RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NDUFA11 (Homo sapiens)

Ensembl gene IDs: ENSG00000174886

Ensembl transcript IDs: ENST00000308961.5, ENST00000418389.6, ENST00000591160.1, ENST00000592634.5, ENST00000593233.1, ENST00000650663.1

Found 319 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCGCCCGGGTCCACACTGCCCAGCAGGCCGTGCTGTGGTGGGCGCTaGCCCCTGCCGGCCGCAGTAGAGACAGAGGCCGGTGCCCTCGAG +
Preference number: 1 (lower is better)
Translates to: PPGSTLPSRPCCGGR*PLPAAVETEAGALE
Trigger: CTCGAGGGCACCGGCCTCTGTCTCTACTGCGGCCGGCAGGGGGCAGCGCCCACCACAGCACGGCCTGCTGGGCAGTGTGGACCCGGGCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR CCA 90 bp GGGGCGCCTGGCAGGCCTGCGCCAACCCTGGCGGCTAGCCCGGAATaGGCTGGGTGGGCGGCGAGCACAGCTCCTGGTCTGAGCCGTCGG +
Preference number: 1 (lower is better)
Translates to: GAPGRPAPTLAASPE*AGWAASTAPGLSRR
Trigger: CCGACGGCTCAGACCAGGAGCTGTGCTCGCCGCCCACCCAGCCCATTCCGGGCTAGCCGCCAGGGTTGGCGCAGGCCTGCCAGGCGCCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR CCA 90 bp GTCCTGCAGGCGAGGTGGGGGCGCCTGGCAGGCCTGCGCCAACCCTaGCGGCTAGCCCGGAATGGGCTGGGTGGGCGGCGAGCACAGCTC +
Preference number: 1 (lower is better)
Translates to: VLQARWGRLAGLRQP*RLARNGLGGRRAQL
Trigger: GAGCTGTGCTCGCCGCCCACCCAGCCCATTCCGGGCTAGCCGCCAGGGTTGGCGCAGGCCTGCCAGGCGCCCCCACCTCGCCTGCAGGAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR TCA 90 bp GGGTGGGCGGCGAGCACAGCTCCTGGTCTGAGCCGTCGGCTCCCTTaGACACAGGGAGGCACCTGGGGCTGGGAGGTGCGAAGGGGCGTG +
Preference number: 1 (lower is better)
Translates to: GWAASTAPGLSRRLP*TQGGTWGWEVRRGV
Trigger: CACGCCCCTTCGCACCTCCCAGCCCCAGGTGCCTCCCTGTGTTCAAGGGAGCCGACGGCTCAGACCAGGAGCTGTGCTCGCCGCCCACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR GCA 90 bp TGGTGGGCGCTGCCCCCTGCCGGCCGCAGTAGAGACAGAGGCCGGTaGCCTCGAGTGGATGCGATGCCCGTGAGTGGATGGGATGCCTGC +
Preference number: 1 (lower is better)
Translates to: WWALPPAGRSRDRGR*PRVDAMPVSGWDAC
Trigger: GCAGGCATCCCATCCACTCACGGGCATCGCATCCACTCGAGGGCACCGGCCTCTGTCTCTACTGCGGCCGGCAGGGGGCAGCGCCCACCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR TCA 90 bp TGTGCCCTGCAGCCCCCAGGCACCTCTCCTGGACCAGGAGGCCCCTaGTCGCCCACTGCTCTCCCTCACAGCAGGCCTCTGCTGTTGCTG +
Preference number: 1 (lower is better)
Translates to: CALQPPGTSPGPGGP*SPTALPHSRPLLLL
Trigger: CAGCAACAGCAGAGGCCTGCTGTGAGGGAGAGCAGTGGGCGATCAGGGGCCTCCTGGTCCAGGAGAGGTGCCTGGGGGCTGCAGGGCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR TCA 90 bp CAGTTCCAGTGGGAGCTGGGGAGGGACAAGGCCTCCCCAAGGTCTTaGCGCAGAGACAGCAGTGACGGCGTACGCCCTGCCCTCGCACCC +
Preference number: 1 (lower is better)
Translates to: QFQWELGRDKASPRS*RRDSSDGVRPALAP
Trigger: GGGTGCGAGGGCAGGGCGTACGCCGTCACTGCTGTCTCTGCGTCAAGACCTTGGGGAGGCCTTGTCCCTCCCCAGCTCCCACTGGAACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR TCA 90 bp GGCCAGTGGCAGAGACAGGGGGTGACCTTGGTGACCTGTGTCCTCTaGCAAGGCACACAGAAGGAAGGCGGCACAGAGCGAGGGCGGCGG +
Preference number: 1 (lower is better)
Translates to: GQWQRQGVTLVTCVL*QGTQKEGGTERGRR
Trigger: CCGCCGCCCTCGCTCTGTGCCGCCTTCCTTCTGTGTGCCTTGTCAGAGGACACAGGTCACCAAGGTCACCCCCTGTCTCTGCCACTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR GCA 90 bp GCCCCTGATCGCCCACTGCTCTCCCTCACAGCAGGCCTCTGCTGTTaGTGTGTGCTCTGCCTGGACCAGCCTCCCGCTGGGTACACATGG +
Preference number: 1 (lower is better)
Translates to: APDRPLLSLTAGLCC*CVLCLDQPPAGYTW
Trigger: CCATGTGTACCCAGCGGGAGGCTGGTCCAGGCAGAGCACACAGCAACAGCAGAGGCCTGCTGTGAGGGAGAGCAGTGGGCGATCAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR GCA 90 bp CCTGCCATTCATCACTCCCAACATGCCAGGCCAGAGCGGCTGAGCTaGAAGAGGGCTCGTTCACTCCTCCCGCTGGCCCTGAGGGCCCGA +
Preference number: 1 (lower is better)
Translates to: PAIHHSQHARPERLS*KRARSLLPLALRAR
Trigger: TCGGGCCCTCAGGGCCAGCGGGAGGAGTGAACGAGCCCTCTTGCAGCTCAGCCGCTCTGGCCTGGCATGTTGGGAGTGATGAATGGCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR GCA 90 bp GCAGGCTGGAGGTCCCGGCAGGCACAGGGCTCACACCTTGGGTTTTaGAAACACCTCCCAGCCCTCCAGCCGGCCCATCTTGACCAGGGA +
Preference number: 1 (lower is better)
Translates to: AGWRSRQAQGSHLGF*KHLPALQPAHLDQG
Trigger: TCCCTGGTCAAGATGGGCCGGCTGGAGGGCTGGGAGGTGTTTGCAAAACCCAAGGTGTGAGCCCTGTGCCTGCCGGGACCTCCAGCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR CCA 90 bp CTCCTTTGCCCATGGATGCCAGGGCCAGGCCACGCATCTGTCCCGTaGTCTGTGTACCGAGGAGCCCCGACAGTGCCCCCACTTCTCCAG +
