Pregenerated sensors for NDUFAB1 (Homo sapiens)
Ensembl gene IDs: ENSG00000004779Ensembl transcript IDs: ENST00000007516.8, ENST00000484769.1, ENST00000562133.5, ENST00000567761.1, ENST00000570319.5
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTTTTGTGAGGACAGCTGACAATCAAGGGAGTTCTATCCAGGAATaGCAGTTCTCAACCTCTCAAAGATCACCACCAGGGCTGGGCCCC | + |
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Preference number: 1 (lower is better) Translates to: AFVRTADNQGSSIQE*QFSTSQRSPPGLGP Trigger: GGGGCCCAGCCCTGGTGGTGATCTTTGAGAGGTTGAGAACTGTCATTCCTGGATAGAACTCCCTTGATTGTCAGCTGTCCTCACAAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570319.5 |
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| 3UTR TCA 90 bp | CAGGTCACTTCAGTGTCTTACCCAGCAGGCTGGGCTTACCTTGGCTaGGTAATTGAGGGAGACAGAGGTCTGTTTCCAGGTTACCCTGTT | + |
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Preference number: 1 (lower is better) Translates to: QVTSVSYPAGWAYLG*VIEGDRGLFPGYPV Trigger: AACAGGGTAACCTGGAAACAGACCTCTGTCTCCCTCAATTACTCAGCCAAGGTAAGCCCAGCCTGCTGGGTAAGACACTGAAGTGACCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000570319.5 |
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| 3UTR CCA 90 bp | TCCAGGAATGACAGTTCTCAACCTCTCAAAGATCACCACCAGGGCTaGGCCCCTTTGAGTGGCAGACAACAGGAAAGGGCTTGCATTTTA | + |
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Preference number: 1 (lower is better) Translates to: SRNDSSQPLKDHHQG*APLSGRQQERACIL Trigger: TAAAATGCAAGCCCTTTCCTGTTGTCTGCCACTCAAAGGGGCCCAGCCCTGGTGGTGATCTTTGAGAGGTTGAGAACTGTCATTCCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000570319.5 |
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| 3UTR TCA 90 bp | TTCAGTGTCTTACCCAGCAGGCTGGGCTTACCTTGGCTGAGTAATTaGGGGAGACAGAGGTCTGTTTCCAGGTTACCCTGTTCAGTACTT | + |
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Preference number: 1 (lower is better) Translates to: FSVLPSRLGLPWLSN*GRQRSVSRLPCSVL Trigger: AAGTACTGAACAGGGTAACCTGGAAACAGACCTCTGTCTCCCTCAATTACTCAGCCAAGGTAAGCCCAGCCTGCTGGGTAAGACACTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570319.5 |
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| 3UTR GCA 90 bp | CAATCTTGTCATAGAGTTTCAATACGTAAAGAACACGGTCCTGGATaGCCTCTAACGTCAAAGGAGGCATGTCGCTATACTGGCGGCACA | + |
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Preference number: 1 (lower is better) Translates to: QSCHRVSIRKEHGPG*PLTSKEACRYTGGT Trigger: TGTGCCGCCAGTATAGCGACATGCCTCCTTTGACGTTAGAGGGCATCCAGGACCGTGTTCTTTACGTATTGAAACTCTATGACAAGATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484769.1 |
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| 3UTR CAA 90 bp | GCGGCACAACTGTGTAACTCTACCAGGAACGTCCCGCAGTCAGCCTaGCAGAATCCGCTTATAGGAAGAGCCTGCCCTCCTTATACGCGG | + |
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Preference number: 2 (lower is better) Translates to: AAQLCNSTRNVPQSA*QNPLIGRACPPYTR Trigger: CCGCGTATAAGGAGGGCAGGCTCTTCCTATAAGCGGATTCTGCAAGGCTGACTGCGGGACGTTCCTGGTAGAGTTACACAGTTGTGCCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484769.1 |
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| 3UTR-3UTR TCA 90 bp | CTACTTAAGAGCCAGGTCACTTCAGTGTCTTACCCAGCAGGCTGGGCTTACCTTAGGGCTGGGCCCCTTTaGGTGGCAGACAACAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: LLKSQVTSVSYPAGWAYLRAGPL*VADNRK Trigger: TTTCCTGTTGTCTGCCACTCAAAGGGGCCCAGCCCT...AAGGTAAGCCCAGCCTGCTGGGTAAGACACTGAAGTGACCTGGCTCTTAAGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570319.5 |
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| 3UTR-3UTR GCA 90 bp | CGGCACAACTGTGTAACTCTACCAGGAACGTCCCGCAGTCAGCCTTGCAGAATCCAGAGTCAGCAAGAATaGCAAAATGTGTCCTCACTG | + |
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Preference number: 2 (lower is better) Translates to: RHNCVTLPGTSRSQPCRIQSQQE*QNVSSL Trigger: CAGTGAGGACACATTTTGGCATTCTTGCTGACTCTG...GATTCTGCAAGGCTGACTGCGGGACGTTCCTGGTAGAGTTACACAGTTGTGCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484769.1 |
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| 3UTR-3UTR TCA 90 bp | TTAAGAGCCAGGTCACTTCAGTGTCTTACCCAGCAGGCTGGGCTTACCTTGGCTTTTTGTGAGGACAGCTaGCAATCAAGGGAGTTCTAT | + |
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Preference number: 2 (lower is better) Translates to: LRARSLQCLTQQAGLTLAFCEDS*QSREFY Trigger: ATAGAACTCCCTTGATTGTCAGCTGTCCTCACAAAA...AGCCAAGGTAAGCCCAGCCTGCTGGGTAAGACACTGAAGTGACCTGGCTCTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000570319.5 |
