACAACCTCCACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520632.5
CDS-3UTR GCA 90 bp CCTCTGCTGGTGTGCAGACCTGAGAAGAGGTGTACCACTGTCAGGTCTGTGGGTCGGGCAGCCGCCGCATaGGCGCGTACAGACCCAGAG +
Preference number: 4 (lower is better)
Translates to: PLLVCRPEKRCTTVRSVGRAAAA*ARTDPE
Trigger: CTCTGGGTCTGTACGCGCGCATGCGGCGGCTGCCCG...ACCCACAGACCTGACAGTGGTACACCTCTTCTCAGGTCTGCACACCAGCAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517976.5
ENST00000522683.5
CDS-3UTR TCA 90 bp TCCAGGGACAGCACAGCAGACACTGTCTGGGCCAGGGGTGCCAATGGCAGTGCCGGCTGCAACTTTCGTTaGGAGTACATGGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SRDSTADTVWARGANGSAGCNFR*EYMGRG
Trigger: GCCCCTCCCCATGTACTCTCAACGAAAGTTGCAGCC...GGCACTGCCATTGGCACCCCTGGCCCAGACAGTGTCTGCTGTGCTGTCCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS-3UTR GCA 90 bp ACTGTCTGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCTGTCTGGGCCAGGGGTaGCAATGGCAGTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: TVWARGANGSASARISAVCLGQG*QWQCLC
Trigger: GCAGAGGCACTGCCATTGGCACCCCTGGCCCAGACA...GACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCAGACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp CTGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCTTGGCGGGTGCCAATGGCAGTaGCTCTGCCAGAATCTCAGC +
Preference number: 4 (lower is better)
Translates to: LGQGCQWQCLCQNLSSLGGCQWQ*LCQNLS
Trigger: GCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCC...GCCAAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CCA 90 bp CACCAATATTCCCTGTTGGAGCTCCAGCTTCCAGGGACAGCACAGCAGACACTGGTCGCGGACCGGGACTaGGGAGAGCAGAGCCGCACT +
Preference number: 4 (lower is better)
Translates to: HQYSLLELQLPGTAQQTLVADRD*GEQSRT
Trigger: AGTGCGGCTCTGCTCTCCCCAGTCCCGGTCCGCGAC...CAGTGTCTGCTGTGCTGTCCCTGGAAGCTGGAGCTCCAACAGGGAATATTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS-3UTR CCA 90 bp ACTGTCTGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCACAGCAGACACTGTCTaGGCCAGGGGTGCCAATGGC +
Preference number: 4 (lower is better)
Translates to: TVWARGANGSASARISAVTADTV*ARGANG
Trigger: GCCATTGGCACCCCTGGCCCAGACAGTGTCTGCTGT...GACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCAGACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp ACTGTCTGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCAGAGGTGGCTGCCTCTaGCTCCCAAAGTGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: TVWARGANGSASARISAVRGGCL*LPKCWD
Trigger: ATCCCAGCACTTTGGGAGGCAGAGGCAGCCACCTCT...GACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCAGACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS-3UTR GCA 90 bp GTACCACTGTCAGGTCTGTGGGTGGCTCCTGTTACAGAAACCCTCTTTTGGCAAGGCAGTAGTGGTCAGTaGCCCAGGCGCCCGGTCCGC +
Preference number: 4 (lower is better)
Translates to: VPLSGLWVAPVTETLFWQGSSGQ*PRRPVR
Trigger: GCGGACCGGGCGCCTGGGGCACTGACCACTACTGCC...TTGCCAAAAGAGGGTTTCTGTAACAGGAGCCACCCACAGACCTGACAGTGGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517976.5
ENST00000522683.5
CDS-3UTR GCA 90 bp TGGCTGTGCAAGACACACGCCCTGAGTGTCTGCATCCTTAATTTCCGTCTGAAGGGCAGTAGTGGTCAGTaGCCCAGGCGCCCGGTCCGC +
Preference number: 4 (lower is better)
Translates to: WLCKTHALSVCILNFRLKGSSGQ*PRRPVR
Trigger: GCGGACCGGGCGCCTGGGGCACTGACCACTACTGCC...CTTCAGACGGAAATTAAGGATGCAGACACTCAGGGCGTGTGTCTTGCACAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520757.1
CDS-3UTR GCA 90 bp TCTGTGAAGTCAATCTGGGGCCCAGAAACTGGGCCTGCCTCTGCTGGTGTGCAGCCCAGAAACTGGGCCTaGCTCTGCTGGTGTGCAGAC +
Preference number: 4 (lower is better)
Translates to: SVKSIWGPETGPASAGVQPRNWA*LCWCAD
Trigger: GTCTGCACACCAGCAGAGGCAGGCCCAGTTTCTGGG...CTGCACACCAGCAGAGGCAGGCCCAGTTTCTGGGCCCCAGATTGACTTCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517976.5
ENST00000520632.5
CDS-3UTR CCA 90 bp TCCAGGGACAGCACAGCAGACACTGTCTGGGCCAGGGGTGCCAATGGCAGTGCCCTCTTGAGCAGAGGGTaGAGCTCCAGACACTTCATG +
Preference number: 4 (lower is better)
Translates to: SRDSTADTVWARGANGSALLSRG*SSRHFM
Trigger: CATGAAGTGTCTGGAGCTCCACCCTCTGCTCAAGAG...GGCACTGCCATTGGCACCCCTGGCCCAGACAGTGTCTGCTGTGCTGTCCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396111.6
ENST00000396113.5
CDS-3UTR CCA 90 bp CTGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCTTGGCGCAGAACCCCGGTGGTaGGTGTTACCCTTTCATCAC +
Preference number: 4 (lower is better)
Translates to: LGQGCQWQCLCQNLSSLGAEPRW*VLPFHH
Trigger: GTGATGAAAGGGTAACACCCACCACCGGGGTTCTGC...GCCAAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS-3UTR CCA 90 bp TCCAGGGACAGCACAGCAGACACTGTCTGGGCCAGGGGTGCCAATGGCAGTGCCGTAGCAGAACCCCGGTaGTGGGTGTTACCCTTTCAT +
Preference number: 4 (lower is better)
Translates to: SRDSTADTVWARGANGSAVAEPR*WVLPFH
Trigger: ATGAAAGGGTAACACCCACCACCGGGGTTCTGCTAC...GGCACTGCCATTGGCACCCCTGGCCCAGACAGTGTCTGCTGTGCTGTCCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS-3UTR TCA 90 bp TCCAGGGACAGCACAGCAGACACTGTCTGGGCCAGGGGTGCCAATGGCAGTGCCGCCCCTATGATAACTTaGGCCCTTTCCCCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: SRDSTADTVWARGANGSAAPMIT*ALSPFL
Trigger: AAGGAAAGGGGAAAGGGCTCAAGTTATCATAGGGGC...GGCACTGCCATTGGCACCCCTGGCCCAGACAGTGTCTGCTGTGCTGTCCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR TCA 90 bp CTGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCTTGGCCACTTCATGGGTTGTTaGGAGGTGGCTCCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: LGQGCQWQCLCQNLSSLGHFMGC*EVAPVS
Trigger: AGAGACTGGAGCCACCTCTCAACAACCCATGAAGTG...GCCAAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396111.6
CDS-3UTR GCA 90 bp CTGGCTCAAGTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGTGGGCGGGCTGGAAATaGCTTCCCTGGGCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: LAQVWLMAYAQLHQYSLLWAGWK*LPWARR
Trigger: GCGGCGCGCCCAGGGAAGGCATTTCCAGCCCGCCCA...CAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS-3UTR GCA 90 bp ACTGTCTGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCTTGTTGAGAGGTGGCTaGCTCTGCCTCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: TVWARGANGSASARISAVLLRGG*LCLPKC
Trigger: GCACTTTGGGAGGCAGAGGCAGCCACCTCTCAACAA...GACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCAGACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS-3UTR GCA 90 bp CACCAATATTCCCTGTTGGAGCTCCAGCTTCCAGGGACAGCACAGCAGACACTGTGTCTGGGCCAGGGGTaGCAATGGCAGTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: HQYSLLELQLPGTAQQTLCLGQG*QWQCLC
Trigger: GCAGAGGCACTGCCATTGGCACCCCTGGCCCAGACA...CAGTGTCTGCTGTGCTGTCCCTGGAAGCTGGAGCTCCAACAGGGAATATTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp CTGGCTCAAGTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGAGCACAGGCCGGGGATaGCAAGCCGCAACGGCCCCC +
Preference number: 4 (lower is better)
Translates to: LAQVWLMAYAQLHQYSLLSTGRG*QAATAP
Trigger: GGGGGCCGTTGCGGCTTGGCATCCCCGGCCTGTGCT...CAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396124.9
CDS-3UTR GCA 90 bp CAGGTCTGTGGGTGGCTCCTGTTACAGAAACCCTCTTTTGGCAATCACTTCCATAGCACAGGCCGGGGATaGCAAGCCGCAACGGCCCCC +
Preference number: 4 (lower is better)
Translates to: QVCGWLLLQKPSFGNHFHSTGRG*QAATAP
Trigger: GGGGGCCGTTGCGGCTTGGCATCCCCGGCCTGTGCT...ATGGAAGTGATTGCCAAAAGAGGGTTTCTGTAACAGGAGCCACCCACAGACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517976.5
CDS-3UTR GCA 90 bp CAGGTCTGTGGGTGGCTCCTGTTACAGAAACCCTCTTTTGGCAATCACTTCCATGGCAGTAGTGGTCAGTaGCCCAGGCGCCCGGTCCGC +
Preference number: 4 (lower is better)
Translates to: QVCGWLLLQKPSFGNHFHGSSGQ*PRRPVR
Trigger: GCGGACCGGGCGCCTGGGGCACTGACCACTACTGCC...ATGGAAGTGATTGCCAAAAGAGGGTTTCTGTAACAGGAGCCACCCACAGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517976.5
ENST00000522683.5
CDS-3UTR GCA 90 bp TCATTTTCCCAGGCTGGCTGGCTGTGCAAGACACACGCCCTGAGTGTCTGCATCCCCAGAAACTGGGCCTaGCTCTGCTGGTGTGCAGAC +
Preference number: 4 (lower is better)
Translates to: SFSQAGWLCKTHALSVCIPRNWA*LCWCAD
Trigger: GTCTGCACACCAGCAGAGGCAGGCCCAGTTTCTGGG...GATGCAGACACTCAGGGCGTGTGTCTTGCACAGCCAGCCAGCCTGGGAAAATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520757.1
CDS-3UTR CCA 90 bp GTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGCTCCAGCTCCTGGGTGGGCGGGCTaGAAATGCCTTCCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: VAYGLCTATPIFPVGAPAPGWAG*KCLPWA
Trigger: CGCCCAGGGAAGGCATTTCCAGCCCGCCCACCCAGG...AGCTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS-3UTR CCA 90 bp CTGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCTTGGCTTTCTAGAACAGTCCTaGGTGGGCGGGCTGGAAATG +
Preference number: 4 (lower is better)
Translates to: LGQGCQWQCLCQNLSSLGFLEQS*VGGLEM
Trigger: CATTTCCAGCCCGCCCACCCAGGACTGTTCTAGAAA...GCCAAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS-3UTR CCA 90 bp TGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCTTGGCAGGCAGGGACAGTCTCTaGGTCATCAGTAGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: WARGANGSASARISAVLAGRDSL*VISRRV
Trigger: TACCCTCCTACTGATGACCCAGAGACTGTCCCTGCC...TGCCAAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS-3UTR CCA 90 bp TGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCTTGGCAAACAGTAGCAGTGACTaGGCAGGGACAGTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: WARGANGSASARISAVLANSSSD*AGTVSG
Trigger: CCCAGAGACTGTCCCTGCCCAGTCACTGCTACTGTT...TGCCAAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS-3UTR CCA 90 bp CTGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCTTGGCCCACTGGCTCAAGTGTaGCTTATGGCCTATGCACAG +
Preference number: 4 (lower is better)
Translates to: LGQGCQWQCLCQNLSSLGPLAQV*LMAYAQ
Trigger: CTGTGCATAGGCCATAAGCCACACTTGAGCCAGTGG...GCCAAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CCA 90 bp ACTGTCTGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCCTTCTCCCTGCCCACTaGCTCAAGTGTGGCTTATGG +
Preference number: 4 (lower is better)
Translates to: TVWARGANGSASARISAVLLPAH*LKCGLW
Trigger: CCATAAGCCACACTTGAGCCAGTGGGCAGGGAGAAG...GACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCAGACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR TCA 90 bp GGAGGTGGAGGTTGTAGTGAGCCAAGGTCGTGCCATTGTACTCCAGCCTGGGCGTCAATGGCCACAGGCTaGTGTGGTGGATTGTCACAG +
Preference number: 4 (lower is better)
Translates to: GGGGCSEPRSCHCTPAWASMATG*CGGLSQ
Trigger: CTGTGACAATCCACCACATCAGCCTGTGGCCATTGA...CGCCCAGGCTGGAGTACAATGGCACGACCTTGGCTCACTACAACCTCCACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518608.5
ENST00000520632.5
CDS-3UTR TCA 90 bp CTGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCTTGGCGCCCCTATGATAACTTaGGCCCTTTCCCCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: LGQGCQWQCLCQNLSSLGAPMIT*ALSPFL
Trigger: AAGGAAAGGGGAAAGGGCTCAAGTTATCATAGGGGC...GCCAAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp TCCAGGGACAGCACAGCAGACACTGTCTGGGCCAGGGGTGCCAATGGCAGTGCCACAAGTCCACTGTGGTaGTTCTGGGAAAGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: SRDSTADTVWARGANGSATSPLW*FWESCF
Trigger: GAAGCAACTTTCCCAGAAGCACCACAGTGGACTTGT...GGCACTGCCATTGGCACCCCTGGCCCAGACAGTGTCTGCTGTGCTGTCCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS-3UTR CCA 90 bp CTGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCTTGGCACCAATATTCCCTGTTaGAGCTCCAGCTTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LGQGCQWQCLCQNLSSLGTNIPC*SSSFQG
Trigger: TCCCTGGAAGCTGGAGCTCCAACAGGGAATATTGGT...GCCAAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR TCA 90 bp TCCAGGGACAGCACAGCAGACACTGTCTGGGCCAGGGGTGCCAATGGCAGTGCCCAGTGCATATTTCCCTaGTCTGGCCAATTAGACTTG +
Preference number: 4 (lower is better)
Translates to: SRDSTADTVWARGANGSAQCIFP*SGQLDL
Trigger: CAAGTCTAATTGGCCAGATCAGGGAAATATGCACTG...GGCACTGCCATTGGCACCCCTGGCCCAGACAGTGTCTGCTGTGCTGTCCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS-3UTR TCA 90 bp TCCAGGGACAGCACAGCAGACACTGTCTGGGCCAGGGGTGCCAATGGCAGTGCCTTTCTTCTGCTCCCATaGTATGGTGTTGCTCTCAAG +
Preference number: 4 (lower is better)
Translates to: SRDSTADTVWARGANGSAFLLLP*YGVALK
Trigger: CTTGAGAGCAACACCATATCATGGGAGCAGAAGAAA...GGCACTGCCATTGGCACCCCTGGCCCAGACAGTGTCTGCTGTGCTGTCCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR TCA 90 bp CTCTGCTGGTGTGCAGACCTGAGAAGAGGTGTACCACTGTCAGGTCTGTGGGTGGCTGGTGTGCAGACCTaGGAAGAGGTGTACCACTGT +
Preference number: 4 (lower is better)
Translates to: LCWCADLRRGVPLSGLWVAGVQT*EEVYHC
Trigger: ACAGTGGTACACCTCTTCTCAGGTCTGCACACCAGC...CACCCACAGACCTGACAGTGGTACACCTCTTCTCAGGTCTGCACACCAGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517976.5
ENST00000522683.5
CDS-3UTR GCA 90 bp TCCAGGGACAGCACAGCAGACACTGTCTGGGCCAGGGGTGCCAATGGCAGTGCCGGAACACCTTTCTTCTaGTCCCATGATATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: SRDSTADTVWARGANGSAGTPFF*SHDMVL
Trigger: CAACACCATATCATGGGAGCAGAAGAAAGGTGTTCC...GGCACTGCCATTGGCACCCCTGGCCCAGACAGTGTCTGCTGTGCTGTCCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp TGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCTTGGCACAATGGCAGTGCCTCTaGCAGAATCTCAGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: WARGANGSASARISAVLAQWQCL*QNLSSL
Trigger: AAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTG...TGCCAAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp CACCAATATTCCCTGTTGGAGCTCCAGCTTCCAGGGACAGCACAGCAGACACTGGGGTGCCAATGGCAGTaGCTCTGCCAGAATCTCAGC +
Preference number: 4 (lower is better)
Translates to: HQYSLLELQLPGTAQQTLGCQWQ*LCQNLS
Trigger: GCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCC...CAGTGTCTGCTGTGCTGTCCCTGGAAGCTGGAGCTCCAACAGGGAATATTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp AGCCTGGGCGACAAGAGTGAGACTTCTTTCATCGACGATTTTCATAAGCCATCTCGGGCAGCCGCCGCATaGGCGCGTACAGACCCAGAG +
Preference number: 4 (lower is better)
Translates to: SLGDKSETSFIDDFHKPSRAAAA*ARTDPE
Trigger: CTCTGGGTCTGTACGCGCGCATGCGGCGGCTGCCCG...AGATGGCTTATGAAAATCGTCGATGAAAGAAGTCTCACTCTTGTCGCCCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518608.5
ENST00000520632.5
CDS-3UTR GCA 90 bp GCTGGCTGGCTGTGCAAGACACACGCCCTGAGTGTCTGCATCCTTAATTTCCGTAACTGGGCCTGCCTCTaGTGGTGTGCAGACCTTCCA +
Preference number: 4 (lower is better)
Translates to: AGWLCKTHALSVCILNFRNWACL*WCADLP
Trigger: TGGAAGGTCTGCACACCAGCAGAGGCAGGCCCAGTT...ACGGAAATTAAGGATGCAGACACTCAGGGCGTGTGTCTTGCACAGCCAGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520757.1
CDS-3UTR CCA 90 bp ACTGTCTGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCCCTTCCATAGTTCAATaGCCACAGGCTGATGTGGTG +
Preference number: 4 (lower is better)
Translates to: TVWARGANGSASARISAVPSIVQ*PQADVV
Trigger: CACCACATCAGCCTGTGGCCATTGAACTATGGAAGG...GACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCAGACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CCA 90 bp ACTGTCTGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCCTCAAGTGTGGCTTATaGCCTATGCACAGCTACACC +
Preference number: 4 (lower is better)
Translates to: TVWARGANGSASARISAVLKCGL*PMHSYT
Trigger: GGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAG...GACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCAGACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR TCA 90 bp CTGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCTTGGCTGTTTTCTCAGAGACTaGGTCTTTAACCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: LGQGCQWQCLCQNLSSLGCFLRD*VFNQPE
Trigger: CTCAGGCTGGTTAAAGACTCAGTCTCTGAGAAAACA...GCCAAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396111.6
ENST00000396113.5
CDS-3UTR TCA 90 bp TCCAGGGACAGCACAGCAGACACTGTCTGGGCCAGGGGTGCCAATGGCAGTGCCAGGTGCAAGTGTGCTTaGCTGGCAATGTCATATATT +
Preference number: 4 (lower is better)
Translates to: SRDSTADTVWARGANGSARCKCA*LAMSYI
Trigger: AATATATGACATTGCCAGTCAAGCACACTTGCACCT...GGCACTGCCATTGGCACCCCTGGCCCAGACAGTGTCTGCTGTGCTGTCCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR TCA 90 bp TCCAGGGACAGCACAGCAGACACTGTCTGGGCCAGGGGTGCCAATGGCAGTGCCACAGGAACAGTTTTGTaGAAGGACCTAGCATGCTTT +
Preference number: 4 (lower is better)
Translates to: SRDSTADTVWARGANGSATGTVL*KDLACF
Trigger: AAAGCATGCTAGGTCCTTTCACAAAACTGTTCCTGT...GGCACTGCCATTGGCACCCCTGGCCCAGACAGTGTCTGCTGTGCTGTCCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR TCA 90 bp GCTGGCTGGCTGTGCAAGACACACGCCCTGAGTGTCTGCATCCTTAATTTCCGTTTTACTGGGGCTCTGTaGAGTCAATCTGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: AGWLCKTHALSVCILNFRFTGAL*SQSGAQ
Trigger: CTGGGCCCCAGATTGACTTCACAGAGCCCCAGTAAA...ACGGAAATTAAGGATGCAGACACTCAGGGCGTGTGTCTTGCACAGCCAGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520757.1
CDS-3UTR GCA 90 bp ACTGTCTGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCCACCTAGGTTATAGCTaGTCAGCATGTAAGCCCCTA +
Preference number: 4 (lower is better)
Translates to: TVWARGANGSASARISAVHLGYS*SACKPL
Trigger: TAGGGGCTTACATGCTGAGCAGCTATAACCTAGGTG...GACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCAGACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp TGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCTTGGCAGTCAAATTAAGGCTCTaGTCTTGCCAGCCACTCCAA +
Preference number: 4 (lower is better)
Translates to: WARGANGSASARISAVLAVKLRL*SCQPLQ
Trigger: TTGGAGTGGCTGGCAAGAGCAGAGCCTTAATTTGAC...TGCCAAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp TGCTCTCAAGCAAGTGACAATGCCTTGTGCTTTTCCAATATGACTTGCAGCATGAGCACAGGCCGGGGATaGCAAGCCGCAACGGCCCCC +
Preference number: 4 (lower is better)
Translates to: CSQASDNALCFSNMTCSMSTGRG*QAATAP
Trigger: GGGGGCCGTTGCGGCTTGGCATCCCCGGCCTGTGCT...CATGCTGCAAGTCATATTGGAAAAGCACAAGGCATTGTCACTTGCTTGAGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000517976.5
ENST00000518258.5
ENST00000523337.5
CDS-3UTR GCA 90 bp TGCTCTCAAGCAAGTGACAATGCCTTGTGCTTTTCCAATATGACTTGCAGCATGCGGGCAGCCGCCGCATaGGCGCGTACAGACCCAGAG +
Preference number: 4 (lower is better)
Translates to: CSQASDNALCFSNMTCSMRAAAA*ARTDPE
Trigger: CTCTGGGTCTGTACGCGCGCATGCGGCGGCTGCCCG...CATGCTGCAAGTCATATTGGAAAAGCACAAGGCATTGTCACTTGCTTGAGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
ENST00000523337.5
CDS-3UTR GCA 90 bp CTCTGTGAAGTCAATCTGGGGCCCAGAAACTGGGCCTGCCTCTGCTGGTGTGCACTGCCTCTGCTGGTGTaGAGACCTTCCATAGTTCAA +
Preference number: 4 (lower is better)
Translates to: LCEVNLGPRNWACLCWCALPLLV*RPSIVQ
Trigger: TTGAACTATGGAAGGTCTGCACACCAGCAGAGGCAG...TGCACACCAGCAGAGGCAGGCCCAGTTTCTGGGCCCCAGATTGACTTCACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520632.5
CDS-3UTR GCA 90 bp CTGCTGGTGTGCAGACCTTCCATAGTTCAATGGCCACAGGCTGATGTGGTGGATAACTGGGCCTGCCTCTaGTGGTGTGCAGACCTTCCA +
Preference number: 4 (lower is better)
Translates to: LLVCRPSIVQWPQADVVDNWACL*WCADLP
Trigger: TGGAAGGTCTGCACACCAGCAGAGGCAGGCCCAGTT...ATCCACCACATCAGCCTGTGGCCATTGAACTATGGAAGGTCTGCACACCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520632.5
CDS-3UTR CCA 90 bp CACCAATATTCCCTGTTGGAGCTCCAGCTTCCAGGGACAGCACAGCAGACACTGTTCGTTGAGAGTACATaGGGAGGGGCCTTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: HQYSLLELQLPGTAQQTLFVEST*GGALAG
Trigger: TCCTGCCAAGGCCCCTCCCCATGTACTCTCAACGAA...CAGTGTCTGCTGTGCTGTCCCTGGAAGCTGGAGCTCCAACAGGGAATATTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS-3UTR CCA 90 bp TGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCTTGGCAGGCCACAGGCTGATGTaGTGGATTGTCACAGTATAT +
Preference number: 4 (lower is better)
Translates to: WARGANGSASARISAVLAGHRLM*WIVTVY
Trigger: ATATACTGTGACAATCCACCACATCAGCCTGTGGCC...TGCCAAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CCA 90 bp CACCAATATTCCCTGTTGGAGCTCCAGCTTCCAGGGACAGCACAGCAGACACTGGAATCTCAGCAGTCTTaGCACCCTAGTCCCACGGCA +
Preference number: 4 (lower is better)
Translates to: HQYSLLELQLPGTAQQTLESQQS*HPSPTA
Trigger: TGCCGTGGGACTAGGGTGCCAAGACTGCTGAGATTC...CAGTGTCTGCTGTGCTGTCCCTGGAAGCTGGAGCTCCAACAGGGAATATTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CCA 90 bp CTCTGCTGGTGTGCAGACCTGAGAAGAGGTGTACCACTGTCAGGTCTGTGGGTGTGTCAGGTCTGTGGGTaGCTCCTGTTACAGAAACCC +
Preference number: 4 (lower is better)
Translates to: LCWCADLRRGVPLSGLWVCQVCG*LLLQKP
Trigger: GGGTTTCTGTAACAGGAGCCACCCACAGACCTGACA...CACCCACAGACCTGACAGTGGTACACCTCTTCTCAGGTCTGCACACCAGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517976.5
ENST00000522683.5
CDS-3UTR TCA 90 bp ACTGTCTGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCTTGCTCTCAAGCAAGTaGCAATGCCTTGTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: TVWARGANGSASARISAVLLSSK*QCLVLF
