Pregenerated sensors for NDUFAF1 (Homo sapiens)
Ensembl gene IDs: ENSG00000137806Ensembl transcript IDs: ENST00000260361.9, ENST00000558719.2, ENST00000559127.5, ENST00000560978.2, ENST00000676533.1, ENST00000677477.1, ENST00000678029.1, ENST00000678745.1, ENST00000679094.1, ENST00000679240.1
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GAGGCCAAGGTGGGCAGATCACAAGGTCCAGTTAAAAACCAGCCTGCCCAATATCCGGGAGGTAGAGGTTaGAGTGAGCCGAGATCATGC | + |
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Preference number: 2 (lower is better) Translates to: EAKVGRSQGPVKNQPAQYPGGRG*SEPRSC Trigger: GCATGATCTCGGCTCACTGCAACCTCTACCTCCCGG...ATATTGGGCAGGCTGGTTTTTAACTGGACCTTGTGATCTGCCCACCTTGGCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000676533.1 ENST00000679094.1 |
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| 3UTR-3UTR TCA 90 bp | CAACACTGGGAGGCCAAGGTGGGCAGATCACAAGGTCCAGTTAAAAACCAGCCTGCCAGCCTTCTCAAATaGACTCAGTCTCCCCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: QHWEAKVGRSQGPVKNQPASLLK*TQSPQS Trigger: ACTCTGGGGAGACTGAGTTCATTTGAGAAGGCTGGC...AGGCTGGTTTTTAACTGGACCTTGTGATCTGCCCACCTTGGCCTCCCAGTGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000676533.1 ENST00000679094.1 |
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| 3UTR-3UTR TCA 90 bp | GAGGCCAAGGTGGGCAGATCACAAGGTCCAGTTAAAAACCAGCCTGCCCAATATGGCAGGAGAAATGCTTaGACCCGGGAGGTAGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: EAKVGRSQGPVKNQPAQYGRRNA*TREVEV Trigger: AACCTCTACCTCCCGGGTTCAAGCATTTCTCCTGCC...ATATTGGGCAGGCTGGTTTTTAACTGGACCTTGTGATCTGCCCACCTTGGCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000676533.1 ENST00000679094.1 |
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| 3UTR-3UTR TCA 90 bp | CTTATCAAGCGGAAGCTCATGCTGAACATCCCGGATTCTTCCTCGATTAGAGAAACTCCCAACCTCAAGTaGTCCGTCCGCCTTGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: LIKRKLMLNIPDSSSIRETPNLK*SVRLGL Trigger: GAGGCCAAGGCGGACGGATCACTTGAGGTTGGGAGT...TTCTCTAATCGAGGAAGAATCCGGGATGTTCAGCATGAGCTTCCGCTTGATAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000559127.5 ENST00000678029.1 |
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| 3UTR-3UTR CCA 90 bp | GAGCCGAGATCACGCTACTGCACGCCAGCATGCCAGCCTGGGCGACAGAGCAGAATACATACTAGCCATTaGTTGGATGCCATTAAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: EPRSRYCTPACQPGRQSRIHTSH*LDAIKE Trigger: TTCTTTAATGGCATCCAACCAATGGCTAGTATGTAT...TCTGCTCTGTCGCCCAGGCTGGCATGCTGGCGTGCAGTAGCGTGATCTCGGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560978.2 |
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| 3UTR-3UTR TCA 90 bp | AATTTGGAAAAAGGAATCGAAACCTCCGCCTCCTGGGTTCAAGCAATTATCCTGACTCCCAACCTCAAGTaGTCCGTCCGCCTTGGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: NLEKGIETSASWVQAIILTPNLK*SVRLGL Trigger: GAGGCCAAGGCGGACGGATCACTTGAGGTTGGGAGT...CAGGATAATTGCTTGAACCCAGGAGGCGGAGGTTTCGATTCCTTTTTCCAAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000559127.5 ENST00000678029.1 |
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| 3UTR-3UTR CCA 90 bp | CAACACTGGGAGGCCAAGGTGGGCAGATCACAAGGTCCAGTTAAAAACCAGCCTATTAGCCAAGTGTGGTaGCAGGCACCTGTAATTCCA | + |
|
Preference number: 2 (lower is better) Translates to: QHWEAKVGRSQGPVKNQPISQVW*QAPVIP Trigger: TGGAATTACAGGTGCCTGCCACCACACTTGGCTAAT...AGGCTGGTTTTTAACTGGACCTTGTGATCTGCCCACCTTGGCCTCCCAGTGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000676533.1 ENST00000679094.1 |
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| 3UTR-3UTR TCA 90 bp | GATCACAAGGTCCAGTTAAAAACCAGCCTGCCCAATATGGTAAAACCTCGTCTCGGCAGGAGAAATGCTTaGACCCGGGAGGTAGAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: DHKVQLKTSLPNMVKPRLGRRNA*TREVEV Trigger: AACCTCTACCTCCCGGGTTCAAGCATTTCTCCTGCC...GAGACGAGGTTTTACCATATTGGGCAGGCTGGTTTTTAACTGGACCTTGTGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000676533.1 ENST00000679094.1 |
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| 3UTR-3UTR GCA 90 bp | CAAGGTCCAGTTAAAAACCAGCCTGCCCAATATGGTAAAACCTCGTCTCTACTACCGGGAGGTAGAGGTTaGAGTGAGCCGAGATCATGC | + |
|
Preference number: 2 (lower is better) Translates to: QGPVKNQPAQYGKTSSLLPGGRG*SEPRSC Trigger: GCATGATCTCGGCTCACTGCAACCTCTACCTCCCGG...TAGTAGAGACGAGGTTTTACCATATTGGGCAGGCTGGTTTTTAACTGGACCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000676533.1 ENST00000679094.1 |
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| 3UTR-3UTR TCA 90 bp | GATCACAAGGTCCAGTTAAAAACCAGCCTGCCCAATATGGTAAAACCTCGTCTCGCCAGCCTTCTCAAATaGACTCAGTCTCCCCAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: DHKVQLKTSLPNMVKPRLASLLK*TQSPQS Trigger: ACTCTGGGGAGACTGAGTTCATTTGAGAAGGCTGGC...GAGACGAGGTTTTACCATATTGGGCAGGCTGGTTTTTAACTGGACCTTGTGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000676533.1 ENST00000679094.1 |