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| 3UTR-3UTR TCA 90 bp | CCTCTTATACATGAGGCCTCTCTTGCCTACTTAAGAGCCAGGTCACTTCAGTGTCCTTGGCTGAGTAATTaGGGGAGACAGAGGTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: PLIHEASLAYLRARSLQCPWLSN*GRQRSV Trigger: AACAGACCTCTGTCTCCCTCAATTACTCAGCCAAGG...ACACTGAAGTGACCTGGCTCTTAAGTAGGCAAGAGAGGCCTCATGTATAAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570319.5 |
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| 3UTR-3UTR TCA 90 bp | CTACTTAAGAGCCAGGTCACTTCAGTGTCTTACCCAGCAGGCTGGGCTTACCTTAGTTCTATCCAGGAATaGCAGTTCTCAACCTCTCAA | + |
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Preference number: 2 (lower is better) Translates to: LLKSQVTSVSYPAGWAYLSSIQE*QFSTSQ Trigger: TTGAGAGGTTGAGAACTGTCATTCCTGGATAGAACT...AAGGTAAGCCCAGCCTGCTGGGTAAGACACTGAAGTGACCTGGCTCTTAAGTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000570319.5 |
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| 3UTR-3UTR GCA 90 bp | CGTAAAGAACACGGTCCTGGATGCCCTCTAACGTCAAAGGAGGCATGTCGCTATAAAATGTGTCCTCACTaGCAGACATTCGTCACTATC | + |
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Preference number: 2 (lower is better) Translates to: RKEHGPGCPLTSKEACRYKMCPH*QTFVTI Trigger: GATAGTGACGAATGTCTGGCAGTGAGGACACATTTT...ATAGCGACATGCCTCCTTTGACGTTAGAGGGCATCCAGGACCGTGTTCTTTACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484769.1 |
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| 3UTR-3UTR TCA 90 bp | CCTCTTATACATGAGGCCTCTCTTGCCTACTTAAGAGCCAGGTCACTTCAGTGTAATGTTCTGCTTTTGTaGGGACAGCTGACAATCAAG | + |
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Preference number: 2 (lower is better) Translates to: PLIHEASLAYLRARSLQCNVLLL*GQLTIK Trigger: CTTGATTGTCAGCTGTCCTCACAAAAGCAGAACATT...ACACTGAAGTGACCTGGCTCTTAAGTAGGCAAGAGAGGCCTCATGTATAAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570319.5 |
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| 3UTR-3UTR GCA 90 bp | CACATACAATTTAAATACAAGTCCATCAGAATCACTCTGTCAGAGTCAGCAAGAAAAATGTGTCCTCACTaGCAGACATTCGTCACTATC | + |
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Preference number: 2 (lower is better) Translates to: HIQFKYKSIRITLSESARKMCPH*QTFVTI Trigger: GATAGTGACGAATGTCTGGCAGTGAGGACACATTTT...TCTTGCTGACTCTGACAGAGTGATTCTGATGGACTTGTATTTAAATTGTATGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000007516.8 ENST00000484769.1 ENST00000562133.5 |
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| 3UTR-3UTR GCA 90 bp | ACATACAATTTAAATACAAGTCCATCAGAATCACTCTGTCAGAGTCAGCAAGAAAAAATGTGTCCTCACTaGCAGACATTCGTCACTATC | + |
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Preference number: 2 (lower is better) Translates to: TYNLNTSPSESLCQSQQEKMCPH*QTFVTI Trigger: GATAGTGACGAATGTCTGGCAGTGAGGACACATTTT...TTCTTGCTGACTCTGACAGAGTGATTCTGATGGACTTGTATTTAAATTGTATGT 38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENST00000007516.8 ENST00000484769.1 ENST00000562133.5 |
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| 3UTR CCA 72 bp | GACAGTTCTCAACCTCTCAAAGATCACCACCAGGGCTaGGCCCCTTTGAGTGGCAGACAACAGGAAAGGGCT | + |
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Preference number: 3 (lower is better) Translates to: DSSQPLKDHHQG*APLSGRQQERA Trigger: AGCCCTTTCCTGTTGTCTGCCACTCAAAGGGGCCCAGCCCTGGTGGTGATCTTTGAGAGGTTGAGAACTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570319.5 |
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| 3UTR-3UTR CAA 90 bp | CCTCTTATACATGAGGCCTCTCTTGCCTACTTAAGAGCCAGGTCACTTCAGTGTCAGGGCTGGGCCCCTTaGAGTGGCAGACAACAGGAA | + |
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Preference number: 3 (lower is better) Translates to: PLIHEASLAYLRARSLQCQGWAP*SGRQQE Trigger: TTCCTGTTGTCTGCCACTCAAAGGGGCCCAGCCCTG...ACACTGAAGTGACCTGGCTCTTAAGTAGGCAAGAGAGGCCTCATGTATAAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570319.5 |
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| 3UTR TCA 72 bp | AACCTCTCAAAGATCACCACCAGGGCTGGGCCCCTTTaGGTGGCAGACAACAGGAAAGGGCTTGCATTTTAT | + |
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Preference number: 3 (lower is better) Translates to: NLSKITTRAGPL*VADNRKGLAFY Trigger: ATAAAATGCAAGCCCTTTCCTGTTGTCTGCCACTCAAAGGGGCCCAGCCCTGGTGGTGATCTTTGAGAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000570319.5 |
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| 3UTR TCA 72 bp | AGGACAGCTGACAATCAAGGGAGTTCTATCCAGGAATaGCAGTTCTCAACCTCTCAAAGATCACCACCAGGG | + |
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Preference number: 3 (lower is better) Translates to: RTADNQGSSIQE*QFSTSQRSPPG Trigger: CCCTGGTGGTGATCTTTGAGAGGTTGAGAACTGTCATTCCTGGATAGAACTCCCTTGATTGTCAGCTGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000570319.5 |