Preference number: 1 (lower is better)
Translates to: LLCPWMPGPGHASVP*SVYRGAPTVPPLLQ
Trigger: CTGGAGAAGTGGGGGCACTGTCGGGGCTCCTCGGTACACAGACCACGGGACAGATGCGTGGCCTGGCCCTGGCATCCATGGGCAAAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR TCA 90 bp CTCCCCTGTGCCAAGCGTGGCCTTCTCCACCAGGGCTGCACCCTCTaGTGGCTGCAAAGAAGGCCACTTGCTCCTCCAGGTGACCTCGGG +
Preference number: 1 (lower is better)
Translates to: LPCAKRGLLHQGCTL*WLQRRPLAPPGDLG
Trigger: CCCGAGGTCACCTGGAGGAGCAAGTGGCCTTCTTTGCAGCCATCAGAGGGTGCAGCCCTGGTGGAGAAGGCCACGCTTGGCACAGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR GCA 90 bp AGGGCAGGAGTGATGTCTGGCTCATGCTCCAGACGGGCTCCCCTGTaGCAAGCGTGGCCTTCTCCACCAGGGCTGCACCCTCTGATGGCT +
Preference number: 1 (lower is better)
Translates to: RAGVMSGSCSRRAPL*QAWPSPPGLHPLMA
Trigger: AGCCATCAGAGGGTGCAGCCCTGGTGGAGAAGGCCACGCTTGGCACAGGGGAGCCCGTCTGGAGCATGAGCCAGACATCACTCCTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR TCA 90 bp GAGGGCGGCGGGGATGCTGGCTTGTACACAGGGTGGTCAGGACAGTaGGGGGAACAGCATTCCACGCAGTGCACTGCCCATGCAAAGGCC +
Preference number: 1 (lower is better)
Translates to: EGGGDAGLYTGWSGQ*GEQHSTQCTAHAKA
Trigger: GGCCTTTGCATGGGCAGTGCACTGCGTGGAATGCTGTTCCCCTCACTGTCCTGACCACCCTGTGTACAAGCCAGCATCCCCGCCGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR CCA 90 bp AGAAGCGGCCATGGTGCAGGGCTGAGGGTGACCGTCGTGGGGACGTaGACTAGTCTTTCCTCCTGTCCAGCCTTCGGTGTCCTTGGCTGG +
Preference number: 1 (lower is better)
Translates to: RSGHGAGLRVTVVGT*TSLSSCPAFGVLGW
Trigger: CCAGCCAAGGACACCGAAGGCTGGACAGGAGGAAAGACTAGTCCACGTCCCCACGACGGTCACCCTCAGCCCTGCACCATGGCCGCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR GCA 90 bp ATCGCCCACTGCTCTCCCTCACAGCAGGCCTCTGCTGTTGCTGTGTaGTCTGCCTGGACCAGCCTCCCGCTGGGTACACATGGAAAAGCC +
Preference number: 1 (lower is better)
Translates to: IAHCSPSQQASAVAV*SAWTSLPLGTHGKA
Trigger: GGCTTTTCCATGTGTACCCAGCGGGAGGCTGGTCCAGGCAGAGCACACAGCAACAGCAGAGGCCTGCTGTGAGGGAGAGCAGTGGGCGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR GCA 90 bp GAGCCACGGCGCAGGGCCAGGCCGGTGTTCTTGGAGCCTTGTCTCTaGTGGGGATGTGTCTCCAGGGATGGATTCTCGGGAAGCAAGTGT +
Preference number: 1 (lower is better)
Translates to: EPRRRARPVFLEPCL*WGCVSRDGFSGSKC
Trigger: ACACTTGCTTCCCGAGAATCCATCCCTGGAGACACATCCCCAGCAGAGACAAGGCTCCAAGAACACCGGCCTGGCCCTGCGCCGTGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR GCA 90 bp GTCAGGACAGTGAGGGGAACAGCATTCCACGCAGTGCACTGCCCATaGAAAGGCCCTGGGGCAGGACTGTACCTGGCATGTGGGAGGAGC +
Preference number: 1 (lower is better)
Translates to: VRTVRGTAFHAVHCP*KGPGAGLYLACGRS
Trigger: GCTCCTCCCACATGCCAGGTACAGTCCTGCCCCAGGGCCTTTGCATGGGCAGTGCACTGCGTGGAATGCTGTTCCCCTCACTGTCCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR GCA 90 bp GTGCCAAGCGTGGCCTTCTCCACCAGGGCTGCACCCTCTGATGGCTaGAAAGAAGGCCACTTGCTCCTCCAGGTGACCTCGGGCCACTTA +
Preference number: 1 (lower is better)
Translates to: VPSVAFSTRAAPSDG*KEGHLLLQVTSGHL
Trigger: TAAGTGGCCCGAGGTCACCTGGAGGAGCAAGTGGCCTTCTTTGCAGCCATCAGAGGGTGCAGCCCTGGTGGAGAAGGCCACGCTTGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR CCA 90 bp CCACGGCGCAGGGCCAGGCCGGTGTTCTTGGAGCCTTGTCTCTGCTaGGGATGTGTCTCCAGGGATGGATTCTCGGGAAGCAAGTGTGTG +
Preference number: 1 (lower is better)
Translates to: PRRRARPVFLEPCLC*GCVSRDGFSGSKCV
Trigger: CACACACTTGCTTCCCGAGAATCCATCCCTGGAGACACATCCCCAGCAGAGACAAGGCTCCAAGAACACCGGCCTGGCCCTGCGCCGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR CCA 90 bp GTGATGTCTGGCTCATGCTCCAGACGGGCTCCCCTGTGCCAAGCGTaGCCTTCTCCACCAGGGCTGCACCCTCTGATGGCTGCAAAGAAG +
Preference number: 1 (lower is better)
Translates to: VMSGSCSRRAPLCQA*PSPPGLHPLMAAKK
Trigger: CTTCTTTGCAGCCATCAGAGGGTGCAGCCCTGGTGGAGAAGGCCACGCTTGGCACAGGGGAGCCCGTCTGGAGCATGAGCCAGACATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR GCA 90 bp AGGCCGGTGCCCTCGAGTGGATGCGATGCCCGTGAGTGGATGGGATaGCTGCAGGGAGGTGGAATCGTCTTTCTTTGTGGGGCATCTCTG +
Preference number: 1 (lower is better)
Translates to: RPVPSSGCDAREWMG*LQGGGIVFLCGASL
Trigger: CAGAGATGCCCCACAAAGAAAGACGATTCCACCTCCCTGCAGGCATCCCATCCACTCACGGGCATCGCATCCACTCGAGGGCACCGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR GCA 90 bp CCTGTCCAGCCTTCGGTGTCCTTGGCTGGAGGTTTGGGGCTGTATTaGCCATTCCTAGAAGCCATCACTTCCCGGCTGCGGTGGGCAGGA +
