Pregenerated sensors for NDUFA12 (Homo sapiens)
Ensembl gene IDs: ENSG00000184752Ensembl transcript IDs: ENST00000538372.7, ENST00000546788.1, ENST00000547447.1, ENST00000547986.5, ENST00000550187.6, ENST00000551991.5, ENST00000552205.5, ENST00000552205.6, ENST00000682903.1, ENST00000684171.1, ENST00000684522.1, ENST00000684558.1
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTAACCTTCAGGGGCAAGCACGTCCTGATTCCATTACTGTGGGTTTaGGTCAGGAGTCCAGGCATCCGTTTGTTGGGTCCTCTATTCCAG | + |
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Preference number: 1 (lower is better) Translates to: LTFRGKHVLIPLLWV*VRSPGIRLLGPLFQ Trigger: CTGGAATAGAGGACCCAACAAACGGATGCCTGGACTCCTGACCCAAACCCACAGTAATGGAATCAGGACGTGCTTGCCCCTGAAGGTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552205.5 |
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| 3UTR CCA 90 bp | TTCCATTACTGTGGGTTTGGGTCAGGAGTCCAGGCATCCGTTTGTTaGGTCCTCTATTCCAGAGTCTCTTCTGAAAGCTGCAATCGCATT | + |
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Preference number: 1 (lower is better) Translates to: FHYCGFGSGVQASVC*VLYSRVSSESCNRI Trigger: AATGCGATTGCAGCTTTCAGAAGAGACTCTGGAATAGAGGACCCAACAAACGGATGCCTGGACTCCTGACCCAAACCCACAGTAATGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552205.5 |
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| 3UTR CCA 90 bp | CATGTCATATTGATGAATACCAAGCTTGCTTGTGCAGTGGGGAGCTaGAGAAAGAATCGTCCTCAGTGTGAGGCTGTTGGCGTCTCATCT | + |
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Preference number: 1 (lower is better) Translates to: HVILMNTKLACAVGS*RKNRPQCEAVGVSS Trigger: AGATGAGACGCCAACAGCCTCACACTGAGGACGATTCTTTCTCCAGCTCCCCACTGCACAAGCAAGCTTGGTATTCATCAATATGACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552205.5 |
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| 3UTR GCA 90 bp | TCCAGAGTCTCTTCTGAAAGCTGCAATCGCATTTCTGACCAAGACTaGAGTCTCATTCACACGGTTGTTGGCAGAATTCATTTCCTTGTG | + |
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Preference number: 1 (lower is better) Translates to: SRVSSESCNRISDQD*SLIHTVVGRIHFLV Trigger: CACAAGGAAATGAATTCTGCCAACAACCGTGTGAATGAGACTGCAGTCTTGGTCAGAAATGCGATTGCAGCTTTCAGAAGAGACTCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552205.5 |
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| 3UTR CAA 90 bp | GTGCAGTGGGGAGCTGGAGAAAGAATCGTCCTCAGTGTGAGGCTGTaGGCGTCTCATCTTCACTCTTGTCTTCTGAACTTGCCTAGTGCA | + |
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Preference number: 2 (lower is better) Translates to: VQWGAGERIVLSVRL*ASHLHSCLLNLPSA Trigger: TGCACTAGGCAAGTTCAGAAGACAAGAGTGAAGATGAGACGCCAACAGCCTCACACTGAGGACGATTCTTTCTCCAGCTCCCCACTGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552205.5 |
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| 3UTR-3UTR TCA 90 bp | CCAGACCATGTCATATTGATGAATACCAAGCTTGCTTGTGCAGTGGGGAGCTGGGAATCGTCCTCAGTGTaGGGCTGTTGGCGTCTCATC | + |
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Preference number: 2 (lower is better) Translates to: PDHVILMNTKLACAVGSWESSSV*GCWRLI Trigger: GATGAGACGCCAACAGCCTCACACTGAGGACGATTC...CCAGCTCCCCACTGCACAAGCAAGCTTGGTATTCATCAATATGACATGGTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552205.5 |
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| 3UTR-3UTR TCA 90 bp | GTGGGGAGCTGGAGAAAGAATCGTCCTCAGTGTGAGGCTGTTGGCGTCTCATCTTTCCAGAGTCTCTTCTaGAAGCTGCAATCGCATTTC | + |
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Preference number: 2 (lower is better) Translates to: VGSWRKNRPQCEAVGVSSFQSLF*KLQSHF Trigger: GAAATGCGATTGCAGCTTTCAGAAGAGACTCTGGAA...AGATGAGACGCCAACAGCCTCACACTGAGGACGATTCTTTCTCCAGCTCCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552205.5 |
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| 3UTR-3UTR TCA 90 bp | GTGGGGAGCTGGAGAAAGAATCGTCCTCAGTGTGAGGCTGTTGGCGTCTCATCTAAAAACACACATTGGTaGGAGAGGAGTTGGCATTCT | + |
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Preference number: 2 (lower is better) Translates to: VGSWRKNRPQCEAVGVSSKNTHW*ERSWHS Trigger: AGAATGCCAACTCCTCTCTCACCAATGTGTGTTTTT...AGATGAGACGCCAACAGCCTCACACTGAGGACGATTCTTTCTCCAGCTCCCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000552205.5 |
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| 3UTR CAA 90 bp | GCTGCAATCGCATTTCTGACCAAGACTGCAGTCTCATTCACACGGTaGTTGGCAGAATTCATTTCCTTGTGGGATGTTGGACTGAGGACC | + |
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Preference number: 2 (lower is better) Translates to: AAIAFLTKTAVSFTR*LAEFISLWDVGLRT Trigger: GGTCCTCAGTCCAACATCCCACAAGGAAATGAATTCTGCCAACAACCGTGTGAATGAGACTGCAGTCTTGGTCAGAAATGCGATTGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552205.5 |
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| 3UTR-3UTR CCA 90 bp | ACCAAGCTTGCTTGTGCAGTGGGGAGCTGGAGAAAGAATCGTCCTCAGTGTGAGAGTAAGGCCATTCCTTaGGAAGCAAAACCTTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: TKLACAVGSWRKNRPQCESKAIP*EAKPSE Trigger: TTCTGAAGGTTTTGCTTCCCAAGGAATGGCCTTACT...CTCACACTGAGGACGATTCTTTCTCCAGCTCCCCACTGCACAAGCAAGCTTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000552205.5 |
