RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NDUFA9 (Homo sapiens)

Ensembl gene IDs: ENSG00000139180

Ensembl transcript IDs: ENST00000266544.10, ENST00000535050.1, ENST00000535726.5, ENST00000540688.1, ENST00000542369.5, ENST00000544675.1, ENST00000544679.1

Found 319 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCGCTTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTaGCCGGCCACCACCACGTCTGGGAGGTGTACCCAACAGCTCATT +
Preference number: 1 (lower is better)
Translates to: GASARPPLLGSEEPL*PATTTSGRCTQQLI
Trigger: AATGAGCTGTTGGGTACACCTCCCAGACGTGGTGGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAAGCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR CCA 90 bp GGTAAAATTGTTTCCTTAGTCAATGCTACGGCTTCAGTGTTTGTGTaGGGGGCGCCTCCGCCCAGCCAGCCGACCAGTCCGGGAGGTGGG +
Preference number: 1 (lower is better)
Translates to: GKIVSLVNATASVFV*GAPPPSQPTSPGGG
Trigger: CCCACCTCCCGGACTGGTCGGCTGGCTGGGCGGAGGCGCCCCCCACACAAACACTGAAGCCGTAGCATTGACTAAGGAAACAATTTTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR GCA 90 bp ACACCTGCTGTCAAGAAGGCCCAGACATCTGTCAGCAAAGACCCTTaGCTGGTAAGACTGCCCTTCTCACCCCTGGCCCAGTCTTGGAGA +
Preference number: 1 (lower is better)
Translates to: TPAVKKAQTSVSKDP*LVRLPFSPLAQSWR
Trigger: TCTCCAAGACTGGGCCAGGGGTGAGAAGGGCAGTCTTACCAGGCAAGGGTCTTTGCTGACAGATGTCTGGGCCTTCTTGACAGCAGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR GCA 90 bp GGCTCATGGTTCTGCAGGCTGTACAGGAAGCGTCACATAGGCATCTaGTTCTGGGGAGGCTTCAGGAAGCTTCCAGTCATGGCAGTAGGT +
Preference number: 1 (lower is better)
Translates to: GSWFCRLYRKRHIGI*FWGGFRKLPVMAVG
Trigger: ACCTACTGCCATGACTGGAAGCTTCCTGAAGCCTCCCCAGAAGCAGATGCCTATGTGACGCTTCCTGTACAGCCTGCAGAACCATGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR CCA 90 bp TGGTTCTGCAGGCTGTACAGGAAGCGTCACATAGGCATCTGCTTCTaGGGAGGCTTCAGGAAGCTTCCAGTCATGGCAGTAGGTGAAAAG +
Preference number: 1 (lower is better)
Translates to: WFCRLYRKRHIGICF*GGFRKLPVMAVGEK
Trigger: CTTTTCACCTACTGCCATGACTGGAAGCTTCCTGAAGCCTCCCCAGAAGCAGATGCCTATGTGACGCTTCCTGTACAGCCTGCAGAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR GCA 90 bp CCTCAAAAGGAGATAGCACTCCTTTCTCCCACTTGCTGTGGGATGTaGCTAACTTTGGTGGGCACCTTGCTCCAAGCTGCAGGACTACTT +
Preference number: 1 (lower is better)
Translates to: PQKEIALLSPTCCGM*LTLVGTLLQAAGLL
Trigger: AAGTAGTCCTGCAGCTTGGAGCAAGGTGCCCACCAAAGTTAGGCACATCCCACAGCAAGTGGGAGAAAGGAGTGCTATCTCCTTTTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR GCA 90 bp CCCACTGCAATTGCTCATGCTGTTCTCTTCCACAGCATGAATGACTaGTTCCTCCTCACCCCGGTCCAACACACACATTTCAGCAGGTTA +
Preference number: 1 (lower is better)
Translates to: PTAIAHAVLFHSMND*FLLTPVQHTHFSRL
Trigger: TAACCTGCTGAAATGTGTGTGTTGGACCGGGGTGAGGAGGAAGCAGTCATTCATGCTGTGGAAGAGAACAGCATGAGCAATTGCAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR CCA 90 bp AATGTAACCTCAAAAGGAGATAGCACTCCTTTCTCCCACTTGCTGTaGGATGTGCCTAACTTTGGTGGGCACCTTGCTCCAAGCTGCAGG +
Preference number: 1 (lower is better)
Translates to: NVTSKGDSTPFSHLL*DVPNFGGHLAPSCR
Trigger: CCTGCAGCTTGGAGCAAGGTGCCCACCAAAGTTAGGCACATCCCACAGCAAGTGGGAGAAAGGAGTGCTATCTCCTTTTGAGGTTACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR TCA 90 bp ATTCATGCCCCACTGCAATTGCTCATGCTGTTCTCTTCCACAGCATaGATGACTGCTTCCTCCTCACCCCGGTCCAACACACACATTTCA +
Preference number: 1 (lower is better)
Translates to: IHAPLQLLMLFSSTA*MTASSSPRSNTHIS
Trigger: TGAAATGTGTGTGTTGGACCGGGGTGAGGAGGAAGCAGTCATTCATGCTGTGGAAGAGAACAGCATGAGCAATTGCAGTGGGGCATGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR TCA 90 bp CTCCCACTAGGCCCCAACTCCAACACTGGAGATTACATTGCAACATaGGATTTGGGTGGGGACATCCAAACCACATCACCAATATTAGGC +
Preference number: 1 (lower is better)
Translates to: LPLGPNSNTGDYIAT*DLGGDIQTTSPILG
Trigger: GCCTAATATTGGTGATGTGGTTTGGATGTCCCCACCCAAATCTCATGTTGCAATGTAATCTCCAGTGTTGGAGTTGGGGCCTAGTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR CCA 90 bp ATCATATACTATTACTTGTCAGCCCACACAATCCCACCTATGCTCTaGATTCTGGCCCTTCCATTCCCTCTAGGGCTAGGCACCACAAGT +
Preference number: 1 (lower is better)
Translates to: IIYYYLSAHTIPPML*ILALPFPLGLGTTS
Trigger: ACTTGTGGTGCCTAGCCCTAGAGGGAATGGAAGGGCCAGAATCCAGAGCATAGGTGGGATTGTGTGGGCTGACAAGTAATAGTATATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR TCA 90 bp ACAACCCAGGACTGTCTTTCTCAAGGACCCAGGGGAACCATTCTCTaGAATGTAACCTCAAAAGGAGATAGCACTCCTTTCTCCCACTTG +
Preference number: 1 (lower is better)
Translates to: TTQDCLSQGPRGTIL*NVTSKGDSTPFSHL
Trigger: CAAGTGGGAGAAAGGAGTGCTATCTCCTTTTGAGGTTACATTTCAGAGAATGGTTCCCCTGGGTCCTTGAGAAAGACAGTCCTGGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR GCA 90 bp TGGAACTCATATTCGAAGCCAAATCTGTATGGAACTCAACTGCTCTaGATCACCTCCAAGGTAAAGGTTAAACTCGCTTGTGCCCCTCCC +
Preference number: 1 (lower is better)
Translates to: WNSYSKPNLYGTQLL*ITSKVKVKLACAPP
Trigger: GGGAGGGGCACAAGCGAGTTTAACCTTTACCTTGGAGGTGATGCAGAGCAGTTGAGTTCCATACAGATTTGGCTTCGAATATGAGTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR CCA 90 bp CCCCAACTCCAACACTGGAGATTACATTGCAACATGAGATTTGGGTaGGGACATCCAAACCACATCACCAATATTAGGCACCTGACTTCC +
Preference number: 1 (lower is better)
Translates to: PQLQHWRLHCNMRFG*GHPNHITNIRHLTS
Trigger: GGAAGTCAGGTGCCTAATATTGGTGATGTGGTTTGGATGTCCCCACCCAAATCTCATGTTGCAATGTAATCTCCAGTGTTGGAGTTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR CCA 90 bp AAGGGCATCGGGCTGGCCTCAGATAGCTCAGATCCAAGAAGACTGTaGAATTACTGCAAGGGGTTTGAGAATCTATGGACAATGTTTTTC +
Preference number: 1 (lower is better)
Translates to: KGIGLASDSSDPRRL*NYCKGFENLWTMFF
Trigger: GAAAAACATTGTCCATAGATTCTCAAACCCCTTGCAGTAATTCCACAGTCTTCTTGGATCTGAGCTATCTGAGGCCAGCCCGATGCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR TCA 90 bp GTGGGGTCAGCAACCTGGATTAATAACAGGGATCACACTGAACTCTaGTACAGCTCTTCTGTATGGCAGTGCTTCTCATACTGTAATGTG +
Preference number: 1 (lower is better)
Translates to: VGSATWINNRDHTEL*YSSSVWQCFSYCNV
Trigger: CACATTACAGTATGAGAAGCACTGCCATACAGAAGAGCTGTATCAGAGTTCAGTGTGATCCCTGTTATTAATCCAGGTTGCTGACCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR TCA 90 bp ATGATAATGGGATGGGTTTACAGTCTTGCAGGCTCAAATCAACTGTaGGAATCAGGTAATGTGCAACCTGAATCCCTAGAAAGGTGTGGC +
Preference number: 1 (lower is better)
Translates to: MIMGWVYSLAGSNQL*ESGNVQPESLERCG
Trigger: GCCACACCTTTCTAGGGATTCAGGTTGCACATTACCTGATTCTCACAGTTGATTTGAGCCTGCAAGACTGTAAACCCATCCCATTATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR TCA 90 bp GTCTTTGTCCAGAGTCTAGATTCCAGACAATGCATAGTTTTCCACTaGAGTACAATGGGATCTCCCCCTACACTTCCATTTCCAAGTCCT +
Preference number: 1 (lower is better)
Translates to: VFVQSLDSRQCIVFH*STMGSPPTLPFPSP
Trigger: AGGACTTGGAAATGGAAGTGTAGGGGGAGATCCCATTGTACTTCAGTGGAAAACTATGCATTGTCTGGAATCTAGACTCTGGACAAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR GCA 90 bp GGGCTGGCCTCAGATAGCTCAGATCCAAGAAGACTGTGGAATTACTaGAAGGGGTTTGAGAATCTATGGACAATGTTTTTCTATATATGT +
Preference number: 1 (lower is better)
Translates to: GLASDSSDPRRLWNY*KGFENLWTMFFYIC
Trigger: ACATATATAGAAAAACATTGTCCATAGATTCTCAAACCCCTTGCAGTAATTCCACAGTCTTCTTGGATCTGAGCTATCTGAGGCCAGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR GCA 90 bp AAGAATTATTTTGCTCTGCTATCAGTTACCTACAGCTTACAGAGTTaGAAGATAGCTCCCATAGAATCAAAATCAAACAGCCAGGAAGGA +
Preference number: 1 (lower is better)
Translates to: KNYFALLSVTYSLQS*KIAPIESKSNSQEG
Trigger: TCCTTCCTGGCTGTTTGATTTTGATTCTATGGGAGCTATCTTGCAACTCTGTAAGCTGTAGGTAACTGATAGCAGAGCAAAATAATTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR GCA 90 bp TCTACGCTAAGACACAATGTACACGTCTATAGACAAGAATTATTTTaGTCTGCTATCAGTTACCTACAGCTTACAGAGTTGCAAGATAGC +
Preference number: 1 (lower is better)
Translates to: STLRHNVHVYRQELF*SAISYLQLTELQDS
Trigger: GCTATCTTGCAACTCTGTAAGCTGTAGGTAACTGATAGCAGAGCAAAATAATTCTTGTCTATAGACGTGTACATTGTGTCTTAGCGTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR CCA 90 bp ACACTGTACTGGTGGGATTTGCCAACACTAAACCAAATGTTCATCTaGGTCTTGGCTGCAATTTTAAGAACTTCATTAGAAGGTCATAAT +
Preference number: 1 (lower is better)
Translates to: TLYWWDLPTLNQMFI*VLAAILRTSLEGHN
Trigger: ATTATGACCTTCTAATGAAGTTCTTAAAATTGCAGCCAAGACCCAGATGAACATTTGGTTTAGTGTTGGCAAATCCCACCAGTACAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR CCA 90 bp CACAAGAATCTTTTCAAGTTTAAGTCTCTCCTTACTTCATTCTCTTaGATTTTCCTTCACAGGAAGGGTTTCTTCAAATACGCCCTCCAT +
Preference number: 1 (lower is better)
Translates to: HKNLFKFKSLLTSFS*IFLHRKGFFKYALH
Trigger: ATGGAGGGCGTATTTGAAGAAACCCTTCCTGTGAAGGAAAATCCAAGAGAATGAAGTAAGGAGAGACTTAAACTTGAAAAGATTCTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR GCA 90 bp GCTTCAGGTACTCCTTTATGGCAATACAAAATGGACTCACACACATaGTATCGTATACTACTGCTATCATATACTATGCTATCATATACT +
Preference number: 1 (lower is better)
Translates to: ASGTPLWQYKMDSHT*YRILLLSYTMLSYT
Trigger: AGTATATGATAGCATAGTATATGATAGCAGTAGTATACGATAGCATGTGTGTGAGTCCATTTTGTATTGCCATAAAGGAGTACCTGAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CCA 90 bp CAAGAAGGCCCAGACATCTGTCAGCAAAGACCCTTGCCTGGTAAGACTGCCCTTGACCAGTCCGGGAGGTaGGGGGCGCTTCTGCCCGGC +
Preference number: 2 (lower is better)
Translates to: QEGPDICQQRPLPGKTALDQSGR*GALLPG
Trigger: GCCGGGCAGAAGCGCCCCCCACCTCCCGGACTGGTC...AAGGGCAGTCTTACCAGGCAAGGGTCTTTGCTGACAGATGTCTGGGCCTTCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR GCA 90 bp GTTCTGCAGGCTGTACAGGAAGCGTCACATAGGCATCTGCTTCTGGGGAGGCTTCACAGCATGAATGACTaGTTCCTCCTCACCCCGGTC +
Preference number: 2 (lower is better)
Translates to: VLQAVQEASHRHLLLGRLHSMND*FLLTPV
Trigger: GACCGGGGTGAGGAGGAAGCAGTCATTCATGCTGTG...AAGCCTCCCCAGAAGCAGATGCCTATGTGACGCTTCCTGTACAGCCTGCAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR GCA 90 bp CAAGAAGGCCCAGACATCTGTCAGCAAAGACCCTTGCCTGGTAAGACTGCCCTTCGTCACATAGGCATCTaGTTCTGGGGAGGCTTCAGG +
Preference number: 2 (lower is better)
Translates to: QEGPDICQQRPLPGKTALRHIGI*FWGGFR
Trigger: CCTGAAGCCTCCCCAGAAGCAGATGCCTATGTGACG...AAGGGCAGTCTTACCAGGCAAGGGTCTTTGCTGACAGATGTCTGGGCCTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR TCA 90 bp CAAGAAGGCCCAGACATCTGTCAGCAAAGACCCTTGCCTGGTAAGACTGCCCTTTACCCAACAGCTCATTaGGAACGGGCCATGATGACG +
Preference number: 2 (lower is better)
Translates to: QEGPDICQQRPLPGKTALYPTAH*ERAMMT
Trigger: CGTCATCATGGCCCGTTCTCAATGAGCTGTTGGGTA...AAGGGCAGTCTTACCAGGCAAGGGTCTTTGCTGACAGATGTCTGGGCCTTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR CAA 90 bp GAGATAGCACTCCTTTCTCCCACTTGCTGTGGGATGTGCCTAACTTaGGTGGGCACCTTGCTCCAAGCTGCAGGACTACTTCCTGTCATA +
Preference number: 2 (lower is better)
Translates to: EIALLSPTCCGMCLT*VGTLLQAAGLLPVI
Trigger: TATGACAGGAAGTAGTCCTGCAGCTTGGAGCAAGGTGCCCACCAAAGTTAGGCACATCCCACAGCAAGTGGGAGAAAGGAGTGCTATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR GCA 90 bp GCTCGCATTAGGGTACTAAAAGATTTCCCCCATCAAGATGGCCTTCATGCTCCCGCCCAGCCCGGGTTCTaGATTTCTAACAAGCCCCAA +
Preference number: 2 (lower is better)
Translates to: ARIRVLKDFPHQDGLHAPAQPGF*ISNKPQ
Trigger: TTGGGGCTTGTTAGAAATGCAGAACCCGGGCTGGGC...GGGAGCATGAAGGCCATCTTGATGGGGGAAATCTTTTAGTACCCTAATGCGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR GCA 90 bp GTTCTGCAGGCTGTACAGGAAGCGTCACATAGGCATCTGCTTCTGGGGAGGCTTGGAACTCAACTGCTCTaGATCACCTCCAAGGTAAAG +
Preference number: 2 (lower is better)
Translates to: VLQAVQEASHRHLLLGRLGTQLL*ITSKVK
Trigger: CTTTACCTTGGAGGTGATGCAGAGCAGTTGAGTTCC...AAGCCTCCCCAGAAGCAGATGCCTATGTGACGCTTCCTGTACAGCCTGCAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR TCA 90 bp GACATACATCTTCCCTCAGCCTCTTGCCAGTTTTACAACCCAGGACTGTCTTTCCTGGGCCCTCCTTCCTaGGACTCTGATTCAGTAGGT +
Preference number: 2 (lower is better)
Translates to: DIHLPSASCQFYNPGLSFLGPPS*DSDSVG
Trigger: ACCTACTGAATCAGAGTCTCAGGAAGGAGGGCCCAG...GAAAGACAGTCCTGGGTTGTAAAACTGGCAAGAGGCTGAGGGAAGATGTATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR GCA 90 bp GTTCTGCAGGCTGTACAGGAAGCGTCACATAGGCATCTGCTTCTGGGGAGGCTTGTCATAATTCCTAAGTaGTGGCACTGCTGGCATAGA +
Preference number: 2 (lower is better)
Translates to: VLQAVQEASHRHLLLGRLVIIPK*WHCWHR
Trigger: TCTATGCCAGCAGTGCCAGCACTTAGGAATTATGAC...AAGCCTCCCCAGAAGCAGATGCCTATGTGACGCTTCCTGTACAGCCTGCAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR GCA 90 bp CAGCAACCTGGATTAATAACAGGGATCACACTGAACTCTGATACAGCTCTTCTGAGGTGTGAGCCACTGTaGCCAGCCCGGGTTCTGCAT +
Preference number: 2 (lower is better)
Translates to: QQPGLITGITLNSDTALLRCEPL*PARVLH
Trigger: ATGCAGAACCCGGGCTGGGCACAGTGGCTCACACCT...CAGAAGAGCTGTATCAGAGTTCAGTGTGATCCCTGTTATTAATCCAGGTTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR GCA 90 bp GTTCTGCAGGCTGTACAGGAAGCGTCACATAGGCATCTGCTTCTGGGGAGGCTTTCATTCATGCCCCACTaGAATTGCTCATGCTGTTCT +
Preference number: 2 (lower is better)
Translates to: VLQAVQEASHRHLLLGRLSFMPH*NCSCCS
Trigger: AGAACAGCATGAGCAATTGCAGTGGGGCATGAATGA...AAGCCTCCCCAGAAGCAGATGCCTATGTGACGCTTCCTGTACAGCCTGCAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CCA 90 bp GTTCTGCAGGCTGTACAGGAAGCGTCACATAGGCATCTGCTTCTGGGGAGGCTTATAATTCCTAAGTGCTaGCACTGCTGGCATAGAAGC +
Preference number: 2 (lower is better)
Translates to: VLQAVQEASHRHLLLGRLIIPKC*HCWHRS
Trigger: GCTTCTATGCCAGCAGTGCCAGCACTTAGGAATTAT...AAGCCTCCCCAGAAGCAGATGCCTATGTGACGCTTCCTGTACAGCCTGCAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR GCA 90 bp GCTCGCATTAGGGTACTAAAAGATTTCCCCCATCAAGATGGCCTTCATGCTCCCCCACCCACTCATTCATaGCCCACTGCAATTGCTCAT +
Preference number: 2 (lower is better)
Translates to: ARIRVLKDFPHQDGLHAPPPTHS*PTAIAH
Trigger: ATGAGCAATTGCAGTGGGGCATGAATGAGTGGGTGG...GGGAGCATGAAGGCCATCTTGATGGGGGAAATCTTTTAGTACCCTAATGCGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR GCA 90 bp TTCTTCAAATACGCCCTCCATTCCACTATACCTCCCATTCACTCCAAGACCTTCCCAACTCACGGACTCTaGCTCCCACTCATAACCACC +
Preference number: 2 (lower is better)
Translates to: FFKYALHSTIPPIHSKTFPTHGL*LPLITT
Trigger: GGTGGTTATGAGTGGGAGGCAGAGTCCGTGAGTTGG...GAAGGTCTTGGAGTGAATGGGAGGTATAGTGGAATGGAGGGCGTATTTGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CCA 90 bp TTCTTCAAATACGCCCTCCATTCCACTATACCTCCCATTCACTCCAAGACCTTCTCTGTGCCTAATGGCTaGCTTATGGCCAGGAGGGGT +
