Pregenerated sensors for NDUFA8 (Homo sapiens)
Ensembl gene IDs: ENSG00000119421Ensembl transcript IDs: ENST00000373768.4
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TTAATGTTTGTGATCCCGGAAAGAACACACTATCAGTCGATGCAAACCGCATGGCGTTGTCTGAGCACATaGCCGAGTGTGGGCCACGGA | + |
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Preference number: 2 (lower is better) Translates to: LMFVIPERTHYQSMQTAWRCLST*PSVGHG Trigger: TCCGTGGCCCACACTCGGTCATGTGCTCAGACAACG...CCATGCGGTTTGCATCGACTGATAGTGTGTTCTTTCCGGGATCACAAACATTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| 3UTR TCA 72 bp | ATGCAAACCGCATGGGCGTTTTCATCAGTCGTTGTCTaGGCACATGACCGAGTGTGGGCCACGGACCCATCT | + |
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Preference number: 3 (lower is better) Translates to: MQTAWAFSSVVV*AHDRVWATDPS Trigger: AGATGGGTCCGTGGCCCACACTCGGTCATGTGCTCAGACAACGACTGATGAAAACGCCCATGCGGTTTGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS-3UTR TCA 90 bp | CCCGGAAAGAACACACTATCAGTCGATGCAAACCGCATGGGCGTTTTCATCAGTCCACTATCCCCGGCATaGCGGCTGCAGCCCCGACCC | + |
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Preference number: 4 (lower is better) Translates to: PGKNTLSVDANRMGVFISPLSPA*RLQPRP Trigger: GGGTCGGGGCTGCAGCCGTCATGCCGGGGATAGTGG...ACTGATGAAAACGCCCATGCGGTTTGCATCGACTGATAGTGTGTTCTTTCCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS-3UTR TCA 90 bp | GTGATCCCGGAAAGAACACACTATCAGTCGATGCAAACCGCATGGGCGTTTTCATCGCCCCCGTCTCCTTaGACTCCCCTTTCGACCGCC | + |
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Preference number: 4 (lower is better) Translates to: VIPERTHYQSMQTAWAFSSPPSP*TPLSTA Trigger: GGCGGTCGAAAGGGGAGTTCAAGGAGACGGGGGCGA...TGAAAACGCCCATGCGGTTTGCATCGACTGATAGTGTGTTCTTTCCGGGATCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS-3UTR GCA 90 bp | GTTTGTGATCCCGGAAAGAACACACTATCAGTCGATGCAAACCGCATGGGCGTTCTTTCGACCGCCGAGTaGCACACGGCGCCTGCGCAT | + |
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Preference number: 4 (lower is better) Translates to: VCDPGKNTLSVDANRMGVLSTAE*HTAPAH Trigger: ATGCGCAGGCGCCGTGTGGCACTCGGCGGTCGAAAG...AACGCCCATGCGGTTTGCATCGACTGATAGTGTGTTCTTTCCGGGATCACAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS-3UTR CCA 90 bp | CGATGCAAACCGCATGGGCGTTTTCATCAGTCGTTGTCTGAGCACATGACCGAGTCAGCTCCTCTAGAGTaGGCAGCTCCACTATCCCCG | + |
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Preference number: 4 (lower is better) Translates to: RCKPHGRFHQSLSEHMTESAPLE*AAPLSP Trigger: CGGGGATAGTGGAGCTGCCCACTCTAGAGGAGCTGA...CTCGGTCATGTGCTCAGACAACGACTGATGAAAACGCCCATGCGGTTTGCATCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS-3UTR GCA 90 bp | CATGGGCGTTTTCATCAGTCGTTGTCTGAGCACATGACCGAGTGTGGGCCACGGAGAAATAAAAGCGGCTaGCATGTGTGGCAGGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: HGRFHQSLSEHMTECGPRRNKSG*HVWQAA Trigger: TGCAGCCTGCCACACATGGCAGCCGCTTTTATTTCT...CCGTGGCCCACACTCGGTCATGTGCTCAGACAACGACTGATGAAAACGCCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS-3UTR CCA 90 bp | GGAAAGAACACACTATCAGTCGATGCAAACCGCATGGGCGTTTTCATCAGTCGTAGCGGCTGCCATGTGTaGCAGGCTGCAGATCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: GKNTLSVDANRMGVFISRSGCHV*QAADLP Trigger: AGGGAGATCTGCAGCCTGCCACACATGGCAGCCGCT...ACGACTGATGAAAACGCCCATGCGGTTTGCATCGACTGATAGTGTGTTCTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS-3UTR TCA 90 bp | AAGAACACACTATCAGTCGATGCAAACCGCATGGGCGTTTTCATCAGTCGTTGTCGTTGTCTGAGCACATaGCCGAGTGTGGGCCACGGA | + |