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| 3UTR-3UTR CCA 90 bp | GATGAATACCAAGCTTGCTTGTGCAGTGGGGAGCTGGAGAAAGAATCGTCCTCAGAATTCATTTCCTTGTaGGATGTTGGACTGAGGACC | + |
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Preference number: 2 (lower is better) Translates to: DEYQACLCSGELEKESSSEFISL*DVGLRT Trigger: GGTCCTCAGTCCAACATCCCACAAGGAAATGAATTC...TGAGGACGATTCTTTCTCCAGCTCCCCACTGCACAAGCAAGCTTGGTATTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552205.5 |
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| 3UTR-3UTR TCA 90 bp | CCAGACCATGTCATATTGATGAATACCAAGCTTGCTTGTGCAGTGGGGAGCTGGTTTGCTGGCTGGCATTaGAGATTATCTTCAGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: PDHVILMNTKLACAVGSWFAGWH*RLSSVP Trigger: AGGAACTGAAGATAATCTTCAATGCCAGCCAGCAAA...CCAGCTCCCCACTGCACAAGCAAGCTTGGTATTCATCAATATGACATGGTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552205.5 |
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| 3UTR CAA 90 bp | ACCCAAGCTGATGAATATACAGGAAAACTTCCAGACCATGTCATATaGATGAATACCAAGCTTGCTTGTGCAGTGGGGAGCTGGAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: TQADEYTGKLPDHVI*MNTKLACAVGSWRK Trigger: CTTTCTCCAGCTCCCCACTGCACAAGCAAGCTTGGTATTCATCAATATGACATGGTCTGGAAGTTTTCCTGTATATTCATCAGCTTGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000552205.5 |
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| 3UTR CCA 72 bp | AGGGGCAAGCACGTCCTGATTCCATTACTGTGGGTTTaGGTCAGGAGTCCAGGCATCCGTTTGTTGGGTCCT | + |
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Preference number: 3 (lower is better) Translates to: RGKHVLIPLLWV*VRSPGIRLLGP Trigger: AGGACCCAACAAACGGATGCCTGGACTCCTGACCCAAACCCACAGTAATGGAATCAGGACGTGCTTGCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552205.5 |
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| 3UTR TCA 72 bp | TGCAGTGGGGAGCTGGAGAAAGAATCGTCCTCAGTGTaGGGCTGTTGGCGTCTCATCTTCACTCTTGTCTTC | + |
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Preference number: 3 (lower is better) Translates to: CSGELEKESSSV*GCWRLIFTLVF Trigger: GAAGACAAGAGTGAAGATGAGACGCCAACAGCCTCACACTGAGGACGATTCTTTCTCCAGCTCCCCACTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552205.5 |
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| 3UTR-3UTR CAA 90 bp | GTGGGGAGCTGGAGAAAGAATCGTCCTCAGTGTGAGGCTGTTGGCGTCTCATCTGTCTCATTCACACGGTaGTTGGCAGAATTCATTTCC | + |
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Preference number: 3 (lower is better) Translates to: VGSWRKNRPQCEAVGVSSVSFTR*LAEFIS Trigger: GGAAATGAATTCTGCCAACAACCGTGTGAATGAGAC...AGATGAGACGCCAACAGCCTCACACTGAGGACGATTCTTTCTCCAGCTCCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552205.5 |
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| 3UTR-3UTR CAA 90 bp | GATGAATACCAAGCTTGCTTGTGCAGTGGGGAGCTGGAGAAAGAATCGTCCTCATCCATTACTGTGGGTTaGGGTCAGGAGTCCAGGCAT | + |
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Preference number: 3 (lower is better) Translates to: DEYQACLCSGELEKESSSSITVG*GQESRH Trigger: ATGCCTGGACTCCTGACCCAAACCCACAGTAATGGA...TGAGGACGATTCTTTCTCCAGCTCCCCACTGCACAAGCAAGCTTGGTATTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552205.5 |
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| 3UTR CCA 72 bp | TTGATGAATACCAAGCTTGCTTGTGCAGTGGGGAGCTaGAGAAAGAATCGTCCTCAGTGTGAGGCTGTTGGC | + |
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Preference number: 3 (lower is better) Translates to: LMNTKLACAVGS*RKNRPQCEAVG Trigger: GCCAACAGCCTCACACTGAGGACGATTCTTTCTCCAGCTCCCCACTGCACAAGCAAGCTTGGTATTCATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552205.5 |
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| 3UTR-3UTR CAA 90 bp | CCTGATTCCATTACTGTGGGTTTGGGTCAGGAGTCCAGGCATCCGTTTGTTGGGTTTTGCTGGCTGGCATaGAAGATTATCTTCAGTTCC | + |
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Preference number: 3 (lower is better) Translates to: PDSITVGLGQESRHPFVGFCWLA*KIIFSS Trigger: GGAACTGAAGATAATCTTCAATGCCAGCCAGCAAAA...CCCAACAAACGGATGCCTGGACTCCTGACCCAAACCCACAGTAATGGAATCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552205.5 |
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| 3UTR GCA 72 bp | AGACCATGTCATATTGATGAATACCAAGCTTGCTTGTaGAGTGGGGAGCTGGAGAAAGAATCGTCCTCAGTG | + |
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Preference number: 3 (lower is better) Translates to: RPCHIDEYQACL*SGELEKESSSV Trigger: CACTGAGGACGATTCTTTCTCCAGCTCCCCACTGCACAAGCAAGCTTGGTATTCATCAATATGACATGGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552205.5 |
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| CDS-3UTR TCA 90 bp | TCATACTGTGAAGCCAACGATGCAGTATTACTATTAGGTGCTAGAGGCCGATTCGACCGCCGTGGCCGGTaGTCTGCTGCAGCCCGCGTT | + |