Preference number: 2 (lower is better)
Translates to: FFKYALHSTIPPIHSKTFSVPNG*LMARRG
Trigger: ACCCCTCCTGGCCATAAGCCAGCCATTAGGCACAGA...GAAGGTCTTGGAGTGAATGGGAGGTATAGTGGAATGGAGGGCGTATTTGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CCA 90 bp AAAAGAGGTTTAATTGGCTCATGGTTCTGCAGGCTGTACAGGAAGCGTCACATAGGGACTATATACAGGTaGGCCCCACCATGCCTGGCT +
Preference number: 2 (lower is better)
Translates to: KRGLIGSWFCRLYRKRHIGTIYR*APPCLA
Trigger: AGCCAGGCATGGTGGGGCCCACCTGTATATAGTCCC...TATGTGACGCTTCCTGTACAGCCTGCAGAACCATGAGCCAATTAAACCTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR TCA 90 bp GCCCAGCTCCCAGTTACTTGTCATATGCAACCTCCATACACTGAGAGGGTGACACATCTCCTTTGCATGTaGAGAGAATCTATCTCCACC +
Preference number: 2 (lower is better)
Translates to: AQLPVTCHMQPPYTERVTHLLCM*RESIST
Trigger: GGTGGAGATAGATTCTCTTCACATGCAAAGGAGATG...TGTCACCCTCTCAGTGTATGGAGGTTGCATATGACAAGTAACTGGGAGCTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR GCA 90 bp TTCTTCAAATACGCCCTCCATTCCACTATACCTCCCATTCACTCCAAGACCTTCGCTCACTGCAACCTCTaGCTCCCAGGTTTCAGTGAT +
Preference number: 2 (lower is better)
Translates to: FFKYALHSTIPPIHSKTFAHCNL*LPGFSD
Trigger: ATCACTGAAACCTGGGAGGCAGAGGTTGCAGTGAGC...GAAGGTCTTGGAGTGAATGGGAGGTATAGTGGAATGGAGGGCGTATTTGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CCA 90 bp AATGATAATGGCTCACATTTACTTAGTTCTTATTATGTGCAGGGCTCAGCATTTCCCGGCCGCCCCTACTaGGAAGTGAGGAGCCCCTCT +
Preference number: 2 (lower is better)
Translates to: NDNGSHLLSSYYVQGSAFPGRPY*EVRSPS
Trigger: AGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGG...AAATGCTGAGCCCTGCACATAATAAGAACTAAGTAAATGTGAGCCATTATCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CCA 90 bp CAGACAATGCATAGTTTTCCACTGAAGTACAATGGGATCTCCCCCTACACTTCCGACAGCCCCTATAAATaGAGACTCAGCCCATGCCTC +
Preference number: 2 (lower is better)
Translates to: QTMHSFPLKYNGISPYTSDSPYK*RLSPCL
Trigger: GAGGCATGGGCTGAGTCTCCATTTATAGGGGCTGTC...GGAAGTGTAGGGGGAGATCCCATTGTACTTCAGTGGAAAACTATGCATTGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CCA 90 bp AAAAGAGGTTTAATTGGCTCATGGTTCTGCAGGCTGTACAGGAAGCGTCACATACCTCAGTCTCCCTCCTaGGCTGGGACTATATACAGG +
Preference number: 2 (lower is better)
Translates to: KRGLIGSWFCRLYRKRHIPQSPS*AGTIYR
Trigger: CCTGTATATAGTCCCAGCCCAGGAGGGAGACTGAGG...TATGTGACGCTTCCTGTACAGCCTGCAGAACCATGAGCCAATTAAACCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR TCA 90 bp GTCTTCTTGGATCCCAGCTGTGGGGCAGAGAGGAAATTTAACGCTTTAATTATTGAACTCCTAACCTCATaGTCCACCCCCATCAGCCTC +
Preference number: 2 (lower is better)
Translates to: VFLDPSCGAERKFNALIIELLTS*STPISL
Trigger: GAGGCTGATGGGGGTGGATCATGAGGTTAGGAGTTC...AATAATTAAAGCGTTAAATTTCCTCTCTGCCCCACAGCTGGGATCCAAGAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR GCA 90 bp GTCTTCTTGGATCCCAGCTGTGGGGCAGAGAGGAAATTTAACGCTTTAATTATTGGGTGTGGTGGCTCATaGCAAGCAGATGTTAGTGCC +
Preference number: 2 (lower is better)
Translates to: VFLDPSCGAERKFNALIIGCGGS*QADVSA
Trigger: GGCACTAACATCTGCTTGGCATGAGCCACCACACCC...AATAATTAAAGCGTTAAATTTCCTCTCTGCCCCACAGCTGGGATCCAAGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CCA 90 bp GCCCAGCTCCCAGTTACTTGTCATATGCAACCTCCATACACTGAGAGGGTGACAGATCCAAGAAGACTGTaGAATTACTGCAAGGGGTTT +
Preference number: 2 (lower is better)
Translates to: AQLPVTCHMQPPYTERVTDPRRL*NYCKGF
Trigger: AAACCCCTTGCAGTAATTCCACAGTCTTCTTGGATC...TGTCACCCTCTCAGTGTATGGAGGTTGCATATGACAAGTAACTGGGAGCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CCA 90 bp GTTCTGCAGGCTGTACAGGAAGCGTCACATAGGCATCTGCTTCTGGGGAGGCTTAACCAAATGTTCATCTaGGTCTTGGCTGCAATTTTA +
Preference number: 2 (lower is better)
Translates to: VLQAVQEASHRHLLLGRLNQMFI*VLAAIL
Trigger: TAAAATTGCAGCCAAGACCCAGATGAACATTTGGTT...AAGCCTCCCCAGAAGCAGATGCCTATGTGACGCTTCCTGTACAGCCTGCAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CCA 90 bp CAAGAAGGCCCAGACATCTGTCAGCAAAGACCCTTGCCTGGTAAGACTGCCCTTCAGGAAACAAATGTATaGACTCAGATGGGCATGATA +
Preference number: 2 (lower is better)
Translates to: QEGPDICQQRPLPGKTALQETNV*TQMGMI
Trigger: TATCATGCCCATCTGAGTCCATACATTTGTTTCCTG...AAGGGCAGTCTTACCAGGCAAGGGTCTTTGCTGACAGATGTCTGGGCCTTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR CAA 90 bp AATTATTTGAGTTCCCCTTTGAGACATACATCTTCCCTCAGCCTCTaGCCAGTTTTACAACCCAGGACTGTCTTTCTCAAGGACCCAGGG +
Preference number: 2 (lower is better)
Translates to: NYLSSPLRHTSSLSL*PVLQPRTVFLKDPG
Trigger: CCCTGGGTCCTTGAGAAAGACAGTCCTGGGTTGTAAAACTGGCAAGAGGCTGAGGGAAGATGTATGTCTCAAAGGGGAACTCAAATAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR TCA 90 bp CAGACAATGCATAGTTTTCCACTGAAGTACAATGGGATCTCCCCCTACACTTCCTGCTGGCATAGAAGCTaGAGCATCTCCTTTGCATGT +
Preference number: 2 (lower is better)
Translates to: QTMHSFPLKYNGISPYTSCWHRS*SISFAC
Trigger: ACATGCAAAGGAGATGCTTCAGCTTCTATGCCAGCA...GGAAGTGTAGGGGGAGATCCCATTGTACTTCAGTGGAAAACTATGCATTGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR TCA 90 bp GACATACATCTTCCCTCAGCCTCTTGCCAGTTTTACAACCCAGGACTGTCTTTCGGAGTAGCTCACTGTTaGCCGTTTTGGGATAAAAAG +
Preference number: 2 (lower is better)
Translates to: DIHLPSASCQFYNPGLSFGVAHC*PFWDKK
Trigger: CTTTTTATCCCAAAACGGTCAACAGTGAGCTACTCC...GAAAGACAGTCCTGGGTTGTAAAACTGGCAAGAGGCTGAGGGAAGATGTATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR TCA 90 bp GACATACATCTTCCCTCAGCCTCTTGCCAGTTTTACAACCCAGGACTGTCTTTCCTAAAATGCAGATTCTaGTTCAACACGCCTGGGACA +
Preference number: 2 (lower is better)
Translates to: DIHLPSASCQFYNPGLSFLKCRF*FNTPGT
Trigger: TGTCCCAGGCGTGTTGAATCAGAATCTGCATTTTAG...GAAAGACAGTCCTGGGTTGTAAAACTGGCAAGAGGCTGAGGGAAGATGTATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR TCA 90 bp CAAGAAGGCCCAGACATCTGTCAGCAAAGACCCTTGCCTGGTAAGACTGCCCTTCCTCACACTTTTAAATaGCCAGATCTTGTAAGAACT +
Preference number: 2 (lower is better)
Translates to: QEGPDICQQRPLPGKTALPHTFK*PDLVRT
Trigger: AGTTCTTACAAGATCTGGTCATTTAAAAGTGTGAGG...AAGGGCAGTCTTACCAGGCAAGGGTCTTTGCTGACAGATGTCTGGGCCTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR GCA 90 bp CAAGAAGGCCCAGACATCTGTCAGCAAAGACCCTTGCCTGGTAAGACTGCCCTTTCTCATACTGTAATGTaGATACAAATCTCCTGGAGA +
Preference number: 2 (lower is better)
Translates to: QEGPDICQQRPLPGKTALSHTVM*IQISWR
Trigger: TCTCCAGGAGATTTGTATGCACATTACAGTATGAGA...AAGGGCAGTCTTACCAGGCAAGGGTCTTTGCTGACAGATGTCTGGGCCTTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR GCA 90 bp TTCTTCAAATACGCCCTCCATTCCACTATACCTCCCATTCACTCCAAGACCTTCATGCCCCACTGCAATTaGTCATGCTGTTCTCTTCCA +
Preference number: 2 (lower is better)
Translates to: FFKYALHSTIPPIHSKTFMPHCN*SCCSLP
Trigger: TGGAAGAGAACAGCATGAGCAATTGCAGTGGGGCAT...GAAGGTCTTGGAGTGAATGGGAGGTATAGTGGAATGGAGGGCGTATTTGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR GCA 90 bp CAGACAATGCATAGTTTTCCACTGAAGTACAATGGGATCTCCCCCTACACTTCCTCAGCTTTAAACACCTaGTGTCAAGAAGGCCCAGAC +
Preference number: 2 (lower is better)
Translates to: QTMHSFPLKYNGISPYTSSALNT*CQEGPD
Trigger: GTCTGGGCCTTCTTGACAGCAGGTGTTTAAAGCTGA...GGAAGTGTAGGGGGAGATCCCATTGTACTTCAGTGGAAAACTATGCATTGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CCA 90 bp AAGCTGTGGGAAATACACAGGAGGGCCAAGGAAGAACATGAACGGAATTTAAAGGGTCACCTAGGATGGTaGTATGTTGGCTTCACCACA +
Preference number: 2 (lower is better)
Translates to: KLWEIHRRAKEEHERNLKGHLGW*YVGFTT
Trigger: TGTGGTGAAGCCAACATACCACCATCCTAGGTGACC...CTTTAAATTCCGTTCATGTTCTTCCTTGGCCCTCCTGTGTATTTCCCACAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CCA 90 bp GTAAATGAGGAAGAAAACATGATAATGGGATGGGTTTACAGTCTTGCAGGCTCACTAATGGCTGGCTTATaGCCAGGAGGGGTGTCATCC +
Preference number: 2 (lower is better)
Translates to: VNEEENMIMGWVYSLAGSLMAGL*PGGVSS
Trigger: GGATGACACCCCTCCTGGCCATAAGCCAGCCATTAG...TGAGCCTGCAAGACTGTAAACCCATCCCATTATCATGTTTTCTTCCTCATTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CCA 90 bp CCAGAAAGATCCAGGTTGGAAAACCAATTCAGCTACTTACTAATGGGGCAATTTGGCCTAGCAAAGCTGTaGGAAATACACAGGAGGGCC +
Preference number: 2 (lower is better)
Translates to: PERSRLENQFSYLLMGQFGLAKL*EIHRRA
Trigger: GGCCCTCCTGTGTATTTCCCACAGCTTTGCTAGGCC...AAATTGCCCCATTAGTAAGTAGCTGAATTGGTTTTCCAACCTGGATCTTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CCA 90 bp GACATACATCTTCCCTCAGCCTCTTGCCAGTTTTACAACCCAGGACTGTCTTTCCTCACAGGATCCACATaGCTTCTTGTTCTCAGTACT +
Preference number: 2 (lower is better)
Translates to: DIHLPSASCQFYNPGLSFLTGST*LLVLST
Trigger: AGTACTGAGAACAAGAAGCCATGTGGATCCTGTGAG...GAAAGACAGTCCTGGGTTGTAAAACTGGCAAGAGGCTGAGGGAAGATGTATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR TCA 90 bp GTCTTCTTGGATCCCAGCTGTGGGGCAGAGAGGAAATTTAACGCTTTAATTATTTCCAGTGAAACACAATaGCCAACCCTGGGTCACCTA +
Preference number: 2 (lower is better)
Translates to: VFLDPSCGAERKFNALIISSETQ*PTLGHL
Trigger: TAGGTGACCCAGGGTTGGTCATTGTGTTTCACTGGA...AATAATTAAAGCGTTAAATTTCCTCTCTGCCCCACAGCTGGGATCCAAGAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR TCA 90 bp CAGCAACCTGGATTAATAACAGGGATCACACTGAACTCTGATACAGCTCTTCTGGGGATAAAAAGATTCTaGTGCAGGCAGAAAGGGCAG +
Preference number: 2 (lower is better)
Translates to: QQPGLITGITLNSDTALLGIKRF*CRQKGQ
Trigger: CTGCCCTTTCTGCCTGCATCAGAATCTTTTTATCCC...CAGAAGAGCTGTATCAGAGTTCAGTGTGATCCCTGTTATTAATCCAGGTTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR TCA 90 bp TTCTTCAAATACGCCCTCCATTCCACTATACCTCCCATTCACTCCAAGACCTTCGATCACACTGAACTCTaGTACAGCTCTTCTGTATGG +
Preference number: 2 (lower is better)
Translates to: FFKYALHSTIPPIHSKTFDHTEL*YSSSVW
Trigger: CCATACAGAAGAGCTGTATCAGAGTTCAGTGTGATC...GAAGGTCTTGGAGTGAATGGGAGGTATAGTGGAATGGAGGGCGTATTTGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR TCA 90 bp GTAAATGAGGAAGAAAACATGATAATGGGATGGGTTTACAGTCTTGCAGGCTCATCCTTCCTGAGACTCTaGTTCAGTAGGTCTGGGGTG +
Preference number: 2 (lower is better)
Translates to: VNEEENMIMGWVYSLAGSSFLRL*FSRSGV
Trigger: CACCCCAGACCTACTGAATCAGAGTCTCAGGAAGGA...TGAGCCTGCAAGACTGTAAACCCATCCCATTATCATGTTTTCTTCCTCATTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR TCA 90 bp GTCTTCTTGGATCCCAGCTGTGGGGCAGAGAGGAAATTTAACGCTTTAATTATTGCCCATGCCTCCTTATaGAGAGAATCACCCTGGATA +
Preference number: 2 (lower is better)
Translates to: VFLDPSCGAERKFNALIIAHASL*RESPWI
Trigger: TATCCAGGGTGATTCTCTTCATAAGGAGGCATGGGC...AATAATTAAAGCGTTAAATTTCCTCTCTGCCCCACAGCTGGGATCCAAGAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR TCA 90 bp AAAAGAGGTTTAATTGGCTCATGGTTCTGCAGGCTGTACAGGAAGCGTCACATACCAATATTAGGCACCTaGCTTCCCTTAGAGCATCAG +
Preference number: 2 (lower is better)
Translates to: KRGLIGSWFCRLYRKRHIPILGT*LPLEHQ
Trigger: CTGATGCTCTAAGGGAAGTCAGGTGCCTAATATTGG...TATGTGACGCTTCCTGTACAGCCTGCAGAACCATGAGCCAATTAAACCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR GCA 90 bp CAGACAATGCATAGTTTTCCACTGAAGTACAATGGGATCTCCCCCTACACTTCCAAGGTCTTGCCATATTaGCTAGGCTGGTCTCAAACT +
Preference number: 2 (lower is better)
Translates to: QTMHSFPLKYNGISPYTSKVLPY*LGWSQT
Trigger: AGTTTGAGACCAGCCTAGGCAATATGGCAAGACCTT...GGAAGTGTAGGGGGAGATCCCATTGTACTTCAGTGGAAAACTATGCATTGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR GCA 90 bp ATCATATACTATTACTTGTCAGCCCACACAATCCCACCTATGCTCTGGATTCTGATCCACCCATCTCTGTaGCTAATGGCTGGCTTATGG +
Preference number: 2 (lower is better)
Translates to: IIYYYLSAHTIPPMLWILIHPSL*LMAGLW
Trigger: CCATAAGCCAGCCATTAGGCACAGAGATGGGTGGAT...CAGAATCCAGAGCATAGGTGGGATTGTGTGGGCTGACAAGTAATAGTATATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR GCA 90 bp GACATACATCTTCCCTCAGCCTCTTGCCAGTTTTACAACCCAGGACTGTCTTTCATGGGTTTACAGTCTTaGAGGCTCAAATCAACTGTG +
Preference number: 2 (lower is better)
Translates to: DIHLPSASCQFYNPGLSFMGLQS*RLKSTV
Trigger: CACAGTTGATTTGAGCCTGCAAGACTGTAAACCCAT...GAAAGACAGTCCTGGGTTGTAAAACTGGCAAGAGGCTGAGGGAAGATGTATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR GCA 90 bp GTCTTCTTGGATCCCAGCTGTGGGGCAGAGAGGAAATTTAACGCTTTAATTATTCTCCTTTCTCCCACTTaGTGTGGGATGTGCCTAACT +
Preference number: 2 (lower is better)
Translates to: VFLDPSCGAERKFNALIILLSPT*CGMCLT
Trigger: AGTTAGGCACATCCCACAGCAAGTGGGAGAAAGGAG...AATAATTAAAGCGTTAAATTTCCTCTCTGCCCCACAGCTGGGATCCAAGAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CCA 90 bp GCTCGCATTAGGGTACTAAAAGATTTCCCCCATCAAGATGGCCTTCATGCTCCCCAGAAAGATCCAGGTTaGAAAACCAATTCAGCTACT +
Preference number: 2 (lower is better)
Translates to: ARIRVLKDFPHQDGLHAPQKDPG*KTNSAT
Trigger: AGTAGCTGAATTGGTTTTCCAACCTGGATCTTTCTG...GGGAGCATGAAGGCCATCTTGATGGGGGAAATCTTTTAGTACCCTAATGCGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR TCA 90 bp CTGGGTCACCTAGGATGGTGGTATGTTGGCTTCACCACAAATTGTGGGAGTTTTTTACTGCAAGGGGTTTaGGAATCTATGGACAATGTT +
Preference number: 2 (lower is better)
Translates to: LGHLGWWYVGFTTNCGSFLLQGV*ESMDNV
Trigger: AACATTGTCCATAGATTCTCAAACCCCTTGCAGTAA...AAAACTCCCACAATTTGTGGTGAAGCCAACATACCACCATCCTAGGTGACCCAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR TCA 90 bp CCAGAAAGATCCAGGTTGGAAAACCAATTCAGCTACTTACTAATGGGGCAATTTGCCTTGGGATGCTGTTaGTCTATGATCTTACCCCCA +
Preference number: 2 (lower is better)
Translates to: PERSRLENQFSYLLMGQFALGCC*SMILPP
Trigger: TGGGGGTAAGATCATAGATCAACAGCATCCCAAGGC...AAATTGCCCCATTAGTAAGTAGCTGAATTGGTTTTCCAACCTGGATCTTTCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR GCA 90 bp GACATACATCTTCCCTCAGCCTCTTGCCAGTTTTACAACCCAGGACTGTCTTTCTGTTTCCTTAGTCAATaGTACGGCTTCAGTGTTTGT +
Preference number: 2 (lower is better)
Translates to: DIHLPSASCQFYNPGLSFCFLSQ*YGFSVC
Trigger: ACAAACACTGAAGCCGTAGCATTGACTAAGGAAACA...GAAAGACAGTCCTGGGTTGTAAAACTGGCAAGAGGCTGAGGGAAGATGTATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CCA 90 bp AAGCTGTGGGAAATACACAGGAGGGCCAAGGAAGAACATGAACGGAATTTAAAGAGGATGGTGGTATGTTaGCTTCACCACAAATTGTGG +
Preference number: 2 (lower is better)
Translates to: KLWEIHRRAKEEHERNLKRMVVC*LHHKLW
Trigger: CCACAATTTGTGGTGAAGCCAACATACCACCATCCT...CTTTAAATTCCGTTCATGTTCTTCCTTGGCCCTCCTGTGTATTTCCCACAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CCA 90 bp CAGACAATGCATAGTTTTCCACTGAAGTACAATGGGATCTCCCCCTACACTTCCAACATGATAATGGGATaGGTTTACAGTCTTGCAGGC +