Trigger: GAAAAGCACAAGGCATTGTCACTTGCTTGAGAGCAA...GACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCAGACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp GTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGCTCCAGAGAGCTTCGGGATTCTaGAGGGAGCAGCAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: VWLMAYAQLHQYSLLELQRASGF*REQQGA
Trigger: TGCTCCCTGCTGCTCCCTGCAGAATCCCGAAGCTCT...CTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp TGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCTTGGCAGTGGCTTATGGCCTATaGACAGCTACACCAATATTC +
Preference number: 4 (lower is better)
Translates to: WARGANGSASARISAVLAVAYGL*TATPIF
Trigger: GAATATTGGTGTAGCTGTGCATAGGCCATAAGCCAC...TGCCAAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp AATGGCCACAGGCTGATGTGGTGGATTGTCACAGTATATATCTTCCACAGTTTTCGGGCAGCCGCCGCATaGGCGCGTACAGACCCAGAG +
Preference number: 4 (lower is better)
Translates to: NGHRLMWWIVTVYIFHSFRAAAA*ARTDPE
Trigger: CTCTGGGTCTGTACGCGCGCATGCGGCGGCTGCCCG...AAAACTGTGGAAGATATATACTGTGACAATCCACCACATCAGCCTGTGGCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000518608.5
ENST00000520632.5
ENST00000522683.5
ENST00000523337.5
CDS-3UTR GCA 90 bp CATTTTTATCTTGGTTCCTCCGTAGAAAGTCCTCTTGTGAAACACCATGCAGCACGGGCAGCCGCCGCATaGGCGCGTACAGACCCAGAG +
Preference number: 4 (lower is better)
Translates to: HFYLGSSVESPLVKHHAARAAAA*ARTDPE
Trigger: CTCTGGGTCTGTACGCGCGCATGCGGCGGCTGCCCG...TGCTGCATGGTGTTTCACAAGAGGACTTTCTACGGAGGAACCAAGATAAAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR GCA 90 bp TGTGAAACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTCTGGGCAGTAGTGGTCAGTaGCCCAGGCGCCCGGTCCGC +
Preference number: 4 (lower is better)
Translates to: CETPCSIQISMGRNTFLLGSSGQ*PRRPVR
Trigger: GCGGACCGGGCGCCTGGGGCACTGACCACTACTGCC...CAGAAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGTTTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR CCA 90 bp GTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGCTCCAGCTCCAGTCAGGACTCCATaGCCACCAACCACTCCTCAC +
Preference number: 4 (lower is better)
Translates to: VAYGLCTATPIFPVGAPAPVRTP*PPTTPH
Trigger: GTGAGGAGTGGTTGGTGGCCATGGAGTCCTGACTGG...AGCTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396111.6
ENST00000396113.5
CDS-3UTR CCA 90 bp TGGCTCAAGTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGGGCCAGGGGTGCCAATaGCAGTGCCTCTGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: WLKCGLWPMHSYTNIPCWGQGCQ*QCLCQN
Trigger: ATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCC...CCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CCA 90 bp CTGGCTCAAGTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGACAGCAGACACTGTCTaGGCCAGGGGTGCCAATGGC +
Preference number: 4 (lower is better)
Translates to: LAQVWLMAYAQLHQYSLLTADTV*ARGANG
Trigger: GCCATTGGCACCCCTGGCCCAGACAGTGTCTGCTGT...CAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CCA 90 bp CACCAATATTCCCTGTTGGAGCTCCAGCTTCCAGGGACAGCACAGCAGACACTGCCACTGGCTCAAGTGTaGCTTATGGCCTATGCACAG +
Preference number: 4 (lower is better)
Translates to: HQYSLLELQLPGTAQQTLPLAQV*LMAYAQ
Trigger: CTGTGCATAGGCCATAAGCCACACTTGAGCCAGTGG...CAGTGTCTGCTGTGCTGTCCCTGGAAGCTGGAGCTCCAACAGGGAATATTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR TCA 90 bp TCTGTGAAGTCAATCTGGGGCCCAGAAACTGGGCCTGCCTCTGCTGGTGTGCAGTTGCTCTCAAGCAAGTaGCAATGCCTTGTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: SVKSIWGPETGPASAGVQLLSSK*QCLVLF
Trigger: GAAAAGCACAAGGCATTGTCACTTGCTTGAGAGCAA...CTGCACACCAGCAGAGGCAGGCCCAGTTTCTGGGCCCCAGATTGACTTCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517976.5
CDS-3UTR TCA 90 bp TGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCTTGGCAAGGTGCAAGTGTGCTTaGCTGGCAATGTCATATATT +
Preference number: 4 (lower is better)
Translates to: WARGANGSASARISAVLARCKCA*LAMSYI
Trigger: AATATATGACATTGCCAGTCAAGCACACTTGCACCT...TGCCAAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR TCA 90 bp ACTGTCTGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCACAGGAACAGTTTTGTaGAAGGACCTAGCATGCTTT +
Preference number: 4 (lower is better)
Translates to: TVWARGANGSASARISAVTGTVL*KDLACF
Trigger: AAAGCATGCTAGGTCCTTTCACAAAACTGTTCCTGT...GACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCAGACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp CTGGCTCAAGTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGAGAGCTTCGGGATTCTaGAGGGAGCAGCAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: LAQVWLMAYAQLHQYSLLRASGF*REQQGA
Trigger: TGCTCCCTGCTGCTCCCTGCAGAATCCCGAAGCTCT...CAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp TGGCTCAAGTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGAGCTTCGGGATTCTaGAGGGAGCAGCAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: WLKCGLWPMHSYTNIPCWRASGF*REQQGA
Trigger: TGCTCCCTGCTGCTCCCTGCAGAATCCCGAAGCTCT...CCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp GAGGTGGAGGTTGTAGTGAGCCAAGGTCGTGCCATTGTACTCCAGCCTGGGCGAATTAAAGGCCCTCAGTaGAAAAACAGAGCTTCGGGA +
Preference number: 4 (lower is better)
Translates to: EVEVVVSQGRAIVLQPGRIKGPQ*KNRASG
Trigger: TCCCGAAGCTCTGTTTTTGCACTGAGGGCCTTTAAT...TCGCCCAGGCTGGAGTACAATGGCACGACCTTGGCTCACTACAACCTCCACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520632.5
CDS-3UTR GCA 90 bp CCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATAAATTCCGGGCAGCCGCCGCATaGGCGCGTACAGACCCAGAG +
Preference number: 4 (lower is better)
Translates to: PTATSQFCELLDIPFNKFRAAAA*ARTDPE
Trigger: CTCTGGGTCTGTACGCGCGCATGCGGCGGCTGCCCG...GAATTTATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396124.9
CDS-3UTR GCA 90 bp TCTTTAACTTTTCCATATGTGAAGTTACTTCCAAATATCCTGGTGGTGGGTGGGCGGGCAGCCGCCGCATaGGCGCGTACAGACCCAGAG +
Preference number: 4 (lower is better)
Translates to: SLTFPYVKLLPNILVVGGRAAAA*ARTDPE
Trigger: CTCTGGGTCTGTACGCGCGCATGCGGCGGCTGCCCG...CCCACCCACCACCAGGATATTTGGAAGTAACTTCACATATGGAAAAGTTAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518258.5
ENST00000522683.5
ENST00000523337.5
CDS-3UTR GCA 90 bp GCTTTAGGTGCAAGTGTGCTTGACTGGCAATGTCATATATTACATCTCTCACATGGCAGTAGTGGTCAGTaGCCCAGGCGCCCGGTCCGC +
Preference number: 4 (lower is better)
Translates to: ALGASVLDWQCHILHLSHGSSGQ*PRRPVR
Trigger: GCGGACCGGGCGCCTGGGGCACTGACCACTACTGCC...ATGTGAGAGATGTAATATATGACATTGCCAGTCAAGCACACTTGCACCTAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR GCA 90 bp GCGACAAGAGTGAGACTTCTTTCATCGACGATTTTCATAAGCCATCTTTTAGTCGGCAGTAGTGGTCAGTaGCCCAGGCGCCCGGTCCGC +
Preference number: 4 (lower is better)
Translates to: ATRVRLLSSTIFISHLLVGSSGQ*PRRPVR
Trigger: GCGGACCGGGCGCCTGGGGCACTGACCACTACTGCC...GACTAAAAGATGGCTTATGAAAATCGTCGATGAAAGAAGTCTCACTCTTGTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518608.5
ENST00000520632.5
CDS-3UTR CCA 90 bp CTGGCTCAAGTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGCCAGTCAGGACTCCATaGCCACCAACCACTCCTCAC +
Preference number: 4 (lower is better)
Translates to: LAQVWLMAYAQLHQYSLLPVRTP*PPTTPH
Trigger: GTGAGGAGTGGTTGGTGGCCATGGAGTCCTGACTGG...CAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396111.6
ENST00000396113.5
CDS-3UTR CCA 90 bp ACTGTCTGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCCACAGGCTGATGTGGTaGATTGTCACAGTATATATC +
Preference number: 4 (lower is better)
Translates to: TVWARGANGSASARISAVHRLMW*IVTVYI
Trigger: GATATATACTGTGACAATCCACCACATCAGCCTGTG...GACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCAGACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CCA 90 bp TCCAGGGACAGCACAGCAGACACTGTCTGGGCCAGGGGTGCCAATGGCAGTGCCGCAAGTGTGCTTGACTaGCAATGTCATATATTACAT +
Preference number: 4 (lower is better)
Translates to: SRDSTADTVWARGANGSAASVLD*QCHILH
Trigger: ATGTAATATATGACATTGCCAGTCAAGCACACTTGC...GGCACTGCCATTGGCACCCCTGGCCCAGACAGTGTCTGCTGTGCTGTCCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CCA 90 bp CACCAATATTCCCTGTTGGAGCTCCAGCTTCCAGGGACAGCACAGCAGACACTGACCAATATTCCCTGTTaGAGCTCCAGCTTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: HQYSLLELQLPGTAQQTLTNIPC*SSSFQG
Trigger: TCCCTGGAAGCTGGAGCTCCAACAGGGAATATTGGT...CAGTGTCTGCTGTGCTGTCCCTGGAAGCTGGAGCTCCAACAGGGAATATTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CCA 90 bp CACCAATATTCCCTGTTGGAGCTCCAGCTTCCAGGGACAGCACAGCAGACACTGCTCAAGTGTGGCTTATaGCCTATGCACAGCTACACC +
Preference number: 4 (lower is better)
Translates to: HQYSLLELQLPGTAQQTLLKCGL*PMHSYT
Trigger: GGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAG...CAGTGTCTGCTGTGCTGTCCCTGGAAGCTGGAGCTCCAACAGGGAATATTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CCA 90 bp GTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGCTCCAGCTTCTCCCTGCCCACTaGCTCAAGTGTGGCTTATGG +
Preference number: 4 (lower is better)
Translates to: VWLMAYAQLHQYSLLELQLLPAH*LKCGLW
Trigger: CCATAAGCCACACTTGAGCCAGTGGGCAGGGAGAAG...CTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CCA 90 bp CTGAGAAGAGGTGTACCACTGTCAGGTCTGTGGGTGGCTCCTGTTACAGAAACCTCTGTGAAGTCAATCTaGGGCCCAGAAACTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LRRGVPLSGLWVAPVTETSVKSI*GPETGP
Trigger: AGGCCCAGTTTCTGGGCCCCAGATTGACTTCACAGA...GGTTTCTGTAACAGGAGCCACCCACAGACCTGACAGTGGTACACCTCTTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517976.5
3UTR CAA 72 bp CTTATGGCCTATGCACAGCTACACCAATATTCCCTGTaGGAGCTCCAGCTTCCAGGGACAGCACAGCAGACA +
Preference number: 4 (lower is better)
Translates to: LMAYAQLHQYSL*ELQLPGTAQQT
Trigger: TGTCTGCTGTGCTGTCCCTGGAAGCTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR TCA 90 bp CTGGCTCAAGTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGCCCTTTCATCACCAGTaGCTGGTCCAGGACAGTGCA +
Preference number: 4 (lower is better)
Translates to: LAQVWLMAYAQLHQYSLLPFHHQ*LVQDSA
Trigger: TGCACTGTCCTGGACCAGTCACTGGTGATGAAAGGG...CAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS-3UTR TCA 90 bp GTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGCTCCAGCTTCAATGGCCACAGGCTaGTGTGGTGGATTGTCACAG +
Preference number: 4 (lower is better)
Translates to: VAYGLCTATPIFPVGAPASMATG*CGGLSQ
Trigger: CTGTGACAATCCACCACATCAGCCTGTGGCCATTGA...AGCTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR TCA 90 bp GTACCACTGTCAGGTCTGTGGGTGGCTCCTGTTACAGAAACCCTCTTTTGGCAATCAATGGCCACAGGCTaGTGTGGTGGATTGTCACAG +
Preference number: 4 (lower is better)
Translates to: VPLSGLWVAPVTETLFWQSMATG*CGGLSQ
Trigger: CTGTGACAATCCACCACATCAGCCTGTGGCCATTGA...TTGCCAAAAGAGGGTTTCTGTAACAGGAGCCACCCACAGACCTGACAGTGGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517976.5
ENST00000522683.5
CDS-3UTR TCA 90 bp CTGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCTTGGCTCAAAATCCACTCGCTaGATTTTCTTTAGAAAGTCC +
Preference number: 4 (lower is better)
Translates to: LGQGCQWQCLCQNLSSLGSKSTR*IFFRKS
Trigger: GGACTTTCTAAAGAAAATTCAGCGAGTGGATTTTGA...GCCAAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR TCA 90 bp ACTGTCTGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCAAAGCCCACAACACGTaGCTGATATTCCTCAAATAT +
Preference number: 4 (lower is better)
Translates to: TVWARGANGSASARISAVKAHNT*LIFLKY
Trigger: ATATTTGAGGAATATCAGTCACGTGTTGTGGGCTTT...GACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCAGACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR TCA 90 bp TGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCTTGGCAAAAGCCCACAACACGTaGCTGATATTCCTCAAATAT +
Preference number: 4 (lower is better)
Translates to: WARGANGSASARISAVLAKAHNT*LIFLKY
Trigger: ATATTTGAGGAATATCAGTCACGTGTTGTGGGCTTT...TGCCAAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp TCCAGGGACAGCACAGCAGACACTGTCTGGGCCAGGGGTGCCAATGGCAGTGCCAGTAATGTATTCTTCTaGTGTAAAGATGGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: SRDSTADTVWARGANGSASNVFF*CKDGWN
Trigger: ATTCCACCCATCTTTACAGCAGAAGAATACATTACT...GGCACTGCCATTGGCACCCCTGGCCCAGACAGTGTCTGCTGTGCTGTCCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp CCTAGTCCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATTGTCTGGGCCAGGGGTaGCAATGGCAGTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: PSPTATSQFCELLDIPFNCLGQG*QWQCLC
Trigger: GCAGAGGCACTGCCATTGGCACCCCTGGCCCAGACA...ATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGGACTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp CACCAATATTCCCTGTTGGAGCTCCAGCTTCCAGGGACAGCACAGCAGACACTGCACCTAGGTTATAGCTaGTCAGCATGTAAGCCCCTA +
Preference number: 4 (lower is better)
Translates to: HQYSLLELQLPGTAQQTLHLGYS*SACKPL
Trigger: TAGGGGCTTACATGCTGAGCAGCTATAACCTAGGTG...CAGTGTCTGCTGTGCTGTCCCTGGAAGCTGGAGCTCCAACAGGGAATATTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp TGCATTCGCATCAGTCCAATTGTTTTCTCAGAGACTGAGTCTTTAACTTTTCCAAGCACAGGCCGGGGATaGCAAGCCGCAACGGCCCCC +
Preference number: 4 (lower is better)
Translates to: CIRISPIVFSETESLTFPSTGRG*QAATAP
Trigger: GGGGGCCGTTGCGGCTTGGCATCCCCGGCCTGTGCT...TGGAAAAGTTAAAGACTCAGTCTCTGAGAAAACAATTGGACTGATGCGAATGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518258.5
ENST00000523337.5
CDS-3UTR GCA 90 bp AATCCACTCGCTGAATTTTCTTTAGAAAGTCCTCTAGAGAAACCGTCTGAAGAACGGGCAGCCGCCGCATaGGCGCGTACAGACCCAGAG +
Preference number: 4 (lower is better)
Translates to: NPLAEFSLESPLEKPSEERAAAA*ARTDPE
Trigger: CTCTGGGTCTGTACGCGCGCATGCGGCGGCTGCCCG...TTCTTCAGACGGTTTCTCTAGAGGACTTTCTAAAGAAAATTCAGCGAGTGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
CDS-3UTR CCA 90 bp CCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATAAATTCTGGAAATGCCTTCCCTaGGCGCGCCGCGCAAGGCCG +
Preference number: 4 (lower is better)
Translates to: PTATSQFCELLDIPFNKFWKCLP*ARRARP
Trigger: CGGCCTTGCGCGGCGCGCCCAGGGAAGGCATTTCCA...GAATTTATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS-3UTR CCA 90 bp GTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGCTCCAGCTCACCATCTGTTGTGCTaGACTCCTGCTGACTCCAGT +
Preference number: 4 (lower is better)
Translates to: VAYGLCTATPIFPVGAPAHHLLC*TPADSS
Trigger: ACTGGAGTCAGCAGGAGTCCAGCACAACAGATGGTG...AGCTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396111.6
ENST00000396113.5
CDS-3UTR CCA 90 bp CTGGCTCAAGTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGTGGGTTGTTGAGAGGTaGCTGCCTCTGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: LAQVWLMAYAQLHQYSLLWVVER*LPLPPK
Trigger: TTTGGGAGGCAGAGGCAGCCACCTCTCAACAACCCA...CAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS-3UTR CCA 90 bp ACTGTCTGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCCTCACATTTTTATCTTaGTTCCTCCGTAGAAAGTCC +
Preference number: 4 (lower is better)
Translates to: TVWARGANGSASARISAVLTFLS*FLRRKS
Trigger: GGACTTTCTACGGAGGAACCAAGATAAAAATGTGAG...GACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCAGACAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CCA 90 bp TGGCTCAAGTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGCTTCTCCCTGCCCACTaGCTCAAGTGTGGCTTATGG +
Preference number: 4 (lower is better)
Translates to: WLKCGLWPMHSYTNIPCWLLPAH*LKCGLW
Trigger: CCATAAGCCACACTTGAGCCAGTGGGCAGGGAGAAG...CCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR TCA 90 bp CTGGCTCAAGTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGTCAATGGCCACAGGCTaGTGTGGTGGATTGTCACAG +
Preference number: 4 (lower is better)
Translates to: LAQVWLMAYAQLHQYSLLSMATG*CGGLSQ
Trigger: CTGTGACAATCCACCACATCAGCCTGTGGCCATTGA...CAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR TCA 90 bp TGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCTTGGCACCCACAACACGTGACTaGTATTCCTCAAATATTAAT +
Preference number: 4 (lower is better)
Translates to: WARGANGSASARISAVLAPTTRD*YSSNIN
Trigger: ATTAATATTTGAGGAATATCAGTCACGTGTTGTGGG...TGCCAAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp TCTGTGGGTGGCTCCTGTTACAGAAACCCTCTTTTGGCAATCACTTCCATAGTTAGAGCTTCGGGATTCTaGAGGGAGCAGCAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: SVGGSCYRNPLLAITSIVRASGF*REQQGA
Trigger: TGCTCCCTGCTGCTCCCTGCAGAATCCCGAAGCTCT...AACTATGGAAGTGATTGCCAAAAGAGGGTTTCTGTAACAGGAGCCACCCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517976.5
ENST00000522683.5
CDS-3UTR GCA 90 bp CACCAATATTCCCTGTTGGAGCTCCAGCTTCCAGGGACAGCACAGCAGACACTGATTAAAGGCCCTCAGTaGAAAAACAGAGCTTCGGGA +
Preference number: 4 (lower is better)
Translates to: HQYSLLELQLPGTAQQTLIKGPQ*KNRASG
Trigger: TCCCGAAGCTCTGTTTTTGCACTGAGGGCCTTTAAT...CAGTGTCTGCTGTGCTGTCCCTGGAAGCTGGAGCTCCAACAGGGAATATTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp ACTGTCTGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCTTTTCCAATATGACTTaGAGCATGATCTGCATGAAG +
Preference number: 4 (lower is better)
Translates to: TVWARGANGSASARISAVFSNMT*SMICMK
Trigger: CTTCATGCAGATCATGCTGCAAGTCATATTGGAAAA...GACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCAGACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp ACTGTCTGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCTCTTGTGAAACACCATaGAGCATACAAATATCCATG +
Preference number: 4 (lower is better)
Translates to: TVWARGANGSASARISAVSCETP*SIQISM
Trigger: CATGGATATTTGTATGCTGCATGGTGTTTCACAAGA...GACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCAGACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CCA 90 bp CTGGCTCAAGTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGCACCATCTGTTGTGCTaGACTCCTGCTGACTCCAGT +
Preference number: 4 (lower is better)
Translates to: LAQVWLMAYAQLHQYSLLHHLLC*TPADSS
Trigger: ACTGGAGTCAGCAGGAGTCCAGCACAACAGATGGTG...CAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396111.6
ENST00000396113.5
CDS-3UTR CCA 90 bp AGAAGAGGTGTACCACTGTCAGGTCTGTGGGTGGCTCCTGTTACAGAAACCCTCGGCCACAGGCTGATGTaGTGGATTGTCACAGTATAT +
Preference number: 4 (lower is better)
Translates to: RRGVPLSGLWVAPVTETLGHRLM*WIVTVY
Trigger: ATATACTGTGACAATCCACCACATCAGCCTGTGGCC...GAGGGTTTCTGTAACAGGAGCCACCCACAGACCTGACAGTGGTACACCTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517976.5
ENST00000522683.5
CDS-3UTR CCA 90 bp GTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGCTCCAGCCTTCCATAGTTCAATaGCCACAGGCTGATGTGGTG +
Preference number: 4 (lower is better)
Translates to: VWLMAYAQLHQYSLLELQPSIVQ*PQADVV
Trigger: CACCACATCAGCCTGTGGCCATTGAACTATGGAAGG...CTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CCA 90 bp CACCAATATTCCCTGTTGGAGCTCCAGCTTCCAGGGACAGCACAGCAGACACTGTCTGCTCCCATGATATaGTGTTGCTCTCAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: HQYSLLELQLPGTAQQTLSAPMI*CCSQAS
Trigger: ACTTGCTTGAGAGCAACACCATATCATGGGAGCAGA...CAGTGTCTGCTGTGCTGTCCCTGGAAGCTGGAGCTCCAACAGGGAATATTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CCA 90 bp TGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCTTGGCAGCAAGTGTGCTTGACTaGCAATGTCATATATTACAT +
Preference number: 4 (lower is better)
Translates to: WARGANGSASARISAVLAASVLD*QCHILH
Trigger: ATGTAATATATGACATTGCCAGTCAAGCACACTTGC...TGCCAAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CCA 90 bp CCTAGTCCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATGGCCAGGGGTGCCAATaGCAGTGCCTCTGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: PSPTATSQFCELLDIPFNGQGCQ*QCLCQN
Trigger: ATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCC...ATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGGACTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CCA 90 bp GTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGCTCCAGCTACCAATATTCCCTGTTaGAGCTCCAGCTTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: VAYGLCTATPIFPVGAPATNIPC*SSSFQG
Trigger: TCCCTGGAAGCTGGAGCTCCAACAGGGAATATTGGT...AGCTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CCA 90 bp TGGCTCAAGTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGCCACTGGCTCAAGTGTaGCTTATGGCCTATGCACAG +
Preference number: 4 (lower is better)
Translates to: WLKCGLWPMHSYTNIPCWPLAQV*LMAYAQ
Trigger: CTGTGCATAGGCCATAAGCCACACTTGAGCCAGTGG...CCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CCA 90 bp CCTCTGCTGGTGTGCAGACCTGAGAAGAGGTGTACCACTGTCAGGTCTGTGGGTTACTTCCAAATATCCTaGTGGTGGGTGGGTTTCTTA +
Preference number: 4 (lower is better)
Translates to: PLLVCRPEKRCTTVRSVGYFQIS*WWVGFL
Trigger: TAAGAAACCCACCCACCACCAGGATATTTGGAAGTA...ACCCACAGACCTGACAGTGGTACACCTCTTCTCAGGTCTGCACACCAGCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522683.5
CDS-3UTR CCA 90 bp ACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTCTGCTCCCATTTTCCCAGGCTGGCTaGCTGTGCAAGACACACGCC +
Preference number: 4 (lower is better)
Translates to: TPCSIQISMGRNTFLLLPFSQAG*LCKTHA
