RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NDUFA6 (Homo sapiens)

Ensembl gene IDs: ENSG00000184983, ENSG00000277365

Ensembl transcript IDs: ENST00000470753.1, ENST00000498737.8, ENST00000605916.1, ENST00000605927.3, ENST00000607132.1, ENST00000610887.2, ENST00000617763.1, ENST00000627617.1, ENST00000628004.1, ENST00000628198.1, ENST00000628740.2, ENST00000630201.4, ENST00000630511.1, ENST00000630971.2

Found 339 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATAGGGGCTATAGAAACAACTACATTAACAAGTCGTCCAGCCTCATaGCCAATGTCACAATTTTTGAACAGATGGCCTCCTTCCTTCCTG +
Preference number: 1 (lower is better)
Translates to: IGAIETTTLTSRPAS*PMSQFLNRWPPSFL
Trigger: CAGGAAGGAAGGAGGCCATCTGTTCAAAAATTGTGACATTGGGCATGAGGCTGGACGACTTGTTAATGTAGTTGTTTCTATAGCCCCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
3UTR CCA 90 bp ATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTaGTTCATCAATGGAATTCTATCACAAAGTGACCATTGTATAGTG +
Preference number: 1 (lower is better)
Translates to: IPRSHLLRQKEAAEN*FINGILSQSDHCIV
Trigger: CACTATACAATGGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
3UTR-3UTR GCA 90 bp TTTAAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCATTAGTCGTCCAGCCTCATaGCCAATGTCACAATTTTTG +
Preference number: 2 (lower is better)
Translates to: FKGWSLLQVAEPSLCTSISRPAS*PMSQFL
Trigger: CAAAAATTGTGACATTGGGCATGAGGCTGGACGACT...AATGGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
3UTR-3UTR GCA 90 bp ACCTGTGTTGATGTTTATTCTGCCACTGAGAGGTACACCAGGGTTTCCAAAGACAGTCGTCCAGCCTCATaGCCAATGTCACAATTTTTG +
Preference number: 2 (lower is better)
Translates to: TCVDVYSATERYTRVSKDSRPAS*PMSQFL
Trigger: CAAAAATTGTGACATTGGGCATGAGGCTGGACGACT...GTCTTTGGAAACCCTGGTGTACCTCTCAGTGGCAGAATAAACATCAACACAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
3UTR-3UTR GCA 90 bp AAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCTCCTGTTTACTGACATaGAAGGCTCTGAGAAAAATA +
Preference number: 2 (lower is better)
Translates to: KGWSLLQVAEPSLCTSIFSCLLT*KALRKI
Trigger: TATTTTTCTCAGAGCCTTGCATGTCAGTAAACAGGA...GAAAATGGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
3UTR-3UTR CCA 90 bp TTTAAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCATTCCTGACAGGAAGAGCTaGCTAATTTTAGATAATCTG +
Preference number: 2 (lower is better)
Translates to: FKGWSLLQVAEPSLCTSIPDRKS*LILDNL
Trigger: CAGATTATCTAAAATTAGCCAGCTCTTCCTGTCAGG...AATGGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
3UTR-3UTR GCA 90 bp AGAACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAAAATAGTATCAACGTaGATCTTTCCACTGAATGAC +
Preference number: 2 (lower is better)
Translates to: RTGDVYTKVPLAQAKRGCKIVST*IFPLND
Trigger: GTCATTCAGTGGAAAGATGCACGTTGATACTATTTT...GCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
3UTR-3UTR CCA 90 bp TTCAGAACCCAAGGAAAACTAGCCCATCTTGACAGCTCTACTTTTGCGCCTGTTCCTGACAGGAAGAGCTaGCTAATTTTAGATAATCTG +
Preference number: 2 (lower is better)
Translates to: FRTQGKLAHLDSSTFAPVPDRKS*LILDNL
Trigger: CAGATTATCTAAAATTAGCCAGCTCTTCCTGTCAGG...AACAGGCGCAAAAGTAGAGCTGTCAAGATGGGCTAGTTTTCCTTGGGTTCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
3UTR-3UTR GCA 90 bp GGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAAAAAATAGTATCAACGTaGATCTTTCCACTGAATGAC +
Preference number: 2 (lower is better)
Translates to: GDVYTKVPLAQAKRGCRKKIVST*IFPLND
Trigger: GTCATTCAGTGGAAAGATGCACGTTGATACTATTTT...TTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACC
42% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
3UTR-3UTR GCA 90 bp TTCAGAACCCAAGGAAAACTAGCCCATCTTGACAGCTCTACTTTTGCGCCTGTTTCCTGTTTACTGACATaGAAGGCTCTGAGAAAAATA +
Preference number: 2 (lower is better)
Translates to: FRTQGKLAHLDSSTFAPVSCLLT*KALRKI
Trigger: TATTTTTCTCAGAGCCTTGCATGTCAGTAAACAGGA...AACAGGCGCAAAAGTAGAGCTGTCAAGATGGGCTAGTTTTCCTTGGGTTCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
3UTR-3UTR GCA 90 bp AGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCTTCAGAACCCAAGGAAAACTTCCTGTTTACTGACATaGAAGGCTCTGAGAAAAATA +
Preference number: 2 (lower is better)
Translates to: SSGAKPLHIHFLQNPRKTSCLLT*KALRKI
Trigger: TATTTTTCTCAGAGCCTTGCATGTCAGTAAACAGGA...AGTTTTCCTTGGGTTCTGAAGAAAATGGATGTGCAAAGGCTTGGCTCCGCTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
3UTR-3UTR GCA 90 bp AGGGGCTATAGAAACAACTACATTAACAAGTCGTCCAGCCTCATGCCCAATGTCTCCTGTTTACTGACATaGAAGGCTCTGAGAAAAATA +
Preference number: 2 (lower is better)
Translates to: RGYRNNYINKSSSLMPNVSCLLT*KALRKI
Trigger: TATTTTTCTCAGAGCCTTGCATGTCAGTAAACAGGA...GACATTGGGCATGAGGCTGGACGACTTGTTAATGTAGTTGTTTCTATAGCCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
3UTR-3UTR GCA 90 bp AGGGGCTATAGAAACAACTACATTAACAAGTCGTCCAGCCTCATGCCCAATGTCAAAATAGTATCAACGTaGATCTTTCCACTGAATGAC +
Preference number: 2 (lower is better)
Translates to: RGYRNNYINKSSSLMPNVKIVST*IFPLND
Trigger: GTCATTCAGTGGAAAGATGCACGTTGATACTATTTT...GACATTGGGCATGAGGCTGGACGACTTGTTAATGTAGTTGTTTCTATAGCCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
3UTR-3UTR GCA 90 bp TACATTAACAAGTCGTCCAGCCTCATGCCCAATGTCACAATTTTTGAACAGATGTCCTGTTTACTGACATaGAAGGCTCTGAGAAAAATA +
Preference number: 2 (lower is better)
Translates to: YINKSSSLMPNVTIFEQMSCLLT*KALRKI
Trigger: TATTTTTCTCAGAGCCTTGCATGTCAGTAAACAGGA...CATCTGTTCAAAAATTGTGACATTGGGCATGAGGCTGGACGACTTGTTAATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
3UTR-3UTR GCA 90 bp AAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCAAAATAGTATCAACGTaGATCTTTCCACTGAATGAC +
Preference number: 2 (lower is better)
Translates to: KKRLQKIGSSMEFYHKVTKIVST*IFPLND
Trigger: GTCATTCAGTGGAAAGATGCACGTTGATACTATTTT...GGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
3UTR-3UTR GCA 90 bp AGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCATTGTAAAAATAGTATCAACGTaGATCTTTCCACTGAATGAC +
Preference number: 2 (lower is better)
Translates to: RLQKIGSSMEFYHKVTIVKIVST*IFPLND
Trigger: GTCATTCAGTGGAAAGATGCACGTTGATACTATTTT...TACAATGGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
3UTR-3UTR CAA 90 bp GGAAAACTAGCCCATCTTGACAGCTCTACTTTTGCGCCTGTTAGTGCTGCCCTGATACCAAGGTCCCACTaGCTCAGGCAAAAAGAGGCT +
Preference number: 3 (lower is better)
Translates to: GKLAHLDSSTFAPVSAALIPRSH*LRQKEA
Trigger: AGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTAT...CAGGGCAGCACTAACAGGCGCAAAAGTAGAGCTGTCAAGATGGGCTAGTTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
3UTR-3UTR CAA 90 bp AAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCTTGACAGCTCTACTTTaGCGCCTGTTAGTGCTGCCC +
Preference number: 3 (lower is better)
Translates to: KGWSLLQVAEPSLCTSIFLTALL*RLLVLP
Trigger: GGGCAGCACTAACAGGCGCAAAAGTAGAGCTGTCAA...GAAAATGGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
3UTR-3UTR CAA 90 bp AAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCATACCAAGGTCCCACTaGCTCAGGCAAAAAGAGGCT +
Preference number: 3 (lower is better)
Translates to: KGWSLLQVAEPSLCTSIFIPRSH*LRQKEA
Trigger: AGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTAT...GAAAATGGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
3UTR-3UTR CAA 90 bp TTTAAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCATTATACCAAGGTCCCACTaGCTCAGGCAAAAAGAGGCT +
Preference number: 3 (lower is better)
Translates to: FKGWSLLQVAEPSLCTSIIPRSH*LRQKEA
Trigger: AGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTAT...AATGGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
3UTR-3UTR CAA 90 bp AGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCTTCAGAACCCAAGGAAAACTTTGACAGCTCTACTTTaGCGCCTGTTAGTGCTGCCC +
Preference number: 3 (lower is better)
Translates to: SSGAKPLHIHFLQNPRKTLTALL*RLLVLP
Trigger: GGGCAGCACTAACAGGCGCAAAAGTAGAGCTGTCAA...AGTTTTCCTTGGGTTCTGAAGAAAATGGATGTGCAAAGGCTTGGCTCCGCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
3UTR-3UTR CAA 90 bp ACCTGTGTTGATGTTTATTCTGCCACTGAGAGGTACACCAGGGTTTCCAAAGACAGCGGAGCCAAGCCTTaGCACATCCATTTTCTTCAG +
Preference number: 3 (lower is better)
Translates to: TCVDVYSATERYTRVSKDSGAKP*HIHFLQ
Trigger: CTGAAGAAAATGGATGTGCAAAGGCTTGGCTCCGCT...GTCTTTGGAAACCCTGGTGTACCTCTCAGTGGCAGAATAAACATCAACACAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
3UTR GCA 72 bp GGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTaGACATCCATTTTCTTCAGAACCCAAGGAAAACTA +
Preference number: 3 (lower is better)
Translates to: GWSLLQVAEPSL*TSIFFRTQGKL
Trigger: TAGTTTTCCTTGGGTTCTGAAGAAAATGGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
3UTR-3UTR CAA 90 bp ACCTGTGTTGATGTTTATTCTGCCACTGAGAGGTACACCAGGGTTTCCAAAGACCCAATGTCACAATTTTaGAACAGATGGCCTCCTTCC +
Preference number: 3 (lower is better)
Translates to: TCVDVYSATERYTRVSKDPMSQF*NRWPPS
Trigger: GGAAGGAGGCCATCTGTTCAAAAATTGTGACATTGG...GTCTTTGGAAACCCTGGTGTACCTCTCAGTGGCAGAATAAACATCAACACAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
3UTR-3UTR CAA 90 bp TACATTAACAAGTCGTCCAGCCTCATGCCCAATGTCACAATTTTTGAACAGATGATACCAAGGTCCCACTaGCTCAGGCAAAAAGAGGCT +
Preference number: 3 (lower is better)
Translates to: YINKSSSLMPNVTIFEQMIPRSH*LRQKEA
Trigger: AGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTAT...CATCTGTTCAAAAATTGTGACATTGGGCATGAGGCTGGACGACTTGTTAATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
3UTR GCA 72 bp ATAGAAACAACTACATTAACAAGTCGTCCAGCCTCATaGCCAATGTCACAATTTTTGAACAGATGGCCTCCT +
Preference number: 3 (lower is better)
Translates to: IETTTLTSRPAS*PMSQFLNRWPP
Trigger: AGGAGGCCATCTGTTCAAAAATTGTGACATTGGGCATGAGGCTGGACGACTTGTTAATGTAGTTGTTTCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
3UTR CCA 72 bp TCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTaGTTCATCAATGGAATTCTATCACAAAGTGACCAT +
Preference number: 3 (lower is better)
Translates to: SHLLRQKEAAEN*FINGILSQSDH
Trigger: ATGGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp ACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAGCGGTAGAAGTAGCTTaGCGGACGCCGCTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: TGDVYTKVPLAQAKRGCRAVEVA*RTPLPA
Trigger: GGCGGGGAGCGGCGTCCGCCAAGCTACTTCTACCGC...TCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp AGAACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAACGCCCCGCCTGTATaGTGGGTGGGCGGGAGGATG +
Preference number: 4 (lower is better)
Translates to: RTGDVYTKVPLAQAKRGCNAPPV*WVGGRM
Trigger: CATCCTCCCGCCCACCCAGCATACAGGCGGGGCGTT...GCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
CDS-3UTR GCA 90 bp GGAAAACTAGCCCATCTTGACAGCTCTACTTTTGCGCCTGTTAGTGCTGCCCTGACAACCCCACCCCTTTaGAAGCAGCGCGTGCGGACC +
Preference number: 4 (lower is better)
Translates to: GKLAHLDSSTFAPVSAALTTPPL*KQRVRT
Trigger: GGTCCGCACGCGCTGCTTGCAAAGGGGTGGGGTTGT...CAGGGCAGCACTAACAGGCGCAAAAGTAGAGCTGTCAAGATGGGCTAGTTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
CDS-3UTR CCA 90 bp GGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAAGCGGTAGAAGTAGCTTaGCGGACGCCGCTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: GDVYTKVPLAQAKRGCRKAVEVA*RTPLPA
Trigger: GGCGGGGAGCGGCGTCCGCCAAGCTACTTCTACCGC...TTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp CATTTTAAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCCGCGCACCCTCCGCTTaGCCTCGTTCATGTCCCGAC +
Preference number: 4 (lower is better)
Translates to: HFKGWSLLQVAEPSLCTSRAPSA*PRSCPD
Trigger: GTCGGGACATGAACGAGGCCAAGCGGAGGGTGCGCG...GGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp AGAACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCGCCCCGCCTGTATGCTaGGTGGGCGGGAGGATGACT +
Preference number: 4 (lower is better)
Translates to: RTGDVYTKVPLAQAKRGCAPPVC*VGGRMT
Trigger: AGTCATCCTCCCGCCCACCCAGCATACAGGCGGGGC...GCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
CDS-3UTR CCA 90 bp AAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCGCCCCGCCTGTATGCTaGGTGGGCGGGAGGATGACT +
Preference number: 4 (lower is better)
Translates to: KGWSLLQVAEPSLCTSIFAPPVC*VGGRMT
Trigger: AGTCATCCTCCCGCCCACCCAGCATACAGGCGGGGC...GAAAATGGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
CDS-3UTR TCA 90 bp AGAACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAAGCCTCTCTCTGGCTaGGCGAACGGTGGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: RTGDVYTKVPLAQAKRGCKPLSG*ANGGCC
Trigger: GCAGCACCCACCGTTCGCTCAGCCAGAGAGAGGCTT...GCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
CDS-3UTR GCA 90 bp GGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAAAACGCCCCGCCTGTATaGTGGGTGGGCGGGAGGATG +
Preference number: 4 (lower is better)
Translates to: GDVYTKVPLAQAKRGCRKNAPPV*WVGGRM
Trigger: CATCCTCCCGCCCACCCAGCATACAGGCGGGGCGTT...TTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
CDS-3UTR GCA 90 bp CATTTTAAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCTTTGCAAGCAGCGCGTaGGGACCGCGGGCGAATGTC +
Preference number: 4 (lower is better)
Translates to: HFKGWSLLQVAEPSLCTSFASSA*GPRANV
Trigger: GACATTCGCCCGCGGTCCGCACGCGCTGCTTGCAAA...GGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
CDS-3UTR GCA 90 bp ACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGATTTGCAAGCAGCGCGTaGGGACCGCGGGCGAATGTC +
Preference number: 4 (lower is better)
Translates to: TGDVYTKVPLAQAKRGCRFASSA*GPRANV
Trigger: GACATTCGCCCGCGGTCCGCACGCGCTGCTTGCAAA...TCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
CDS-3UTR CCA 90 bp AGGGGCTATAGAAACAACTACATTAACAAGTCGTCCAGCCTCATGCCCAATGTCGCGGTAGAAGTAGCTTaGCGGACGCCGCTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: RGYRNNYINKSSSLMPNVAVEVA*RTPLPA
Trigger: GGCGGGGAGCGGCGTCCGCCAAGCTACTTCTACCGC...GACATTGGGCATGAGGCTGGACGACTTGTTAATGTAGTTGTTTCTATAGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp TTCAGAACCCAAGGAAAACTAGCCCATCTTGACAGCTCTACTTTTGCGCCTGTTGCGGTAGAAGTAGCTTaGCGGACGCCGCTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: FRTQGKLAHLDSSTFAPVAVEVA*RTPLPA