Preference number: 2 (lower is better)
Translates to: QTMHSFPLKYNGISPYTSNMIMG*VYSLAG
Trigger: GCCTGCAAGACTGTAAACCCATCCCATTATCATGTT...GGAAGTGTAGGGGGAGATCCCATTGTACTTCAGTGGAAAACTATGCATTGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CCA 90 bp ATCATATACTATTACTTGTCAGCCCACACAATCCCACCTATGCTCTGGATTCTGTTCTCCCACTTGCTGTaGGATGTGCCTAACTTTGGT +
Preference number: 2 (lower is better)
Translates to: IIYYYLSAHTIPPMLWILFSHLL*DVPNFG
Trigger: ACCAAAGTTAGGCACATCCCACAGCAAGTGGGAGAA...CAGAATCCAGAGCATAGGTGGGATTGTGTGGGCTGACAAGTAATAGTATATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CCA 90 bp AAAAGAGGTTTAATTGGCTCATGGTTCTGCAGGCTGTACAGGAAGCGTCACATACCCCAACTCCAACACTaGAGATTACATTGCAACATG +
Preference number: 2 (lower is better)
Translates to: KRGLIGSWFCRLYRKRHIPQLQH*RLHCNM
Trigger: CATGTTGCAATGTAATCTCCAGTGTTGGAGTTGGGG...TATGTGACGCTTCCTGTACAGCCTGCAGAACCATGAGCCAATTAAACCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR TCA 90 bp AATGATAATGGCTCACATTTACTTAGTTCTTATTATGTGCAGGGCTCAGCATTTAGCCTCCCGAATAACTaGGACTACAGGTGCGTGCCA +
Preference number: 2 (lower is better)
Translates to: NDNGSHLLSSYYVQGSAFSLPNN*DYRCVP
Trigger: TGGCACGCACCTGTAGTCTCAGTTATTCGGGAGGCT...AAATGCTGAGCCCTGCACATAATAAGAACTAAGTAAATGTGAGCCATTATCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR TCA 90 bp CAGACAATGCATAGTTTTCCACTGAAGTACAATGGGATCTCCCCCTACACTTCCTACAGCATCCTGAGATaGTACAAGTTAGAGATGAGA +
Preference number: 2 (lower is better)
Translates to: QTMHSFPLKYNGISPYTSYSILR*YKLEMR
Trigger: TCTCATCTCTAACTTGTATCATCTCAGGATGCTGTA...GGAAGTGTAGGGGGAGATCCCATTGTACTTCAGTGGAAAACTATGCATTGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR TCA 90 bp AAGCTGTGGGAAATACACAGGAGGGCCAAGGAAGAACATGAACGGAATTTAAAGGGCTCAAATCAACTGTaGGAATCAGGTAATGTGCAA +
Preference number: 2 (lower is better)
Translates to: KLWEIHRRAKEEHERNLKGSNQL*ESGNVQ
Trigger: TTGCACATTACCTGATTCTCACAGTTGATTTGAGCC...CTTTAAATTCCGTTCATGTTCTTCCTTGGCCCTCCTGTGTATTTCCCACAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR TCA 90 bp TCTGCTATCAGTTACCTACAGCTTACAGAGTTGCAAGATAGCTCCCATAGAATCCAAAGAGAGGTCAAGTaGCTTGTCCAATCTCACAAC +
Preference number: 2 (lower is better)
Translates to: SAISYLQLTELQDSSHRIQREVK*LVQSHN
Trigger: GTTGTGAGATTGGACAAGTCACTTGACCTCTCTTTG...GATTCTATGGGAGCTATCTTGCAACTCTGTAAGCTGTAGGTAACTGATAGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR GCA 90 bp GTAAATGAGGAAGAAAACATGATAATGGGATGGGTTTACAGTCTTGCAGGCTCACAGTCCAAGCTGAAGTaGAGTGGCACTATCATAGCT +
Preference number: 2 (lower is better)
Translates to: VNEEENMIMGWVYSLAGSQSKLK*SGTIIA
Trigger: AGCTATGATAGTGCCACTGCACTTCAGCTTGGACTG...TGAGCCTGCAAGACTGTAAACCCATCCCATTATCATGTTTTCTTCCTCATTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CCA 90 bp TCTGCTATCAGTTACCTACAGCTTACAGAGTTGCAAGATAGCTCCCATAGAATCAACATGAGATTTGGGTaGGGACATCCAAACCACATC +
Preference number: 2 (lower is better)
Translates to: SAISYLQLTELQDSSHRINMRFG*GHPNHI
Trigger: GATGTGGTTTGGATGTCCCCACCCAAATCTCATGTT...GATTCTATGGGAGCTATCTTGCAACTCTGTAAGCTGTAGGTAACTGATAGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CCA 90 bp GACATACATCTTCCCTCAGCCTCTTGCCAGTTTTACAACCCAGGACTGTCTTTCTGTTTACTCTTCCTTTaGATAAAGCCAATCAGCAAA +
Preference number: 2 (lower is better)
Translates to: DIHLPSASCQFYNPGLSFCLLFL*IKPISK
Trigger: TTTGCTGATTGGCTTTATCCAAAGGAAGAGTAAACA...GAAAGACAGTCCTGGGTTGTAAAACTGGCAAGAGGCTGAGGGAAGATGTATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR TCA 90 bp TCTGCTATCAGTTACCTACAGCTTACAGAGTTGCAAGATAGCTCCCATAGAATCAAACAGCGTTTTTACTaGCATCCCTGTCCCAAATAT +
Preference number: 2 (lower is better)
Translates to: SAISYLQLTELQDSSHRIKQRFY*HPCPKY
Trigger: ATATTTGGGACAGGGATGTCAGTAAAAACGCTGTTT...GATTCTATGGGAGCTATCTTGCAACTCTGTAAGCTGTAGGTAACTGATAGCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR CAA 90 bp CAAGAATTATTTTGCTCTGCTATCAGTTACCTACAGCTTACAGAGTaGCAAGATAGCTCCCATAGAATCAAAATCAAACAGCCAGGAAGG +
Preference number: 2 (lower is better)
Translates to: QELFCSAISYLQLTE*QDSSHRIKIKQPGR
Trigger: CCTTCCTGGCTGTTTGATTTTGATTCTATGGGAGCTATCTTGCAACTCTGTAAGCTGTAGGTAACTGATAGCAGAGCAAAATAATTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR TCA 90 bp AATGATAATGGCTCACATTTACTTAGTTCTTATTATGTGCAGGGCTCAGCATTTTTCTCTTCCACAGCATaGATGACTGCTTCCTCCTCA +
Preference number: 2 (lower is better)
Translates to: NDNGSHLLSSYYVQGSAFFSSTA*MTASSS
Trigger: TGAGGAGGAAGCAGTCATTCATGCTGTGGAAGAGAA...AAATGCTGAGCCCTGCACATAATAAGAACTAAGTAAATGTGAGCCATTATCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR GCA 90 bp TCTGCTATCAGTTACCTACAGCTTACAGAGTTGCAAGATAGCTCCCATAGAATCGAGAAATCACATTGTTaGTGTGTCTGTGTAGAAAGA +
Preference number: 2 (lower is better)
Translates to: SAISYLQLTELQDSSHRIEKSHC*CVCVER
Trigger: TCTTTCTACACAGACACAGCAACAATGTGATTTCTC...GATTCTATGGGAGCTATCTTGCAACTCTGTAAGCTGTAGGTAACTGATAGCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR GCA 90 bp AATGATAATGGCTCACATTTACTTAGTTCTTATTATGTGCAGGGCTCAGCATTTTGGAGACTCAGCCCATaGCTCCTTATGAAGAGAATC +
Preference number: 2 (lower is better)
Translates to: NDNGSHLLSSYYVQGSAFWRLSP*LLMKRI
Trigger: GATTCTCTTCATAAGGAGGCATGGGCTGAGTCTCCA...AAATGCTGAGCCCTGCACATAATAAGAACTAAGTAAATGTGAGCCATTATCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CCA 90 bp AATGATAATGGCTCACATTTACTTAGTTCTTATTATGTGCAGGGCTCAGCATTTATCCCTAGAAAGGTGTaGCTTGAAGTCTCTATGGGG +
Preference number: 2 (lower is better)
Translates to: NDNGSHLLSSYYVQGSAFIPRKV*LEVSMG
Trigger: CCCCATAGAGACTTCAAGCCACACCTTTCTAGGGAT...AAATGCTGAGCCCTGCACATAATAAGAACTAAGTAAATGTGAGCCATTATCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR GCA 90 bp AATGATAATGGCTCACATTTACTTAGTTCTTATTATGTGCAGGGCTCAGCATTTCAGTTACTTGTCATATaGAACCTCCATACACTGAGA +
Preference number: 2 (lower is better)
Translates to: NDNGSHLLSSYYVQGSAFQLLVI*NLHTLR
Trigger: TCTCAGTGTATGGAGGTTGCATATGACAAGTAACTG...AAATGCTGAGCCCTGCACATAATAAGAACTAAGTAAATGTGAGCCATTATCATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR CAA 90 bp CAGATAGCTCAGATCCAAGAAGACTGTGGAATTACTGCAAGGGGTTaGAGAATCTATGGACAATGTTTTTCTATATATGTACTACTATTT +
Preference number: 2 (lower is better)
Translates to: QIAQIQEDCGITARG*RIYGQCFSIYVLLF
Trigger: AAATAGTAGTACATATATAGAAAAACATTGTCCATAGATTCTCAAACCCCTTGCAGTAATTCCACAGTCTTCTTGGATCTGAGCTATCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR GCA 90 bp AATGATAATGGCTCACATTTACTTAGTTCTTATTATGTGCAGGGCTCAGCATTTCTTCTCAGAGATCTTTaGATATATTCCCATATATGC +
Preference number: 2 (lower is better)
Translates to: NDNGSHLLSSYYVQGSAFLLRDL*IYSHIC
Trigger: GCATATATGGGAATATATGCAAAGATCTCTGAGAAG...AAATGCTGAGCCCTGCACATAATAAGAACTAAGTAAATGTGAGCCATTATCATT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR CCA 72 bp GGCGCCTCCGCCCAGCCAGCCGACCAGTCCGGGAGGTaGGGGGCGCTTCTGCCCGGCCGCCCCTACTGGGAA +
Preference number: 3 (lower is better)
Translates to: GASAQPADQSGR*GALLPGRPYWE
Trigger: TTCCCAGTAGGGGCGGCCGGGCAGAAGCGCCCCCCACCTCCCGGACTGGTCGGCTGGCTGGGCGGAGGCGCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR GCA 72 bp GCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTaGCCGGCCACCACCACGTCTGGGAGGTGTACCCAA +
Preference number: 3 (lower is better)
Translates to: ARPPLLGSEEPL*PATTTSGRCTQ
Trigger: TTGGGTACACCTCCCAGACGTGGTGGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR CCA 72 bp GTTTCCTTAGTCAATGCTACGGCTTCAGTGTTTGTGTaGGGGGCGCCTCCGCCCAGCCAGCCGACCAGTCCG +
Preference number: 3 (lower is better)
Translates to: VSLVNATASVFV*GAPPPSQPTSP
Trigger: CGGACTGGTCGGCTGGCTGGGCGGAGGCGCCCCCCACACAAACACTGAAGCCGTAGCATTGACTAAGGAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR CCA 72 bp TTCAGTGATTCTCCTGCCTCAGTCTCCCTCCTGGGCTaGGACTATATACAGGTGGGCCCCACCATGCCTGGC +
Preference number: 3 (lower is better)
Translates to: FSDSPASVSLLG*DYIQVGPTMPG
Trigger: GCCAGGCATGGTGGGGCCCACCTGTATATAGTCCCAGCCCAGGAGGGAGACTGAGGCAGGAGAATCACTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR GCA 72 bp GTCAAGAAGGCCCAGACATCTGTCAGCAAAGACCCTTaGCTGGTAAGACTGCCCTTCTCACCCCTGGCCCAG +
Preference number: 3 (lower is better)
Translates to: VKKAQTSVSKDP*LVRLPFSPLAQ
Trigger: CTGGGCCAGGGGTGAGAAGGGCAGTCTTACCAGGCAAGGGTCTTTGCTGACAGATGTCTGGGCCTTCTTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CAA 90 bp GTTCTGCAGGCTGTACAGGAAGCGTCACATAGGCATCTGCTTCTGGGGAGGCTTACTTTGGTGGGCACCTaGCTCCAAGCTGCAGGACTA +
Preference number: 3 (lower is better)
Translates to: VLQAVQEASHRHLLLGRLTLVGT*LQAAGL
Trigger: TAGTCCTGCAGCTTGGAGCAAGGTGCCCACCAAAGT...AAGCCTCCCCAGAAGCAGATGCCTATGTGACGCTTCCTGTACAGCCTGCAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR GCA 72 bp TTAAACTCGCTTGTGCCCCTCCCAACTCACGGACTCTaGCTCCCACTCATAACCACCCACTCATTCATGCCC +
Preference number: 3 (lower is better)
Translates to: LNSLVPLPTHGL*LPLITTHSFMP
Trigger: GGGCATGAATGAGTGGGTGGTTATGAGTGGGAGGCAGAGTCCGTGAGTTGGGAGGGGCACAAGCGAGTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR GCA 72 bp GAGATAGCACTCCTTTCTCCCACTTGCTGTGGGATGTaGCTAACTTTGGTGGGCACCTTGCTCCAAGCTGCA +
Preference number: 3 (lower is better)
Translates to: EIALLSPTCCGM*LTLVGTLLQAA
Trigger: TGCAGCTTGGAGCAAGGTGCCCACCAAAGTTAGGCACATCCCACAGCAAGTGGGAGAAAGGAGTGCTATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR GCA 72 bp TTCTGCAGGCTGTACAGGAAGCGTCACATAGGCATCTaGTTCTGGGGAGGCTTCAGGAAGCTTCCAGTCATG +
Preference number: 3 (lower is better)
Translates to: FCRLYRKRHIGI*FWGGFRKLPVM
Trigger: CATGACTGGAAGCTTCCTGAAGCCTCCCCAGAAGCAGATGCCTATGTGACGCTTCCTGTACAGCCTGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR CCA 72 bp AGGCTGTACAGGAAGCGTCACATAGGCATCTGCTTCTaGGGAGGCTTCAGGAAGCTTCCAGTCATGGCAGTA +
Preference number: 3 (lower is better)
Translates to: RLYRKRHIGICF*GGFRKLPVMAV
Trigger: TACTGCCATGACTGGAAGCTTCCTGAAGCCTCCCCAGAAGCAGATGCCTATGTGACGCTTCCTGTACAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR GCA 72 bp CCATCAAGATGGCCTTCATGCTCCCCTCAGCCTGACTaGACTTCAGACAGGCTTCTTCCTAACACGATTAGG +
Preference number: 3 (lower is better)
Translates to: PSRWPSCSPQPD*TSDRLLPNTIR
Trigger: CCTAATCGTGTTAGGAAGAAGCCTGTCTGAAGTGCAGTCAGGCTGAGGGGAGCATGAAGGCCATCTTGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR CCA 72 bp TATTACTTGTCAGCCCACACAATCCCACCTATGCTCTaGATTCTGGCCCTTCCATTCCCTCTAGGGCTAGGC +
Preference number: 3 (lower is better)
Translates to: YYLSAHTIPPML*ILALPFPLGLG
Trigger: GCCTAGCCCTAGAGGGAATGGAAGGGCCAGAATCCAGAGCATAGGTGGGATTGTGTGGGCTGACAAGTAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CAA 90 bp CAAGAAGGCCCAGACATCTGTCAGCAAAGACCCTTGCCTGGTAAGACTGCCCTTTGCCTTGGGATGCTGTaGATCTATGATCTTACCCCC +
Preference number: 3 (lower is better)
Translates to: QEGPDICQQRPLPGKTALCLGML*IYDLTP
Trigger: GGGGGTAAGATCATAGATCAACAGCATCCCAAGGCA...AAGGGCAGTCTTACCAGGCAAGGGTCTTTGCTGACAGATGTCTGGGCCTTCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR GCA 72 bp CCCACTAGGCCCCAACTCCAACACTGGAGATTACATTaGAACATGAGATTTGGGTGGGGACATCCAAACCAC +
Preference number: 3 (lower is better)
Translates to: PTRPQLQHWRLH*NMRFGWGHPNH
Trigger: GTGGTTTGGATGTCCCCACCCAAATCTCATGTTGCAATGTAATCTCCAGTGTTGGAGTTGGGGCCTAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR GCA 72 bp CTAGGGCTAGGCACCACAAGTTATACCCTCCCTCTCTaGCAACAACATCATCATCTGCTCGCATTAGGGTAC +
Preference number: 3 (lower is better)
Translates to: LGLGTTSYTLPL*QQHHHLLALGY
Trigger: GTACCCTAATGCGAGCAGATGATGATGTTGTTGGCAGAGAGGGAGGGTATAACTTGTGGTGCCTAGCCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR CCA 72 bp TCAAAAGGAGATAGCACTCCTTTCTCCCACTTGCTGTaGGATGTGCCTAACTTTGGTGGGCACCTTGCTCCA +
Preference number: 3 (lower is better)
Translates to: SKGDSTPFSHLL*DVPNFGGHLAP
Trigger: TGGAGCAAGGTGCCCACCAAAGTTAGGCACATCCCACAGCAAGTGGGAGAAAGGAGTGCTATCTCCTTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR TCA 72 bp CCTGTCCCAAATATAGATCAGGAGGCTGAAGTCCAGTaGAACACAATGACCAACCCTGGGTCACCTAGGATG +
Preference number: 3 (lower is better)
Translates to: PVPNIDQEAEVQ*NTMTNPGSPRM
Trigger: CATCCTAGGTGACCCAGGGTTGGTCATTGTGTTTCACTGGACTTCAGCCTCCTGATCTATATTTGGGACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR GCA 72 bp CTCCCACTCATAACCACCCACTCATTCATGCCCCACTaGAATTGCTCATGCTGTTCTCTTCCACAGCATGAA +
Preference number: 3 (lower is better)
Translates to: LPLITTHSFMPH*NCSCCSLPQHE
Trigger: TTCATGCTGTGGAAGAGAACAGCATGAGCAATTGCAGTGGGGCATGAATGAGTGGGTGGTTATGAGTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CAA 90 bp CAAGAAGGCCCAGACATCTGTCAGCAAAGACCCTTGCCTGGTAAGACTGCCCTTTATTTGAGTTCCCCTTaGAGACATACATCTTCCCTC +
Preference number: 3 (lower is better)
Translates to: QEGPDICQQRPLPGKTALYLSSP*RHTSSL
Trigger: GAGGGAAGATGTATGTCTCAAAGGGGAACTCAAATA...AAGGGCAGTCTTACCAGGCAAGGGTCTTTGCTGACAGATGTCTGGGCCTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR GCA 72 bp TATGGGGACAGCCCCTATAAATGGAGACTCAGCCCATaGCTCCTTATGAAGAGAATCACCCTGGATATGAGT +
Preference number: 3 (lower is better)
Translates to: YGDSPYKWRLSP*LLMKRITLDMS
Trigger: ACTCATATCCAGGGTGATTCTCTTCATAAGGAGGCATGGGCTGAGTCTCCATTTATAGGGGCTGTCCCCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR GCA 72 bp GGTGTGGTGGCTCATGCCAAGCAGATGTTAGTGCCATaGTTGTACAGCCTACAGAACAGTGAGCCAAATAAA +
Preference number: 3 (lower is better)
Translates to: GVVAHAKQMLVP*LYSLQNSEPNK
Trigger: TTTATTTGGCTCACTGTTCTGTAGGCTGTACAAGCATGGCACTAACATCTGCTTGGCATGAGCCACCACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CAA 90 bp AAGCTGTGGGAAATACACAGGAGGGCCAAGGAAGAACATGAACGGAATTTAAAGGTACCCAACAGCTCATaGAGAACGGGCCATGATGAC +
Preference number: 3 (lower is better)
Translates to: KLWEIHRRAKEEHERNLKVPNSS*RTGHDD
Trigger: GTCATCATGGCCCGTTCTCAATGAGCTGTTGGGTAC...CTTTAAATTCCGTTCATGTTCTTCCTTGGCCCTCCTGTGTATTTCCCACAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CAA 90 bp CAAGAAGGCCCAGACATCTGTCAGCAAAGACCCTTGCCTGGTAAGACTGCCCTTCCTTACTTCATTCTCTaGGATTTTCCTTCACAGGAA +
Preference number: 3 (lower is better)
Translates to: QEGPDICQQRPLPGKTALPYFIL*DFPSQE