Trigger: GGCGTGTGTCTTGCACAGCCAGCCAGCCTGGGAAAA...TGGGAGCAGAAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520757.1
CDS-3UTR TCA 90 bp AGAAGAGGTGTACCACTGTCAGGTCTGTGGGTGGCTCCTGTTACAGAAACCCTCAAGAGTAATCCAGCCTaGGCCAGTTCCACATTAAAG +
Preference number: 4 (lower is better)
Translates to: RRGVPLSGLWVAPVTETLKSNPA*ASSTLK
Trigger: CTTTAATGTGGAACTGGCTCAGGCTGGATTACTCTT...GAGGGTTTCTGTAACAGGAGCCACCCACAGACCTGACAGTGGTACACCTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522683.5
CDS-3UTR GCA 90 bp TGCTCTCAAGCAAGTGACAATGCCTTGTGCTTTTCCAATATGACTTGCAGCATGAGAGCTTCGGGATTCTaGAGGGAGCAGCAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: CSQASDNALCFSNMTCSMRASGF*REQQGA
Trigger: TGCTCCCTGCTGCTCCCTGCAGAATCCCGAAGCTCT...CATGCTGCAAGTCATATTGGAAAAGCACAAGGCATTGTCACTTGCTTGAGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
ENST00000523337.5
CDS-3UTR GCA 90 bp CAATGGCCACAGGCTGATGTGGTGGATTGTCACAGTATATATCTTCCACAGTTTAGAGCTTCGGGATTCTaGAGGGAGCAGCAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: QWPQADVVDCHSIYLPQFRASGF*REQQGA
Trigger: TGCTCCCTGCTGCTCCCTGCAGAATCCCGAAGCTCT...AAACTGTGGAAGATATATACTGTGACAATCCACCACATCAGCCTGTGGCCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520632.5
ENST00000522683.5
ENST00000523337.5
CDS-3UTR GCA 90 bp CTGGTGTGCAGACCTGAGAAGAGGTGTACCACTGTCAGGTCTGTGGGTGGCTCCTTTTCCAATATGACTTaGAGCATGATCTGCATGAAG +
Preference number: 4 (lower is better)
Translates to: LVCRPEKRCTTVRSVGGSFSNMT*SMICMK
Trigger: CTTCATGCAGATCATGCTGCAAGTCATATTGGAAAA...GGAGCCACCCACAGACCTGACAGTGGTACACCTCTTCTCAGGTCTGCACACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517976.5
CDS-3UTR GCA 90 bp CACCAATATTCCCTGTTGGAGCTCCAGCTTCCAGGGACAGCACAGCAGACACTGCCCATGATATGGTGTTaGTCTCAAGCAAGTGACAAT +
Preference number: 4 (lower is better)
Translates to: HQYSLLELQLPGTAQQTLPMIWC*SQASDN
Trigger: ATTGTCACTTGCTTGAGAGCAACACCATATCATGGG...CAGTGTCTGCTGTGCTGTCCCTGGAAGCTGGAGCTCCAACAGGGAATATTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp TGGCTCAAGTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGCAATGGCAGTGCCTCTaGCAGAATCTCAGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: WLKCGLWPMHSYTNIPCWQWQCL*QNLSSL
Trigger: AAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTG...CCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp GTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGCTCCAGCACCTAGGTTATAGCTaGTCAGCATGTAAGCCCCTA +
Preference number: 4 (lower is better)
Translates to: VWLMAYAQLHQYSLLELQHLGYS*SACKPL
Trigger: TAGGGGCTTACATGCTGAGCAGCTATAACCTAGGTG...CTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp CAATATGACTTGCAGCATGATCTGCATGAAGATCCTTTATACCCAATATTTCTACCCCAGACAGAGCCGTaGGCGGAGGCCGCCATGACG +
Preference number: 4 (lower is better)
Translates to: QYDLQHDLHEDPLYPIFLPQTEP*AEAAMT
Trigger: CGTCATGGCGGCCTCCGCGCACGGCTCTGTCTGGGG...TAGAAATATTGGGTATAAAGGATCTTCATGCAGATCATGCTGCAAGTCATATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518258.5
CDS-3UTR GCA 90 bp ATCAGTCCAATTGTTTTCTCAGAGACTGAGTCTTTAACTTTTCCATATGTGAAGCGGGCAGCCGCCGCATaGGCGCGTACAGACCCAGAG +
Preference number: 4 (lower is better)
Translates to: ISPIVFSETESLTFPYVKRAAAA*ARTDPE
Trigger: CTCTGGGTCTGTACGCGCGCATGCGGCGGCTGCCCG...CTTCACATATGGAAAAGTTAAAGACTCAGTCTCTGAGAAAACAATTGGACTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518258.5
ENST00000522683.5
ENST00000523337.5
CDS-3UTR GCA 90 bp CAATATGACTTGCAGCATGATCTGCATGAAGATCCTTTATACCCAATATTTCTAGGCAGTAGTGGTCAGTaGCCCAGGCGCCCGGTCCGC +
Preference number: 4 (lower is better)
Translates to: QYDLQHDLHEDPLYPIFLGSSGQ*PRRPVR
Trigger: GCGGACCGGGCGCCTGGGGCACTGACCACTACTGCC...TAGAAATATTGGGTATAAAGGATCTTCATGCAGATCATGCTGCAAGTCATATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520632.5
ENST00000520757.1
ENST00000523337.5
CDS-3UTR GCA 90 bp GTTTTCAGCATAATTTTCCAGTTCCTTGATATTACGATATGCTTTGTCATCCAGGGCAGTAGTGGTCAGTaGCCCAGGCGCCCGGTCCGC +
Preference number: 4 (lower is better)
Translates to: VFSIIFQFLDITICFVIQGSSGQ*PRRPVR
Trigger: GCGGACCGGGCGCCTGGGGCACTGACCACTACTGCC...CTGGATGACAAAGCATATCGTAATATCAAGGAACTGGAAAATTATGCTGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000518608.5
ENST00000520632.5
ENST00000520757.1
ENST00000523337.5
CDS-3UTR GCA 90 bp TCCAAGCTCAAGTACCTGGAGAAGTGCGCATGCCTAGAACCAGAGTCCTTCAAAAAGTACCTGGAGAAGTaGGCATGCCTAGAACCAGAG +
Preference number: 4 (lower is better)
Translates to: SKLKYLEKCACLEPESFKKYLEK*ACLEPE
Trigger: CTCTGGTTCTAGGCATGCGCACTTCTCCAGGTACTT...TTTGAAGGACTCTGGTTCTAGGCATGCGCACTTCTCCAGGTACTTGAGCTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520757.1
CDS-3UTR CCA 90 bp GTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGCTCCAGCCACTGTGGTGCTTCTaGGAAAGTTGCTTCACTTTG +
Preference number: 4 (lower is better)
Translates to: VWLMAYAQLHQYSLLELQPLWCF*ESCFTL
Trigger: CAAAGTGAAGCAACTTTCCCAGAAGCACCACAGTGG...CTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS-3UTR CCA 90 bp AACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTCTGCTCCCACCCCACCAGCCTTCTaGGAGATTCCAGCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: NTMQHTNIHGKEHLSSAPTPPAF*EIPAKW
Trigger: CCACTTTGCTGGAATCTCCCAGAAGGCTGGTGGGGT...GGGAGCAGAAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520757.1
CDS-3UTR TCA 90 bp AGCCTGGGCGACAAGAGTGAGACTTCTTTCATCGACGATTTTCATAAGCCATCTTCAATGGCCACAGGCTaGTGTGGTGGATTGTCACAG +
Preference number: 4 (lower is better)
Translates to: SLGDKSETSFIDDFHKPSSMATG*CGGLSQ
Trigger: CTGTGACAATCCACCACATCAGCCTGTGGCCATTGA...AGATGGCTTATGAAAATCGTCGATGAAAGAAGTCTCACTCTTGTCGCCCAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518608.5
ENST00000520632.5
CDS-3UTR TCA 90 bp GTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGCTCCAGCTTTTCTTCTGCTCCCATaGTATGGTGTTGCTCTCAAG +
Preference number: 4 (lower is better)
Translates to: VAYGLCTATPIFPVGAPAFLLLP*YGVALK
Trigger: CTTGAGAGCAACACCATATCATGGGAGCAGAAGAAA...AGCTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp CCTAGTCCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATGACCACCATCTGTTGTaGTGGACTCCTGCTGACTCC +
Preference number: 4 (lower is better)
Translates to: PSPTATSQFCELLDIPFNDHHLL*WTPADS
Trigger: GGAGTCAGCAGGAGTCCAGCACAACAGATGGTGGTC...ATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGGACTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396111.6
ENST00000396113.5
CDS-3UTR GCA 90 bp GTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGCTCCAGCTATTAAAGGCCCTCAGTaGAAAAACAGAGCTTCGGGA +
Preference number: 4 (lower is better)
Translates to: VAYGLCTATPIFPVGAPAIKGPQ*KNRASG
Trigger: TCCCGAAGCTCTGTTTTTGCACTGAGGGCCTTTAAT...AGCTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp GTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGCTCCAGGGAACACCTTTCTTCTaGTCCCATGATATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: VWLMAYAQLHQYSLLELQGTPFF*SHDMVL
Trigger: CAACACCATATCATGGGAGCAGAAGAAAGGTGTTCC...CTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp CTGGCTCAAGTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGTCAAATTAAGGCTCTaGTCTTGCCAGCCACTCCAA +
Preference number: 4 (lower is better)
Translates to: LAQVWLMAYAQLHQYSLLVKLRL*SCQPLQ
Trigger: TTGGAGTGGCTGGCAAGAGCAGAGCCTTAATTTGAC...CAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp ATGATATGGTGTTGCTCTCAAGCAAGTGACAATGCCTTGTGCTTTTCCAATATGCCCAGAAACTGGGCCTaGCTCTGCTGGTGTGCAGAC +
Preference number: 4 (lower is better)
Translates to: MIWCCSQASDNALCFSNMPRNWA*LCWCAD
Trigger: GTCTGCACACCAGCAGAGGCAGGCCCAGTTTCTGGG...CATATTGGAAAAGCACAAGGCATTGTCACTTGCTTGAGAGCAACACCATATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517976.5
ENST00000520757.1
CDS-3UTR GCA 90 bp ATGATATGGTGTTGCTCTCAAGCAAGTGACAATGCCTTGTGCTTTTCCAATATGCAGGCTGGCTGGCTGTaGAAGACACACGCCCTGAGT +
Preference number: 4 (lower is better)
Translates to: MIWCCSQASDNALCFSNMQAGWL*KTHALS
Trigger: ACTCAGGGCGTGTGTCTTGCACAGCCAGCCAGCCTG...CATATTGGAAAAGCACAAGGCATTGTCACTTGCTTGAGAGCAACACCATATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520757.1
CDS-3UTR CCA 90 bp CTGAGAAGAGGTGTACCACTGTCAGGTCTGTGGGTGGCTCCTGTTACAGAAACCCACAGGCTGATGTGGTaGATTGTCACAGTATATATC +
Preference number: 4 (lower is better)
Translates to: LRRGVPLSGLWVAPVTETHRLMW*IVTVYI
Trigger: GATATATACTGTGACAATCCACCACATCAGCCTGTG...GGTTTCTGTAACAGGAGCCACCCACAGACCTGACAGTGGTACACCTCTTCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517976.5
ENST00000522683.5
CDS-3UTR CCA 90 bp TGGCTCAAGTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGGGCCACAGGCTGATGTaGTGGATTGTCACAGTATAT +
Preference number: 4 (lower is better)
Translates to: WLKCGLWPMHSYTNIPCWGHRLM*WIVTVY
Trigger: ATATACTGTGACAATCCACCACATCAGCCTGTGGCC...CCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CCA 90 bp AGTCCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATAAAACAGCAGACACTGTCTaGGCCAGGGGTGCCAATGGC +
Preference number: 4 (lower is better)
Translates to: SPTATSQFCELLDIPFNKTADTV*ARGANG
Trigger: GCCATTGGCACCCCTGGCCCAGACAGTGTCTGCTGT...TTTATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CCA 90 bp TCCATAGTTCAATGGCCACAGGCTGATGTGGTGGATTGTCACAGTATATATCTTTGGGCCTGCCTCTGCTaGTGTGCAGACCTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: SIVQWPQADVVDCHSIYLWACLC*CADLRR
Trigger: TCTTCTCAGGTCTGCACACCAGCAGAGGCAGGCCCA...AAGATATATACTGTGACAATCCACCACATCAGCCTGTGGCCATTGAACTATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517976.5
ENST00000522683.5
CDS-3UTR TCA 90 bp CCTAGTCCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATTCAATGGCCACAGGCTaGTGTGGTGGATTGTCACAG +
Preference number: 4 (lower is better)
Translates to: PSPTATSQFCELLDIPFNSMATG*CGGLSQ
Trigger: CTGTGACAATCCACCACATCAGCCTGTGGCCATTGA...ATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGGACTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR TCA 90 bp AAACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTCTGCTCCTCAATGGCCACAGGCTaGTGTGGTGGATTGTCACAG +
Preference number: 4 (lower is better)
Translates to: KHHAAYKYPWEGTPFFCSSMATG*CGGLSQ
Trigger: CTGTGACAATCCACCACATCAGCCTGTGGCCATTGA...GGAGCAGAAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR TCA 90 bp TGGCTCAAGTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGTTGCTCTCAAGCAAGTaGCAATGCCTTGTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: WLKCGLWPMHSYTNIPCWLLSSK*QCLVLF
Trigger: GAAAAGCACAAGGCATTGTCACTTGCTTGAGAGCAA...CCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR TCA 90 bp GTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGCTCCAGCTAGGTGCAAGTGTGCTTaGCTGGCAATGTCATATATT +
Preference number: 4 (lower is better)
Translates to: VAYGLCTATPIFPVGAPARCKCA*LAMSYI
Trigger: AATATATGACATTGCCAGTCAAGCACACTTGCACCT...AGCTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR TCA 90 bp ACCACTGTCAGGTCTGTGGGTGGCTCCTGTTACAGAAACCCTCTTTTGGCAATCAGGTGCAAGTGTGCTTaGCTGGCAATGTCATATATT +
Preference number: 4 (lower is better)
Translates to: TTVRSVGGSCYRNPLLAIRCKCA*LAMSYI
Trigger: AATATATGACATTGCCAGTCAAGCACACTTGCACCT...GATTGCCAAAAGAGGGTTTCTGTAACAGGAGCCACCCACAGACCTGACAGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517976.5
CDS-3UTR TCA 90 bp GTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGCTCCAGCTACAGGAACAGTTTTGTaGAAGGACCTAGCATGCTTT +
Preference number: 4 (lower is better)
Translates to: VAYGLCTATPIFPVGAPATGTVL*KDLACF
Trigger: AAAGCATGCTAGGTCCTTTCACAAAACTGTTCCTGT...AGCTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR TCA 90 bp GTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGCTCCAGCTTCTAGAGAAACCGTCTaGAGAAAAGCAGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: VAYGLCTATPIFPVGAPASRETV*RKAGNA
Trigger: AGCATTTCCTGCTTTTCTTCAGACGGTTTCTCTAGA...AGCTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR TCA 90 bp GTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGCTCCAGTCTAGAGAAACCGTCTaGAGAAAAGCAGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: VWLMAYAQLHQYSLLELQSRETV*RKAGNA
Trigger: AGCATTTCCTGCTTTTCTTCAGACGGTTTCTCTAGA...CTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR TCA 90 bp GTACCACTGTCAGGTCTGTGGGTGGCTCCTGTTACAGAAACCCTCTTTTGGCAATCTAGAGAAACCGTCTaGAGAAAAGCAGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: VPLSGLWVAPVTETLFWQSRETV*RKAGNA
Trigger: AGCATTTCCTGCTTTTCTTCAGACGGTTTCTCTAGA...TTGCCAAAAGAGGGTTTCTGTAACAGGAGCCACCCACAGACCTGACAGTGGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517976.5
CDS-3UTR TCA 90 bp TGGCTCAAGTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGCATGATAATGCTGAATaGCAGAGTGAGGAAGTGGGA +
Preference number: 4 (lower is better)
Translates to: WLKCGLWPMHSYTNIPCWHDNAE*QSEEVG
Trigger: TCCCACTTCCTCACTCTGTCATTCAGCATTATCATG...CCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR TCA 90 bp CAATGGCCACAGGCTGATGTGGTGGATTGTCACAGTATATATCTTCCACAGTTTCCTGGGCGACAAGAGTaGGACTTCTTTCATCGACGA +
Preference number: 4 (lower is better)
Translates to: QWPQADVVDCHSIYLPQFPGRQE*DFFHRR
Trigger: TCGTCGATGAAAGAAGTCTCACTCTTGTCGCCCAGG...AAACTGTGGAAGATATATACTGTGACAATCCACCACATCAGCCTGTGGCCATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518608.5
ENST00000520632.5
CDS-3UTR TCA 90 bp TGTGAAACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTCTGGCTGGTGTGCAGACCTaGGAAGAGGTGTACCACTGT +
Preference number: 4 (lower is better)
Translates to: CETPCSIQISMGRNTFLLAGVQT*EEVYHC
Trigger: ACAGTGGTACACCTCTTCTCAGGTCTGCACACCAGC...CAGAAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGTTTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517976.5
CDS-3UTR TCA 90 bp TCCATAGTTCAATGGCCACAGGCTGATGTGGTGGATTGTCACAGTATATATCTTTTTACTGGGGCTCTGTaGAGTCAATCTGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: SIVQWPQADVVDCHSIYLFTGAL*SQSGAQ
Trigger: CTGGGCCCCAGATTGACTTCACAGAGCCCCAGTAAA...AAGATATATACTGTGACAATCCACCACATCAGCCTGTGGCCATTGAACTATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517976.5
ENST00000520632.5
CDS-3UTR TCA 90 bp TCCATAGTTCAATGGCCACAGGCTGATGTGGTGGATTGTCACAGTATATATCTTGGGCGATTCCAAAGGTaGGGCAGGGGAGAGATTCAA +
Preference number: 4 (lower is better)
Translates to: SIVQWPQADVVDCHSIYLGRFQR*GRGEIQ
Trigger: TTGAATCTCTCCCCTGCCTCACCTTTGGAATCGCCC...AAGATATATACTGTGACAATCCACCACATCAGCCTGTGGCCATTGAACTATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518258.5
CDS-3UTR GCA 90 bp GTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGCTCCAGCTCCCATGATATGGTGTTaGTCTCAAGCAAGTGACAAT +
Preference number: 4 (lower is better)
Translates to: VAYGLCTATPIFPVGAPAPMIWC*SQASDN
Trigger: ATTGTCACTTGCTTGAGAGCAACACCATATCATGGG...AGCTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp CTGGCTCAAGTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGGAACACCTTTCTTCTaGTCCCATGATATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: LAQVWLMAYAQLHQYSLLGTPFF*SHDMVL
Trigger: CAACACCATATCATGGGAGCAGAAGAAAGGTGTTCC...CAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp ACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTCTGCTCCCACACGCCCTGAGTGTCTaGATCCTTAATTTCCGTCTG +
Preference number: 4 (lower is better)
Translates to: TPCSIQISMGRNTFLLLPHALSV*ILNFRL
Trigger: CAGACGGAAATTAAGGATGCAGACACTCAGGGCGTG...TGGGAGCAGAAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520757.1
CDS-3UTR GCA 90 bp AAACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTCTGCTCCCTGGAGAAGTGCGCATaGCTAGAACCAGAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: KHHAAYKYPWEGTPFFCSLEKCA*LEPESF
Trigger: GAAGGACTCTGGTTCTAGGCATGCGCACTTCTCCAG...GGAGCAGAAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520757.1
CDS-3UTR CCA 90 bp AGTCCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATAAACATGGGGAGGGGCCTTaGCAGGAGCAGTTCAGTAGA +
Preference number: 4 (lower is better)
Translates to: SPTATSQFCELLDIPFNKHGEGP*QEQFSR
Trigger: TCTACTGAACTGCTCCTGCCAAGGCCCCTCCCCATG...TTTATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS-3UTR CCA 90 bp CTGGCTCAAGTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGTCTGCTCCCATGATATaGTGTTGCTCTCAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: LAQVWLMAYAQLHQYSLLSAPMI*CCSQAS
Trigger: ACTTGCTTGAGAGCAACACCATATCATGGGAGCAGA...CAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CCA 90 bp CAGGTCTGTGGGTGGCTCCTGTTACAGAAACCCTCTTTTGGCAATCACTTCCATGCTTTCCATCTTTACTaGGGCTCTGTGAAGTCAATC +
Preference number: 4 (lower is better)
Translates to: QVCGWLLLQKPSFGNHFHAFHLY*GSVKSI
Trigger: GATTGACTTCACAGAGCCCCAGTAAAGATGGAAAGC...ATGGAAGTGATTGCCAAAAGAGGGTTTCTGTAACAGGAGCCACCCACAGACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517976.5
CDS-3UTR TCA 90 bp GTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGCTCCAGCTATGTGCAGCCAAAGTTaGTTTCTTGTGCTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: VAYGLCTATPIFPVGAPAMCSQS*FLVLRK
Trigger: TTTTCTGAGCACAAGAAATCAACTTTGGCTGCACAT...AGCTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS-3UTR TCA 90 bp GTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGCTCCAGAAAGCCCACAACACGTaGCTGATATTCCTCAAATAT +
Preference number: 4 (lower is better)
Translates to: VWLMAYAQLHQYSLLELQKAHNT*LIFLKY
Trigger: ATATTTGAGGAATATCAGTCACGTGTTGTGGGCTTT...CTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR TCA 90 bp CATGCTTTAGGTGCAAGTGTGCTTGACTGGCAATGTCATATATTACATCTCTCATTTACTGGGGCTCTGTaGAGTCAATCTGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: HALGASVLDWQCHILHLSFTGAL*SQSGAQ
Trigger: CTGGGCCCCAGATTGACTTCACAGAGCCCCAGTAAA...TGAGAGATGTAATATATGACATTGCCAGTCAAGCACACTTGCACCTAAAGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517976.5
ENST00000520757.1
CDS-3UTR GCA 90 bp AGTCCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATAAAGACCACCATCTGTTGTaGTGGACTCCTGCTGACTCC +
Preference number: 4 (lower is better)
Translates to: SPTATSQFCELLDIPFNKDHHLL*WTPADS
Trigger: GGAGTCAGCAGGAGTCCAGCACAACAGATGGTGGTC...TTTATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396111.6
ENST00000396113.5
CDS-3UTR GCA 90 bp CAAAATCCACTCGCTGAATTTTCTTTAGAAAGTCCTCTAGAGAAACCGTCTGAAAGAGCTTCGGGATTCTaGAGGGAGCAGCAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: QNPLAEFSLESPLEKPSERASGF*REQQGA
Trigger: TGCTCCCTGCTGCTCCCTGCAGAATCCCGAAGCTCT...TTCAGACGGTTTCTCTAGAGGACTTTCTAAAGAAAATTCAGCGAGTGGATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
CDS-3UTR GCA 90 bp GTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGCTCCAGACTTGCAGCATGATCTaGATGAAGATCCTTTATACC +
Preference number: 4 (lower is better)
Translates to: VWLMAYAQLHQYSLLELQTCSMI*MKILYT
Trigger: GGTATAAAGGATCTTCATGCAGATCATGCTGCAAGT...CTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CCA 90 bp TGGCTCAAGTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGCACAGGCTGATGTGGTaGATTGTCACAGTATATATC +
Preference number: 4 (lower is better)
Translates to: WLKCGLWPMHSYTNIPCWHRLMW*IVTVYI
Trigger: GATATATACTGTGACAATCCACCACATCAGCCTGTG...CCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CCA 90 bp TGTTGCTCTCAAGCAAGTGACAATGCCTTGTGCTTTTCCAATATGACTTGCAGCCCTTCCATAGTTCAATaGCCACAGGCTGATGTGGTG +
Preference number: 4 (lower is better)
Translates to: CCSQASDNALCFSNMTCSPSIVQ*PQADVV
Trigger: CACCACATCAGCCTGTGGCCATTGAACTATGGAAGG...GCTGCAAGTCATATTGGAAAAGCACAAGGCATTGTCACTTGCTTGAGAGCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000518258.5
ENST00000520757.1
ENST00000523337.5
CDS-3UTR CCA 90 bp AGGGCAATTTCTAGGAGAGGTGAGTCACCACTCTTTAGAGATTTCAAAGCCCCGTCTGCTCCCATGATATaGTGTTGCTCTCAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: RAISRRGESPLFRDFKAPSAPMI*CCSQAS
Trigger: ACTTGCTTGAGAGCAACACCATATCATGGGAGCAGA...CGGGGCTTTGAAATCTCTAAAGAGTGGTGACTCACCTCTCCTAGAAATTGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520757.1
CDS-3UTR CCA 90 bp TGTGGGTGGCTCCTGTTACAGAAACCCTCTTTTGGCAATCACTTCCATAGTTCAACTTCCATAGTTCAATaGCCACAGGCTGATGTGGTG +
Preference number: 4 (lower is better)
Translates to: CGWLLLQKPSFGNHFHSSTSIVQ*PQADVV
Trigger: CACCACATCAGCCTGTGGCCATTGAACTATGGAAGT...TGAACTATGGAAGTGATTGCCAAAAGAGGGTTTCTGTAACAGGAGCCACCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517976.5
ENST00000522683.5
CDS-3UTR CCA 90 bp TCCATAGTTCAATGGCCACAGGCTGATGTGGTGGATTGTCACAGTATATATCTTTCTGTGAAGTCAATCTaGGGCCCAGAAACTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SIVQWPQADVVDCHSIYLSVKSI*GPETGP