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| 3UTR-3UTR TCA 90 bp | AGGCCAAGGTGGGCAGATCACAAGGTCCAGTTAAAAACCAGCCTGCCCAATATGCTAGTAAGGACGACATaGATGCCTAATGGAGTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: RPRWADHKVQLKTSLPNMLVRTT*MPNGVP Trigger: AGGAACTCCATTAGGCATTCATGTCGTCCTTACTAG...CATATTGGGCAGGCTGGTTTTTAACTGGACCTTGTGATCTGCCCACCTTGGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000676533.1 ENST00000679094.1 |
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| 3UTR-3UTR CCA 90 bp | CAAGGTCCAGTTAAAAACCAGCCTGCCCAATATGGTAAAACCTCGTCTCTACTAAAGATTAGCCAAGTGTaGTGGCAGGCACCTGTAATT | + |
|
Preference number: 2 (lower is better) Translates to: QGPVKNQPAQYGKTSSLLKISQV*WQAPVI Trigger: AATTACAGGTGCCTGCCACCACACTTGGCTAATCTT...TAGTAGAGACGAGGTTTTACCATATTGGGCAGGCTGGTTTTTAACTGGACCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000676533.1 ENST00000679094.1 |
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| 3UTR-3UTR CCA 90 bp | AAAATCTCATACAGTGACGTACTGAGATTATTCCAGGAGTTTAAAATCCCATCAACTGGGAGGCCAAGGTaGGCAGATCACAAGGTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: KISYSDVLRLFQEFKIPSTGRPR*ADHKVQ Trigger: CTGGACCTTGTGATCTGCCCACCTTGGCCTCCCAGT...TGATGGGATTTTAAACTCCTGGAATAATCTCAGTACGTCACTGTATGAGATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000676533.1 ENST00000679094.1 |
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| 3UTR-3UTR GCA 90 bp | AAAATCTCATACAGTGACGTACTGAGATTATTCCAGGAGTTTAAAATCCCATCACTGAGGCAGGAGAAATaGTTGAACCCGGGAGGTAGA | + |
|
Preference number: 2 (lower is better) Translates to: KISYSDVLRLFQEFKIPSLRQEK*LNPGGR Trigger: TCTACCTCCCGGGTTCAAGCATTTCTCCTGCCTCAG...TGATGGGATTTTAAACTCCTGGAATAATCTCAGTACGTCACTGTATGAGATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000676533.1 ENST00000679094.1 |
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| 3UTR GCA 72 bp | GAAGGCGAAGGTTACGGTGAGCCGAGATCACGCTACTaGACGCCAGCATGCCAGCCTGGGCGACAGAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: EGEGYGEPRSRY*TPACQPGRQSR Trigger: TCTGCTCTGTCGCCCAGGCTGGCATGCTGGCGTGCAGTAGCGTGATCTCGGCTCACCGTAACCTTCGCCTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560978.2 |
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| 3UTR-3UTR CAA 90 bp | GAGCCGAGATCACGCTACTGCACGCCAGCATGCCAGCCTGGGCGACAGAGCAGACATACTAGCCATTGGTaGGATGCCATTAAAGAAATA | + |
|
Preference number: 3 (lower is better) Translates to: EPRSRYCTPACQPGRQSRHTSHW*DAIKEI Trigger: TATTTCTTTAATGGCATCCAACCAATGGCTAGTATG...TCTGCTCTGTCGCCCAGGCTGGCATGCTGGCGTGCAGTAGCGTGATCTCGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560978.2 |
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| CDS-3UTR CCA 90 bp | GAGCCGAGATCACGCTACTGCACGCCAGCATGCCAGCCTGGGCGACAGAGCAGAGCCAGCATGCCAGCCTaGGCGACAGAGCAGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: EPRSRYCTPACQPGRQSRASMPA*ATEQNS Trigger: GGAGTTCTGCTCTGTCGCCCAGGCTGGCATGCTGGC...TCTGCTCTGTCGCCCAGGCTGGCATGCTGGCGTGCAGTAGCGTGATCTCGGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560978.2 |
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| CDS-3UTR TCA 90 bp | GAGCCGAGATCACGCTACTGCACGCCAGCATGCCAGCCTGGGCGACAGAGCAGATGGAAAAAGGAATCTTaGCCTCCTGCCAGTAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: EPRSRYCTPACQPGRQSRWKKES*PPASRV Trigger: GACCCTACTGGCAGGAGGTCAAGATTCCTTTTTCCA...TCTGCTCTGTCGCCCAGGCTGGCATGCTGGCGTGCAGTAGCGTGATCTCGGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000560978.2 |
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| CDS-3UTR GCA 90 bp | CTTATCAAGCGGAAGCTCATGCTGAACATCCCGGATTCTTCCTCGATTAGAGAACACCAACCGCCGGCCTaGCGCCGCTTACCTCCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LIKRKLMLNIPDSSSIREHQPPA*RRLPPR Trigger: TCGGGGAGGTAAGCGGCGGCAGGCCGGCGGTTGGTG...TTCTCTAATCGAGGAAGAATCCGGGATGTTCAGCATGAGCTTCCGCTTGATAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000559127.5 ENST00000678745.1 |
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| CDS-3UTR CCA 90 bp | GATCTTATCAAGCGGAAGCTCATGCTGAACATCCCGGATTCTTCCTCGATTAGAGACGGTTCGCCGCGCTaGGGAGGCCCCCTCAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: DLIKRKLMLNIPDSSSIRDGSPR*GGPLNP Trigger: AGGGTTGAGGGGGCCTCCCCAGCGCGGCGAACCGTC...TCTAATCGAGGAAGAATCCGGGATGTTCAGCATGAGCTTCCGCTTGATAAGATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000559127.5 ENST00000678029.1 ENST00000678745.1 |
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| CDS-3UTR CCA 90 bp | CTTATCAAGCGGAAGCTCATGCTGAACATCCCGGATTCTTCCTCGATTAGAGAACCCGCACTCACGGCCTaGCCTCCGGAGGCTAGACGG | + |
|
Preference number: 4 (lower is better) Translates to: LIKRKLMLNIPDSSSIREPALTA*PPEARR Trigger: CCGTCTAGCCTCCGGAGGCCAGGCCGTGAGTGCGGG...TTCTCTAATCGAGGAAGAATCCGGGATGTTCAGCATGAGCTTCCGCTTGATAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000559127.5 ENST00000678029.1 ENST00000678745.1 |
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| CDS-3UTR GCA 90 bp | AATTTGGAAAAAGGAATCGAAACCTCCGCCTCCTGGGTTCAAGCAATTATCCTGCACCAACCGCCGGCCTaGCGCCGCTTACCTCCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: NLEKGIETSASWVQAIILHQPPA*RRLPPR Trigger: TCGGGGAGGTAAGCGGCGGCAGGCCGGCGGTTGGTG...CAGGATAATTGCTTGAACCCAGGAGGCGGAGGTTTCGATTCCTTTTTCCAAATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000559127.5 |