Trigger: TTCCTGTGAAGGAAAATCCAAGAGAATGAAGTAAGG...AAGGGCAGTCTTACCAGGCAAGGGTCTTTGCTGACAGATGTCTGGGCCTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CAA 90 bp AAAAGAGGTTTAATTGGCTCATGGTTCTGCAGGCTGTACAGGAAGCGTCACATAACTCCTTTCTCCCACTaGCTGTGGGATGTGCCTAAC +
Preference number: 3 (lower is better)
Translates to: KRGLIGSWFCRLYRKRHITPFSH*LWDVPN
Trigger: GTTAGGCACATCCCACAGCAAGTGGGAGAAAGGAGT...TATGTGACGCTTCCTGTACAGCCTGCAGAACCATGAGCCAATTAAACCTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CAA 90 bp AAAAGAGGTTTAATTGGCTCATGGTTCTGCAGGCTGTACAGGAAGCGTCACATATCTTCCCTCAGCCTCTaGCCAGTTTTACAACCCAGG +
Preference number: 3 (lower is better)
Translates to: KRGLIGSWFCRLYRKRHISSLSL*PVLQPR
Trigger: CCTGGGTTGTAAAACTGGCAAGAGGCTGAGGGAAGA...TATGTGACGCTTCCTGTACAGCCTGCAGAACCATGAGCCAATTAAACCTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CAA 90 bp CTGGGTCACCTAGGATGGTGGTATGTTGGCTTCACCACAAATTGTGGGAGTTTTCTGTACTGGTGGGATTaGCCAACACTAAACCAAATG +
Preference number: 3 (lower is better)
Translates to: LGHLGWWYVGFTTNCGSFLYWWD*PTLNQM
Trigger: CATTTGGTTTAGTGTTGGCAAATCCCACCAGTACAG...AAAACTCCCACAATTTGTGGTGAAGCCAACATACCACCATCCTAGGTGACCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR TCA 72 bp GGTGATCTATGGACCACACTTGGAGTAGCTCACTGTTaGCCGTTTTGGGATAAAAAGATTCTGATGCAGGCA +
Preference number: 3 (lower is better)
Translates to: GDLWTTLGVAHC*PFWDKKILMQA
Trigger: TGCCTGCATCAGAATCTTTTTATCCCAAAACGGTCAACAGTGAGCTACTCCAAGTGTGGTCCATAGATCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR CCA 72 bp TTCAAATTAAATCCACCCATCTCTGTGCCTAATGGCTaGCTTATGGCCAGGAGGGGTGTCATCCAAAATAAC +
Preference number: 3 (lower is better)
Translates to: FKLNPPISVPNG*LMARRGVIQNN
Trigger: GTTATTTTGGATGACACCCCTCCTGGCCATAAGCCAGCCATTAGGCACAGAGATGGGTGGATTTAATTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR TCA 72 bp TGTACTAAGAAAAATTCTTCTGCCTTGGGATGCTGTTaGTCTATGATCTTACCCCCAACCCTGTGCTCTCTG +
Preference number: 3 (lower is better)
Translates to: CTKKNSSALGCC*SMILPPTLCSL
Trigger: CAGAGAGCACAGGGTTGGGGGTAAGATCATAGATCAACAGCATCCCAAGGCAGAAGAATTTTTCTTAGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR TCA 72 bp GGATGGGTTTACAGTCTTGCAGGCTCAAATCAACTGTaGGAATCAGGTAATGTGCAACCTGAATCCCTAGAA +
Preference number: 3 (lower is better)
Translates to: GWVYSLAGSNQL*ESGNVQPESLE
Trigger: TTCTAGGGATTCAGGTTGCACATTACCTGATTCTCACAGTTGATTTGAGCCTGCAAGACTGTAAACCCATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR GCA 72 bp ATTAAGGGCGGTGCAAGATGTACTTTGTTAAACAGATaGTTGAAGGCAGCATGCTCGTTAAGAGTCATCACC +
Preference number: 3 (lower is better)
Translates to: IKGGARCTLLNR*LKAACSLRVIT
Trigger: GGTGATGACTCTTAACGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGTACATCTTGCACCGCCCTTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CAA 90 bp AAGCTGTGGGAAATACACAGGAGGGCCAAGGAAGAACATGAACGGAATTTAAAGGCTGAAGCATCTCCTTaGCATGTGAAGAGAATCTAT +
Preference number: 3 (lower is better)
Translates to: KLWEIHRRAKEEHERNLKAEASP*HVKRIY
Trigger: ATAGATTCTCTTCACATGCAAAGGAGATGCTTCAGC...CTTTAAATTCCGTTCATGTTCTTCCTTGGCCCTCCTGTGTATTTCCCACAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CAA 90 bp CAGACAATGCATAGTTTTCCACTGAAGTACAATGGGATCTCCCCCTACACTTCCGGTGCAAGATGTACTTaGTTAAACAGATGCTTGAAG +
Preference number: 3 (lower is better)
Translates to: QTMHSFPLKYNGISPYTSGARCT*LNRCLK
Trigger: CTTCAAGCATCTGTTTAACAAAGTACATCTTGCACC...GGAAGTGTAGGGGGAGATCCCATTGTACTTCAGTGGAAAACTATGCATTGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CAA 90 bp CCAGAAAGATCCAGGTTGGAAAACCAATTCAGCTACTTACTAATGGGGCAATTTCCAGCTCCCAGTTACTaGTCATATGCAACCTCCATA +
Preference number: 3 (lower is better)
Translates to: PERSRLENQFSYLLMGQFPAPSY*SYATSI
Trigger: TATGGAGGTTGCATATGACAAGTAACTGGGAGCTGG...AAATTGCCCCATTAGTAAGTAGCTGAATTGGTTTTCCAACCTGGATCTTTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CAA 90 bp GTCTTCTTGGATCCCAGCTGTGGGGCAGAGAGGAAATTTAACGCTTTAATTATTGATGGGTTTACAGTCTaGCAGGCTCAAATCAACTGT +
Preference number: 3 (lower is better)
Translates to: VFLDPSCGAERKFNALIIDGFTV*QAQINC
Trigger: ACAGTTGATTTGAGCCTGCAAGACTGTAAACCCATC...AATAATTAAAGCGTTAAATTTCCTCTCTGCCCCACAGCTGGGATCCAAGAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR TCA 72 bp CAGAGTCTAGATTCCAGACAATGCATAGTTTTCCACTaGAGTACAATGGGATCTCCCCCTACACTTCCATTT +
Preference number: 3 (lower is better)
Translates to: QSLDSRQCIVFH*STMGSPPTLPF
Trigger: AAATGGAAGTGTAGGGGGAGATCCCATTGTACTTCAGTGGAAAACTATGCATTGTCTGGAATCTAGACTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR GCA 72 bp TATTCGAAGCCAAATCTGTATGGAACTCAACTGCTCTaGATCACCTCCAAGGTAAAGGTTAAACTCGCTTGT +
Preference number: 3 (lower is better)
Translates to: YSKPNLYGTQLL*ITSKVKVKLAC
Trigger: ACAAGCGAGTTTAACCTTTACCTTGGAGGTGATGCAGAGCAGTTGAGTTCCATACAGATTTGGCTTCGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR CCA 72 bp TCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATaGATTAAGGGCGGTGCAAGATGTACTTTGTTAAAC +
Preference number: 3 (lower is better)
Translates to: SLKHVLCPLRVK*IKGGARCTLLN
Trigger: GTTTAACAAAGTACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR CCA 72 bp GAAGTAGTGGAACTCATATTCGAAGCCAAATCTGTATaGAACTCAACTGCTCTGCATCACCTCCAAGGTAAA +
Preference number: 3 (lower is better)
Translates to: EVVELIFEAKSV*NSTALHHLQGK
Trigger: TTTACCTTGGAGGTGATGCAGAGCAGTTGAGTTCCATACAGATTTGGCTTCGAATATGAGTTCCACTACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CAA 90 bp AAGCTGTGGGAAATACACAGGAGGGCCAAGGAAGAACATGAACGGAATTTAAAGATTACTGCAAGGGGTTaGAGAATCTATGGACAATGT +
Preference number: 3 (lower is better)
Translates to: KLWEIHRRAKEEHERNLKITARG*RIYGQC
Trigger: ACATTGTCCATAGATTCTCAAACCCCTTGCAGTAAT...CTTTAAATTCCGTTCATGTTCTTCCTTGGCCCTCCTGTGTATTTCCCACAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CAA 90 bp AAGCTGTGGGAAATACACAGGAGGGCCAAGGAAGAACATGAACGGAATTTAAAGGAAAACCAGAGACCTTaGTTCACTTGTTTATCTGCT +
Preference number: 3 (lower is better)
Translates to: KLWEIHRRAKEEHERNLKENQRP*FTCLSA
Trigger: AGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTC...CTTTAAATTCCGTTCATGTTCTTCCTTGGCCCTCCTGTGTATTTCCCACAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CAA 90 bp AAAAGAGGTTTAATTGGCTCATGGTTCTGCAGGCTGTACAGGAAGCGTCACATAGATAGAGAAATCACATaGTTGCTGTGTCTGTGTAGA +
Preference number: 3 (lower is better)
Translates to: KRGLIGSWFCRLYRKRHIDREIT*LLCLCR
Trigger: TCTACACAGACACAGCAACAATGTGATTTCTCTATC...TATGTGACGCTTCCTGTACAGCCTGCAGAACCATGAGCCAATTAAACCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CAA 90 bp AATGATAATGGCTCACATTTACTTAGTTCTTATTATGTGCAGGGCTCAGCATTTCAAGGTCTTGCCATATaGCCTAGGCTGGTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: NDNGSHLLSSYYVQGSAFQGLAI*PRLVSN
Trigger: GTTTGAGACCAGCCTAGGCAATATGGCAAGACCTTG...AAATGCTGAGCCCTGCACATAATAAGAACTAAGTAAATGTGAGCCATTATCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CAA 90 bp AATGATAATGGCTCACATTTACTTAGTTCTTATTATGTGCAGGGCTCAGCATTTCTAGAAAGGTGTGGCTaGAAGTCTCTATGGGGACAG +
Preference number: 3 (lower is better)
Translates to: NDNGSHLLSSYYVQGSAFLERCG*KSLWGQ
Trigger: CTGTCCCCATAGAGACTTCAAGCCACACCTTTCTAG...AAATGCTGAGCCCTGCACATAATAAGAACTAAGTAAATGTGAGCCATTATCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CAA 90 bp AAAAGAGGTTTAATTGGCTCATGGTTCTGCAGGCTGTACAGGAAGCGTCACATAATGTTTACTCTTCCTTaGGATAAAGCCAATCAGCAA +
Preference number: 3 (lower is better)
Translates to: KRGLIGSWFCRLYRKRHIMFTLP*DKANQQ
Trigger: TTGCTGATTGGCTTTATCCAAAGGAAGAGTAAACAT...TATGTGACGCTTCCTGTACAGCCTGCAGAACCATGAGCCAATTAAACCTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR-3UTR CAA 90 bp TCTGCTATCAGTTACCTACAGCTTACAGAGTTGCAAGATAGCTCCCATAGAATCATCATATACTATTACTaGTCAGCCCACACAATCCCA +
Preference number: 3 (lower is better)
Translates to: SAISYLQLTELQDSSHRIIIYYY*SAHTIP
Trigger: TGGGATTGTGTGGGCTGACAAGTAATAGTATATGAT...GATTCTATGGGAGCTATCTTGCAACTCTGTAAGCTGTAGGTAACTGATAGCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR GCA 72 bp TTTGCTCTGCTATCAGTTACCTACAGCTTACAGAGTTaGAAGATAGCTCCCATAGAATCAAAATCAAACAGC +
Preference number: 3 (lower is better)
Translates to: FALLSVTYSLQS*KIAPIESKSNS
Trigger: GCTGTTTGATTTTGATTCTATGGGAGCTATCTTGCAACTCTGTAAGCTGTAGGTAACTGATAGCAGAGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR CCA 72 bp TGGTGGGATTTGCCAACACTAAACCAAATGTTCATCTaGGTCTTGGCTGCAATTTTAAGAACTTCATTAGAA +
Preference number: 3 (lower is better)
Translates to: WWDLPTLNQMFI*VLAAILRTSLE
Trigger: TTCTAATGAAGTTCTTAAAATTGCAGCCAAGACCCAGATGAACATTTGGTTTAGTGTTGGCAAATCCCACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR GCA 72 bp AGACACAATGTACACGTCTATAGACAAGAATTATTTTaGTCTGCTATCAGTTACCTACAGCTTACAGAGTTG +
Preference number: 3 (lower is better)
Translates to: RHNVHVYRQELF*SAISYLQLTEL
Trigger: CAACTCTGTAAGCTGTAGGTAACTGATAGCAGAGCAAAATAATTCTTGTCTATAGACGTGTACATTGTGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR TCA 72 bp AGATCCAAGAAGACTGTGGAATTACTGCAAGGGGTTTaGGAATCTATGGACAATGTTTTTCTATATATGTAC +
Preference number: 3 (lower is better)
Translates to: RSKKTVELLQGV*ESMDNVFLYMY
Trigger: GTACATATATAGAAAAACATTGTCCATAGATTCTCAAACCCCTTGCAGTAATTCCACAGTCTTCTTGGATCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR GCA 72 bp ACTCCTTTATGGCAATACAAAATGGACTCACACACATaGTATCGTATACTACTGCTATCATATACTATGCTA +
Preference number: 3 (lower is better)
Translates to: TPLWQYKMDSHT*YRILLLSYTML
Trigger: TAGCATAGTATATGATAGCAGTAGTATACGATAGCATGTGTGTGAGTCCATTTTGTATTGCCATAAAGGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CCA 90 bp GCCCAGCTCCCAGTTACTTGTCATATGCAACCTCCATACACTGAGAGGGTGACAGACCAGTCCGGGAGGTaGGGGGCGCTTCTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: AQLPVTCHMQPPYTERVTDQSGR*GALLPG
Trigger: GCCGGGCAGAAGCGCCCCCCACCTCCCGGACTGGTC...TGTCACCCTCTCAGTGTATGGAGGTTGCATATGACAAGTAACTGGGAGCTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR CAA 72 bp CCACCACCACGTCTGGGAGGTGTACCCAACAGCTCATaGAGAACGGGCCATGATGACGATGGTGGTTTTGCG +
Preference number: 4 (lower is better)
Translates to: PPPRLGGVPNSS*RTGHDDDGGFA
Trigger: CGCAAAACCACCATCGTCATCATGGCCCGTTCTCAATGAGCTGTTGGGTACACCTCCCAGACGTGGTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CCA 90 bp CCAACCCTGGGTCACCTAGGATGGTGGTATGTTGGCTTCACCACAAATTGTGGGCTGGTCTCAAACTCCTaGCCTCAAGCGACCGTCCCA +
Preference number: 4 (lower is better)
Translates to: PTLGHLGWWYVGFTTNCGLVSNS*PQATVP
Trigger: TGGGACGGTCGCTTGAGGCCAGGAGTTTGAGACCAG...CCCACAATTTGTGGTGAAGCCAACATACCACCATCCTAGGTGACCCAGGGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp GTTCTGCAGGCTGTACAGGAAGCGTCACATAGGCATCTGCTTCTGGGGAGGCTTTCCCCTCAGCCTGACTaGACTTCAGACAGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: VLQAVQEASHRHLLLGRLSPQPD*TSDRLL
Trigger: AAGAAGCCTGTCTGAAGTGCAGTCAGGCTGAGGGGA...AAGCCTCCCCAGAAGCAGATGCCTATGTGACGCTTCCTGTACAGCCTGCAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CCA 90 bp GCCCAGCTCCCAGTTACTTGTCATATGCAACCTCCATACACTGAGAGGGTGACACCCCTGGCCCAGTCTTaGAGAGAGGATAACCACTGC +
Preference number: 4 (lower is better)
Translates to: AQLPVTCHMQPPYTERVTPLAQS*REDNHC
Trigger: GCAGTGGTTATCCTCTCTCCAAGACTGGGCCAGGGG...TGTCACCCTCTCAGTGTATGGAGGTTGCATATGACAAGTAACTGGGAGCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR TCA 90 bp CCAACCCTGGGTCACCTAGGATGGTGGTATGTTGGCTTCACCACAAATTGTGGGTACCCAACAGCTCATTaGGAACGGGCCATGATGACG +
Preference number: 4 (lower is better)
Translates to: PTLGHLGWWYVGFTTNCGYPTAH*ERAMMT
Trigger: CGTCATCATGGCCCGTTCTCAATGAGCTGTTGGGTA...CCCACAATTTGTGGTGAAGCCAACATACCACCATCCTAGGTGACCCAGGGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CCA 90 bp CCAACCCTGGGTCACCTAGGATGGTGGTATGTTGGCTTCACCACAAATTGTGGGAAGCGGCAAGGGGAATaGGAGGAACAATCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: PTLGHLGWWYVGFTTNCGKRQGE*EEQSVS
Trigger: GCTCACAGATTGTTCCTCCCATTCCCCTTGCCGCTT...CCCACAATTTGTGGTGAAGCCAACATACCACCATCCTAGGTGACCCAGGGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CCA 90 bp GCCCAGCTCCCAGTTACTTGTCATATGCAACCTCCATACACTGAGAGGGTGACAGGCCTAGCAAAGCTGTaGGAAATACACAGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: AQLPVTCHMQPPYTERVTGLAKL*EIHRRA
Trigger: GGCCCTCCTGTGTATTTCCCACAGCTTTGCTAGGCC...TGTCACCCTCTCAGTGTATGGAGGTTGCATATGACAAGTAACTGGGAGCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR CAA 72 bp ACTTGCTGTGGGATGTGCCTAACTTTGGTGGGCACCTaGCTCCAAGCTGCAGGACTACTTCCTGTCATAAGG +
Preference number: 4 (lower is better)
Translates to: TCCGMCLTLVGT*LQAAGLLPVIR
Trigger: CCTTATGACAGGAAGTAGTCCTGCAGCTTGGAGCAAGGTGCCCACCAAAGTTAGGCACATCCCACAGCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR TCA 90 bp CTGGGTCACCTAGGATGGTGGTATGTTGGCTTCACCACAAATTGTGGGAGTTTTATGCTCCCCTCAGCCTaGCTGCACTTCAGACAGGCT +
Preference number: 4 (lower is better)
Translates to: LGHLGWWYVGFTTNCGSFMLPSA*LHFRQA
Trigger: AGCCTGTCTGAAGTGCAGTCAGGCTGAGGGGAGCAT...AAAACTCCCACAATTTGTGGTGAAGCCAACATACCACCATCCTAGGTGACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp GCCCAGCTCCCAGTTACTTGTCATATGCAACCTCCATACACTGAGAGGGTGACAGCTCACTGCAACCTCTaGCTCCCAGGTTTCAGTGAT +
Preference number: 4 (lower is better)
Translates to: AQLPVTCHMQPPYTERVTAHCNL*LPGFSD
Trigger: ATCACTGAAACCTGGGAGGCAGAGGTTGCAGTGAGC...TGTCACCCTCTCAGTGTATGGAGGTTGCATATGACAAGTAACTGGGAGCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp GTTCTGCAGGCTGTACAGGAAGCGTCACATAGGCATCTGCTTCTGGGGAGGCTTATGCCCCACTGCAATTaGTCATGCTGTTCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: VLQAVQEASHRHLLLGRLMPHCN*SCCSLP
Trigger: TGGAAGAGAACAGCATGAGCAATTGCAGTGGGGCAT...AAGCCTCCCCAGAAGCAGATGCCTATGTGACGCTTCCTGTACAGCCTGCAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CCA 90 bp CAAGAAGGCCCAGACATCTGTCAGCAAAGACCCTTGCCTGGTAAGACTGCCCTTAAAGGAGGTACCGACTaGGACCAACGAAAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: QEGPDICQQRPLPGKTALKGGTD*DQRKQR