Trigger: AGGCCCAGTTTCTGGGCCCCAGATTGACTTCACAGA...AAGATATATACTGTGACAATCCACCACATCAGCCTGTGGCCATTGAACTATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517976.5
ENST00000520632.5
CDS-3UTR CCA 90 bp CATTTTTATCTTGGTTCCTCCGTAGAAAGTCCTCTTGTGAAACACCATGCAGCATCTGTGAAGTCAATCTaGGGCCCAGAAACTGGGCCT +
Preference number: 4 (lower is better)
Translates to: HFYLGSSVESPLVKHHAASVKSI*GPETGP
Trigger: AGGCCCAGTTTCTGGGCCCCAGATTGACTTCACAGA...TGCTGCATGGTGTTTCACAAGAGGACTTTCTACGGAGGAACCAAGATAAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517976.5
ENST00000520757.1
CDS-3UTR CCA 90 bp CAGCCTAGTGCCCAGACACTTGTCTCTACTACCATTCTCCTTAAAGGAATCAGGTTCCAAATATCCTGGTaGTGGGTGGGTTTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: QPSAQTLVSTTILLKGIRFQISW*WVGFLA
Trigger: TGCTAAGAAACCCACCCACCACCAGGATATTTGGAA...CCTGATTCCTTTAAGGAGAATGGTAGTAGAGACAAGTGTCTGGGCACTAGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518258.5
CDS-3UTR TCA 90 bp GCTTTAGGTGCAAGTGTGCTTGACTGGCAATGTCATATATTACATCTCTCACATTCAATGGCCACAGGCTaGTGTGGTGGATTGTCACAG +
Preference number: 4 (lower is better)
Translates to: ALGASVLDWQCHILHLSHSMATG*CGGLSQ
Trigger: CTGTGACAATCCACCACATCAGCCTGTGGCCATTGA...ATGTGAGAGATGTAATATATGACATTGCCAGTCAAGCACACTTGCACCTAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR TCA 90 bp GTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGCTCCAGCCCACAACACGTGACTaGTATTCCTCAAATATTAAT +
Preference number: 4 (lower is better)
Translates to: VWLMAYAQLHQYSLLELQPTTRD*YSSNIN
Trigger: ATTAATATTTGAGGAATATCAGTCACGTGTTGTGGG...CTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR TCA 90 bp CATACAAATATCCATGGGAAGGAACACCTTTCTTCTGCTCCCATGATATGGTGTGCAAGACACACGCCCTaGGTGTCTGCATCCTTAATT +
Preference number: 4 (lower is better)
Translates to: HTNIHGKEHLSSAPMIWCARHTP*VSASLI
Trigger: AATTAAGGATGCAGACACTCAGGGCGTGTGTCTTGC...ACACCATATCATGGGAGCAGAAGAAAGGTGTTCCTTCCCATGGATATTTGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520757.1
CDS-3UTR GCA 90 bp GACTTGCAGCATGATCTGCATGAAGATCCTTTATACCCAATATTTCTAGTGTTAAGAGCTTCGGGATTCTaGAGGGAGCAGCAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: DLQHDLHEDPLYPIFLVLRASGF*REQQGA
Trigger: TGCTCCCTGCTGCTCCCTGCAGAATCCCGAAGCTCT...TAACACTAGAAATATTGGGTATAAAGGATCTTCATGCAGATCATGCTGCAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520632.5
ENST00000520757.1
ENST00000523337.5
CDS-3UTR GCA 90 bp AAGCCATCTTTTAGTCAGATTATGTCTTTTAACAGCAGCTTCCCATCCACTTTTAGAGCTTCGGGATTCTaGAGGGAGCAGCAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: KPSFSQIMSFNSSFPSTFRASGF*REQQGA
Trigger: TGCTCCCTGCTGCTCCCTGCAGAATCCCGAAGCTCT...AAAAGTGGATGGGAAGCTGCTGTTAAAAGACATAATCTGACTAAAAGATGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000517976.5
ENST00000520632.5
ENST00000520757.1
CDS-3UTR GCA 90 bp CTGGCTCAAGTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGAGTGACAATGCCTTGTaGTTTTCCAATATGACTTGC +
Preference number: 4 (lower is better)
Translates to: LAQVWLMAYAQLHQYSLLSDNAL*FSNMTC
Trigger: GCAAGTCATATTGGAAAAGCACAAGGCATTGTCACT...CAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp AACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTCTGCTCCCGGAACACCTTTCTTCTaGTCCCATGATATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: NTMQHTNIHGKEHLSSAPGTPFF*SHDMVL
Trigger: CAACACCATATCATGGGAGCAGAAGAAAGGTGTTCC...GGGAGCAGAAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR CCA 90 bp AGTCCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATAAACTCTTGAGCAGAGGGTaGAGCTCCAGACACTTCATG +
Preference number: 4 (lower is better)
Translates to: SPTATSQFCELLDIPFNKLLSRG*SSRHFM
Trigger: CATGAAGTGTCTGGAGCTCCACCCTCTGCTCAAGAG...TTTATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396111.6
ENST00000396113.5
CDS-3UTR CCA 90 bp AACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTCTGCTCCCTCTGCTCCCATGATATaGTGTTGCTCTCAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: NTMQHTNIHGKEHLSSAPSAPMI*CCSQAS
Trigger: ACTTGCTTGAGAGCAACACCATATCATGGGAGCAGA...GGGAGCAGAAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR CCA 90 bp AAGCCATCTTTTAGTCAGATTATGTCTTTTAACAGCAGCTTCCCATCCACTTTTTGGGCCTGCCTCTGCTaGTGTGCAGACCTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: KPSFSQIMSFNSSFPSTFWACLC*CADLRR
Trigger: TCTTCTCAGGTCTGCACACCAGCAGAGGCAGGCCCA...AAAAGTGGATGGGAAGCTGCTGTTAAAAGACATAATCTGACTAAAAGATGGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517976.5
3UTR CAA 72 bp TTCCAGCAAAGTGGCTCTCCTTTCCTGATTTTGATTTaGTGTAGTTGCCCAGTCTGGCTCACACTAACATCG +
Preference number: 4 (lower is better)
Translates to: FQQSGSPFLILI*CSCPVWLTLTS
Trigger: CGATGTTAGTGTGAGCCAGACTGGGCAACTACACAAAATCAAAATCAGGAAAGGAGAGCCACTTTGCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520757.1
CDS-3UTR TCA 90 bp GTGAAACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTCTGCTTGCTCTCAAGCAAGTaGCAATGCCTTGTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: VKHHAAYKYPWEGTPFFCLLSSK*QCLVLF
Trigger: GAAAAGCACAAGGCATTGTCACTTGCTTGAGAGCAA...GCAGAAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGTTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR TCA 90 bp AAACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTCTGCTCCTTTCTTCTGCTCCCATaGTATGGTGTTGCTCTCAAG +
Preference number: 4 (lower is better)
Translates to: KHHAAYKYPWEGTPFFCSFLLLP*YGVALK
Trigger: CTTGAGAGCAACACCATATCATGGGAGCAGAAGAAA...GGAGCAGAAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR TCA 90 bp CTGGCTCAAGTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGTCAAAATCCACTCGCTaGATTTTCTTTAGAAAGTCC +
Preference number: 4 (lower is better)
Translates to: LAQVWLMAYAQLHQYSLLSKSTR*IFFRKS
Trigger: GGACTTTCTAAAGAAAATTCAGCGAGTGGATTTTGA...CAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR TCA 90 bp TGGCTCAAGTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGTCAAAATCCACTCGCTaGATTTTCTTTAGAAAGTCC +
Preference number: 4 (lower is better)
Translates to: WLKCGLWPMHSYTNIPCWSKSTR*IFFRKS
Trigger: GGACTTTCTAAAGAAAATTCAGCGAGTGGATTTTGA...CCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR TCA 90 bp CCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATAAATTCGCCCCTATGATAACTTaGGCCCTTTCCCCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: PTATSQFCELLDIPFNKFAPMIT*ALSPFL
Trigger: AAGGAAAGGGGAAAGGGCTCAAGTTATCATAGGGGC...GAATTTATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR TCA 90 bp CTGGCTCAAGTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGCCCACAACACGTGACTaGTATTCCTCAAATATTAAT +
Preference number: 4 (lower is better)
Translates to: LAQVWLMAYAQLHQYSLLPTTRD*YSSNIN
Trigger: ATTAATATTTGAGGAATATCAGTCACGTGTTGTGGG...CAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR TCA 90 bp CCTAGTCCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATTGTTTTCTCAGAGACTaGGTCTTTAACCTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PSPTATSQFCELLDIPFNCFLRD*VFNLSQ
Trigger: CTGGCTCAGGTTAAAGACTCAGTCTCTGAGAAAACA...ATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGGACTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396124.9
CDS-3UTR GCA 90 bp CAATATGACTTGCAGCATGATCTGCATGAAGATCCTTTATACCCAATATTTCTAAGAGCTTCGGGATTCTaGAGGGAGCAGCAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: QYDLQHDLHEDPLYPIFLRASGF*REQQGA
Trigger: TGCTCCCTGCTGCTCCCTGCAGAATCCCGAAGCTCT...TAGAAATATTGGGTATAAAGGATCTTCATGCAGATCATGCTGCAAGTCATATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520632.5
ENST00000520757.1
ENST00000523337.5
CDS-3UTR GCA 90 bp GTGAAACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTCTGCATTAAAGGCCCTCAGTaGAAAAACAGAGCTTCGGGA +
Preference number: 4 (lower is better)
Translates to: VKHHAAYKYPWEGTPFFCIKGPQ*KNRASG
Trigger: TCCCGAAGCTCTGTTTTTGCACTGAGGGCCTTTAAT...GCAGAAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGTTTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR GCA 90 bp GAAACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTCTGCTCATTAAAGGCCCTCAGTaGAAAAACAGAGCTTCGGGA +
Preference number: 4 (lower is better)
Translates to: ETPCSIQISMGRNTFLLLIKGPQ*KNRASG
Trigger: TCCCGAAGCTCTGTTTTTGCACTGAGGGCCTTTAAT...GAGCAGAAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR GCA 90 bp GTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGCTCCAGCTAGTAATGTATTCTTCTaGTGTAAAGATGGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: VAYGLCTATPIFPVGAPASNVFF*CKDGWN
Trigger: ATTCCACCCATCTTTACAGCAGAAGAATACATTACT...AGCTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp CCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATAAATTCCAATGGCAGTGCCTCTaGCAGAATCTCAGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: PTATSQFCELLDIPFNKFQWQCL*QNLSSL
Trigger: AAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTG...GAATTTATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp CCTAGTCCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATGTGGCTTATGGCCTATaGACAGCTACACCAATATTC +
Preference number: 4 (lower is better)
Translates to: PSPTATSQFCELLDIPFNVAYGL*TATPIF
Trigger: GAATATTGGTGTAGCTGTGCATAGGCCATAAGCCAC...ATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGGACTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CCA 90 bp CCTAGTCCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATGTGAGCCACTGCACCTaGTCCAAACATCAGTATTTT +
Preference number: 4 (lower is better)
Translates to: PSPTATSQFCELLDIPFNVSHCT*SKHQYF
Trigger: AAAATACTGATGTTTGGACCAGGTGCAGTGGCTCAC...ATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGGACTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS-3UTR CCA 90 bp AATGGCCACAGGCTGATGTGGTGGATTGTCACAGTATATATCTTCCACAGTTTTGGCCACAGGCTGATGTaGTGGATTGTCACAGTATAT +
Preference number: 4 (lower is better)
Translates to: NGHRLMWWIVTVYIFHSFGHRLM*WIVTVY
Trigger: ATATACTGTGACAATCCACCACATCAGCCTGTGGCC...AAAACTGTGGAAGATATATACTGTGACAATCCACCACATCAGCCTGTGGCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000518608.5
ENST00000520632.5
ENST00000522683.5
ENST00000523337.5
CDS-3UTR CCA 90 bp AGTCCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATAAACCTTCCATAGTTCAATaGCCACAGGCTGATGTGGTG +
Preference number: 4 (lower is better)
Translates to: SPTATSQFCELLDIPFNKPSIVQ*PQADVV
Trigger: CACCACATCAGCCTGTGGCCATTGAACTATGGAAGG...TTTATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CCA 90 bp GCGACAAGAGTGAGACTTCTTTCATCGACGATTTTCATAAGCCATCTTTTAGTCCCTTCCATAGTTCAATaGCCACAGGCTGATGTGGTG +
Preference number: 4 (lower is better)
Translates to: ATRVRLLSSTIFISHLLVPSIVQ*PQADVV
Trigger: CACCACATCAGCCTGTGGCCATTGAACTATGGAAGG...GACTAAAAGATGGCTTATGAAAATCGTCGATGAAAGAAGTCTCACTCTTGTCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518608.5
ENST00000520632.5
CDS-3UTR CCA 90 bp CCTAGTCCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATTCTGCTCCCATGATATaGTGTTGCTCTCAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: PSPTATSQFCELLDIPFNSAPMI*CCSQAS
Trigger: ACTTGCTTGAGAGCAACACCATATCATGGGAGCAGA...ATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGGACTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CCA 90 bp CAATGGCCACAGGCTGATGTGGTGGATTGTCACAGTATATATCTTCCACAGTTTTCTGCTCCCATGATATaGTGTTGCTCTCAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: QWPQADVVDCHSIYLPQFSAPMI*CCSQAS
Trigger: ACTTGCTTGAGAGCAACACCATATCATGGGAGCAGA...AAACTGTGGAAGATATATACTGTGACAATCCACCACATCAGCCTGTGGCCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
CDS-3UTR CCA 90 bp CCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATAAATTCCTCAAGTGTGGCTTATaGCCTATGCACAGCTACACC +
Preference number: 4 (lower is better)
Translates to: PTATSQFCELLDIPFNKFLKCGL*PMHSYT
Trigger: GGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAG...GAATTTATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CCA 90 bp TGTTGCTCTCAAGCAAGTGACAATGCCTTGTGCTTTTCCAATATGACTTGCAGCGCTTTCCATCTTTACTaGGGCTCTGTGAAGTCAATC +
Preference number: 4 (lower is better)
Translates to: CCSQASDNALCFSNMTCSAFHLY*GSVKSI
Trigger: GATTGACTTCACAGAGCCCCAGTAAAGATGGAAAGC...GCTGCAAGTCATATTGGAAAAGCACAAGGCATTGTCACTTGCTTGAGAGCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517976.5
ENST00000520757.1
CDS-3UTR CCA 90 bp TTCCAAAACTGCATTCGCATCAGTCCAATTGTTTTCTCAGAGACTGAGTCTTTAAGGGCTCTCGAGAAATaGGCGATTCCAAAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: FQNCIRISPIVFSETESLRALEK*AIPKVR
Trigger: CCTCACCTTTGGAATCGCCCATTTCTCGAGAGCCCT...TAAAGACTCAGTCTCTGAGAAAACAATTGGACTGATGCGAATGCAGTTTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518258.5
CDS-3UTR TCA 90 bp TATCAAAATCCACTCGCTGAATTTTCTTTAGAAAGTCCTCTAGAGAAACCGTCTTCAATGGCCACAGGCTaGTGTGGTGGATTGTCACAG +
Preference number: 4 (lower is better)
Translates to: YQNPLAEFSLESPLEKPSSMATG*CGGLSQ
Trigger: CTGTGACAATCCACCACATCAGCCTGTGGCCATTGA...AGACGGTTTCTCTAGAGGACTTTCTAAAGAAAATTCAGCGAGTGGATTTTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
CDS-3UTR TCA 90 bp GAGACTGAGTCTTTAACTTTTCCATATGTGAAGTTACTTCCAAATATCCTGGTGTCAATGGCCACAGGCTaGTGTGGTGGATTGTCACAG +
Preference number: 4 (lower is better)
Translates to: ETESLTFPYVKLLPNILVSMATG*CGGLSQ
Trigger: CTGTGACAATCCACCACATCAGCCTGTGGCCATTGA...CACCAGGATATTTGGAAGTAACTTCACATATGGAAAAGTTAAAGACTCAGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518258.5
ENST00000522683.5
ENST00000523337.5
CDS-3UTR TCA 90 bp TCTCAAGCAAGTGACAATGCCTTGTGCTTTTCCAATATGACTTGCAGCATGATCTTGCTCTCAAGCAAGTaGCAATGCCTTGTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: SQASDNALCFSNMTCSMILLSSK*QCLVLF
Trigger: GAAAAGCACAAGGCATTGTCACTTGCTTGAGAGCAA...GATCATGCTGCAAGTCATATTGGAAAAGCACAAGGCATTGTCACTTGCTTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
ENST00000523337.5
CDS-3UTR TCA 90 bp GTGAAACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTCTGCACAGGAACAGTTTTGTaGAAGGACCTAGCATGCTTT +
Preference number: 4 (lower is better)
Translates to: VKHHAAYKYPWEGTPFFCTGTVL*KDLACF
Trigger: AAAGCATGCTAGGTCCTTTCACAAAACTGTTCCTGT...GCAGAAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGTTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR TCA 90 bp CCTAGTCCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATTCTAGAGAAACCGTCTaGAGAAAAGCAGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: PSPTATSQFCELLDIPFNSRETV*RKAGNA
Trigger: AGCATTTCCTGCTTTTCTTCAGACGGTTTCTCTAGA...ATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGGACTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR TCA 90 bp GCGACAAGAGTGAGACTTCTTTCATCGACGATTTTCATAAGCCATCTTTTAGTCTGTTTTCTCAGAGACTaGGTCTTTAACCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ATRVRLLSSTIFISHLLVCFLRD*VFNRSS
Trigger: GCTGCTGCGGTTAAAGACTCAGTCTCTGAGAAAACA...GACTAAAAGATGGCTTATGAAAATCGTCGATGAAAGAAGTCTCACTCTTGTCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518608.5
CDS-3UTR TCA 90 bp GACTTGCAGCATGATCTGCATGAAGATCCTTTATACCCAATATTTCTAGTGTTACCTGGGCGACAAGAGTaGGACTTCTTTCATCGACGA +
Preference number: 4 (lower is better)
Translates to: DLQHDLHEDPLYPIFLVLPGRQE*DFFHRR
Trigger: TCGTCGATGAAAGAAGTCTCACTCTTGTCGCCCAGG...TAACACTAGAAATATTGGGTATAAAGGATCTTCATGCAGATCATGCTGCAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520632.5
CDS-3UTR TCA 90 bp TCCATAGTTCAATGGCCACAGGCTGATGTGGTGGATTGTCACAGTATATATCTTAAGAGTAATCCAGCCTaGGCCAGTTCCACATTAAAG +
Preference number: 4 (lower is better)
Translates to: SIVQWPQADVVDCHSIYLKSNPA*ASSTLK
Trigger: CTTTAATGTGGAACTGGCTCAGGCTGGATTACTCTT...AAGATATATACTGTGACAATCCACCACATCAGCCTGTGGCCATTGAACTATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518258.5
ENST00000522683.5
ENST00000523337.5
CDS-3UTR GCA 90 bp TCCATAGTTCAATGGCCACAGGCTGATGTGGTGGATTGTCACAGTATATATCTTATTAAAGGCCCTCAGTaGAAAAACAGAGCTTCGGGA +
Preference number: 4 (lower is better)
Translates to: SIVQWPQADVVDCHSIYLIKGPQ*KNRASG
Trigger: TCCCGAAGCTCTGTTTTTGCACTGAGGGCCTTTAAT...AAGATATATACTGTGACAATCCACCACATCAGCCTGTGGCCATTGAACTATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520632.5
ENST00000522683.5
ENST00000523337.5
CDS-3UTR GCA 90 bp ACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTCTGCTCCCAAGTGACAATGCCTTGTaGTTTTCCAATATGACTTGC +
Preference number: 4 (lower is better)
Translates to: TPCSIQISMGRNTFLLLPSDNAL*FSNMTC
Trigger: GCAAGTCATATTGGAAAAGCACAAGGCATTGTCACT...TGGGAGCAGAAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR GCA 90 bp CATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTCTGCTCCCATGATCCCATGATATGGTGTTaGTCTCAAGCAAGTGACAAT +
Preference number: 4 (lower is better)
Translates to: HAAYKYPWEGTPFFCSHDPMIWC*SQASDN
Trigger: ATTGTCACTTGCTTGAGAGCAACACCATATCATGGG...ATCATGGGAGCAGAAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR GCA 90 bp CATTTTTATCTTGGTTCCTCCGTAGAAAGTCCTCTTGTGAAACACCATGCAGCAGGAACACCTTTCTTCTaGTCCCATGATATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: HFYLGSSVESPLVKHHAAGTPFF*SHDMVL
Trigger: CAACACCATATCATGGGAGCAGAAGAAAGGTGTTCC...TGCTGCATGGTGTTTCACAAGAGGACTTTCTACGGAGGAACCAAGATAAAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR GCA 90 bp TGGCTCAAGTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGTAATGTATTCTTCTaGTGTAAAGATGGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: WLKCGLWPMHSYTNIPCWSNVFF*CKDGWN
Trigger: ATTCCACCCATCTTTACAGCAGAAGAATACATTACT...CCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp CCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATAAATTCGTCAAATTAAGGCTCTaGTCTTGCCAGCCACTCCAA +
Preference number: 4 (lower is better)
Translates to: PTATSQFCELLDIPFNKFVKLRL*SCQPLQ
Trigger: TTGGAGTGGCTGGCAAGAGCAGAGCCTTAATTTGAC...GAATTTATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp TGTTGCTCTCAAGCAAGTGACAATGCCTTGTGCTTTTCCAATATGACTTGCAGCTTGATTTTGTGTAGTTaGCCAGTCTGGCTCACACTA +
Preference number: 4 (lower is better)
Translates to: CCSQASDNALCFSNMTCSLILCS*PVWLTL
Trigger: TAGTGTGAGCCAGACTGGGCAACTACACAAAATCAA...GCTGCAAGTCATATTGGAAAAGCACAAGGCATTGTCACTTGCTTGAGAGCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520757.1
CDS-3UTR CCA 90 bp CCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATAAATTCGGCCACAGGCTGATGTaGTGGATTGTCACAGTATAT +
Preference number: 4 (lower is better)
Translates to: PTATSQFCELLDIPFNKFGHRLM*WIVTVY
Trigger: ATATACTGTGACAATCCACCACATCAGCCTGTGGCC...GAATTTATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CCA 90 bp ATGATATGGTGTTGCTCTCAAGCAAGTGACAATGCCTTGTGCTTTTCCAATATGGGCCACAGGCTGATGTaGTGGATTGTCACAGTATAT +
Preference number: 4 (lower is better)
Translates to: MIWCCSQASDNALCFSNMGHRLM*WIVTVY
Trigger: ATATACTGTGACAATCCACCACATCAGCCTGTGGCC...CATATTGGAAAAGCACAAGGCATTGTCACTTGCTTGAGAGCAACACCATATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
ENST00000523337.5
CDS-3UTR CCA 90 bp AACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTCTGCTCCCCTCACATTTTTATCTTaGTTCCTCCGTAGAAAGTCC +
Preference number: 4 (lower is better)
Translates to: NTMQHTNIHGKEHLSSAPLTFLS*FLRRKS
Trigger: GGACTTTCTACGGAGGAACCAAGATAAAAATGTGAG...GGGAGCAGAAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR CCA 90 bp ACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTCTGCTCCCACTCACATTTTTATCTTaGTTCCTCCGTAGAAAGTCC +
Preference number: 4 (lower is better)
Translates to: TPCSIQISMGRNTFLLLPLTFLS*FLRRKS
Trigger: GGACTTTCTACGGAGGAACCAAGATAAAAATGTGAG...TGGGAGCAGAAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR CCA 90 bp TCCATAGTTCAATGGCCACAGGCTGATGTGGTGGATTGTCACAGTATATATCTTTTCCAAATATCCTGGTaGTGGGTGGGTTTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: SIVQWPQADVVDCHSIYLFQISW*WVGFLA
Trigger: TGCTAAGAAACCCACCCACCACCAGGATATTTGGAA...AAGATATATACTGTGACAATCCACCACATCAGCCTGTGGCCATTGAACTATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518258.5
ENST00000522683.5
ENST00000523337.5
3UTR CAA 72 bp CAGATTATGTCTTTTAACAGCCTAGTGCCCAGACACTaGTCTCTACTACCATTCTCCTTAAAGGAATCAGGG +
Preference number: 4 (lower is better)
Translates to: QIMSFNSLVPRH*SLLPFSLKESG
Trigger: CCCTGATTCCTTTAAGGAGAATGGTAGTAGAGACAAGTGTCTGGGCACTAGGCTGTTAAAAGACATAATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518258.5
CDS-3UTR TCA 90 bp ATGATATGGTGTTGCTCTCAAGCAAGTGACAATGCCTTGTGCTTTTCCAATATGTTTCTTCTGCTCCCATaGTATGGTGTTGCTCTCAAG +
Preference number: 4 (lower is better)
Translates to: MIWCCSQASDNALCFSNMFLLLP*YGVALK