Trigger: GGCGGGGAGCGGCGTCCGCCAAGCTACTTCTACCGC...AACAGGCGCAAAAGTAGAGCTGTCAAGATGGGCTAGTTTTCCTTGGGTTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp TTTAAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCATTCGCGCACCCTCCGCTTaGCCTCGTTCATGTCCCGAC +
Preference number: 4 (lower is better)
Translates to: FKGWSLLQVAEPSLCTSIRAPSA*PRSCPD
Trigger: GTCGGGACATGAACGAGGCCAAGCGGAGGGTGCGCG...AATGGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp GGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAACGCGCACCCTCCGCTTaGCCTCGTTCATGTCCCGAC +
Preference number: 4 (lower is better)
Translates to: GDVYTKVPLAQAKRGCRKRAPSA*PRSCPD
Trigger: GTCGGGACATGAACGAGGCCAAGCGGAGGGTGCGCG...TTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp GGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAAGCCCCGCCTGTATGCTaGGTGGGCGGGAGGATGACT +
Preference number: 4 (lower is better)
Translates to: GDVYTKVPLAQAKRGCRKAPPVC*VGGRMT
Trigger: AGTCATCCTCCCGCCCACCCAGCATACAGGCGGGGC...TTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
CDS-3UTR CCA 90 bp TTTAAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCATTGCCCCGCCTGTATGCTaGGTGGGCGGGAGGATGACT +
Preference number: 4 (lower is better)
Translates to: FKGWSLLQVAEPSLCTSIAPPVC*VGGRMT
Trigger: AGTCATCCTCCCGCCCACCCAGCATACAGGCGGGGC...AATGGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
CDS-3UTR GCA 90 bp GGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAAACAACCCCACCCCTTTaGAAGCAGCGCGTGCGGACC +
Preference number: 4 (lower is better)
Translates to: GDVYTKVPLAQAKRGCRKTTPPL*KQRVRT
Trigger: GGTCCGCACGCGCTGCTTGCAAAGGGGTGGGGTTGT...TTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
CDS-3UTR CCA 90 bp ACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAACGCGCACCCTCCGCTTaGCCTCGTTCATGTCCCGAC +
Preference number: 4 (lower is better)
Translates to: TKVPLAQAKRGCRKLVHQRAPSA*PRSCPD
Trigger: GTCGGGACATGAACGAGGCCAAGCGGAGGGTGCGCG...TTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp ACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGATGGCTGAGCGAACGGTaGGTGCTGCGCATGCTCATC +
Preference number: 4 (lower is better)
Translates to: TGDVYTKVPLAQAKRGCRWLSER*VLRMLI
Trigger: GATGAGCATGCGCAGCACCCACCGTTCGCTCAGCCA...TCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
CDS-3UTR TCA 90 bp GGAAAACTAGCCCATCTTGACAGCTCTACTTTTGCGCCTGTTAGTGCTGCCCTGCTGTTAGTGCTGCCCTaGTCCCTGACAGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: GKLAHLDSSTFAPVSAALLLVLP*SLTGRA
Trigger: AGCTCTTCCTGTCAGGGATCAGGGCAGCACTAACAG...CAGGGCAGCACTAACAGGCGCAAAAGTAGAGCTGTCAAGATGGGCTAGTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp ACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAAAAGCCTCTCTCTGGCTaGGCGAACGGTGGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: TKVPLAQAKRGCRKLVHQKPLSG*ANGGCC
Trigger: GCAGCACCCACCGTTCGCTCAGCCAGAGAGAGGCTT...TTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
CDS-3UTR TCA 90 bp AGGGGCTATAGAAACAACTACATTAACAAGTCGTCCAGCCTCATGCCCAATGTCAAGCCTCTCTCTGGCTaGGCGAACGGTGGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: RGYRNNYINKSSSLMPNVKPLSG*ANGGCC
Trigger: GCAGCACCCACCGTTCGCTCAGCCAGAGAGAGGCTT...GACATTGGGCATGAGGCTGGACGACTTGTTAATGTAGTTGTTTCTATAGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
CDS-3UTR GCA 90 bp AGTCGTCCAGCCTCATGCCCAATGTCACAATTTTTGAACAGATGGCCTCCTTCCCGCTCCCCGCCATCTTaGCAAAGCATCCACTCCACA +
Preference number: 4 (lower is better)
Translates to: SRPASCPMSQFLNRWPPSRSPPS*QSIHST
Trigger: TGTGGAGTGGATGCTTTGGCAAGATGGCGGGGAGCG...GGAAGGAGGCCATCTGTTCAAAAATTGTGACATTGGGCATGAGGCTGGACGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp AGAACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCCGCTCCCCGCCATCTTaGCAAAGCATCCACTCCACA +
Preference number: 4 (lower is better)
Translates to: RTGDVYTKVPLAQAKRGCRSPPS*QSIHST
Trigger: TGTGGAGTGGATGCTTTGGCAAGATGGCGGGGAGCG...GCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp AAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCCGCTCCCCGCCATCTTaGCAAAGCATCCACTCCACA +
Preference number: 4 (lower is better)
Translates to: KGWSLLQVAEPSLCTSIFRSPPS*QSIHST
Trigger: TGTGGAGTGGATGCTTTGGCAAGATGGCGGGGAGCG...GAAAATGGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp AGGGGCTATAGAAACAACTACATTAACAAGTCGTCCAGCCTCATGCCCAATGTCACAACCCCACCCCTTTaGAAGCAGCGCGTGCGGACC +
Preference number: 4 (lower is better)
Translates to: RGYRNNYINKSSSLMPNVTTPPL*KQRVRT
Trigger: GGTCCGCACGCGCTGCTTGCAAAGGGGTGGGGTTGT...GACATTGGGCATGAGGCTGGACGACTTGTTAATGTAGTTGTTTCTATAGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
CDS-3UTR CCA 90 bp TTTAAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCATTGGCTCTCGGATTGGCTaGGAAGCCTCTCTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: FKGWSLLQVAEPSLCTSIGSRIG*EASLWL
Trigger: CAGCCAGAGAGAGGCTTCCCAGCCAATCCGAGAGCC...AATGGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
CDS-3UTR CCA 90 bp AAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCCTGAGGCTCTCGGATTaGCTGGGAAGCCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: KGWSLLQVAEPSLCTSIFLRLSD*LGSLSL
Trigger: CAGAGAGAGGCTTCCCAGCCAATCCGAGAGCCTCAG...GAAAATGGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
CDS-3UTR TCA 90 bp ACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGACTGTTAGTGCTGCCCTaGTCCCTGACAGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: TGDVYTKVPLAQAKRGCRLLVLP*SLTGRA
Trigger: AGCTCTTCCTGTCAGGGATCAGGGCAGCACTAACAG...TCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp AGAACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCCTGTTAGTGCTGCCCTaGTCCCTGACAGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: RTGDVYTKVPLAQAKRGCLLVLP*SLTGRA
Trigger: AGCTCTTCCTGTCAGGGATCAGGGCAGCACTAACAG...GCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp AAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCTCCAGCTGGAATTGGTaGACAGTGTTCGGCACCTCC +
Preference number: 4 (lower is better)
Translates to: KGWSLLQVAEPSLCTSIFSSWNW*TVFGTS
Trigger: GGAGGTGCCGAACACTGTGCACCAATTCCAGCTGGA...GAAAATGGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp AGAACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCTCCAGCTGGAATTGGTaGACAGTGTTCGGCACCTCC +
Preference number: 4 (lower is better)
Translates to: RTGDVYTKVPLAQAKRGCSSWNW*TVFGTS
Trigger: GGAGGTGCCGAACACTGTGCACCAATTCCAGCTGGA...GCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp CATTTTAAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCGCGAACGGTGGGTGCTaGGCATGCTCATCTACAGAA +
Preference number: 4 (lower is better)
Translates to: HFKGWSLLQVAEPSLCTSANGGC*ACSSTE
Trigger: TTCTGTAGATGAGCATGCGCAGCACCCACCGTTCGC...GGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
CDS-3UTR CCA 90 bp AGGGGCTATAGAAACAACTACATTAACAAGTCGTCCAGCCTCATGCCCAATGTCTGGCTGAGCGAACGGTaGGTGCTGCGCATGCTCATC +
Preference number: 4 (lower is better)
Translates to: RGYRNNYINKSSSLMPNVWLSER*VLRMLI
Trigger: GATGAGCATGCGCAGCACCCACCGTTCGCTCAGCCA...GACATTGGGCATGAGGCTGGACGACTTGTTAATGTAGTTGTTTCTATAGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
CDS-3UTR CCA 90 bp ACCTGTGTTGATGTTTATTCTGCCACTGAGAGGTACACCAGGGTTTCCAAAGACTGGGAAGCCTCTCTCTaGCTGAGCGAACGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: TCVDVYSATERYTRVSKDWEASL*LSERWV
Trigger: CACCCACCGTTCGCTCAGCCAGAGAGAGGCTTCCCA...GTCTTTGGAAACCCTGGTGTACCTCTCAGTGGCAGAATAAACATCAACACAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
CDS-3UTR CCA 90 bp AGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCTTCAGAACCCAAGGAAAACTTGGGAAGCCTCTCTCTaGCTGAGCGAACGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: SSGAKPLHIHFLQNPRKTWEASL*LSERWV
Trigger: CACCCACCGTTCGCTCAGCCAGAGAGAGGCTTCCCA...AGTTTTCCTTGGGTTCTGAAGAAAATGGATGTGCAAAGGCTTGGCTCCGCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
CDS-3UTR CCA 90 bp AGGGGCTATAGAAACAACTACATTAACAAGTCGTCCAGCCTCATGCCCAATGTCGGCTCTCGGATTGGCTaGGAAGCCTCTCTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RGYRNNYINKSSSLMPNVGSRIG*EASLWL
Trigger: CAGCCAGAGAGAGGCTTCCCAGCCAATCCGAGAGCC...GACATTGGGCATGAGGCTGGACGACTTGTTAATGTAGTTGTTTCTATAGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
CDS-3UTR CCA 90 bp TTTAAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCATTCTGAGGCTCTCGGATTaGCTGGGAAGCCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: FKGWSLLQVAEPSLCTSILRLSD*LGSLSL
Trigger: CAGAGAGAGGCTTCCCAGCCAATCCGAGAGCCTCAG...AATGGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
CDS-3UTR TCA 90 bp AGTCGTCCAGCCTCATGCCCAATGTCACAATTTTTGAACAGATGGCCTCCTTCCCGTTCATGTCCCGACTaGAAATGGGCTTCACGAAGG +
Preference number: 4 (lower is better)
Translates to: SRPASCPMSQFLNRWPPSRSCPD*KWASRR
Trigger: CCTTCGTGAAGCCCATTTTCAGTCGGGACATGAACG...GGAAGGAGGCCATCTGTTCAAAAATTGTGACATTGGGCATGAGGCTGGACGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp ACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGACGTTCATGTCCCGACTaGAAATGGGCTTCACGAAGG +
Preference number: 4 (lower is better)
Translates to: TGDVYTKVPLAQAKRGCRRSCPD*KWASRR
Trigger: CCTTCGTGAAGCCCATTTTCAGTCGGGACATGAACG...TCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp ACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAACGCTCCCCGCCATCTTaGCAAAGCATCCACTCCACA +
Preference number: 4 (lower is better)
Translates to: TKVPLAQAKRGCRKLVHQRSPPS*QSIHST
Trigger: TGTGGAGTGGATGCTTTGGCAAGATGGCGGGGAGCG...TTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp TTTAAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCATTTCCAGCTGGAATTGGTaGACAGTGTTCGGCACCTCC +
Preference number: 4 (lower is better)
Translates to: FKGWSLLQVAEPSLCTSISSWNW*TVFGTS
Trigger: GGAGGTGCCGAACACTGTGCACCAATTCCAGCTGGA...AATGGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp TCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTACAACCCCACCCCTTTaGAAGCAGCGCGTGCGGACC +
Preference number: 4 (lower is better)
Translates to: SHLLRQKEAAENWFINGITTPPL*KQRVRT
Trigger: GGTCCGCACGCGCTGCTTGCAAAGGGGTGGGGTTGT...AATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
CDS-3UTR CCA 90 bp CTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAGCGGTAGAAGTAGCTTaGCGGACGCCGCTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: LRQKEAAENWFINGILSQAVEVA*RTPLPA
Trigger: GGCGGGGAGCGGCGTCCGCCAAGCTACTTCTACCGC...TTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp CATTTTAAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCATGTCCAGCTGGAATTaGTGCACAGTGTTCGGCACC +
Preference number: 4 (lower is better)
Translates to: HFKGWSLLQVAEPSLCTSMSSWN*CTVFGT
Trigger: GGTGCCGAACACTGTGCACCAATTCCAGCTGGACAT...GGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp AGAACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCATGTCCAGCTGGAATTaGTGCACAGTGTTCGGCACC +
Preference number: 4 (lower is better)
Translates to: RTGDVYTKVPLAQAKRGCMSSWN*CTVFGT
Trigger: GGTGCCGAACACTGTGCACCAATTCCAGCTGGACAT...GCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp GTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCACTGAGGCTCTCGGATTaGCTGGGAAGCCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: VYQGPTCSGKKRLQKIGSLRLSD*LGSLSL
Trigger: CAGAGAGAGGCTTCCCAGCCAATCCGAGAGCCTCAG...TGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
CDS-3UTR TCA 90 bp GGAAAACTAGCCCATCTTGACAGCTCTACTTTTGCGCCTGTTAGTGCTGCCCTGCATCTTTCCACTGAATaGCTTCATGGATCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GKLAHLDSSTFAPVSAALHLSTE*LHGSWP
Trigger: TGGCCACGATCCATGAAGTCATTCAGTGGAAAGATG...CAGGGCAGCACTAACAGGCGCAAAAGTAGAGCTGTCAAGATGGGCTAGTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp TTTAAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCATTCGTTCATGTCCCGACTaGAAATGGGCTTCACGAAGG +
Preference number: 4 (lower is better)
Translates to: FKGWSLLQVAEPSLCTSIRSCPD*KWASRR
Trigger: CCTTCGTGAAGCCCATTTTCAGTCGGGACATGAACG...AATGGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp ACCTGTGTTGATGTTTATTCTGCCACTGAGAGGTACACCAGGGTTTCCAAAGACCTGTTAGTGCTGCCCTaGTCCCTGACAGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: TCVDVYSATERYTRVSKDLLVLP*SLTGRA
Trigger: AGCTCTTCCTGTCAGGGATCAGGGCAGCACTAACAG...GTCTTTGGAAACCCTGGTGTACCTCTCAGTGGCAGAATAAACATCAACACAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp TTCAGAACCCAAGGAAAACTAGCCCATCTTGACAGCTCTACTTTTGCGCCTGTTCTGTTAGTGCTGCCCTaGTCCCTGACAGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: FRTQGKLAHLDSSTFAPVLLVLP*SLTGRA
Trigger: AGCTCTTCCTGTCAGGGATCAGGGCAGCACTAACAG...AACAGGCGCAAAAGTAGAGCTGTCAAGATGGGCTAGTTTTCCTTGGGTTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp GGAAAACTAGCCCATCTTGACAGCTCTACTTTTGCGCCTGTTAGTGCTGCCCTGTGTTTATTCTGCCACTaGGAGGTACACCAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: GKLAHLDSSTFAPVSAALCLFCH*EVHQGF
Trigger: GAAACCCTGGTGTACCTCTCAGTGGCAGAATAAACA...CAGGGCAGCACTAACAGGCGCAAAAGTAGAGCTGTCAAGATGGGCTAGTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp CTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAACGCCCCGCCTGTATaGTGGGTGGGCGGGAGGATG +
Preference number: 4 (lower is better)
Translates to: LRQKEAAENWFINGILSQNAPPV*WVGGRM
Trigger: CATCCTCCCGCCCACCCAGCATACAGGCGGGGCGTT...TTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
CDS-3UTR CCA 90 bp AGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCATTGTAGCGGTAGAAGTAGCTTaGCGGACGCCGCTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: RLQKIGSSMEFYHKVTIVAVEVA*RTPLPA
Trigger: GGCGGGGAGCGGCGTCCGCCAAGCTACTTCTACCGC...TACAATGGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp AAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCGCGGTAGAAGTAGCTTaGCGGACGCCGCTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: KKRLQKIGSSMEFYHKVTAVEVA*RTPLPA
Trigger: GGCGGGGAGCGGCGTCCGCCAAGCTACTTCTACCGC...GGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp AAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCATGCGGTAGAAGTAGCTTaGCGGACGCCGCTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: KEAAENWFINGILSQSDHAVEVA*RTPLPA