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Preference number: 4 (lower is better) Translates to: KNTLSVDANRMGVFISRCRCLST*PSVGHG Trigger: TCCGTGGCCCACACTCGGTCATGTGCTCAGACAACG...ACAACGACTGATGAAAACGCCCATGCGGTTTGCATCGACTGATAGTGTGTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS-3UTR CCA 90 bp | GTGATCCCGGAAAGAACACACTATCAGTCGATGCAAACCGCATGGGCGTTTTCAGCACATGACCGAGTGTaGGCCACGGACCCATCTTTA | + |
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Preference number: 4 (lower is better) Translates to: VIPERTHYQSMQTAWAFSAHDRV*ATDPSL Trigger: TAAAGATGGGTCCGTGGCCCACACTCGGTCATGTGC...TGAAAACGCCCATGCGGTTTGCATCGACTGATAGTGTGTTCTTTCCGGGATCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS-3UTR TCA 90 bp | CCCGGAAAGAACACACTATCAGTCGATGCAAACCGCATGGGCGTTTTCATCAGTTCATCAGTCGTTGTCTaGGCACATGACCGAGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: PGKNTLSVDANRMGVFISSSVVV*AHDRVW Trigger: CCACACTCGGTCATGTGCTCAGACAACGACTGATGA...ACTGATGAAAACGCCCATGCGGTTTGCATCGACTGATAGTGTGTTCTTTCCGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS-3UTR GCA 90 bp | AACACACTATCAGTCGATGCAAACCGCATGGGCGTTTTCATCAGTCGTTGTCTGCCATGTGTGGCAGGCTaGAGATCTCCCTCGATCTCA | + |
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Preference number: 4 (lower is better) Translates to: NTLSVDANRMGVFISRCLPCVAG*RSPSIS Trigger: TGAGATCGAGGGAGATCTGCAGCCTGCCACACATGG...CAGACAACGACTGATGAAAACGCCCATGCGGTTTGCATCGACTGATAGTGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS-3UTR CCA 90 bp | AAGAACACACTATCAGTCGATGCAAACCGCATGGGCGTTTTCATCAGTCGTTGTCCTCGATCTCAGGGCTaGGATCCGGTCTTGGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: KNTLSVDANRMGVFISRCPRSQG*DPVLVL Trigger: CAAGACCAAGACCGGATCCCAGCCCTGAGATCGAGG...ACAACGACTGATGAAAACGCCCATGCGGTTTGCATCGACTGATAGTGTGTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS-3UTR TCA 90 bp | TGCAAACCGCATGGGCGTTTTCATCAGTCGTTGTCTGAGCACATGACCGAGTGTCCAAAGCACACTTGTTaGCCAGTTTGCCTTCCTCTA | + |
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Preference number: 4 (lower is better) Translates to: CKPHGRFHQSLSEHMTECPKHTC*PVCLPL Trigger: TAGAGGAAGGCAAACTGGTCAACAAGTGTGCTTTGG...ACACTCGGTCATGTGCTCAGACAACGACTGATGAAAACGCCCATGCGGTTTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS-3UTR TCA 90 bp | GTGATCCCGGAAAGAACACACTATCAGTCGATGCAAACCGCATGGGCGTTTTCATGCTGTTTGCGACAGTaGCGAAATAACTGCTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: VIPERTHYQSMQTAWAFSCCLRQ*RNNCWP Trigger: TGGCCAGCAGTTATTTCGTCACTGTCGCAAACAGCA...TGAAAACGCCCATGCGGTTTGCATCGACTGATAGTGTGTTCTTTCCGGGATCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS-3UTR TCA 90 bp | GAAAGAACACACTATCAGTCGATGCAAACCGCATGGGCGTTTTCATCAGTCGTTATCCGGTCTTGGTCTTaGGTGATAGGGATTCTCCGG | + |