Trigger: CTTGAGAGCAACACCATATCATGGGAGCAGAAGAAA...CATATTGGAAAAGCACAAGGCATTGTCACTTGCTTGAGAGCAACACCATATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR TCA 90 bp CATACAAATATCCATGGGAAGGAACACCTTTCTTCTGCTCCCATGATATGGTGTAGGTGCAAGTGTGCTTaGCTGGCAATGTCATATATT +
Preference number: 4 (lower is better)
Translates to: HTNIHGKEHLSSAPMIWCRCKCA*LAMSYI
Trigger: AATATATGACATTGCCAGTCAAGCACACTTGCACCT...ACACCATATCATGGGAGCAGAAGAAAGGTGTTCCTTCCCATGGATATTTGTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR TCA 90 bp CATTTTTATCTTGGTTCCTCCGTAGAAAGTCCTCTTGTGAAACACCATGCAGCATCTAGAGAAACCGTCTaGAGAAAAGCAGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: HFYLGSSVESPLVKHHAASRETV*RKAGNA
Trigger: AGCATTTCCTGCTTTTCTTCAGACGGTTTCTCTAGA...TGCTGCATGGTGTTTCACAAGAGGACTTTCTACGGAGGAACCAAGATAAAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
CDS-3UTR TCA 90 bp AATGGCCACAGGCTGATGTGGTGGATTGTCACAGTATATATCTTCCACAGTTTTTCTAGAGAAACCGTCTaGAGAAAAGCAGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: NGHRLMWWIVTVYIFHSFSRETV*RKAGNA
Trigger: AGCATTTCCTGCTTTTCTTCAGACGGTTTCTCTAGA...AAAACTGTGGAAGATATATACTGTGACAATCCACCACATCAGCCTGTGGCCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
CDS-3UTR TCA 90 bp CCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATAAATTCCATGATAATGCTGAATaGCAGAGTGAGGAAGTGGGA +
Preference number: 4 (lower is better)
Translates to: PTATSQFCELLDIPFNKFHDNAE*QSEEVG
Trigger: TCCCACTTCCTCACTCTGTCATTCAGCATTATCATG...GAATTTATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR TCA 90 bp AGTCCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATAAACATGATAATGCTGAATaGCAGAGTGAGGAAGTGGGA +
Preference number: 4 (lower is better)
Translates to: SPTATSQFCELLDIPFNKHDNAE*QSEEVG
Trigger: TCCCACTTCCTCACTCTGTCATTCAGCATTATCATG...TTTATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR TCA 90 bp TCTTGTGAAACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTTGTTTTCTCAGAGACTaGGTCTTTAACCTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SCETPCSIQISMGRNTFLCFLRD*VFNLSQ
Trigger: CTGGCTCAGGTTAAAGACTCAGTCTCTGAGAAAACA...AAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGTTTCACAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520757.1
CDS-3UTR TCA 90 bp TATATTACATCTCTCACATTTTTATCTTGGTTCCTCCGTAGAAAGTCCTCTTGTGTGTGCGTGTTCGAGTaGAGCAAGATTGGCCTAGAG +
Preference number: 4 (lower is better)
Translates to: YITSLTFLSWFLRRKSSCVCVFE*SKIGLE
Trigger: CTCTAGGCCAATCTTGCTTCACTCGAACACGCACAC...ACAAGAGGACTTTCTACGGAGGAACCAAGATAAAAATGTGAGAGATGTAATATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520757.1
CDS-3UTR GCA 90 bp CCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATAAATTCATTAAAGGCCCTCAGTaGAAAAACAGAGCTTCGGGA +
Preference number: 4 (lower is better)
Translates to: PTATSQFCELLDIPFNKFIKGPQ*KNRASG
Trigger: TCCCGAAGCTCTGTTTTTGCACTGAGGGCCTTTAAT...GAATTTATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp TCTTGTGAAACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTATTAAAGGCCCTCAGTaGAAAAACAGAGCTTCGGGA +
Preference number: 4 (lower is better)
Translates to: SCETPCSIQISMGRNTFLIKGPQ*KNRASG
Trigger: TCCCGAAGCTCTGTTTTTGCACTGAGGGCCTTTAAT...AAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGTTTCACAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR GCA 90 bp TGTTGCTCTCAAGCAAGTGACAATGCCTTGTGCTTTTCCAATATGACTTGCAGCACTTGCAGCATGATCTaGATGAAGATCCTTTATACC +
Preference number: 4 (lower is better)
Translates to: CCSQASDNALCFSNMTCSTCSMI*MKILYT
Trigger: GGTATAAAGGATCTTCATGCAGATCATGCTGCAAGT...GCTGCAAGTCATATTGGAAAAGCACAAGGCATTGTCACTTGCTTGAGAGCAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
ENST00000523337.5
CDS-3UTR GCA 90 bp TGTGAAACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTCTGCCCATGATATGGTGTTaGTCTCAAGCAAGTGACAAT +
Preference number: 4 (lower is better)
Translates to: CETPCSIQISMGRNTFLLPMIWC*SQASDN
Trigger: ATTGTCACTTGCTTGAGAGCAACACCATATCATGGG...CAGAAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGTTTCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR GCA 90 bp TGTGGGTGGCTCCTGTTACAGAAACCCTCTTTTGGCAATCACTTCCATAGTTCATCTTGTGAAACACCATaGAGCATACAAATATCCATG +
Preference number: 4 (lower is better)
Translates to: CGWLLLQKPSFGNHFHSSSCETP*SIQISM
Trigger: CATGGATATTTGTATGCTGCATGGTGTTTCACAAGA...TGAACTATGGAAGTGATTGCCAAAAGAGGGTTTCTGTAACAGGAGCCACCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517976.5
CDS-3UTR GCA 90 bp CCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATAAATTCGTGGCTTATGGCCTATaGACAGCTACACCAATATTC +
Preference number: 4 (lower is better)
Translates to: PTATSQFCELLDIPFNKFVAYGL*TATPIF
Trigger: GAATATTGGTGTAGCTGTGCATAGGCCATAAGCCAC...GAATTTATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CCA 90 bp TGTGAAACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTCTGCACAGGCTGATGTGGTaGATTGTCACAGTATATATC +
Preference number: 4 (lower is better)
Translates to: CETPCSIQISMGRNTFLLHRLMW*IVTVYI
Trigger: GATATATACTGTGACAATCCACCACATCAGCCTGTG...CAGAAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGTTTCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR CCA 90 bp TCCATAGTTCAATGGCCACAGGCTGATGTGGTGGATTGTCACAGTATATATCTTCACAGGCTGATGTGGTaGATTGTCACAGTATATATC +
Preference number: 4 (lower is better)
Translates to: SIVQWPQADVVDCHSIYLHRLMW*IVTVYI
Trigger: GATATATACTGTGACAATCCACCACATCAGCCTGTG...AAGATATATACTGTGACAATCCACCACATCAGCCTGTGGCCATTGAACTATGGA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000518608.5
ENST00000520632.5
ENST00000522683.5
ENST00000523337.5
CDS-3UTR CCA 90 bp AATCCACTCGCTGAATTTTCTTTAGAAAGTCCTCTAGAGAAACCGTCTGAAGAAGGCCACAGGCTGATGTaGTGGATTGTCACAGTATAT +
Preference number: 4 (lower is better)
Translates to: NPLAEFSLESPLEKPSEEGHRLM*WIVTVY
Trigger: ATATACTGTGACAATCCACCACATCAGCCTGTGGCC...TTCTTCAGACGGTTTCTCTAGAGGACTTTCTAAAGAAAATTCAGCGAGTGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
CDS-3UTR CCA 90 bp CCTAGTCCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATCTCACATTTTTATCTTaGTTCCTCCGTAGAAAGTCC +
Preference number: 4 (lower is better)
Translates to: PSPTATSQFCELLDIPFNLTFLS*FLRRKS
Trigger: GGACTTTCTACGGAGGAACCAAGATAAAAATGTGAG...ATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGGACTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CCA 90 bp AAACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTCTGCTCCCTCACATTTTTATCTTaGTTCCTCCGTAGAAAGTCC +
Preference number: 4 (lower is better)
Translates to: KHHAAYKYPWEGTPFFCSLTFLS*FLRRKS
Trigger: GGACTTTCTACGGAGGAACCAAGATAAAAATGTGAG...GGAGCAGAAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR CCA 90 bp GTTTTCAGCATAATTTTCCAGTTCCTTGATATTACGATATGCTTTGTCATCCAGTGTCAGGTCTGTGGGTaGCTCCTGTTACAGAAACCC +
Preference number: 4 (lower is better)
Translates to: VFSIIFQFLDITICFVIQCQVCG*LLLQKP
Trigger: GGGTTTCTGTAACAGGAGCCACCCACAGACCTGACA...CTGGATGACAAAGCATATCGTAATATCAAGGAACTGGAAAATTATGCTGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517976.5
CDS-3UTR TCA 90 bp AATCCACTCGCTGAATTTTCTTTAGAAAGTCCTCTAGAGAAACCGTCTGAAGAATTGCTCTCAAGCAAGTaGCAATGCCTTGTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: NPLAEFSLESPLEKPSEELLSSK*QCLVLF
Trigger: GAAAAGCACAAGGCATTGTCACTTGCTTGAGAGCAA...TTCTTCAGACGGTTTCTCTAGAGGACTTTCTAAAGAAAATTCAGCGAGTGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
CDS-3UTR TCA 90 bp CAAAATCCACTCGCTGAATTTTCTTTAGAAAGTCCTCTAGAGAAACCGTCTGAATTTCTTCTGCTCCCATaGTATGGTGTTGCTCTCAAG +
Preference number: 4 (lower is better)
Translates to: QNPLAEFSLESPLEKPSEFLLLP*YGVALK
Trigger: CTTGAGAGCAACACCATATCATGGGAGCAGAAGAAA...TTCAGACGGTTTCTCTAGAGGACTTTCTAAAGAAAATTCAGCGAGTGGATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
CDS-3UTR TCA 90 bp CTCTCACATTTTTATCTTGGTTCCTCCGTAGAAAGTCCTCTTGTGAAACACCATACAGGAACAGTTTTGTaGAAGGACCTAGCATGCTTT +
Preference number: 4 (lower is better)
Translates to: LSHFYLGSSVESPLVKHHTGTVL*KDLACF
Trigger: AAAGCATGCTAGGTCCTTTCACAAAACTGTTCCTGT...ATGGTGTTTCACAAGAGGACTTTCTACGGAGGAACCAAGATAAAAATGTGAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR TCA 90 bp GTGAAACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTCTGCTCAAAATCCACTCGCTaGATTTTCTTTAGAAAGTCC +
Preference number: 4 (lower is better)
Translates to: VKHHAAYKYPWEGTPFFCSKSTR*IFFRKS
Trigger: GGACTTTCTAAAGAAAATTCAGCGAGTGGATTTTGA...GCAGAAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGTTTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
CDS-3UTR GCA 90 bp TCCATAGTTCAATGGCCACAGGCTGATGTGGTGGATTGTCACAGTATATATCTTACTTGCAGCATGATCTaGATGAAGATCCTTTATACC +
Preference number: 4 (lower is better)
Translates to: SIVQWPQADVVDCHSIYLTCSMI*MKILYT
Trigger: GGTATAAAGGATCTTCATGCAGATCATGCTGCAAGT...AAGATATATACTGTGACAATCCACCACATCAGCCTGTGGCCATTGAACTATGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520632.5
ENST00000523337.5
CDS-3UTR GCA 90 bp CCTAGTCCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATTTTTCCAATATGACTTaGAGCATGATCTGCATGAAG +
Preference number: 4 (lower is better)
Translates to: PSPTATSQFCELLDIPFNFSNMT*SMICMK
Trigger: CTTCATGCAGATCATGCTGCAAGTCATATTGGAAAA...ATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGGACTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp TGTTGCTCTCAAGCAAGTGACAATGCCTTGTGCTTTTCCAATATGACTTGCAGCTTTTCCAATATGACTTaGAGCATGATCTGCATGAAG +
Preference number: 4 (lower is better)
Translates to: CCSQASDNALCFSNMTCSFSNMT*SMICMK
Trigger: CTTCATGCAGATCATGCTGCAAGTCATATTGGAAAA...GCTGCAAGTCATATTGGAAAAGCACAAGGCATTGTCACTTGCTTGAGAGCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
ENST00000523337.5
CDS-3UTR GCA 90 bp TGTGAAACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTCTGAGTGACAATGCCTTGTaGTTTTCCAATATGACTTGC +
Preference number: 4 (lower is better)
Translates to: CETPCSIQISMGRNTFLLSDNAL*FSNMTC
Trigger: GCAAGTCATATTGGAAAAGCACAAGGCATTGTCACT...CAGAAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGTTTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR GCA 90 bp CATACAAATATCCATGGGAAGGAACACCTTTCTTCTGCTCCCATGATATGGTGTAGTGACAATGCCTTGTaGTTTTCCAATATGACTTGC +
Preference number: 4 (lower is better)
Translates to: HTNIHGKEHLSSAPMIWCSDNAL*FSNMTC
Trigger: GCAAGTCATATTGGAAAAGCACAAGGCATTGTCACT...ACACCATATCATGGGAGCAGAAGAAAGGTGTTCCTTCCCATGGATATTTGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR GCA 90 bp CCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATAAATTCCCCATGATATGGTGTTaGTCTCAAGCAAGTGACAAT +
Preference number: 4 (lower is better)
Translates to: PTATSQFCELLDIPFNKFPMIWC*SQASDN
Trigger: ATTGTCACTTGCTTGAGAGCAACACCATATCATGGG...GAATTTATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp CCTAGTCCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATTCTTGTGAAACACCATaGAGCATACAAATATCCATG +
Preference number: 4 (lower is better)
Translates to: PSPTATSQFCELLDIPFNSCETP*SIQISM
Trigger: CATGGATATTTGTATGCTGCATGGTGTTTCACAAGA...ATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGGACTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp TGTTGCTCTCAAGCAAGTGACAATGCCTTGTGCTTTTCCAATATGACTTGCAGCTCTTGTGAAACACCATaGAGCATACAAATATCCATG +
Preference number: 4 (lower is better)
Translates to: CCSQASDNALCFSNMTCSSCETP*SIQISM
Trigger: CATGGATATTTGTATGCTGCATGGTGTTTCACAAGA...GCTGCAAGTCATATTGGAAAAGCACAAGGCATTGTCACTTGCTTGAGAGCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR GCA 90 bp CATATATTACATCTCTCACATTTTTATCTTGGTTCCTCCGTAGAAAGTCCTCTTCTGCCTCTGCTGGTGTaGAGACCTTCCATAGTTCAA +
Preference number: 4 (lower is better)
Translates to: HILHLSHFYLGSSVESPLLPLLV*RPSIVQ
Trigger: TTGAACTATGGAAGGTCTGCACACCAGCAGAGGCAG...AAGAGGACTTTCTACGGAGGAACCAAGATAAAAATGTGAGAGATGTAATATATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520757.1
CDS-3UTR CCA 90 bp CCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATAAATTCCAAAATGAGAATGGGTaGCTGCAACTTTCGTTGAGA +
Preference number: 4 (lower is better)
Translates to: PTATSQFCELLDIPFNKFQNENG*LQLSLR
Trigger: TCTCAACGAAAGTTGCAGCCACCCATTCTCATTTTG...GAATTTATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS-3UTR CCA 90 bp GCGACAAGAGTGAGACTTCTTTCATCGACGATTTTCATAAGCCATCTTTTAGTCCACAGGCTGATGTGGTaGATTGTCACAGTATATATC +
Preference number: 4 (lower is better)
Translates to: ATRVRLLSSTIFISHLLVHRLMW*IVTVYI
Trigger: GATATATACTGTGACAATCCACCACATCAGCCTGTG...GACTAAAAGATGGCTTATGAAAATCGTCGATGAAAGAAGTCTCACTCTTGTCGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518608.5
ENST00000520632.5
CDS-3UTR CCA 90 bp AAGCCATCTTTTAGTCAGATTATGTCTTTTAACAGCAGCTTCCCATCCACTTTTGGCCACAGGCTGATGTaGTGGATTGTCACAGTATAT +
Preference number: 4 (lower is better)
Translates to: KPSFSQIMSFNSSFPSTFGHRLM*WIVTVY
Trigger: ATATACTGTGACAATCCACCACATCAGCCTGTGGCC...AAAAGTGGATGGGAAGCTGCTGTTAAAAGACATAATCTGACTAAAAGATGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000517976.5
ENST00000520632.5
ENST00000520757.1
CDS-3UTR CCA 90 bp ATCAGTCCAATTGTTTTCTCAGAGACTGAGTCTTTAACTTTTCCATATGTGAAGCCTTCCATAGTTCAATaGCCACAGGCTGATGTGGTG +
Preference number: 4 (lower is better)
Translates to: ISPIVFSETESLTFPYVKPSIVQ*PQADVV
Trigger: CACCACATCAGCCTGTGGCCATTGAACTATGGAAGG...CTTCACATATGGAAAAGTTAAAGACTCAGTCTCTGAGAAAACAATTGGACTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518258.5
ENST00000523337.5
CDS-3UTR CCA 90 bp TATATTACATCTCTCACATTTTTATCTTGGTTCCTCCGTAGAAAGTCCTCTTGTCCTTCCATAGTTCAATaGCCACAGGCTGATGTGGTG +
Preference number: 4 (lower is better)
Translates to: YITSLTFLSWFLRRKSSCPSIVQ*PQADVV
Trigger: CACCACATCAGCCTGTGGCCATTGAACTATGGAAGG...ACAAGAGGACTTTCTACGGAGGAACCAAGATAAAAATGTGAGAGATGTAATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000454358.6
ENST00000518258.5
ENST00000520757.1
CDS-3UTR CCA 90 bp ATTCGCATCAGTCCAATTGTTTTCTCAGAGACTGAGTCTTTAACTTTTCCATATCCTTCCATAGTTCAATaGCCACAGGCTGATGTGGTG +
Preference number: 4 (lower is better)
Translates to: IRISPIVFSETESLTFPYPSIVQ*PQADVV
Trigger: CACCACATCAGCCTGTGGCCATTGAACTATGGAAGG...ATATGGAAAAGTTAAAGACTCAGTCTCTGAGAAAACAATTGGACTGATGCGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518258.5
ENST00000523337.5
CDS-3UTR CCA 90 bp GAAACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTCTGCTCGCAAGTGTGCTTGACTaGCAATGTCATATATTACAT +
Preference number: 4 (lower is better)
Translates to: ETPCSIQISMGRNTFLLLASVLD*QCHILH
Trigger: ATGTAATATATGACATTGCCAGTCAAGCACACTTGC...GAGCAGAAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR CCA 90 bp GAGACTGAGTCTTTAACTTTTCCATATGTGAAGTTACTTCCAAATATCCTGGTGGTGTTCAGATCCCAGTaGCATACAGTACAGCAAGAC +
Preference number: 4 (lower is better)
Translates to: ETESLTFPYVKLLPNILVVFRSQ*HTVQQD
Trigger: GTCTTGCTGTACTGTATGCCACTGGGATCTGAACAC...CACCAGGATATTTGGAAGTAACTTCACATATGGAAAAGTTAAAGACTCAGTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518258.5
ENST00000522683.5
ENST00000523337.5
CDS-3UTR CCA 90 bp GTTTTCAGCATAATTTTCCAGTTCCTTGATATTACGATATGCTTTGTCATCCAGTTCATTTTCCCAGGCTaGCTGGCTGTGCAAGACACA +
Preference number: 4 (lower is better)
Translates to: VFSIIFQFLDITICFVIQFIFPG*LAVQDT
Trigger: TGTGTCTTGCACAGCCAGCCAGCCTGGGAAAATGAA...CTGGATGACAAAGCATATCGTAATATCAAGGAACTGGAAAATTATGCTGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520757.1
CDS-3UTR CCA 90 bp CATATATTACATCTCTCACATTTTTATCTTGGTTCCTCCGTAGAAAGTCCTCTTTGTAGTTGCCCAGTCTaGCTCACACTAACATCGACC +
Preference number: 4 (lower is better)
Translates to: HILHLSHFYLGSSVESPLCSCPV*LTLTST
Trigger: GGTCGATGTTAGTGTGAGCCAGACTGGGCAACTACA...AAGAGGACTTTCTACGGAGGAACCAAGATAAAAATGTGAGAGATGTAATATATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520757.1
CDS-3UTR TCA 90 bp TGCATTCGCATCAGTCCAATTGTTTTCTCAGAGACTGAGTCTTTAACTTTTCCAAGGTGCAAGTGTGCTTaGCTGGCAATGTCATATATT +
Preference number: 4 (lower is better)
Translates to: CIRISPIVFSETESLTFPRCKCA*LAMSYI
Trigger: AATATATGACATTGCCAGTCAAGCACACTTGCACCT...TGGAAAAGTTAAAGACTCAGTCTCTGAGAAAACAATTGGACTGATGCGAATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518258.5
CDS-3UTR TCA 90 bp CAAAACTGCATTCGCATCAGTCCAATTGTTTTCTCAGAGACTGAGTCTTTAACTACAGGAACAGTTTTGTaGAAGGACCTAGCATGCTTT +
Preference number: 4 (lower is better)
Translates to: QNCIRISPIVFSETESLTTGTVL*KDLACF
Trigger: AAAGCATGCTAGGTCCTTTCACAAAACTGTTCCTGT...AGTTAAAGACTCAGTCTCTGAGAAAACAATTGGACTGATGCGAATGCAGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518258.5
CDS-3UTR TCA 90 bp TATCAAAATCCACTCGCTGAATTTTCTTTAGAAAGTCCTCTAGAGAAACCGTCTAAGAGTAATCCAGCCTaGGCCAGTTCCACATTAAAG +
Preference number: 4 (lower is better)
Translates to: YQNPLAEFSLESPLEKPSKSNPA*ASSTLK
Trigger: CTTTAATGTGGAACTGGCTCAGGCTGGATTACTCTT...AGACGGTTTCTCTAGAGGACTTTCTAAAGAAAATTCAGCGAGTGGATTTTGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518258.5
CDS-3UTR GCA 90 bp GACTTGCAGCATGATCTGCATGAAGATCCTTTATACCCAATATTTCTAGTGTTAATTAAAGGCCCTCAGTaGAAAAACAGAGCTTCGGGA +
Preference number: 4 (lower is better)
Translates to: DLQHDLHEDPLYPIFLVLIKGPQ*KNRASG
Trigger: TCCCGAAGCTCTGTTTTTGCACTGAGGGCCTTTAAT...TAACACTAGAAATATTGGGTATAAAGGATCTTCATGCAGATCATGCTGCAAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520632.5
ENST00000520757.1
ENST00000523337.5
CDS-3UTR GCA 90 bp AGTCCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATAAAACTTGCAGCATGATCTaGATGAAGATCCTTTATACC +
Preference number: 4 (lower is better)
Translates to: SPTATSQFCELLDIPFNKTCSMI*MKILYT
Trigger: GGTATAAAGGATCTTCATGCAGATCATGCTGCAAGT...TTTATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp TCTTGTGAAACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTACTTGCAGCATGATCTaGATGAAGATCCTTTATACC +
Preference number: 4 (lower is better)
Translates to: SCETPCSIQISMGRNTFLTCSMI*MKILYT
Trigger: GGTATAAAGGATCTTCATGCAGATCATGCTGCAAGT...AAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGTTTCACAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR GCA 90 bp TGTGAAACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTCTGTTTTCCAATATGACTTaGAGCATGATCTGCATGAAG +
Preference number: 4 (lower is better)
Translates to: CETPCSIQISMGRNTFLLFSNMT*SMICMK
Trigger: CTTCATGCAGATCATGCTGCAAGTCATATTGGAAAA...CAGAAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGTTTCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR GCA 90 bp CCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATAAATTCAGTGACAATGCCTTGTaGTTTTCCAATATGACTTGC +
Preference number: 4 (lower is better)
Translates to: PTATSQFCELLDIPFNKFSDNAL*FSNMTC
Trigger: GCAAGTCATATTGGAAAAGCACAAGGCATTGTCACT...GAATTTATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR GCA 90 bp GACTTGCAGCATGATCTGCATGAAGATCCTTTATACCCAATATTTCTAGTGTTAGGAACACCTTTCTTCTaGTCCCATGATATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: DLQHDLHEDPLYPIFLVLGTPFF*SHDMVL
Trigger: CAACACCATATCATGGGAGCAGAAGAAAGGTGTTCC...TAACACTAGAAATATTGGGTATAAAGGATCTTCATGCAGATCATGCTGCAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR CCA 90 bp CAAAATCCACTCGCTGAATTTTCTTTAGAAAGTCCTCTAGAGAAACCGTCTGAACACAGGCTGATGTGGTaGATTGTCACAGTATATATC +
Preference number: 4 (lower is better)
Translates to: QNPLAEFSLESPLEKPSEHRLMW*IVTVYI
Trigger: GATATATACTGTGACAATCCACCACATCAGCCTGTG...TTCAGACGGTTTCTCTAGAGGACTTTCTAAAGAAAATTCAGCGAGTGGATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
CDS-3UTR CCA 90 bp AATCCACTCGCTGAATTTTCTTTAGAAAGTCCTCTAGAGAAACCGTCTGAAGAACACAGGCTGATGTGGTaGATTGTCACAGTATATATC +
Preference number: 4 (lower is better)
Translates to: NPLAEFSLESPLEKPSEEHRLMW*IVTVYI
Trigger: GATATATACTGTGACAATCCACCACATCAGCCTGTG...TTCTTCAGACGGTTTCTCTAGAGGACTTTCTAAAGAAAATTCAGCGAGTGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
CDS-3UTR CCA 90 bp TTCCAAAACTGCATTCGCATCAGTCCAATTGTTTTCTCAGAGACTGAGTCTTTACACAGGCTGATGTGGTaGATTGTCACAGTATATATC +
Preference number: 4 (lower is better)
Translates to: FQNCIRISPIVFSETESLHRLMW*IVTVYI
Trigger: GATATATACTGTGACAATCCACCACATCAGCCTGTG...TAAAGACTCAGTCTCTGAGAAAACAATTGGACTGATGCGAATGCAGTTTTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518258.5
ENST00000522683.5
ENST00000523337.5
CDS-3UTR CCA 90 bp GTTTTCAGCATAATTTTCCAGTTCCTTGATATTACGATATGCTTTGTCATCCAGGGCCACAGGCTGATGTaGTGGATTGTCACAGTATAT +
Preference number: 4 (lower is better)
Translates to: VFSIIFQFLDITICFVIQGHRLM*WIVTVY
Trigger: ATATACTGTGACAATCCACCACATCAGCCTGTGGCC...CTGGATGACAAAGCATATCGTAATATCAAGGAACTGGAAAATTATGCTGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000518608.5
ENST00000520632.5
ENST00000520757.1
ENST00000523337.5