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Preference number: 4 (lower is better) Translates to: SYCEANDAVLLLGARGRFDRRGR*SAAARV Trigger: AACGCGGGCTGCAGCAGATCACCGGCCACGGCGGTC...GAATCGGCCTCTAGCACCTAATAGTAATACTGCATCGTTGGCTTCACAGTATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546788.1 |
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| CDS-3UTR GCA 90 bp | GATGCAGTATTACTATTAGGTGCTAGAGGCCGATTCTGGATTTTCAGTATGCTCGCCCCGCCTCCCGGGTaGGCCGAGCAAAACCCACCG | + |
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Preference number: 4 (lower is better) Translates to: DAVLLLGARGRFWIFSMLAPPPG*AEQNPP Trigger: CGGTGGGTTTTGCTCGGCGCACCCGGGAGGCGGGGC...GAGCATACTGAAAATCCAGAATCGGCCTCTAGCACCTAATAGTAATACTGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000546788.1 |
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| CDS-3UTR CCA 90 bp | TCATACTGTGAAGCCAACGATGCAGTATTACTATTAGGTGCTAGAGGCCGATTCTCCATCTTGCCTCGCTaGCCCCGCCTCCCGGGTGCG | + |
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Preference number: 4 (lower is better) Translates to: SYCEANDAVLLLGARGRFSILPR*PRLPGA Trigger: CGCACCCGGGAGGCGGGGCCAGCGAGGCAAGATGGA...GAATCGGCCTCTAGCACCTAATAGTAATACTGCATCGTTGGCTTCACAGTATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546788.1 |
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| CDS-3UTR CCA 90 bp | TCATACTGTGAAGCCAACGATGCAGTATTACTATTAGGTGCTAGAGGCCGATTCCCTCGGAGACCGCCGTaGCCGGTGATCTGCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SYCEANDAVLLLGARGRFPRRPP*PVICCS Trigger: GCTGCAGCAGATCACCGGCCACGGCGGTCTCCGAGG...GAATCGGCCTCTAGCACCTAATAGTAATACTGCATCGTTGGCTTCACAGTATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546788.1 |
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| CDS-3UTR GCA 90 bp | TCATACTGTGAAGCCAACGATGCAGTATTACTATTAGGTGCTAGAGGCCGATTCCCGTGGCCGGTGATCTaGTGCAGCCCGCGTTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: SYCEANDAVLLLGARGRFPWPVI*CSPRFR Trigger: CCTGAAACGCGGGCTGCAGCAGATCACCGGCCACGG...GAATCGGCCTCTAGCACCTAATAGTAATACTGCATCGTTGGCTTCACAGTATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546788.1 |
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| CDS-3UTR GCA 90 bp | GATGCAGTATTACTATTAGGTGCTAGAGGCCGATTCTGGATTTTCAGTATGCTCTGGCCGGTGATCTGCTaGAGCCCGCGTTTCAGGACC | + |
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Preference number: 4 (lower is better) Translates to: DAVLLLGARGRFWIFSMLWPVIC*SPRFRT Trigger: GGTCCTGAAACGCGGGCTGCAGCAGATCACCGGCCA...GAGCATACTGAAAATCCAGAATCGGCCTCTAGCACCTAATAGTAATACTGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546788.1 |
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| CDS-3UTR GCA 90 bp | GATGCAGTATTACTATTAGGTGCTAGAGGCCGATTCTGGATTTTCAGTATGCTCGCACTAACTCCATCTTaGCTCGCTGGCCCCGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: DAVLLLGARGRFWIFSMLALTPS*LAGPAS Trigger: GGAGGCGGGGCCAGCGAGGCAAGATGGAGTTAGTGC...GAGCATACTGAAAATCCAGAATCGGCCTCTAGCACCTAATAGTAATACTGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000546788.1 |
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| CDS-3UTR TCA 90 bp | AGTAGTATATACAACCCATCGGTGACGGCCCCAGGTTCTGCCATTAATTACATGGGGTGCCAGTCACGTTaGATTTATGGTTCGTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: SSIYNPSVTAPGSAINYMGCQSR*IYGSSK Trigger: TTTGGACGAACCATAAATTCAACGTGACTGGCACCC...CATGTAATTAATGGCAGAACCTGGGGCCGTCACCGATGGGTTGTATATACTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551991.5 |
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| CDS-3UTR TCA 90 bp | AGTAGTATATACAACCCATCGGTGACGGCCCCAGGTTCTGCCATTAATTACATGTTACTTGTAAGGTGTTaGAGGTGGGATCCACTCCTG | + |
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Preference number: 4 (lower is better) Translates to: SSIYNPSVTAPGSAINYMLLVRC*RWDPLL Trigger: CAGGAGTGGATCCCACCTTCAACACCTTACAAGTAA...CATGTAATTAATGGCAGAACCTGGGGCCGTCACCGATGGGTTGTATATACTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551991.5 |
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| CDS-3UTR GCA 90 bp | GATGCAGTATTACTATTAGGTGCTAGAGGCCGATTCTGGATTTTCAGTATGCTCCCGCGTTTCAGGACCTaGACTAACTCCATCTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: DAVLLLGARGRFWIFSMLPRFRT*TNSILP Trigger: AGGCAAGATGGAGTTAGTGCAGGTCCTGAAACGCGG...GAGCATACTGAAAATCCAGAATCGGCCTCTAGCACCTAATAGTAATACTGCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546788.1 |
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| 3UTR CAA 72 bp | TTCCTTGTGGGATGTTGGACTGAGGACCTCCGTTTTTaGCTGGCTGGCATTGAAGATTATCTTCAGTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: FLVGCWTEDLRF*LAGIEDYLQFL Trigger: CAGGAACTGAAGATAATCTTCAATGCCAGCCAGCAAAAAACGGAGGTCCTCAGTCCAACATCCCACAAGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000552205.5 |