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Preference number: 4 (lower is better) Translates to: ERTHYQSMQTAWAFSSVVIRSWS*VIGILR Trigger: CCGGAGAATCCCTATCACTCAAGACCAAGACCGGAT...AACGACTGATGAAAACGCCCATGCGGTTTGCATCGACTGATAGTGTGTTCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS-3UTR GCA 90 bp | GTGATCCCGGAAAGAACACACTATCAGTCGATGCAAACCGCATGGGCGTTTTCAACACTCGTCAAACTTTaGCTGCTGTTTGCGACAGTG | + |
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Preference number: 4 (lower is better) Translates to: VIPERTHYQSMQTAWAFSTLVKL*LLFATV Trigger: CACTGTCGCAAACAGCAGGCAAAGTTTGACGAGTGT...TGAAAACGCCCATGCGGTTTGCATCGACTGATAGTGTGTTCTTTCCGGGATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS-3UTR GCA 90 bp | GTTTGTGATCCCGGAAAGAACACACTATCAGTCGATGCAAACCGCATGGGCGTTCACACTATCAGTCGATaGAAACCGCATGGGCGTTTT | + |
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Preference number: 4 (lower is better) Translates to: VCDPGKNTLSVDANRMGVHTISR*KPHGRF Trigger: AAAACGCCCATGCGGTTTGCATCGACTGATAGTGTG...AACGCCCATGCGGTTTGCATCGACTGATAGTGTGTTCTTTCCGGGATCACAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS-3UTR TCA 90 bp | GTTTGTGATCCCGGAAAGAACACACTATCAGTCGATGCAAACCGCATGGGCGTTAAAGGCTCTGCACAGTaGCGTTTTATCTGCCTAAAG | + |
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Preference number: 4 (lower is better) Translates to: VCDPGKNTLSVDANRMGVKGSAQ*RFICLK Trigger: CTTTAGGCAGATAAAACGTCACTGTGCAGAGCCTTT...AACGCCCATGCGGTTTGCATCGACTGATAGTGTGTTCTTTCCGGGATCACAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS-3UTR TCA 90 bp | CCCGGAAAGAACACACTATCAGTCGATGCAAACCGCATGGGCGTTTTCATCAGTCTGTTTTCACTTTGGTaGCCTTTGACAGTTCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: PGKNTLSVDANRMGVFISLFSLW*PLTVLP Trigger: TGGGAGAACTGTCAAAGGTCACCAAAGTGAAAACAG...ACTGATGAAAACGCCCATGCGGTTTGCATCGACTGATAGTGTGTTCTTTCCGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS-3UTR CCA 90 bp | AACACACTATCAGTCGATGCAAACCGCATGGGCGTTTTCATCAGTCGTTGTCTGTCGATGCAAACCGCATaGGCGTTTTCATCAGTCGTT | + |
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Preference number: 4 (lower is better) Translates to: NTLSVDANRMGVFISRCLSMQTA*AFSSVV Trigger: AACGACTGATGAAAACGCCCATGCGGTTTGCATCGA...CAGACAACGACTGATGAAAACGCCCATGCGGTTTGCATCGACTGATAGTGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS-3UTR GCA 90 bp | AGTCGATGCAAACCGCATGGGCGTTTTCATCAGTCGTTGTCTGAGCACATGACCTTCTGTAAAAGGCTCTaGACAGTGACGTTTTATCTG | + |
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Preference number: 4 (lower is better) Translates to: SRCKPHGRFHQSLSEHMTFCKRL*TVTFYL Trigger: CAGATAAAACGTCACTGTGCAGAGCCTTTTACAGAA...GGTCATGTGCTCAGACAACGACTGATGAAAACGCCCATGCGGTTTGCATCGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS-3UTR GCA 90 bp | GGAAAGAACACACTATCAGTCGATGCAAACCGCATGGGCGTTTTCATCAGTCGTACTTTGCCTGCTGTTTaGGACAGTGACGAAATAACT | + |