CDS-3UTR CCA 90 bp TTCCAATATGACTTGCAGCATGATCTGCATGAAGATCCTTTATACCCAATATTTGGCCACAGGCTGATGTaGTGGATTGTCACAGTATAT +
Preference number: 4 (lower is better)
Translates to: FQYDLQHDLHEDPLYPIFGHRLM*WIVTVY
Trigger: ATATACTGTGACAATCCACCACATCAGCCTGTGGCC...AAATATTGGGTATAAAGGATCTTCATGCAGATCATGCTGCAAGTCATATTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
ENST00000523337.5
CDS-3UTR CCA 90 bp ATATTACATCTCTCACATTTTTATCTTGGTTCCTCCGTAGAAAGTCCTCTTGTGTCTGCTCCCATGATATaGTGTTGCTCTCAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: ILHLSHFYLGSSVESPLVSAPMI*CCSQAS
Trigger: ACTTGCTTGAGAGCAACACCATATCATGGGAGCAGA...CACAAGAGGACTTTCTACGGAGGAACCAAGATAAAAATGTGAGAGATGTAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR CCA 90 bp AGTCCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATAAACTCACATTTTTATCTTaGTTCCTCCGTAGAAAGTCC +
Preference number: 4 (lower is better)
Translates to: SPTATSQFCELLDIPFNKLTFLS*FLRRKS
Trigger: GGACTTTCTACGGAGGAACCAAGATAAAAATGTGAG...TTTATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CCA 90 bp ATGATATGGTGTTGCTCTCAAGCAAGTGACAATGCCTTGTGCTTTTCCAATATGCTCACATTTTTATCTTaGTTCCTCCGTAGAAAGTCC +
Preference number: 4 (lower is better)
Translates to: MIWCCSQASDNALCFSNMLTFLS*FLRRKS
Trigger: GGACTTTCTACGGAGGAACCAAGATAAAAATGTGAG...CATATTGGAAAAGCACAAGGCATTGTCACTTGCTTGAGAGCAACACCATATCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR CCA 90 bp ATGGGTGGAATATATCAAAATCCACTCGCTGAATTTTCTTTAGAAAGTCCTCTAACTTCCATAGTTCAATaGCCACAGGCTGATGTGGTG +
Preference number: 4 (lower is better)
Translates to: MGGIYQNPLAEFSLESPLTSIVQ*PQADVV
Trigger: CACCACATCAGCCTGTGGCCATTGAACTATGGAAGT...TAGAGGACTTTCTAAAGAAAATTCAGCGAGTGGATTTTGATATATTCCACCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517976.5
CDS-3UTR CCA 90 bp ATTCGCATCAGTCCAATTGTTTTCTCAGAGACTGAGTCTTTAACTTTTCCATATGTGTTCAGATCCCAGTaGCATACAGTACAGCAAGAC +
Preference number: 4 (lower is better)
Translates to: IRISPIVFSETESLTFPYVFRSQ*HTVQQD
Trigger: GTCTTGCTGTACTGTATGCCACTGGGATCTGAACAC...ATATGGAAAAGTTAAAGACTCAGTCTCTGAGAAAACAATTGGACTGATGCGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518258.5
ENST00000522683.5
ENST00000523337.5
CDS-3UTR CCA 90 bp GTTTTCAGCATAATTTTCCAGTTCCTTGATATTACGATATGCTTTGTCATCCAGGTGTTCAGATCCCAGTaGCATACAGTACAGCAAGAC +
Preference number: 4 (lower is better)
Translates to: VFSIIFQFLDITICFVIQVFRSQ*HTVQQD
Trigger: GTCTTGCTGTACTGTATGCCACTGGGATCTGAACAC...CTGGATGACAAAGCATATCGTAATATCAAGGAACTGGAAAATTATGCTGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518258.5
ENST00000523337.5
CDS-3UTR CCA 90 bp TTCCAAAACTGCATTCGCATCAGTCCAATTGTTTTCTCAGAGACTGAGTCTTTATACTTCCAAATATCCTaGTGGTGGGTGGGTTTCTTA +
Preference number: 4 (lower is better)
Translates to: FQNCIRISPIVFSETESLYFQIS*WWVGFL
Trigger: TAAGAAACCCACCCACCACCAGGATATTTGGAAGTA...TAAAGACTCAGTCTCTGAGAAAACAATTGGACTGATGCGAATGCAGTTTTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518258.5
ENST00000522683.5
ENST00000523337.5
CDS-3UTR CCA 90 bp CATGCTTTAGGTGCAAGTGTGCTTGACTGGCAATGTCATATATTACATCTCTCAGGAACTGCCTCTTTCTaGTCAAAGGTTGATTTTTCT +
Preference number: 4 (lower is better)
Translates to: HALGASVLDWQCHILHLSGTASF*SKVDFS
Trigger: AGAAAAATCAACCTTTGACCAGAAAGAGGCAGTTCC...TGAGAGATGTAATATATGACATTGCCAGTCAAGCACACTTGCACCTAAAGCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520757.1
CDS-3UTR GCA 90 bp ATCAGTCCAATTGTTTTCTCAGAGACTGAGTCTTTAACTTTTCCATATGTGAAGATTAAAGGCCCTCAGTaGAAAAACAGAGCTTCGGGA +
Preference number: 4 (lower is better)
Translates to: ISPIVFSETESLTFPYVKIKGPQ*KNRASG
Trigger: TCCCGAAGCTCTGTTTTTGCACTGAGGGCCTTTAAT...CTTCACATATGGAAAAGTTAAAGACTCAGTCTCTGAGAAAACAATTGGACTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000518258.5
ENST00000522683.5
ENST00000523337.5
CDS-3UTR GCA 90 bp CAAAATCCACTCGCTGAATTTTCTTTAGAAAGTCCTCTAGAGAAACCGTCTGAAAGTGACAATGCCTTGTaGTTTTCCAATATGACTTGC +
Preference number: 4 (lower is better)
Translates to: QNPLAEFSLESPLEKPSESDNAL*FSNMTC
Trigger: GCAAGTCATATTGGAAAAGCACAAGGCATTGTCACT...TTCAGACGGTTTCTCTAGAGGACTTTCTAAAGAAAATTCAGCGAGTGGATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
CDS-3UTR GCA 90 bp TTAACTTTTCCATATGTGAAGTTACTTCCAAATATCCTGGTGGTGGGTGGGTTTAGTGACAATGCCTTGTaGTTTTCCAATATGACTTGC +
Preference number: 4 (lower is better)
Translates to: LTFPYVKLLPNILVVGGFSDNAL*FSNMTC
Trigger: GCAAGTCATATTGGAAAAGCACAAGGCATTGTCACT...AAACCCACCCACCACCAGGATATTTGGAAGTAACTTCACATATGGAAAAGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518258.5
ENST00000523337.5
CDS-3UTR GCA 90 bp TCCATAGTTCAATGGCCACAGGCTGATGTGGTGGATTGTCACAGTATATATCTTAGTAATGTATTCTTCTaGTGTAAAGATGGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: SIVQWPQADVVDCHSIYLSNVFF*CKDGWN
Trigger: ATTCCACCCATCTTTACAGCAGAAGAATACATTACT...AAGATATATACTGTGACAATCCACCACATCAGCCTGTGGCCATTGAACTATGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
CDS-3UTR CCA 90 bp GACTTGCAGCATGATCTGCATGAAGATCCTTTATACCCAATATTTCTAGTGTTACACAGGCTGATGTGGTaGATTGTCACAGTATATATC +
Preference number: 4 (lower is better)
Translates to: DLQHDLHEDPLYPIFLVLHRLMW*IVTVYI
Trigger: GATATATACTGTGACAATCCACCACATCAGCCTGTG...TAACACTAGAAATATTGGGTATAAAGGATCTTCATGCAGATCATGCTGCAAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520632.5
ENST00000520757.1
ENST00000523337.5
CDS-3UTR CCA 90 bp CCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATAAATTCGCAAGTGTGCTTGACTaGCAATGTCATATATTACAT +
Preference number: 4 (lower is better)
Translates to: PTATSQFCELLDIPFNKFASVLD*QCHILH
Trigger: ATGTAATATATGACATTGCCAGTCAAGCACACTTGC...GAATTTATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CCA 90 bp TCTTGTGAAACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTGCAAGTGTGCTTGACTaGCAATGTCATATATTACAT +
Preference number: 4 (lower is better)
Translates to: SCETPCSIQISMGRNTFLASVLD*QCHILH
Trigger: ATGTAATATATGACATTGCCAGTCAAGCACACTTGC...AAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGTTTCACAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR CCA 90 bp GTTTTCAGCATAATTTTCCAGTTCCTTGATATTACGATATGCTTTGTCATCCAGGCTTTCCATCTTTACTaGGGCTCTGTGAAGTCAATC +
Preference number: 4 (lower is better)
Translates to: VFSIIFQFLDITICFVIQAFHLY*GSVKSI
Trigger: GATTGACTTCACAGAGCCCCAGTAAAGATGGAAAGC...CTGGATGACAAAGCATATCGTAATATCAAGGAACTGGAAAATTATGCTGAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000517976.5
ENST00000520632.5
ENST00000520757.1
CDS-3UTR CCA 90 bp GTTTTCAGCATAATTTTCCAGTTCCTTGATATTACGATATGCTTTGTCATCCAGTTCCAAATATCCTGGTaGTGGGTGGGTTTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: VFSIIFQFLDITICFVIQFQISW*WVGFLA
Trigger: TGCTAAGAAACCCACCCACCACCAGGATATTTGGAA...CTGGATGACAAAGCATATCGTAATATCAAGGAACTGGAAAATTATGCTGAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518258.5
ENST00000523337.5
CDS-3UTR CCA 90 bp GAGACTGAGTCTTTAACTTTTCCATATGTGAAGTTACTTCCAAATATCCTGGTGTACTTCCAAATATCCTaGTGGTGGGTGGGTTTCTTA +
Preference number: 4 (lower is better)
Translates to: ETESLTFPYVKLLPNILVYFQIS*WWVGFL
Trigger: TAAGAAACCCACCCACCACCAGGATATTTGGAAGTA...CACCAGGATATTTGGAAGTAACTTCACATATGGAAAAGTTAAAGACTCAGTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518258.5
ENST00000522683.5
ENST00000523337.5
CDS-3UTR TCA 90 bp GTTTTCAGCATAATTTTCCAGTTCCTTGATATTACGATATGCTTTGTCATCCAGAGGTGCAAGTGTGCTTaGCTGGCAATGTCATATATT +
Preference number: 4 (lower is better)
Translates to: VFSIIFQFLDITICFVIQRCKCA*LAMSYI
Trigger: AATATATGACATTGCCAGTCAAGCACACTTGCACCT...CTGGATGACAAAGCATATCGTAATATCAAGGAACTGGAAAATTATGCTGAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR TCA 90 bp ATGGGTGGAATATATCAAAATCCACTCGCTGAATTTTCTTTAGAAAGTCCTCTAACAGGAACAGTTTTGTaGAAGGACCTAGCATGCTTT +
Preference number: 4 (lower is better)
Translates to: MGGIYQNPLAEFSLESPLTGTVL*KDLACF
Trigger: AAAGCATGCTAGGTCCTTTCACAAAACTGTTCCTGT...TAGAGGACTTTCTAAAGAAAATTCAGCGAGTGGATTTTGATATATTCCACCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
CDS-3UTR TCA 90 bp CAAAATCCACTCGCTGAATTTTCTTTAGAAAGTCCTCTAGAGAAACCGTCTGAATCAAAATCCACTCGCTaGATTTTCTTTAGAAAGTCC +
Preference number: 4 (lower is better)
Translates to: QNPLAEFSLESPLEKPSESKSTR*IFFRKS
Trigger: GGACTTTCTAAAGAAAATTCAGCGAGTGGATTTTGA...TTCAGACGGTTTCTCTAGAGGACTTTCTAAAGAAAATTCAGCGAGTGGATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
CDS-3UTR TCA 90 bp AAGCCATCTTTTAGTCAGATTATGTCTTTTAACAGCAGCTTCCCATCCACTTTTTCCTTAATTTCCGTCTaGAGAAAAGCAGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: KPSFSQIMSFNSSFPSTFSLISV*RKAGNA
Trigger: AGCATTTCCTGCTTTTCTTCAGACGGAAATTAAGGA...AAAAGTGGATGGGAAGCTGCTGTTAAAAGACATAATCTGACTAAAAGATGGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000520757.1
CDS-3UTR GCA 90 bp AAGCCATCTTTTAGTCAGATTATGTCTTTTAACAGCAGCTTCCCATCCACTTTTACTTGCAGCATGATCTaGATGAAGATCCTTTATACC +
Preference number: 4 (lower is better)
Translates to: KPSFSQIMSFNSSFPSTFTCSMI*MKILYT
Trigger: GGTATAAAGGATCTTCATGCAGATCATGCTGCAAGT...AAAAGTGGATGGGAAGCTGCTGTTAAAAGACATAATCTGACTAAAAGATGGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000517976.5
ENST00000520632.5
ENST00000520757.1
CDS-3UTR GCA 90 bp TATATTACATCTCTCACATTTTTATCTTGGTTCCTCCGTAGAAAGTCCTCTTGTCCCATGATATGGTGTTaGTCTCAAGCAAGTGACAAT +
Preference number: 4 (lower is better)
Translates to: YITSLTFLSWFLRRKSSCPMIWC*SQASDN
Trigger: ATTGTCACTTGCTTGAGAGCAACACCATATCATGGG...ACAAGAGGACTTTCTACGGAGGAACCAAGATAAAAATGTGAGAGATGTAATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR GCA 90 bp TTCCAATATGACTTGCAGCATGATCTGCATGAAGATCCTTTATACCCAATATTTCCCATGATATGGTGTTaGTCTCAAGCAAGTGACAAT +
Preference number: 4 (lower is better)
Translates to: FQYDLQHDLHEDPLYPIFPMIWC*SQASDN
Trigger: ATTGTCACTTGCTTGAGAGCAACACCATATCATGGG...AAATATTGGGTATAAAGGATCTTCATGCAGATCATGCTGCAAGTCATATTGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
ENST00000523337.5
CDS-3UTR GCA 90 bp TCTTGTGAAACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTAGTAATGTATTCTTCTaGTGTAAAGATGGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: SCETPCSIQISMGRNTFLSNVFF*CKDGWN
Trigger: ATTCCACCCATCTTTACAGCAGAAGAATACATTACT...AAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGTTTCACAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
CDS-3UTR GCA 90 bp CAATATGACTTGCAGCATGATCTGCATGAAGATCCTTTATACCCAATATTTCTAACTTGCAGCATGATCTaGATGAAGATCCTTTATACC +
Preference number: 4 (lower is better)
Translates to: QYDLQHDLHEDPLYPIFLTCSMI*MKILYT
Trigger: GGTATAAAGGATCTTCATGCAGATCATGCTGCAAGT...TAGAAATATTGGGTATAAAGGATCTTCATGCAGATCATGCTGCAAGTCATATTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520632.5
ENST00000520757.1
ENST00000523337.5
CDS-3UTR GCA 90 bp ATTCGCATCAGTCCAATTGTTTTCTCAGAGACTGAGTCTTTAACTTTTCCATATACTTGCAGCATGATCTaGATGAAGATCCTTTATACC +
Preference number: 4 (lower is better)
Translates to: IRISPIVFSETESLTFPYTCSMI*MKILYT
Trigger: GGTATAAAGGATCTTCATGCAGATCATGCTGCAAGT...ATATGGAAAAGTTAAAGACTCAGTCTCTGAGAAAACAATTGGACTGATGCGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518258.5
ENST00000523337.5
CDS-3UTR GCA 90 bp AAGCCATCTTTTAGTCAGATTATGTCTTTTAACAGCAGCTTCCCATCCACTTTTTCTTGTGAAACACCATaGAGCATACAAATATCCATG +
Preference number: 4 (lower is better)
Translates to: KPSFSQIMSFNSSFPSTFSCETP*SIQISM
Trigger: CATGGATATTTGTATGCTGCATGGTGTTTCACAAGA...AAAAGTGGATGGGAAGCTGCTGTTAAAAGACATAATCTGACTAAAAGATGGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517976.5
ENST00000520757.1
CDS-3UTR CCA 90 bp AAGCCATCTTTTAGTCAGATTATGTCTTTTAACAGCAGCTTCCCATCCACTTTTGCAAGTGTGCTTGACTaGCAATGTCATATATTACAT +
Preference number: 4 (lower is better)
Translates to: KPSFSQIMSFNSSFPSTFASVLD*QCHILH
Trigger: ATGTAATATATGACATTGCCAGTCAAGCACACTTGC...AAAAGTGGATGGGAAGCTGCTGTTAAAAGACATAATCTGACTAAAAGATGGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000517976.5
ENST00000520757.1
CDS-3UTR TCA 90 bp CATATATTACATCTCTCACATTTTTATCTTGGTTCCTCCGTAGAAAGTCCTCTTTCAAAATCCACTCGCTaGATTTTCTTTAGAAAGTCC +
Preference number: 4 (lower is better)
Translates to: HILHLSHFYLGSSVESPLSKSTR*IFFRKS
Trigger: GGACTTTCTAAAGAAAATTCAGCGAGTGGATTTTGA...AAGAGGACTTTCTACGGAGGAACCAAGATAAAAATGTGAGAGATGTAATATATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
CDS-3UTR GCA 90 bp ATTCGCATCAGTCCAATTGTTTTCTCAGAGACTGAGTCTTTAACTTTTCCATATTTTTCCAATATGACTTaGAGCATGATCTGCATGAAG +
Preference number: 4 (lower is better)
Translates to: IRISPIVFSETESLTFPYFSNMT*SMICMK
Trigger: CTTCATGCAGATCATGCTGCAAGTCATATTGGAAAA...ATATGGAAAAGTTAAAGACTCAGTCTCTGAGAAAACAATTGGACTGATGCGAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000518258.5
ENST00000523337.5
CDS-3UTR GCA 90 bp TATATTACATCTCTCACATTTTTATCTTGGTTCCTCCGTAGAAAGTCCTCTTGTTCTTGTGAAACACCATaGAGCATACAAATATCCATG +
Preference number: 4 (lower is better)
Translates to: YITSLTFLSWFLRRKSSCSCETP*SIQISM
Trigger: CATGGATATTTGTATGCTGCATGGTGTTTCACAAGA...ACAAGAGGACTTTCTACGGAGGAACCAAGATAAAAATGTGAGAGATGTAATATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR GCA 90 bp CAATATGACTTGCAGCATGATCTGCATGAAGATCCTTTATACCCAATATTTCTAAGTAATGTATTCTTCTaGTGTAAAGATGGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: QYDLQHDLHEDPLYPIFLSNVFF*CKDGWN
Trigger: ATTCCACCCATCTTTACAGCAGAAGAATACATTACT...TAGAAATATTGGGTATAAAGGATCTTCATGCAGATCATGCTGCAAGTCATATTG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
CDS GCA 90 bp CAGCCACGCTCCGCCCAGACACCTCCGGCCCGGGCAGCCGCCGCATaGGCGCGTACAGACCCAGAGGCGGCCGGCGGCAGCACAGGCCGG +
Preference number: 5 (lower is better)
Translates to: QPRSAQTPPARAAAA*ARTDPEAAGGSTGR
Trigger: CCGGCCTGTGCTGCCGCCGGCCGCCTCTGGGTCTGTACGCGCGCATGCGGCGGCTGCCCGGGCCGGAGGTGTCTGGGCGGAGCGTGGCTG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396124.9
ENST00000517976.5
ENST00000518258.5
ENST00000520632.5
ENST00000523337.5
CDS CCA 90 bp CCTTCCCTGGGCGCGCCGCGCAAGGCCGGCGGAGCGGGCTCCGGGTaGTCGCGGACCGGGACTGGGGAGAGCAGAGCCGCACTTGGCCAG +
Preference number: 5 (lower is better)
Translates to: PSLGAPRKAGGAGSG*SRTGTGESRAALGQ
Trigger: CTGGCCAAGTGCGGCTCTGCTCTCCCCAGTCCCGGTCCGCGACCACCCGGAGCCCGCTCCGCCGGCCTTGCGCGGCGCGCCCAGGGAAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396113.5
ENST00000523378.5
CDS GCA 90 bp GCGCGTACAGACCCAGAGGCGGCCGGCGGCAGCACAGGCCGGGGATaGCAAGCCGCAACGGCCCCCAGACAGAGCCGTGCGCGGAGGCCG +
Preference number: 5 (lower is better)
Translates to: ARTDPEAAGGSTGRG*QAATAPRQSRARRP
Trigger: CGGCCTCCGCGCACGGCTCTGTCTGGGGGCCGTTGCGGCTTGGCATCCCCGGCCTGTGCTGCCGCCGGCCGCCTCTGGGTCTGTACGCGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396124.9
ENST00000518258.5
ENST00000523337.5
CDS CCA 90 bp GCAGCTCCAGGCAGTAGTGGTCAGTGCCCCAGGCGCCCGGTCCGCTaGCCGCAGCCACGCTCCGCCCAGACACCTCCGGCCCGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: AAPGSSGQCPRRPVR*PQPRSAQTPPARAA
Trigger: GGCTGCCCGGGCCGGAGGTGTCTGGGCGGAGCGTGGCTGCGGCCAGCGGACCGGGCGCCTGGGGCACTGACCACTACTGCCTGGAGCTGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000396124.9
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000518608.5
ENST00000520632.5
ENST00000520757.1
ENST00000522683.5
ENST00000523337.5
CDS GCA 90 bp ATGTCAGAAAGGCCGAAGAAGAGACCTGGGTGGGCGGGCTGGAAATaGCTTCCCTGGGCGCGCCGCGCAAGGCCGGCGGAGCGGGCTCCG +
Preference number: 5 (lower is better)
Translates to: MSERPKKRPGWAGWK*LPWARRARPAERAP
Trigger: CGGAGCCCGCTCCGCCGGCCTTGCGCGGCGCGCCCAGGGAAGGCATTTCCAGCCCGCCCACCCAGGTCTCTTCTTCGGCCTTTCTGACAT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519136.5
ENST00000523378.5
CDS CCA 90 bp GGCACCATGTCAGAAAGGCCGAAGAAGAGACCTGGGTGGGCGGGCTaGAAATGCCTTCCCTGGGCGCGCCGCGCAAGGCCGGCGGAGCGG +
Preference number: 5 (lower is better)
Translates to: GTMSERPKKRPGWAG*KCLPWARRARPAER
Trigger: CCGCTCCGCCGGCCTTGCGCGGCGCGCCCAGGGAAGGCATTTCCAGCCCGCCCACCCAGGTCTCTTCTTCGGCCTTTCTGACATGGTGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519136.5
ENST00000523378.5
CDS GCA 90 bp CTTCATAATCCCGTTTCCGCAGCAGCTCCAGGCAGTAGTGGTCAGTaGCCCAGGCGCCCGGTCCGCTGGCCGCAGCCACGCTCCGCCCAG +
Preference number: 5 (lower is better)
Translates to: LHNPVSAAAPGSSGQ*PRRPVRWPQPRSAQ
Trigger: CTGGGCGGAGCGTGGCTGCGGCCAGCGGACCGGGCGCCTGGGGCACTGACCACTACTGCCTGGAGCTGCTGCGGAAACGGGATTATGAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396124.9
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520632.5
ENST00000520757.1
ENST00000522683.5
ENST00000523337.5
CDS GCA 90 bp GAGACTGAGTCTTTAACCGCAGCAGCTCCAGGCAGTAGTGGTCAGTaGCCCAGGCGCCCGGTCCGCTGGCCGCAGCCACGCTCCGCCCAG +
Preference number: 5 (lower is better)
Translates to: ETESLTAAAPGSSGQ*PRRPVRWPQPRSAQ
Trigger: CTGGGCGGAGCGTGGCTGCGGCCAGCGGACCGGGCGCCTGGGGCACTGACCACTACTGCCTGGAGCTGCTGCGGTTAAAGACTCAGTCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518608.5
CDS CCA 90 bp AGTAGGGCTGGCACCATGTCAGAAAGGCCGAAGAAGAGACCTGGGTaGGCGGGCTGGAAATGCCTTCCCTGGGCGCGCCGCGCAAGGCCG +
Preference number: 5 (lower is better)
Translates to: SRAGTMSERPKKRPG*AGWKCLPWARRARP
Trigger: CGGCCTTGCGCGGCGCGCCCAGGGAAGGCATTTCCAGCCCGCCCACCCAGGTCTCTTCTTCGGCCTTTCTGACATGGTGCCAGCCCTACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519136.5
ENST00000523378.5
CDS CCA 90 bp CTCCGGGTGGTCGCGGACCGGGACTGGGGAGAGCAGAGCCGCACTTaGCCAGGCGCGTGGCTGAGTGGTGTTTACATTCTGCAGCCACTC +
Preference number: 5 (lower is better)
Translates to: LRVVADRDWGEQSRT*PGAWLSGVYILQPL
Trigger: GAGTGGCTGCAGAATGTAAACACCACTCAGCCACGCGCCTGGCCAAGTGCGGCTCTGCTCTCCCCAGTCCCGGTCCGCGACCACCCGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523378.5
CDS-3UTR CAA 90 bp TCCAGGGACAGCACAGCAGACACTGTCTGGGCCAGGGGTGCCAATGGCAGTGCCACTGACCACCATCTGTaGTGCTGGACTCCTGCTGAC +
Preference number: 5 (lower is better)
Translates to: SRDSTADTVWARGANGSATDHHL*CWTPAD
Trigger: GTCAGCAGGAGTCCAGCACAACAGATGGTGGTCAGT...GGCACTGCCATTGGCACCCCTGGCCCAGACAGTGTCTGCTGTGCTGTCCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396111.6
ENST00000396113.5
CDS-3UTR CAA 90 bp TGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCTTGGCACACCAATATTCCCTGTaGGAGCTCCAGCTTCCAGGG +
Preference number: 5 (lower is better)
Translates to: WARGANGSASARISAVLAHQYSL*ELQLPG
Trigger: CCCTGGAAGCTGGAGCTCCAACAGGGAATATTGGTG...TGCCAAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS GCA 90 bp CAGAGGGTGGAGCTCCAGACACTTCATGGGTTGTTGAGAGGTGGCTaGCTGCAACTTTCGTTGAGAGTACATGGGGAGGGGCCTTGGCAG +
Preference number: 5 (lower is better)
Translates to: QRVELQTLHGLLRGG*LQLSLRVHGEGPWQ
Trigger: CTGCCAAGGCCCCTCCCCATGTACTCTCAACGAAAGTTGCAGGCAGCCACCTCTCAACAACCCATGAAGTGTCTGGAGCTCCACCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521587.1
CDS CCA 90 bp AAGAGACCTCCATGTAGAACCAGCCCAGTTGAGAGCCTCCATCCCTaGGCAGGAGCCAAGGTCAACAGTAGCAGTGACTGGGCAGGGACA +
Preference number: 5 (lower is better)
Translates to: KRPPCRTSPVESLHP*AGAKVNSSSDWAGT
Trigger: TGTCCCTGCCCAGTCACTGCTACTGTTGACCTTGGCTCCTGCCCAGGGATGGAGGCTCTCAACTGGGCTGGTTCTACATGGAGGTCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS CCA 90 bp CGAACTGCCTGTGCCGAAGTCACCACTGACCACCATCTGTTGTGCTaGACTCCTGCTGACTCCAGTAGGGCTGGCACCATGTCAGAAAGG +
Preference number: 5 (lower is better)
Translates to: RTACAEVTTDHHLLC*TPADSSRAGTMSER
Trigger: CCTTTCTGACATGGTGCCAGCCCTACTGGAGTCAGCAGGAGTCCAGCACAACAGATGGTGGTCAGTGGTGACTTCGGCACAGGCAGTTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000519136.5
ENST00000523378.5
CDS-3UTR CAA 90 bp TGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCTTGGCAACACTTCATGGGTTGTaGAGAGGTGGCTCCAGTCTC +
Preference number: 5 (lower is better)
Translates to: WARGANGSASARISAVLATLHGL*RGGSSL
Trigger: GAGACTGGAGCCACCTCTCAACAACCCATGAAGTGT...TGCCAAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396111.6
CDS GCA 90 bp TCACGAACTGCCTGTGCCGAAGTCACCACTGACCACCATCTGTTGTaGTGGACTCCTGCTGACTCCAGTAGGGCTGGCACCATGTCAGAA +
Preference number: 5 (lower is better)
Translates to: SRTACAEVTTDHHLL*WTPADSSRAGTMSE
Trigger: TTCTGACATGGTGCCAGCCCTACTGGAGTCAGCAGGAGTCCAGCACAACAGATGGTGGTCAGTGGTGACTTCGGCACAGGCAGTTCGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000519136.5
ENST00000523378.5
CDS-3UTR CAA 90 bp CTGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCTTGGCGCAAGTGACAATGCCTaGTGCTTTTCCAATATGACT +
Preference number: 5 (lower is better)
Translates to: LGQGCQWQCLCQNLSSLGASDNA*CFSNMT
Trigger: AGTCATATTGGAAAAGCACAAGGCATTGTCACTTGC...GCCAAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CAA 90 bp CACCAATATTCCCTGTTGGAGCTCCAGCTTCCAGGGACAGCACAGCAGACACTGCAGACACTTCATGGGTaGTTGAGAGGTGGCTCCAGT +