Preference number: 1 (lower is better)
Translates to: PVQPSVSLAGGLGLY*PFLEAITSRLRWAG
Trigger: TCCTGCCCACCGCAGCCGGGAAGTGATGGCTTCTAGGAATGGGCAATACAGCCCCAAACCTCCAGCCAAGGACACCGAAGGCTGGACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR GCA 90 bp CCACTGCTCTCCCTCACAGCAGGCCTCTGCTGTTGCTGTGTGCTCTaGCTGGACCAGCCTCCCGCTGGGTACACATGGAAAAGCCTCTTC +
Preference number: 1 (lower is better)
Translates to: PLLSLTAGLCCCCVL*LDQPPAGYTWKSLF
Trigger: GAAGAGGCTTTTCCATGTGTACCCAGCGGGAGGCTGGTCCAGGCAGAGCACACAGCAACAGCAGAGGCCTGCTGTGAGGGAGAGCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR CCA 90 bp GACAGAGGCCGGTGCCCTCGAGTGGATGCGATGCCCGTGAGTGGATaGGATGCCTGCAGGGAGGTGGAATCGTCTTTCTTTGTGGGGCAT +
Preference number: 1 (lower is better)
Translates to: DRGRCPRVDAMPVSG*DACREVESSFFVGH
Trigger: ATGCCCCACAAAGAAAGACGATTCCACCTCCCTGCAGGCATCCCATCCACTCACGGGCATCGCATCCACTCGAGGGCACCGGCCTCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR CCA 90 bp ATTTCAAGCTCCACTACCCAGGGTGGGCCTCAGCGCGCGCATCCGTaGAAGAGGGCTAAGAGATCTGGTACAGGGTTTGGGCCGCACACG +
Preference number: 1 (lower is better)
Translates to: ISSSTTQGGPQRAHP*KRAKRSGTGFGPHT
Trigger: CGTGTGCGGCCCAAACCCTGTACCAGATCTCTTAGCCCTCTTCCACGGATGCGCGCGCTGAGGCCCACCCTGGGTAGTGGAGCTTGAAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR CCA 90 bp GGTGTTCTTGGAGCCTTGTCTCTGCTGGGGATGTGTCTCCAGGGATaGATTCTCGGGAAGCAAGTGTGTGCCCTGCAGCCCCCAGGCACC +
Preference number: 1 (lower is better)
Translates to: GVLGALSLLGMCLQG*ILGKQVCALQPPGT
Trigger: GGTGCCTGGGGGCTGCAGGGCACACACTTGCTTCCCGAGAATCCATCCCTGGAGACACATCCCCAGCAGAGACAAGGCTCCAAGAACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR TCA 90 bp GCAGTAGAGACAGAGGCCGGTGCCCTCGAGTGGATGCGATGCCCGTaGGTGGATGGGATGCCTGCAGGGAGGTGGAATCGTCTTTCTTTG +
Preference number: 1 (lower is better)
Translates to: AVETEAGALEWMRCP*VDGMPAGRWNRLSL
Trigger: CAAAGAAAGACGATTCCACCTCCCTGCAGGCATCCCATCCACTCACGGGCATCGCATCCACTCGAGGGCACCGGCCTCTGTCTCTACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR GCA 90 bp CATGGTGACACATCGGTGTGTCTCAGTCTCTCCTTTGCCCATGGATaGCAGGGCCAGGCCACGCATCTGTCCCGTGGTCTGTGTACCGAG +
Preference number: 1 (lower is better)
Translates to: HGDTSVCLSLSFAHG*QGQATHLSRGLCTE
Trigger: CTCGGTACACAGACCACGGGACAGATGCGTGGCCTGGCCCTGGCATCCATGGGCAAAGGAGAGACTGAGACACACCGATGTGTCACCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR CCA 90 bp AAGACCTCAACCCACCTGCAACCTCTGACCAGTTCCAGTGGGAGCTaGGGAGGGACAAGGCCTCCCCAAGGTCTTGACGCAGAGACAGCA +
Preference number: 1 (lower is better)
Translates to: KTSTHLQPLTSSSGS*GGTRPPQGLDAETA
Trigger: TGCTGTCTCTGCGTCAAGACCTTGGGGAGGCCTTGTCCCTCCCCAGCTCCCACTGGAACTGGTCAGAGGTTGCAGGTGGGTTGAGGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR CCA 90 bp GGAGCCTGCTGGGACCGATGTTCCAGACGGGGGCCCTCTTGTGTGTaGGGTGGGAGTGACGTCAGCCCTCCACAACCTAGTAAATGTTTA +
Preference number: 1 (lower is better)
Translates to: GACWDRCSRRGPSCV*GGSDVSPPQPSKCL
Trigger: TAAACATTTACTAGGTTGTGGAGGGCTGACGTCACTCCCACCCCACACACAAGAGGGCCCCCGTCTGGAACATCGGTCCCAGCAGGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR TCA 90 bp GGCCACAGTAGGTGCTTAAGCAGCAGCAGCAGCTGTCGCTATGACTaGAATGGCTGGTGTTCAAGAAGGCTGCTTTACTTCTTGTCCGGG +
Preference number: 1 (lower is better)
Translates to: GHSRCLSSSSSCRYD*NGWCSRRLLYFLSG
Trigger: CCCGGACAAGAAGTAAAGCAGCCTTCTTGAACACCAGCCATTTCAGTCATAGCGACAGCTGCTGCTGCTGCTTAAGCACCTACTGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR-3UTR TCA 90 bp GGGCGGAGGCCTGCGTGGAACCAGTCCCAGAAGCGGCCATGGTGCAGGGCTGAGCTGGGGGCCTGGGGATaGCCGCCCGGGTCCACACTG +
Preference number: 2 (lower is better)
Translates to: GRRPAWNQSQKRPWCRAELGAWG*PPGSTL
Trigger: CAGTGTGGACCCGGGCGGTCATCCCCAGGCCCCCAG...CTCAGCCCTGCACCATGGCCGCTTCTGGGACTGGTTCCACGCAGGCCTCCGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR-3UTR GCA 90 bp CGCCCGGGTCCACACTGCCCAGCAGGCCGTGCTGTGGTGGGCGCTGCCCCCTGCAGAGACAGAGGCCGGTaGCCTCGAGTGGATGCGATG +
Preference number: 2 (lower is better)
Translates to: RPGPHCPAGRAVVGAAPCRDRGR*PRVDAM
Trigger: CATCGCATCCACTCGAGGGCACCGGCCTCTGTCTCT...GCAGGGGGCAGCGCCCACCACAGCACGGCCTGCTGGGCAGTGTGGACCCGGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR CAA 90 bp TGGGTGGGCGGCGAGCACAGCTCCTGGTCTGAGCCGTCGGCTCCCTaGAACACAGGGAGGCACCTGGGGCTGGGAGGTGCGAAGGGGCGT +