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Preference number: 4 (lower is better) Translates to: GKNTLSVDANRMGVFISRTLPAV*DSDEIT Trigger: AGTTATTTCGTCACTGTCGCAAACAGCAGGCAAAGT...ACGACTGATGAAAACGCCCATGCGGTTTGCATCGACTGATAGTGTGTTCTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS-3UTR CCA 90 bp | GTTAATGTTTGTGATCCCGGAAAGAACACACTATCAGTCGATGCAAACCGCATGGGACCCATCTTTACTTaGTCCAGAAATAAAAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: VNVCDPGKNTLSVDANRMGPIFT*SRNKSG Trigger: GCCGCTTTTATTTCTGGACCAAGTAAAGATGGGTCC...CATGCGGTTTGCATCGACTGATAGTGTGTTCTTTCCGGGATCACAAACATTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS-3UTR CCA 90 bp | CCCGGAAAGAACACACTATCAGTCGATGCAAACCGCATGGGCGTTTTCATCAGTTTAATGGACAGGAAATaGTATAGAATAACTGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: PGKNTLSVDANRMGVFISLMDRK*YRITAK Trigger: CTTGGCAGTTATTCTATACCATTTCCTGTCCATTAA...ACTGATGAAAACGCCCATGCGGTTTGCATCGACTGATAGTGTGTTCTTTCCGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS GCA 90 bp | GTGGGCCACGGACCCATCTTTACTTGGTCCAGAAATAAAAGCGGCTaGCATGTGTGGCAGGCTGCAGATCTCCCTCGATCTCAGGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: VGHGPIFTWSRNKSG*HVWQAADLPRSQGW Trigger: CCAGCCCTGAGATCGAGGGAGATCTGCAGCCTGCCACACATGGCAGCCGCTTTTATTTCTGGACCAAGTAAAGATGGGTCCGTGGCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS CCA 90 bp | GGCTGCCATGTGTGGCAGGCTGCAGATCTCCCTCGATCTCAGGGCTaGGATCCGGTCTTGGTCTTGAGTGATAGGGATTCTCCGGTAAAG | + |
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Preference number: 5 (lower is better) Translates to: GCHVWQAADLPRSQG*DPVLVLSDRDSPVK Trigger: CTTTACCGGAGAATCCCTATCACTCAAGACCAAGACCGGATCCCAGCCCTGAGATCGAGGGAGATCTGCAGCCTGCCACACATGGCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS CCA 90 bp | GGACCCATCTTTACTTGGTCCAGAAATAAAAGCGGCTGCCATGTGTaGCAGGCTGCAGATCTCCCTCGATCTCAGGGCTGGGATCCGGTC | + |
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Preference number: 5 (lower is better) Translates to: GPIFTWSRNKSGCHV*QAADLPRSQGWDPV Trigger: GACCGGATCCCAGCCCTGAGATCGAGGGAGATCTGCAGCCTGCCACACATGGCAGCCGCTTTTATTTCTGGACCAAGTAAAGATGGGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS-3UTR CAA 90 bp | CATGGGCGTTTTCATCAGTCGTTGTCTGAGCACATGACCGAGTGTGGGCCACGGGATCCGGTCTTGGTCTaGAGTGATAGGGATTCTCCG | + |
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Preference number: 5 (lower is better) Translates to: HGRFHQSLSEHMTECGPRDPVLV*SDRDSP Trigger: CGGAGAATCCCTATCACTCAAGACCAAGACCGGATC...CCGTGGCCCACACTCGGTCATGTGCTCAGACAACGACTGATGAAAACGCCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS-3UTR CAA 90 bp | TTAATGTTTGTGATCCCGGAAAGAACACACTATCAGTCGATGCAAACCGCATGGGTCGCCCCCGTCTCCTaGAACTCCCCTTTCGACCGC | + |
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Preference number: 5 (lower is better) Translates to: LMFVIPERTHYQSMQTAWVAPVS*NSPFDR Trigger: GCGGTCGAAAGGGGAGTTCAAGGAGACGGGGGCGAC...CCATGCGGTTTGCATCGACTGATAGTGTGTTCTTTCCGGGATCACAAACATTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS-3UTR CAA 90 bp | GGAAAGAACACACTATCAGTCGATGCAAACCGCATGGGCGTTTTCATCAGTCGTCGCACCCAGCCCAGTTaGTCCAGCACACACTCGTCA | + |
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Preference number: 5 (lower is better) Translates to: GKNTLSVDANRMGVFISRRTQPS*SSTHSS Trigger: TGACGAGTGTGTGCTGGACAAACTGGGCTGGGTGCG...ACGACTGATGAAAACGCCCATGCGGTTTGCATCGACTGATAGTGTGTTCTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS TCA 90 bp | TATCAGTCGATGCAAACCGCATGGGCGTTTTCATCAGTCGTTGTCTaGGCACATGACCGAGTGTGGGCCACGGACCCATCTTTACTTGGT | + |