Trigger: GGCGGGGAGCGGCGTCCGCCAAGCTACTTCTACCGC...ATGGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp CTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAACGCGCACCCTCCGCTTaGCCTCGTTCATGTCCCGAC +
Preference number: 4 (lower is better)
Translates to: LRQKEAAENWFINGILSQRAPSA*PRSCPD
Trigger: GTCGGGACATGAACGAGGCCAAGCGGAGGGTGCGCG...TTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp GGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAAATGTCCAGCTGGAATTaGTGCACAGTGTTCGGCACC +
Preference number: 4 (lower is better)
Translates to: GDVYTKVPLAQAKRGCRKMSSWN*CTVFGT
Trigger: GGTGCCGAACACTGTGCACCAATTCCAGCTGGACAT...TTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp AAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCAATGTCTTTTCCCATTaGCTAAGGAGGAACGCCCCG +
Preference number: 4 (lower is better)
Translates to: KGWSLLQVAEPSLCTSIFNVFSH*LRRNAP
Trigger: CGGGGCGTTCCTCCTTAGCCAATGGGAAAAGACATT...GAAAATGGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
CDS-3UTR CCA 90 bp CATTTTAAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCAATGTCTTTTCCCATTaGCTAAGGAGGAACGCCCCG +
Preference number: 4 (lower is better)
Translates to: HFKGWSLLQVAEPSLCTSNVFSH*LRRNAP
Trigger: CGGGGCGTTCCTCCTTAGCCAATGGGAAAAGACATT...GGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
CDS-3UTR TCA 90 bp ACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGACATCTTTCCACTGAATaGCTTCATGGATCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: TGDVYTKVPLAQAKRGCRHLSTE*LHGSWP
Trigger: TGGCCACGATCCATGAAGTCATTCAGTGGAAAGATG...TCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp AGAACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCCGTGCATCTTTCCACTaGATGACTTCATGGATCGTG +
Preference number: 4 (lower is better)
Translates to: RTGDVYTKVPLAQAKRGCRASFH*MTSWIV
Trigger: CACGATCCATGAAGTCATTCAGTGGAAAGATGCACG...GCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp ACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGACGTGCATCTTTCCACTaGATGACTTCATGGATCGTG +
Preference number: 4 (lower is better)
Translates to: TGDVYTKVPLAQAKRGCRRASFH*MTSWIV
Trigger: CACGATCCATGAAGTCATTCAGTGGAAAGATGCACG...TCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp ACCTGTGTTGATGTTTATTCTGCCACTGAGAGGTACACCAGGGTTTCCAAAGACCGTTCATGTCCCGACTaGAAATGGGCTTCACGAAGG +
Preference number: 4 (lower is better)
Translates to: TCVDVYSATERYTRVSKDRSCPD*KWASRR
Trigger: CCTTCGTGAAGCCCATTTTCAGTCGGGACATGAACG...GTCTTTGGAAACCCTGGTGTACCTCTCAGTGGCAGAATAAACATCAACACAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp CATTTTAAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCAAAACTAGCCCATCTTaGCAGCTCTACTTTTGCGCC +
Preference number: 4 (lower is better)
Translates to: HFKGWSLLQVAEPSLCTSKTSPS*QLYFCA
Trigger: GGCGCAAAAGTAGAGCTGTCAAGATGGGCTAGTTTT...GGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp AAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCTGTTTATTCTGCCACTaGGAGGTACACCAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: KGWSLLQVAEPSLCTSIFCLFCH*EVHQGF
Trigger: GAAACCCTGGTGTACCTCTCAGTGGCAGAATAAACA...GAAAATGGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp TCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCGCTCCCCGCCATCTTaGCAAAGCATCCACTCCACA +
Preference number: 4 (lower is better)
Translates to: SHLLRQKEAAENWFINGIRSPPS*QSIHST
Trigger: TGTGGAGTGGATGCTTTGGCAAGATGGCGGGGAGCG...AATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp AGTCGTCCAGCCTCATGCCCAATGTCACAATTTTTGAACAGATGGCCTCCTTCCGCGGAGCCAAGCCTTTaGACATCCATTTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: SRPASCPMSQFLNRWPPSAEPSL*TSIFFR
Trigger: TCTGAAGAAAATGGATGTGCAAAGGCTTGGCTCCGC...GGAAGGAGGCCATCTGTTCAAAAATTGTGACATTGGGCATGAGGCTGGACGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp AAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCAACGCCCCGCCTGTATaGTGGGTGGGCGGGAGGATG +
Preference number: 4 (lower is better)
Translates to: KKRLQKIGSSMEFYHKVTNAPPV*WVGGRM
Trigger: CATCCTCCCGCCCACCCAGCATACAGGCGGGGCGTT...GGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
CDS-3UTR CCA 90 bp GGAAAACTAGCCCATCTTGACAGCTCTACTTTTGCGCCTGTTAGTGCTGCCCTGGGCGCTTCTGTTTCATaGAAGAACCGCATAACATGT +
Preference number: 4 (lower is better)
Translates to: GKLAHLDSSTFAPVSAALGASVS*KNRITC
Trigger: ACATGTTATGCGGTTCTTCCATGAAACAGAAGCGCC...CAGGGCAGCACTAACAGGCGCAAAAGTAGAGCTGTCAAGATGGGCTAGTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp AGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCTTCAGAACCCAAGGAAAACTATGTCCAGCTGGAATTaGTGCACAGTGTTCGGCACC +
Preference number: 4 (lower is better)
Translates to: SSGAKPLHIHFLQNPRKTMSSWN*CTVFGT
Trigger: GGTGCCGAACACTGTGCACCAATTCCAGCTGGACAT...AGTTTTCCTTGGGTTCTGAAGAAAATGGATGTGCAAAGGCTTGGCTCCGCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp AAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCATGCCCCGCCTGTATGCTaGGTGGGCGGGAGGATGACT +
Preference number: 4 (lower is better)
Translates to: KEAAENWFINGILSQSDHAPPVC*VGGRMT
Trigger: AGTCATCCTCCCGCCCACCCAGCATACAGGCGGGGC...ATGGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
CDS-3UTR CCA 90 bp GGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAAAATGTCTTTTCCCATTaGCTAAGGAGGAACGCCCCG +
Preference number: 4 (lower is better)
Translates to: GDVYTKVPLAQAKRGCRKNVFSH*LRRNAP
Trigger: CGGGGCGTTCCTCCTTAGCCAATGGGAAAAGACATT...TTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
CDS-3UTR TCA 90 bp TCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTGTTAGTGCTGCCCTaGTCCCTGACAGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: SHLLRQKEAAENWFINGILLVLP*SLTGRA
Trigger: AGCTCTTCCTGTCAGGGATCAGGGCAGCACTAACAG...AATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp GGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAAAAAACTAGCCCATCTTaGCAGCTCTACTTTTGCGCC +
Preference number: 4 (lower is better)
Translates to: GDVYTKVPLAQAKRGCRKKTSPS*QLYFCA
Trigger: GGCGCAAAAGTAGAGCTGTCAAGATGGGCTAGTTTT...TTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACC
48% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp TACATTAACAAGTCGTCCAGCCTCATGCCCAATGTCACAATTTTTGAACAGATGCGCTCCCCGCCATCTTaGCAAAGCATCCACTCCACA +
Preference number: 4 (lower is better)
Translates to: YINKSSSLMPNVTIFEQMRSPPS*QSIHST
Trigger: TGTGGAGTGGATGCTTTGGCAAGATGGCGGGGAGCG...CATCTGTTCAAAAATTGTGACATTGGGCATGAGGCTGGACGACTTGTTAATGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp TCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTTCCAGCTGGAATTGGTaGACAGTGTTCGGCACCTCC +
Preference number: 4 (lower is better)
Translates to: SHLLRQKEAAENWFINGISSWNW*TVFGTS
Trigger: GGAGGTGCCGAACACTGTGCACCAATTCCAGCTGGA...AATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp ACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAGTCGTCCAGCCTCATaGCCAATGTCACAATTTTTG +
Preference number: 4 (lower is better)
Translates to: TGDVYTKVPLAQAKRGCRSRPAS*PMSQFL
Trigger: CAAAAATTGTGACATTGGGCATGAGGCTGGACGACT...TCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp AGTCGTCCAGCCTCATGCCCAATGTCACAATTTTTGAACAGATGGCCTCCTTCCAGTCGTCCAGCCTCATaGCCAATGTCACAATTTTTG +
Preference number: 4 (lower is better)
Translates to: SRPASCPMSQFLNRWPPSSRPAS*PMSQFL
Trigger: CAAAAATTGTGACATTGGGCATGAGGCTGGACGACT...GGAAGGAGGCCATCTGTTCAAAAATTGTGACATTGGGCATGAGGCTGGACGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp GGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAAGCGGAGCCAAGCCTTTaGACATCCATTTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: GDVYTKVPLAQAKRGCRKAEPSL*TSIFFR
Trigger: TCTGAAGAAAATGGATGTGCAAAGGCTTGGCTCCGC...TTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp AAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCTTTGCAAGCAGCGCGTaGGGACCGCGGGCGAATGTC +
Preference number: 4 (lower is better)
Translates to: KKRLQKIGSSMEFYHKVTFASSA*GPRANV
Trigger: GACATTCGCCCGCGGTCCGCACGCGCTGCTTGCAAA...GGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
CDS-3UTR GCA 90 bp AGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCATTGTATTTGCAAGCAGCGCGTaGGGACCGCGGGCGAATGTC +
Preference number: 4 (lower is better)
Translates to: RLQKIGSSMEFYHKVTIVFASSA*GPRANV
Trigger: GACATTCGCCCGCGGTCCGCACGCGCTGCTTGCAAA...TACAATGGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
CDS-3UTR GCA 90 bp AAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCACAACCCCACCCCTTTaGAAGCAGCGCGTGCGGACC +
Preference number: 4 (lower is better)
Translates to: KKRLQKIGSSMEFYHKVTTTPPL*KQRVRT
Trigger: GGTCCGCACGCGCTGCTTGCAAAGGGGTGGGGTTGT...GGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
CDS-3UTR CCA 90 bp CATTTTAAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCGGCGCTTCTGTTTCATaGAAGAACCGCATAACATGT +
Preference number: 4 (lower is better)
Translates to: HFKGWSLLQVAEPSLCTSGASVS*KNRITC
Trigger: ACATGTTATGCGGTTCTTCCATGAAACAGAAGCGCC...GGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp AGAACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCGGCGCTTCTGTTTCATaGAAGAACCGCATAACATGT +
Preference number: 4 (lower is better)
Translates to: RTGDVYTKVPLAQAKRGCGASVS*KNRITC
Trigger: ACATGTTATGCGGTTCTTCCATGAAACAGAAGCGCC...GCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp ACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAGGCGCTTCTGTTTCATaGAAGAACCGCATAACATGT +
Preference number: 4 (lower is better)
Translates to: TGDVYTKVPLAQAKRGCRGASVS*KNRITC
Trigger: ACATGTTATGCGGTTCTTCCATGAAACAGAAGCGCC...TCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp ACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAGAAATCCTTTGGCCTTaGCGCTTCTGTTTCATGGAA +
Preference number: 4 (lower is better)
Translates to: TGDVYTKVPLAQAKRGCREILWP*RFCFME
Trigger: TTCCATGAAACAGAAGCGCCAAGGCCAAAGGATTTC...TCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp AAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCGAAATCCTTTGGCCTTaGCGCTTCTGTTTCATGGAA +
Preference number: 4 (lower is better)
Translates to: KGWSLLQVAEPSLCTSIFEILWP*RFCFME
Trigger: TTCCATGAAACAGAAGCGCCAAGGCCAAAGGATTTC...GAAAATGGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp AGTCGTCCAGCCTCATGCCCAATGTCACAATTTTTGAACAGATGGCCTCCTTCCGAAATCCTTTGGCCTTaGCGCTTCTGTTTCATGGAA +
Preference number: 4 (lower is better)
Translates to: SRPASCPMSQFLNRWPPSEILWP*RFCFME
Trigger: TTCCATGAAACAGAAGCGCCAAGGCCAAAGGATTTC...GGAAGGAGGCCATCTGTTCAAAAATTGTGACATTGGGCATGAGGCTGGACGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp AGAACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCGGCCAACATAGAACTTaGATAGGAAATCCTTTGGCC +
Preference number: 4 (lower is better)
Translates to: RTGDVYTKVPLAQAKRGCGQHRT*IGNPLA
Trigger: GGCCAAAGGATTTCCTATCCAAGTTCTATGTTGGCC...GCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp ACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAGGCCAACATAGAACTTaGATAGGAAATCCTTTGGCC +
Preference number: 4 (lower is better)
Translates to: TGDVYTKVPLAQAKRGCRGQHRT*IGNPLA
Trigger: GGCCAAAGGATTTCCTATCCAAGTTCTATGTTGGCC...TCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp AGTCGTCCAGCCTCATGCCCAATGTCACAATTTTTGAACAGATGGCCTCCTTCCGGCCAACATAGAACTTaGATAGGAAATCCTTTGGCC +
Preference number: 4 (lower is better)
Translates to: SRPASCPMSQFLNRWPPSGQHRT*IGNPLA
Trigger: GGCCAAAGGATTTCCTATCCAAGTTCTATGTTGGCC...GGAAGGAGGCCATCTGTTCAAAAATTGTGACATTGGGCATGAGGCTGGACGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp AAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCGGCCAACATAGAACTTaGATAGGAAATCCTTTGGCC +
Preference number: 4 (lower is better)
Translates to: KGWSLLQVAEPSLCTSIFGQHRT*IGNPLA
Trigger: GGCCAAAGGATTTCCTATCCAAGTTCTATGTTGGCC...GAAAATGGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp GTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCAAATGTCTTTTCCCATTaGCTAAGGAGGAACGCCCCG +
Preference number: 4 (lower is better)
Translates to: VYQGPTCSGKKRLQKIGSNVFSH*LRRNAP
Trigger: CGGGGCGTTCCTCCTTAGCCAATGGGAAAAGACATT...TGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
CDS-3UTR TCA 90 bp TTCAGAACCCAAGGAAAACTAGCCCATCTTGACAGCTCTACTTTTGCGCCTGTTCATCTTTCCACTGAATaGCTTCATGGATCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: FRTQGKLAHLDSSTFAPVHLSTE*LHGSWP
Trigger: TGGCCACGATCCATGAAGTCATTCAGTGGAAAGATG...AACAGGCGCAAAAGTAGAGCTGTCAAGATGGGCTAGTTTTCCTTGGGTTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp AGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCTTCAGAACCCAAGGAAAACTCGTGCATCTTTCCACTaGATGACTTCATGGATCGTG +
Preference number: 4 (lower is better)
Translates to: SSGAKPLHIHFLQNPRKTRASFH*MTSWIV
Trigger: CACGATCCATGAAGTCATTCAGTGGAAAGATGCACG...AGTTTTCCTTGGGTTCTGAAGAAAATGGATGTGCAAAGGCTTGGCTCCGCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp ACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAACGTGCATCTTTCCACTaGATGACTTCATGGATCGTG +
Preference number: 4 (lower is better)
Translates to: TKVPLAQAKRGCRKLVHQRASFH*MTSWIV
Trigger: CACGATCCATGAAGTCATTCAGTGGAAAGATGCACG...TTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp GTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCACGTGCATCTTTCCACTaGATGACTTCATGGATCGTG +
Preference number: 4 (lower is better)
Translates to: VYQGPTCSGKKRLQKIGSRASFH*MTSWIV
Trigger: CACGATCCATGAAGTCATTCAGTGGAAAGATGCACG...TGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp TCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCGTTCATGTCCCGACTaGAAATGGGCTTCACGAAGG +
Preference number: 4 (lower is better)
Translates to: SHLLRQKEAAENWFINGIRSCPD*KWASRR
Trigger: CCTTCGTGAAGCCCATTTTCAGTCGGGACATGAACG...AATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp GTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCAAAAACTAGCCCATCTTaGCAGCTCTACTTTTGCGCC +
Preference number: 4 (lower is better)
Translates to: VYQGPTCSGKKRLQKIGSKTSPS*QLYFCA