Trigger: CCTTTGCTTTCGTTGGTCCCAGTCGGTACCTCCTTT...AAGGGCAGTCTTACCAGGCAAGGGTCTTTGCTGACAGATGTCTGGGCCTTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR TCA 90 bp GTTCTGCAGGCTGTACAGGAAGCGTCACATAGGCATCTGCTTCTGGGGAGGCTTCATCTCCTTTGCATGTaGAGAGAATCTATCTCCACC +
Preference number: 4 (lower is better)
Translates to: VLQAVQEASHRHLLLGRLHLLCM*RESIST
Trigger: GGTGGAGATAGATTCTCTTCACATGCAAAGGAGATG...AAGCCTCCCCAGAAGCAGATGCCTATGTGACGCTTCCTGTACAGCCTGCAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR TCA 90 bp CTGGGTCACCTAGGATGGTGGTATGTTGGCTTCACCACAAATTGTGGGAGTTTTCTGGGCCCTCCTTCCTaGGACTCTGATTCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: LGHLGWWYVGFTTNCGSFLGPPS*DSDSVG
Trigger: ACCTACTGAATCAGAGTCTCAGGAAGGAGGGCCCAG...AAAACTCCCACAATTTGTGGTGAAGCCAACATACCACCATCCTAGGTGACCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR TCA 90 bp CCAACCCTGGGTCACCTAGGATGGTGGTATGTTGGCTTCACCACAAATTGTGGGGATGCTGTTGATCTATaGTCTTACCCCCAACCCTGT +
Preference number: 4 (lower is better)
Translates to: PTLGHLGWWYVGFTTNCGDAVDL*SYPQPC
Trigger: ACAGGGTTGGGGGTAAGATCATAGATCAACAGCATC...CCCACAATTTGTGGTGAAGCCAACATACCACCATCCTAGGTGACCCAGGGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR TCA 90 bp GCCCAGCTCCCAGTTACTTGTCATATGCAACCTCCATACACTGAGAGGGTGACAGCCCATGCCTCCTTATaGAGAGAATCACCCTGGATA +
Preference number: 4 (lower is better)
Translates to: AQLPVTCHMQPPYTERVTAHASL*RESPWI
Trigger: TATCCAGGGTGATTCTCTTCATAAGGAGGCATGGGC...TGTCACCCTCTCAGTGTATGGAGGTTGCATATGACAAGTAACTGGGAGCTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR TCA 90 bp GACATACATCTTCCCTCAGCCTCTTGCCAGTTTTACAACCCAGGACTGTCTTTCGAACTCCTAACCTCATaGTCCACCCCCATCAGCCTC +
Preference number: 4 (lower is better)
Translates to: DIHLPSASCQFYNPGLSFELLTS*STPISL
Trigger: GAGGCTGATGGGGGTGGATCATGAGGTTAGGAGTTC...GAAAGACAGTCCTGGGTTGTAAAACTGGCAAGAGGCTGAGGGAAGATGTATGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp CTGGGTCACCTAGGATGGTGGTATGTTGGCTTCACCACAAATTGTGGGAGTTTTGCCCAGCCCGGGTTCTaGATTTCTAACAAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: LGHLGWWYVGFTTNCGSFAQPGF*ISNKPQ
Trigger: TTGGGGCTTGTTAGAAATGCAGAACCCGGGCTGGGC...AAAACTCCCACAATTTGTGGTGAAGCCAACATACCACCATCCTAGGTGACCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp GTCTTCTTGGATCCCAGCTGTGGGGCAGAGAGGAAATTTAACGCTTTAATTATTACAGGCGCGAGCCACTaGACCCGGCCTAGTACAGAG +
Preference number: 4 (lower is better)
Translates to: VFLDPSCGAERKFNALIITGASH*TRPSTE
Trigger: CTCTGTACTAGGCCGGGTGCAGTGGCTCGCGCCTGT...AATAATTAAAGCGTTAAATTTCCTCTCTGCCCCACAGCTGGGATCCAAGAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp GTTCTGCAGGCTGTACAGGAAGCGTCACATAGGCATCTGCTTCTGGGGAGGCTTTGGGACTGTTTTAGGTaGTGTGGACATAGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: VLQAVQEASHRHLLLGRLWDCFR*CGHSSD
Trigger: ATCACTGCTATGTCCACAGCACCTAAAACAGTCCCA...AAGCCTCCCCAGAAGCAGATGCCTATGTGACGCTTCCTGTACAGCCTGCAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CCA 90 bp GTTCTGCAGGCTGTACAGGAAGCGTCACATAGGCATCTGCTTCTGGGGAGGCTTCTCACAGGATCCACATaGCTTCTTGTTCTCAGTACT +
Preference number: 4 (lower is better)
Translates to: VLQAVQEASHRHLLLGRLLTGST*LLVLST
Trigger: AGTACTGAGAACAAGAAGCCATGTGGATCCTGTGAG...AAGCCTCCCCAGAAGCAGATGCCTATGTGACGCTTCCTGTACAGCCTGCAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CCA 90 bp GCCCAGCTCCCAGTTACTTGTCATATGCAACCTCCATACACTGAGAGGGTGACAATCCCACCTATGCTCTaGATTCTGGCCCTTCCATTC +
Preference number: 4 (lower is better)
Translates to: AQLPVTCHMQPPYTERVTIPPML*ILALPF
Trigger: GAATGGAAGGGCCAGAATCCAGAGCATAGGTGGGAT...TGTCACCCTCTCAGTGTATGGAGGTTGCATATGACAAGTAACTGGGAGCTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR TCA 90 bp CTGGGTCACCTAGGATGGTGGTATGTTGGCTTCACCACAAATTGTGGGAGTTTTTGGCCAGGCTGGTCTTaGACTCCTAACCTCATGATC +
Preference number: 4 (lower is better)
Translates to: LGHLGWWYVGFTTNCGSFWPGWS*TPNLMI
Trigger: GATCATGAGGTTAGGAGTTCAAGACCAGCCTGGCCA...AAAACTCCCACAATTTGTGGTGAAGCCAACATACCACCATCCTAGGTGACCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp CAAGAAGGCCCAGACATCTGTCAGCAAAGACCCTTGCCTGGTAAGACTGCCCTTTCATTCATGCCCCACTaGAATTGCTCATGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: QEGPDICQQRPLPGKTALSFMPH*NCSCCS
Trigger: AGAACAGCATGAGCAATTGCAGTGGGGCATGAATGA...AAGGGCAGTCTTACCAGGCAAGGGTCTTTGCTGACAGATGTCTGGGCCTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp GCCCAGCTCCCAGTTACTTGTCATATGCAACCTCCATACACTGAGAGGGTGACATGTATGGAACTCAACTaGTCTGCATCACCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: AQLPVTCHMQPPYTERVTCMELN*SASPPR
Trigger: CCTTGGAGGTGATGCAGAGCAGTTGAGTTCCATACA...TGTCACCCTCTCAGTGTATGGAGGTTGCATATGACAAGTAACTGGGAGCTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp GCTCGCATTAGGGTACTAAAAGATTTCCCCCATCAAGATGGCCTTCATGCTCCCATTGGCTCATGGTTCTaGAGGCTGTACAGGAAGCGT +
Preference number: 4 (lower is better)
Translates to: ARIRVLKDFPHQDGLHAPIGSWF*RLYRKR
Trigger: ACGCTTCCTGTACAGCCTGCAGAACCATGAGCCAAT...GGGAGCATGAAGGCCATCTTGATGGGGGAAATCTTTTAGTACCCTAATGCGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CCA 90 bp CAGCAACCTGGATTAATAACAGGGATCACACTGAACTCTGATACAGCTCTTCTGAAGCTGGCGACAGGGTaGGCCGTGACACACAGATGT +
Preference number: 4 (lower is better)
Translates to: QQPGLITGITLNSDTALLKLATG*AVTHRC
Trigger: ACATCTGTGTGTCACGGCCCACCCTGTCGCCAGCTT...CAGAAGAGCTGTATCAGAGTTCAGTGTGATCCCTGTTATTAATCCAGGTTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CCA 90 bp CAGCAACCTGGATTAATAACAGGGATCACACTGAACTCTGATACAGCTCTTCTGGGGACTATATACAGGTaGGCCCCACCATGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: QQPGLITGITLNSDTALLGTIYR*APPCLA
Trigger: AGCCAGGCATGGTGGGGCCCACCTGTATATAGTCCC...CAGAAGAGCTGTATCAGAGTTCAGTGTGATCCCTGTTATTAATCCAGGTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CCA 90 bp GTTCTGCAGGCTGTACAGGAAGCGTCACATAGGCATCTGCTTCTGGGGAGGCTTGAAGCCAAATCTGTATaGAACTCAACTGCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: VLQAVQEASHRHLLLGRLEAKSV*NSTALH
Trigger: ATGCAGAGCAGTTGAGTTCCATACAGATTTGGCTTC...AAGCCTCCCCAGAAGCAGATGCCTATGTGACGCTTCCTGTACAGCCTGCAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CCA 90 bp CAAGAAGGCCCAGACATCTGTCAGCAAAGACCCTTGCCTGGTAAGACTGCCCTTAACATGAGATTTGGGTaGGGACATCCAAACCACATC +
Preference number: 4 (lower is better)
Translates to: QEGPDICQQRPLPGKTALNMRFG*GHPNHI
Trigger: GATGTGGTTTGGATGTCCCCACCCAAATCTCATGTT...AAGGGCAGTCTTACCAGGCAAGGGTCTTTGCTGACAGATGTCTGGGCCTTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CCA 90 bp GTCTTCTTGGATCCCAGCTGTGGGGCAGAGAGGAAATTTAACGCTTTAATTATTGCCACAGGGTCTTCTTaGATCCCAGCTGTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: VFLDPSCGAERKFNALIIATGSS*IPAVGQ
Trigger: CTGCCCCACAGCTGGGATCCAAGAAGACCCTGTGGC...AATAATTAAAGCGTTAAATTTCCTCTCTGCCCCACAGCTGGGATCCAAGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR CAA 72 bp GTAACCTCAAAAGGAGATAGCACTCCTTTCTCCCACTaGCTGTGGGATGTGCCTAACTTTGGTGGGCACCTT +
Preference number: 4 (lower is better)
Translates to: VTSKGDSTPFSH*LWDVPNFGGHL
Trigger: AAGGTGCCCACCAAAGTTAGGCACATCCCACAGCAAGTGGGAGAAAGGAGTGCTATCTCCTTTTGAGGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR CAA 72 bp GTGGTGGCTCATGCCAAGCAGATGTTAGTGCCATGCTaGTACAGCCTACAGAACAGTGAGCCAAATAAACCC +
Preference number: 4 (lower is better)
Translates to: VVAHAKQMLVPC*YSLQNSEPNKP
Trigger: GGGTTTATTTGGCTCACTGTTCTGTAGGCTGTACAAGCATGGCACTAACATCTGCTTGGCATGAGCCACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp CCAACCCTGGGTCACCTAGGATGGTGGTATGTTGGCTTCACCACAAATTGTGGGAATGGCTTCCGGAAATaGATCTCTCACTACTTTCTC +
Preference number: 4 (lower is better)
Translates to: PTLGHLGWWYVGFTTNCGNGFRK*ISHYFL
Trigger: GAGAAAGTAGTGAGAGATGCATTTCCGGAAGCCATT...CCCACAATTTGTGGTGAAGCCAACATACCACCATCCTAGGTGACCCAGGGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp GCCCAGCTCCCAGTTACTTGTCATATGCAACCTCCATACACTGAGAGGGTGACAAAGGTCTTGCCATATTaGCTAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: AQLPVTCHMQPPYTERVTKVLPY*LGWSQT
Trigger: AGTTTGAGACCAGCCTAGGCAATATGGCAAGACCTT...TGTCACCCTCTCAGTGTATGGAGGTTGCATATGACAAGTAACTGGGAGCTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp TCTGCTATCAGTTACCTACAGCTTACAGAGTTGCAAGATAGCTCCCATAGAATCAACCCCACCACCCTCTaGTTCCAGGGAGGTGAGTTC +
Preference number: 4 (lower is better)
Translates to: SAISYLQLTELQDSSHRINPTTL*FQGGEF
Trigger: GAACTCACCTCCCTGGAAGCAGAGGGTGGTGGGGTT...GATTCTATGGGAGCTATCTTGCAACTCTGTAAGCTGTAGGTAACTGATAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp GACATACATCTTCCCTCAGCCTCTTGCCAGTTTTACAACCCAGGACTGTCTTTCCACCTTGCTCCAAGCTaGAGGACTACTTCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: DIHLPSASCQFYNPGLSFHLAPS*RTTSCH
Trigger: ATGACAGGAAGTAGTCCTGCAGCTTGGAGCAAGGTG...GAAAGACAGTCCTGGGTTGTAAAACTGGCAAGAGGCTGAGGGAAGATGTATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp AAAAGAGGTTTAATTGGCTCATGGTTCTGCAGGCTGTACAGGAAGCGTCACATAGGGTGTGGTGGCTCATaGCAAGCAGATGTTAGTGCC +
Preference number: 4 (lower is better)
Translates to: KRGLIGSWFCRLYRKRHIGCGGS*QADVSA
Trigger: GGCACTAACATCTGCTTGGCATGAGCCACCACACCC...TATGTGACGCTTCCTGTACAGCCTGCAGAACCATGAGCCAATTAAACCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CCA 90 bp CTGGGTCACCTAGGATGGTGGTATGTTGGCTTCACCACAAATTGTGGGAGTTTTGGTCACCTAGGATGGTaGTATGTTGGCTTCACCACA +
Preference number: 4 (lower is better)
Translates to: LGHLGWWYVGFTTNCGSFGHLGW*YVGFTT
Trigger: TGTGGTGAAGCCAACATACCACCATCCTAGGTGACC...AAAACTCCCACAATTTGTGGTGAAGCCAACATACCACCATCCTAGGTGACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CCA 90 bp CAGCAACCTGGATTAATAACAGGGATCACACTGAACTCTGATACAGCTCTTCTGTCTGTGCCTAATGGCTaGCTTATGGCCAGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: QQPGLITGITLNSDTALLSVPNG*LMARRG
Trigger: ACCCCTCCTGGCCATAAGCCAGCCATTAGGCACAGA...CAGAAGAGCTGTATCAGAGTTCAGTGTGATCCCTGTTATTAATCCAGGTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CCA 90 bp GCCCAGCTCCCAGTTACTTGTCATATGCAACCTCCATACACTGAGAGGGTGACACCTGTTTCCAGCATTTaGGAAATAGGAATCCCTCCT +
Preference number: 4 (lower is better)
Translates to: AQLPVTCHMQPPYTERVTPVSSI*EIGIPP
Trigger: AGGAGGGATTCCTATTTCCCAAATGCTGGAAACAGG...TGTCACCCTCTCAGTGTATGGAGGTTGCATATGACAAGTAACTGGGAGCTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CCA 90 bp GTAAATGAGGAAGAAAACATGATAATGGGATGGGTTTACAGTCTTGCAGGCTCATGCCCTTCTCACCCCTaGCCCAGTCTTGGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: VNEEENMIMGWVYSLAGSCPSHP*PSLGER
Trigger: CCTCTCTCCAAGACTGGGCCAGGGGTGAGAAGGGCA...TGAGCCTGCAAGACTGTAAACCCATCCCATTATCATGTTTTCTTCCTCATTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR CAA 72 bp GCTGGCACTGCTGGCATAGAAGCTGAAGCATCTCCTTaGCATGTGAAGAGAATCTATCTCCACCTATGTGTC +
Preference number: 4 (lower is better)
Translates to: AGTAGIEAEASP*HVKRIYLHLCV
Trigger: GACACATAGGTGGAGATAGATTCTCTTCACATGCAAAGGAGATGCTTCAGCTTCTATGCCAGCAGTGCCAGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR TCA 90 bp GTTCTGCAGGCTGTACAGGAAGCGTCACATAGGCATCTGCTTCTGGGGAGGCTTTCAGGTCCTTATCAGTaGGGTATAGCTAGTTTTAAT +
Preference number: 4 (lower is better)
Translates to: VLQAVQEASHRHLLLGRLSGPYQ*GIASFN
Trigger: ATTAAAACTAGCTATACCTCACTGATAAGGACCTGA...AAGCCTCCCCAGAAGCAGATGCCTATGTGACGCTTCCTGTACAGCCTGCAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp CAAGAAGGCCCAGACATCTGTCAGCAAAGACCCTTGCCTGGTAAGACTGCCCTTTGTTTCCTTAGTCAATaGTACGGCTTCAGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: QEGPDICQQRPLPGKTALCFLSQ*YGFSVC
Trigger: ACAAACACTGAAGCCGTAGCATTGACTAAGGAAACA...AAGGGCAGTCTTACCAGGCAAGGGTCTTTGCTGACAGATGTCTGGGCCTTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp GGCATTCCCTCATCAAACAGCGTTTTTACTGACATCCCTGTCCCAAATATAGATCACAGCATGAATGACTaGTTCCTCCTCACCCCGGTC +
Preference number: 4 (lower is better)
Translates to: GIPSSNSVFTDIPVPNIDHSMND*FLLTPV
Trigger: GACCGGGGTGAGGAGGAAGCAGTCATTCATGCTGTG...ATCTATATTTGGGACAGGGATGTCAGTAAAAACGCTGTTTGATGAGGGAATGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp CAGACAATGCATAGTTTTCCACTGAAGTACAATGGGATCTCCCCCTACACTTCCCTTCCCTCAGCCTCTTaGCAGTTTTACAACCCAGGA +
Preference number: 4 (lower is better)
Translates to: QTMHSFPLKYNGISPYTSLPSAS*QFYNPG
Trigger: TCCTGGGTTGTAAAACTGGCAAGAGGCTGAGGGAAG...GGAAGTGTAGGGGGAGATCCCATTGTACTTCAGTGGAAAACTATGCATTGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp TCTGCTATCAGTTACCTACAGCTTACAGAGTTGCAAGATAGCTCCCATAGAATCCGTCACATAGGCATCTaGTTCTGGGGAGGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SAISYLQLTELQDSSHRIRHIGI*FWGGFR
Trigger: CCTGAAGCCTCCCCAGAAGCAGATGCCTATGTGACG...GATTCTATGGGAGCTATCTTGCAACTCTGTAAGCTGTAGGTAACTGATAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp CAGACAATGCATAGTTTTCCACTGAAGTACAATGGGATCTCCCCCTACACTTCCACACAATCCCACCTATaGTCTGGATTCTGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: QTMHSFPLKYNGISPYTSTQSHL*SGFWPF
Trigger: GAAGGGCCAGAATCCAGAGCATAGGTGGGATTGTGT...GGAAGTGTAGGGGGAGATCCCATTGTACTTCAGTGGAAAACTATGCATTGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CCA 90 bp CAGCAACCTGGATTAATAACAGGGATCACACTGAACTCTGATACAGCTCTTCTGGACAGCCCCTATAAATaGAGACTCAGCCCATGCCTC +
Preference number: 4 (lower is better)
Translates to: QQPGLITGITLNSDTALLDSPYK*RLSPCL
Trigger: GAGGCATGGGCTGAGTCTCCATTTATAGGGGCTGTC...CAGAAGAGCTGTATCAGAGTTCAGTGTGATCCCTGTTATTAATCCAGGTTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CCA 90 bp GCCCAGCTCCCAGTTACTTGTCATATGCAACCTCCATACACTGAGAGGGTGACAAACATGATAATGGGATaGGTTTACAGTCTTGCAGGC +
Preference number: 4 (lower is better)
Translates to: AQLPVTCHMQPPYTERVTNMIMG*VYSLAG
Trigger: GCCTGCAAGACTGTAAACCCATCCCATTATCATGTT...TGTCACCCTCTCAGTGTATGGAGGTTGCATATGACAAGTAACTGGGAGCTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CCA 90 bp CTGGGTCACCTAGGATGGTGGTATGTTGGCTTCACCACAAATTGTGGGAGTTTTTTCTCCCACTTGCTGTaGGATGTGCCTAACTTTGGT +
Preference number: 4 (lower is better)
Translates to: LGHLGWWYVGFTTNCGSFFSHLL*DVPNFG
Trigger: ACCAAAGTTAGGCACATCCCACAGCAAGTGGGAGAA...AAAACTCCCACAATTTGTGGTGAAGCCAACATACCACCATCCTAGGTGACCCAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR TCA 90 bp CCAGAAAGATCCAGGTTGGAAAACCAATTCAGCTACTTACTAATGGGGCAATTTAGCCTCCCGAATAACTaGGACTACAGGTGCGTGCCA +