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Preference number: 5 (lower is better) Translates to: YQSMQTAWAFSSVVV*AHDRVWATDPSLLG Trigger: ACCAAGTAAAGATGGGTCCGTGGCCCACACTCGGTCATGTGCTCAGACAACGACTGATGAAAACGCCCATGCGGTTTGCATCGACTGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS-3UTR CAA 90 bp | AAACCGCATGGGCGTTTTCATCAGTCGTTGTCTGAGCACATGACCGAGTGTGGGGTTGGGCTTATCACATaGAGCTCCATAGTGATGGGC | + |
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Preference number: 5 (lower is better) Translates to: KPHGRFHQSLSEHMTECGVGLIT*SSIVMG Trigger: GCCCATCACTATGGAGCTCAATGTGATAAGCCCAAC...CCCACACTCGGTCATGTGCTCAGACAACGACTGATGAAAACGCCCATGCGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS-3UTR CAA 90 bp | TCCCGGAAAGAACACACTATCAGTCGATGCAAACCGCATGGGCGTTTTCATCAGGGCTGGGATCCGGTCTaGGTCTTGAGTGATAGGGAT | + |
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Preference number: 5 (lower is better) Translates to: SRKEHTISRCKPHGRFHQGWDPV*VLSDRD Trigger: ATCCCTATCACTCAAGACCAAGACCGGATCCCAGCC...CTGATGAAAACGCCCATGCGGTTTGCATCGACTGATAGTGTGTTCTTTCCGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS-3UTR CAA 90 bp | CCCGGAAAGAACACACTATCAGTCGATGCAAACCGCATGGGCGTTTTCATCAGTCGTTTTCATCAGTCGTaGTCTGAGCACATGACCGAG | + |
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Preference number: 5 (lower is better) Translates to: PGKNTLSVDANRMGVFISRFHQS*SEHMTE Trigger: CTCGGTCATGTGCTCAGACAACGACTGATGAAAACG...ACTGATGAAAACGCCCATGCGGTTTGCATCGACTGATAGTGTGTTCTTTCCGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS-3UTR CAA 90 bp | AAACCGCATGGGCGTTTTCATCAGTCGTTGTCTGAGCACATGACCGAGTGTGGGCGATCTGTTTTCACTTaGGTGACCTTTGACAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: KPHGRFHQSLSEHMTECGRSVFT*VTFDSS Trigger: AGAACTGTCAAAGGTCACCAAAGTGAAAACAGATCG...CCCACACTCGGTCATGTGCTCAGACAACGACTGATGAAAACGCCCATGCGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS GCA 90 bp | AGCCCAGTTTGTCCAGCACACACTCGTCAAACTTTGCCTGCTGTTTaGGACAGTGACGAAATAACTGCTGGCCAGTATAATCAATGCAAG | + |
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Preference number: 5 (lower is better) Translates to: SPVCPAHTRQTLPAV*DSDEITAGQYNQCK Trigger: CTTGCATTGATTATACTGGCCAGCAGTTATTTCGTCACTGTCGCAAACAGCAGGCAAAGTTTGACGAGTGTGTGCTGGACAAACTGGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS-3UTR CAA 90 bp | AAGAACACACTATCAGTCGATGCAAACCGCATGGGCGTTTTCATCAGTCGTTGTCACACTCGTCAAACTTaGCCTGCTGTTTGCGACAGT | + |
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Preference number: 5 (lower is better) Translates to: KNTLSVDANRMGVFISRCHTRQT*PAVCDS Trigger: ACTGTCGCAAACAGCAGGCAAAGTTTGACGAGTGTG...ACAACGACTGATGAAAACGCCCATGCGGTTTGCATCGACTGATAGTGTGTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS-3UTR CAA 90 bp | GAAAGAACACACTATCAGTCGATGCAAACCGCATGGGCGTTTTCATCAGTCGTTAAGTCCAAAGCACACTaGTTGACCAGTTTGCCTTCC | + |