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| 3UTR-3UTR CAA 90 bp | CTACTTAAGAGCCAGGTCACTTCAGTGTCTTACCCAGCAGGCTGGGCTTACCTTACCCTGTTCAGTACTTaGTACAATGTTCTGCTTTTG | + |
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Preference number: 3 (lower is better) Translates to: LLKSQVTSVSYPAGWAYLTLFST*YNVLLL Trigger: CAAAAGCAGAACATTGTACAAAGTACTGAACAGGGT...AAGGTAAGCCCAGCCTGCTGGGTAAGACACTGAAGTGACCTGGCTCTTAAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570319.5 |
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| 3UTR GCA 72 bp | CATAGAGTTTCAATACGTAAAGAACACGGTCCTGGATaGCCTCTAACGTCAAAGGAGGCATGTCGCTATACT | + |
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Preference number: 3 (lower is better) Translates to: HRVSIRKEHGPG*PLTSKEACRYT Trigger: AGTATAGCGACATGCCTCCTTTGACGTTAGAGGGCATCCAGGACCGTGTTCTTTACGTATTGAAACTCTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484769.1 |
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| CDS-3UTR TCA 90 bp | CGTAAAGAACACGGTCCTGGATGCCCTCTAACGTCAAAGGAGGCATGTCGCTATAGCAGAGAGCGGTGCTaGGAGGCCGGGCCACGGCCA | + |
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Preference number: 4 (lower is better) Translates to: RKEHGPGCPLTSKEACRYSRERC*EAGPRP Trigger: TGGCCGTGGCCCGGCCTCTCAGCACCGCTCTCTGCT...ATAGCGACATGCCTCCTTTGACGTTAGAGGGCATCCAGGACCGTGTTCTTTACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484769.1 |
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| CDS-3UTR GCA 90 bp | CGGCACAACTGTGTAACTCTACCAGGAACGTCCCGCAGTCAGCCTTGCAGAATCACAGGCAGAAGGTGCTaGGCGAGCACTAAGGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: RHNCVTLPGTSRSQPCRITGRRC*ASTKAG Trigger: GCCGGCCTTAGTGCTCGCGCAGCACCTTCTGCCTGT...GATTCTGCAAGGCTGACTGCGGGACGTTCCTGGTAGAGTTACACAGTTGTGCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484769.1 |
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| CDS-3UTR TCA 90 bp | CGTAAAGAACACGGTCCTGGATGCCCTCTAACGTCAAAGGAGGCATGTCGCTATCCGCGGGCAGGCGGCTaGCATAGGCTGAAAGGACAC | + |
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Preference number: 4 (lower is better) Translates to: RKEHGPGCPLTSKEACRYPRAGG*HRLKGH Trigger: GTGTCCTTTCAGCCTATGTCAGCCGCCTGCCCGCGG...ATAGCGACATGCCTCCTTTGACGTTAGAGGGCATCCAGGACCGTGTTCTTTACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484769.1 |
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| CDS-3UTR CCA 90 bp | TTAAGAGCCAGGTCACTTCAGTGTCTTACCCAGCAGGCTGGGCTTACCTTGGCTGATCACCACCAGGGCTaGGCCCCTTTGAGTGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: LRARSLQCLTQQAGLTLADHHQG*APLSGR Trigger: TCTGCCACTCAAAGGGGCCCAGCCCTGGTGGTGATC...AGCCAAGGTAAGCCCAGCCTGCTGGGTAAGACACTGAAGTGACCTGGCTCTTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570319.5 |
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| CDS-3UTR TCA 90 bp | CAATGTTCTGCTTTTGTGAGGACAGCTGACAATCAAGGGAGTTCTATCCAGGAAAGCAGAGAGCGGTGCTaGGAGGCCGGGCCACGGCCA | + |
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Preference number: 4 (lower is better) Translates to: QCSAFVRTADNQGSSIQESRERC*EAGPRP Trigger: TGGCCGTGGCCCGGCCTCTCAGCACCGCTCTCTGCT...TTCCTGGATAGAACTCCCTTGATTGTCAGCTGTCCTCACAAAAGCAGAACATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570319.5 |
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| CDS-3UTR TCA 90 bp | GCCTCTCTTGCCTACTTAAGAGCCAGGTCACTTCAGTGTCTTACCCAGCAGGCTAGGGCTGGGCCCCTTTaGGTGGCAGACAACAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: ASLAYLRARSLQCLTQQARAGPL*VADNRK Trigger: TTTCCTGTTGTCTGCCACTCAAAGGGGCCCAGCCCT...AGCCTGCTGGGTAAGACACTGAAGTGACCTGGCTCTTAAGTAGGCAAGAGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570319.5 |
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| CDS-3UTR GCA 90 bp | CTACTTAAGAGCCAGGTCACTTCAGTGTCTTACCCAGCAGGCTGGGCTTACCTTAGCACTAAGGCCGGCTaGAAAGTCCCGAGCCTCGTC | + |
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Preference number: 4 (lower is better) Translates to: LLKSQVTSVSYPAGWAYLSTKAG*KVPSLV Trigger: GACGAGGCTCGGGACTTTGCAGCCGGCCTTAGTGCT...AAGGTAAGCCCAGCCTGCTGGGTAAGACACTGAAGTGACCTGGCTCTTAAGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000570319.5 |
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| 3UTR CAA 72 bp | CTGTGTAACTCTACCAGGAACGTCCCGCAGTCAGCCTaGCAGAATCCGCTTATAGGAAGAGCCTGCCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: LCNSTRNVPQSA*QNPLIGRACPP Trigger: AGGAGGGCAGGCTCTTCCTATAAGCGGATTCTGCAAGGCTGACTGCGGGACGTTCCTGGTAGAGTTACACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484769.1 |