Preference number: 2 (lower is better)
Translates to: WVGGEHSSWSEPSAP*NTGRHLGLGGAKGR
Trigger: ACGCCCCTTCGCACCTCCCAGCCCCAGGTGCCTCCCTGTGTTCAAGGGAGCCGACGGCTCAGACCAGGAGCTGTGCTCGCCGCCCACCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR-3UTR GCA 90 bp GGAGGTGATGTCAGGCCCGGGTGGGGCTCGGCCGGACCAAGACGCTCCACGCCCCCAGAGCGGCTGAGCTaGAAGAGGGCTCGTTCACTC +
Preference number: 2 (lower is better)
Translates to: GGDVRPGWGSAGPRRSTPPERLS*KRARSL
Trigger: GAGTGAACGAGCCCTCTTGCAGCTCAGCCGCTCTGG...GGGCGTGGAGCGTCTTGGTCCGGCCGAGCCCCACCCGGGCCTGACATCACCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR-3UTR CCA 90 bp GTGATGTCAGGCCCGGGTGGGGCTCGGCCGGACCAAGACGCTCCACGCCCTGGCGTGCAGGGAGAGAGATaGCAGGGCGAGACTCCATCC +
Preference number: 2 (lower is better)
Translates to: VMSGPGGARPDQDAPRPGVQGER*QGETPS
Trigger: GGATGGAGTCTCGCCCTGCCATCTCTCTCCCTGCAC...GCCAGGGCGTGGAGCGTCTTGGTCCGGCCGAGCCCCACCCGGGCCTGACATCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR-3UTR CCA 90 bp GGAGGTGATGTCAGGCCCGGGTGGGGCTCGGCCGGACCAAGACGCTCCACGCCCGGCAGGAGTGATGTCTaGCTCATGCTCCAGACGGGC +
Preference number: 2 (lower is better)
Translates to: GGDVRPGWGSAGPRRSTPGRSDV*LMLQTG
Trigger: GCCCGTCTGGAGCATGAGCCAGACATCACTCCTGCC...GGGCGTGGAGCGTCTTGGTCCGGCCGAGCCCCACCCGGGCCTGACATCACCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR-3UTR TCA 90 bp CGCCCGGGTCCACACTGCCCAGCAGGCCGTGCTGTGGTGGGCGCTGCCCCCTGCTTTGTGGGGCATCTCTaGGGGGCCCTTATTCCCATT +
Preference number: 2 (lower is better)
Translates to: RPGPHCPAGRAVVGAAPCFVGHL*GALIPI
Trigger: AATGGGAATAAGGGCCCCTCAGAGATGCCCCACAAA...GCAGGGGGCAGCGCCCACCACAGCACGGCCTGCTGGGCAGTGTGGACCCGGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR-3UTR GCA 90 bp TGGCTTGGGGACAGGGAGCAGTTCCAGCCTGAGCTGGGCTACAGTCAAGACCTCCGGGGGCAGCTCCCCTaGAGGGCTCCAGGTGCAGGG +
Preference number: 2 (lower is better)
Translates to: WLGDREQFQPELGYSQDLRGQLP*RAPGAG
Trigger: CCCTGCACCTGGAGCCCTGCAGGGGAGCTGCCCCCG...GAGGTCTTGACTGTAGCCCAGCTCAGGCTGGAACTGCTCCCTGTCCCCAAGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR-3UTR GCA 90 bp GGAGGTGATGTCAGGCCCGGGTGGGGCTCGGCCGGACCAAGACGCTCCACGCCCGCACCCTCTGATGGCTaGAAAGAAGGCCACTTGCTC +
Preference number: 2 (lower is better)
Translates to: GGDVRPGWGSAGPRRSTPAPSDG*KEGHLL
Trigger: GAGCAAGTGGCCTTCTTTGCAGCCATCAGAGGGTGC...GGGCGTGGAGCGTCTTGGTCCGGCCGAGCCCCACCCGGGCCTGACATCACCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR-3UTR GCA 90 bp GCCAGGCCACGCATCTGTCCCGTGGTCTGTGTACCGAGGAGCCCCGACAGTGCCGTGATGTCTGGCTCATaGTCCAGACGGGCTCCCCTG +
Preference number: 2 (lower is better)
Translates to: ARPRICPVVCVPRSPDSAVMSGS*SRRAPL
Trigger: CAGGGGAGCCCGTCTGGAGCATGAGCCAGACATCAC...GGCACTGTCGGGGCTCCTCGGTACACAGACCACGGGACAGATGCGTGGCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR CAA 90 bp GGGCACCGGGCCATGGTGACACATCGGTGTGTCTCAGTCTCTCCTTaGCCCATGGATGCCAGGGCCAGGCCACGCATCTGTCCCGTGGTC +
Preference number: 2 (lower is better)
Translates to: GHRAMVTHRCVSVSP*PMDARARPRICPVV
Trigger: GACCACGGGACAGATGCGTGGCCTGGCCCTGGCATCCATGGGCAAAGGAGAGACTGAGACACACCGATGTGTCACCATGGCCCGGTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR-3UTR TCA 90 bp CAGCGCGCGCATCCGTGGAAGAGGGCTAAGAGATCTGGTACAGGGTTTGGGCCGACCAGGTGGGAAAGCTaGGGCCTGGGTGCTGCCGTC +
Preference number: 2 (lower is better)
Translates to: QRAHPWKRAKRSGTGFGPTRWES*GLGAAV
Trigger: GACGGCAGCACCCAGGCCTCAGCTTTCCCACCTGGT...CGGCCCAAACCCTGTACCAGATCTCTTAGCCCTCTTCCACGGATGCGCGCGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR-3UTR TCA 90 bp GGCGAGCACAGCTCCTGGTCTGAGCCGTCGGCTCCCTTGAACACAGGGAGGCACTGGATGCGATGCCCGTaGGTGGATGGGATGCCTGCA +
Preference number: 2 (lower is better)
Translates to: GEHSSWSEPSAPLNTGRHWMRCP*VDGMPA
Trigger: TGCAGGCATCCCATCCACTCACGGGCATCGCATCCA...GTGCCTCCCTGTGTTCAAGGGAGCCGACGGCTCAGACCAGGAGCTGTGCTCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR-3UTR GCA 90 bp ACAGACAAGGCCTGGAGTGCGGAGGAAGGGATGGAATCTGACGCCTGTGGTCACTGCTGTGGTGGGCGCTaGCCCCTGCCGGCCGCAGTA +
Preference number: 2 (lower is better)
Translates to: TDKAWSAEEGMESDACGHCCGGR*PLPAAV
Trigger: TACTGCGGCCGGCAGGGGGCAGCGCCCACCACAGCA...GTGACCACAGGCGTCAGATTCCATCCCTTCCTCCGCACTCCAGGCCTTGTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR-3UTR GCA 90 bp ACAGACAAGGCCTGGAGTGCGGAGGAAGGGATGGAATCTGACGCCTGTGGTCACCGCCCGGGTCCACACTaGCCAGCAGGCCGTGCTGTG +