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Preference number: 5 (lower is better) Translates to: ERTHYQSMQTAWAFSSVVKSKAH*LTSLPS Trigger: GGAAGGCAAACTGGTCAACAAGTGTGCTTTGGACTT...AACGACTGATGAAAACGCCCATGCGGTTTGCATCGACTGATAGTGTGTTCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS-3UTR CAA 90 bp | GTTAATGTTTGTGATCCCGGAAAGAACACACTATCAGTCGATGCAAACCGCATGTCCAAAGCACACTTGTaGACCAGTTTGCCTTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: VNVCDPGKNTLSVDANRMSKAHL*TSLPSS Trigger: AGAGGAAGGCAAACTGGTCAACAAGTGTGCTTTGGA...CATGCGGTTTGCATCGACTGATAGTGTGTTCTTTCCGGGATCACAAACATTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS GCA 90 bp | CTGGCCAGTATAATCAATGCAAGTCCAATATTCTGTAAAAGGCTCTaGACAGTGACGTTTTATCTGCCTAAAGAAGTCCAAAGCACACTT | + |
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Preference number: 5 (lower is better) Translates to: LASIINASPIFCKRL*TVTFYLPKEVQSTL Trigger: AAGTGTGCTTTGGACTTCTTTAGGCAGATAAAACGTCACTGTGCAGAGCCTTTTACAGAATATTGGACTTGCATTGATTATACTGGCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS TCA 72 bp | GACGAGAAGCCCTCAGCCGCGTCGCCCCCGTCTCCTTaGACTCCCCTTTCGACCGCCGAGTGCCACACGGCG | + |
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Preference number: 6 (lower is better) Translates to: DEKPSAASPPSP*TPLSTAECHTA Trigger: CGCCGTGTGGCACTCGGCGGTCGAAAGGGGAGTTCAAGGAGACGGGGGCGACGCGGCTGAGGGCTTCTCGTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS CAA 72 bp | CGACGAGAAGCCCTCAGCCGCGTCGCCCCCGTCTCCTaGAACTCCCCTTTCGACCGCCGAGTGCCACACGGC | + |
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Preference number: 6 (lower is better) Translates to: RREALSRVAPVS*NSPFDRRVPHG Trigger: GCCGTGTGGCACTCGGCGGTCGAAAGGGGAGTTCAAGGAGACGGGGGCGACGCGGCTGAGGGCTTCTCGTCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS CAA 90 bp | GTGACCTTTGACAGTTCTCCCAGGTCAGGCCGCACCCAGCCCAGTTaGTCCAGCACACACTCGTCAAACTTTGCCTGCTGTTTGCGACAG | + |
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Preference number: 6 (lower is better) Translates to: VTFDSSPRSGRTQPS*SSTHSSNFACCLRQ Trigger: CTGTCGCAAACAGCAGGCAAAGTTTGACGAGTGTGTGCTGGACAAACTGGGCTGGGTGCGGCCTGACCTGGGAGAACTGTCAAAGGTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS CCA 72 bp | GTGTGGCAGGCTGCAGATCTCCCTCGATCTCAGGGCTaGGATCCGGTCTTGGTCTTGAGTGATAGGGATTCT | + |
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Preference number: 6 (lower is better) Translates to: VWQAADLPRSQG*DPVLVLSDRDS Trigger: AGAATCCCTATCACTCAAGACCAAGACCGGATCCCAGCCCTGAGATCGAGGGAGATCTGCAGCCTGCCACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS CAA 72 bp | CTCCCTCGATCTCAGGGCTGGGATCCGGTCTTGGTCTaGAGTGATAGGGATTCTCCGGTAAAGGTCGATCTG | + |
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Preference number: 6 (lower is better) Translates to: LPRSQGWDPVLV*SDRDSPVKVDL Trigger: CAGATCGACCTTTACCGGAGAATCCCTATCACTCAAGACCAAGACCGGATCCCAGCCCTGAGATCGAGGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS CAA 72 bp | GCAGATCTCCCTCGATCTCAGGGCTGGGATCCGGTCTaGGTCTTGAGTGATAGGGATTCTCCGGTAAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: ADLPRSQGWDPV*VLSDRDSPVKV Trigger: GACCTTTACCGGAGAATCCCTATCACTCAAGACCAAGACCGGATCCCAGCCCTGAGATCGAGGGAGATCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS CAA 90 bp | CAGGCCGCACCCAGCCCAGTTTGTCCAGCACACACTCGTCAAACTTaGCCTGCTGTTTGCGACAGTGACGAAATAACTGCTGGCCAGTAT | + |