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| 3UTR CAA 72 bp | TCCAGACCATGTCATATTGATGAATACCAAGCTTGCTaGTGCAGTGGGGAGCTGGAGAAAGAATCGTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: SRPCHIDEYQAC*CSGELEKESSS Trigger: TGAGGACGATTCTTTCTCCAGCTCCCCACTGCACAAGCAAGCTTGGTATTCATCAATATGACATGGTCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552205.5 |
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| CDS-3UTR TCA 90 bp | TCATACTGTGAAGCCAACGATGCAGTATTACTATTAGGTGCTAGAGGCCGATTCGGGTGCCAGTCACGTTaGATTTATGGTTCGTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: SYCEANDAVLLLGARGRFGCQSR*IYGSSK Trigger: TTTGGACGAACCATAAATTCAACGTGACTGGCACCC...GAATCGGCCTCTAGCACCTAATAGTAATACTGCATCGTTGGCTTCACAGTATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546788.1 |
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| CDS-3UTR CCA 90 bp | TCATACTGTGAAGCCAACGATGCAGTATTACTATTAGGTGCTAGAGGCCGATTCGCTAGAGGCCGATTCTaGATTTTCAGTATGCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: SYCEANDAVLLLGARGRFARGRF*IFSMLR Trigger: CCTGAGCATACTGAAAATCCAGAATCGGCCTCTAGC...GAATCGGCCTCTAGCACCTAATAGTAATACTGCATCGTTGGCTTCACAGTATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546788.1 |
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| 3UTR CAA 72 bp | GCATTTCTGACCAAGACTGCAGTCTCATTCACACGGTaGTTGGCAGAATTCATTTCCTTGTGGGATGTTGGA | + |
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Preference number: 4 (lower is better) Translates to: AFLTKTAVSFTR*LAEFISLWDVG Trigger: TCCAACATCCCACAAGGAAATGAATTCTGCCAACAACCGTGTGAATGAGACTGCAGTCTTGGTCAGAAATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552205.5 |
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| CDS-3UTR TCA 90 bp | TCATACTGTGAAGCCAACGATGCAGTATTACTATTAGGTGCTAGAGGCCGATTCGGTTACTCTGGCTCATaGAGGTTTAGTTTAAAACCC | + |
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Preference number: 4 (lower is better) Translates to: SYCEANDAVLLLGARGRFGYSGS*RFSLKP Trigger: GGGTTTTAAACTAAACCTTCATGAGCCAGAGTAACC...GAATCGGCCTCTAGCACCTAATAGTAATACTGCATCGTTGGCTTCACAGTATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546788.1 |
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| CDS-3UTR GCA 90 bp | TCATACTGTGAAGCCAACGATGCAGTATTACTATTAGGTGCTAGAGGCCGATTCTCTGGATTTTCAGTATaGTCAGGTTACTCTGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: SYCEANDAVLLLGARGRFSGFSV*SGYSGS Trigger: TGAGCCAGAGTAACCTGAGCATACTGAAAATCCAGA...GAATCGGCCTCTAGCACCTAATAGTAATACTGCATCGTTGGCTTCACAGTATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546788.1 |
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| CDS-3UTR CCA 90 bp | AGTAGTATATACAACCCATCGGTGACGGCCCCAGGTTCTGCCATTAATTACATGGTAAAGATACTTCCTTaGGCCTCAGTTTCTTCATCA | + |
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Preference number: 4 (lower is better) Translates to: SSIYNPSVTAPGSAINYMVKILP*ASVSSS Trigger: TGATGAAGAAACTGAGGCCCAAGGAAGTATCTTTAC...CATGTAATTAATGGCAGAACCTGGGGCCGTCACCGATGGGTTGTATATACTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551991.5 |
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| 3UTR CAA 72 bp | GATGAATATACAGGAAAACTTCCAGACCATGTCATATaGATGAATACCAAGCTTGCTTGTGCAGTGGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: DEYTGKLPDHVI*MNTKLACAVGS Trigger: GCTCCCCACTGCACAAGCAAGCTTGGTATTCATCAATATGACATGGTCTGGAAGTTTTCCTGTATATTCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000552205.5 |
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| CDS-3UTR TCA 90 bp | GATGCAGTATTACTATTAGGTGCTAGAGGCCGATTCTGGATTTTCAGTATGCTCTCATCAGTCATACTGTaGAGCCAACGATGCAGTATT | + |
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Preference number: 4 (lower is better) Translates to: DAVLLLGARGRFWIFSMLSSVIL*SQRCSI Trigger: AATACTGCATCGTTGGCTTCACAGTATGACTGATGA...GAGCATACTGAAAATCCAGAATCGGCCTCTAGCACCTAATAGTAATACTGCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546788.1 |
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| CDS GCA 90 bp | AGACCGCCGTGGCCGGTGATCTGCTGCAGCCCGCGTTTCAGGACCTaGACTAACTCCATCTTGCCTCGCTGGCCCCGCCTCCCGGGTGCG | + |
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Preference number: 5 (lower is better) Translates to: RPPWPVICCSPRFRT*TNSILPRWPRLPGA Trigger: CGCACCCGGGAGGCGGGGCCAGCGAGGCAAGATGGAGTTAGTGCAGGTCCTGAAACGCGGGCTGCAGCAGATCACCGGCCACGGCGGTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000546788.1 ENST00000547986.5 ENST00000684171.1 |
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| CDS GCA 90 bp | GCAAACTTTAAGCAGCAACCCGCAGCAAGGACTGAGATGATTCACTaGTGTGGGTGGGGCTCAGGCCTTTCCCACAGGGGAGAATCCTTG | + |
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Preference number: 5 (lower is better) Translates to: ANFKQQPAARTEMIH*CGWGSGLSHRGESL Trigger: CAAGGATTCTCCCCTGTGGGAAAGGCCTGAGCCCCACCCACAGCAGTGAATCATCTCAGTCCTTGCTGCGGGTTGCTGCTTAAAGTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538372.7 |