Trigger: GGCGCAAAAGTAGAGCTGTCAAGATGGGCTAGTTTT...TGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp AGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCTTCAGAACCCAAGGAAAACTAAAACTAGCCCATCTTaGCAGCTCTACTTTTGCGCC +
Preference number: 4 (lower is better)
Translates to: SSGAKPLHIHFLQNPRKTKTSPS*QLYFCA
Trigger: GGCGCAAAAGTAGAGCTGTCAAGATGGGCTAGTTTT...AGTTTTCCTTGGGTTCTGAAGAAAATGGATGTGCAAAGGCTTGGCTCCGCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp ACCTGTGTTGATGTTTATTCTGCCACTGAGAGGTACACCAGGGTTTCCAAAGACAAAACTAGCCCATCTTaGCAGCTCTACTTTTGCGCC +
Preference number: 4 (lower is better)
Translates to: TCVDVYSATERYTRVSKDKTSPS*QLYFCA
Trigger: GGCGCAAAAGTAGAGCTGTCAAGATGGGCTAGTTTT...GTCTTTGGAAACCCTGGTGTACCTCTCAGTGGCAGAATAAACATCAACACAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp GTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATGTTTATTCTGCCACTaGGAGGTACACCAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: VYQGPTCSGKKRLQKIGSCLFCH*EVHQGF
Trigger: GAAACCCTGGTGTACCTCTCAGTGGCAGAATAAACA...TGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp ACCTGTGTTGATGTTTATTCTGCCACTGAGAGGTACACCAGGGTTTCCAAAGACTGTTTATTCTGCCACTaGGAGGTACACCAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: TCVDVYSATERYTRVSKDCLFCH*EVHQGF
Trigger: GAAACCCTGGTGTACCTCTCAGTGGCAGAATAAACA...GTCTTTGGAAACCCTGGTGTACCTCTCAGTGGCAGAATAAACATCAACACAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp ACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAATGTTTATTCTGCCACTaGGAGGTACACCAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: TKVPLAQAKRGCRKLVHQCLFCH*EVHQGF
Trigger: GAAACCCTGGTGTACCTCTCAGTGGCAGAATAAACA...TTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp AGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCTTCAGAACCCAAGGAAAACTTGTTTATTCTGCCACTaGGAGGTACACCAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: SSGAKPLHIHFLQNPRKTCLFCH*EVHQGF
Trigger: GAAACCCTGGTGTACCTCTCAGTGGCAGAATAAACA...AGTTTTCCTTGGGTTCTGAAGAAAATGGATGTGCAAAGGCTTGGCTCCGCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp TTCAGAACCCAAGGAAAACTAGCCCATCTTGACAGCTCTACTTTTGCGCCTGTTTGTTTATTCTGCCACTaGGAGGTACACCAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: FRTQGKLAHLDSSTFAPVCLFCH*EVHQGF
Trigger: GAAACCCTGGTGTACCTCTCAGTGGCAGAATAAACA...AACAGGCGCAAAAGTAGAGCTGTCAAGATGGGCTAGTTTTCCTTGGGTTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp ACCTGTGTTGATGTTTATTCTGCCACTGAGAGGTACACCAGGGTTTCCAAAGACGCGGAGCCAAGCCTTTaGACATCCATTTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: TCVDVYSATERYTRVSKDAEPSL*TSIFFR
Trigger: TCTGAAGAAAATGGATGTGCAAAGGCTTGGCTCCGC...GTCTTTGGAAACCCTGGTGTACCTCTCAGTGGCAGAATAAACATCAACACAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp AGGGGCTATAGAAACAACTACATTAACAAGTCGTCCAGCCTCATGCCCAATGTCGCGGAGCCAAGCCTTTaGACATCCATTTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: RGYRNNYINKSSSLMPNVAEPSL*TSIFFR
Trigger: TCTGAAGAAAATGGATGTGCAAAGGCTTGGCTCCGC...GACATTGGGCATGAGGCTGGACGACTTGTTAATGTAGTTGTTTCTATAGCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp AGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCTTCAGAACCCAAGGAAAACTGCGGAGCCAAGCCTTTaGACATCCATTTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: SSGAKPLHIHFLQNPRKTAEPSL*TSIFFR
Trigger: TCTGAAGAAAATGGATGTGCAAAGGCTTGGCTCCGC...AGTTTTCCTTGGGTTCTGAAGAAAATGGATGTGCAAAGGCTTGGCTCCGCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp TACATTAACAAGTCGTCCAGCCTCATGCCCAATGTCACAATTTTTGAACAGATGGCGAACGGTGGGTGCTaGGCATGCTCATCTACAGAA +
Preference number: 4 (lower is better)
Translates to: YINKSSSLMPNVTIFEQMANGGC*ACSSTE
Trigger: TTCTGTAGATGAGCATGCGCAGCACCCACCGTTCGC...CATCTGTTCAAAAATTGTGACATTGGGCATGAGGCTGGACGACTTGTTAATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
CDS-3UTR CCA 90 bp AGTCGTCCAGCCTCATGCCCAATGTCACAATTTTTGAACAGATGGCCTCCTTCCCTGGGGTCTGTGACATaGGCATTCTTCATAAACATT +
Preference number: 4 (lower is better)
Translates to: SRPASCPMSQFLNRWPPSLGSVT*AFFINI
Trigger: AATGTTTATGAAGAATGCCCATGTCACAGACCCCAG...GGAAGGAGGCCATCTGTTCAAAAATTGTGACATTGGGCATGAGGCTGGACGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp GGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAAGAAATCCTTTGGCCTTaGCGCTTCTGTTTCATGGAA +
Preference number: 4 (lower is better)
Translates to: GDVYTKVPLAQAKRGCRKEILWP*RFCFME
Trigger: TTCCATGAAACAGAAGCGCCAAGGCCAAAGGATTTC...TTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp TTTAAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCATTGGCCAACATAGAACTTaGATAGGAAATCCTTTGGCC +
Preference number: 4 (lower is better)
Translates to: FKGWSLLQVAEPSLCTSIGQHRT*IGNPLA
Trigger: GGCCAAAGGATTTCCTATCCAAGTTCTATGTTGGCC...AATGGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp GGAAAACTAGCCCATCTTGACAGCTCTACTTTTGCGCCTGTTAGTGCTGCCCTGTTTCATTTTAAGGGCTaGAGCTTGTTACAAGTAGCG +
Preference number: 4 (lower is better)
Translates to: GKLAHLDSSTFAPVSAALFHFKG*SLLQVA
Trigger: CGCTACTTGTAACAAGCTCCAGCCCTTAAAATGAAA...CAGGGCAGCACTAACAGGCGCAAAAGTAGAGCTGTCAAGATGGGCTAGTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp AAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCATTGGCTGAGCGAACGGTaGGTGCTGCGCATGCTCATC +
Preference number: 4 (lower is better)
Translates to: KEAAENWFINGILSQSDHWLSER*VLRMLI
Trigger: GATGAGCATGCGCAGCACCCACCGTTCGCTCAGCCA...ATGGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
CDS-3UTR CCA 90 bp AAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCTGGGAAGCCTCTCTCTaGCTGAGCGAACGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: KKRLQKIGSSMEFYHKVTWEASL*LSERWV
Trigger: CACCCACCGTTCGCTCAGCCAGAGAGAGGCTTCCCA...GGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
CDS-3UTR CCA 90 bp AGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCATTGTAGGCTCTCGGATTGGCTaGGAAGCCTCTCTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RLQKIGSSMEFYHKVTIVGSRIG*EASLWL
Trigger: CAGCCAGAGAGAGGCTTCCCAGCCAATCCGAGAGCC...TACAATGGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
3UTR CAA 72 bp GGGAAAGAACAGGTGATGTGTATACCAAGGTCCCACTaGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTC +
Preference number: 4 (lower is better)
Translates to: GKEQVMCIPRSH*LRQKEAAENWF
Trigger: GAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGTTCTTTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp CTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAACTGTTAGTGCTGCCCTaGTCCCTGACAGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: LRQKEAAENWFINGILSQLLVLP*SLTGRA
Trigger: AGCTCTTCCTGTCAGGGATCAGGGCAGCACTAACAG...TTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp AGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCATTGTACGCTCCCCGCCATCTTaGCAAAGCATCCACTCCACA +
Preference number: 4 (lower is better)
Translates to: RLQKIGSSMEFYHKVTIVRSPPS*QSIHST
Trigger: TGTGGAGTGGATGCTTTGGCAAGATGGCGGGGAGCG...TACAATGGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp GGAAAACTAGCCCATCTTGACAGCTCTACTTTTGCGCCTGTTAGTGCTGCCCTGTCCTGTTTACTGACATaGAAGGCTCTGAGAAAAATA +
Preference number: 4 (lower is better)
Translates to: GKLAHLDSSTFAPVSAALSCLLT*KALRKI
Trigger: TATTTTTCTCAGAGCCTTGCATGTCAGTAAACAGGA...CAGGGCAGCACTAACAGGCGCAAAAGTAGAGCTGTCAAGATGGGCTAGTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp AGGGGCTATAGAAACAACTACATTAACAAGTCGTCCAGCCTCATGCCCAATGTCAGTCGTCCAGCCTCATaGCCAATGTCACAATTTTTG +
Preference number: 4 (lower is better)
Translates to: RGYRNNYINKSSSLMPNVSRPAS*PMSQFL
Trigger: CAAAAATTGTGACATTGGGCATGAGGCTGGACGACT...GACATTGGGCATGAGGCTGGACGACTTGTTAATGTAGTTGTTTCTATAGCCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp GGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAACTGGGGTCTGTGACATaGGCATTCTTCATAAACATT +
Preference number: 4 (lower is better)
Translates to: GDVYTKVPLAQAKRGCRKLGSVT*AFFINI
Trigger: AATGTTTATGAAGAATGCCCATGTCACAGACCCCAG...TTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp TTTAAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCATTCTGGGGTCTGTGACATaGGCATTCTTCATAAACATT +
Preference number: 4 (lower is better)
Translates to: FKGWSLLQVAEPSLCTSILGSVT*AFFINI
Trigger: AATGTTTATGAAGAATGCCCATGTCACAGACCCCAG...AATGGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp GTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCAGGCGCTTCTGTTTCATaGAAGAACCGCATAACATGT +
Preference number: 4 (lower is better)
Translates to: VYQGPTCSGKKRLQKIGSGASVS*KNRITC
Trigger: ACATGTTATGCGGTTCTTCCATGAAACAGAAGCGCC...TGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp AGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCTTCAGAACCCAAGGAAAACTGAAATCCTTTGGCCTTaGCGCTTCTGTTTCATGGAA +
Preference number: 4 (lower is better)
Translates to: SSGAKPLHIHFLQNPRKTEILWP*RFCFME
Trigger: TTCCATGAAACAGAAGCGCCAAGGCCAAAGGATTTC...AGTTTTCCTTGGGTTCTGAAGAAAATGGATGTGCAAAGGCTTGGCTCCGCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp ACCTGTGTTGATGTTTATTCTGCCACTGAGAGGTACACCAGGGTTTCCAAAGACGAAATCCTTTGGCCTTaGCGCTTCTGTTTCATGGAA +
Preference number: 4 (lower is better)
Translates to: TCVDVYSATERYTRVSKDEILWP*RFCFME
Trigger: TTCCATGAAACAGAAGCGCCAAGGCCAAAGGATTTC...GTCTTTGGAAACCCTGGTGTACCTCTCAGTGGCAGAATAAACATCAACACAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp AGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCTTCAGAACCCAAGGAAAACTGGCCAACATAGAACTTaGATAGGAAATCCTTTGGCC +
Preference number: 4 (lower is better)
Translates to: SSGAKPLHIHFLQNPRKTGQHRT*IGNPLA
Trigger: GGCCAAAGGATTTCCTATCCAAGTTCTATGTTGGCC...AGTTTTCCTTGGGTTCTGAAGAAAATGGATGTGCAAAGGCTTGGCTCCGCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp TACATTAACAAGTCGTCCAGCCTCATGCCCAATGTCACAATTTTTGAACAGATGATGTCCAGCTGGAATTaGTGCACAGTGTTCGGCACC +
Preference number: 4 (lower is better)
Translates to: YINKSSSLMPNVTIFEQMMSSWN*CTVFGT
Trigger: GGTGCCGAACACTGTGCACCAATTCCAGCTGGACAT...CATCTGTTCAAAAATTGTGACATTGGGCATGAGGCTGGACGACTTGTTAATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp AGAACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCTTTCATTTTAAGGGCTaGAGCTTGTTACAAGTAGCG +
Preference number: 4 (lower is better)
Translates to: RTGDVYTKVPLAQAKRGCFHFKG*SLLQVA
Trigger: CGCTACTTGTAACAAGCTCCAGCCCTTAAAATGAAA...GCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp CATTTTAAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCTTTCATTTTAAGGGCTaGAGCTTGTTACAAGTAGCG +
Preference number: 4 (lower is better)
Translates to: HFKGWSLLQVAEPSLCTSFHFKG*SLLQVA
Trigger: CGCTACTTGTAACAAGCTCCAGCCCTTAAAATGAAA...GGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp CTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAACGTTCATGTCCCGACTaGAAATGGGCTTCACGAAGG +
Preference number: 4 (lower is better)
Translates to: LRQKEAAENWFINGILSQRSCPD*KWASRR
Trigger: CCTTCGTGAAGCCCATTTTCAGTCGGGACATGAACG...TTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp TCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTTGTTTATTCTGCCACTaGGAGGTACACCAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: SHLLRQKEAAENWFINGICLFCH*EVHQGF
Trigger: GAAACCCTGGTGTACCTCTCAGTGGCAGAATAAACA...AATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp GGAAAACTAGCCCATCTTGACAGCTCTACTTTTGCGCCTGTTAGTGCTGCCCTGATAACATGTGTCCGCTaGTTCCATACTTTAATTGTT +
Preference number: 4 (lower is better)
Translates to: GKLAHLDSSTFAPVSAALITCVR*FHTLIV
Trigger: AACAATTAAAGTATGGAAGCAGCGGACACATGTTAT...CAGGGCAGCACTAACAGGCGCAAAAGTAGAGCTGTCAAGATGGGCTAGTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp AAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCATTCCAGCTGGAATTGGTaGACAGTGTTCGGCACCTCC +
Preference number: 4 (lower is better)
Translates to: KEAAENWFINGILSQSDHSSWNW*TVFGTS
Trigger: GGAGGTGCCGAACACTGTGCACCAATTCCAGCTGGA...ATGGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp AGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCATTGTATCCAGCTGGAATTGGTaGACAGTGTTCGGCACCTCC +
Preference number: 4 (lower is better)
Translates to: RLQKIGSSMEFYHKVTIVSSWNW*TVFGTS
Trigger: GGAGGTGCCGAACACTGTGCACCAATTCCAGCTGGA...TACAATGGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp AGTCGTCCAGCCTCATGCCCAATGTCACAATTTTTGAACAGATGGCCTCCTTCCTCCTGTTTACTGACATaGAAGGCTCTGAGAAAAATA +
Preference number: 4 (lower is better)
Translates to: SRPASCPMSQFLNRWPPSSCLLT*KALRKI
Trigger: TATTTTTCTCAGAGCCTTGCATGTCAGTAAACAGGA...GGAAGGAGGCCATCTGTTCAAAAATTGTGACATTGGGCATGAGGCTGGACGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp CATTTTAAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCTCCTGTTTACTGACATaGAAGGCTCTGAGAAAAATA +
Preference number: 4 (lower is better)
Translates to: HFKGWSLLQVAEPSLCTSSCLLT*KALRKI
Trigger: TATTTTTCTCAGAGCCTTGCATGTCAGTAAACAGGA...GGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp AAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCGCGAACGGTGGGTGCTaGGCATGCTCATCTACAGAA +
Preference number: 4 (lower is better)
Translates to: KKRLQKIGSSMEFYHKVTANGGC*ACSSTE
Trigger: TTCTGTAGATGAGCATGCGCAGCACCCACCGTTCGC...GGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
CDS-3UTR CCA 90 bp GGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTTCATTTTAAGGGCTaGAGCTTGTTACAAGTAGCG +
Preference number: 4 (lower is better)
Translates to: GDVYTKVPLAQAKRGCRKFHFKG*SLLQVA
Trigger: CGCTACTTGTAACAAGCTCCAGCCCTTAAAATGAAA...TTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp TTTAAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCATTTTTCATTTTAAGGGCTaGAGCTTGTTACAAGTAGCG +
Preference number: 4 (lower is better)
Translates to: FKGWSLLQVAEPSLCTSIFHFKG*SLLQVA
Trigger: CGCTACTTGTAACAAGCTCCAGCCCTTAAAATGAAA...AATGGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp TACATTAACAAGTCGTCCAGCCTCATGCCCAATGTCACAATTTTTGAACAGATGCATCTTTCCACTGAATaGCTTCATGGATCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: YINKSSSLMPNVTIFEQMHLSTE*LHGSWP