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Preference number: 6 (lower is better) Translates to: QAAPSPVCPAHTRQT*PAVCDSDEITAGQY Trigger: ATACTGGCCAGCAGTTATTTCGTCACTGTCGCAAACAGCAGGCAAAGTTTGACGAGTGTGTGCTGGACAAACTGGGCTGGGTGCGGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS CAA 90 bp | TGGCAGGCTGCAGATCTCCCTCGATCTCAGGGCTGGGATCCGGTCTaGGTCTTGAGTGATAGGGATTCTCCGGTAAAGGTCGATCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: WQAADLPRSQGWDPV*VLSDRDSPVKVDLF Trigger: AAACAGATCGACCTTTACCGGAGAATCCCTATCACTCAAGACCAAGACCGGATCCCAGCCCTGAGATCGAGGGAGATCTGCAGCCTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS CCA 72 bp | TTTACTTGGTCCAGAAATAAAAGCGGCTGCCATGTGTaGCAGGCTGCAGATCTCCCTCGATCTCAGGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: FTWSRNKSGCHV*QAADLPRSQGW Trigger: CCAGCCCTGAGATCGAGGGAGATCTGCAGCCTGCCACACATGGCAGCCGCTTTTATTTCTGGACCAAGTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS CAA 90 bp | CACACTATCAGTCGATGCAAACCGCATGGGCGTTTTCATCAGTCGTaGTCTGAGCACATGACCGAGTGTGGGCCACGGACCCATCTTTAC | + |
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Preference number: 6 (lower is better) Translates to: HTISRCKPHGRFHQS*SEHMTECGPRTHLY Trigger: GTAAAGATGGGTCCGTGGCCCACACTCGGTCATGTGCTCAGACAACGACTGATGAAAACGCCCATGCGGTTTGCATCGACTGATAGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS GCA 72 bp | GGACCCATCTTTACTTGGTCCAGAAATAAAAGCGGCTaGCATGTGTGGCAGGCTGCAGATCTCCCTCGATCT | + |
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Preference number: 6 (lower is better) Translates to: GPIFTWSRNKSG*HVWQAADLPRS Trigger: AGATCGAGGGAGATCTGCAGCCTGCCACACATGGCAGCCGCTTTTATTTCTGGACCAAGTAAAGATGGGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS CAA 90 bp | GCTGCAGATCTCCCTCGATCTCAGGGCTGGGATCCGGTCTTGGTCTaGAGTGATAGGGATTCTCCGGTAAAGGTCGATCTGTTTTCACTT | + |
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Preference number: 6 (lower is better) Translates to: AADLPRSQGWDPVLV*SDRDSPVKVDLFSL Trigger: AAGTGAAAACAGATCGACCTTTACCGGAGAATCCCTATCACTCAAGACCAAGACCGGATCCCAGCCCTGAGATCGAGGGAGATCTGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS CAA 72 bp | CCCAGCCCAGTTTGTCCAGCACACACTCGTCAAACTTaGCCTGCTGTTTGCGACAGTGACGAAATAACTGCT | + |
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Preference number: 6 (lower is better) Translates to: PSPVCPAHTRQT*PAVCDSDEITA Trigger: AGCAGTTATTTCGTCACTGTCGCAAACAGCAGGCAAAGTTTGACGAGTGTGTGCTGGACAAACTGGGCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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| CDS CAA 72 bp | TGCCTAAAGAAGTCCAAAGCACACTTGTTGACCAGTTaGCCTTCCTCTAAACACCGCCTCGGATCTTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: CLKKSKAHLLTS*PSSKHRLGSFS Trigger: AGAGAAAGATCCGAGGCGGTGTTTAGAGGAAGGCAAACTGGTCAACAAGTGTGCTTTGGACTTCTTTAGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373768.4 |
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