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| CDS GCA 90 bp | GATACTGGAGCTCTCTCTCTGCATGTGAGTCCCAAGGAAAGGTCATaGGAGCACACAGTGGGAAGGCAGCTGTCTGCAAGTCAGGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: DTGALSLHVSPKERS*EHTVGRQLSASQEE Trigger: CTCTTCCTGACTTGCAGACAGCTGCCTTCCCACTGTGTGCTCGCATGACCTTTCCTTGGGACTCACATGCAGAGAGAGAGCTCCAGTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552205.6 |
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| CDS TCA 90 bp | GTGTCCATGCAAAAAGAAGAGATACTGGAGCTCTCTCTCTGCATGTaGGTCCCAAGGAAAGGTCATGCGAGCACACAGTGGGAAGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: VSMQKEEILELSLCM*VPRKGHASTQWEGS Trigger: GCTGCCTTCCCACTGTGTGCTCGCATGACCTTTCCTTGGGACTCACATGCAGAGAGAGAGCTCCAGTATCTCTTCTTTTTGCATGGACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000552205.6 |
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| CDS TCA 90 bp | TTCTGGAAACCTCTGGAAAATTCCAGGCTAGTCAATCTTCAGTGGTaGCAGAAGCCCTCTTACCCTCCCTCTGGTTTCCTAACAGGGGCC | + |
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Preference number: 5 (lower is better) Translates to: FWKPLENSRLVNLQW*QKPSYPPSGFLTGA Trigger: GGCCCCTGTTAGGAAACCAGAGGGAGGGTAAGAGGGCTTCTGTCACCACTGAAGATTGACTAGCCTGGAATTTTCCAGAGGTTTCCAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000552205.6 |
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| CDS CCA 90 bp | GAGGAAAGCTTTGCTGATTCAGCTGGGAGGCATCAGGCAATCCTCTaGCTTCTGCAGCATCTCCTAACAAAGTGTTGCTTCTGGAACCCT | + |
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Preference number: 5 (lower is better) Translates to: EESFADSAGRHQAIL*LLQHLLTKCCFWNP Trigger: AGGGTTCCAGAAGCAACACTTTGTTAGGAGATGCTGCAGAAGCCAGAGGATTGCCTGATGCCTCCCAGCTGAATCAGCAAAGCTTTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547447.1 |
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| CDS-3UTR CAA 90 bp | GATGCAGTATTACTATTAGGTGCTAGAGGCCGATTCTGGATTTTCAGTATGCTCTGCACTAACTCCATCTaGCCTCGCTGGCCCCGCCTC | + |
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Preference number: 5 (lower is better) Translates to: DAVLLLGARGRFWIFSMLCTNSI*PRWPRL Trigger: GAGGCGGGGCCAGCGAGGCAAGATGGAGTTAGTGCA...GAGCATACTGAAAATCCAGAATCGGCCTCTAGCACCTAATAGTAATACTGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000546788.1 |
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| CDS TCA 90 bp | TTTACTGAATTCACCTTTATCAGGGCCTGCTGCTGTGCTCTGTGCTaGAATACTGAGGCACAGTCCCTGCCCTTCTGGAGCTTAGAATCT | + |
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Preference number: 5 (lower is better) Translates to: FTEFTFIRACCCALC*NTEAQSLPFWSLES Trigger: AGATTCTAAGCTCCAGAAGGGCAGGGACTGTGCCTCAGTATTTCAGCACAGAGCACAGCAGCAGGCCCTGATAAAGGTGAATTCAGTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552205.6 |
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| CDS TCA 90 bp | GAGGCCGATTCTGGATTTTCAGTATGCTCAGGTTACTCTGGCTCATaGAGGTTTAGTTTAAAACCCATGAGGCTCCATTCAGGAGGCACC | + |
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Preference number: 5 (lower is better) Translates to: EADSGFSVCSGYSGS*RFSLKPMRLHSGGT Trigger: GGTGCCTCCTGAATGGAGCCTCATGGGTTTTAAACTAAACCTTCATGAGCCAGAGTAACCTGAGCATACTGAAAATCCAGAATCGGCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000546788.1 |
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| CDS CCA 90 bp | CATCATACCGAATGGGGAAAGGCTGAAAGCATTCTCCCTGAGAACTaGAACGAGACAAGGATGCCCACATTCACCACTTCTATTCAACAC | + |
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Preference number: 5 (lower is better) Translates to: HHTEWGKAESILPEN*NETRMPTFTTSIQH Trigger: GTGTTGAATAGAAGTGGTGAATGTGGGCATCCTTGTCTCGTTCCAGTTCTCAGGGAGAATGCTTTCAGCCTTTCCCCATTCGGTATGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000550187.6 ENST00000682903.1 |
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| CDS-3UTR CAA 90 bp | AGTAGTATATACAACCCATCGGTGACGGCCCCAGGTTCTGCCATTAATTACATGGGGGTGCCAGTCACGTaGAATTTATGGTTCGTCCAA | + |
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Preference number: 5 (lower is better) Translates to: SSIYNPSVTAPGSAINYMGVPVT*NLWFVQ Trigger: TTGGACGAACCATAAATTCAACGTGACTGGCACCCC...CATGTAATTAATGGCAGAACCTGGGGCCGTCACCGATGGGTTGTATATACTACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000551991.5 |
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| CDS TCA 90 bp | AGTCATACTGTGAAGCCAACGATGCCTGATGGAACTGCAGGTTGCTaGATAAGCCTGCTGCCCTCTTTGACAAGTCTGTACTTTTCAGTT | + |
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Preference number: 5 (lower is better) Translates to: SHTVKPTMPDGTAGC*ISLLPSLTSLYFSV Trigger: AACTGAAAAGTACAGACTTGTCAAAGAGGGCAGCAGGCTTATTCAGCAACCTGCAGTTCCATCAGGCATCGTTGGCTTCACAGTATGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000684558.1 |
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| CDS-3UTR CAA 90 bp | TCATACTGTGAAGCCAACGATGCAGTATTACTATTAGGTGCTAGAGGCCGATTCGGGGTGCCAGTCACGTaGAATTTATGGTTCGTCCAA | + |