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| CDS-3UTR GCA 90 bp | CAAGGTCCAGTTAAAAACCAGCCTGCCCAATATGGTAAAACCTCGTCTCTACTACACCAACCGCCGGCCTaGCGCCGCTTACCTCCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: QGPVKNQPAQYGKTSSLLHQPPA*RRLPPR Trigger: TCGGGGAGGTAAGCGGCGGCAGGCCGGCGGTTGGTG...TAGTAGAGACGAGGTTTTACCATATTGGGCAGGCTGGTTTTTAACTGGACCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000679094.1 |
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| CDS-3UTR GCA 90 bp | CAACACTGGGAGGCCAAGGTGGGCAGATCACAAGGTCCAGTTAAAAACCAGCCTCCGGGAGGTAGAGGTTaGAGTGAGCCGAGATCATGC | + |
|
Preference number: 4 (lower is better) Translates to: QHWEAKVGRSQGPVKNQPPGGRG*SEPRSC Trigger: GCATGATCTCGGCTCACTGCAACCTCTACCTCCCGG...AGGCTGGTTTTTAACTGGACCTTGTGATCTGCCCACCTTGGCCTCCCAGTGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000676533.1 ENST00000679094.1 |
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| CDS-3UTR CCA 90 bp | AATTTGGAAAAAGGAATCGAAACCTCCGCCTCCTGGGTTCAAGCAATTATCCTGCCCGCACTCACGGCCTaGCCTCCGGAGGCTAGACGG | + |
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Preference number: 4 (lower is better) Translates to: NLEKGIETSASWVQAIILPALTA*PPEARR Trigger: CCGTCTAGCCTCCGGAGGCCAGGCCGTGAGTGCGGG...CAGGATAATTGCTTGAACCCAGGAGGCGGAGGTTTCGATTCCTTTTTCCAAATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000559127.5 ENST00000678029.1 |
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| CDS-3UTR CCA 90 bp | AAATTTGGAAAAAGGAATCGAAACCTCCGCCTCCTGGGTTCAAGCAATTATCCTGACGGTTCGCCGCGCTaGGGAGGCCCCCTCAACCCT | + |
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Preference number: 4 (lower is better) Translates to: KFGKRNRNLRLLGSSNYPDGSPR*GGPLNP Trigger: AGGGTTGAGGGGGCCTCCCCAGCGCGGCGAACCGTC...AGGATAATTGCTTGAACCCAGGAGGCGGAGGTTTCGATTCCTTTTTCCAAATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000559127.5 ENST00000678029.1 |
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| CDS-3UTR CCA 90 bp | GAGCCGAGATCACGCTACTGCACGCCAGCATGCCAGCCTGGGCGACAGAGCAGATTCTTCTGTATGAGCTaGATCAGTAAACACGCCAAT | + |
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Preference number: 4 (lower is better) Translates to: EPRSRYCTPACQPGRQSRFFCMS*ISKHAN Trigger: ATTGGCGTGTTTACTGATCCAGCTCATACAGAAGAA...TCTGCTCTGTCGCCCAGGCTGGCATGCTGGCGTGCAGTAGCGTGATCTCGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560978.2 |
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| CDS-3UTR GCA 90 bp | CTTATCAAGCGGAAGCTCATGCTGAACATCCCGGATTCTTCCTCGATTAGAGAACCCTCAACCCTCAAGTaGCAGGGCTCTGTCGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: LIKRKLMLNIPDSSSIREPSTLK*QGSVAS Trigger: GGAGGCGACAGAGCCCTGGCACTTGAGGGTTGAGGG...TTCTCTAATCGAGGAAGAATCCGGGATGTTCAGCATGAGCTTCCGCTTGATAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000559127.5 ENST00000678029.1 ENST00000678745.1 |
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| CDS-3UTR GCA 90 bp | GAGCCGAGATCACGCTACTGCACGCCAGCATGCCAGCCTGGGCGACAGAGCAGAACTACTGGAATACTCTaGAAAGCGAATACCCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: EPRSRYCTPACQPGRQSRTTGIL*KANTQK Trigger: TTTTTGGGTATTCGCTTTGCAGAGTATTCCAGTAGT...TCTGCTCTGTCGCCCAGGCTGGCATGCTGGCGTGCAGTAGCGTGATCTCGGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560978.2 |
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| CDS-3UTR GCA 90 bp | AATTTGGAAAAAGGAATCGAAACCTCCGCCTCCTGGGTTCAAGCAATTATCCTGCCCTCAACCCTCAAGTaGCAGGGCTCTGTCGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NLEKGIETSASWVQAIILPSTLK*QGSVAS Trigger: GGAGGCGACAGAGCCCTGGCACTTGAGGGTTGAGGG...CAGGATAATTGCTTGAACCCAGGAGGCGGAGGTTTCGATTCCTTTTTCCAAATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000559127.5 ENST00000678029.1 |
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| CDS-3UTR CCA 90 bp | GCAGTGGCCCTGAGAAGAAATATTCATCTGCCAGCCTTCTCAAATGAACTCAGTACTGGGAGGCCAAGGTaGGCAGATCACAAGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AVALRRNIHLPAFSNELSTGRPR*ADHKVQ Trigger: CTGGACCTTGTGATCTGCCCACCTTGGCCTCCCAGT...ACTGAGTTCATTTGAGAAGGCTGGCAGATGAATATTTCTTCTCAGGGCCACTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000676533.1 ENST00000679094.1 |
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| CDS-3UTR CCA 90 bp | GATCACAAGGTCCAGTTAAAAACCAGCCTGCCCAATATGGTAAAACCTCGTCTCACTGGGAGGCCAAGGTaGGCAGATCACAAGGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: DHKVQLKTSLPNMVKPRLTGRPR*ADHKVQ Trigger: CTGGACCTTGTGATCTGCCCACCTTGGCCTCCCAGT...GAGACGAGGTTTTACCATATTGGGCAGGCTGGTTTTTAACTGGACCTTGTGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000676533.1 ENST00000679094.1 |
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| CDS-3UTR TCA 90 bp | CTTATCAAGCGGAAGCTCATGCTGAACATCCCGGATTCTTCCTCGATTAGAGAATTAGCAGAGTTGCCTTaGCCTCCTGCCAGTAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LIKRKLMLNIPDSSSIRELAELP*PPASRV Trigger: GACCCTACTGGCAGGAGGTCAAGGCAACTCTGCTAA...TTCTCTAATCGAGGAAGAATCCGGGATGTTCAGCATGAGCTTCCGCTTGATAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000559127.5 ENST00000678029.1 ENST00000678745.1 |