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| CDS-3UTR CCA 90 bp | ATCAAGGGAGTTCTATCCAGGAATGACAGTTCTCAACCTCTCAAAGATCACCACGTCCCGAGCCTCGTCTaGGTCCCCGCGGAGCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: IKGVLSRNDSSQPLKDHHVPSLV*VPAEQR Trigger: TCTCTGCTCCGCGGGGACCCAGACGAGGCTCGGGAC...GTGGTGATCTTTGAGAGGTTGAGAACTGTCATTCCTGGATAGAACTCCCTTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570319.5 |
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| CDS-3UTR GCA 90 bp | GCCTCTCTTGCCTACTTAAGAGCCAGGTCACTTCAGTGTCTTACCCAGCAGGCTGAACACGGTCCTGGATaGCCTCTAACGTCAAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: ASLAYLRARSLQCLTQQAEHGPG*PLTSKE Trigger: CTCCTTTGACGTTAGAGGGCATCCAGGACCGTGTTC...AGCCTGCTGGGTAAGACACTGAAGTGACCTGGCTCTTAAGTAGGCAAGAGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000570319.5 |
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| CDS-3UTR TCA 90 bp | CATCCTCTTATACATGAGGCCTCTCTTGCCTACTTAAGAGCCAGGTCACTTCAGGCGGCTGACATAGGCTaGAAGGACACGAGACGCCAT | + |
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Preference number: 4 (lower is better) Translates to: HPLIHEASLAYLRARSLQAADIG*KDTRRH Trigger: ATGGCGTCTCGTGTCCTTTCAGCCTATGTCAGCCGC...CTGAAGTGACCTGGCTCTTAAGTAGGCAAGAGAGGCCTCATGTATAAGAGGATG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000570319.5 |
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| CDS-3UTR TCA 90 bp | TTAAGAGCCAGGTCACTTCAGTGTCTTACCCAGCAGGCTGGGCTTACCTTGGCTCCTTGGCTGAGTAATTaGGGGAGACAGAGGTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: LRARSLQCLTQQAGLTLAPWLSN*GRQRSV Trigger: AACAGACCTCTGTCTCCCTCAATTACTCAGCCAAGG...AGCCAAGGTAAGCCCAGCCTGCTGGGTAAGACACTGAAGTGACCTGGCTCTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570319.5 |
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| CDS-3UTR TCA 90 bp | TATCCAGGAATGACAGTTCTCAACCTCTCAAAGATCACCACCAGGGCTGGGCCCTGGGCTTACCTTGGCTaGGTAATTGAGGGAGACAGA | + |
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Preference number: 4 (lower is better) Translates to: YPGMTVLNLSKITTRAGPWAYLG*VIEGDR Trigger: TCTGTCTCCCTCAATTACTCAGCCAAGGTAAGCCCA...GGGCCCAGCCCTGGTGGTGATCTTTGAGAGGTTGAGAACTGTCATTCCTGGATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000570319.5 |
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| CDS-3UTR GCA 90 bp | TGTCATAGAGTTTCAATACGTAAAGAACACGGTCCTGGATGCCCTCTAACGTCAAGCACTAAGGCCGGCTaGAAAGTCCCGAGCCTCGTC | + |
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Preference number: 4 (lower is better) Translates to: CHRVSIRKEHGPGCPLTSSTKAG*KVPSLV Trigger: GACGAGGCTCGGGACTTTGCAGCCGGCCTTAGTGCT...TGACGTTAGAGGGCATCCAGGACCGTGTTCTTTACGTATTGAAACTCTATGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484769.1 |
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| CDS-3UTR TCA 90 bp | TGGGTCAATCTTGTCATAGAGTTTCAATACGTAAAGAACACGGTCCTGGATGCCGCGGCTGACATAGGCTaGAAGGACACGAGACGCCAT | + |
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Preference number: 4 (lower is better) Translates to: WVNLVIEFQYVKNTVLDAAADIG*KDTRRH Trigger: ATGGCGTCTCGTGTCCTTTCAGCCTATGTCAGCCGC...GGCATCCAGGACCGTGTTCTTTACGTATTGAAACTCTATGACAAGATTGACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484769.1 |
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| CDS-3UTR TCA 90 bp | ACATACAATTTAAATACAAGTCCATCAGAATCACTCTGTCAGAGTCAGCAAGAAAGCAGAGAGCGGTGCTaGGAGGCCGGGCCACGGCCA | + |
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Preference number: 4 (lower is better) Translates to: TYNLNTSPSESLCQSQQESRERC*EAGPRP Trigger: TGGCCGTGGCCCGGCCTCTCAGCACCGCTCTCTGCT...TTCTTGCTGACTCTGACAGAGTGATTCTGATGGACTTGTATTTAAATTGTATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000007516.8 ENST00000484769.1 ENST00000562133.5 |
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| CDS-3UTR TCA 90 bp | CACATACAATTTAAATACAAGTCCATCAGAATCACTCTGTCAGAGTCAGCAAGACCGCGGGCAGGCGGCTaGCATAGGCTGAAAGGACAC | + |
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Preference number: 4 (lower is better) Translates to: HIQFKYKSIRITLSESARPRAGG*HRLKGH Trigger: GTGTCCTTTCAGCCTATGTCAGCCGCCTGCCCGCGG...TCTTGCTGACTCTGACAGAGTGATTCTGATGGACTTGTATTTAAATTGTATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000007516.8 ENST00000484769.1 |
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| CDS-3UTR CCA 90 bp | ACATACAATTTAAATACAAGTCCATCAGAATCACTCTGTCAGAGTCAGCAAGAAGTCCCGAGCCTCGTCTaGGTCCCCGCGGAGCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: TYNLNTSPSESLCQSQQEVPSLV*VPAEQR Trigger: TCTCTGCTCCGCGGGGACCCAGACGAGGCTCGGGAC...TTCTTGCTGACTCTGACAGAGTGATTCTGATGGACTTGTATTTAAATTGTATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000007516.8 ENST00000484769.1 ENST00000562133.5 |