Preference number: 2 (lower is better)
Translates to: TDKAWSAEEGMESDACGHRPGPH*PAGRAV
Trigger: CACAGCACGGCCTGCTGGGCAGTGTGGACCCGGGCG...GTGACCACAGGCGTCAGATTCCATCCCTTCCTCCGCACTCCAGGCCTTGTCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR-3UTR CCA 90 bp AGGGCCAGGCCACGCATCTGTCCCGTGGTCTGTGTACCGAGGAGCCCCGACAGTACAGGGAGGCTGGCTTaGGGACAGGGAGCAGTTCCA +
Preference number: 2 (lower is better)
Translates to: RARPRICPVVCVPRSPDSTGRLA*GQGAVP
Trigger: TGGAACTGCTCCCTGTCCCCAAGCCAGCCTCCCTGT...ACTGTCGGGGCTCCTCGGTACACAGACCACGGGACAGATGCGTGGCCTGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR-3UTR TCA 90 bp GCCAGGCCACGCATCTGTCCCGTGGTCTGTGTACCGAGGAGCCCCGACAGTGCCGGGACTCACACTCTTTaGAGAGAGACAGGGAGGCTG +
Preference number: 2 (lower is better)
Translates to: ARPRICPVVCVPRSPDSAGTHTL*RETGRL
Trigger: CAGCCTCCCTGTCTCTCTTCAAAGAGTGTGAGTCCC...GGCACTGTCGGGGCTCCTCGGTACACAGACCACGGGACAGATGCGTGGCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR-3UTR GCA 90 bp AGGGCCAGGCCACGCATCTGTCCCGTGGTCTGTGTACCGAGGAGCCCCGACAGTCAGCATTCCACGCAGTaGACTGCCCATGCAAAGGCC +
Preference number: 2 (lower is better)
Translates to: RARPRICPVVCVPRSPDSQHSTQ*TAHAKA
Trigger: GGCCTTTGCATGGGCAGTGCACTGCGTGGAATGCTG...ACTGTCGGGGCTCCTCGGTACACAGACCACGGGACAGATGCGTGGCCTGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR-3UTR CCA 90 bp CAGGGCCAGGCCACGCATCTGTCCCGTGGTCTGTGTACCGAGGAGCCCCGACAGCCCTCTCTGCCTGCCTaGAACCTGCCATTCATCACT +
Preference number: 2 (lower is better)
Translates to: QGQATHLSRGLCTEEPRQPSLPA*NLPFIT
Trigger: AGTGATGAATGGCAGGTTCCAGGCAGGCAGAGAGGG...CTGTCGGGGCTCCTCGGTACACAGACCACGGGACAGATGCGTGGCCTGGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR-3UTR GCA 90 bp CTGGGAGCCAGACTGAGACCCCTGACAGGACACTCTCTTCAGGGATTAAGTCACCCTGCGAGGACACCGTaGTGCCCCCAGCTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: LGARLRPLTGHSLQGLSHPARTP*CPQLGL
Trigger: CAGCCCCAGCTGGGGGCAGCACGGTGTCCTCGCAGG...GTGACTTAATCCCTGAAGAGAGTGTCCTGTCAGGGGTCTCAGTCTGGCTCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR-3UTR CCA 90 bp TGGCTTGGGGACAGGGAGCAGTTCCAGCCTGAGCTGGGCTACAGTCAAGACCTCACGCATTCTGCAGGCTaGAGGTCCCGGCAGGCACAG +
Preference number: 2 (lower is better)
Translates to: WLGDREQFQPELGYSQDLTHSAG*RSRQAQ
Trigger: CTGTGCCTGCCGGGACCTCCAGCCTGCAGAATGCGT...GAGGTCTTGACTGTAGCCCAGCTCAGGCTGGAACTGCTCCCTGTCCCCAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR-3UTR CCA 90 bp CAGCGCGCGCATCCGTGGAAGAGGGCTAAGAGATCTGGTACAGGGTTTGGGCCGGGGACAGACAAGGCCTaGAGTGCGGAGGAAGGGATG +
Preference number: 2 (lower is better)
Translates to: QRAHPWKRAKRSGTGFGPGTDKA*SAEEGM
Trigger: CATCCCTTCCTCCGCACTCCAGGCCTTGTCTGTCCC...CGGCCCAAACCCTGTACCAGATCTCTTAGCCCTCTTCCACGGATGCGCGCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR-3UTR CCA 90 bp TGGCTTGGGGACAGGGAGCAGTTCCAGCCTGAGCTGGGCTACAGTCAAGACCTCCCCATGCAAAGGCCCTaGGGCAGGACTGTACCTGGC +
Preference number: 2 (lower is better)
Translates to: WLGDREQFQPELGYSQDLPMQRP*GRTVPG
Trigger: GCCAGGTACAGTCCTGCCCCAGGGCCTTTGCATGGG...GAGGTCTTGACTGTAGCCCAGCTCAGGCTGGAACTGCTCCCTGTCCCCAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR CAA 90 bp TCCTGTCCAGCCTTCGGTGTCCTTGGCTGGAGGTTTGGGGCTGTATaGCCCATTCCTAGAAGCCATCACTTCCCGGCTGCGGTGGGCAGG +
Preference number: 2 (lower is better)
Translates to: SCPAFGVLGWRFGAV*PIPRSHHFPAAVGR
Trigger: CCTGCCCACCGCAGCCGGGAAGTGATGGCTTCTAGGAATGGGCAATACAGCCCCAAACCTCCAGCCAAGGACACCGAAGGCTGGACAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR-3UTR TCA 90 bp TGTTGCTGTGTGCTCTGCCTGGACCAGCCTCCCGCTGGGTACACATGGAAAAGCTGTGTGGGGTGGGAGTaGCGTCAGCCCTCCACAACC +
Preference number: 2 (lower is better)
Translates to: CCCVLCLDQPPAGYTWKSCVGWE*RQPSTT
Trigger: GGTTGTGGAGGGCTGACGTCACTCCCACCCCACACA...GCTTTTCCATGTGTACCCAGCGGGAGGCTGGTCCAGGCAGAGCACACAGCAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR-3UTR GCA 90 bp GTTGCTTCCCAGCAGGAACCCAGGCTGTGGGTCCTCATCCCGCCCCACACTGACTCTCAGTCTCTCCTTTaGCCATGGATGCCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: VASQQEPRLWVLIPPHTDSQSLL*PWMPGP
Trigger: TGGCCCTGGCATCCATGGGCAAAGGAGAGACTGAGA...GTCAGTGTGGGGCGGGATGAGGACCCACAGCCTGGGTTCCTGCTGGGAAGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR-3UTR CCA 90 bp AAGCCTCTTCATCCTTGGGCCCTCTCTGCTGTGCCGCCTCCTCCTCTAGGAAGCTGCGATGCCCGTGAGTaGATGGGATGCCTGCAGGGA +