Preference number: 5 (lower is better)
Translates to: HQYSLLELQLPGTAQQTLQTLHG*LRGGSS
Trigger: ACTGGAGCCACCTCTCAACAACCCATGAAGTGTCTG...CAGTGTCTGCTGTGCTGTCCCTGGAAGCTGGAGCTCCAACAGGGAATATTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396111.6
CDS GCA 90 bp GAGTCTTTAACCAGCCTGAGCCAGTTCCACATTAAAGGCCCTCAGTaGAAAAACAGAGCTTCGGGATTCTGCAGGGAGCAGCAGGGAGCA +
Preference number: 5 (lower is better)
Translates to: ESLTSLSQFHIKGPQ*KNRASGFCREQQGA
Trigger: TGCTCCCTGCTGCTCCCTGCAGAATCCCGAAGCTCTGTTTTTGCACTGAGGGCCTTTAATGTGGAACTGGCTCAGGCTGGTTAAAGACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000454358.6
ENST00000517976.5
ENST00000520632.5
ENST00000523378.5
CDS-3UTR CAA 90 bp GTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGCTCCAGCTACTGACCACCATCTGTaGTGCTGGACTCCTGCTGAC +
Preference number: 5 (lower is better)
Translates to: VAYGLCTATPIFPVGAPATDHHL*CWTPAD
Trigger: GTCAGCAGGAGTCCAGCACAACAGATGGTGGTCAGT...AGCTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396111.6
ENST00000396113.5
CDS-3UTR CAA 90 bp GTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGCTCCAGCTACACTTCATGGGTTGTaGAGAGGTGGCTGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: VAYGLCTATPIFPVGAPATLHGL*RGGCLC
Trigger: GCAGAGGCAGCCACCTCTCAACAACCCATGAAGTGT...AGCTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS-3UTR CAA 90 bp GTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGCTCCAGCTCAGACACTTCATGGGTaGTTGAGAGGTGGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: VAYGLCTATPIFPVGAPAQTLHG*LRGGCL
Trigger: GAGGCAGCCACCTCTCAACAACCCATGAAGTGTCTG...AGCTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS-3UTR CAA 90 bp TGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCTTGGCAGCAAGTGACAATGCCTaGTGCTTTTCCAATATGACT +
Preference number: 5 (lower is better)
Translates to: WARGANGSASARISAVLAASDNA*CFSNMT
Trigger: AGTCATATTGGAAAAGCACAAGGCATTGTCACTTGC...TGCCAAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CAA 90 bp GTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGCTCCAGCTCACCAATATTCCCTGTaGGAGCTCCAGCTTCCAGGG +
Preference number: 5 (lower is better)
Translates to: VAYGLCTATPIFPVGAPAHQYSL*ELQLPG
Trigger: CCCTGGAAGCTGGAGCTCCAACAGGGAATATTGGTG...AGCTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS CCA 90 bp GGTGGCTGCCTGCAACTTTCGTTGAGAGTACATGGGGAGGGGCCTTaGCAGGAGCAGTTCAGTAGACATCTCACCATACCATTATCTCTT +
Preference number: 5 (lower is better)
Translates to: GGCLQLSLRVHGEGP*QEQFSRHLTIPLSL
Trigger: AAGAGATAATGGTATGGTGAGATGTCTACTGAACTGCTCCTGCCAAGGCCCCTCCCCATGTACTCTCAACGAAAGTTGCAGGCAGCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521587.1
CDS-3UTR CAA 90 bp TGGCTCAAGTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGTGGCTGCAACTTTCGTaGAGAGTACATGGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: WLKCGLWPMHSYTNIPCWWLQLS*RVHGEG
Trigger: CCCCTCCCCATGTACTCTCAACGAAAGTTGCAGCCA...CCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS-3UTR CAA 90 bp TGGGCCAGGGGTGCCAATGGCAGTGCCTCTGCCAGAATCTCAGCAGTCTTGGCACTTTTCCAATATGACTaGCAGCATGATCTGCATGAA +
Preference number: 5 (lower is better)
Translates to: WARGANGSASARISAVLALFQYD*QHDLHE
Trigger: TTCATGCAGATCATGCTGCAAGTCATATTGGAAAAG...TGCCAAGACTGCTGAGATTCTGGCAGAGGCACTGCCATTGGCACCCCTGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CAA 90 bp TGGCTCAAGTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGCACCAATATTCCCTGTaGGAGCTCCAGCTTCCAGGG +
Preference number: 5 (lower is better)
Translates to: WLKCGLWPMHSYTNIPCWHQYSL*ELQLPG
Trigger: CCCTGGAAGCTGGAGCTCCAACAGGGAATATTGGTG...CCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CAA 90 bp GTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGCTCCAGCTAGCCCCTATGATAACTaGAGCCCTTTCCCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: VAYGLCTATPIFPVGAPASPYDN*SPFPFP
Trigger: AGGAAAGGGGAAAGGGCTCAAGTTATCATAGGGGCT...AGCTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS CCA 90 bp AATGGGTGGCTGCAACTTTCGTTGAGAGTACATGGGGAGGGGCCTTaGCAGGAGCAGTTCAGTAGACATCTCACCATACCATTATCTCTT +
Preference number: 5 (lower is better)
Translates to: NGWLQLSLRVHGEGP*QEQFSRHLTIPLSL
Trigger: AAGAGATAATGGTATGGTGAGATGTCTACTGAACTGCTCCTGCCAAGGCCCCTCCCCATGTACTCTCAACGAAAGTTGCAGCCACCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS TCA 90 bp CAGTGGCATACAGTACAGCAAGACAGCAGCAAGAGTAATCCAGCCTaGGCCAGTTCCACATTAAAGGCCCTCAGTGCAAAAACAGAGCTT +
Preference number: 5 (lower is better)
Translates to: QWHTVQQDSSKSNPA*ASSTLKALSAKTEL
Trigger: AAGCTCTGTTTTTGCACTGAGGGCCTTTAATGTGGAACTGGCTCAGGCTGGATTACTCTTGCTGCTGTCTTGCTGTACTGTATGCCACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000518258.5
ENST00000519136.5
ENST00000522683.5
ENST00000523337.5
CDS TCA 90 bp GTGCGTTCCTCTGAGTATGTGCAAGAGAGCTCCAACCAGTGTGGCTaGGTCAACTGGAGAAAGTTTCAAGGACATCTTGTCGTCATAAGG +
Preference number: 5 (lower is better)
Translates to: VRSSEYVQESSNQCG*VNWRKFQGHLVVIR
Trigger: CCTTATGACGACAAGATGTCCTTGAAACTTTCTCCAGTTGACTCAGCCACACTGGTTGGAGCTCTCTTGCACATACTCAGAGGAACGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523184.5
CDS TCA 90 bp AAGCTGCGTAAAGACCCTCATCCGAGGTCTGACAGCTCGCGTATGTaGAATACGTGGCTAGAAAAGCCTCGACTGAGTCAAAGTTATGCT +
Preference number: 5 (lower is better)
Translates to: KLRKDPHPRSDSSRM*NTWLEKPRLSQSYA
Trigger: AGCATAACTTTGACTCAGTCGAGGCTTTTCTAGCCACGTATTTCACATACGCGAGCTGTCAGACCTCGGATGAGGGTCTTTACGCAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523184.5
CDS-3UTR CAA 90 bp AGAAGAGGTGTACCACTGTCAGGTCTGTGGGTGGCTCCTGTTACAGAAACCCTCTTCGCATCAGTCCAATaGTTTTCTCAGAGACTGAGT +
Preference number: 5 (lower is better)
Translates to: RRGVPLSGLWVAPVTETLFASVQ*FSQRLS
Trigger: ACTCAGTCTCTGAGAAAACAATTGGACTGATGCGAA...GAGGGTTTCTGTAACAGGAGCCACCCACAGACCTGACAGTGGTACACCTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517976.5
ENST00000522683.5
CDS-3UTR CAA 90 bp TGGCTGTGCAAGACACACGCCCTGAGTGTCTGCATCCTTAATTTCCGTCTGAAGAACATCGACCTGTGTTaGTCAAAGATTCTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: WLCKTHALSVCILNFRLKNIDLC*SKILLW
Trigger: CCAGAGGAGAATCTTTGACAAACACAGGTCGATGTT...CTTCAGACGGAAATTAAGGATGCAGACACTCAGGGCGTGTGTCTTGCACAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520757.1
CDS-3UTR CAA 90 bp GTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGCTCCAGCTTTCGCATCAGTCCAATaGTTTTCTCAGAGACTGAGT +
Preference number: 5 (lower is better)
Translates to: VAYGLCTATPIFPVGAPAFASVQ*FSQRLS
Trigger: ACTCAGTCTCTGAGAAAACAATTGGACTGATGCGAA...AGCTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CAA 90 bp GTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGCTCCAGGCAAGTGACAATGCCTaGTGCTTTTCCAATATGACT +
Preference number: 5 (lower is better)
Translates to: VWLMAYAQLHQYSLLELQASDNA*CFSNMT
Trigger: AGTCATATTGGAAAAGCACAAGGCATTGTCACTTGC...CTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CAA 90 bp TGGCTCAAGTGTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGTTCGCATCAGTCCAATaGTTTTCTCAGAGACTGAGT +
Preference number: 5 (lower is better)
Translates to: WLKCGLWPMHSYTNIPCWFASVQ*FSQRLS
Trigger: ACTCAGTCTCTGAGAAAACAATTGGACTGATGCGAA...CCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCACACTTGAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CAA 90 bp GTGGCTTATGGCCTATGCACAGCTACACCAATATTCCCTGTTGGAGCTCCAGCTCTTTTCCAATATGACTaGCAGCATGATCTGCATGAA +
Preference number: 5 (lower is better)
Translates to: VAYGLCTATPIFPVGAPALFQYD*QHDLHE
Trigger: TTCATGCAGATCATGCTGCAAGTCATATTGGAAAAG...AGCTGGAGCTCCAACAGGGAATATTGGTGTAGCTGTGCATAGGCCATAAGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CAA 90 bp CCTAGTCCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATAGCCCCTATGATAACTaGAGCCCTTTCCCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: PSPTATSQFCELLDIPFNSPYDN*SPFPFP
Trigger: AGGAAAGGGGAAAGGGCTCAAGTTATCATAGGGGCT...ATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGGACTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS CCA 90 bp CTGAGTCAAAGTTATGCTTCTAACTTCCTGATGCAGTCGTTTGAATaGAGAAGTGTGCGTTCCTCTGAGTATGTGCAAGAGAGCTCCAAC +
Preference number: 5 (lower is better)
Translates to: LSQSYASNFLMQSFE*RSVRSSEYVQESSN
Trigger: GTTGGAGCTCTCTTGCACATACTCAGAGGAACGCACACTTCTCCATTCAAACGACTGCATCAGGAAGTTAGAAGCATAACTTTGACTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523184.5
CDS-3UTR CAA 90 bp CCTAGTCCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATTCTGGCCAATTAGACTaGAGAACAAGTCCACTGTGG +
Preference number: 5 (lower is better)
Translates to: PSPTATSQFCELLDIPFNSGQLD*RTSPLW
Trigger: CCACAGTGGACTTGTTCTCAAGTCTAATTGGCCAGA...ATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGGACTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS TCA 90 bp ACAAAGCTGGACAGGCTGAAAAATCAACAACTCTTCTTGCACCTTTaGACCAACCATGAGGAATGTGAAATGCTGATTGGCATAGGCCTG +
Preference number: 5 (lower is better)
Translates to: TKLDRLKNQQLFLHL*TNHEECEMLIGIGL
Trigger: CAGGCCTATGCCAATCAGCATTTCACATTCCTCATGGTTGGTTCAAAGGTGCAAGAAGAGTTGTTGATTTTTCAGCCTGTCCAGCTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521587.1
CDS CCA 90 bp TCTTTTCTCTGTTGTTCTGTGTATACAAGTCATGAGTCACCAGAATaGGCCTGTGGGAGCTTTGAACCAACCATGAGGAATGTGAAATGC +
Preference number: 5 (lower is better)
Translates to: SFLCCSVYTSHESPE*ACGSFEPTMRNVKC
Trigger: GCATTTCACATTCCTCATGGTTGGTTCAAAGCTCCCACAGGCCCATTCTGGTGACTCATGACTTGTATACACAGAACAACAGAGAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521840.1
CDS-3UTR CAA 90 bp CCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATAAATTCAGCCCCTATGATAACTaGAGCCCTTTCCCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: PTATSQFCELLDIPFNKFSPYDN*SPFPFP
Trigger: AGGAAAGGGGAAAGGGCTCAAGTTATCATAGGGGCT...GAATTTATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS TCA 90 bp TTTCCAAAACTGCATTCGCATCAGTCCAATTGTTTTCTCAGAGACTaGGTCTTTAACTGCTGGGAGTCAGACGGATATTTCATGCCTCCT +
Preference number: 5 (lower is better)
Translates to: FPKLHSHQSNCFLRD*VFNCWESDGYFMPP
Trigger: AGGAGGCATGAAATATCCGTCTGACTCCCAGCAGTTAAAGACTCAGTCTCTGAGAAAACAATTGGACTGATGCGAATGCAGTTTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519804.1
CDS CCA 90 bp ATCAGCCATTTCTCCCTCTTCTGGTATCAACAGGTTGATTTTCCTTaGAATTTCCTCCATACATTTGACAGGGGTAAGGTTGACTCACTC +
Preference number: 5 (lower is better)
Translates to: ISHFSLFWYQQVDFP*NFLHTFDRGKVDSL
Trigger: GAGTGAGTCAACCTTACCCCTGTCAAATGTATGGAGGAAATTCCAAGGAAAATCAACCTGTTGATACCAGAAGAGGGAGAAATGGCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521063.1
CDS-3UTR CAA 90 bp CCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATAAATTCGTGCTTCTGGGAAAGTaGCTTCACTTTGAACCAACC +
Preference number: 5 (lower is better)
Translates to: PTATSQFCELLDIPFNKFVLLGK*LHFEPT
Trigger: GGTTGGTTCAAAGTGAAGCAACTTTCCCAGAAGCAC...GAATTTATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS-3UTR CAA 90 bp CAATGGCCACAGGCTGATGTGGTGGATTGTCACAGTATATATCTTCCACAGTTTTTCGCATCAGTCCAATaGTTTTCTCAGAGACTGAGT +
Preference number: 5 (lower is better)
Translates to: QWPQADVVDCHSIYLPQFFASVQ*FSQRLS
Trigger: ACTCAGTCTCTGAGAAAACAATTGGACTGATGCGAA...AAACTGTGGAAGATATATACTGTGACAATCCACCACATCAGCCTGTGGCCATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000518608.5
ENST00000520632.5
ENST00000522683.5
ENST00000523337.5
CDS-3UTR CAA 90 bp GAAACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTCTGCTCGCAAGTGACAATGCCTaGTGCTTTTCCAATATGACT +
Preference number: 5 (lower is better)
Translates to: ETPCSIQISMGRNTFLLLASDNA*CFSNMT
Trigger: AGTCATATTGGAAAAGCACAAGGCATTGTCACTTGC...GAGCAGAAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR CAA 90 bp CAAAACTGCATTCGCATCAGTCCAATTGTTTTCTCAGAGACTGAGTCTTTAACTCTAGTGCCCAGACACTaGTCTCTACTACCATTCTCC +
Preference number: 5 (lower is better)
Translates to: QNCIRISPIVFSETESLTLVPRH*SLLPFS
Trigger: GGAGAATGGTAGTAGAGACAAGTGTCTGGGCACTAG...AGTTAAAGACTCAGTCTCTGAGAAAACAATTGGACTGATGCGAATGCAGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518258.5
CDS-3UTR CAA 90 bp AATGGCCACAGGCTGATGTGGTGGATTGTCACAGTATATATCTTCCACAGTTTTTTCGCATCAGTCCAATaGTTTTCTCAGAGACTGAGT +
Preference number: 5 (lower is better)
Translates to: NGHRLMWWIVTVYIFHSFFASVQ*FSQRLS
Trigger: ACTCAGTCTCTGAGAAAACAATTGGACTGATGCGAA...AAAACTGTGGAAGATATATACTGTGACAATCCACCACATCAGCCTGTGGCCATT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000518608.5
ENST00000520632.5
ENST00000522683.5
ENST00000523337.5
CDS-3UTR CAA 90 bp CCTAGTCCCACGGCAACTTCTCAATTTTGTGAGCTACTTGACATCCCATTCAATCTTTTCCAATATGACTaGCAGCATGATCTGCATGAA +
Preference number: 5 (lower is better)
Translates to: PSPTATSQFCELLDIPFNLFQYD*QHDLHE
Trigger: TTCATGCAGATCATGCTGCAAGTCATATTGGAAAAG...ATTGAATGGGATGTCAAGTAGCTCACAAAATTGAGAAGTTGCCGTGGGACTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000396124.9
CDS-3UTR CAA 90 bp TGCTCTCAAGCAAGTGACAATGCCTTGTGCTTTTCCAATATGACTTGCAGCATGCTTTTCCAATATGACTaGCAGCATGATCTGCATGAA +
Preference number: 5 (lower is better)
Translates to: CSQASDNALCFSNMTCSMLFQYD*QHDLHE
Trigger: TTCATGCAGATCATGCTGCAAGTCATATTGGAAAAG...CATGCTGCAAGTCATATTGGAAAAGCACAAGGCATTGTCACTTGCTTGAGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
ENST00000523337.5
CDS-3UTR CAA 90 bp GCTTTAGGTGCAAGTGTGCTTGACTGGCAATGTCATATATTACATCTCTCACATCCAGAAAATTGTGAATaGTGTGAGGAAGGAGGGAAC +
Preference number: 5 (lower is better)
Translates to: ALGASVLDWQCHILHLSHPENCE*CEEGGN
Trigger: GTTCCCTCCTTCCTCACACAATTCACAATTTTCTGG...ATGTGAGAGATGTAATATATGACATTGCCAGTCAAGCACACTTGCACCTAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520757.1
CDS-3UTR CAA 90 bp ATGATATGGTGTTGCTCTCAAGCAAGTGACAATGCCTTGTGCTTTTCCAATATGTTCGCATCAGTCCAATaGTTTTCTCAGAGACTGAGT +
Preference number: 5 (lower is better)
Translates to: MIWCCSQASDNALCFSNMFASVQ*FSQRLS
Trigger: ACTCAGTCTCTGAGAAAACAATTGGACTGATGCGAA...CATATTGGAAAAGCACAAGGCATTGTCACTTGCTTGAGAGCAACACCATATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
ENST00000523337.5
CDS-3UTR CAA 90 bp CTCTCACATTTTTATCTTGGTTCCTCCGTAGAAAGTCCTCTTGTGAAACACCATGCAAGTGACAATGCCTaGTGCTTTTCCAATATGACT +
Preference number: 5 (lower is better)
Translates to: LSHFYLGSSVESPLVKHHASDNA*CFSNMT
Trigger: AGTCATATTGGAAAAGCACAAGGCATTGTCACTTGC...ATGGTGTTTCACAAGAGGACTTTCTACGGAGGAACCAAGATAAAAATGTGAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR CAA 90 bp TGTGAAACACCATGCAGCATACAAATATCCATGGGAAGGAACACCTTTCTTCTGTCTCCTTTCCTGATTTaGATTTTGTGTAGTTGCCCA +
Preference number: 5 (lower is better)
Translates to: CETPCSIQISMGRNTFLLSPFLI*ILCSCP
Trigger: TGGGCAACTACACAAAATCAAAATCAGGAAAGGAGA...CAGAAGAAAGGTGTTCCTTCCCATGGATATTTGTATGCTGCATGGTGTTTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520757.1
CDS CCA 90 bp AGTACAGTAGATTTTTGCCTGCCTATCAGCCATTTCTCCCTCTTCTaGTATCAACAGGTTGATTTTCCTTGGAATTTCCTCCATACATTT +
Preference number: 5 (lower is better)
Translates to: STVDFCLPISHFSLF*YQQVDFPWNFLHTF
Trigger: AAATGTATGGAGGAAATTCCAAGGAAAATCAACCTGTTGATACCAGAAGAGGGAGAAATGGCTGATAGGCAGGCAAAAATCTACTGTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521063.1
CDS-3UTR CAA 90 bp CTCTCACATTTTTATCTTGGTTCCTCCGTAGAAAGTCCTCTTGTGAAACACCATCTTTTCCAATATGACTaGCAGCATGATCTGCATGAA +
Preference number: 5 (lower is better)
Translates to: LSHFYLGSSVESPLVKHHLFQYD*QHDLHE
Trigger: TTCATGCAGATCATGCTGCAAGTCATATTGGAAAAG...ATGGTGTTTCACAAGAGGACTTTCTACGGAGGAACCAAGATAAAAATGTGAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR CAA 90 bp GCTTTAGGTGCAAGTGTGCTTGACTGGCAATGTCATATATTACATCTCTCACATCTTTTCCAATATGACTaGCAGCATGATCTGCATGAA +
Preference number: 5 (lower is better)
Translates to: ALGASVLDWQCHILHLSHLFQYD*QHDLHE
Trigger: TTCATGCAGATCATGCTGCAAGTCATATTGGAAAAG...ATGTGAGAGATGTAATATATGACATTGCCAGTCAAGCACACTTGCACCTAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
CDS-3UTR CAA 90 bp TTAACTTTTCCATATGTGAAGTTACTTCCAAATATCCTGGTGGTGGGTGGGTTTGCAAGTGACAATGCCTaGTGCTTTTCCAATATGACT +
Preference number: 5 (lower is better)
Translates to: LTFPYVKLLPNILVVGGFASDNA*CFSNMT
Trigger: AGTCATATTGGAAAAGCACAAGGCATTGTCACTTGC...AAACCCACCCACCACCAGGATATTTGGAAGTAACTTCACATATGGAAAAGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518258.5
ENST00000523337.5
CDS-3UTR CAA 90 bp GACTTGCAGCATGATCTGCATGAAGATCCTTTATACCCAATATTTCTAGTGTTATTCGCATCAGTCCAATaGTTTTCTCAGAGACTGAGT +
Preference number: 5 (lower is better)
Translates to: DLQHDLHEDPLYPIFLVLFASVQ*FSQRLS
Trigger: ACTCAGTCTCTGAGAAAACAATTGGACTGATGCGAA...TAACACTAGAAATATTGGGTATAAAGGATCTTCATGCAGATCATGCTGCAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520632.5
ENST00000520757.1
ENST00000523337.5
CDS-3UTR CAA 90 bp TTAACTTTTCCATATGTGAAGTTACTTCCAAATATCCTGGTGGTGGGTGGGTTTCTTTTCCAATATGACTaGCAGCATGATCTGCATGAA +
Preference number: 5 (lower is better)
Translates to: LTFPYVKLLPNILVVGGFLFQYD*QHDLHE
Trigger: TTCATGCAGATCATGCTGCAAGTCATATTGGAAAAG...AAACCCACCCACCACCAGGATATTTGGAAGTAACTTCACATATGGAAAAGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518258.5
ENST00000523337.5
CDS TCA 90 bp CATCCACATTATAGCACATGTCCATACTTCATTCCTTCTCACAGCTaGACAAGATTCCCTTCTGTGGATATATCACATTTTGTTTATCCA +
Preference number: 5 (lower is better)
Translates to: HPHYSTCPYFIPSHS*TRFPSVDISHFVYP
Trigger: TGGATAAACAAAATGTGATATATCCACAGAAGGGAATCTTGTTCAGCTGTGAGAAGGAATGAAGTATGGACATGTGCTATAATGTGGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521840.1
CDS GCA 90 bp CCAGGGCTCATTCCATTAAATCTACTAGGTCCCATAATTTTAAAGTaGATGTTCATTCCCACACATTTGCCTAAGACATTTTTGAATAGG +
Preference number: 5 (lower is better)
Translates to: PGLIPLNLLGPIILK*MFIPTHLPKTFLNR
Trigger: CCTATTCAAAAATGTCTTAGGCAAATGTGTGGGAATGAACATGCACTTTAAAATTATGGGACCTAGTAGATTTAATGGAATGAGCCCTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521840.1
CDS-3UTR CAA 90 bp GTTTTCAGCATAATTTTCCAGTTCCTTGATATTACGATATGCTTTGTCATCCAGTTCGCATCAGTCCAATaGTTTTCTCAGAGACTGAGT +
Preference number: 5 (lower is better)
Translates to: VFSIIFQFLDITICFVIQFASVQ*FSQRLS
Trigger: ACTCAGTCTCTGAGAAAACAATTGGACTGATGCGAA...CTGGATGACAAAGCATATCGTAATATCAAGGAACTGGAAAATTATGCTGAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000518608.5
ENST00000520632.5
ENST00000520757.1
ENST00000523337.5
CDS-3UTR CAA 90 bp GTTTTCAGCATAATTTTCCAGTTCCTTGATATTACGATATGCTTTGTCATCCAGGCAAGTGACAATGCCTaGTGCTTTTCCAATATGACT +
Preference number: 5 (lower is better)
Translates to: VFSIIFQFLDITICFVIQASDNA*CFSNMT
Trigger: AGTCATATTGGAAAAGCACAAGGCATTGTCACTTGC...CTGGATGACAAAGCATATCGTAATATCAAGGAACTGGAAAATTATGCTGAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
ENST00000523337.5
CDS-3UTR CAA 90 bp TTCCAATATGACTTGCAGCATGATCTGCATGAAGATCCTTTATACCCAATATTTTTCCTGATTTTGATTTaGTGTAGTTGCCCAGTCTGG +
Preference number: 5 (lower is better)
Translates to: FQYDLQHDLHEDPLYPIFFLILI*CSCPVW
Trigger: CCAGACTGGGCAACTACACAAAATCAAAATCAGGAA...AAATATTGGGTATAAAGGATCTTCATGCAGATCATGCTGCAAGTCATATTGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520757.1
CDS TCA 90 bp CAACCATCAGCACAATCAATTTTGGAACATTTCATCAACCCAGAATaGAACCTGTACCCATTAGCTAACCTACTTTATGTCCTTAGATTT +
Preference number: 5 (lower is better)
Translates to: QPSAQSILEHFINPE*NLYPLANLLYVLRF
Trigger: AAATCTAAGGACATAAAGTAGGTTAGCTAATGGGTACAGGTTTCATTCTGGGTTGATGAAATGTTCCAAAATTGATTGTGCTGATGGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521840.1
CDS CCA 90 bp TACATTTCATGTAAGTGGAATCGTGAAATGTATGGTCTTTGTGTCTaGCTTCTTTCACTTAGCATAATGTCTTTAACGCACATCCACATT +
Preference number: 5 (lower is better)
Translates to: YISCKWNREMYGLCV*LLSLSIMSLTHIHI
Trigger: AATGTGGATGTGCGTTAAAGACATTATGCTAAGTGAAAGAAGCCAGACACAAAGACCATACATTTCACGATTCCACTTACATGAAATGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521840.1
CDS-3UTR CAA 90 bp TTCCAATATGACTTGCAGCATGATCTGCATGAAGATCCTTTATACCCAATATTTCTTTTCCAATATGACTaGCAGCATGATCTGCATGAA +
Preference number: 5 (lower is better)
Translates to: FQYDLQHDLHEDPLYPIFLFQYD*QHDLHE
Trigger: TTCATGCAGATCATGCTGCAAGTCATATTGGAAAAG...AAATATTGGGTATAAAGGATCTTCATGCAGATCATGCTGCAAGTCATATTGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520757.1
ENST00000523337.5
CDS TCA 90 bp TCAGTATTTTTAAGCTTCTCAGATATTCCAATGTGCAGCCAAAGTTaGTTTCTTGTGCTCAGAAAACTAAAGCAGGGAATTATATCCACA +
Preference number: 5 (lower is better)
Translates to: SVFLSFSDIPMCSQS*FLVLRKLKQGIIST
Trigger: TGTGGATATAATTCCCTGCTTTAGTTTTCTGAGCACAAGAAATCAACTTTGGCTGCACATTGGAATATCTGAGAAGCTTAAAAATACTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS GCA 72 bp TCCGCCCAGACACCTCCGGCCCGGGCAGCCGCCGCATaGGCGCGTACAGACCCAGAGGCGGCCGGCGGCAGC +