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| CDS-3UTR GCA 90 bp | CACATACAATTTAAATACAAGTCCATCAGAATCACTCTGTCAGAGTCAGCAAGAAGCACTAAGGCCGGCTaGAAAGTCCCGAGCCTCGTC | + |
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Preference number: 4 (lower is better) Translates to: HIQFKYKSIRITLSESARSTKAG*KVPSLV Trigger: GACGAGGCTCGGGACTTTGCAGCCGGCCTTAGTGCT...TCTTGCTGACTCTGACAGAGTGATTCTGATGGACTTGTATTTAAATTGTATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000007516.8 ENST00000484769.1 ENST00000562133.5 |
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| CDS-3UTR GCA 90 bp | CACATACAATTTAAATACAAGTCCATCAGAATCACTCTGTCAGAGTCAGCAAGAACTCTACCAGGAACCTaGGCGAGCACTAAGGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: HIQFKYKSIRITLSESARTLPGT*ASTKAG Trigger: GCCGGCCTTAGTGCTCGCGCAGGTTCCTGGTAGAGT...TCTTGCTGACTCTGACAGAGTGATTCTGATGGACTTGTATTTAAATTGTATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000007516.8 |
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| CDS-3UTR TCA 90 bp | CACATACAATTTAAATACAAGTCCATCAGAATCACTCTGTCAGAGTCAGCAAGAGCGGCTGACATAGGCTaGAAGGACACGAGACGCCAT | + |
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Preference number: 4 (lower is better) Translates to: HIQFKYKSIRITLSESARAADIG*KDTRRH Trigger: ATGGCGTCTCGTGTCCTTTCAGCCTATGTCAGCCGC...TCTTGCTGACTCTGACAGAGTGATTCTGATGGACTTGTATTTAAATTGTATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000007516.8 ENST00000484769.1 |
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| CDS-3UTR TCA 90 bp | ATACATGAGGCCTCTCTTGCCTACTTAAGAGCCAGGTCACTTCAGTGTCTTACCAGTTCTATCCAGGAATaGCAGTTCTCAACCTCTCAA | + |
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Preference number: 4 (lower is better) Translates to: IHEASLAYLRARSLQCLTSSIQE*QFSTSQ Trigger: TTGAGAGGTTGAGAACTGTCATTCCTGGATAGAACT...GGTAAGACACTGAAGTGACCTGGCTCTTAAGTAGGCAAGAGAGGCCTCATGTAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000570319.5 |
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| CDS-3UTR TCA 90 bp | ATACATGAGGCCTCTCTTGCCTACTTAAGAGCCAGGTCACTTCAGTGTCTTACCTTTTGTGAGGACAGCTaGCAATCAAGGGAGTTCTAT | + |
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Preference number: 4 (lower is better) Translates to: IHEASLAYLRARSLQCLTFCEDS*QSREFY Trigger: ATAGAACTCCCTTGATTGTCAGCTGTCCTCACAAAA...GGTAAGACACTGAAGTGACCTGGCTCTTAAGTAGGCAAGAGAGGCCTCATGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570319.5 |
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| CDS-3UTR TCA 90 bp | ATACATGAGGCCTCTCTTGCCTACTTAAGAGCCAGGTCACTTCAGTGTCTTACCAATGTTCTGCTTTTGTaGGGACAGCTGACAATCAAG | + |
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Preference number: 4 (lower is better) Translates to: IHEASLAYLRARSLQCLTNVLLL*GQLTIK Trigger: CTTGATTGTCAGCTGTCCTCACAAAAGCAGAACATT...GGTAAGACACTGAAGTGACCTGGCTCTTAAGTAGGCAAGAGAGGCCTCATGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570319.5 |
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| CDS-3UTR GCA 90 bp | ACATACAATTTAAATACAAGTCCATCAGAATCACTCTGTCAGAGTCAGCAAGAAAGCACTAAGGCCGGCTaGAAAGTCCCGAGCCTCGTC | + |
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Preference number: 4 (lower is better) Translates to: TYNLNTSPSESLCQSQQESTKAG*KVPSLV Trigger: GACGAGGCTCGGGACTTTGCAGCCGGCCTTAGTGCT...TTCTTGCTGACTCTGACAGAGTGATTCTGATGGACTTGTATTTAAATTGTATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000007516.8 ENST00000484769.1 ENST00000562133.5 |
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| CDS-3UTR CCA 90 bp | ACATACAATTTAAATACAAGTCCATCAGAATCACTCTGTCAGAGTCAGCAAGAAGGACACGAGACGCCATaGCTACGCCAACCCAGGATG | + |
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Preference number: 4 (lower is better) Translates to: TYNLNTSPSESLCQSQQEGHETP*LRQPRM Trigger: CATCCTGGGTTGGCGTAGCCATGGCGTCTCGTGTCC...TTCTTGCTGACTCTGACAGAGTGATTCTGATGGACTTGTATTTAAATTGTATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000007516.8 |
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| CDS-3UTR GCA 90 bp | TGGGTCAATCTTGTCATAGAGTTTCAATACGTAAAGAACACGGTCCTGGATGCCCAGAGTCAGCAAGAATaGCAAAATGTGTCCTCACTG | + |
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Preference number: 4 (lower is better) Translates to: WVNLVIEFQYVKNTVLDAQSQQE*QNVSSL Trigger: CAGTGAGGACACATTTTGGCATTCTTGCTGACTCTG...GGCATCCAGGACCGTGTTCTTTACGTATTGAAACTCTATGACAAGATTGACCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484769.1 |