Trigger: TGGCCACGATCCATGAAGTCATTCAGTGGAAAGATG...CATCTGTTCAAAAATTGTGACATTGGGCATGAGGCTGGACGACTTGTTAATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp TACATTAACAAGTCGTCCAGCCTCATGCCCAATGTCACAATTTTTGAACAGATGCGTGCATCTTTCCACTaGATGACTTCATGGATCGTG +
Preference number: 4 (lower is better)
Translates to: YINKSSSLMPNVTIFEQMRASFH*MTSWIV
Trigger: CACGATCCATGAAGTCATTCAGTGGAAAGATGCACG...CATCTGTTCAAAAATTGTGACATTGGGCATGAGGCTGGACGACTTGTTAATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp AGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCATTGTACGTTCATGTCCCGACTaGAAATGGGCTTCACGAAGG +
Preference number: 4 (lower is better)
Translates to: RLQKIGSSMEFYHKVTIVRSCPD*KWASRR
Trigger: CCTTCGTGAAGCCCATTTTCAGTCGGGACATGAACG...TACAATGGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp TACATTAACAAGTCGTCCAGCCTCATGCCCAATGTCACAATTTTTGAACAGATGAAAACTAGCCCATCTTaGCAGCTCTACTTTTGCGCC +
Preference number: 4 (lower is better)
Translates to: YINKSSSLMPNVTIFEQMKTSPS*QLYFCA
Trigger: GGCGCAAAAGTAGAGCTGTCAAGATGGGCTAGTTTT...CATCTGTTCAAAAATTGTGACATTGGGCATGAGGCTGGACGACTTGTTAATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp AGAACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCATAACATGTGTCCGCTaGTTCCATACTTTAATTGTT +
Preference number: 4 (lower is better)
Translates to: RTGDVYTKVPLAQAKRGCITCVR*FHTLIV
Trigger: AACAATTAAAGTATGGAAGCAGCGGACACATGTTAT...GCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp AAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCAAAATAGTATCAACGTaGATCTTTCCACTGAATGAC +
Preference number: 4 (lower is better)
Translates to: KGWSLLQVAEPSLCTSIFKIVST*IFPLND
Trigger: GTCATTCAGTGGAAAGATGCACGTTGATACTATTTT...GAAAATGGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp CATTTTAAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCAAAATAGTATCAACGTaGATCTTTCCACTGAATGAC +
Preference number: 4 (lower is better)
Translates to: HFKGWSLLQVAEPSLCTSKIVST*IFPLND
Trigger: GTCATTCAGTGGAAAGATGCACGTTGATACTATTTT...GGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp TACATTAACAAGTCGTCCAGCCTCATGCCCAATGTCACAATTTTTGAACAGATGGCGGAGCCAAGCCTTTaGACATCCATTTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: YINKSSSLMPNVTIFEQMAEPSL*TSIFFR
Trigger: TCTGAAGAAAATGGATGTGCAAAGGCTTGGCTCCGC...CATCTGTTCAAAAATTGTGACATTGGGCATGAGGCTGGACGACTTGTTAATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp TCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTGGCGCTTCTGTTTCATaGAAGAACCGCATAACATGT +
Preference number: 4 (lower is better)
Translates to: SHLLRQKEAAENWFINGIGASVS*KNRITC
Trigger: ACATGTTATGCGGTTCTTCCATGAAACAGAAGCGCC...AATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp AGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCATTGTAATGTCCAGCTGGAATTaGTGCACAGTGTTCGGCACC +
Preference number: 4 (lower is better)
Translates to: RLQKIGSSMEFYHKVTIVMSSWN*CTVFGT
Trigger: GGTGCCGAACACTGTGCACCAATTCCAGCTGGACAT...TACAATGGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp AAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCATATGTCCAGCTGGAATTaGTGCACAGTGTTCGGCACC +
Preference number: 4 (lower is better)
Translates to: KEAAENWFINGILSQSDHMSSWN*CTVFGT
Trigger: GGTGCCGAACACTGTGCACCAATTCCAGCTGGACAT...ATGGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp CTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAATGTCTTTTCCCATTaGCTAAGGAGGAACGCCCCG +
Preference number: 4 (lower is better)
Translates to: LRQKEAAENWFINGILSQNVFSH*LRRNAP
Trigger: CGGGGCGTTCCTCCTTAGCCAATGGGAAAAGACATT...TTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
CDS-3UTR GCA 90 bp GTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCCTGTTTACTGACATaGAAGGCTCTGAGAAAAATA +
Preference number: 4 (lower is better)
Translates to: VYQGPTCSGKKRLQKIGSSCLLT*KALRKI
Trigger: TATTTTTCTCAGAGCCTTGCATGTCAGTAAACAGGA...TGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp ACCTGTGTTGATGTTTATTCTGCCACTGAGAGGTACACCAGGGTTTCCAAAGACTCCTGTTTACTGACATaGAAGGCTCTGAGAAAAATA +
Preference number: 4 (lower is better)
Translates to: TCVDVYSATERYTRVSKDSCLLT*KALRKI
Trigger: TATTTTTCTCAGAGCCTTGCATGTCAGTAAACAGGA...GTCTTTGGAAACCCTGGTGTACCTCTCAGTGGCAGAATAAACATCAACACAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp TACATTAACAAGTCGTCCAGCCTCATGCCCAATGTCACAATTTTTGAACAGATGAGTCGTCCAGCCTCATaGCCAATGTCACAATTTTTG +
Preference number: 4 (lower is better)
Translates to: YINKSSSLMPNVTIFEQMSRPAS*PMSQFL
Trigger: CAAAAATTGTGACATTGGGCATGAGGCTGGACGACT...CATCTGTTCAAAAATTGTGACATTGGGCATGAGGCTGGACGACTTGTTAATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp CTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAGCGGAGCCAAGCCTTTaGACATCCATTTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: LRQKEAAENWFINGILSQAEPSL*TSIFFR
Trigger: TCTGAAGAAAATGGATGTGCAAAGGCTTGGCTCCGC...TTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp TACATTAACAAGTCGTCCAGCCTCATGCCCAATGTCACAATTTTTGAACAGATGGAAATCCTTTGGCCTTaGCGCTTCTGTTTCATGGAA +
Preference number: 4 (lower is better)
Translates to: YINKSSSLMPNVTIFEQMEILWP*RFCFME
Trigger: TTCCATGAAACAGAAGCGCCAAGGCCAAAGGATTTC...CATCTGTTCAAAAATTGTGACATTGGGCATGAGGCTGGACGACTTGTTAATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp TACATTAACAAGTCGTCCAGCCTCATGCCCAATGTCACAATTTTTGAACAGATGGGCCAACATAGAACTTaGATAGGAAATCCTTTGGCC +
Preference number: 4 (lower is better)
Translates to: YINKSSSLMPNVTIFEQMGQHRT*IGNPLA
Trigger: GGCCAAAGGATTTCCTATCCAAGTTCTATGTTGGCC...CATCTGTTCAAAAATTGTGACATTGGGCATGAGGCTGGACGACTTGTTAATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp AGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCATTGTACATCTTTCCACTGAATaGCTTCATGGATCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: RLQKIGSSMEFYHKVTIVHLSTE*LHGSWP
Trigger: TGGCCACGATCCATGAAGTCATTCAGTGGAAAGATG...TACAATGGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp AGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCATTGTACGTGCATCTTTCCACTaGATGACTTCATGGATCGTG +
Preference number: 4 (lower is better)
Translates to: RLQKIGSSMEFYHKVTIVRASFH*MTSWIV
Trigger: CACGATCCATGAAGTCATTCAGTGGAAAGATGCACG...TACAATGGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp AGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCATTGTAAAAACTAGCCCATCTTaGCAGCTCTACTTTTGCGCC +
Preference number: 4 (lower is better)
Translates to: RLQKIGSSMEFYHKVTIVKTSPS*QLYFCA
Trigger: GGCGCAAAAGTAGAGCTGTCAAGATGGGCTAGTTTT...TACAATGGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp AAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCAAAACTAGCCCATCTTaGCAGCTCTACTTTTGCGCC +
Preference number: 4 (lower is better)
Translates to: KKRLQKIGSSMEFYHKVTKTSPS*QLYFCA
Trigger: GGCGCAAAAGTAGAGCTGTCAAGATGGGCTAGTTTT...GGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR TCA 90 bp AGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCATTGTATGTTTATTCTGCCACTaGGAGGTACACCAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: RLQKIGSSMEFYHKVTIVCLFCH*EVHQGF
Trigger: GAAACCCTGGTGTACCTCTCAGTGGCAGAATAAACA...TACAATGGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp AGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCTTCAGAACCCAAGGAAAACTATAACATGTGTCCGCTaGTTCCATACTTTAATTGTT +
Preference number: 4 (lower is better)
Translates to: SSGAKPLHIHFLQNPRKTITCVR*FHTLIV
Trigger: AACAATTAAAGTATGGAAGCAGCGGACACATGTTAT...AGTTTTCCTTGGGTTCTGAAGAAAATGGATGTGCAAAGGCTTGGCTCCGCTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp ACCTGTGTTGATGTTTATTCTGCCACTGAGAGGTACACCAGGGTTTCCAAAGACAAAATAGTATCAACGTaGATCTTTCCACTGAATGAC +
Preference number: 4 (lower is better)
Translates to: TCVDVYSATERYTRVSKDKIVST*IFPLND
Trigger: GTCATTCAGTGGAAAGATGCACGTTGATACTATTTT...GTCTTTGGAAACCCTGGTGTACCTCTCAGTGGCAGAATAAACATCAACACAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp GTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCAAAAATAGTATCAACGTaGATCTTTCCACTGAATGAC +
Preference number: 4 (lower is better)
Translates to: VYQGPTCSGKKRLQKIGSKIVST*IFPLND
Trigger: GTCATTCAGTGGAAAGATGCACGTTGATACTATTTT...TGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp CTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTCGTCCAGCCTCATaGCCAATGTCACAATTTTTG +
Preference number: 4 (lower is better)
Translates to: LRQKEAAENWFINGILSQSRPAS*PMSQFL
Trigger: CAAAAATTGTGACATTGGGCATGAGGCTGGACGACT...TTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp AGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCATTGTAGCGGAGCCAAGCCTTTaGACATCCATTTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: RLQKIGSSMEFYHKVTIVAEPSL*TSIFFR
Trigger: TCTGAAGAAAATGGATGTGCAAAGGCTTGGCTCCGC...TACAATGGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp TACATTAACAAGTCGTCCAGCCTCATGCCCAATGTCACAATTTTTGAACAGATGCTGGGGTCTGTGACATaGGCATTCTTCATAAACATT +
Preference number: 4 (lower is better)
Translates to: YINKSSSLMPNVTIFEQMLGSVT*AFFINI
Trigger: AATGTTTATGAAGAATGCCCATGTCACAGACCCCAG...CATCTGTTCAAAAATTGTGACATTGGGCATGAGGCTGGACGACTTGTTAATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp CTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAGGCGCTTCTGTTTCATaGAAGAACCGCATAACATGT +
Preference number: 4 (lower is better)
Translates to: LRQKEAAENWFINGILSQGASVS*KNRITC
Trigger: ACATGTTATGCGGTTCTTCCATGAAACAGAAGCGCC...TTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp TCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCCTGACAGGAAGAGCTaGCTAATTTTAGATAATCTG +
Preference number: 4 (lower is better)
Translates to: SHLLRQKEAAENWFINGIPDRKS*LILDNL
Trigger: CAGATTATCTAAAATTAGCCAGCTCTTCCTGTCAGG...AATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp TCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTTCCTGTTTACTGACATaGAAGGCTCTGAGAAAAATA +
Preference number: 4 (lower is better)
Translates to: SHLLRQKEAAENWFINGISCLLT*KALRKI
Trigger: TATTTTTCTCAGAGCCTTGCATGTCAGTAAACAGGA...AATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp AAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCAGTCGTCCAGCCTCATaGCCAATGTCACAATTTTTG +
Preference number: 4 (lower is better)
Translates to: KKRLQKIGSSMEFYHKVTSRPAS*PMSQFL
Trigger: CAAAAATTGTGACATTGGGCATGAGGCTGGACGACT...GGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp AGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCATTGTAAGTCGTCCAGCCTCATaGCCAATGTCACAATTTTTG +
Preference number: 4 (lower is better)
Translates to: RLQKIGSSMEFYHKVTIVSRPAS*PMSQFL
Trigger: CAAAAATTGTGACATTGGGCATGAGGCTGGACGACT...TACAATGGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp AAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCATGGCGCTTCTGTTTCATaGAAGAACCGCATAACATGT +
Preference number: 4 (lower is better)
Translates to: KEAAENWFINGILSQSDHGASVS*KNRITC
Trigger: ACATGTTATGCGGTTCTTCCATGAAACAGAAGCGCC...ATGGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp AAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCGAAATCCTTTGGCCTTaGCGCTTCTGTTTCATGGAA +
Preference number: 4 (lower is better)
Translates to: KKRLQKIGSSMEFYHKVTEILWP*RFCFME
Trigger: TTCCATGAAACAGAAGCGCCAAGGCCAAAGGATTTC...GGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp AGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCATTGTAGGCCAACATAGAACTTaGATAGGAAATCCTTTGGCC +
Preference number: 4 (lower is better)
Translates to: RLQKIGSSMEFYHKVTIVGQHRT*IGNPLA
Trigger: GGCCAAAGGATTTCCTATCCAAGTTCTATGTTGGCC...TACAATGGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp TACATTAACAAGTCGTCCAGCCTCATGCCCAATGTCACAATTTTTGAACAGATGCCTGACAGGAAGAGCTaGCTAATTTTAGATAATCTG +
Preference number: 4 (lower is better)
Translates to: YINKSSSLMPNVTIFEQMPDRKS*LILDNL
Trigger: CAGATTATCTAAAATTAGCCAGCTCTTCCTGTCAGG...CATCTGTTCAAAAATTGTGACATTGGGCATGAGGCTGGACGACTTGTTAATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp TCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTAAAATAGTATCAACGTaGATCTTTCCACTGAATGAC +
Preference number: 4 (lower is better)
Translates to: SHLLRQKEAAENWFINGIKIVST*IFPLND
Trigger: GTCATTCAGTGGAAAGATGCACGTTGATACTATTTT...AATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp AGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCATTGTACTGGGGTCTGTGACATaGGCATTCTTCATAAACATT +
Preference number: 4 (lower is better)
Translates to: RLQKIGSSMEFYHKVTIVLGSVT*AFFINI
Trigger: AATGTTTATGAAGAATGCCCATGTCACAGACCCCAG...TACAATGGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp CTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAATTTCATTTTAAGGGCTaGAGCTTGTTACAAGTAGCG +
Preference number: 4 (lower is better)
Translates to: LRQKEAAENWFINGILSQFHFKG*SLLQVA
Trigger: CGCTACTTGTAACAAGCTCCAGCCCTTAAAATGAAA...TTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp TACATTAACAAGTCGTCCAGCCTCATGCCCAATGTCACAATTTTTGAACAGATGATAACATGTGTCCGCTaGTTCCATACTTTAATTGTT +
Preference number: 4 (lower is better)
Translates to: YINKSSSLMPNVTIFEQMITCVR*FHTLIV
Trigger: AACAATTAAAGTATGGAAGCAGCGGACACATGTTAT...CATCTGTTCAAAAATTGTGACATTGGGCATGAGGCTGGACGACTTGTTAATGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp AGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCATTGTACCTGACAGGAAGAGCTaGCTAATTTTAGATAATCTG +
Preference number: 4 (lower is better)
Translates to: RLQKIGSSMEFYHKVTIVPDRKS*LILDNL
Trigger: CAGATTATCTAAAATTAGCCAGCTCTTCCTGTCAGG...TACAATGGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp AAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCCCTGACAGGAAGAGCTaGCTAATTTTAGATAATCTG +
Preference number: 4 (lower is better)
Translates to: KKRLQKIGSSMEFYHKVTPDRKS*LILDNL
Trigger: CAGATTATCTAAAATTAGCCAGCTCTTCCTGTCAGG...GGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp AAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCATCCTGACAGGAAGAGCTaGCTAATTTTAGATAATCTG +
Preference number: 4 (lower is better)
Translates to: KEAAENWFINGILSQSDHPDRKS*LILDNL