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| CDS-3UTR TCA 90 bp | AAATTTGGAAAAAGGAATCGAAACCTCCGCCTCCTGGGTTCAAGCAATTATCCTACTCCCAACCTCAAGTaGTCCGTCCGCCTTGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: KFGKRNRNLRLLGSSNYPTPNLK*SVRLGL Trigger: GAGGCCAAGGCGGACGGATCACTTGAGGTTGGGAGT...AGGATAATTGCTTGAACCCAGGAGGCGGAGGTTTCGATTCCTTTTTCCAAATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000559127.5 ENST00000678029.1 |
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| CDS-3UTR TCA 90 bp | ATATTCATCTGCCAGCCTTCTCAAATGAACTCAGTCTCCCCAGAGTTCCGATTCGGCAGGAGAAATGCTTaGACCCGGGAGGTAGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: IFICQPSQMNSVSPEFRFGRRNA*TREVEV Trigger: AACCTCTACCTCCCGGGTTCAAGCATTTCTCCTGCC...GAATCGGAACTCTGGGGAGACTGAGTTCATTTGAGAAGGCTGGCAGATGAATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000676533.1 ENST00000679094.1 |
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| CDS-3UTR TCA 90 bp | GCCCTGAGAAGAAATATTCATCTGCCAGCCTTCTCAAATGAACTCAGTCTCCCCGCCAGCCTTCTCAAATaGACTCAGTCTCCCCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: ALRRNIHLPAFSNELSLPASLLK*TQSPQS Trigger: ACTCTGGGGAGACTGAGTTCATTTGAGAAGGCTGGC...GGGGAGACTGAGTTCATTTGAGAAGGCTGGCAGATGAATATTTCTTCTCAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000676533.1 ENST00000679094.1 |
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| CDS-3UTR CCA 90 bp | TTCCAGGAGTTTAAAATCCCATCAGGTGATGATTATAACTGGGTTTTAATGCTAGACGGTTCGCCGCGCTaGGGAGGCCCCCTCAACCCT | + |
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Preference number: 4 (lower is better) Translates to: FQEFKIPSGDDYNWVLMLDGSPR*GGPLNP Trigger: AGGGTTGAGGGGGCCTCCCCAGCGCGGCGAACCGTC...TAGCATTAAAACCCAGTTATAATCATCACCTGATGGGATTTTAAACTCCTGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000679094.1 |
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| CDS-3UTR TCA 90 bp | AAATTCCTTCAGGATGGGGGTATGGTTCATAGGAGAGGTCTAAGTCAGCCTCTGTGGAAAAAGGAATCTTaGCCTCCTGCCAGTAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: KFLQDGGMVHRRGLSQPLWKKES*PPASRV Trigger: GACCCTACTGGCAGGAGGTCAAGATTCCTTTTTCCA...CAGAGGCTGACTTAGACCTCTCCTATGAACCATACCCCCATCCTGAAGGAATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000676533.1 ENST00000679094.1 |
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| CDS-3UTR TCA 90 bp | AATTTGGAAAAAGGAATCGAAACCTCCGCCTCCTGGGTTCAAGCAATTATCCTGTTAGCAGAGTTGCCTTaGCCTCCTGCCAGTAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: NLEKGIETSASWVQAIILLAELP*PPASRV Trigger: GACCCTACTGGCAGGAGGTCAAGGCAACTCTGCTAA...CAGGATAATTGCTTGAACCCAGGAGGCGGAGGTTTCGATTCCTTTTTCCAAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000559127.5 ENST00000678029.1 |
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| CDS-3UTR TCA 90 bp | CAAGGTCCAGTTAAAAACCAGCCTGCCCAATATGGTAAAACCTCGTCTCTACTAGGCAGGAGAAATGCTTaGACCCGGGAGGTAGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: QGPVKNQPAQYGKTSSLLGRRNA*TREVEV Trigger: AACCTCTACCTCCCGGGTTCAAGCATTTCTCCTGCC...TAGTAGAGACGAGGTTTTACCATATTGGGCAGGCTGGTTTTTAACTGGACCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000676533.1 ENST00000679094.1 |
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| CDS-3UTR TCA 90 bp | GCAGTGGCCCTGAGAAGAAATATTCATCTGCCAGCCTTCTCAAATGAACTCAGTGCCAGCCTTCTCAAATaGACTCAGTCTCCCCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: AVALRRNIHLPAFSNELSASLLK*TQSPQS Trigger: ACTCTGGGGAGACTGAGTTCATTTGAGAAGGCTGGC...ACTGAGTTCATTTGAGAAGGCTGGCAGATGAATATTTCTTCTCAGGGCCACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000676533.1 ENST00000679094.1 |
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| CDS-3UTR GCA 90 bp | ATATTCATCTGCCAGCCTTCTCAAATGAACTCAGTCTCCCCAGAGTTCCGATTCCCGTATAGGTCCATCTaGTTTTCCCTTCCGATGCCA | + |
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Preference number: 4 (lower is better) Translates to: IFICQPSQMNSVSPEFRFPYRSI*FSLPMP Trigger: TGGCATCGGAAGGGAAAAGCAGATGGACCTATACGG...GAATCGGAACTCTGGGGAGACTGAGTTCATTTGAGAAGGCTGGCAGATGAATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000676533.1 |
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| CDS-3UTR CCA 90 bp | CTTATCAAGCGGAAGCTCATGCTGAACATCCCGGATTCTTCCTCGATTAGAGAAAAAATTCTTCCGCCTTaGCGTATACCTCCCGCACTC | + |
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Preference number: 4 (lower is better) Translates to: LIKRKLMLNIPDSSSIREKILPP*RIPPAL Trigger: GAGTGCGGGAGGTATACGCCAAGGCGGAAGAATTTT...TTCTCTAATCGAGGAAGAATCCGGGATGTTCAGCATGAGCTTCCGCTTGATAAG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENST00000559127.5 ENST00000678029.1 ENST00000678745.1 |
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| CDS-3UTR CCA 90 bp | GATCTTATCAAGCGGAAGCTCATGCTGAACATCCCGGATTCTTCCTCGATTAGAAAAATTCTTCCGCCTTaGCGTATACCTCCCGCACTC | + |