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| CDS-3UTR GCA 90 bp | CACATACAATTTAAATACAAGTCCATCAGAATCACTCTGTCAGAGTCAGCAAGAGAACACGGTCCTGGATaGCCTCTAACGTCAAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: HIQFKYKSIRITLSESAREHGPG*PLTSKE Trigger: CTCCTTTGACGTTAGAGGGCATCCAGGACCGTGTTC...TCTTGCTGACTCTGACAGAGTGATTCTGATGGACTTGTATTTAAATTGTATGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000007516.8 ENST00000484769.1 |
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| CDS-3UTR GCA 90 bp | TGGGTCAATCTTGTCATAGAGTTTCAATACGTAAAGAACACGGTCCTGGATGCCAAAATGTGTCCTCACTaGCAGACATTCGTCACTATC | + |
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Preference number: 4 (lower is better) Translates to: WVNLVIEFQYVKNTVLDAKMCPH*QTFVTI Trigger: GATAGTGACGAATGTCTGGCAGTGAGGACACATTTT...GGCATCCAGGACCGTGTTCTTTACGTATTGAAACTCTATGACAAGATTGACCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484769.1 |
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| CDS-3UTR GCA 90 bp | ACATACAATTTAAATACAAGTCCATCAGAATCACTCTGTCAGAGTCAGCAAGAAGAACACGGTCCTGGATaGCCTCTAACGTCAAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: TYNLNTSPSESLCQSQQEEHGPG*PLTSKE Trigger: CTCCTTTGACGTTAGAGGGCATCCAGGACCGTGTTC...TTCTTGCTGACTCTGACAGAGTGATTCTGATGGACTTGTATTTAAATTGTATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000007516.8 ENST00000484769.1 |
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| CDS-3UTR GCA 90 bp | CACATACAATTTAAATACAAGTCCATCAGAATCACTCTGTCAGAGTCAGCAAGACAGAGTCAGCAAGAATaGCAAAATGTGTCCTCACTG | + |
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Preference number: 4 (lower is better) Translates to: HIQFKYKSIRITLSESARQSQQE*QNVSSL Trigger: CAGTGAGGACACATTTTGGCATTCTTGCTGACTCTG...TCTTGCTGACTCTGACAGAGTGATTCTGATGGACTTGTATTTAAATTGTATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000007516.8 ENST00000484769.1 ENST00000562133.5 |
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| CDS-3UTR CCA 90 bp | TGGGTCAATCTTGTCATAGAGTTTCAATACGTAAAGAACACGGTCCTGGATGCCAATTCAAATCCTTATTaGTCAAAGGTCACTTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: WVNLVIEFQYVKNTVLDANSNPY*SKVTWL Trigger: AAGCCAAGTGACCTTTGACCAATAAGGATTTGAATT...GGCATCCAGGACCGTGTTCTTTACGTATTGAAACTCTATGACAAGATTGACCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484769.1 |
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| CDS-3UTR GCA 90 bp | ACATACAATTTAAATACAAGTCCATCAGAATCACTCTGTCAGAGTCAGCAAGAACAGAGTCAGCAAGAATaGCAAAATGTGTCCTCACTG | + |
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Preference number: 4 (lower is better) Translates to: TYNLNTSPSESLCQSQQEQSQQE*QNVSSL Trigger: CAGTGAGGACACATTTTGGCATTCTTGCTGACTCTG...TTCTTGCTGACTCTGACAGAGTGATTCTGATGGACTTGTATTTAAATTGTATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000007516.8 ENST00000484769.1 ENST00000562133.5 |
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| CDS TCA 90 bp | AAGTCCCGAGCCTCGTCTGGGTCCCCGCGGAGCAGAGAGCGGTGCTaGGAGGCCGGGCCACGGCCAGCATCCGGACCCGGGGCAGCGGCG | + |
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Preference number: 5 (lower is better) Translates to: KSRASSGSPRSRERC*EAGPRPASGPGAAA Trigger: CGCCGCTGCCCCGGGTCCGGATGCTGGCCGTGGCCCGGCCTCTCAGCACCGCTCTCTGCTCCGCGGGGACCCAGACGAGGCTCGGGACTT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000007516.8 ENST00000484769.1 ENST00000562133.5 ENST00000570319.5 |
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| CDS CCA 90 bp | ACCTGCGCGAGCACTAAGGCCGGCTGCAAAGTCCCGAGCCTCGTCTaGGTCCCCGCGGAGCAGAGAGCGGTGCTGAGAGGCCGGGCCACG | + |
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Preference number: 5 (lower is better) Translates to: TCASTKAGCKVPSLV*VPAEQRAVLRGRAT Trigger: CGTGGCCCGGCCTCTCAGCACCGCTCTCTGCTCCGCGGGGACCCAGACGAGGCTCGGGACTTTGCAGCCGGCCTTAGTGCTCGCGCAGGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000007516.8 ENST00000570319.5 |
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| CDS CCA 90 bp | TGCTGCGCGAGCACTAAGGCCGGCTGCAAAGTCCCGAGCCTCGTCTaGGTCCCCGCGGAGCAGAGAGCGGTGCTGAGAGGCCGGGCCACG | + |
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Preference number: 5 (lower is better) Translates to: CCASTKAGCKVPSLV*VPAEQRAVLRGRAT Trigger: CGTGGCCCGGCCTCTCAGCACCGCTCTCTGCTCCGCGGGGACCCAGACGAGGCTCGGGACTTTGCAGCCGGCCTTAGTGCTCGCGCAGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484769.1 |
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| CDS CCA 90 bp | AGCTGCGCGAGCACTAAGGCCGGCTGCAAAGTCCCGAGCCTCGTCTaGGTCCCCGCGGAGCAGAGAGCGGTGCTGAGAGGCCGGGCCACG | + |
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Preference number: 5 (lower is better) Translates to: SCASTKAGCKVPSLV*VPAEQRAVLRGRAT Trigger: CGTGGCCCGGCCTCTCAGCACCGCTCTCTGCTCCGCGGGGACCCAGACGAGGCTCGGGACTTTGCAGCCGGCCTTAGTGCTCGCGCAGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562133.5 |