Preference number: 6 (lower is better)
Translates to: SAQTPPARAAAA*ARTDPEAAGGS
Trigger: GCTGCCGCCGGCCGCCTCTGGGTCTGTACGCGCGCATGCGGCGGCTGCCCGGGCCGGAGGTGTCTGGGCGGA
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000396124.9
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000518608.5
ENST00000520632.5
ENST00000520757.1
ENST00000522683.5
ENST00000523337.5
CDS GCA 72 bp GACCCAGAGGCGGCCGGCGGCAGCACAGGCCGGGGATaGCAAGCCGCAACGGCCCCCAGACAGAGCCGTGCG +
Preference number: 6 (lower is better)
Translates to: DPEAAGGSTGRG*QAATAPRQSRA
Trigger: CGCACGGCTCTGTCTGGGGGCCGTTGCGGCTTGGCATCCCCGGCCTGTGCTGCCGCCGGCCGCCTCTGGGTC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396124.9
ENST00000517976.5
ENST00000518258.5
ENST00000523337.5
CDS CCA 72 bp GGCAGTAGTGGTCAGTGCCCCAGGCGCCCGGTCCGCTaGCCGCAGCCACGCTCCGCCCAGACACCTCCGGCC +
Preference number: 6 (lower is better)
Translates to: GSSGQCPRRPVR*PQPRSAQTPPA
Trigger: GGCCGGAGGTGTCTGGGCGGAGCGTGGCTGCGGCCAGCGGACCGGGCGCCTGGGGCACTGACCACTACTGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000396124.9
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000518608.5
ENST00000520632.5
ENST00000520757.1
ENST00000522683.5
ENST00000523337.5
CDS GCA 72 bp GGGATGCCAAGCCGCAACGGCCCCCAGACAGAGCCGTaGGCGGAGGCCGCCATGACGCCGGCACTGCGTGCC +
Preference number: 6 (lower is better)
Translates to: GMPSRNGPQTEP*AEAAMTPALRA
Trigger: GGCACGCAGTGCCGGCGTCATGGCGGCCTCCGCGCACGGCTCTGTCTGGGGGCCGTTGCGGCTTGGCATCCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396124.9
CDS GCA 72 bp CCCGTTTCCGCAGCAGCTCCAGGCAGTAGTGGTCAGTaGCCCAGGCGCCCGGTCCGCTGGCCGCAGCCACGC +
Preference number: 6 (lower is better)
Translates to: PVSAAAPGSSGQ*PRRPVRWPQPR
Trigger: GCGTGGCTGCGGCCAGCGGACCGGGCGCCTGGGGCACTGACCACTACTGCCTGGAGCTGCTGCGGAAACGGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396124.9
ENST00000454358.6
ENST00000517976.5
ENST00000518258.5
ENST00000520632.5
ENST00000520757.1
ENST00000522683.5
ENST00000523337.5
CDS GCA 72 bp AGGCCGAAGAAGAGACCTGGGTGGGCGGGCTGGAAATaGCTTCCCTGGGCGCGCCGCGCAAGGCCGGCGGAG +
Preference number: 6 (lower is better)
Translates to: RPKKRPGWAGWK*LPWARRARPAE
Trigger: CTCCGCCGGCCTTGCGCGGCGCGCCCAGGGAAGGCATTTCCAGCCCGCCCACCCAGGTCTCTTCTTCGGCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519136.5
ENST00000523378.5
CDS GCA 72 bp TCTTTAACCGCAGCAGCTCCAGGCAGTAGTGGTCAGTaGCCCAGGCGCCCGGTCCGCTGGCCGCAGCCACGC +
Preference number: 6 (lower is better)
Translates to: SLTAAAPGSSGQ*PRRPVRWPQPR
Trigger: GCGTGGCTGCGGCCAGCGGACCGGGCGCCTGGGGCACTGACCACTACTGCCTGGAGCTGCTGCGGTTAAAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518608.5
CDS CCA 72 bp TCAGAAAGGCCGAAGAAGAGACCTGGGTGGGCGGGCTaGAAATGCCTTCCCTGGGCGCGCCGCGCAAGGCCG +
Preference number: 6 (lower is better)
Translates to: SERPKKRPGWAG*KCLPWARRARP
Trigger: CGGCCTTGCGCGGCGCGCCCAGGGAAGGCATTTCCAGCCCGCCCACCCAGGTCTCTTCTTCGGCCTTTCTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519136.5
ENST00000523378.5
CDS CAA 90 bp GCTCCGGGTGGTCGCGGACCGGGACTGGGGAGAGCAGAGCCGCACTaGGCCAGGCGCGTGGCTGAGTGGTGTTTACATTCTGCAGCCACT +
Preference number: 6 (lower is better)
Translates to: APGGRGPGLGRAEPH*ARRVAEWCLHSAAT
Trigger: AGTGGCTGCAGAATGTAAACACCACTCAGCCACGCGCCTGGCCAAGTGCGGCTCTGCTCTCCCCAGTCCCGGTCCGCGACCACCCGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523378.5
CDS CCA 72 bp GGCACCATGTCAGAAAGGCCGAAGAAGAGACCTGGGTaGGCGGGCTGGAAATGCCTTCCCTGGGCGCGCCGC +
Preference number: 6 (lower is better)
Translates to: GTMSERPKKRPG*AGWKCLPWARR
Trigger: GCGGCGCGCCCAGGGAAGGCATTTCCAGCCCGCCCACCCAGGTCTCTTCTTCGGCCTTTCTGACATGGTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519136.5
ENST00000523378.5
CDS CCA 72 bp GGCTGGCACCATGTCAGAAAGGCCGAAGAAGAGACCTaGGTGGGCGGGCTGGAAATGCCTTCCCTGGGCGCG +
Preference number: 6 (lower is better)
Translates to: GWHHVRKAEEET*VGGLEMPSLGA
Trigger: CGCGCCCAGGGAAGGCATTTCCAGCCCGCCCACCCAGGTCTCTTCTTCGGCCTTTCTGACATGGTGCCAGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519136.5
ENST00000523378.5
CDS CCA 72 bp GTCGCGGACCGGGACTGGGGAGAGCAGAGCCGCACTTaGCCAGGCGCGTGGCTGAGTGGTGTTTACATTCTG +
Preference number: 6 (lower is better)
Translates to: VADRDWGEQSRT*PGAWLSGVYIL
Trigger: CAGAATGTAAACACCACTCAGCCACGCGCCTGGCCAAGTGCGGCTCTGCTCTCCCCAGTCCCGGTCCGCGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523378.5
CDS CAA 72 bp GGTCGCGGACCGGGACTGGGGAGAGCAGAGCCGCACTaGGCCAGGCGCGTGGCTGAGTGGTGTTTACATTCT +
Preference number: 6 (lower is better)
Translates to: GRGPGLGRAEPH*ARRVAEWCLHS
Trigger: AGAATGTAAACACCACTCAGCCACGCGCCTGGCCAAGTGCGGCTCTGCTCTCCCCAGTCCCGGTCCGCGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523378.5
CDS TCA 72 bp GGGGAGAGCAGAGCCGCACTTGGCCAGGCGCGTGGCTaGGTGGTGTTTACATTCTGCAGCCACTCCACGTTG +
Preference number: 6 (lower is better)
Translates to: GESRAALGQARG*VVFTFCSHSTL
Trigger: CAACGTGGAGTGGCTGCAGAATGTAAACACCACTCAGCCACGCGCCTGGCCAAGTGCGGCTCTGCTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523378.5
CDS GCA 72 bp GCCTGTGCCGAAGTCACCACTGACCACCATCTGTTGTaGTGGACTCCTGCTGACTCCAGTAGGGCTGGCACC +
Preference number: 6 (lower is better)
Translates to: ACAEVTTDHHLL*WTPADSSRAGT
Trigger: GGTGCCAGCCCTACTGGAGTCAGCAGGAGTCCAGCACAACAGATGGTGGTCAGTGGTGACTTCGGCACAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000519136.5
ENST00000523378.5
CDS CCA 72 bp CCCTGGGCAGGAGCCAAGGTCAACAGTAGCAGTGACTaGGCAGGGACAGTCTCTGGGTCATCAGTAGGAGGG +
Preference number: 6 (lower is better)
Translates to: PWAGAKVNSSSD*AGTVSGSSVGG
Trigger: CCCTCCTACTGATGACCCAGAGACTGTCCCTGCCCAGTCACTGCTACTGTTGACCTTGGCTCCTGCCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS CCA 72 bp AGAGCAGAGCCGCACTTGGCCAGGCGCGTGGCTGAGTaGTGTTTACATTCTGCAGCCACTCCACGTTGTGCT +
Preference number: 6 (lower is better)
Translates to: RAEPHLARRVAE*CLHSAATPRCA
Trigger: AGCACAACGTGGAGTGGCTGCAGAATGTAAACACCACTCAGCCACGCGCCTGGCCAAGTGCGGCTCTGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523378.5
CDS CAA 72 bp ACTGCCTGTGCCGAAGTCACCACTGACCACCATCTGTaGTGCTGGACTCCTGCTGACTCCAGTAGGGCTGGC +
Preference number: 6 (lower is better)
Translates to: TACAEVTTDHHL*CWTPADSSRAG
Trigger: GCCAGCCCTACTGGAGTCAGCAGGAGTCCAGCACAACAGATGGTGGTCAGTGGTGACTTCGGCACAGGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000519136.5
ENST00000523378.5
CDS CAA 72 bp GAGCAGAGGGTGGAGCTCCAGACACTTCATGGGTTGTaGAGAGGTGGCTGCCTCTGCCTCCCAAAGTGCTGG +
Preference number: 6 (lower is better)
Translates to: EQRVELQTLHGL*RGGCLCLPKCW
Trigger: CCAGCACTTTGGGAGGCAGAGGCAGCCACCTCTCAACAACCCATGAAGTGTCTGGAGCTCCACCCTCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS CAA 90 bp TCCTCACGAACTGCCTGTGCCGAAGTCACCACTGACCACCATCTGTaGTGCTGGACTCCTGCTGACTCCAGTAGGGCTGGCACCATGTCA +
Preference number: 6 (lower is better)
Translates to: SSRTACAEVTTDHHL*CWTPADSSRAGTMS
Trigger: TGACATGGTGCCAGCCCTACTGGAGTCAGCAGGAGTCCAGCACAACAGATGGTGGTCAGTGGTGACTTCGGCACAGGCAGTTCGTGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000519136.5
ENST00000523378.5
CDS CAA 72 bp CTTGAGCAGAGGGTGGAGCTCCAGACACTTCATGGGTaGTTGAGAGGTGGCTGCCTCTGCCTCCCAAAGTGC +
Preference number: 6 (lower is better)
Translates to: LEQRVELQTLHG*LRGGCLCLPKC
Trigger: GCACTTTGGGAGGCAGAGGCAGCCACCTCTCAACAACCCATGAAGTGTCTGGAGCTCCACCCTCTGCTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS CAA 90 bp GCCGTTCCTCTTGAGCAGAGGGTGGAGCTCCAGACACTTCATGGGTaGTTGAGAGGTGGCTGCCTGCAACTTTCGTTGAGAGTACATGGG +
Preference number: 6 (lower is better)
Translates to: AVPLEQRVELQTLHG*LRGGCLQLSLRVHG
Trigger: CCCATGTACTCTCAACGAAAGTTGCAGGCAGCCACCTCTCAACAACCCATGAAGTGTCTGGAGCTCCACCCTCTGCTCAAGAGGAACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521587.1
CDS GCA 72 bp GAGCTCCAGACACTTCATGGGTTGTTGAGAGGTGGCTaGCTGCAACTTTCGTTGAGAGTACATGGGGAGGGG +
Preference number: 6 (lower is better)
Translates to: ELQTLHGLLRGG*LQLSLRVHGEG
Trigger: CCCCTCCCCATGTACTCTCAACGAAAGTTGCAGGCAGCCACCTCTCAACAACCCATGAAGTGTCTGGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521587.1
CDS CCA 72 bp CCCGGTGGTGGGTGTTACCCTTTCATCACCAGTGACTaGTCCAGGACAGTGCATATTTCCCTGATCTGGCCA +
Preference number: 6 (lower is better)
Translates to: PGGGCYPFITSD*SRTVHISLIWP
Trigger: TGGCCAGATCAGGGAAATATGCACTGTCCTGGACCAGTCACTGGTGATGAAAGGGTAACACCCACCACCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS CAA 90 bp GTTCCTCTTGAGCAGAGGGTGGAGCTCCAGACACTTCATGGGTTGTaGAGAGGTGGCTGCCTGCAACTTTCGTTGAGAGTACATGGGGAG +
Preference number: 6 (lower is better)
Translates to: VPLEQRVELQTLHGL*RGGCLQLSLRVHGE
Trigger: CTCCCCATGTACTCTCAACGAAAGTTGCAGGCAGCCACCTCTCAACAACCCATGAAGTGTCTGGAGCTCCACCCTCTGCTCAAGAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521587.1
CDS GCA 72 bp ACCAGCCTGAGCCAGTTCCACATTAAAGGCCCTCAGTaGAAAAACAGAGCTTCGGGATTCTGCAGGGAGCAG +
Preference number: 6 (lower is better)
Translates to: TSLSQFHIKGPQ*KNRASGFCREQ
Trigger: CTGCTCCCTGCAGAATCCCGAAGCTCTGTTTTTGCACTGAGGGCCTTTAATGTGGAACTGGCTCAGGCTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000396111.6
ENST00000396113.5
ENST00000454358.6
ENST00000517976.5
ENST00000520632.5
ENST00000523378.5
CDS GCA 72 bp TCCAGCCTGAGCCAGTTCCACATTAAAGGCCCTCAGTaGAAAAACAGAGCTTCGGGATTCTGCAGGGAGCAG +
Preference number: 6 (lower is better)
Translates to: SSLSQFHIKGPQ*KNRASGFCREQ
Trigger: CTGCTCCCTGCAGAATCCCGAAGCTCTGTTTTTGCACTGAGGGCCTTTAATGTGGAACTGGCTCAGGCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000518258.5
ENST00000519136.5
ENST00000522683.5
ENST00000523337.5
CDS CAA 72 bp GAGCAGAGGGTGGAGCTCCAGACACTTCATGGGTTGTaGAGAGGTGGCTGCCTGCAACTTTCGTTGAGAGTA +
Preference number: 6 (lower is better)
Translates to: EQRVELQTLHGL*RGGCLQLSLRV
Trigger: TACTCTCAACGAAAGTTGCAGGCAGCCACCTCTCAACAACCCATGAAGTGTCTGGAGCTCCACCCTCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521587.1
CDS CAA 72 bp CTTGAGCAGAGGGTGGAGCTCCAGACACTTCATGGGTaGTTGAGAGGTGGCTGCCTGCAACTTTCGTTGAGA +
Preference number: 6 (lower is better)
Translates to: LEQRVELQTLHG*LRGGCLQLSLR
Trigger: TCTCAACGAAAGTTGCAGGCAGCCACCTCTCAACAACCCATGAAGTGTCTGGAGCTCCACCCTCTGCTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521587.1
CDS CAA 90 bp GCCGTTCCTCTTGAGCAGAGGGTGGAGCTCCAGACACTTCATGGGTaGTTGAGAGGTGGCTGCCTCCAGTCTCTCTTTCTTGTGATTTTC +
Preference number: 6 (lower is better)
Translates to: AVPLEQRVELQTLHG*LRGGCLQSLFLVIF
Trigger: GAAAATCACAAGAAAGAGAGACTGGAGGCAGCCACCTCTCAACAACCCATGAAGTGTCTGGAGCTCCACCCTCTGCTCAAGAGGAACGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523378.5
CDS TCA 72 bp TTTCCCAGGCTGGCTGGCTGTGCAAGACACACGCCCTaGGTGTCTGCATCCTTAATTTCATGCTTTAGGTGC +
Preference number: 6 (lower is better)
Translates to: FPRLAGCARHTP*VSASLISCFRC
Trigger: GCACCTAAAGCATGAAATTAAGGATGCAGACACTCAGGGCGTGTGTCTTGCACAGCCAGCCAGCCTGGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523184.5
CDS CCA 72 bp CTGCAACTTTCGTTGAGAGTACATGGGGAGGGGCCTTaGCAGGAGCAGTTCAGTAGACATCTCACCATACCA +
Preference number: 6 (lower is better)
Translates to: LQLSLRVHGEGP*QEQFSRHLTIP
Trigger: TGGTATGGTGAGATGTCTACTGAACTGCTCCTGCCAAGGCCCCTCCCCATGTACTCTCAACGAAAGTTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396113.5
ENST00000521587.1
CDS CAA 90 bp GTTCCTCTTGAGCAGAGGGTGGAGCTCCAGACACTTCATGGGTTGTaGAGAGGTGGCTGCCTCCAGTCTCTCTTTCTTGTGATTTTCCTC +
Preference number: 6 (lower is better)
Translates to: VPLEQRVELQTLHGL*RGGCLQSLFLVIFL
Trigger: GAGGAAAATCACAAGAAAGAGAGACTGGAGGCAGCCACCTCTCAACAACCCATGAAGTGTCTGGAGCTCCACCCTCTGCTCAAGAGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523378.5
CDS TCA 72 bp AGCAGAGGGTGGAGCTCCAGACACTTCATGGGTTGTTaGGAGGTGGCTCCAGTCTCTCTTTCTTGTGATTTT +
Preference number: 6 (lower is better)
Translates to: SRGWSSRHFMGC*EVAPVSLSCDF
Trigger: AAAATCACAAGAAAGAGAGACTGGAGCCACCTCTCAACAACCCATGAAGTGTCTGGAGCTCCACCCTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396111.6
CDS TCA 72 bp GACAGGGGTAAGGTTGACTCACTCACACCTAAGGGCTaGCCAATCAGAGCCACAAAACCACCTGAACACTAT +
Preference number: 6 (lower is better)
Translates to: DRGKVDSLTPKG*PIRATKPPEHY
Trigger: ATAGTGTTCAGGTGGTTTTGTGGCTCTGATTGGTCAGCCCTTAGGTGTGAGTGAGTCAACCTTACCCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521063.1
CDS TCA 72 bp AAAGACCCTCATCCGAGGTCTGACAGCTCGCGTATGTaGAATACGTGGCTAGAAAAGCCTCGACTGAGTCAA +
Preference number: 6 (lower is better)
Translates to: KDPHPRSDSSRM*NTWLEKPRLSQ
Trigger: TTGACTCAGTCGAGGCTTTTCTAGCCACGTATTTCACATACGCGAGCTGTCAGACCTCGGATGAGGGTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523184.5
CDS TCA 72 bp TCACCAGTGACTGGTCCAGGACAGTGCATATTTCCCTaGTCTGGCCAATTAGACTTGAGAACAAGTCCACTG +
Preference number: 6 (lower is better)
Translates to: SPVTGPGQCIFP*SGQLDLRTSPL
Trigger: CAGTGGACTTGTTCTCAAGTCTAATTGGCCAGATCAGGGAAATATGCACTGTCCTGGACCAGTCACTGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS TCA 72 bp ACAGTACAGCAAGACAGCAGCAAGAGTAATCCAGCCTaGGCCAGTTCCACATTAAAGGCCCTCAGTGCAAAA +
Preference number: 6 (lower is better)
Translates to: TVQQDSSKSNPA*ASSTLKALSAK
Trigger: TTTTGCACTGAGGGCCTTTAATGTGGAACTGGCTCAGGCTGGATTACTCTTGCTGCTGTCTTGCTGTACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518258.5
ENST00000519136.5
ENST00000522683.5
ENST00000523337.5
CDS CCA 72 bp AGTGACTGGTCCAGGACAGTGCATATTTCCCTGATCTaGCCAATTAGACTTGAGAACAAGTCCACTGTGGTG +
Preference number: 6 (lower is better)
Translates to: SDWSRTVHISLI*PIRLENKSTVV
Trigger: CACCACAGTGGACTTGTTCTCAAGTCTAATTGGCCAGATCAGGGAAATATGCACTGTCCTGGACCAGTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS TCA 72 bp GTCCACTGTGGTGCTTCTGGGAAAGTTGCTTCACTTTaGACCAACCATGAGGAATGTGAAATGCTGATTGGC +
Preference number: 6 (lower is better)
Translates to: VHCGASGKVASL*TNHEECEMLIG
Trigger: GCCAATCAGCATTTCACATTCCTCATGGTTGGTTCAAAGTGAAGCAACTTTCCCAGAAGCACCACAGTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS TCA 72 bp TCTGAGTATGTGCAAGAGAGCTCCAACCAGTGTGGCTaGGTCAACTGGAGAAAGTTTCAAGGACATCTTGTC +
Preference number: 6 (lower is better)
Translates to: SEYVQESSNQCG*VNWRKFQGHLV
Trigger: GACAAGATGTCCTTGAAACTTTCTCCAGTTGACTCAGCCACACTGGTTGGAGCTCTCTTGCACATACTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523184.5
CDS TCA 72 bp TGTAAAAAGCATGATCCAGGCCCCAGTGATCATGGCTaGAGAACAAATCACCATCTGCGGCATCTTGAAGCT +
Preference number: 6 (lower is better)
Translates to: CKKHDPGPSDHG*RTNHHLRHLEA
Trigger: AGCTTCAAGATGCCGCAGATGGTGATTTGTTCTTCAGCCATGATCACTGGGGCCTGGATCATGCTTTTTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523184.5
CDS CCA 72 bp ATAAGTGAAGAAACTAAGGTAAATAAGTGCCTGGGTTaGGACCATTCAAAGCCAGGTCCCCTGGCTCCCAAT +
Preference number: 6 (lower is better)
Translates to: ISEETKVNKCLG*DHSKPGPLAPN
Trigger: ATTGGGAGCCAGGGGACCTGGCTTTGAATGGTCCCAACCCAGGCACTTATTTACCTTAGTTTCTTCACTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521840.1
CDS CAA 72 bp CTTGGAATTTCCTCCATACATTTGACAGGGGTAAGGTaGACTCACTCACACCTAAGGGCTGACCAATCAGAG +
Preference number: 6 (lower is better)
Translates to: LGISSIHLTGVR*THSHLRADQSE
Trigger: CTCTGATTGGTCAGCCCTTAGGTGTGAGTGAGTCAACCTTACCCCTGTCAAATGTATGGAGGAAATTCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521063.1
CDS TCA 72 bp CGTCATAAGGTACATGAGACTGTAGAGCTTGGGAACTaGGGGTGCTGCCAGATGTTATCATCAGATGAAAAG +
Preference number: 6 (lower is better)
Translates to: RHKVHETVELGN*GCCQMLSSDEK
Trigger: CTTTTCATCTGATGATAACATCTGGCAGCACCCTCAGTTCCCAAGCTCTACAGTCTCATGTACCTTATGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521063.1
ENST00000523184.5
CDS CCA 72 bp CCAATCAGAGCCACAAAACCACCTGAACACTATGATTaGCTCAGGAACAAACATGTGACACAAGCTTGGCAA +
Preference number: 6 (lower is better)
Translates to: PIRATKPPEHYD*LRNKHVTQAWQ
Trigger: TTGCCAAGCTTGTGTCACATGTTTGTTCCTGAGCCAATCATAGTGTTCAGGTGGTTTTGTGGCTCTGATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521063.1
CDS CCA 72 bp TGTTGTTCTGTGTATACAAGTCATGAGTCACCAGAATaGGCCTGTGGGAGCTTTGAACCAACCATGAGGAAT +
Preference number: 6 (lower is better)
Translates to: CCSVYTSHESPE*ACGSFEPTMRN
Trigger: ATTCCTCATGGTTGGTTCAAAGCTCCCACAGGCCCATTCTGGTGACTCATGACTTGTATACACAGAACAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521840.1
CDS CAA 90 bp TTTGCCTGCCTATCAGCCATTTCTCCCTCTTCTGGTATCAACAGGTaGATTTTCCTTGGAATTTCCTCCATACATTTGACAGGGGTAAGG +
Preference number: 6 (lower is better)
Translates to: FACLSAISPSSGINR*IFLGISSIHLTGVR
Trigger: CCTTACCCCTGTCAAATGTATGGAGGAAATTCCAAGGAAAATCAACCTGTTGATACCAGAAGAGGGAGAAATGGCTGATAGGCAGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521063.1
CDS TCA 72 bp CTGCATTCGCATCAGTCCAATTGTTTTCTCAGAGACTaGGTCTTTAACTGCTGGGAGTCAGACGGATATTTC +
Preference number: 6 (lower is better)
Translates to: LHSHQSNCFLRD*VFNCWESDGYF
Trigger: GAAATATCCGTCTGACTCCCAGCAGTTAAAGACTCAGTCTCTGAGAAAACAATTGGACTGATGCGAATGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519804.1
CDS CCA 72 bp AGTTATGCTTCTAACTTCCTGATGCAGTCGTTTGAATaGAGAAGTGTGCGTTCCTCTGAGTATGTGCAAGAG +
Preference number: 6 (lower is better)
Translates to: SYASNFLMQSFE*RSVRSSEYVQE
Trigger: CTCTTGCACATACTCAGAGGAACGCACACTTCTCCATTCAAACGACTGCATCAGGAAGTTAGAAGCATAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523184.5
CDS CCA 72 bp TATATTCAGGAAGCAGAGGCAACTTTGCCTCTGACATaGAGTAGCCCTCTAGACCAAACATTTCAGATCATT +
Preference number: 6 (lower is better)
Translates to: YIQEAEATLPLT*SSPLDQTFQII
Trigger: AATGATCTGAAATGTTTGGTCTAGAGGGCTACTCCATGTCAGAGGCAAAGTTGCCTCTGCTTCCTGAATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521063.1
CDS CAA 72 bp AACAGGTTGATTTTCCTTGGAATTTCCTCCATACATTaGACAGGGGTAAGGTTGACTCACTCACACCTAAGG +
Preference number: 6 (lower is better)
Translates to: NRLIFLGISSIH*TGVRLTHSHLR
Trigger: CCTTAGGTGTGAGTGAGTCAACCTTACCCCTGTCAAATGTATGGAGGAAATTCCAAGGAAAATCAACCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521063.1
CDS TCA 72 bp CACCTGAACACTATGATTGGCTCAGGAACAAACATGTaGCACAAGCTTGGCAAAACAGAGTCAAACTTAATC +
Preference number: 6 (lower is better)
Translates to: HLNTMIGSGTNM*HKLGKTESNLI
Trigger: GATTAAGTTTGACTCTGTTTTGCCAAGCTTGTGTCACATGTTTGTTCCTGAGCCAATCATAGTGTTCAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521063.1
CDS TCA 72 bp CTCAGAAAACTAAAGCAGGGAATTATATCCACAAAATaGGAATGGGTGGCTGCAACTTTCGTTGAGAGTACA +
Preference number: 6 (lower is better)
Translates to: LRKLKQGIISTK*EWVAATFVEST
Trigger: TGTACTCTCAACGAAAGTTGCAGCCACCCATTCTCATTTTGTGGATATAATTCCCTGCTTTAGTTTTCTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS CAA 72 bp CTATCAGCCATTTCTCCCTCTTCTGGTATCAACAGGTaGATTTTCCTTGGAATTTCCTCCATACATTTGACA +
Preference number: 6 (lower is better)
Translates to: LSAISPSSGINR*IFLGISSIHLT
Trigger: TGTCAAATGTATGGAGGAAATTCCAAGGAAAATCAACCTGTTGATACCAGAAGAGGGAGAAATGGCTGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521063.1
CDS CCA 72 bp TGTAAGTGGAATCGTGAAATGTATGGTCTTTGTGTCTaGCTTCTTTCACTTAGCATAATGTCTTTAACGCAC +
Preference number: 6 (lower is better)
Translates to: CKWNREMYGLCV*LLSLSIMSLTH
Trigger: GTGCGTTAAAGACATTATGCTAAGTGAAAGAAGCCAGACACAAAGACCATACATTTCACGATTCCACTTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521840.1
CDS TCA 72 bp TTAAGCTTCTCAGATATTCCAATGTGCAGCCAAAGTTaGTTTCTTGTGCTCAGAAAACTAAAGCAGGGAATT +
Preference number: 6 (lower is better)
Translates to: LSFSDIPMCSQS*FLVLRKLKQGI
Trigger: AATTCCCTGCTTTAGTTTTCTGAGCACAAGAAATCAACTTTGGCTGCACATTGGAATATCTGAGAAGCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS CAA 72 bp TTTAAGCTTCTCAGATATTCCAATGTGCAGCCAAAGTaGATTTCTTGTGCTCAGAAAACTAAAGCAGGGAAT +
Preference number: 6 (lower is better)
Translates to: FKLLRYSNVQPK*ISCAQKTKAGN
Trigger: ATTCCCTGCTTTAGTTTTCTGAGCACAAGAAATCAACTTTGGCTGCACATTGGAATATCTGAGAAGCTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS CAA 90 bp ATCAGTATTTTTAAGCTTCTCAGATATTCCAATGTGCAGCCAAAGTaGATTTCTTGTGCTCAGAAAACTAAAGCAGGGAATTATATCCAC +
Preference number: 6 (lower is better)
Translates to: ISIFKLLRYSNVQPK*ISCAQKTKAGNYIH
Trigger: GTGGATATAATTCCCTGCTTTAGTTTTCTGAGCACAAGAAATCAACTTTGGCTGCACATTGGAATATCTGAGAAGCTTAAAAATACTGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396113.5
CDS CCA 72 bp TCCTTAGATTTAGCTATTCTGTACATTTCATGTAAGTaGAATCGTGAAATGTATGGTCTTTGTGTCTGGCTT +
Preference number: 6 (lower is better)
Translates to: SLDLAILYISCK*NREMYGLCVWL
Trigger: AAGCCAGACACAAAGACCATACATTTCACGATTCCACTTACATGAAATGTACAGAATAGCTAAATCTAAGGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521840.1