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Preference number: 5 (lower is better) Translates to: SYCEANDAVLLLGARGRFGVPVT*NLWFVQ Trigger: TTGGACGAACCATAAATTCAACGTGACTGGCACCCC...GAATCGGCCTCTAGCACCTAATAGTAATACTGCATCGTTGGCTTCACAGTATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546788.1 |
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| CDS-3UTR CAA 90 bp | AGTAGTATATACAACCCATCGGTGACGGCCCCAGGTTCTGCCATTAATTACATGTTTACTTGTAAGGTGTaGAAGGTGGGATCCACTCCT | + |
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Preference number: 5 (lower is better) Translates to: SSIYNPSVTAPGSAINYMFTCKV*KVGSTP Trigger: AGGAGTGGATCCCACCTTCAACACCTTACAAGTAAA...CATGTAATTAATGGCAGAACCTGGGGCCGTCACCGATGGGTTGTATATACTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551991.5 |
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| CDS-3UTR CAA 90 bp | AGTAGTATATACAACCCATCGGTGACGGCCCCAGGTTCTGCCATTAATTACATGGGTAAAGATACTTCCTaGGGCCTCAGTTTCTTCATC | + |
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Preference number: 5 (lower is better) Translates to: SSIYNPSVTAPGSAINYMGKDTS*GLSFFI Trigger: GATGAAGAAACTGAGGCCCAAGGAAGTATCTTTACC...CATGTAATTAATGGCAGAACCTGGGGCCGTCACCGATGGGTTGTATATACTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551991.5 |
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| CDS GCA 90 bp | CAGAGCCTCCCCAGAGTAAGCCACATTACAACACATGACAGTGTGTaGTGTTCTGAAACAATCACACCTGGTCGTCTTCTTAAAAATTTA | + |
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Preference number: 5 (lower is better) Translates to: QSLPRVSHITTHDSV*CSETITPGRLLKNL Trigger: TAAATTTTTAAGAAGACGACCAGGTGTGATTGTTTCAGAACAGCACACACTGTCATGTGTTGTAATGTGGCTTACTCTGGGGAGGCTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000552205.6 |
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| CDS GCA 90 bp | TTTTCAGTTCACTGCAGTCTCCACTACGTCCTATTGTTTCATAGCTaGACTTCACTCACTTATGTCACATATCTGGGTTTCCAAGTGACT | + |
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Preference number: 5 (lower is better) Translates to: FSVHCSLHYVLLFHS*TSLTYVTYLGFQVT Trigger: AGTCACTTGGAAACCCAGATATGTGACATAAGTGAGTGAAGTGCAGCTATGAAACAATAGGACGTAGTGGAGACTGCAGTGAACTGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000684558.1 |
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| CDS TCA 90 bp | TATCTAGTAAAAGTGGATGACTATACCTACATCTTAGAGTTGCTGTaGAAATTAAACATCACATACATTCACCTAGTTCAGCATCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: YLVKVDDYTYILELL*KLNITYIHLVQHQP Trigger: TGGCTGATGCTGAACTAGGTGAATGTATGTGATGTTTAATTTTCACAGCAACTCTAAGATGTAGGTATAGTCATCCACTTTTACTAGATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538372.7 |
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| CDS CCA 90 bp | GTCCTTAAACTGAGCAAAGACTTGGGCTTTGTCACTTATTATCAGTaGTTATTAGGCAAATTTTATGAGCCTCAGTTTCTTTATCTAGTA | + |
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Preference number: 5 (lower is better) Translates to: VLKLSKDLGFVTYYQ*LLGKFYEPQFLYLV Trigger: TACTAGATAAAGAAACTGAGGCTCATAAAATTTGCCTAATAACCACTGATAATAAGTGACAAAGCCCAAGTCTTTGCTCAGTTTAAGGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538372.7 |
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| CDS GCA 72 bp | TGGCCGGTGATCTGCTGCAGCCCGCGTTTCAGGACCTaGACTAACTCCATCTTGCCTCGCTGGCCCCGCCTC | + |
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Preference number: 6 (lower is better) Translates to: WPVICCSPRFRT*TNSILPRWPRL Trigger: GAGGCGGGGCCAGCGAGGCAAGATGGAGTTAGTGCAGGTCCTGAAACGCGGGCTGCAGCAGATCACCGGCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000546788.1 ENST00000547986.5 ENST00000552205.6 ENST00000684171.1 |
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| CDS GCA 72 bp | CCTAGGCTGGAGTGCAATGGCGCGGCCTCGGCTCACTaGCTGCAACCTCCCCTTCCTGGGTTCAAGCGATTC | + |
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Preference number: 6 (lower is better) Translates to: PRLECNGAASAH*LQPPLPGFKRF Trigger: GAATCGCTTGAACCCAGGAAGGGGAGGTTGCAGGCAGTGAGCCGAGGCCGCGCCATTGCACTCCAGCCTAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538372.7 |
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| CDS CCA 72 bp | TCTTCAGTGGTGACAGAAGCCCTCTTACCCTCCCTCTaGTTTCCTAACAGGGGCCAAGTGAAGGCAATACAG | + |
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Preference number: 6 (lower is better) Translates to: SSVVTEALLPSL*FPNRGQVKAIQ Trigger: CTGTATTGCCTTCACTTGGCCCCTGTTAGGAAACCAGAGGGAGGGTAAGAGGGCTTCTGTCACCACTGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552205.6 |
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| CDS GCA 72 bp | GTCTGGAGACATTTTTGGTTTGTCAGTCAGTGCTGCTaGTGCTGGTCATTCTATGATGCACAGGACAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: VWRHFWFVSQCC*CWSFYDAQDSP Trigger: GGGGCTGTCCTGTGCATCATAGAATGACCAGCAGCAGCAGCACTGACTGACAAACCAAAAATGTCTCCAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000550187.6 ENST00000682903.1 |
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| CDS CCA 72 bp | TCAGGACAGTGCAAACAGAGCATCAGAGCCAAAAGCTaGCAGCTGTGTCCTCAGAAGCAGAACCAGAATAGG | + |