Preference number: 2 (lower is better)
Translates to: KPLHPWALSAVPPPPLGSCDARE*MGCLQG
Trigger: TCCCTGCAGGCATCCCATCCACTCACGGGCATCGCA...GCTTCCTAGAGGAGGAGGCGGCACAGCAGAGAGGGCCCAAGGATGAAGAGGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR-3UTR CCA 90 bp AGTCTCTCCTTTGCCCATGGATGCCAGGGCCAGGCCACGCATCTGTCCCGTGGTTCTGACCAGTTCCAGTaGGAGCTGGGGAGGGACAAG +
Preference number: 2 (lower is better)
Translates to: SLSFAHGCQGQATHLSRGSDQFQ*ELGRDK
Trigger: CTTGTCCCTCCCCAGCTCCCACTGGAACTGGTCAGA...ACCACGGGACAGATGCGTGGCCTGGCCCTGGCATCCATGGGCAAAGGAGAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR CAA 90 bp TTCTCCACCAGGGCTGCACCCTCTGATGGCTGCAAAGAAGGCCACTaGCTCCTCCAGGTGACCTCGGGCCACTTAATTCCCTCCCTGAGC +
Preference number: 2 (lower is better)
Translates to: FSTRAAPSDGCKEGH*LLQVTSGHLIPSLS
Trigger: GCTCAGGGAGGGAATTAAGTGGCCCGAGGTCACCTGGAGGAGCAAGTGGCCTTCTTTGCAGCCATCAGAGGGTGCAGCCCTGGTGGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR-3UTR TCA 90 bp ATGTGGAAACTGATGCACAGAGGGAGGCCGGAGTCCAGGTTGCTTCCCAGCAGGCAGGGCTGCACCCTCTaGTGGCTGCAAAGAAGGCCA +
Preference number: 2 (lower is better)
Translates to: MWKLMHRGRPESRLLPSRQGCTL*WLQRRP
Trigger: TGGCCTTCTTTGCAGCCATCAGAGGGTGCAGCCCTG...CCTGCTGGGAAGCAACCTGGACTCCGGCCTCCCTCTGTGCATCAGTTTCCACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR-3UTR GCA 90 bp ACAGACAAGGCCTGGAGTGCGGAGGAAGGGATGGAATCTGACGCCTGTGGTCACAAGCTGAGGCCTGGGTaGTGCCGTCCTCTGAGGACA +
Preference number: 2 (lower is better)
Translates to: TDKAWSAEEGMESDACGHKLRPG*CRPLRT
Trigger: TGTCCTCAGAGGACGGCAGCACCCAGGCCTCAGCTT...GTGACCACAGGCGTCAGATTCCATCCCTTCCTCCGCACTCCAGGCCTTGTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR-3UTR GCA 90 bp TGTTGCTGTGTGCTCTGCCTGGACCAGCCTCCCGCTGGGTACACATGGAAAAGCGTGCCCTCGAGTGGATaGGATGCCCGTGAGTGGATG +
Preference number: 2 (lower is better)
Translates to: CCCVLCLDQPPAGYTWKSVPSSG*DAREWM
Trigger: CATCCACTCACGGGCATCGCATCCACTCGAGGGCAC...GCTTTTCCATGTGTACCCAGCGGGAGGCTGGTCCAGGCAGAGCACACAGCAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR-3UTR GCA 90 bp CAGCCCTCCAGCCGGCCCATCTTGACCAGGGAGGCCGCTATGCCAAAGTACACGTGCCTGCCTGGAACCTaGCATTCATCACTCCCAACA +
Preference number: 2 (lower is better)
Translates to: QPSSRPILTREAAMPKYTCLPGT*HSSLPT
Trigger: TGTTGGGAGTGATGAATGGCAGGTTCCAGGCAGGCA...CGTGTACTTTGGCATAGCGGCCTCCCTGGTCAAGATGGGCCGGCTGGAGGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR-3UTR CCA 90 bp CCTCTTGTGTGTGGGGTGGGAGTGACGTCAGCCCTCCACAACCTAGTAAATGTTCTCCACTACCCAGGGTaGGCCTCAGCGCGCGCATCC +
Preference number: 2 (lower is better)
Translates to: PLVCGVGVTSALHNLVNVLHYPG*ASARAS
Trigger: GGATGCGCGCGCTGAGGCCCACCCTGGGTAGTGGAG...AACATTTACTAGGTTGTGGAGGGCTGACGTCACTCCCACCCCACACACAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR-3UTR CCA 90 bp CCTCTTGTGTGTGGGGTGGGAGTGACGTCAGCCCTCCACAACCTAGTAAATGTTGGCGAGCACAGCTCCTaGTCTGAGCCGTCGGCTCCC +
Preference number: 2 (lower is better)
Translates to: PLVCGVGVTSALHNLVNVGEHSS*SEPSAP
Trigger: GGGAGCCGACGGCTCAGACCAGGAGCTGTGCTCGCC...AACATTTACTAGGTTGTGGAGGGCTGACGTCACTCCCACCCCACACACAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR-3UTR CCA 90 bp AAAGGCCCTGGGGCAGGACTGTACCTGGCATGTGGGAGGAGCAGTGAGGAGGCCACTTCTTGTCCGGGATaGAACAGAGAGGGTGGAGGA +
Preference number: 2 (lower is better)
Translates to: KGPGAGLYLACGRSSEEATSCPG*NREGGG
Trigger: TCCTCCACCCTCTCTGTTCCATCCCGGACAAGAAGT...GGCCTCCTCACTGCTCCTCCCACATGCCAGGTACAGTCCTGCCCCAGGGCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR-3UTR GCA 90 bp GGTGGTCAGGACAGTGAGGGGAACAGCATTCCACGCAGTGCACTGCCCATGCAATTTCTGGACGCATTCTaGAGGCTGGAGGTCCCGGCA +
Preference number: 2 (lower is better)
Translates to: GGQDSEGNSIPRSALPMQFLDAF*RLEVPA
Trigger: TGCCGGGACCTCCAGCCTGCAGAATGCGTCCAGAAA...TTGCATGGGCAGTGCACTGCGTGGAATGCTGTTCCCCTCACTGTCCTGACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR-3UTR GCA 90 bp GGGAGCCAGACTGAGACCCCTGACAGGACACTCTCTTCAGGGATTAAGTCACTCAGACGGGCTCCCCTGTaGCAAGCGTGGCCTTCTCCA +
Preference number: 2 (lower is better)
Translates to: GSQTETPDRTLSSGIKSLRRAPL*QAWPSP