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Preference number: 4 (lower is better) Translates to: DLIKRKLMLNIPDSSSIRKILPP*RIPPAL Trigger: GAGTGCGGGAGGTATACGCCAAGGCGGAAGAATTTT...TCTAATCGAGGAAGAATCCGGGATGTTCAGCATGAGCTTCCGCTTGATAAGATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000559127.5 ENST00000678029.1 ENST00000678745.1 |
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| CDS-3UTR CCA 90 bp | AAATTCCTTCAGGATGGGGGTATGGTTCATAGGAGAGGTCTAAGTCAGCCTCTGCACACAGGTAGTGAGTaGCAAAATTCTTCCGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KFLQDGGMVHRRGLSQPLHTGSE*QNSSAL Trigger: CAAGGCGGAAGAATTTTGCCACTCACTACCTGTGTG...CAGAGGCTGACTTAGACCTCTCCTATGAACCATACCCCCATCCTGAAGGAATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000679094.1 |
||
| CDS-3UTR CCA 90 bp | CAACACTGGGAGGCCAAGGTGGGCAGATCACAAGGTCCAGTTAAAAACCAGCCTTTCTTCTGTATGAGCTaGATCAGTAAACACGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: QHWEAKVGRSQGPVKNQPFFCMS*ISKHAN Trigger: ATTGGCGTGTTTACTGATCCAGCTCATACAGAAGAA...AGGCTGGTTTTTAACTGGACCTTGTGATCTGCCCACCTTGGCCTCCCAGTGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000676533.1 ENST00000679094.1 |
||
| CDS-3UTR TCA 90 bp | GCCCTGAGAAGAAATATTCATCTGCCAGCCTTCTCAAATGAACTCAGTCTCCCCCTAGTAAGGACGACATaGATGCCTAATGGAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALRRNIHLPAFSNELSLPLVRTT*MPNGVP Trigger: AGGAACTCCATTAGGCATTCATGTCGTCCTTACTAG...GGGGAGACTGAGTTCATTTGAGAAGGCTGGCAGATGAATATTTCTTCTCAGGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000676533.1 ENST00000679094.1 |
||
| CDS-3UTR GCA 90 bp | GTGGGCAGATCACAAGGTCCAGTTAAAAACCAGCCTGCCCAATATGGTAAAACCCCATGTGCCAGAAACTaGTCTAAGTGTTTCACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VGRSQGPVKNQPAQYGKTPCARN*SKCFTD Trigger: GTCAGTGAAACACTTAGAGCAGTTTCTGGCACATGG...GGTTTTACCATATTGGGCAGGCTGGTTTTTAACTGGACCTTGTGATCTGCCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000679094.1 |
||
| CDS-3UTR GCA 90 bp | CAACACTGGGAGGCCAAGGTGGGCAGATCACAAGGTCCAGTTAAAAACCAGCCTACTACTGGAATACTCTaGAAAGCGAATACCCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QHWEAKVGRSQGPVKNQPTTGIL*KANTQK Trigger: TTTTTGGGTATTCGCTTTGCAGAGTATTCCAGTAGT...AGGCTGGTTTTTAACTGGACCTTGTGATCTGCCCACCTTGGCCTCCCAGTGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000676533.1 ENST00000679094.1 |
||
| CDS-3UTR CCA 90 bp | CTTATCAAGCGGAAGCTCATGCTGAACATCCCGGATTCTTCCTCGATTAGAGAACACACAGGTAGTGAGTaGCAAAATTCTTCCGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LIKRKLMLNIPDSSSIREHTGSE*QNSSAL Trigger: CAAGGCGGAAGAATTTTGCCACTCACTACCTGTGTG...TTCTCTAATCGAGGAAGAATCCGGGATGTTCAGCATGAGCTTCCGCTTGATAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000559127.5 ENST00000678029.1 ENST00000678745.1 |
||
| CDS-3UTR CCA 90 bp | GCAGTGGCCCTGAGAAGAAATATTCATCTGCCAGCCTTCTCAAATGAACTCAGTATTAGCCAAGTGTGGTaGCAGGCACCTGTAATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AVALRRNIHLPAFSNELSISQVW*QAPVIP Trigger: TGGAATTACAGGTGCCTGCCACCACACTTGGCTAAT...ACTGAGTTCATTTGAGAAGGCTGGCAGATGAATATTTCTTCTCAGGGCCACTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000676533.1 ENST00000679094.1 |
||
| CDS-3UTR TCA 90 bp | GATCACAAGGTCCAGTTAAAAACCAGCCTGCCCAATATGGTAAAACCTCGTCTCCTAGTAAGGACGACATaGATGCCTAATGGAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DHKVQLKTSLPNMVKPRLLVRTT*MPNGVP Trigger: AGGAACTCCATTAGGCATTCATGTCGTCCTTACTAG...GAGACGAGGTTTTACCATATTGGGCAGGCTGGTTTTTAACTGGACCTTGTGATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000676533.1 ENST00000679094.1 |
||
| CDS-3UTR GCA 90 bp | CTTATCAAGCGGAAGCTCATGCTGAACATCCCGGATTCTTCCTCGATTAGAGAACCATGTGCCAGAAACTaGTCTAAGTGTTTCACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LIKRKLMLNIPDSSSIREPCARN*SKCFTD Trigger: GTCAGTGAAACACTTAGAGCAGTTTCTGGCACATGG...TTCTCTAATCGAGGAAGAATCCGGGATGTTCAGCATGAGCTTCCGCTTGATAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000559127.5 ENST00000678745.1 |
||
| CDS-3UTR CCA 90 bp | AAATTTGGAAAAAGGAATCGAAACCTCCGCCTCCTGGGTTCAAGCAATTATCCTAAAATTCTTCCGCCTTaGCGTATACCTCCCGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: KFGKRNRNLRLLGSSNYPKILPP*RIPPAL Trigger: GAGTGCGGGAGGTATACGCCAAGGCGGAAGAATTTT...AGGATAATTGCTTGAACCCAGGAGGCGGAGGTTTCGATTCCTTTTTCCAAATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000559127.5 ENST00000678029.1 |
||
| CDS-3UTR CCA 90 bp | AATTTGGAAAAAGGAATCGAAACCTCCGCCTCCTGGGTTCAAGCAATTATCCTGCACACAGGTAGTGAGTaGCAAAATTCTTCCGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NLEKGIETSASWVQAIILHTGSE*QNSSAL Trigger: CAAGGCGGAAGAATTTTGCCACTCACTACCTGTGTG...CAGGATAATTGCTTGAACCCAGGAGGCGGAGGTTTCGATTCCTTTTTCCAAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000559127.5 ENST00000678029.1 |
||
| CDS-3UTR GCA 90 bp | TTCCAGGAGTTTAAAATCCCATCAGGTGATGATTATAACTGGGTTTTAATGCTACCGGGAGGTAGAGGTTaGAGTGAGCCGAGATCATGC | + |
|
Preference number: 4 (lower is better) Translates to: FQEFKIPSGDDYNWVLMLPGGRG*SEPRSC Trigger: GCATGATCTCGGCTCACTGCAACCTCTACCTCCCGG...TAGCATTAAAACCCAGTTATAATCATCACCTGATGGGATTTTAAACTCCTGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000676533.1 ENST00000679094.1 |