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Preference number: 6 (lower is better) Translates to: SGQCKQSIRAKS*QLCPQKQNQNR Trigger: CCTATTCTGGTTCTGCTTCTGAGGACACAGCTGCCAGCTTTTGGCTCTGATGCTCTGTTTGCACTGTCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552205.6 |
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| CDS TCA 72 bp | CCTCTGGAAAATTCCAGGCTAGTCAATCTTCAGTGGTaGCAGAAGCCCTCTTACCCTCCCTCTGGTTTCCTA | + |
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Preference number: 6 (lower is better) Translates to: PLENSRLVNLQW*QKPSYPPSGFL Trigger: TAGGAAACCAGAGGGAGGGTAAGAGGGCTTCTGTCACCACTGAAGATTGACTAGCCTGGAATTTTCCAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552205.6 |
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| CDS CCA 72 bp | GAATGGGGAAAGGCTGAAAGCATTCTCCCTGAGAACTaGAACGAGACAAGGATGCCCACATTCACCACTTCT | + |
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Preference number: 6 (lower is better) Translates to: EWGKAESILPEN*NETRMPTFTTS Trigger: AGAAGTGGTGAATGTGGGCATCCTTGTCTCGTTCCAGTTCTCAGGGAGAATGCTTTCAGCCTTTCCCCATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000550187.6 ENST00000682903.1 |
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| CDS GCA 72 bp | TTTTGCTGGCTGGCATTGAAGATTATCTTCAGTTCCTaGCACATAGGCCACTCCATAGAGCAGCTCAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: FCWLALKIIFSS*HIGHSIEQLRA Trigger: TGCTCTGAGCTGCTCTATGGAGTGGCCTATGTGGCAGGAACTGAAGATAATCTTCAATGCCAGCCAGCAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552205.6 |
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| CDS CCA 72 bp | AGACATTTTTGGTTTGTCAGTCAGTGCTGCTGCTGCTaGTCATTCTATGATGCACAGGACAGCCCCTCACAA | + |
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Preference number: 6 (lower is better) Translates to: RHFWFVSQCCCC*SFYDAQDSPSQ Trigger: TTGTGAGGGGCTGTCCTGTGCATCATAGAATGACCAGCAGCAGCAGCACTGACTGACAAACCAAAAATGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000550187.6 ENST00000682903.1 |
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| CDS CCA 72 bp | CAACAGAACTGGTGTCCATGCAAAAAGAAGAGATACTaGAGCTCTCTCTCTGCATGTGAGTCCCAAGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: QQNWCPCKKKRY*SSLSACESQGK Trigger: CTTTCCTTGGGACTCACATGCAGAGAGAGAGCTCCAGTATCTCTTCTTTTTGCATGGACACCAGTTCTGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000552205.6 |
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| CDS TCA 72 bp | CAACCATGCTGCACCCAGATCCAGCCCCCAGAACTCTaGGAAAGTAAATTTATGTTGCTAAAGCCACTAAGT | + |
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Preference number: 6 (lower is better) Translates to: QPCCTQIQPPEL*ESKFMLLKPLS Trigger: ACTTAGTGGCTTTAGCAACATAAATTTACTTTCTCAGAGTTCTGGGGGCTGGATCTGGGTGCAGCATGGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000552205.6 |
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| CDS TCA 72 bp | CCAGAAATAGGGGCTTTAAGGAGGACTAAGGTTAAATaGGGTCATAAGGGCGAAGCCCTAATCCAACAGAAC | + |
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Preference number: 6 (lower is better) Translates to: PEIGALRRTKVK*GHKGEALIQQN Trigger: GTTCTGTTGGATTAGGGCTTCGCCCTTATGACCTCATTTAACCTTAGTCCTCCTTAAAGCCCCTATTTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552205.6 |
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| CDS GCA 72 bp | CCCAGAGTAAGCCACATTACAACACATGACAGTGTGTaGTGTTCTGAAACAATCACACCTGGTCGTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: PRVSHITTHDSV*CSETITPGRLL Trigger: AAGAAGACGACCAGGTGTGATTGTTTCAGAACAGCACACACTGTCATGTGTTGTAATGTGGCTTACTCTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552205.6 |
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| CDS GCA 72 bp | AAAGCATTCTCCCTGAGAACTGGAACGAGACAAGGATaGCCACATTCACCACTTCTATTCAACACAGTACTG | + |
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Preference number: 6 (lower is better) Translates to: KAFSLRTGTRQG*PHSPLLFNTVL Trigger: CAGTACTGTGTTGAATAGAAGTGGTGAATGTGGGCATCCTTGTCTCGTTCCAGTTCTCAGGGAGAATGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000550187.6 ENST00000682903.1 |
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| CDS CAA 72 bp | CTCCAGTATGTAGATCCCAGGATGCTAGGGACTGAGTaGTCTTCCTTCTCCCTAAATTCATATGTTGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: LQYVDPRMLGTE*SSFSLNSYVEA Trigger: GGCTTCAACATATGAATTTAGGGAGAAGGAAGACAACTCAGTCCCTAGCATCCTGGGATCTACATACTGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552205.6 |
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| CDS TCA 72 bp | CTAACACTACAAGAGCATGCCACCACCATGCCTGGCTaGCTTTCAGAAGATTTTTGTAGAGATAGGATCTCA | + |
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Preference number: 6 (lower is better) Translates to: LTLQEHATTMPG*LSEDFCRDRIS Trigger: TGAGATCCTATCTCTACAAAAATCTTCTGAAAGTCAGCCAGGCATGGTGGTGGCATGCTCTTGTAGTGTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000684522.1 |