Trigger: TGGAGAAGGCCACGCTTGGCACAGGGGAGCCCGTCT...GAGTGACTTAATCCCTGAAGAGAGTGTCCTGTCAGGGGTCTCAGTCTGGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR-3UTR CCA 90 bp ACACAGGGAGGCACCTGGGGCTGGGAGGTGCGAAGGGGCGTGCGGCCTTTAAATATGCCTGCAGGGAGGTaGAATCGTCTTTCTTTGTGG +
Preference number: 2 (lower is better)
Translates to: TQGGTWGWEVRRGVRPLNMPAGR*NRLSLW
Trigger: CCACAAAGAAAGACGATTCCACCTCCCTGCAGGCAT...ATTTAAAGGCCGCACGCCCCTTCGCACCTCCCAGCCCCAGGTGCCTCCCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR-3UTR CCA 90 bp TGTTGCTGTGTGCTCTGCCTGGACCAGCCTCCCGCTGGGTACACATGGAAAAGCGTGCGGAGGAAGGGATaGAATCTGACGCCTGTGGTC +
Preference number: 2 (lower is better)
Translates to: CCCVLCLDQPPAGYTWKSVRRKG*NLTPVV
Trigger: GACCACAGGCGTCAGATTCCATCCCTTCCTCCGCAC...GCTTTTCCATGTGTACCCAGCGGGAGGCTGGTCCAGGCAGAGCACACAGCAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR-3UTR CCA 90 bp TGTTGCTGTGTGCTCTGCCTGGACCAGCCTCCCGCTGGGTACACATGGAAAAGCCAGCGCGCGCATCCGTaGAAGAGGGCTAAGAGATCT +
Preference number: 2 (lower is better)
Translates to: CCCVLCLDQPPAGYTWKSQRAHP*KRAKRS
Trigger: AGATCTCTTAGCCCTCTTCCACGGATGCGCGCGCTG...GCTTTTCCATGTGTACCCAGCGGGAGGCTGGTCCAGGCAGAGCACACAGCAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR-3UTR GCA 90 bp CCTCTTGTGTGTGGGGTGGGAGTGACGTCAGCCCTCCACAACCTAGTAAATGTTCCATCACTTCCCGGCTaGGGTGGGCAGGATGCATGG +
Preference number: 2 (lower is better)
Translates to: PLVCGVGVTSALHNLVNVPSLPG*GGQDAW
Trigger: CCATGCATCCTGCCCACCGCAGCCGGGAAGTGATGG...AACATTTACTAGGTTGTGGAGGGCTGACGTCACTCCCACCCCACACACAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR CAA 90 bp TGGGGACGTGGACTAGTCTTTCCTCCTGTCCAGCCTTCGGTGTCCTaGGCTGGAGGTTTGGGGCTGTATTGCCCATTCCTAGAAGCCATC +
Preference number: 2 (lower is better)
Translates to: WGRGLVFPPVQPSVS*AGGLGLYCPFLEAI
Trigger: GATGGCTTCTAGGAATGGGCAATACAGCCCCAAACCTCCAGCCAAGGACACCGAAGGCTGGACAGGAGGAAAGACTAGTCCACGTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR-3UTR TCA 90 bp TATTGCCCATTCCTAGAAGCCATCACTTCCCGGCTGCGGTGGGCAGGATGCATGGGTGCTGCCGTCCTCTaGGGACAGAACAAGGAAAGA +
Preference number: 2 (lower is better)
Translates to: YCPFLEAITSRLRWAGCMGAAVL*GQNKER
Trigger: TCTTTCCTTGTTCTGTCCTCAGAGGACGGCAGCACC...CATGCATCCTGCCCACCGCAGCCGGGAAGTGATGGCTTCTAGGAATGGGCAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR-3UTR CCA 90 bp TGTTGCTGTGTGCTCTGCCTGGACCAGCCTCCCGCTGGGTACACATGGAAAAGCTTCGGTGTCCTTGGCTaGAGGTTTGGGGCTGTATTG +
Preference number: 2 (lower is better)
Translates to: CCCVLCLDQPPAGYTWKSFGVLG*RFGAVL
Trigger: CAATACAGCCCCAAACCTCCAGCCAAGGACACCGAA...GCTTTTCCATGTGTACCCAGCGGGAGGCTGGTCCAGGCAGAGCACACAGCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR-3UTR TCA 90 bp GGGAGCCAGACTGAGACCCCTGACAGGACACTCTCTTCAGGGATTAAGTCACTCCCCTTTTCTGTAAAGTaGAGGTTGCGGGGGCAGCTC +
Preference number: 2 (lower is better)
Translates to: GSQTETPDRTLSSGIKSLPFSVK*RLRGQL
Trigger: GAGCTGCCCCCGCAACCTTCACTTTACAGAAAAGGG...GAGTGACTTAATCCCTGAAGAGAGTGTCCTGTCAGGGGTCTCAGTCTGGCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR-3UTR CCA 90 bp TATTGCCCATTCCTAGAAGCCATCACTTCCCGGCTGCGGTGGGCAGGATGCATGAATCGTCTTTCTTTGTaGGGCATCTCTGAGGGGCCC +
Preference number: 2 (lower is better)
Translates to: YCPFLEAITSRLRWAGCMNRLSL*GISEGP
Trigger: GGGCCCCTCAGAGATGCCCCACAAAGAAAGACGATT...CATGCATCCTGCCCACCGCAGCCGGGAAGTGATGGCTTCTAGGAATGGGCAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR GCA 72 bp GGCTGGGGGCCTGGGGATGACCGCCCGGGTCCACACTaGCCAGCAGGCCGTGCTGTGGTGGGCGCTGCCCCC +
Preference number: 3 (lower is better)
Translates to: GWGPGDDRPGPH*PAGRAVVGAAP
Trigger: GGGGGCAGCGCCCACCACAGCACGGCCTGCTGGGCAGTGTGGACCCGGGCGGTCATCCCCAGGCCCCCAGCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR CCA 72 bp GGGTGGGGCTCGGCCGGACCAAGACGCTCCACGCCCTaGCCGGTGCCCACCCTGGGAGCCAGACTGAGACCC +
Preference number: 3 (lower is better)
Translates to: GWGSAGPRRSTP*PVPTLGARLRP
Trigger: GGGTCTCAGTCTGGCTCCCAGGGTGGGCACCGGCCAGGGCGTGGAGCGTCTTGGTCCGGCCGAGCCCCACCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR GCA 72 bp TCCACACTGCCCAGCAGGCCGTGCTGTGGTGGGCGCTaGCCCCTGCCGGCCGCAGTAGAGACAGAGGCCGGT +
Preference number: 3 (lower is better)
Translates to: STLPSRPCCGGR*PLPAAVETEAG
Trigger: ACCGGCCTCTGTCTCTACTGCGGCCGGCAGGGGGCAGCGCCCACCACAGCACGGCCTGCTGGGCAGTGTGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR GCA 72 bp CTGCCCCCTGCCGGCCGCAGTAGAGACAGAGGCCGGTaGCCTCGAGTGGATGCGATGCCCGTGAGTGGATGG +