Preference number: 4 (lower is better)
Translates to: PERSRLENQFSYLLMGQFSLPNN*DYRCVP
Trigger: TGGCACGCACCTGTAGTCTCAGTTATTCGGGAGGCT...AAATTGCCCCATTAGTAAGTAGCTGAATTGGTTTTCCAACCTGGATCTTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR TCA 90 bp GCTCGCATTAGGGTACTAAAAGATTTCCCCCATCAAGATGGCCTTCATGCTCCCGGCTCAAATCAACTGTaGGAATCAGGTAATGTGCAA +
Preference number: 4 (lower is better)
Translates to: ARIRVLKDFPHQDGLHAPGSNQL*ESGNVQ
Trigger: TTGCACATTACCTGATTCTCACAGTTGATTTGAGCC...GGGAGCATGAAGGCCATCTTGATGGGGGAAATCTTTTAGTACCCTAATGCGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR TCA 90 bp GTCTTCTTGGATCCCAGCTGTGGGGCAGAGAGGAAATTTAACGCTTTAATTATTAGTAGGAACAAGGGGTaGGGAGAGTTGCCTCACACT +
Preference number: 4 (lower is better)
Translates to: VFLDPSCGAERKFNALIISRNKG*GELPHT
Trigger: AGTGTGAGGCAACTCTCCTCACCCCTTGTTCCTACT...AATAATTAAAGCGTTAAATTTCCTCTCTGCCCCACAGCTGGGATCCAAGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR TCA 90 bp GGCATTCCCTCATCAAACAGCGTTTTTACTGACATCCCTGTCCCAAATATAGATAGTCATGGCAGTAGGTaGAAAGGGAGCAAGCACCTC +
Preference number: 4 (lower is better)
Translates to: GIPSSNSVFTDIPVPNIDSHGSR*KGSKHL
Trigger: GAGGTGCTTGCTCCCTTTTCACCTACTGCCATGACT...ATCTATATTTGGGACAGGGATGTCAGTAAAAACGCTGTTTGATGAGGGAATGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp ATCATATACTATTACTTGTCAGCCCACACAATCCCACCTATGCTCTGGATTCTGGAGACTACAGGTGCGTaGCACCATGCCCTACTAACT +
Preference number: 4 (lower is better)
Translates to: IIYYYLSAHTIPPMLWILETTGA*HHALLT
Trigger: AGTTAGTAGGGCATGGTGGCACGCACCTGTAGTCTC...CAGAATCCAGAGCATAGGTGGGATTGTGTGGGCTGACAAGTAATAGTATATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp CAGCAACCTGGATTAATAACAGGGATCACACTGAACTCTGATACAGCTCTTCTGATCCACCCATCTCTGTaGCTAATGGCTGGCTTATGG +
Preference number: 4 (lower is better)
Translates to: QQPGLITGITLNSDTALLIHPSL*LMAGLW
Trigger: CCATAAGCCAGCCATTAGGCACAGAGATGGGTGGAT...CAGAAGAGCTGTATCAGAGTTCAGTGTGATCCCTGTTATTAATCCAGGTTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp CCAACCCTGGGTCACCTAGGATGGTGGTATGTTGGCTTCACCACAAATTGTGGGGAGAAATCACATTGTTaGTGTGTCTGTGTAGAAAGA +
Preference number: 4 (lower is better)
Translates to: PTLGHLGWWYVGFTTNCGEKSHC*CVCVER
Trigger: TCTTTCTACACAGACACAGCAACAATGTGATTTCTC...CCCACAATTTGTGGTGAAGCCAACATACCACCATCCTAGGTGACCCAGGGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp CAGACAATGCATAGTTTTCCACTGAAGTACAATGGGATCTCCCCCTACACTTCCTGGAGACTCAGCCCATaGCTCCTTATGAAGAGAATC +
Preference number: 4 (lower is better)
Translates to: QTMHSFPLKYNGISPYTSWRLSP*LLMKRI
Trigger: GATTCTCTTCATAAGGAGGCATGGGCTGAGTCTCCA...GGAAGTGTAGGGGGAGATCCCATTGTACTTCAGTGGAAAACTATGCATTGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp AAAAGAGGTTTAATTGGCTCATGGTTCTGCAGGCTGTACAGGAAGCGTCACATACTCCTTTCTCCCACTTaGTGTGGGATGTGCCTAACT +
Preference number: 4 (lower is better)
Translates to: KRGLIGSWFCRLYRKRHILLSPT*CGMCLT
Trigger: AGTTAGGCACATCCCACAGCAAGTGGGAGAAAGGAG...TATGTGACGCTTCCTGTACAGCCTGCAGAACCATGAGCCAATTAAACCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp GCTCGCATTAGGGTACTAAAAGATTTCCCCCATCAAGATGGCCTTCATGCTCCCCACTGGAGATTACATTaGAACATGAGATTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: ARIRVLKDFPHQDGLHAPHWRLH*NMRFGW
Trigger: CCACCCAAATCTCATGTTGCAATGTAATCTCCAGTG...GGGAGCATGAAGGCCATCTTGATGGGGGAAATCTTTTAGTACCCTAATGCGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp GACATACATCTTCCCTCAGCCTCTTGCCAGTTTTACAACCCAGGACTGTCTTTCTATACCCTCCCTCTCTaGCAACAACATCATCATCTG +
Preference number: 4 (lower is better)
Translates to: DIHLPSASCQFYNPGLSFYTLPL*QQHHHL
Trigger: CAGATGATGATGTTGTTGGCAGAGAGGGAGGGTATA...GAAAGACAGTCCTGGGTTGTAAAACTGGCAAGAGGCTGAGGGAAGATGTATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp GGCATTCCCTCATCAAACAGCGTTTTTACTGACATCCCTGTCCCAAATATAGATGTCAGCAAAGACCCTTaGCTGGTAAGACTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: GIPSSNSVFTDIPVPNIDVSKDP*LVRLPF
Trigger: GAAGGGCAGTCTTACCAGGCAAGGGTCTTTGCTGAC...ATCTATATTTGGGACAGGGATGTCAGTAAAAACGCTGTTTGATGAGGGAATGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp TTCTTCAAATACGCCCTCCATTCCACTATACCTCCCATTCACTCCAAGACCTTCTCAGCTTTAAACACCTaGTGTCAAGAAGGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: FFKYALHSTIPPIHSKTFSALNT*CQEGPD
Trigger: GTCTGGGCCTTCTTGACAGCAGGTGTTTAAAGCTGA...GAAGGTCTTGGAGTGAATGGGAGGTATAGTGGAATGGAGGGCGTATTTGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp CAGACAATGCATAGTTTTCCACTGAAGTACAATGGGATCTCCCCCTACACTTCCCAAATTTCTTACTACTaGTTCCACCCAGTTCCCCGC +
Preference number: 4 (lower is better)
Translates to: QTMHSFPLKYNGISPYTSQISYY*FHPVPR
Trigger: GCGGGGAACTGGGTGGAAGCAGTAGTAAGAAATTTG...GGAAGTGTAGGGGGAGATCCCATTGTACTTCAGTGGAAAACTATGCATTGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp CAAGAAGGCCCAGACATCTGTCAGCAAAGACCCTTGCCTGGTAAGACTGCCCTTTTTTCCCCAATCAGATaGTATAAAGCTGTCACTTCT +
Preference number: 4 (lower is better)
Translates to: QEGPDICQQRPLPGKTALFSPIR*YKAVTS
Trigger: AGAAGTGACAGCTTTATAGCATCTGATTGGGGAAAA...AAGGGCAGTCTTACCAGGCAAGGGTCTTTGCTGACAGATGTCTGGGCCTTCTTG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CCA 90 bp CCAGAAAGATCCAGGTTGGAAAACCAATTCAGCTACTTACTAATGGGGCAATTTCTAATGGCTGGCTTATaGCCAGGAGGGGTGTCATCC +
Preference number: 4 (lower is better)
Translates to: PERSRLENQFSYLLMGQFLMAGL*PGGVSS
Trigger: GGATGACACCCCTCCTGGCCATAAGCCAGCCATTAG...AAATTGCCCCATTAGTAAGTAGCTGAATTGGTTTTCCAACCTGGATCTTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CCA 90 bp GTAAATGAGGAAGAAAACATGATAATGGGATGGGTTTACAGTCTTGCAGGCTCACCTCAGTCTCCCTCCTaGGCTGGGACTATATACAGG +
Preference number: 4 (lower is better)
Translates to: VNEEENMIMGWVYSLAGSPQSPS*AGTIYR
Trigger: CCTGTATATAGTCCCAGCCCAGGAGGGAGACTGAGG...TGAGCCTGCAAGACTGTAAACCCATCCCATTATCATGTTTTCTTCCTCATTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CCA 90 bp CAGACAATGCATAGTTTTCCACTGAAGTACAATGGGATCTCCCCCTACACTTCCGGTTTAATTGGCTCATaGTTCTGCAGGCTGTACAGG +
Preference number: 4 (lower is better)
Translates to: QTMHSFPLKYNGISPYTSGLIGS*FCRLYR
Trigger: CCTGTACAGCCTGCAGAACCATGAGCCAATTAAACC...GGAAGTGTAGGGGGAGATCCCATTGTACTTCAGTGGAAAACTATGCATTGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR CAA 72 bp AGTTCCCCTTTGAGACATACATCTTCCCTCAGCCTCTaGCCAGTTTTACAACCCAGGACTGTCTTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: SSPLRHTSSLSL*PVLQPRTVFLK
Trigger: CTTGAGAAAGACAGTCCTGGGTTGTAAAACTGGCAAGAGGCTGAGGGAAGATGTATGTCTCAAAGGGGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR TCA 90 bp ATCATATACTATTACTTGTCAGCCCACACAATCCCACCTATGCTCTGGATTCTGGGGAGGAACAATCTGTaGGCCACAGCAAAGATGTAC +
Preference number: 4 (lower is better)
Translates to: IIYYYLSAHTIPPMLWILGRNNL*ATAKMY
Trigger: GTACATCTTTGCTGTGGCTCACAGATTGTTCCTCCC...CAGAATCCAGAGCATAGGTGGGATTGTGTGGGCTGACAAGTAATAGTATATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR TCA 90 bp AAAAGAGGTTTAATTGGCTCATGGTTCTGCAGGCTGTACAGGAAGCGTCACATAGCAATTTCATGTCTGTaGTGTGCATCCGCTCCACTT +
Preference number: 4 (lower is better)
Translates to: KRGLIGSWFCRLYRKRHIAISCL*CASAPL
Trigger: AAGTGGAGCGGATGCACATCACAGACATGAAATTGC...TATGTGACGCTTCCTGTACAGCCTGCAGAACCATGAGCCAATTAAACCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR TCA 90 bp TCTGCTATCAGTTACCTACAGCTTACAGAGTTGCAAGATAGCTCCCATAGAATCTCCAGTGAAACACAATaGCCAACCCTGGGTCACCTA +
Preference number: 4 (lower is better)
Translates to: SAISYLQLTELQDSSHRISSETQ*PTLGHL
Trigger: TAGGTGACCCAGGGTTGGTCATTGTGTTTCACTGGA...GATTCTATGGGAGCTATCTTGCAACTCTGTAAGCTGTAGGTAACTGATAGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR TCA 90 bp ATCATATACTATTACTTGTCAGCCCACACAATCCCACCTATGCTCTGGATTCTGGCCTTGGGATGCTGTTaGTCTATGATCTTACCCCCA +
Preference number: 4 (lower is better)
Translates to: IIYYYLSAHTIPPMLWILALGCC*SMILPP
Trigger: TGGGGGTAAGATCATAGATCAACAGCATCCCAAGGC...CAGAATCCAGAGCATAGGTGGGATTGTGTGGGCTGACAAGTAATAGTATATGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR TCA 90 bp TTCTTCAAATACGCCCTCCATTCCACTATACCTCCCATTCACTCCAAGACCTTCGGAATGTCTTCCTCCTaGGCATCCTTAAATCCTTTC +
Preference number: 4 (lower is better)
Translates to: FFKYALHSTIPPIHSKTFGMSSS*ASLNPF
Trigger: GAAAGGATTTAAGGATGCTCAGGAGGAAGACATTCC...GAAGGTCTTGGAGTGAATGGGAGGTATAGTGGAATGGAGGGCGTATTTGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR TCA 90 bp AAGCTGTGGGAAATACACAGGAGGGCCAAGGAAGAACATGAACGGAATTTAAAGCCAATATTAGGCACCTaGCTTCCCTTAGAGCATCAG +
Preference number: 4 (lower is better)
Translates to: KLWEIHRRAKEEHERNLKPILGT*LPLEHQ
Trigger: CTGATGCTCTAAGGGAAGTCAGGTGCCTAATATTGG...CTTTAAATTCCGTTCATGTTCTTCCTTGGCCCTCCTGTGTATTTCCCACAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp TCTGCTATCAGTTACCTACAGCTTACAGAGTTGCAAGATAGCTCCCATAGAATCCCACCCACTCATTCATaGCCCACTGCAATTGCTCAT +
Preference number: 4 (lower is better)
Translates to: SAISYLQLTELQDSSHRIPPTHS*PTAIAH
Trigger: ATGAGCAATTGCAGTGGGGCATGAATGAGTGGGTGG...GATTCTATGGGAGCTATCTTGCAACTCTGTAAGCTGTAGGTAACTGATAGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CCA 90 bp CAGACAATGCATAGTTTTCCACTGAAGTACAATGGGATCTCCCCCTACACTTCCTTGCAACATGAGATTTaGGTGGGGACATCCAAACCA +
Preference number: 4 (lower is better)
Translates to: QTMHSFPLKYNGISPYTSLQHEI*VGTSKP
Trigger: TGGTTTGGATGTCCCCACCCAAATCTCATGTTGCAA...GGAAGTGTAGGGGGAGATCCCATTGTACTTCAGTGGAAAACTATGCATTGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CCA 90 bp TTCTTCAAATACGCCCTCCATTCCACTATACCTCCCATTCACTCCAAGACCTTCCCCCAACTCCAACACTaGAGATTACATTGCAACATG +
Preference number: 4 (lower is better)
Translates to: FFKYALHSTIPPIHSKTFPQLQH*RLHCNM
Trigger: CATGTTGCAATGTAATCTCCAGTGTTGGAGTTGGGG...GAAGGTCTTGGAGTGAATGGGAGGTATAGTGGAATGGAGGGCGTATTTGAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR TCA 90 bp GACATACATCTTCCCTCAGCCTCTTGCCAGTTTTACAACCCAGGACTGTCTTTCTTACTGCAAGGGGTTTaGGAATCTATGGACAATGTT +
Preference number: 4 (lower is better)
Translates to: DIHLPSASCQFYNPGLSFLLQGV*ESMDNV
Trigger: AACATTGTCCATAGATTCTCAAACCCCTTGCAGTAA...GAAAGACAGTCCTGGGTTGTAAAACTGGCAAGAGGCTGAGGGAAGATGTATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR TCA 90 bp GGCATTCCCTCATCAAACAGCGTTTTTACTGACATCCCTGTCCCAAATATAGATTTCTCTTCCACAGCATaGATGACTGCTTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GIPSSNSVFTDIPVPNIDFSSTA*MTASSS
Trigger: TGAGGAGGAAGCAGTCATTCATGCTGTGGAAGAGAA...ATCTATATTTGGGACAGGGATGTCAGTAAAAACGCTGTTTGATGAGGGAATGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR TCA 90 bp AAAAGAGGTTTAATTGGCTCATGGTTCTGCAGGCTGTACAGGAAGCGTCACATACAAAGAGAGGTCAAGTaGCTTGTCCAATCTCACAAC +
Preference number: 4 (lower is better)
Translates to: KRGLIGSWFCRLYRKRHIQREVK*LVQSHN
Trigger: GTTGTGAGATTGGACAAGTCACTTGACCTCTCTTTG...TATGTGACGCTTCCTGTACAGCCTGCAGAACCATGAGCCAATTAAACCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp AAGCTGTGGGAAATACACAGGAGGGCCAAGGAAGAACATGAACGGAATTTAAAGTTCATGTCTGTGATGTaGATCCGCTCCACTTTATCC +
Preference number: 4 (lower is better)
Translates to: KLWEIHRRAKEEHERNLKFMSVM*IRSTLS
Trigger: GGATAAAGTGGAGCGGATGCACATCACAGACATGAA...CTTTAAATTCCGTTCATGTTCTTCCTTGGCCCTCCTGTGTATTTCCCACAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp TCTGCTATCAGTTACCTACAGCTTACAGAGTTGCAAGATAGCTCCCATAGAATCCAGTCCAAGCTGAAGTaGAGTGGCACTATCATAGCT +
Preference number: 4 (lower is better)
Translates to: SAISYLQLTELQDSSHRIQSKLK*SGTIIA
Trigger: AGCTATGATAGTGCCACTGCACTTCAGCTTGGACTG...GATTCTATGGGAGCTATCTTGCAACTCTGTAAGCTGTAGGTAACTGATAGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp TCTGCTATCAGTTACCTACAGCTTACAGAGTTGCAAGATAGCTCCCATAGAATCGGAACTCAACTGCTCTaGATCACCTCCAAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: SAISYLQLTELQDSSHRIGTQLL*ITSKVK
Trigger: CTTTACCTTGGAGGTGATGCAGAGCAGTTGAGTTCC...GATTCTATGGGAGCTATCTTGCAACTCTGTAAGCTGTAGGTAACTGATAGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CCA 90 bp AAGCTGTGGGAAATACACAGGAGGGCCAAGGAAGAACATGAACGGAATTTAAAGATAATTCCTAAGTGCTaGCACTGCTGGCATAGAAGC +
Preference number: 4 (lower is better)
Translates to: KLWEIHRRAKEEHERNLKIIPKC*HCWHRS
Trigger: GCTTCTATGCCAGCAGTGCCAGCACTTAGGAATTAT...CTTTAAATTCCGTTCATGTTCTTCCTTGGCCCTCCTGTGTATTTCCCACAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CCA 90 bp CCAGAAAGATCCAGGTTGGAAAACCAATTCAGCTACTTACTAATGGGGCAATTTGGCAGAAAGGGCAGGTaGAGAACTTACCTTCAACAC +
Preference number: 4 (lower is better)
Translates to: PERSRLENQFSYLLMGQFGRKGR*RTYLQH
Trigger: GTGTTGAAGGTAAGTTCTCCACCTGCCCTTTCTGCC...AAATTGCCCCATTAGTAAGTAGCTGAATTGGTTTTCCAACCTGGATCTTTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR TCA 90 bp GTAAATGAGGAAGAAAACATGATAATGGGATGGGTTTACAGTCTTGCAGGCTCATGCTGGCATAGAAGCTaGAGCATCTCCTTTGCATGT +
Preference number: 4 (lower is better)
Translates to: VNEEENMIMGWVYSLAGSCWHRS*SISFAC
Trigger: ACATGCAAAGGAGATGCTTCAGCTTCTATGCCAGCA...TGAGCCTGCAAGACTGTAAACCCATCCCATTATCATGTTTTCTTCCTCATTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR TCA 90 bp TTCTTCAAATACGCCCTCCATTCCACTATACCTCCCATTCACTCCAAGACCTTCAAACAGCGTTTTTACTaGCATCCCTGTCCCAAATAT +
Preference number: 4 (lower is better)
Translates to: FFKYALHSTIPPIHSKTFKQRFY*HPCPKY
Trigger: ATATTTGGGACAGGGATGTCAGTAAAAACGCTGTTT...GAAGGTCTTGGAGTGAATGGGAGGTATAGTGGAATGGAGGGCGTATTTGAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR TCA 90 bp ATCATATACTATTACTTGTCAGCCCACACAATCCCACCTATGCTCTGGATTCTGGGAGTAGCTCACTGTTaGCCGTTTTGGGATAAAAAG +
Preference number: 4 (lower is better)
Translates to: IIYYYLSAHTIPPMLWILGVAHC*PFWDKK
Trigger: CTTTTTATCCCAAAACGGTCAACAGTGAGCTACTCC...CAGAATCCAGAGCATAGGTGGGATTGTGTGGGCTGACAAGTAATAGTATATGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR TCA 90 bp GTCTTCTTGGATCCCAGCTGTGGGGCAGAGAGGAAATTTAACGCTTTAATTATTCTAAAATGCAGATTCTaGTTCAACACGCCTGGGACA +
Preference number: 4 (lower is better)
Translates to: VFLDPSCGAERKFNALIILKCRF*FNTPGT