Trigger: CAGATTATCTAAAATTAGCCAGCTCTTCCTGTCAGG...ATGGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp AAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCTTTCATTTTAAGGGCTaGAGCTTGTTACAAGTAGCG +
Preference number: 4 (lower is better)
Translates to: KKRLQKIGSSMEFYHKVTFHFKG*SLLQVA
Trigger: CGCTACTTGTAACAAGCTCCAGCCCTTAAAATGAAA...GGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CCA 90 bp AGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCATTGTATTTCATTTTAAGGGCTaGAGCTTGTTACAAGTAGCG +
Preference number: 4 (lower is better)
Translates to: RLQKIGSSMEFYHKVTIVFHFKG*SLLQVA
Trigger: CGCTACTTGTAACAAGCTCCAGCCCTTAAAATGAAA...TACAATGGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp CTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAATAACATGTGTCCGCTaGTTCCATACTTTAATTGTT +
Preference number: 4 (lower is better)
Translates to: LRQKEAAENWFINGILSQITCVR*FHTLIV
Trigger: AACAATTAAAGTATGGAAGCAGCGGACACATGTTAT...TTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp CTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAAAATAGTATCAACGTaGATCTTTCCACTGAATGAC +
Preference number: 4 (lower is better)
Translates to: LRQKEAAENWFINGILSQKIVST*IFPLND
Trigger: GTCATTCAGTGGAAAGATGCACGTTGATACTATTTT...TTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAG
37% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR GCA 90 bp AGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCATTGTATCCTGTTTACTGACATaGAAGGCTCTGAGAAAAATA +
Preference number: 4 (lower is better)
Translates to: RLQKIGSSMEFYHKVTIVSCLLT*KALRKI
Trigger: TATTTTTCTCAGAGCCTTGCATGTCAGTAAACAGGA...TACAATGGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS CCA 90 bp CCTGTATGCTGGGTGGGCGGGAGGATGACTCTGAGGCTCTCGGATTaGCTGGGAAGCCTCTCTCTGGCTGAGCGAACGGTGGGTGCTGCG +
Preference number: 5 (lower is better)
Translates to: PVCWVGGRMTLRLSD*LGSLSLAERTVGAA
Trigger: CGCAGCACCCACCGTTCGCTCAGCCAGAGAGAGGCTTCCCAGCCAATCCGAGAGCCTCAGAGTCATCCTCCCGCCCACCCAGCATACAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
CDS CCA 90 bp TTTGCAAGCAGCGCGTGCGGACCGCGGGCGAATGTCTTTTCCCATTaGCTAAGGAGGAACGCCCCGCCTGTATGCTGGGTGGGCGGGAGG +
Preference number: 5 (lower is better)
Translates to: FASSACGPRANVFSH*LRRNAPPVCWVGGR
Trigger: CCTCCCGCCCACCCAGCATACAGGCGGGGCGTTCCTCCTTAGCCAATGGGAAAAGACATTCGCCCGCGGTCCGCACGCGCTGCTTGCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
CDS GCA 90 bp GCGAATGTCTTTTCCCATTGGCTAAGGAGGAACGCCCCGCCTGTATaGTGGGTGGGCGGGAGGATGACTCTGAGGCTCTCGGATTGGCTG +
Preference number: 5 (lower is better)
Translates to: ANVFSHWLRRNAPPV*WVGGRMTLRLSDWL
Trigger: CAGCCAATCCGAGAGCCTCAGAGTCATCCTCCCGCCCACCCAGCATACAGGCGGGGCGTTCCTCCTTAGCCAATGGGAAAAGACATTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
CDS CCA 90 bp CGACTGAAAATGGGCTTCACGAAGGTGCTGGCGGTAGAAGTAGCTTaGCGGACGCCGCTCCCCGCCATCTTGCCAAAGCATCCACTCCAC +
Preference number: 5 (lower is better)
Translates to: RLKMGFTKVLAVEVA*RTPLPAILPKHPLH
Trigger: GTGGAGTGGATGCTTTGGCAAGATGGCGGGGAGCGGCGTCCGCCAAGCTACTTCTACCGCCAGCACCTTCGTGAAGCCCATTTTCAGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS CCA 90 bp AATGTCTTTTCCCATTGGCTAAGGAGGAACGCCCCGCCTGTATGCTaGGTGGGCGGGAGGATGACTCTGAGGCTCTCGGATTGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: NVFSHWLRRNAPPVC*VGGRMTLRLSDWLG
Trigger: TCCCAGCCAATCCGAGAGCCTCAGAGTCATCCTCCCGCCCACCCAGCATACAGGCGGGGCGTTCCTCCTTAGCCAATGGGAAAAGACATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
CDS-3UTR CAA 90 bp AGAACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCGGCGGTAGAAGTAGCTaGGCGGACGCCGCTCCCCGC +
Preference number: 5 (lower is better)
Translates to: RTGDVYTKVPLAQAKRGCGGRSS*ADAAPR
Trigger: GCGGGGAGCGGCGTCCGCCAAGCTACTTCTACCGCC...GCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp AAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCGGCGGTAGAAGTAGCTaGGCGGACGCCGCTCCCCGC +
Preference number: 5 (lower is better)
Translates to: KGWSLLQVAEPSLCTSIFGGRSS*ADAAPR
Trigger: GCGGGGAGCGGCGTCCGCCAAGCTACTTCTACCGCC...GAAAATGGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp CATTTTAAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCGGCGGTAGAAGTAGCTaGGCGGACGCCGCTCCCCGC +
Preference number: 5 (lower is better)
Translates to: HFKGWSLLQVAEPSLCTSGGRSS*ADAAPR
Trigger: GCGGGGAGCGGCGTCCGCCAAGCTACTTCTACCGCC...GGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp GGAAAACTAGCCCATCTTGACAGCTCTACTTTTGCGCCTGTTAGTGCTGCCCTGTCGCGCACCCTCCGCTaGGCCTCGTTCATGTCCCGA +
Preference number: 5 (lower is better)
Translates to: GKLAHLDSSTFAPVSAALSRTLR*ASFMSR
Trigger: TCGGGACATGAACGAGGCCAAGCGGAGGGTGCGCGA...CAGGGCAGCACTAACAGGCGCAAAAGTAGAGCTGTCAAGATGGGCTAGTTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp GGAAAACTAGCCCATCTTGACAGCTCTACTTTTGCGCCTGTTAGTGCTGCCCTGCCGCTCCCCGCCATCTaGCCAAAGCATCCACTCCAC +
Preference number: 5 (lower is better)
Translates to: GKLAHLDSSTFAPVSAALPLPAI*PKHPLH
Trigger: GTGGAGTGGATGCTTTGGCAAGATGGCGGGGAGCGG...CAGGGCAGCACTAACAGGCGCAAAAGTAGAGCTGTCAAGATGGGCTAGTTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp TTCAGAACCCAAGGAAAACTAGCCCATCTTGACAGCTCTACTTTTGCGCCTGTTGGCGGTAGAAGTAGCTaGGCGGACGCCGCTCCCCGC +
Preference number: 5 (lower is better)
Translates to: FRTQGKLAHLDSSTFAPVGGRSS*ADAAPR
Trigger: GCGGGGAGCGGCGTCCGCCAAGCTACTTCTACCGCC...AACAGGCGCAAAAGTAGAGCTGTCAAGATGGGCTAGTTTTCCTTGGGTTCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp AGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCTTCAGAACCCAAGGAAAACTGGCGGTAGAAGTAGCTaGGCGGACGCCGCTCCCCGC +
Preference number: 5 (lower is better)
Translates to: SSGAKPLHIHFLQNPRKTGGRSS*ADAAPR
Trigger: GCGGGGAGCGGCGTCCGCCAAGCTACTTCTACCGCC...AGTTTTCCTTGGGTTCTGAAGAAAATGGATGTGCAAAGGCTTGGCTCCGCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp AGGGGCTATAGAAACAACTACATTAACAAGTCGTCCAGCCTCATGCCCAATGTCGGCGGTAGAAGTAGCTaGGCGGACGCCGCTCCCCGC +
Preference number: 5 (lower is better)
Translates to: RGYRNNYINKSSSLMPNVGGRSS*ADAAPR
Trigger: GCGGGGAGCGGCGTCCGCCAAGCTACTTCTACCGCC...GACATTGGGCATGAGGCTGGACGACTTGTTAATGTAGTTGTTTCTATAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp CATTTTAAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCTCGCGCACCCTCCGCTaGGCCTCGTTCATGTCCCGA +
Preference number: 5 (lower is better)
Translates to: HFKGWSLLQVAEPSLCTSSRTLR*ASFMSR
Trigger: TCGGGACATGAACGAGGCCAAGCGGAGGGTGCGCGA...GGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp ACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGATCGCGCACCCTCCGCTaGGCCTCGTTCATGTCCCGA +
Preference number: 5 (lower is better)
Translates to: TGDVYTKVPLAQAKRGCRSRTLR*ASFMSR
Trigger: TCGGGACATGAACGAGGCCAAGCGGAGGGTGCGCGA...TCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp AGAACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCCACAACCCCACCCCTTaGCAAGCAGCGCGTGCGGAC +
Preference number: 5 (lower is better)
Translates to: RTGDVYTKVPLAQAKRGCHNPTP*QAARAD
Trigger: GTCCGCACGCGCTGCTTGCAAAGGGGTGGGGTTGTG...GCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
CDS-3UTR CAA 90 bp AGTCGTCCAGCCTCATGCCCAATGTCACAATTTTTGAACAGATGGCCTCCTTCCCACAACCCCACCCCTTaGCAAGCAGCGCGTGCGGAC +
Preference number: 5 (lower is better)
Translates to: SRPASCPMSQFLNRWPPSHNPTP*QAARAD
Trigger: GTCCGCACGCGCTGCTTGCAAAGGGGTGGGGTTGTG...GGAAGGAGGCCATCTGTTCAAAAATTGTGACATTGGGCATGAGGCTGGACGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
CDS-3UTR CAA 90 bp AGTCGTCCAGCCTCATGCCCAATGTCACAATTTTTGAACAGATGGCCTCCTTCCCCGCTCCCCGCCATCTaGCCAAAGCATCCACTCCAC +
Preference number: 5 (lower is better)
Translates to: SRPASCPMSQFLNRWPPSPLPAI*PKHPLH
Trigger: GTGGAGTGGATGCTTTGGCAAGATGGCGGGGAGCGG...GGAAGGAGGCCATCTGTTCAAAAATTGTGACATTGGGCATGAGGCTGGACGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp AGAACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCCCGCTCCCCGCCATCTaGCCAAAGCATCCACTCCAC +
Preference number: 5 (lower is better)
Translates to: RTGDVYTKVPLAQAKRGCPLPAI*PKHPLH
Trigger: GTGGAGTGGATGCTTTGGCAAGATGGCGGGGAGCGG...GCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp AAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCCCGCTCCCCGCCATCTaGCCAAAGCATCCACTCCAC +
Preference number: 5 (lower is better)
Translates to: KGWSLLQVAEPSLCTSIFPLPAI*PKHPLH
Trigger: GTGGAGTGGATGCTTTGGCAAGATGGCGGGGAGCGG...GAAAATGGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp TTTAAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCATTCACAACCCCACCCCTTaGCAAGCAGCGCGTGCGGAC +
Preference number: 5 (lower is better)
Translates to: FKGWSLLQVAEPSLCTSIHNPTP*QAARAD
Trigger: GTCCGCACGCGCTGCTTGCAAAGGGGTGGGGTTGTG...AATGGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
CDS-3UTR CAA 90 bp GGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAACCGCTCCCCGCCATCTaGCCAAAGCATCCACTCCAC +
Preference number: 5 (lower is better)
Translates to: GDVYTKVPLAQAKRGCRKPLPAI*PKHPLH
Trigger: GTGGAGTGGATGCTTTGGCAAGATGGCGGGGAGCGG...TTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp TTTAAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCATTCCGCTCCCCGCCATCTaGCCAAAGCATCCACTCCAC +
Preference number: 5 (lower is better)
Translates to: FKGWSLLQVAEPSLCTSIPLPAI*PKHPLH
Trigger: GTGGAGTGGATGCTTTGGCAAGATGGCGGGGAGCGG...AATGGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp TCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTGGCGGTAGAAGTAGCTaGGCGGACGCCGCTCCCCGC +
Preference number: 5 (lower is better)
Translates to: SHLLRQKEAAENWFINGIGGRSS*ADAAPR
Trigger: GCGGGGAGCGGCGTCCGCCAAGCTACTTCTACCGCC...AATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp GTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCGCGCACCCTCCGCTaGGCCTCGTTCATGTCCCGA +
Preference number: 5 (lower is better)
Translates to: VYQGPTCSGKKRLQKIGSSRTLR*ASFMSR
Trigger: TCGGGACATGAACGAGGCCAAGCGGAGGGTGCGCGA...TGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp ACCTGTGTTGATGTTTATTCTGCCACTGAGAGGTACACCAGGGTTTCCAAAGACTCGCGCACCCTCCGCTaGGCCTCGTTCATGTCCCGA +
Preference number: 5 (lower is better)
Translates to: TCVDVYSATERYTRVSKDSRTLR*ASFMSR
Trigger: TCGGGACATGAACGAGGCCAAGCGGAGGGTGCGCGA...GTCTTTGGAAACCCTGGTGTACCTCTCAGTGGCAGAATAAACATCAACACAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp ACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAATCGCGCACCCTCCGCTaGGCCTCGTTCATGTCCCGA +
Preference number: 5 (lower is better)
Translates to: TKVPLAQAKRGCRKLVHQSRTLR*ASFMSR
Trigger: TCGGGACATGAACGAGGCCAAGCGGAGGGTGCGCGA...TTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp TTCAGAACCCAAGGAAAACTAGCCCATCTTGACAGCTCTACTTTTGCGCCTGTTCCGCTCCCCGCCATCTaGCCAAAGCATCCACTCCAC +
Preference number: 5 (lower is better)
Translates to: FRTQGKLAHLDSSTFAPVPLPAI*PKHPLH
Trigger: GTGGAGTGGATGCTTTGGCAAGATGGCGGGGAGCGG...AACAGGCGCAAAAGTAGAGCTGTCAAGATGGGCTAGTTTTCCTTGGGTTCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp AGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCTTCAGAACCCAAGGAAAACTCCGCTCCCCGCCATCTaGCCAAAGCATCCACTCCAC +
Preference number: 5 (lower is better)
Translates to: SSGAKPLHIHFLQNPRKTPLPAI*PKHPLH
Trigger: GTGGAGTGGATGCTTTGGCAAGATGGCGGGGAGCGG...AGTTTTCCTTGGGTTCTGAAGAAAATGGATGTGCAAAGGCTTGGCTCCGCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp ACCTGTGTTGATGTTTATTCTGCCACTGAGAGGTACACCAGGGTTTCCAAAGACCCGCTCCCCGCCATCTaGCCAAAGCATCCACTCCAC +
Preference number: 5 (lower is better)
Translates to: TCVDVYSATERYTRVSKDPLPAI*PKHPLH
Trigger: GTGGAGTGGATGCTTTGGCAAGATGGCGGGGAGCGG...GTCTTTGGAAACCCTGGTGTACCTCTCAGTGGCAGAATAAACATCAACACAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp AGAACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCGATGTCCAGCTGGAATaGGTGCACAGTGTTCGGCAC +
Preference number: 5 (lower is better)
Translates to: RTGDVYTKVPLAQAKRGCDVQLE*VHSVRH
Trigger: GTGCCGAACACTGTGCACCAATTCCAGCTGGACATC...GCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp AAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCGATGTCCAGCTGGAATaGGTGCACAGTGTTCGGCAC +
Preference number: 5 (lower is better)
Translates to: KGWSLLQVAEPSLCTSIFDVQLE*VHSVRH
Trigger: GTGCCGAACACTGTGCACCAATTCCAGCTGGACATC...GAAAATGGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp ACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAGATGTCCAGCTGGAATaGGTGCACAGTGTTCGGCAC +
Preference number: 5 (lower is better)
Translates to: TGDVYTKVPLAQAKRGCRDVQLE*VHSVRH
Trigger: GTGCCGAACACTGTGCACCAATTCCAGCTGGACATC...TCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp AAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCGGCGGTAGAAGTAGCTaGGCGGACGCCGCTCCCCGC +
Preference number: 5 (lower is better)
Translates to: KKRLQKIGSSMEFYHKVTGGRSS*ADAAPR
Trigger: GCGGGGAGCGGCGTCCGCCAAGCTACTTCTACCGCC...GGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp TTTAAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCATTGATGTCCAGCTGGAATaGGTGCACAGTGTTCGGCAC +
Preference number: 5 (lower is better)
Translates to: FKGWSLLQVAEPSLCTSIDVQLE*VHSVRH
Trigger: GTGCCGAACACTGTGCACCAATTCCAGCTGGACATC...AATGGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp ACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGATTGACAGCTCTACTTTaGCGCCTGTTAGTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: TGDVYTKVPLAQAKRGCRLTALL*RLLVLP
Trigger: GGGCAGCACTAACAGGCGCAAAAGTAGAGCTGTCAA...TCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp ACCTGTGTTGATGTTTATTCTGCCACTGAGAGGTACACCAGGGTTTCCAAAGACTCTGAGGCTCTCGGATaGGCTGGGAAGCCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: TCVDVYSATERYTRVSKDSEALG*AGKPLS
Trigger: AGAGAGAGGCTTCCCAGCCAATCCGAGAGCCTCAGA...GTCTTTGGAAACCCTGGTGTACCTCTCAGTGGCAGAATAAACATCAACACAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
CDS-3UTR CAA 90 bp AGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCTTCAGAACCCAAGGAAAACTTCTGAGGCTCTCGGATaGGCTGGGAAGCCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: SSGAKPLHIHFLQNPRKTSEALG*AGKPLS