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| CDS TCA 90 bp | GCATCCGGACCCGGGGCAGCGGCGCAAAGGCCGCGGGCAGGCGGCTaGCATAGGCTGAAAGGACACGAGACGCCATGGCTACGCCAACCC | + |
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Preference number: 5 (lower is better) Translates to: ASGPGAAAQRPRAGG*HRLKGHETPWLRQP Trigger: GGGTTGGCGTAGCCATGGCGTCTCGTGTCCTTTCAGCCTATGTCAGCCGCCTGCCCGCGGCCTTTGCGCCGCTGCCCCGGGTCCGGATGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000007516.8 |
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| CDS TCA 90 bp | CCGGGGCAGCGGCGCAAAGGCCGCGGGCAGGCGGCTGACATAGGCTaGAAGGACACGAGACGCCATGGCTACGCCAACCCAGGATGCACT | + |
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Preference number: 5 (lower is better) Translates to: PGQRRKGRGQAADIG*KDTRRHGYANPGCT Trigger: AGTGCATCCTGGGTTGGCGTAGCCATGGCGTCTCGTGTCCTTTCAGCCTATGTCAGCCGCCTGCCCGCGGCCTTTGCGCCGCTGCCCCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000007516.8 |
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| CDS-3UTR CAA 90 bp | TATCCAGGAATGACAGTTCTCAACCTCTCAAAGATCACCACCAGGGCTGGGCCCCAGGGCTGGGCCCCTTaGAGTGGCAGACAACAGGAA | + |
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Preference number: 5 (lower is better) Translates to: YPGMTVLNLSKITTRAGPQGWAP*SGRQQE Trigger: TTCCTGTTGTCTGCCACTCAAAGGGGCCCAGCCCTG...GGGCCCAGCCCTGGTGGTGATCTTTGAGAGGTTGAGAACTGTCATTCCTGGATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000570319.5 |
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| CDS-3UTR CAA 90 bp | CGTAAAGAACACGGTCCTGGATGCCCTCTAACGTCAAAGGAGGCATGTCGCTATCAAAGGTCACTTGGCTaGTTTCCTAGAATTACTTCC | + |
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Preference number: 5 (lower is better) Translates to: RKEHGPGCPLTSKEACRYQRSLG*FPRITS Trigger: GGAAGTAATTCTAGGAAACAAGCCAAGTGACCTTTG...ATAGCGACATGCCTCCTTTGACGTTAGAGGGCATCCAGGACCGTGTTCTTTACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484769.1 |
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| CDS-3UTR CAA 90 bp | CGTAAAGAACACGGTCCTGGATGCCCTCTAACGTCAAAGGAGGCATGTCGCTATTTGGTCAAAGGTCACTaGGCTTGTTTCCTAGAATTA | + |
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Preference number: 5 (lower is better) Translates to: RKEHGPGCPLTSKEACRYLVKGH*ACFLEL Trigger: TAATTCTAGGAAACAAGCCAAGTGACCTTTGACCAA...ATAGCGACATGCCTCCTTTGACGTTAGAGGGCATCCAGGACCGTGTTCTTTACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484769.1 |
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| CDS TCA 90 bp | GCCACCACGTCCCGGCCTCCATTAATTTCTTATCAGCTCAGGCTATaGTATTGCACTTTACACACATCATCTTTCTTCAGCTCTCCAGTA | + |
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Preference number: 5 (lower is better) Translates to: ATTSRPPLISYQLRL*YCTLHTSSFFSSPV Trigger: TACTGGAGAGCTGAAGAAAGATGATGTGTGTAAAGTGCAATATCATAGCCTGAGCTGATAAGAAATTAATGGAGGCCGGGACGTGGTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567761.1 |
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| CDS-3UTR CAA 90 bp | CATCCTCTTATACATGAGGCCTCTCTTGCCTACTTAAGAGCCAGGTCACTTCAGACCCTGTTCAGTACTTaGTACAATGTTCTGCTTTTG | + |
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Preference number: 5 (lower is better) Translates to: HPLIHEASLAYLRARSLQTLFST*YNVLLL Trigger: CAAAAGCAGAACATTGTACAAAGTACTGAACAGGGT...CTGAAGTGACCTGGCTCTTAAGTAGGCAAGAGAGGCCTCATGTATAAGAGGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570319.5 |
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| CDS-3UTR CAA 90 bp | TGGGTCAATCTTGTCATAGAGTTTCAATACGTAAAGAACACGGTCCTGGATGCCCAATTCAAATCCTTATaGGTCAAAGGTCACTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: WVNLVIEFQYVKNTVLDAQFKSL*VKGHLA Trigger: AGCCAAGTGACCTTTGACCAATAAGGATTTGAATTG...GGCATCCAGGACCGTGTTCTTTACGTATTGAAACTCTATGACAAGATTGACCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484769.1 |
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| CDS TCA 72 bp | GCCTCGTCTGGGTCCCCGCGGAGCAGAGAGCGGTGCTaGGAGGCCGGGCCACGGCCAGCATCCGGACCCGGG | + |
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Preference number: 6 (lower is better) Translates to: ASSGSPRSRERC*EAGPRPASGPG Trigger: CCCGGGTCCGGATGCTGGCCGTGGCCCGGCCTCTCAGCACCGCTCTCTGCTCCGCGGGGACCCAGACGAGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000007516.8 ENST00000484769.1 ENST00000562133.5 ENST00000570319.5 |
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| CDS TCA 72 bp | CCCGGGGCAGCGGCGCAAAGGCCGCGGGCAGGCGGCTaGCATAGGCTGAAAGGACACGAGACGCCATGGCTA | + |