||
| CDS-3UTR CCA 90 bp | AAATTTGGAAAAAGGAATCGAAACCTCCGCCTCCTGGGTTCAAGCAATTATCCTCACACAGGTAGTGAGTaGCAAAATTCTTCCGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KFGKRNRNLRLLGSSNYPHTGSE*QNSSAL Trigger: CAAGGCGGAAGAATTTTGCCACTCACTACCTGTGTG...AGGATAATTGCTTGAACCCAGGAGGCGGAGGTTTCGATTCCTTTTTCCAAATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000559127.5 ENST00000678029.1 |
||
| CDS-3UTR CCA 90 bp | AAATTCCTTCAGGATGGGGGTATGGTTCATAGGAGAGGTCTAAGTCAGCCTCTGTTCTTCTGTATGAGCTaGATCAGTAAACACGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: KFLQDGGMVHRRGLSQPLFFCMS*ISKHAN Trigger: ATTGGCGTGTTTACTGATCCAGCTCATACAGAAGAA...CAGAGGCTGACTTAGACCTCTCCTATGAACCATACCCCCATCCTGAAGGAATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000676533.1 ENST00000679094.1 |
||
| CDS-3UTR GCA 90 bp | AAATTCCTTCAGGATGGGGGTATGGTTCATAGGAGAGGTCTAAGTCAGCCTCTGACTACTGGAATACTCTaGAAAGCGAATACCCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KFLQDGGMVHRRGLSQPLTTGIL*KANTQK Trigger: TTTTTGGGTATTCGCTTTGCAGAGTATTCCAGTAGT...CAGAGGCTGACTTAGACCTCTCCTATGAACCATACCCCCATCCTGAAGGAATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000676533.1 ENST00000679094.1 |
||
| CDS-3UTR GCA 90 bp | AAATTCCTTCAGGATGGGGGTATGGTTCATAGGAGAGGTCTAAGTCAGCCTCTGGAAGAAATATTCATCTaGCAGCCTTCTCAAATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KFLQDGGMVHRRGLSQPLEEIFI*QPSQMN Trigger: GTTCATTTGAGAAGGCTGGCAGATGAATATTTCTTC...CAGAGGCTGACTTAGACCTCTCCTATGAACCATACCCCCATCCTGAAGGAATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000676533.1 ENST00000679094.1 |
||
| CDS-3UTR CCA 90 bp | CTTATCAAGCGGAAGCTCATGCTGAACATCCCGGATTCTTCCTCGATTAGAGAATTCTTCTGTATGAGCTaGATCAGTAAACACGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LIKRKLMLNIPDSSSIREFFCMS*ISKHAN Trigger: ATTGGCGTGTTTACTGATCCAGCTCATACAGAAGAA...TTCTCTAATCGAGGAAGAATCCGGGATGTTCAGCATGAGCTTCCGCTTGATAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678745.1 |
||
| CDS-3UTR GCA 90 bp | GATCTTATCAAGCGGAAGCTCATGCTGAACATCCCGGATTCTTCCTCGATTAGAACTACTGGAATACTCTaGAAAGCGAATACCCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: DLIKRKLMLNIPDSSSIRTTGIL*KANTQK Trigger: TTTTTGGGTATTCGCTTTGCAGAGTATTCCAGTAGT...TCTAATCGAGGAAGAATCCGGGATGTTCAGCATGAGCTTCCGCTTGATAAGATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000559127.5 ENST00000678029.1 ENST00000678745.1 |
||
| CDS-3UTR GCA 90 bp | CTTATCAAGCGGAAGCTCATGCTGAACATCCCGGATTCTTCCTCGATTAGAGAAACTACTGGAATACTCTaGAAAGCGAATACCCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LIKRKLMLNIPDSSSIRETTGIL*KANTQK Trigger: TTTTTGGGTATTCGCTTTGCAGAGTATTCCAGTAGT...TTCTCTAATCGAGGAAGAATCCGGGATGTTCAGCATGAGCTTCCGCTTGATAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000559127.5 ENST00000678029.1 ENST00000678745.1 |
||
| CDS-3UTR GCA 90 bp | TTCCAGGAGTTTAAAATCCCATCAGGTGATGATTATAACTGGGTTTTAATGCTACTGAGGCAGGAGAAATaGTTGAACCCGGGAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: FQEFKIPSGDDYNWVLMLLRQEK*LNPGGR Trigger: TCTACCTCCCGGGTTCAAGCATTTCTCCTGCCTCAG...TAGCATTAAAACCCAGTTATAATCATCACCTGATGGGATTTTAAACTCCTGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000676533.1 ENST00000679094.1 |
||
| CDS-3UTR GCA 90 bp | GCAGTGGCCCTGAGAAGAAATATTCATCTGCCAGCCTTCTCAAATGAACTCAGTGAAGAAATATTCATCTaGCAGCCTTCTCAAATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: AVALRRNIHLPAFSNELSEEIFI*QPSQMN Trigger: GTTCATTTGAGAAGGCTGGCAGATGAATATTTCTTC...ACTGAGTTCATTTGAGAAGGCTGGCAGATGAATATTTCTTCTCAGGGCCACTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000676533.1 ENST00000679094.1 |
||
| CDS-3UTR TCA 90 bp | AAAATCTCATACAGTGACGTACTGAGATTATTCCAGGAGTTTAAAATCCCATCATGGAAAAAGGAATCTTaGCCTCCTGCCAGTAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KISYSDVLRLFQEFKIPSWKKES*PPASRV Trigger: GACCCTACTGGCAGGAGGTCAAGATTCCTTTTTCCA...TGATGGGATTTTAAACTCCTGGAATAATCTCAGTACGTCACTGTATGAGATTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000676533.1 ENST00000679094.1 |
||
| CDS-3UTR TCA 90 bp | ATGATCCTTCTAAAATTCCTTCAGGATGGGGGTATGGTTCATAGGAGAGGTCTACATACAGTGACGTACTaGGATTATTCCAGGAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: MILLKFLQDGGMVHRRGLHTVTY*DYSRSL Trigger: TAAACTCCTGGAATAATCTCAGTACGTCACTGTATG...TAGACCTCTCCTATGAACCATACCCCCATCCTGAAGGAATTTTAGAAGGATCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000676533.1 ENST00000679094.1 |
||
| CDS-3UTR CCA 90 bp | AAAATCTCATACAGTGACGTACTGAGATTATTCCAGGAGTTTAAAATCCCATCAAAAATTCTTCCGCCTTaGCGTATACCTCCCGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: KISYSDVLRLFQEFKIPSKILPP*RIPPAL Trigger: GAGTGCGGGAGGTATACGCCAAGGCGGAAGAATTTT...TGATGGGATTTTAAACTCCTGGAATAATCTCAGTACGTCACTGTATGAGATTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000679094.1 |
||