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| CDS GCA 72 bp | CACTGCAGTCTCCACTACGTCCTATTGTTTCATAGCTaGACTTCACTCACTTATGTCACATATCTGGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: HCSLHYVLLFHS*TSLTYVTYLGF Trigger: GAAACCCAGATATGTGACATAAGTGAGTGAAGTGCAGCTATGAAACAATAGGACGTAGTGGAGACTGCAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000684558.1 |
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| CDS CCA 72 bp | GATGCAGTATTACTATTAGGTGCTAGAGGCCGATTCTaGATTTTCAGTATGCTCAGGTTACTCTGGCTCATG | + |
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Preference number: 6 (lower is better) Translates to: DAVLLLGARGRF*IFSMLRLLWLM Trigger: CATGAGCCAGAGTAACCTGAGCATACTGAAAATCCAGAATCGGCCTCTAGCACCTAATAGTAATACTGCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546788.1 |
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| CDS CAA 90 bp | GAAATGGGGGCGGAGGAGCACAGAAGTGCTTATCTCAAGGAGATGTaGAAGATTAAGGTAGATAACGTATGTTTTTGTTTAGCACAGCAC | + |
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Preference number: 6 (lower is better) Translates to: EMGAEEHRSAYLKEM*KIKVDNVCFCLAQH Trigger: GTGCTGTGCTAAACAAAAACATACGTTATCTACCTTAATCTTCAACATCTCCTTGAGATAAGCACTTCTGTGCTCCTCCGCCCCCATTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000550187.6 ENST00000682903.1 |
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| CDS CAA 90 bp | ACAAGTCTGTACTTTTCAGTTCACTGCAGTCTCCACTACGTCCTATaGTTTCATAGCTGCACTTCACTCACTTATGTCACATATCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: TSLYFSVHCSLHYVL*FHSCTSLTYVTYLG Trigger: ACCCAGATATGTGACATAAGTGAGTGAAGTGCAGCTATGAAACAATAGGACGTAGTGGAGACTGCAGTGAACTGAAAAGTACAGACTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000684558.1 |
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| CDS TCA 72 bp | TCTGGATTTTCAGTATGCTCAGGTTACTCTGGCTCATaGAGGTTTAGTTTAAAACCCATGAGGCTCCATTCA | + |
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Preference number: 6 (lower is better) Translates to: SGFSVCSGYSGS*RFSLKPMRLHS Trigger: TGAATGGAGCCTCATGGGTTTTAAACTAAACCTTCATGAGCCAGAGTAACCTGAGCATACTGAAAATCCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000546788.1 |
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| CDS CAA 72 bp | GCGGAGGAGCACAGAAGTGCTTATCTCAAGGAGATGTaGAAGATTAAGGTAGATAACGTATGTTTTTGTTTA | + |
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Preference number: 6 (lower is better) Translates to: AEEHRSAYLKEM*KIKVDNVCFCL Trigger: TAAACAAAAACATACGTTATCTACCTTAATCTTCAACATCTCCTTGAGATAAGCACTTCTGTGCTCCTCCGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000550187.6 ENST00000682903.1 |
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| CDS CCA 72 bp | CTGAGCAAAGACTTGGGCTTTGTCACTTATTATCAGTaGTTATTAGGCAAATTTTATGAGCCTCAGTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: LSKDLGFVTYYQ*LLGKFYEPQFL Trigger: AAGAAACTGAGGCTCATAAAATTTGCCTAATAACCACTGATAATAAGTGACAAAGCCCAAGTCTTTGCTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538372.7 |
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| CDS CCA 72 bp | TCTAGAACATCACATCAGAAAATCTCTTCCAGACATTaGCTTAGGCAAGAAGTCATAACTAAGAACCCAAAT | + |
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Preference number: 6 (lower is better) Translates to: SRTSHQKISSRH*LRQEVITKNPN Trigger: ATTTGGGTTCTTAGTTATGACTTCTTGCCTAAGCCAATGTCTGGAAGAGATTTTCTGATGTGATGTTCTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550187.6 |
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| CDS CCA 72 bp | GGAAAAACTAGCAAGCCACATGTAGAAGAATGGAAGTaGATCTTCATCTCTTGCCTTATACAAAAATCAACT | + |
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Preference number: 6 (lower is better) Translates to: GKTSKPHVEEWK*IFISCLIQKST Trigger: AGTTGATTTTTGTATAAGGCAAGAGATGAAGATCCACTTCCATTCTTCTACATGTGGCTTGCTAGTTTTTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000550187.6 |
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| CDS CAA 72 bp | TATTTACACAATTGGGTCCTTAAACTGAGCAAAGACTaGGGCTTTGTCACTTATTATCAGTGGTTATTAGGC | + |
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Preference number: 6 (lower is better) Translates to: YLHNWVLKLSKD*GFVTYYQWLLG Trigger: GCCTAATAACCACTGATAATAAGTGACAAAGCCCAAGTCTTTGCTCAGTTTAAGGACCCAATTGTGTAAATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538372.7 |
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| CDS TCA 72 bp | ATCAAAAAGATAATAATATATCATGATCAAGTGGGTTaGATACTAGGGATGCAGGGATGGTTTAACATACCC | + |
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Preference number: 6 (lower is better) Translates to: IKKIIIYHDQVG*ILGMQGWFNIP Trigger: GGGTATGTTAAACCATCCCTGCATCCCTAGTATTCAACCCACTTGATCATGATATATTATTATCTTTTTGAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000550187.6 ENST00000682903.1 |
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