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Preference number: 6 (lower is better) Translates to: PGAAAQRPRAGG*HRLKGHETPWL Trigger: TAGCCATGGCGTCTCGTGTCCTTTCAGCCTATGTCAGCCGCCTGCCCGCGGCCTTTGCGCCGCTGCCCCGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000007516.8 ENST00000484769.1 |
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| CDS GCA 72 bp | ACAGGCAGAAGGTGCTGCGCGAGCACTAAGGCCGGCTaGAAAGTCCCGAGCCTCGTCTGGGTCCCCGCGGAG | + |
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Preference number: 6 (lower is better) Translates to: TGRRCCASTKAG*KVPSLVWVPAE Trigger: CTCCGCGGGGACCCAGACGAGGCTCGGGACTTTGCAGCCGGCCTTAGTGCTCGCGCAGCACCTTCTGCCTGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484769.1 |
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| CDS CCA 72 bp | AGCACTAAGGCCGGCTGCAAAGTCCCGAGCCTCGTCTaGGTCCCCGCGGAGCAGAGAGCGGTGCTGAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: STKAGCKVPSLV*VPAEQRAVLRG Trigger: GCCTCTCAGCACCGCTCTCTGCTCCGCGGGGACCCAGACGAGGCTCGGGACTTTGCAGCCGGCCTTAGTGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000007516.8 ENST00000484769.1 ENST00000562133.5 ENST00000570319.5 |
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| CDS TCA 72 bp | CGGCGCAAAGGCCGCGGGCAGGCGGCTGACATAGGCTaGAAGGACACGAGACGCCATGGCTACGCCAACCCA | + |
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Preference number: 6 (lower is better) Translates to: RRKGRGQAADIG*KDTRRHGYANP Trigger: TGGGTTGGCGTAGCCATGGCGTCTCGTGTCCTTTCAGCCTATGTCAGCCGCCTGCCCGCGGCCTTTGCGCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000007516.8 |
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| CDS GCA 72 bp | ACTCTACCAGGAACCTGCGCGAGCACTAAGGCCGGCTaGAAAGTCCCGAGCCTCGTCTGGGTCCCCGCGGAG | + |
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Preference number: 6 (lower is better) Translates to: TLPGTCASTKAG*KVPSLVWVPAE Trigger: CTCCGCGGGGACCCAGACGAGGCTCGGGACTTTGCAGCCGGCCTTAGTGCTCGCGCAGGTTCCTGGTAGAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000007516.8 ENST00000570319.5 |
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| CDS GCA 72 bp | GAATTTACTGAAAGCTGCGCGAGCACTAAGGCCGGCTaGAAAGTCCCGAGCCTCGTCTGGGTCCCCGCGGAG | + |
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Preference number: 6 (lower is better) Translates to: EFTESCASTKAG*KVPSLVWVPAE Trigger: CTCCGCGGGGACCCAGACGAGGCTCGGGACTTTGCAGCCGGCCTTAGTGCTCGCGCAGCTTTCAGTAAATTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562133.5 |
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| CDS CAA 72 bp | CCCGCGCAATTCAAATCCTTATTGGTCAAAGGTCACTaGGCTTGTTTCCTAGAATTACTTCCAGGAGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: PAQFKSLLVKGH*ACFLELLPGVL Trigger: CAGGACTCCTGGAAGTAATTCTAGGAAACAAGCCAAGTGACCTTTGACCAATAAGGATTTGAATTGCGCGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484769.1 |
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| CDS CAA 90 bp | CACGTCCCGGCCTCCATTAATTTCTTATCAGCTCAGGCTATGATATaGCACTTTACACACATCATCTTTCTTCAGCTCTCCAGTATTCTG | + |
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Preference number: 6 (lower is better) Translates to: HVPASINFLSAQAMI*HFTHIIFLQLSSIL Trigger: CAGAATACTGGAGAGCTGAAGAAAGATGATGTGTGTAAAGTGCAATATCATAGCCTGAGCTGATAAGAAATTAATGGAGGCCGGGACGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567761.1 |
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| CDS CAA 72 bp | CCGCATATAAGTGGACCCGCGCAATTCAAATCCTTATaGGTCAAAGGTCACTTGGCTTGTTTCCTAGAATTA | + |
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Preference number: 6 (lower is better) Translates to: PHISGPAQFKSL*VKGHLACFLEL Trigger: TAATTCTAGGAAACAAGCCAAGTGACCTTTGACCAATAAGGATTTGAATTGCGCGGGTCCACTTATATGCGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484769.1 |
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| CDS TCA 72 bp | TCCCGGCCTCCATTAATTTCTTATCAGCTCAGGCTATaGTATTGCACTTTACACACATCATCTTTCTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: SRPPLISYQLRL*YCTLHTSSFFS Trigger: GCTGAAGAAAGATGATGTGTGTAAAGTGCAATATCATAGCCTGAGCTGATAAGAAATTAATGGAGGCCGGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567761.1 |
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| CDS CAA 72 bp | GCCTCCATTAATTTCTTATCAGCTCAGGCTATGATATaGCACTTTACACACATCATCTTTCTTCAGCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: ASINFLSAQAMI*HFTHIIFLQLS Trigger: GGAGAGCTGAAGAAAGATGATGTGTGTAAAGTGCAATATCATAGCCTGAGCTGATAAGAAATTAATGGAGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567761.1 |
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