Trigger: AGAGAGAGGCTTCCCAGCCAATCCGAGAGCCTCAGA...AGTTTTCCTTGGGTTCTGAAGAAAATGGATGTGCAAAGGCTTGGCTCCGCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
CDS-3UTR CAA 90 bp AGGGGCTATAGAAACAACTACATTAACAAGTCGTCCAGCCTCATGCCCAATGTCTCTGAGGCTCTCGGATaGGCTGGGAAGCCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: RGYRNNYINKSSSLMPNVSEALG*AGKPLS
Trigger: AGAGAGAGGCTTCCCAGCCAATCCGAGAGCCTCAGA...GACATTGGGCATGAGGCTGGACGACTTGTTAATGTAGTTGTTTCTATAGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
CDS-3UTR CAA 90 bp AGTCGTCCAGCCTCATGCCCAATGTCACAATTTTTGAACAGATGGCCTCCTTCCGAATGTCTTTTCCCATaGGCTAAGGAGGAACGCCCC +
Preference number: 5 (lower is better)
Translates to: SRPASCPMSQFLNRWPPSECLFP*AKEERP
Trigger: GGGGCGTTCCTCCTTAGCCAATGGGAAAAGACATTC...GGAAGGAGGCCATCTGTTCAAAAATTGTGACATTGGGCATGAGGCTGGACGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
CDS-3UTR CAA 90 bp CATTTTAAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCGAATGTCTTTTCCCATaGGCTAAGGAGGAACGCCCC +
Preference number: 5 (lower is better)
Translates to: HFKGWSLLQVAEPSLCTSECLFP*AKEERP
Trigger: GGGGCGTTCCTCCTTAGCCAATGGGAAAAGACATTC...GGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
CDS-3UTR CAA 90 bp AAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCGGAAATCCTTTGGCCTaGGCGCTTCTGTTTCATGGA +
Preference number: 5 (lower is better)
Translates to: KGWSLLQVAEPSLCTSIFGNPLA*ALLFHG
Trigger: TCCATGAAACAGAAGCGCCAAGGCCAAAGGATTTCC...GAAAATGGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp AGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCTTCAGAACCCAAGGAAAACTGATGTCCAGCTGGAATaGGTGCACAGTGTTCGGCAC +
Preference number: 5 (lower is better)
Translates to: SSGAKPLHIHFLQNPRKTDVQLE*VHSVRH
Trigger: GTGCCGAACACTGTGCACCAATTCCAGCTGGACATC...AGTTTTCCTTGGGTTCTGAAGAAAATGGATGTGCAAAGGCTTGGCTCCGCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp TTCAGAACCCAAGGAAAACTAGCCCATCTTGACAGCTCTACTTTTGCGCCTGTTGATGTCCAGCTGGAATaGGTGCACAGTGTTCGGCAC +
Preference number: 5 (lower is better)
Translates to: FRTQGKLAHLDSSTFAPVDVQLE*VHSVRH
Trigger: GTGCCGAACACTGTGCACCAATTCCAGCTGGACATC...AACAGGCGCAAAAGTAGAGCTGTCAAGATGGGCTAGTTTTCCTTGGGTTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp AGGGGCTATAGAAACAACTACATTAACAAGTCGTCCAGCCTCATGCCCAATGTCGATGTCCAGCTGGAATaGGTGCACAGTGTTCGGCAC +
Preference number: 5 (lower is better)
Translates to: RGYRNNYINKSSSLMPNVDVQLE*VHSVRH
Trigger: GTGCCGAACACTGTGCACCAATTCCAGCTGGACATC...GACATTGGGCATGAGGCTGGACGACTTGTTAATGTAGTTGTTTCTATAGCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp ACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAAGATGTCCAGCTGGAATaGGTGCACAGTGTTCGGCAC +
Preference number: 5 (lower is better)
Translates to: TKVPLAQAKRGCRKLVHQDVQLE*VHSVRH
Trigger: GTGCCGAACACTGTGCACCAATTCCAGCTGGACATC...TTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp AGAACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCATACCAAGGTCCCACTaGCTCAGGCAAAAAGAGGCT +
Preference number: 5 (lower is better)
Translates to: RTGDVYTKVPLAQAKRGCIPRSH*LRQKEA
Trigger: AGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTAT...GCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp ACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAATACCAAGGTCCCACTaGCTCAGGCAAAAAGAGGCT +
Preference number: 5 (lower is better)
Translates to: TGDVYTKVPLAQAKRGCRIPRSH*LRQKEA
Trigger: AGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTAT...TCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp AAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCAGCGGAGCCAAGCCTTaGCACATCCATTTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: KGWSLLQVAEPSLCTSIFSGAKP*HIHFLQ
Trigger: CTGAAGAAAATGGATGTGCAAAGGCTTGGCTCCGCT...GAAAATGGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp ACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAGCGGAGCCAAGCCTTaGCACATCCATTTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: TGDVYTKVPLAQAKRGCRSGAKP*HIHFLQ
Trigger: CTGAAGAAAATGGATGTGCAAAGGCTTGGCTCCGCT...TCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp ACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGATTTAAGGGCTGGAGCTaGTTACAAGTAGCGGAGCCA +
Preference number: 5 (lower is better)
Translates to: TGDVYTKVPLAQAKRGCRFKGWS*LQVAEP
Trigger: TGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAA...TCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp AGTCGTCCAGCCTCATGCCCAATGTCACAATTTTTGAACAGATGGCCTCCTTCCTGGATAGGAAATCCTTaGGCCTTGGCGCTTCTGTTT +
Preference number: 5 (lower is better)
Translates to: SRPASCPMSQFLNRWPPSWIGNP*ALALLF
Trigger: AAACAGAAGCGCCAAGGCCAAAGGATTTCCTATCCA...GGAAGGAGGCCATCTGTTCAAAAATTGTGACATTGGGCATGAGGCTGGACGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp AGAACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCTGGATAGGAAATCCTTaGGCCTTGGCGCTTCTGTTT +
Preference number: 5 (lower is better)
Translates to: RTGDVYTKVPLAQAKRGCWIGNP*ALALLF
Trigger: AAACAGAAGCGCCAAGGCCAAAGGATTTCCTATCCA...GCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp AAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCTGGATAGGAAATCCTTaGGCCTTGGCGCTTCTGTTT +
Preference number: 5 (lower is better)
Translates to: KGWSLLQVAEPSLCTSIFWIGNP*ALALLF
Trigger: AAACAGAAGCGCCAAGGCCAAAGGATTTCCTATCCA...GAAAATGGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp AAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCATTCGCGCACCCTCCGCTaGGCCTCGTTCATGTCCCGA +
Preference number: 5 (lower is better)
Translates to: KEAAENWFINGILSQSDHSRTLR*ASFMSR
Trigger: TCGGGACATGAACGAGGCCAAGCGGAGGGTGCGCGA...ATGGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp ACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAATTGACAGCTCTACTTTaGCGCCTGTTAGTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: TKVPLAQAKRGCRKLVHQLTALL*RLLVLP
Trigger: GGGCAGCACTAACAGGCGCAAAAGTAGAGCTGTCAA...TTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp ACCTGTGTTGATGTTTATTCTGCCACTGAGAGGTACACCAGGGTTTCCAAAGACTTGACAGCTCTACTTTaGCGCCTGTTAGTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: TCVDVYSATERYTRVSKDLTALL*RLLVLP
Trigger: GGGCAGCACTAACAGGCGCAAAAGTAGAGCTGTCAA...GTCTTTGGAAACCCTGGTGTACCTCTCAGTGGCAGAATAAACATCAACACAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp GTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATTGACAGCTCTACTTTaGCGCCTGTTAGTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: VYQGPTCSGKKRLQKIGSLTALL*RLLVLP
Trigger: GGGCAGCACTAACAGGCGCAAAAGTAGAGCTGTCAA...TGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp TTTAAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCATTAGCGGAGCCAAGCCTTaGCACATCCATTTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: FKGWSLLQVAEPSLCTSISGAKP*HIHFLQ
Trigger: CTGAAGAAAATGGATGTGCAAAGGCTTGGCTCCGCT...AATGGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp GGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTTAAGGGCTGGAGCTaGTTACAAGTAGCGGAGCCA +
Preference number: 5 (lower is better)
Translates to: GDVYTKVPLAQAKRGCRKFKGWS*LQVAEP
Trigger: TGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAA...TTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp AGGGGCTATAGAAACAACTACATTAACAAGTCGTCCAGCCTCATGCCCAATGTCGGAAATCCTTTGGCCTaGGCGCTTCTGTTTCATGGA +
Preference number: 5 (lower is better)
Translates to: RGYRNNYINKSSSLMPNVGNPLA*ALLFHG
Trigger: TCCATGAAACAGAAGCGCCAAGGCCAAAGGATTTCC...GACATTGGGCATGAGGCTGGACGACTTGTTAATGTAGTTGTTTCTATAGCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp ACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAAGGAAATCCTTTGGCCTaGGCGCTTCTGTTTCATGGA +
Preference number: 5 (lower is better)
Translates to: TKVPLAQAKRGCRKLVHQGNPLA*ALLFHG
Trigger: TCCATGAAACAGAAGCGCCAAGGCCAAAGGATTTCC...TTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp AGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCTTCAGAACCCAAGGAAAACTGGAAATCCTTTGGCCTaGGCGCTTCTGTTTCATGGA +
Preference number: 5 (lower is better)
Translates to: SSGAKPLHIHFLQNPRKTGNPLA*ALLFHG
Trigger: TCCATGAAACAGAAGCGCCAAGGCCAAAGGATTTCC...AGTTTTCCTTGGGTTCTGAAGAAAATGGATGTGCAAAGGCTTGGCTCCGCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp GGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATGGATAGGAAATCCTTaGGCCTTGGCGCTTCTGTTT +
Preference number: 5 (lower is better)
Translates to: GDVYTKVPLAQAKRGCRKWIGNP*ALALLF
Trigger: AAACAGAAGCGCCAAGGCCAAAGGATTTCCTATCCA...TTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp TTTAAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCATTTGGATAGGAAATCCTTaGGCCTTGGCGCTTCTGTTT +
Preference number: 5 (lower is better)
Translates to: FKGWSLLQVAEPSLCTSIWIGNP*ALALLF
Trigger: AAACAGAAGCGCCAAGGCCAAAGGATTTCCTATCCA...AATGGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp TTCAGAACCCAAGGAAAACTAGCCCATCTTGACAGCTCTACTTTTGCGCCTGTTATACCAAGGTCCCACTaGCTCAGGCAAAAAGAGGCT +
Preference number: 5 (lower is better)
Translates to: FRTQGKLAHLDSSTFAPVIPRSH*LRQKEA
Trigger: AGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTAT...AACAGGCGCAAAAGTAGAGCTGTCAAGATGGGCTAGTTTTCCTTGGGTTCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp ACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAAATACCAAGGTCCCACTaGCTCAGGCAAAAAGAGGCT +
Preference number: 5 (lower is better)
Translates to: TKVPLAQAKRGCRKLVHQIPRSH*LRQKEA
Trigger: AGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTAT...TTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp ACAGGTGATGTGTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGACCAATGTCACAATTTTaGAACAGATGGCCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: TGDVYTKVPLAQAKRGCRPMSQF*NRWPPS
Trigger: GGAAGGAGGCCATCTGTTCAAAAATTGTGACATTGG...TCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATACACATCACCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp AGTCGTCCAGCCTCATGCCCAATGTCACAATTTTTGAACAGATGGCCTCCTTCCCCAATGTCACAATTTTaGAACAGATGGCCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: SRPASCPMSQFLNRWPPSPMSQF*NRWPPS
Trigger: GGAAGGAGGCCATCTGTTCAAAAATTGTGACATTGG...GGAAGGAGGCCATCTGTTCAAAAATTGTGACATTGGGCATGAGGCTGGACGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp CATTTTAAGGGCTGGAGCTTGTTACAAGTAGCGGAGCCAAGCCTTTGCACATCCCCAATGTCACAATTTTaGAACAGATGGCCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: HFKGWSLLQVAEPSLCTSPMSQF*NRWPPS
Trigger: GGAAGGAGGCCATCTGTTCAAAAATTGTGACATTGG...GGATGTGCAAAGGCTTGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp AGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCTTCAGAACCCAAGGAAAACTAGCGGAGCCAAGCCTTaGCACATCCATTTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: SSGAKPLHIHFLQNPRKTSGAKP*HIHFLQ
Trigger: CTGAAGAAAATGGATGTGCAAAGGCTTGGCTCCGCT...AGTTTTCCTTGGGTTCTGAAGAAAATGGATGTGCAAAGGCTTGGCTCCGCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp GTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATTTAAGGGCTGGAGCTaGTTACAAGTAGCGGAGCCA +
Preference number: 5 (lower is better)
Translates to: VYQGPTCSGKKRLQKIGSFKGWS*LQVAEP
Trigger: TGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAA...TGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp TTCAGAACCCAAGGAAAACTAGCCCATCTTGACAGCTCTACTTTTGCGCCTGTTTTTAAGGGCTGGAGCTaGTTACAAGTAGCGGAGCCA +
Preference number: 5 (lower is better)
Translates to: FRTQGKLAHLDSSTFAPVFKGWS*LQVAEP
Trigger: TGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAA...AACAGGCGCAAAAGTAGAGCTGTCAAGATGGGCTAGTTTTCCTTGGGTTCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp GGAAAACTAGCCCATCTTGACAGCTCTACTTTTGCGCCTGTTAGTGCTGCCCTGTGTTCTCTGTGTATATaGAACAGCTGTGCACCTAAG +
Preference number: 5 (lower is better)
Translates to: GKLAHLDSSTFAPVSAALCSLCI*NSCAPK
Trigger: CTTAGGTGCACAGCTGTTCAATATACACAGAGAACA...CAGGGCAGCACTAACAGGCGCAAAAGTAGAGCTGTCAAGATGGGCTAGTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp TCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTTTGACAGCTCTACTTTaGCGCCTGTTAGTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: SHLLRQKEAAENWFINGILTALL*RLLVLP
Trigger: GGGCAGCACTAACAGGCGCAAAAGTAGAGCTGTCAA...AATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp AGTCGTCCAGCCTCATGCCCAATGTCACAATTTTTGAACAGATGGCCTCCTTCCTGTTCTCTGTGTATATaGAACAGCTGTGCACCTAAG +
Preference number: 5 (lower is better)
Translates to: SRPASCPMSQFLNRWPPSCSLCI*NSCAPK
Trigger: CTTAGGTGCACAGCTGTTCAATATACACAGAGAACA...GGAAGGAGGCCATCTGTTCAAAAATTGTGACATTGGGCATGAGGCTGGACGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp TCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTGAATGTCTTTTCCCATaGGCTAAGGAGGAACGCCCC +
Preference number: 5 (lower is better)
Translates to: SHLLRQKEAAENWFINGIECLFP*AKEERP
Trigger: GGGGCGTTCCTCCTTAGCCAATGGGAAAAGACATTC...AATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
CDS CCA 90 bp TTTCCCTTAATGACCAGAAGATCAACCACCCTGGGGTCTGTGACATaGGCATTCTTCATAAACATTTCTCGGACTTTATCCCGTCCCATT +
Preference number: 5 (lower is better)
Translates to: FPLMTRRSTTLGSVT*AFFINISRTLSRPI
Trigger: AATGGGACGGGATAAAGTCCGAGAAATGTTTATGAAGAATGCCCATGTCACAGACCCCAGGGTGGTTGATCTTCTGGTCATTAAGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000470753.1
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000607132.1
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628004.1
ENST00000628198.1
ENST00000628740.2
ENST00000630201.4
ENST00000630511.1
ENST00000630971.2
CDS-3UTR CAA 90 bp TCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTGGAAATCCTTTGGCCTaGGCGCTTCTGTTTCATGGA +
Preference number: 5 (lower is better)
Translates to: SHLLRQKEAAENWFINGIGNPLA*ALLFHG
Trigger: TCCATGAAACAGAAGCGCCAAGGCCAAAGGATTTCC...AATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp AGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCTTCAGAACCCAAGGAAAACTCCAATGTCACAATTTTaGAACAGATGGCCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: SSGAKPLHIHFLQNPRKTPMSQF*NRWPPS