Trigger: TGTCCCAGGCGTGTTGAATCAGAATCTGCATTTTAG...AATAATTAAAGCGTTAAATTTCCTCTCTGCCCCACAGCTGGGATCCAAGAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR TCA 90 bp TCTGCTATCAGTTACCTACAGCTTACAGAGTTGCAAGATAGCTCCCATAGAATCGATCACACTGAACTCTaGTACAGCTCTTCTGTATGG +
Preference number: 4 (lower is better)
Translates to: SAISYLQLTELQDSSHRIDHTEL*YSSSVW
Trigger: CCATACAGAAGAGCTGTATCAGAGTTCAGTGTGATC...GATTCTATGGGAGCTATCTTGCAACTCTGTAAGCTGTAGGTAACTGATAGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR TCA 90 bp GACATACATCTTCCCTCAGCCTCTTGCCAGTTTTACAACCCAGGACTGTCTTTCAAGAACTCACTATCTTaGGGATTGTACCAAGAGAAT +
Preference number: 4 (lower is better)
Translates to: DIHLPSASCQFYNPGLSFKNSLS*GLYQEN
Trigger: ATTCTCTTGGTACAATCCTCAAGATAGTGAGTTCTT...GAAAGACAGTCCTGGGTTGTAAAACTGGCAAGAGGCTGAGGGAAGATGTATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp GACATACATCTTCCCTCAGCCTCTTGCCAGTTTTACAACCCAGGACTGTCTTTCTCTCATACTGTAATGTaGATACAAATCTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: DIHLPSASCQFYNPGLSFSHTVM*IQISWR
Trigger: TCTCCAGGAGATTTGTATGCACATTACAGTATGAGA...GAAAGACAGTCCTGGGTTGTAAAACTGGCAAGAGGCTGAGGGAAGATGTATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp AATGATAATGGCTCACATTTACTTAGTTCTTATTATGTGCAGGGCTCAGCATTTCTTTGGTGGGCACCTTaGTCCAAGCTGCAGGACTAC +
Preference number: 4 (lower is better)
Translates to: NDNGSHLLSSYYVQGSAFLWWAP*SKLQDY
Trigger: GTAGTCCTGCAGCTTGGAGCAAGGTGCCCACCAAAG...AAATGCTGAGCCCTGCACATAATAAGAACTAAGTAAATGTGAGCCATTATCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CCA 90 bp ATCATATACTATTACTTGTCAGCCCACACAATCCCACCTATGCTCTGGATTCTGAGGATGGTGGTATGTTaGCTTCACCACAAATTGTGG +
Preference number: 4 (lower is better)
Translates to: IIYYYLSAHTIPPMLWILRMVVC*LHHKLW
Trigger: CCACAATTTGTGGTGAAGCCAACATACCACCATCCT...CAGAATCCAGAGCATAGGTGGGATTGTGTGGGCTGACAAGTAATAGTATATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CCA 90 bp GTCTTCTTGGATCCCAGCTGTGGGGCAGAGAGGAAATTTAACGCTTTAATTATTAATGCTGGTGATCTATaGACCACACTTGGAGTAGCT +
Preference number: 4 (lower is better)
Translates to: VFLDPSCGAERKFNALIINAGDL*TTLGVA
Trigger: AGCTACTCCAAGTGTGGTCCATAGATCACCAGCATT...AATAATTAAAGCGTTAAATTTCCTCTCTGCCCCACAGCTGGGATCCAAGAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CCA 90 bp AAAAGAGGTTTAATTGGCTCATGGTTCTGCAGGCTGTACAGGAAGCGTCACATAGAAAAGAGGTTTAATTaGCTCATGGTTCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: KRGLIGSWFCRLYRKRHIEKRFN*LMVLQA
Trigger: AGCCTGCAGAACCATGAGCCAATTAAACCTCTTTTC...TATGTGACGCTTCCTGTACAGCCTGCAGAACCATGAGCCAATTAAACCTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR TCA 90 bp AATGATAATGGCTCACATTTACTTAGTTCTTATTATGTGCAGGGCTCAGCATTTTCCTTCCTGAGACTCTaGTTCAGTAGGTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: NDNGSHLLSSYYVQGSAFSFLRL*FSRSGV
Trigger: CACCCCAGACCTACTGAATCAGAGTCTCAGGAAGGA...AAATGCTGAGCCCTGCACATAATAAGAACTAAGTAAATGTGAGCCATTATCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp GTCTTCTTGGATCCCAGCTGTGGGGCAGAGAGGAAATTTAACGCTTTAATTATTATGGGTTTACAGTCTTaGAGGCTCAAATCAACTGTG +
Preference number: 4 (lower is better)
Translates to: VFLDPSCGAERKFNALIIMGLQS*RLKSTV
Trigger: CACAGTTGATTTGAGCCTGCAAGACTGTAAACCCAT...AATAATTAAAGCGTTAAATTTCCTCTCTGCCCCACAGCTGGGATCCAAGAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp AAGCTGTGGGAAATACACAGGAGGGCCAAGGAAGAACATGAACGGAATTTAAAGTACAGCTTACAGAGTTaGAAGATAGCTCCCATAGAA +
Preference number: 4 (lower is better)
Translates to: KLWEIHRRAKEEHERNLKYSLQS*KIAPIE
Trigger: TTCTATGGGAGCTATCTTGCAACTCTGTAAGCTGTA...CTTTAAATTCCGTTCATGTTCTTCCTTGGCCCTCCTGTGTATTTCCCACAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp CTGGGTCACCTAGGATGGTGGTATGTTGGCTTCACCACAAATTGTGGGAGTTTTAGAATTATTTTGCTCTaGTATCAGTTACCTACAGCT +
Preference number: 4 (lower is better)
Translates to: LGHLGWWYVGFTTNCGSFRIILL*YQLPTA
Trigger: AGCTGTAGGTAACTGATAGCAGAGCAAAATAATTCT...AAAACTCCCACAATTTGTGGTGAAGCCAACATACCACCATCCTAGGTGACCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CCA 90 bp CAGACAATGCATAGTTTTCCACTGAAGTACAATGGGATCTCCCCCTACACTTCCTCAGGTACTCCTTTATaGCAATACAAAATGGACTCA +
Preference number: 4 (lower is better)
Translates to: QTMHSFPLKYNGISPYTSSGTPL*QYKMDS
Trigger: TGAGTCCATTTTGTATTGCCATAAAGGAGTACCTGA...GGAAGTGTAGGGGGAGATCCCATTGTACTTCAGTGGAAAACTATGCATTGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR TCA 90 bp AATGATAATGGCTCACATTTACTTAGTTCTTATTATGTGCAGGGCTCAGCATTTTCTAAGCCAGGCAGGTaGGGCAATTTCATGTCTGTG +
Preference number: 4 (lower is better)
Translates to: NDNGSHLLSSYYVQGSAFSKPGR*GNFMSV
Trigger: CACAGACATGAAATTGCCTCACCTGCCTGGCTTAGA...AAATGCTGAGCCCTGCACATAATAAGAACTAAGTAAATGTGAGCCATTATCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR TCA 90 bp CCAGAAAGATCCAGGTTGGAAAACCAATTCAGCTACTTACTAATGGGGCAATTTAGGGGAACCATTCTCTaGAATGTAACCTCAAAAGGA +
Preference number: 4 (lower is better)
Translates to: PERSRLENQFSYLLMGQFRGTIL*NVTSKG
Trigger: TCCTTTTGAGGTTACATTTCAGAGAATGGTTCCCCT...AAATTGCCCCATTAGTAAGTAGCTGAATTGGTTTTCCAACCTGGATCTTTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp TCTGCTATCAGTTACCTACAGCTTACAGAGTTGCAAGATAGCTCCCATAGAATCCAGTTACTTGTCATATaGAACCTCCATACACTGAGA +
Preference number: 4 (lower is better)
Translates to: SAISYLQLTELQDSSHRIQLLVI*NLHTLR
Trigger: TCTCAGTGTATGGAGGTTGCATATGACAAGTAACTG...GATTCTATGGGAGCTATCTTGCAACTCTGTAAGCTGTAGGTAACTGATAGCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CCA 90 bp GTCTTCTTGGATCCCAGCTGTGGGGCAGAGAGGAAATTTAACGCTTTAATTATTCAGGAAACAAATGTATaGACTCAGATGGGCATGATA +
Preference number: 4 (lower is better)
Translates to: VFLDPSCGAERKFNALIIQETNV*TQMGMI
Trigger: TATCATGCCCATCTGAGTCCATACATTTGTTTCCTG...AATAATTAAAGCGTTAAATTTCCTCTCTGCCCCACAGCTGGGATCCAAGAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CCA 90 bp GTCTTCTTGGATCCCAGCTGTGGGGCAGAGAGGAAATTTAACGCTTTAATTATTCAGAAAGATCCAGGTTaGAAAACCAATTCAGCTACT +
Preference number: 4 (lower is better)
Translates to: VFLDPSCGAERKFNALIIQKDPG*KTNSAT
Trigger: AGTAGCTGAATTGGTTTTCCAACCTGGATCTTTCTG...AATAATTAAAGCGTTAAATTTCCTCTCTGCCCCACAGCTGGGATCCAAGAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR TCA 90 bp ATCATATACTATTACTTGTCAGCCCACACAATCCCACCTATGCTCTGGATTCTGCCTCACACTTTTAAATaGCCAGATCTTGTAAGAACT +
Preference number: 4 (lower is better)
Translates to: IIYYYLSAHTIPPMLWILPHTFK*PDLVRT
Trigger: AGTTCTTACAAGATCTGGTCATTTAAAAGTGTGAGG...CAGAATCCAGAGCATAGGTGGGATTGTGTGGGCTGACAAGTAATAGTATATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp AAAAGAGGTTTAATTGGCTCATGGTTCTGCAGGCTGTACAGGAAGCGTCACATACTTCTCAGAGATCTTTaGATATATTCCCATATATGC +
Preference number: 4 (lower is better)
Translates to: KRGLIGSWFCRLYRKRHILLRDL*IYSHIC
Trigger: GCATATATGGGAATATATGCAAAGATCTCTGAGAAG...TATGTGACGCTTCCTGTACAGCCTGCAGAACCATGAGCCAATTAAACCTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CCA 90 bp ATCATATACTATTACTTGTCAGCCCACACAATCCCACCTATGCTCTGGATTCTGTGTTTACTCTTCCTTTaGATAAAGCCAATCAGCAAA +
Preference number: 4 (lower is better)
Translates to: IIYYYLSAHTIPPMLWILCLLFL*IKPISK
Trigger: TTTGCTGATTGGCTTTATCCAAAGGAAGAGTAAACA...CAGAATCCAGAGCATAGGTGGGATTGTGTGGGCTGACAAGTAATAGTATATGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR CAA 72 bp TTTTGCTCTGCTATCAGTTACCTACAGCTTACAGAGTaGCAAGATAGCTCCCATAGAATCAAAATCAAACAG +
Preference number: 4 (lower is better)
Translates to: FCSAISYLQLTE*QDSSHRIKIKQ
Trigger: CTGTTTGATTTTGATTCTATGGGAGCTATCTTGCAACTCTGTAAGCTGTAGGTAACTGATAGCAGAGCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CCA 90 bp AATGATAATGGCTCACATTTACTTAGTTCTTATTATGTGCAGGGCTCAGCATTTGATCCAAGAAGACTGTaGAATTACTGCAAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: NDNGSHLLSSYYVQGSAFDPRRL*NYCKGF
Trigger: AAACCCCTTGCAGTAATTCCACAGTCTTCTTGGATC...AAATGCTGAGCCCTGCACATAATAAGAACTAAGTAAATGTGAGCCATTATCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
3UTR CAA 72 bp GATTTGCCAACACTAAACCAAATGTTCATCTGGGTCTaGGCTGCAATTTTAAGAACTTCATTAGAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: DLPTLNQMFIWV*AAILRTSLEGH
Trigger: ATGACCTTCTAATGAAGTTCTTAAAATTGCAGCCAAGACCCAGATGAACATTTGGTTTAGTGTTGGCAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR TCA 90 bp AATGATAATGGCTCACATTTACTTAGTTCTTATTATGTGCAGGGCTCAGCATTTTACAGCATCCTGAGATaGTACAAGTTAGAGATGAGA +
Preference number: 4 (lower is better)
Translates to: NDNGSHLLSSYYVQGSAFYSILR*YKLEMR
Trigger: TCTCATCTCTAACTTGTATCATCTCAGGATGCTGTA...AAATGCTGAGCCCTGCACATAATAAGAACTAAGTAAATGTGAGCCATTATCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR GCA 90 bp AATGATAATGGCTCACATTTACTTAGTTCTTATTATGTGCAGGGCTCAGCATTTTATTTCAAAGACTCTTaGTACCCATCGATAGGCAAA +
Preference number: 4 (lower is better)
Translates to: NDNGSHLLSSYYVQGSAFYFKDS*YPSIGK
Trigger: TTTGCCTATCGATGGGTAGCAAGAGTCTTTGAAATA...AAATGCTGAGCCCTGCACATAATAAGAACTAAGTAAATGTGAGCCATTATCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CAA 90 bp GTTCTGCAGGCTGTACAGGAAGCGTCACATAGGCATCTGCTTCTGGGGAGGCTTGGGATGTGCCTAACTTaGGTGGGCACCTTGCTCCAA +
Preference number: 5 (lower is better)
Translates to: VLQAVQEASHRHLLLGRLGMCLT*VGTLLQ
Trigger: TTGGAGCAAGGTGCCCACCAAAGTTAGGCACATCCC...AAGCCTCCCCAGAAGCAGATGCCTATGTGACGCTTCCTGTACAGCCTGCAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CAA 90 bp GCCCAGCTCCCAGTTACTTGTCATATGCAACCTCCATACACTGAGAGGGTGACAGTACCCAACAGCTCATaGAGAACGGGCCATGATGAC +
Preference number: 5 (lower is better)
Translates to: AQLPVTCHMQPPYTERVTVPNSS*RTGHDD
Trigger: GTCATCATGGCCCGTTCTCAATGAGCTGTTGGGTAC...TGTCACCCTCTCAGTGTATGGAGGTTGCATATGACAAGTAACTGGGAGCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CAA 90 bp CCAACCCTGGGTCACCTAGGATGGTGGTATGTTGGCTTCACCACAAATTGTGGGCTAGAAAGGTGTGGCTaGAAGTCTCTATGGGGACAG +
Preference number: 5 (lower is better)
Translates to: PTLGHLGWWYVGFTTNCGLERCG*KSLWGQ
Trigger: CTGTCCCCATAGAGACTTCAAGCCACACCTTTCTAG...CCCACAATTTGTGGTGAAGCCAACATACCACCATCCTAGGTGACCCAGGGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS GCA 90 bp TCCATTAATCACTCCCTTAATGGCCCTCCTCTACCCTCTTTCCCCTaGCTCACCGCATTGGCAACTACTGCCCTAAAGAACCAGAAACAG +
Preference number: 5 (lower is better)
Translates to: SINHSLNGPPLPSFP*LTALATTALKNQKQ
Trigger: CTGTTTCTGGTTCTTTAGGGCAGTAGTTGCCAATGCGGTGAGGCAGGGGAAAGAGGGTAGAGGAGGGCCATTAAGGGAGTGATTAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542369.5
CDS-3UTR CAA 90 bp CAGACAATGCATAGTTTTCCACTGAAGTACAATGGGATCTCCCCCTACACTTCCTGGCAGAACGTGACATaGACAGGACCCGGACAACCC +
Preference number: 5 (lower is better)
Translates to: QTMHSFPLKYNGISPYTSWQNVT*TGPGQP
Trigger: GGGTTGTCCGGGTCCTGTCAATGTCACGTTCTGCCA...GGAAGTGTAGGGGGAGATCCCATTGTACTTCAGTGGAAAACTATGCATTGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CAA 90 bp GCTCGCATTAGGGTACTAAAAGATTTCCCCCATCAAGATGGCCTTCATGCTCCCCATGCCCCACTGCAATaGCTCATGCTGTTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: ARIRVLKDFPHQDGLHAPHAPLQ*LMLFSS
Trigger: GGAAGAGAACAGCATGAGCAATTGCAGTGGGGCATG...GGGAGCATGAAGGCCATCTTGATGGGGGAAATCTTTTAGTACCCTAATGCGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CAA 90 bp GACATACATCTTCCCTCAGCCTCTTGCCAGTTTTACAACCCAGGACTGTCTTTCACTTTGGTGGGCACCTaGCTCCAAGCTGCAGGACTA +
Preference number: 5 (lower is better)
Translates to: DIHLPSASCQFYNPGLSFTLVGT*LQAAGL
Trigger: TAGTCCTGCAGCTTGGAGCAAGGTGCCCACCAAAGT...GAAAGACAGTCCTGGGTTGTAAAACTGGCAAGAGGCTGAGGGAAGATGTATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS TCA 90 bp TGCCAATCTAGAGCTTGCATGACAAAGGAGATGCCGGAACCTAGCTaGAAGAATGACCTGGGAACAGAGGATGCCTTTGGTCCATTCTGG +
Preference number: 5 (lower is better)
Translates to: CQSRACMTKEMPEPS*KNDLGTEDAFGPFW
Trigger: CCAGAATGGACCAAAGGCATCCTCTGTTCCCAGGTCATTCTTTCAGCTAGGTTCCGGCATCTCCTTTGTCATGCAAGCTCTAGATTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544679.1
CDS CCA 90 bp TTTAAGAAAATAACCACCTCGACCTGTGAGGCTACCTCTGCTTTTTaGTCCATCTCCTCTCAAGCCAACCCAGTCGGCTGCTGTAACTGC +
Preference number: 5 (lower is better)
Translates to: FKKITTSTCEATSAF*SISSQANPVGCCNC
Trigger: GCAGTTACAGCAGCCGACTGGGTTGGCTTGAGAGGAGATGGACCAAAAAGCAGAGGTAGCCTCACAGGTCGAGGTGGTTATTTTCTTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540688.1
CDS-3UTR CAA 90 bp GTTCTGCAGGCTGTACAGGAAGCGTCACATAGGCATCTGCTTCTGGGGAGGCTTGCTGAAGCATCTCCTTaGCATGTGAAGAGAATCTAT +
Preference number: 5 (lower is better)
Translates to: VLQAVQEASHRHLLLGRLAEASP*HVKRIY
Trigger: ATAGATTCTCTTCACATGCAAAGGAGATGCTTCAGC...AAGCCTCCCCAGAAGCAGATGCCTATGTGACGCTTCCTGTACAGCCTGCAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CAA 90 bp CTGGGTCACCTAGGATGGTGGTATGTTGGCTTCACCACAAATTGTGGGAGTTTTTCTTCCCTCAGCCTCTaGCCAGTTTTACAACCCAGG +
Preference number: 5 (lower is better)
Translates to: LGHLGWWYVGFTTNCGSFSSLSL*PVLQPR
Trigger: CCTGGGTTGTAAAACTGGCAAGAGGCTGAGGGAAGA...AAAACTCCCACAATTTGTGGTGAAGCCAACATACCACCATCCTAGGTGACCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CAA 90 bp GACATACATCTTCCCTCAGCCTCTTGCCAGTTTTACAACCCAGGACTGTCTTTCTGTCAGCAAAGACCCTaGCCTGGTAAGACTGCCCTT +
Preference number: 5 (lower is better)
Translates to: DIHLPSASCQFYNPGLSFCQQRP*PGKTAL
Trigger: AAGGGCAGTCTTACCAGGCAAGGGTCTTTGCTGACA...GAAAGACAGTCCTGGGTTGTAAAACTGGCAAGAGGCTGAGGGAAGATGTATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS GCA 90 bp ACCTCTGCTTTTTGGTCCATCTCCTCTCAAGCCAACCCAGTCGGCTaGTGTAACTGCTGGTACACTTTGTTCTCCTCCAAAGAAACAACA +
Preference number: 5 (lower is better)
Translates to: TSAFWSISSQANPVG*CNCWYTLFSSKETT
Trigger: TGTTGTTTCTTTGGAGGAGAACAAAGTGTACCAGCAGTTACAGCAGCCGACTGGGTTGGCTTGAGAGGAGATGGACCAAAAAGCAGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540688.1
CDS-3UTR CAA 90 bp GTTCTGCAGGCTGTACAGGAAGCGTCACATAGGCATCTGCTTCTGGGGAGGCTTCCTTACTTCATTCTCTaGGATTTTCCTTCACAGGAA +
Preference number: 5 (lower is better)
Translates to: VLQAVQEASHRHLLLGRLPYFIL*DFPSQE
Trigger: TTCCTGTGAAGGAAAATCCAAGAGAATGAAGTAAGG...AAGCCTCCCCAGAAGCAGATGCCTATGTGACGCTTCCTGTACAGCCTGCAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS TCA 90 bp TCCCTGTGCCTGTACCTAATAACCAGGACAGCTCCCCAATCACTGTaGCAATCAAAGAGTTCCATTAATCACTCCCTTAATGGCCCTCCT +