| CDS-3UTR CCA 90 bp | AAAATCTCATACAGTGACGTACTGAGATTATTCCAGGAGTTTAAAATCCCATCAAAGATTAGCCAAGTGTaGTGGCAGGCACCTGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: KISYSDVLRLFQEFKIPSKISQV*WQAPVI Trigger: AATTACAGGTGCCTGCCACCACACTTGGCTAATCTT...TGATGGGATTTTAAACTCCTGGAATAATCTCAGTACGTCACTGTATGAGATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000676533.1 ENST00000679094.1 |
||
| CDS-3UTR TCA 90 bp | TTCCAGGAGTTTAAAATCCCATCAGGTGATGATTATAACTGGGTTTTAATGCTACATACAGTGACGTACTaGGATTATTCCAGGAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: FQEFKIPSGDDYNWVLMLHTVTY*DYSRSL Trigger: TAAACTCCTGGAATAATCTCAGTACGTCACTGTATG...TAGCATTAAAACCCAGTTATAATCATCACCTGATGGGATTTTAAACTCCTGGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000676533.1 ENST00000679094.1 |
||
| CDS CCA 90 bp | CCGCACTCACGGCCTGGCCTCCGGAGGCTAGACGGTTCGCCGCGCTaGGGAGGCCCCCTCAACCCTCAAGTGCCAGGGCTCTGTCGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PHSRPGLRRLDGSPR*GGPLNPQVPGLCRL Trigger: GAGGCGACAGAGCCCTGGCACTTGAGGGTTGAGGGGGCCTCCCCAGCGCGGCGAACCGTCTAGCCTCCGGAGGCCAGGCCGTGAGTGCGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000260361.9 ENST00000558719.2 ENST00000559127.5 ENST00000678029.1 ENST00000678745.1 ENST00000679094.1 ENST00000679240.1 |
||
| CDS GCA 90 bp | GGGCTCTGTCGCCTCCCCACACCCGGGACACACCAACCGCCGGCCTaGCGCCGCTTACCTCCCCGAGCCTATAGTGTACCTTCCGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GLCRLPTPGTHQPPA*RRLPPRAYSVPSAQ Trigger: CTGGGCGGAAGGTACACTATAGGCTCGGGGAGGTAAGCGGCGGCAGGCCGGCGGTTGGTGTGTCCCGGGTGTGGGGAGGCGACAGAGCCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000260361.9 ENST00000558719.2 ENST00000678745.1 ENST00000679094.1 |
||
| CDS CCA 90 bp | CTACCCGAGGTCACACAGGTAGTGAGTGGCAAAATTCTTCCGCCTTaGCGTATACCTCCCGCACTCACGGCCTGGCCTCCGGAGGCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: LPEVTQVVSGKILPP*RIPPALTAWPPEAR Trigger: TCTAGCCTCCGGAGGCCAGGCCGTGAGTGCGGGAGGTATACGCCAAGGCGGAAGAATTTTGCCACTCACTACCTGTGTGACCTCGGGTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000678029.1 |
||
| CDS CCA 90 bp | TTACCCGAGGTCACACAGGTAGTGAGTGGCAAAATTCTTCCGCCTTaGCGTATACCTCCCGCACTCACGGCCTGGCCTCCGGAGGCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: LPEVTQVVSGKILPP*RIPPALTAWPPEAR Trigger: TCTAGCCTCCGGAGGCCAGGCCGTGAGTGCGGGAGGTATACGCCAAGGCGGAAGAATTTTGCCACTCACTACCTGTGTGACCTCGGGTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000260361.9 ENST00000558719.2 ENST00000559127.5 ENST00000678745.1 ENST00000679094.1 ENST00000679240.1 |
||
| CDS TCA 90 bp | ATAGCCCAATTCTACCTCTCCGGCCCCAGGGATTGGCTCAGAAGTTaGCAATTAACTCAGGTAGTGCCAGGGAGGGCCAGTGACCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: IAQFYLSGPRDWLRS*QLTQVVPGRASDLW Trigger: CCAGAGGTCACTGGCCCTCCCTGGCACTACCTGAGTTAATTGTCAACTTCTGAGCCAATCCCTGGGGCCGGAGAGGTAGAATTGGGCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677477.1 |
||
| CDS-3UTR CAA 90 bp | GTGGGCAGATCACAAGGTCCAGTTAAAAACCAGCCTGCCCAATATGGTAAAACCCAAAATTCTTCCGCCTaGGCGTATACCTCCCGCACT | + |
|
Preference number: 5 (lower is better) Translates to: VGRSQGPVKNQPAQYGKTQNSSA*AYTSRT Trigger: AGTGCGGGAGGTATACGCCAAGGCGGAAGAATTTTG...GGTTTTACCATATTGGGCAGGCTGGTTTTTAACTGGACCTTGTGATCTGCCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000679094.1 |
||
| CDS-3UTR CAA 90 bp | CTTATCAAGCGGAAGCTCATGCTGAACATCCCGGATTCTTCCTCGATTAGAGAACAAAATTCTTCCGCCTaGGCGTATACCTCCCGCACT | + |
|
Preference number: 5 (lower is better) Translates to: LIKRKLMLNIPDSSSIREQNSSA*AYTSRT Trigger: AGTGCGGGAGGTATACGCCAAGGCGGAAGAATTTTG...TTCTCTAATCGAGGAAGAATCCGGGATGTTCAGCATGAGCTTCCGCTTGATAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000559127.5 ENST00000678029.1 ENST00000678745.1 |
||
| CDS-3UTR CAA 90 bp | GATCTTATCAAGCGGAAGCTCATGCTGAACATCCCGGATTCTTCCTCGATTAGACAAAATTCTTCCGCCTaGGCGTATACCTCCCGCACT | + |
|
Preference number: 5 (lower is better) Translates to: DLIKRKLMLNIPDSSSIRQNSSA*AYTSRT Trigger: AGTGCGGGAGGTATACGCCAAGGCGGAAGAATTTTG...TCTAATCGAGGAAGAATCCGGGATGTTCAGCATGAGCTTCCGCTTGATAAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000559127.5 ENST00000678029.1 ENST00000678745.1 |
||
| CDS-3UTR CAA 90 bp | AATTTGGAAAAAGGAATCGAAACCTCCGCCTCCTGGGTTCAAGCAATTATCCTGCAAAATTCTTCCGCCTaGGCGTATACCTCCCGCACT | + |
|
Preference number: 5 (lower is better) Translates to: NLEKGIETSASWVQAIILQNSSA*AYTSRT Trigger: AGTGCGGGAGGTATACGCCAAGGCGGAAGAATTTTG...CAGGATAATTGCTTGAACCCAGGAGGCGGAGGTTTCGATTCCTTTTTCCAAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000559127.5 ENST00000678029.1 |
||
| CDS-3UTR CAA 90 bp | GATCTTATCAAGCGGAAGCTCATGCTGAACATCCCGGATTCTTCCTCGATTAGATCTCAAAAGCACCCCTaGGAATCCTGGATATCATTG | + |
|
Preference number: 5 (lower is better) Translates to: DLIKRKLMLNIPDSSSIRSQKHP*ESWISL Trigger: CAATGATATCCAGGATTCCAAGGGGTGCTTTTGAGA...TCTAATCGAGGAAGAATCCGGGATGTTCAGCATGAGCTTCCGCTTGATAAGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000559127.5 ENST00000678029.1 ENST00000678745.1 |
||
| CDS TCA 90 bp | AGGCATTCCCTGAGGCCAGACCTGCTTCTGGACTTTTCAGTCACGTaGGCCAAGATTATGTTGTTTAAACTAGCTTGTGTTGAGTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RHSLRPDLLLDFSVT*AKIMLFKLACVEFS Trigger: AGAAAACTCAACACAAGCTAGTTTAAACAACATAATCTTGGCTCACGTGACTGAAAAGTCCAGAAGCAGGTCTGGCCTCAGGGAATGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000677477.1 |