Trigger: GGAAGGAGGCCATCTGTTCAAAAATTGTGACATTGG...AGTTTTCCTTGGGTTCTGAAGAAAATGGATGTGCAAAGGCTTGGCTCCGCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp TTCAGAACCCAAGGAAAACTAGCCCATCTTGACAGCTCTACTTTTGCGCCTGTTCCAATGTCACAATTTTaGAACAGATGGCCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: FRTQGKLAHLDSSTFAPVPMSQF*NRWPPS
Trigger: GGAAGGAGGCCATCTGTTCAAAAATTGTGACATTGG...AACAGGCGCAAAAGTAGAGCTGTCAAGATGGGCTAGTTTTCCTTGGGTTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp TACATTAACAAGTCGTCCAGCCTCATGCCCAATGTCACAATTTTTGAACAGATGTTGACAGCTCTACTTTaGCGCCTGTTAGTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: YINKSSSLMPNVTIFEQMLTALL*RLLVLP
Trigger: GGGCAGCACTAACAGGCGCAAAAGTAGAGCTGTCAA...CATCTGTTCAAAAATTGTGACATTGGGCATGAGGCTGGACGACTTGTTAATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp TCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTAGCGGAGCCAAGCCTTaGCACATCCATTTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: SHLLRQKEAAENWFINGISGAKP*HIHFLQ
Trigger: CTGAAGAAAATGGATGTGCAAAGGCTTGGCTCCGCT...AATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp AGTAGCGGAGCCAAGCCTTTGCACATCCATTTTCTTCAGAACCCAAGGAAAACTTGTTCTCTGTGTATATaGAACAGCTGTGCACCTAAG +
Preference number: 5 (lower is better)
Translates to: SSGAKPLHIHFLQNPRKTCSLCI*NSCAPK
Trigger: CTTAGGTGCACAGCTGTTCAATATACACAGAGAACA...AGTTTTCCTTGGGTTCTGAAGAAAATGGATGTGCAAAGGCTTGGCTCCGCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp TTCAGAACCCAAGGAAAACTAGCCCATCTTGACAGCTCTACTTTTGCGCCTGTTTGTTCTCTGTGTATATaGAACAGCTGTGCACCTAAG +
Preference number: 5 (lower is better)
Translates to: FRTQGKLAHLDSSTFAPVCSLCI*NSCAPK
Trigger: CTTAGGTGCACAGCTGTTCAATATACACAGAGAACA...AACAGGCGCAAAAGTAGAGCTGTCAAGATGGGCTAGTTTTCCTTGGGTTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp GTATACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATGTTCTCTGTGTATATaGAACAGCTGTGCACCTAAG +
Preference number: 5 (lower is better)
Translates to: VYQGPTCSGKKRLQKIGSCSLCI*NSCAPK
Trigger: CTTAGGTGCACAGCTGTTCAATATACACAGAGAACA...TGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp ACCAAGGTCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAATGTTCTCTGTGTATATaGAACAGCTGTGCACCTAAG +
Preference number: 5 (lower is better)
Translates to: TKVPLAQAKRGCRKLVHQCSLCI*NSCAPK
Trigger: CTTAGGTGCACAGCTGTTCAATATACACAGAGAACA...TTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS GCA 90 bp CTTGGCGCTTCTGTTTCATGGAAGAACCGCATAACATGTGTCCGCTaGTTCCATACTTTAATTGTTTCTTCCAGTTCGATCTTTCCCTTA +
Preference number: 5 (lower is better)
Translates to: LGASVSWKNRITCVR*FHTLIVSSSSIFPL
Trigger: TAAGGGAAAGATCGAACTGGAAGAAACAATTAAAGTATGGAAGCAGCGGACACATGTTATGCGGTTCTTCCATGAAACAGAAGCGCCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000470753.1
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000607132.1
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628004.1
ENST00000628198.1
ENST00000628740.2
ENST00000630201.4
ENST00000630511.1
ENST00000630971.2
CDS-3UTR CAA 90 bp TACATTAACAAGTCGTCCAGCCTCATGCCCAATGTCACAATTTTTGAACAGATGTGGATAGGAAATCCTTaGGCCTTGGCGCTTCTGTTT +
Preference number: 5 (lower is better)
Translates to: YINKSSSLMPNVTIFEQMWIGNP*ALALLF
Trigger: AAACAGAAGCGCCAAGGCCAAAGGATTTCCTATCCA...CATCTGTTCAAAAATTGTGACATTGGGCATGAGGCTGGACGACTTGTTAATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp AGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCATTGTATTGACAGCTCTACTTTaGCGCCTGTTAGTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: RLQKIGSSMEFYHKVTIVLTALL*RLLVLP
Trigger: GGGCAGCACTAACAGGCGCAAAAGTAGAGCTGTCAA...TACAATGGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp CTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGCGGAGCCAAGCCTTaGCACATCCATTTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: LRQKEAAENWFINGILSQSGAKP*HIHFLQ
Trigger: CTGAAGAAAATGGATGTGCAAAGGCTTGGCTCCGCT...TTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp AAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCATGAATGTCTTTTCCCATaGGCTAAGGAGGAACGCCCC +
Preference number: 5 (lower is better)
Translates to: KEAAENWFINGILSQSDHECLFP*AKEERP
Trigger: GGGGCGTTCCTCCTTAGCCAATGGGAAAAGACATTC...ATGGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
CDS-3UTR CAA 90 bp CTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAATGGATAGGAAATCCTTaGGCCTTGGCGCTTCTGTTT +
Preference number: 5 (lower is better)
Translates to: LRQKEAAENWFINGILSQWIGNP*ALALLF
Trigger: AAACAGAAGCGCCAAGGCCAAAGGATTTCCTATCCA...TTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp AAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCATATACCAAGGTCCCACTaGCTCAGGCAAAAAGAGGCT +
Preference number: 5 (lower is better)
Translates to: KEAAENWFINGILSQSDHIPRSH*LRQKEA
Trigger: AGCCTCTTTTTGCCTGAGCAAGTGGGACCTTGGTAT...ATGGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp AGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCATTGTATTTAAGGGCTGGAGCTaGTTACAAGTAGCGGAGCCA +
Preference number: 5 (lower is better)
Translates to: RLQKIGSSMEFYHKVTIVFKGWS*LQVAEP
Trigger: TGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAA...TACAATGGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp AAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCATTTTAAGGGCTGGAGCTaGTTACAAGTAGCGGAGCCA +
Preference number: 5 (lower is better)
Translates to: KEAAENWFINGILSQSDHFKGWS*LQVAEP
Trigger: TGGCTCCGCTACTTGTAACAAGCTCCAGCCCTTAAA...ATGGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp TCCCACTTGCTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTTGTTCTCTGTGTATATaGAACAGCTGTGCACCTAAG +
Preference number: 5 (lower is better)
Translates to: SHLLRQKEAAENWFINGICSLCI*NSCAPK
Trigger: CTTAGGTGCACAGCTGTTCAATATACACAGAGAACA...AATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAGCAAGTGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp AGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCATTGTATGGATAGGAAATCCTTaGGCCTTGGCGCTTCTGTTT +
Preference number: 5 (lower is better)
Translates to: RLQKIGSSMEFYHKVTIVWIGNP*ALALLF
Trigger: AAACAGAAGCGCCAAGGCCAAAGGATTTCCTATCCA...TACAATGGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp CTCAGGCAAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAACCAATGTCACAATTTTaGAACAGATGGCCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: LRQKEAAENWFINGILSQPMSQF*NRWPPS
Trigger: GGAAGGAGGCCATCTGTTCAAAAATTGTGACATTGG...TTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTTGCCTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp TACATTAACAAGTCGTCCAGCCTCATGCCCAATGTCACAATTTTTGAACAGATGTGTTCTCTGTGTATATaGAACAGCTGTGCACCTAAG +
Preference number: 5 (lower is better)
Translates to: YINKSSSLMPNVTIFEQMCSLCI*NSCAPK
Trigger: CTTAGGTGCACAGCTGTTCAATATACACAGAGAACA...CATCTGTTCAAAAATTGTGACATTGGGCATGAGGCTGGACGACTTGTTAATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp AAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCCCAATGTCACAATTTTaGAACAGATGGCCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: KKRLQKIGSSMEFYHKVTPMSQF*NRWPPS
Trigger: GGAAGGAGGCCATCTGTTCAAAAATTGTGACATTGG...GGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp AAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCATCCAATGTCACAATTTTaGAACAGATGGCCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: KEAAENWFINGILSQSDHPMSQF*NRWPPS
Trigger: GGAAGGAGGCCATCTGTTCAAAAATTGTGACATTGG...ATGGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS-3UTR CAA 90 bp AAAAAGAGGCTGCAGAAAATTGGTTCATCAATGGAATTCTATCACAAAGTGACCTGTTCTCTGTGTATATaGAACAGCTGTGCACCTAAG +
Preference number: 5 (lower is better)
Translates to: KKRLQKIGSSMEFYHKVTCSLCI*NSCAPK
Trigger: CTTAGGTGCACAGCTGTTCAATATACACAGAGAACA...GGTCACTTTGTGATAGAATTCCATTGATGAACCAATTTTCTGCAGCCTCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS CAA 90 bp CTTTGCAAGCAGCGCGTGCGGACCGCGGGCGAATGTCTTTTCCCATaGGCTAAGGAGGAACGCCCCGCCTGTATGCTGGGTGGGCGGGAG +
Preference number: 6 (lower is better)
Translates to: LCKQRVRTAGECLFP*AKEERPACMLGGRE
Trigger: CTCCCGCCCACCCAGCATACAGGCGGGGCGTTCCTCCTTAGCCAATGGGAAAAGACATTCGCCCGCGGTCCGCACGCGCTGCTTGCAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
CDS CCA 72 bp TGGGTGGGCGGGAGGATGACTCTGAGGCTCTCGGATTaGCTGGGAAGCCTCTCTCTGGCTGAGCGAACGGTG +
Preference number: 6 (lower is better)
Translates to: WVGGRMTLRLSD*LGSLSLAERTV
Trigger: CACCGTTCGCTCAGCCAGAGAGAGGCTTCCCAGCCAATCCGAGAGCCTCAGAGTCATCCTCCCGCCCACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
CDS CCA 72 bp AGCGCGTGCGGACCGCGGGCGAATGTCTTTTCCCATTaGCTAAGGAGGAACGCCCCGCCTGTATGCTGGGTG +
Preference number: 6 (lower is better)
Translates to: SACGPRANVFSH*LRRNAPPVCWV
Trigger: CACCCAGCATACAGGCGGGGCGTTCCTCCTTAGCCAATGGGAAAAGACATTCGCCCGCGGTCCGCACGCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
CDS CAA 72 bp CAGCGCGTGCGGACCGCGGGCGAATGTCTTTTCCCATaGGCTAAGGAGGAACGCCCCGCCTGTATGCTGGGT +
Preference number: 6 (lower is better)
Translates to: QRVRTAGECLFP*AKEERPACMLG
Trigger: ACCCAGCATACAGGCGGGGCGTTCCTCCTTAGCCAATGGGAAAAGACATTCGCCCGCGGTCCGCACGCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
CDS CCA 72 bp TCCCATTGGCTAAGGAGGAACGCCCCGCCTGTATGCTaGGTGGGCGGGAGGATGACTCTGAGGCTCTCGGAT +
Preference number: 6 (lower is better)
Translates to: SHWLRRNAPPVC*VGGRMTLRLSD
Trigger: ATCCGAGAGCCTCAGAGTCATCCTCCCGCCCACCCAGCATACAGGCGGGGCGTTCCTCCTTAGCCAATGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
CDS TCA 72 bp GAGGCTCTCGGATTGGCTGGGAAGCCTCTCTCTGGCTaGGCGAACGGTGGGTGCTGCGCATGCTCATCTACA +
Preference number: 6 (lower is better)
Translates to: EALGLAGKPLSG*ANGGCCACSST
Trigger: TGTAGATGAGCATGCGCAGCACCCACCGTTCGCTCAGCCAGAGAGAGGCTTCCCAGCCAATCCGAGAGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
CDS GCA 72 bp TTTTCCCATTGGCTAAGGAGGAACGCCCCGCCTGTATaGTGGGTGGGCGGGAGGATGACTCTGAGGCTCTCG +
Preference number: 6 (lower is better)
Translates to: FSHWLRRNAPPV*WVGGRMTLRLS
Trigger: CGAGAGCCTCAGAGTCATCCTCCCGCCCACCCAGCATACAGGCGGGGCGTTCCTCCTTAGCCAATGGGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
CDS GCA 72 bp TCTTGCCAAAGCATCCACTCCACAACCCCACCCCTTTaGAAGCAGCGCGTGCGGACCGCGGGCGAATGTCTT +
Preference number: 6 (lower is better)
Translates to: SCQSIHSTTPPL*KQRVRTAGECL
Trigger: AAGACATTCGCCCGCGGTCCGCACGCGCTGCTTGCAAAGGGGTGGGGTTGTGGAGTGGATGCTTTGGCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
CDS CCA 72 bp ATGGGCTTCACGAAGGTGCTGGCGGTAGAAGTAGCTTaGCGGACGCCGCTCCCCGCCATCTTGCCAAAGCAT +
Preference number: 6 (lower is better)
Translates to: MGFTKVLAVEVA*RTPLPAILPKH
Trigger: ATGCTTTGGCAAGATGGCGGGGAGCGGCGTCCGCCAAGCTACTTCTACCGCCAGCACCTTCGTGAAGCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS CAA 72 bp AATGGGCTTCACGAAGGTGCTGGCGGTAGAAGTAGCTaGGCGGACGCCGCTCCCCGCCATCTTGCCAAAGCA +
Preference number: 6 (lower is better)
Translates to: NGLHEGAGGRSS*ADAAPRHLAKA
Trigger: TGCTTTGGCAAGATGGCGGGGAGCGGCGTCCGCCAAGCTACTTCTACCGCCAGCACCTTCGTGAAGCCCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS CAA 72 bp ATCTTGCCAAAGCATCCACTCCACAACCCCACCCCTTaGCAAGCAGCGCGTGCGGACCGCGGGCGAATGTCT +
Preference number: 6 (lower is better)
Translates to: ILPKHPLHNPTP*QAARADRGRMS
Trigger: AGACATTCGCCCGCGGTCCGCACGCGCTGCTTGCAAAGGGGTGGGGTTGTGGAGTGGATGCTTTGGCAAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
CDS CAA 90 bp CCGACTGAAAATGGGCTTCACGAAGGTGCTGGCGGTAGAAGTAGCTaGGCGGACGCCGCTCCCCGCCATCTTGCCAAAGCATCCACTCCA +
Preference number: 6 (lower is better)
Translates to: PTENGLHEGAGGRSS*ADAAPRHLAKASTP
Trigger: TGGAGTGGATGCTTTGGCAAGATGGCGGGGAGCGGCGTCCGCCAAGCTACTTCTACCGCCAGCACCTTCGTGAAGCCCATTTTCAGTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628740.2
ENST00000630201.4
ENST00000630971.2
CDS CCA 72 bp GATAGGAAATCCTTTGGCCTTGGCGCTTCTGTTTCATaGAAGAACCGCATAACATGTGTCCGCTGCTTCCAT +
Preference number: 6 (lower is better)
Translates to: DRKSFGLGASVS*KNRITCVRCFH
Trigger: ATGGAAGCAGCGGACACATGTTATGCGGTTCTTCCATGAAACAGAAGCGCCAAGGCCAAAGGATTTCCTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000470753.1
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000607132.1
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628004.1
ENST00000628198.1
ENST00000628740.2
ENST00000630201.4
ENST00000630511.1
ENST00000630971.2
CDS CAA 72 bp GATCGTGGCCAACATAGAACTTGGATAGGAAATCCTTaGGCCTTGGCGCTTCTGTTTCATGGAAGAACCGCA +
Preference number: 6 (lower is better)
Translates to: DRGQHRTWIGNP*ALALLFHGRTA
Trigger: TGCGGTTCTTCCATGAAACAGAAGCGCCAAGGCCAAAGGATTTCCTATCCAAGTTCTATGTTGGCCACGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000470753.1
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000607132.1
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628004.1
ENST00000628198.1
ENST00000628740.2
ENST00000630201.4
ENST00000630511.1
ENST00000630971.2
CDS CCA 72 bp ATGACCAGAAGATCAACCACCCTGGGGTCTGTGACATaGGCATTCTTCATAAACATTTCTCGGACTTTATCC +
Preference number: 6 (lower is better)
Translates to: MTRRSTTLGSVT*AFFINISRTLS
Trigger: GGATAAAGTCCGAGAAATGTTTATGAAGAATGCCCATGTCACAGACCCCAGGGTGGTTGATCTTCTGGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000470753.1
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000607132.1
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628004.1
ENST00000628198.1
ENST00000628740.2
ENST00000630201.4
ENST00000630511.1
ENST00000630971.2
CDS GCA 72 bp TCTGTTTCATGGAAGAACCGCATAACATGTGTCCGCTaGTTCCATACTTTAATTGTTTCTTCCAGTTCGATC +
Preference number: 6 (lower is better)
Translates to: SVSWKNRITCVR*FHTLIVSSSSI
Trigger: GATCGAACTGGAAGAAACAATTAAAGTATGGAAGCAGCGGACACATGTTATGCGGTTCTTCCATGAAACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000470753.1
ENST00000498737.8
ENST00000605916.1
ENST00000605927.3
ENST00000607132.1
ENST00000610887.2
ENST00000617763.1
ENST00000627617.1
ENST00000628004.1
ENST00000628198.1
ENST00000628740.2
ENST00000630201.4
ENST00000630511.1
ENST00000630971.2