Preference number: 5 (lower is better)
Translates to: SLCLYLITRTAPQSL*QSKSSINHSLNGPP
Trigger: AGGAGGGCCATTAAGGGAGTGATTAATGGAACTCTTTGATTGTCACAGTGATTGGGGAGCTGTCCTGGTTATTAGGTACAGGCACAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542369.5
CDS-3UTR CAA 90 bp CCAACCCTGGGTCACCTAGGATGGTGGTATGTTGGCTTCACCACAAATTGTGGGTTTTCTATGGAGTTTTaGCTAATCCTTCCAGAGACC +
Preference number: 5 (lower is better)
Translates to: PTLGHLGWWYVGFTTNCGFSMEF*LILPET
Trigger: GGTCTCTGGAAGGATTAGCAAAAACTCCATAGAAAA...CCCACAATTTGTGGTGAAGCCAACATACCACCATCCTAGGTGACCCAGGGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CAA 90 bp CTGGGTCACCTAGGATGGTGGTATGTTGGCTTCACCACAAATTGTGGGAGTTTTGATGGGTTTACAGTCTaGCAGGCTCAAATCAACTGT +
Preference number: 5 (lower is better)
Translates to: LGHLGWWYVGFTTNCGSFDGFTV*QAQINC
Trigger: ACAGTTGATTTGAGCCTGCAAGACTGTAAACCCATC...AAAACTCCCACAATTTGTGGTGAAGCCAACATACCACCATCCTAGGTGACCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CAA 90 bp TCTGCTATCAGTTACCTACAGCTTACAGAGTTGCAAGATAGCTCCCATAGAATCACTCCTTTCTCCCACTaGCTGTGGGATGTGCCTAAC +
Preference number: 5 (lower is better)
Translates to: SAISYLQLTELQDSSHRITPFSH*LWDVPN
Trigger: GTTAGGCACATCCCACAGCAAGTGGGAGAAAGGAGT...GATTCTATGGGAGCTATCTTGCAACTCTGTAAGCTGTAGGTAACTGATAGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CAA 90 bp TTCTTCAAATACGCCCTCCATTCCACTATACCTCCCATTCACTCCAAGACCTTCCTGTACTGGTGGGATTaGCCAACACTAAACCAAATG +
Preference number: 5 (lower is better)
Translates to: FFKYALHSTIPPIHSKTFLYWWD*PTLNQM
Trigger: CATTTGGTTTAGTGTTGGCAAATCCCACCAGTACAG...GAAGGTCTTGGAGTGAATGGGAGGTATAGTGGAATGGAGGGCGTATTTGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CAA 90 bp GTCTTCTTGGATCCCAGCTGTGGGGCAGAGAGGAAATTTAACGCTTTAATTATTCAAGGTCTTGCCATATaGCCTAGGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: VFLDPSCGAERKFNALIIQGLAI*PRLVSN
Trigger: GTTTGAGACCAGCCTAGGCAATATGGCAAGACCTTG...AATAATTAAAGCGTTAAATTTCCTCTCTGCCCCACAGCTGGGATCCAAGAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CAA 90 bp AATGATAATGGCTCACATTTACTTAGTTCTTATTATGTGCAGGGCTCAGCATTTAGCCACAGGGTCTTCTaGGATCCCAGCTGTGGGGCA +
Preference number: 5 (lower is better)
Translates to: NDNGSHLLSSYYVQGSAFSHRVF*DPSCGA
Trigger: TGCCCCACAGCTGGGATCCAAGAAGACCCTGTGGCT...AAATGCTGAGCCCTGCACATAATAAGAACTAAGTAAATGTGAGCCATTATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS CCA 90 bp TCAGCACTCAACACTTCTGCAGCCTCCTCAATGCAAGTTTCAAAATaGGCCATCTGCTGTAGTCATAATATAGTGCCATTTCATCCAAGC +
Preference number: 5 (lower is better)
Translates to: SALNTSAASSMQVSK*AICCSHNIVPFHPS
Trigger: GCTTGGATGAAATGGCACTATATTATGACTACAGCAGATGGCCCATTTTGAAACTTGCATTGAGGAGGCTGCAGAAGTGTTGAGTGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535726.5
ENST00000544675.1
CDS-3UTR CAA 90 bp GTAAATGAGGAAGAAAACATGATAATGGGATGGGTTTACAGTCTTGCAGGCTCATGCCTTGGGATGCTGTaGATCTATGATCTTACCCCC +
Preference number: 5 (lower is better)
Translates to: VNEEENMIMGWVYSLAGSCLGML*IYDLTP
Trigger: GGGGGTAAGATCATAGATCAACAGCATCCCAAGGCA...TGAGCCTGCAAGACTGTAAACCCATCCCATTATCATGTTTTCTTCCTCATTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CAA 90 bp GCTCGCATTAGGGTACTAAAAGATTTCCCCCATCAAGATGGCCTTCATGCTCCCATGTTTACTCTTCCTTaGGATAAAGCCAATCAGCAA +
Preference number: 5 (lower is better)
Translates to: ARIRVLKDFPHQDGLHAPMFTLP*DKANQQ
Trigger: TTGCTGATTGGCTTTATCCAAAGGAAGAGTAAACAT...GGGAGCATGAAGGCCATCTTGATGGGGGAAATCTTTTAGTACCCTAATGCGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CAA 90 bp AAAAGAGGTTTAATTGGCTCATGGTTCTGCAGGCTGTACAGGAAGCGTCACATAAGATTGATGACCACATaGCTGTGTTGTACTACTCGT +
Preference number: 5 (lower is better)
Translates to: KRGLIGSWFCRLYRKRHIRLMTT*LCCTTR
Trigger: ACGAGTAGTACAACACAGCAATGTGGTCATCAATCT...TATGTGACGCTTCCTGTACAGCCTGCAGAACCATGAGCCAATTAAACCTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CAA 90 bp TTCTTCAAATACGCCCTCCATTCCACTATACCTCCCATTCACTCCAAGACCTTCGGTGCAAGATGTACTTaGTTAAACAGATGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: FFKYALHSTIPPIHSKTFGARCT*LNRCLK
Trigger: CTTCAAGCATCTGTTTAACAAAGTACATCTTGCACC...GAAGGTCTTGGAGTGAATGGGAGGTATAGTGGAATGGAGGGCGTATTTGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CAA 90 bp ATCATATACTATTACTTGTCAGCCCACACAATCCCACCTATGCTCTGGATTCTGCCAGAAAGATCCAGGTaGGAAAACCAATTCAGCTAC +
Preference number: 5 (lower is better)
Translates to: IIYYYLSAHTIPPMLWILPERSR*ENQFSY
Trigger: GTAGCTGAATTGGTTTTCCAACCTGGATCTTTCTGG...CAGAATCCAGAGCATAGGTGGGATTGTGTGGGCTGACAAGTAATAGTATATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CAA 90 bp GGCATTCCCTCATCAAACAGCGTTTTTACTGACATCCCTGTCCCAAATATAGATGATCCACATGGCTTCTaGTTCTCAGTACTTCTACAC +
Preference number: 5 (lower is better)
Translates to: GIPSSNSVFTDIPVPNIDDPHGF*FSVLLH
Trigger: GTGTAGAAGTACTGAGAACAAGAAGCCATGTGGATC...ATCTATATTTGGGACAGGGATGTCAGTAAAAACGCTGTTTGATGAGGGAATGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CAA 90 bp AAGCTGTGGGAAATACACAGGAGGGCCAAGGAAGAACATGAACGGAATTTAAAGTATTTGAGTTCCCCTTaGAGACATACATCTTCCCTC +
Preference number: 5 (lower is better)
Translates to: KLWEIHRRAKEEHERNLKYLSSP*RHTSSL
Trigger: GAGGGAAGATGTATGTCTCAAAGGGGAACTCAAATA...CTTTAAATTCCGTTCATGTTCTTCCTTGGCCCTCCTGTGTATTTCCCACAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS TCA 90 bp CAAGCTCCATTTATTACAACAGAAATGACATCTCAGACTCCCTGCTaGTTCCCTCACTCTTTCCGAGACAAACAGGTAACAGTACACTTT +
Preference number: 5 (lower is better)
Translates to: QAPFITTEMTSQTPC*FPHSFRDKQVTVHF
Trigger: AAAGTGTACTGTTACCTGTTTGTCTCGGAAAGAGTGAGGGAATCAGCAGGGAGTCTGAGATGTCATTTCTGTTGTAATAAATGGAGCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535726.5
ENST00000544675.1
CDS GCA 90 bp AACACTTCTGCAGCCTCCTCAATGCAAGTTTCAAAATGGGCCATCTaGTGTAGTCATAATATAGTGCCATTTCATCCAAGCTCCATTTAT +
Preference number: 5 (lower is better)
Translates to: NTSAASSMQVSKWAI*CSHNIVPFHPSSIY
Trigger: ATAAATGGAGCTTGGATGAAATGGCACTATATTATGACTACAGCAGATGGCCCATTTTGAAACTTGCATTGAGGAGGCTGCAGAAGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535726.5
ENST00000544675.1
CDS GCA 90 bp GTTACAAGGGCAGAGCTGAGTAATTATGACAAAGACTCTACGACCTaGAAAGCCAGAAGTATTTACTCTCTGTCCCTTCAAAGAAAAAGT +
Preference number: 5 (lower is better)
Translates to: VTRAELSNYDKDSTT*KARSIYSLSLQRKS
Trigger: ACTTTTTCTTTGAAGGGACAGAGAGTAAATACTTCTGGCTTTGCAGGTCGTAGAGTCTTTGTCATAATTACTCAGCTCTGCCCTTGTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544679.1
CDS-3UTR CAA 90 bp ATCATATACTATTACTTGTCAGCCCACACAATCCCACCTATGCTCTGGATTCTGATTACTGCAAGGGGTTaGAGAATCTATGGACAATGT +
Preference number: 5 (lower is better)
Translates to: IIYYYLSAHTIPPMLWILITARG*RIYGQC
Trigger: ACATTGTCCATAGATTCTCAAACCCCTTGCAGTAAT...CAGAATCCAGAGCATAGGTGGGATTGTGTGGGCTGACAAGTAATAGTATATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CAA 90 bp TCTGCTATCAGTTACCTACAGCTTACAGAGTTGCAAGATAGCTCCCATAGAATCAGAGAAATCACATTGTaGCTGTGTCTGTGTAGAAAG +
Preference number: 5 (lower is better)
Translates to: SAISYLQLTELQDSSHRIREITL*LCLCRK
Trigger: CTTTCTACACAGACACAGCAACAATGTGATTTCTCT...GATTCTATGGGAGCTATCTTGCAACTCTGTAAGCTGTAGGTAACTGATAGCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CAA 90 bp TCTGCTATCAGTTACCTACAGCTTACAGAGTTGCAAGATAGCTCCCATAGAATCGATAGAGAAATCACATaGTTGCTGTGTCTGTGTAGA +
Preference number: 5 (lower is better)
Translates to: SAISYLQLTELQDSSHRIDREIT*LLCLCR
Trigger: TCTACACAGACACAGCAACAATGTGATTTCTCTATC...GATTCTATGGGAGCTATCTTGCAACTCTGTAAGCTGTAGGTAACTGATAGCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS GCA 90 bp CCTGGGAACAGAGGATGCCTTTGGTCCATTCTGGGAAGAAATTACTaGTTTATTATACTGCCTATCACTCCTAAAAATGACCTTAGTAAT +
Preference number: 5 (lower is better)
Translates to: PGNRGCLWSILGRNY*FIILPITPKNDLSN
Trigger: ATTACTAAGGTCATTTTTAGGAGTGATAGGCAGTATAATAAAGCAGTAATTTCTTCCCAGAATGGACCAAAGGCATCCTCTGTTCCCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544679.1
CDS-3UTR CAA 90 bp AATGATAATGGCTCACATTTACTTAGTTCTTATTATGTGCAGGGCTCAGCATTTCCAGCTCCCAGTTACTaGTCATATGCAACCTCCATA +
Preference number: 5 (lower is better)
Translates to: NDNGSHLLSSYYVQGSAFPAPSY*SYATSI
Trigger: TATGGAGGTTGCATATGACAAGTAACTGGGAGCTGG...AAATGCTGAGCCCTGCACATAATAAGAACTAAGTAAATGTGAGCCATTATCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CAA 90 bp CCAGAAAGATCCAGGTTGGAAAACCAATTCAGCTACTTACTAATGGGGCAATTTATCATATACTATTACTaGTCAGCCCACACAATCCCA +
Preference number: 5 (lower is better)
Translates to: PERSRLENQFSYLLMGQFIIYYY*SAHTIP
Trigger: TGGGATTGTGTGGGCTGACAAGTAATAGTATATGAT...AAATTGCCCCATTAGTAAGTAGCTGAATTGGTTTTCCAACCTGGATCTTTCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS-3UTR CAA 90 bp AATGATAATGGCTCACATTTACTTAGTTCTTATTATGTGCAGGGCTCAGCATTTTACGACATATACTGGTaGTTTAACTGTCTTCCAGCC +
Preference number: 5 (lower is better)
Translates to: NDNGSHLLSSYYVQGSAFYDIYW*FNCLPA
Trigger: GGCTGGAAGACAGTTAAACAACCAGTATATGTCGTA...AAATGCTGAGCCCTGCACATAATAAGAACTAAGTAAATGTGAGCCATTATCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266544.10
CDS CCA 72 bp ATAACCACCTCGACCTGTGAGGCTACCTCTGCTTTTTaGTCCATCTCCTCTCAAGCCAACCCAGTCGGCTGC +
Preference number: 6 (lower is better)
Translates to: ITTSTCEATSAF*SISSQANPVGC
Trigger: GCAGCCGACTGGGTTGGCTTGAGAGGAGATGGACCAAAAAGCAGAGGTAGCCTCACAGGTCGAGGTGGTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540688.1
CDS CCA 72 bp CAAAGGAGATGCCGGAACCTAGCTGAAAGAATGACCTaGGAACAGAGGATGCCTTTGGTCCATTCTGGGAAG +
Preference number: 6 (lower is better)
Translates to: QRRCRNLAERMT*EQRMPLVHSGK
Trigger: CTTCCCAGAATGGACCAAAGGCATCCTCTGTTCCCAGGTCATTCTTTCAGCTAGGTTCCGGCATCTCCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544679.1
CDS TCA 72 bp AGAGCTTGCATGACAAAGGAGATGCCGGAACCTAGCTaGAAGAATGACCTGGGAACAGAGGATGCCTTTGGT +
Preference number: 6 (lower is better)
Translates to: RACMTKEMPEPS*KNDLGTEDAFG
Trigger: ACCAAAGGCATCCTCTGTTCCCAGGTCATTCTTTCAGCTAGGTTCCGGCATCTCCTTTGTCATGCAAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544679.1
CDS GCA 72 bp TTTTGGTCCATCTCCTCTCAAGCCAACCCAGTCGGCTaGTGTAACTGCTGGTACACTTTGTTCTCCTCCAAA +
Preference number: 6 (lower is better)
Translates to: FWSISSQANPVG*CNCWYTLFSSK
Trigger: TTTGGAGGAGAACAAAGTGTACCAGCAGTTACAGCAGCCGACTGGGTTGGCTTGAGAGGAGATGGACCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540688.1
CDS CCA 72 bp CTTGGCTGCAGGCATTTGGGGCAGCACAACTCTTTGTaGAAAGAGACTGTCCTGTGCTCCGTAGGATATTTA +
Preference number: 6 (lower is better)
Translates to: LGCRHLGQHNSL*KETVLCSVGYL
Trigger: TAAATATCCTACGGAGCACAGGACAGTCTCTTTCCACAAAGAGTTGTGCTGCCCCAAATGCCTGCAGCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542369.5
CDS GCA 72 bp ATCTCCTCTCAAGCCAACCCAGTCGGCTGCTGTAACTaGTGGTACACTTTGTTCTCCTCCAAAGAAACAACA +
Preference number: 6 (lower is better)
Translates to: ISSQANPVGCCN*WYTLFSSKETT
Trigger: TGTTGTTTCTTTGGAGGAGAACAAAGTGTACCAGCAGTTACAGCAGCCGACTGGGTTGGCTTGAGAGGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540688.1
CDS GCA 72 bp GCAGCCTCCTCAATGCAAGTTTCAAAATGGGCCATCTaGTGTAGTCATAATATAGTGCCATTTCATCCAAGC +
Preference number: 6 (lower is better)
Translates to: AASSMQVSKWAI*CSHNIVPFHPS
Trigger: GCTTGGATGAAATGGCACTATATTATGACTACAGCAGATGGCCCATTTTGAAACTTGCATTGAGGAGGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535726.5
ENST00000544675.1
CDS TCA 72 bp ATTGTCTATGGCTACTTCCAGTTACAAGGGCAGAGCTaGGTAATTATGACAAAGACTCTACGACCTGCAAAG +
Preference number: 6 (lower is better)
Translates to: IVYGYFQLQGQS*VIMTKTLRPAK
Trigger: CTTTGCAGGTCGTAGAGTCTTTGTCATAATTACTCAGCTCTGCCCTTGTAACTGGAAGTAGCCATAGACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544679.1
CDS CAA 72 bp GAAGCAAGGATCATTAGGGAGATAGACTTTCCCTTCTaGACAGCAACCACTTACAGACTGAAGATAGGAAGA +
Preference number: 6 (lower is better)
Translates to: EARIIREIDFPF*TATTYRLKIGR
Trigger: TCTTCCTATCTTCAGTCTGTAAGTGGTTGCTGTCAAGAAGGGAAAGTCTATCTCCCTAATGATCCTTGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535726.5
CDS CAA 72 bp TTTACTGAAATGCAGCCATGCCCATTTGTGTACATATaGTCTATGGCTACTTCCAGTTACAAGGGCAGAGCT +
Preference number: 6 (lower is better)
Translates to: FTEMQPCPFVYI*SMATSSYKGRA
Trigger: AGCTCTGCCCTTGTAACTGGAAGTAGCCATAGACAATATGTACACAAATGGGCATGGCTGCATTTCAGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544679.1
CDS CAA 90 bp TCCTCTCAAGCCAACCCAGTCGGCTGCTGTAACTGCTGGTACACTTaGTTCTCCTCCAAAGAAACAACAGATCTTAAACTTAAAATGAAA +
Preference number: 6 (lower is better)
Translates to: SSQANPVGCCNCWYT*FSSKETTDLKLKMK
Trigger: TTTCATTTTAAGTTTAAGATCTGTTGTTTCTTTGGAGGAGAACAAAGTGTACCAGCAGTTACAGCAGCCGACTGGGTTGGCTTGAGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540688.1
CDS TCA 72 bp CTGTACCTAATAACCAGGACAGCTCCCCAATCACTGTaGCAATCAAAGAGTTCCATTAATCACTCCCTTAAT +
Preference number: 6 (lower is better)
Translates to: LYLITRTAPQSL*QSKSSINHSLN
Trigger: ATTAAGGGAGTGATTAATGGAACTCTTTGATTGTCACAGTGATTGGGGAGCTGTCCTGGTTATTAGGTACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542369.5
CDS CAA 90 bp ACAGACAAAGAAGCAAGGATCATTAGGGAGATAGACTTTCCCTTCTaGACAGCAACCACTTACAGACTGAAGATAGGAAGAGTGTCTTTT +
Preference number: 6 (lower is better)
Translates to: TDKEARIIREIDFPF*TATTYRLKIGRVSF
Trigger: AAAAGACACTCTTCCTATCTTCAGTCTGTAAGTGGTTGCTGTCAAGAAGGGAAAGTCTATCTCCCTAATGATCCTTGCTTCTTTGTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535726.5
CDS GCA 72 bp AGAGGATGCCTTTGGTCCATTCTGGGAAGAAATTACTaGTTTATTATACTGCCTATCACTCCTAAAAATGAC +
Preference number: 6 (lower is better)
Translates to: RGCLWSILGRNY*FIILPITPKND
Trigger: GTCATTTTTAGGAGTGATAGGCAGTATAATAAAGCAGTAATTTCTTCCCAGAATGGACCAAAGGCATCCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544679.1
CDS CAA 90 bp TTTAACAGCAAGAGACTTGTCAAACATTCCACCATTTCTTTTTCATaGACTGAGGTTCTTGGTACTAGAATGAACCCTCAAAGTTCATGT +
Preference number: 6 (lower is better)
Translates to: FNSKRLVKHSTISFS*TEVLGTRMNPQSSC
Trigger: ACATGAACTTTGAGGGTTCATTCTAGTACCAAGAACCTCAGTCAATGAAAAAGAAATGGTGGAATGTTTGACAAGTCTCTTGCTGTTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535050.1