||
| CDS TCA 90 bp | AGCAGTGGCCCTGAGAAGAAATATTCATCTGCCAGCCTTCTCAAATaGACTCAGTCTCCCCAGAGTTCCGATTCATTAAAAATGATACAG | + |
|
Preference number: 5 (lower is better) Translates to: SSGPEKKYSSASLLK*TQSPQSSDSLKMIQ Trigger: CTGTATCATTTTTAATGAATCGGAACTCTGGGGAGACTGAGTTCATTTGAGAAGGCTGGCAGATGAATATTTCTTCTCAGGGCCACTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000676533.1 ENST00000679094.1 |
||
| CDS TCA 90 bp | GCCAGAAACTGCTCTAAGTGTTTCACTGACGGCTCACAACAATCCTaGGAGAGGTACTATTATTATTTCAATTATAGAGACGAAGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: ARNCSKCFTDGSQQS*ERYYYYFNYRDEET Trigger: AGTTTCTTCGTCTCTATAATTGAAATAATAATAGTACCTCTCTCAGGATTGTTGTGAGCCGTCAGTGAAACACTTAGAGCAGTTTCTGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000260361.9 ENST00000558719.2 ENST00000559127.5 ENST00000678745.1 ENST00000679094.1 ENST00000679240.1 |
||
| CDS CCA 72 bp | CGGCCTGGCCTCCGGAGGCTAGACGGTTCGCCGCGCTaGGGAGGCCCCCTCAACCCTCAAGTGCCAGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RPGLRRLDGSPR*GGPLNPQVPGL Trigger: GAGCCCTGGCACTTGAGGGTTGAGGGGGCCTCCCCAGCGCGGCGAACCGTCTAGCCTCCGGAGGCCAGGCCG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000260361.9 ENST00000558719.2 ENST00000559127.5 ENST00000678029.1 ENST00000678745.1 ENST00000679094.1 ENST00000679240.1 |
||
| CDS CCA 72 bp | CTTCCGCCTTGGCGTATACCTCCCGCACTCACGGCCTaGCCTCCGGAGGCTAGACGGTTCGCCGCGCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LPPWRIPPALTA*PPEARRFAALG Trigger: CCCCAGCGCGGCGAACCGTCTAGCCTCCGGAGGCCAGGCCGTGAGTGCGGGAGGTATACGCCAAGGCGGAAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000260361.9 ENST00000558719.2 ENST00000559127.5 ENST00000678029.1 ENST00000678745.1 ENST00000679094.1 ENST00000679240.1 |
||
| CDS GCA 72 bp | CGCCTCCCCACACCCGGGACACACCAACCGCCGGCCTaGCGCCGCTTACCTCCCCGAGCCTATAGTGTACCT | + |
|
Preference number: 6 (lower is better) Translates to: RLPTPGTHQPPA*RRLPPRAYSVP Trigger: AGGTACACTATAGGCTCGGGGAGGTAAGCGGCGGCAGGCCGGCGGTTGGTGTGTCCCGGGTGTGGGGAGGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000260361.9 ENST00000558719.2 ENST00000678745.1 ENST00000679094.1 |
||
| CDS CCA 72 bp | GTCACACAGGTAGTGAGTGGCAAAATTCTTCCGCCTTaGCGTATACCTCCCGCACTCACGGCCTGGCCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: VTQVVSGKILPP*RIPPALTAWPP Trigger: CGGAGGCCAGGCCGTGAGTGCGGGAGGTATACGCCAAGGCGGAAGAATTTTGCCACTCACTACCTGTGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000260361.9 ENST00000558719.2 ENST00000559127.5 ENST00000678029.1 ENST00000678745.1 ENST00000679094.1 ENST00000679240.1 |
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| CDS CAA 72 bp | GGTCACACAGGTAGTGAGTGGCAAAATTCTTCCGCCTaGGCGTATACCTCCCGCACTCACGGCCTGGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: GHTGSEWQNSSA*AYTSRTHGLAS Trigger: GGAGGCCAGGCCGTGAGTGCGGGAGGTATACGCCAAGGCGGAAGAATTTTGCCACTCACTACCTGTGTGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000260361.9 ENST00000558719.2 ENST00000559127.5 ENST00000678029.1 ENST00000678745.1 ENST00000679094.1 ENST00000679240.1 |
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| CDS TCA 72 bp | CCATGTGGACAGAACCTAGAGCTGCCTGCCTGTGGGTaGGTTGGGACACCAAGGATTAAGGCAGAGCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: PCGQNLELPACG*VGTPRIKAEPR Trigger: TCTTGGCTCTGCCTTAATCCTTGGTGTCCCAACTCACCCACAGGCAGGCAGCTCTAGGTTCTGTCCACATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677477.1 |
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| CDS TCA 72 bp | CTGAGGCCAGACCTGCTTCTGGACTTTTCAGTCACGTaGGCCAAGATTATGTTGTTTAAACTAGCTTGTGTT | + |
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Preference number: 6 (lower is better) Translates to: LRPDLLLDFSVT*AKIMLFKLACV Trigger: AACACAAGCTAGTTTAAACAACATAATCTTGGCTCACGTGACTGAAAAGTCCAGAAGCAGGTCTGGCCTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677477.1 |
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| CDS TCA 72 bp | CCTGAGAAGAAATATTCATCTGCCAGCCTTCTCAAATaGACTCAGTCTCCCCAGAGTTCCGATTCATTAAAA | + |
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Preference number: 6 (lower is better) Translates to: PEKKYSSASLLK*TQSPQSSDSLK Trigger: TTTTAATGAATCGGAACTCTGGGGAGACTGAGTTCATTTGAGAAGGCTGGCAGATGAATATTTCTTCTCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000676533.1 ENST00000679094.1 |
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| CDS TCA 72 bp | TGCTCTAAGTGTTTCACTGACGGCTCACAACAATCCTaGGAGAGGTACTATTATTATTTCAATTATAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: CSKCFTDGSQQS*ERYYYYFNYRD Trigger: GTCTCTATAATTGAAATAATAATAGTACCTCTCTCAGGATTGTTGTGAGCCGTCAGTGAAACACTTAGAGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000260361.9 ENST00000558719.2 ENST00000559127.5 ENST00000678745.1 ENST00000679094.1 ENST00000679240.1 |
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