Preference number: 3 (lower is better)
Translates to: LPPAGRSRDRGR*PRVDAMPVSGW
Trigger: CCATCCACTCACGGGCATCGCATCCACTCGAGGGCACCGGCCTCTGTCTCTACTGCGGCCGGCAGGGGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR CCA 72 bp CGGAGGCCTGCGTGGAACCAGTCCCAGAAGCGGCCATaGTGCAGGGCTGAGGGTGACCGTCGTGGGGACGTG +
Preference number: 3 (lower is better)
Translates to: RRPAWNQSQKRP*CRAEGDRRGDV
Trigger: CACGTCCCCACGACGGTCACCCTCAGCCCTGCACCATGGCCGCTTCTGGGACTGGTTCCACGCAGGCCTCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR CCA 72 bp CCCGGAATGGGCTGGGTGGGCGGCGAGCACAGCTCCTaGTCTGAGCCGTCGGCTCCCTTGAACACAGGGAGG +
Preference number: 3 (lower is better)
Translates to: PGMGWVGGEHSS*SEPSAPLNTGR
Trigger: CCTCCCTGTGTTCAAGGGAGCCGACGGCTCAGACCAGGAGCTGTGCTCGCCGCCCACCCAGCCCATTCCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR TCA 72 bp AGACAAGGCCTGGAGTGCGGAGGAAGGGATGGAATCTaGCGCCTGTGGTCACCGCGGGGCTGGGGGCCTGGG +
Preference number: 3 (lower is better)
Translates to: RQGLECGGRDGI*RLWSPRGWGPG
Trigger: CCCAGGCCCCCAGCCCCGCGGTGACCACAGGCGTCAGATTCCATCCCTTCCTCCGCACTCCAGGCCTTGTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR GCA 72 bp CGCCCACTGCTCTCCCTCACAGCAGGCCTCTGCTGTTaGTGTGTGCTCTGCCTGGACCAGCCTCCCGCTGGG +
Preference number: 3 (lower is better)
Translates to: RPLLSLTAGLCC*CVLCLDQPPAG
Trigger: CCCAGCGGGAGGCTGGTCCAGGCAGAGCACACAGCAACAGCAGAGGCCTGCTGTGAGGGAGAGCAGTGGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR CCA 72 bp GGCCTGAGCCACGGCGCAGGGCCAGGCCGGTGTTCTTaGAGCCTTGTCTCTGCTGGGGATGTGTCTCCAGGG +
Preference number: 3 (lower is better)
Translates to: GLSHGAGPGRCS*SLVSAGDVSPG
Trigger: CCCTGGAGACACATCCCCAGCAGAGACAAGGCTCCAAGAACACCGGCCTGGCCCTGCGCCGTGGCTCAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR CCA 72 bp CCATGGATGCCAGGGCCAGGCCACGCATCTGTCCCGTaGTCTGTGTACCGAGGAGCCCCGACAGTGCCCCCA +
Preference number: 3 (lower is better)
Translates to: PWMPGPGHASVP*SVYRGAPTVPP
Trigger: TGGGGGCACTGTCGGGGCTCCTCGGTACACAGACCACGGGACAGATGCGTGGCCTGGCCCTGGCATCCATGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR TCA 72 bp CAAGGCCTCCCCAAGGTCTTGACGCAGAGACAGCAGTaGCGGCGTACGCCCTGCCCTCGCACCCTCCCTCTC +
Preference number: 3 (lower is better)
Translates to: QGLPKVLTQRQQ*RRTPCPRTLPL
Trigger: GAGAGGGAGGGTGCGAGGGCAGGGCGTACGCCGTCACTGCTGTCTCTGCGTCAAGACCTTGGGGAGGCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR TCA 72 bp TGGGAGCTGGGGAGGGACAAGGCCTCCCCAAGGTCTTaGCGCAGAGACAGCAGTGACGGCGTACGCCCTGCC +
Preference number: 3 (lower is better)
Translates to: WELGRDKASPRS*RRDSSDGVRPA
Trigger: GGCAGGGCGTACGCCGTCACTGCTGTCTCTGCGTCAAGACCTTGGGGAGGCCTTGTCCCTCCCCAGCTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR CCA 72 bp GGCTCATGCTCCAGACGGGCTCCCCTGTGCCAAGCGTaGCCTTCTCCACCAGGGCTGCACCCTCTGATGGCT +
Preference number: 3 (lower is better)
Translates to: GSCSRRAPLCQA*PSPPGLHPLMA
Trigger: AGCCATCAGAGGGTGCAGCCCTGGTGGAGAAGGCCACGCTTGGCACAGGGGAGCCCGTCTGGAGCATGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR-3UTR CAA 90 bp CTGCGCCAACCCTGGCGGCTAGCCCGGAATGGGCTGGGTGGGCGGCGAGCACAGTGGAATCGTCTTTCTTaGTGGGGCATCTCTGAGGGG +
Preference number: 3 (lower is better)
Translates to: LRQPWRLARNGLGGRRAQWNRLS*WGISEG
Trigger: CCCCTCAGAGATGCCCCACAAAGAAAGACGATTCCA...CTGTGCTCGCCGCCCACCCAGCCCATTCCGGGCTAGCCGCCAGGGTTGGCGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR GCA 72 bp GTGATGTCTGGCTCATGCTCCAGACGGGCTCCCCTGTaGCAAGCGTGGCCTTCTCCACCAGGGCTGCACCCT +
Preference number: 3 (lower is better)
Translates to: VMSGSCSRRAPL*QAWPSPPGLHP
Trigger: AGGGTGCAGCCCTGGTGGAGAAGGCCACGCTTGGCACAGGGGAGCCCGTCTGGAGCATGAGCCAGACATCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR GCA 72 bp CATCACTCCCAACATGCCAGGCCAGAGCGGCTGAGCTaGAAGAGGGCTCGTTCACTCCTCCCGCTGGCCCTG +
Preference number: 3 (lower is better)
Translates to: HHSQHARPERLS*KRARSLLPLAL
Trigger: CAGGGCCAGCGGGAGGAGTGAACGAGCCCTCTTGCAGCTCAGCCGCTCTGGCCTGGCATGTTGGGAGTGATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR TCA 72 bp ACAGAGGCCGGTGCCCTCGAGTGGATGCGATGCCCGTaGGTGGATGGGATGCCTGCAGGGAGGTGGAATCGT +
Preference number: 3 (lower is better)
Translates to: TEAGALEWMRCP*VDGMPAGRWNR
Trigger: ACGATTCCACCTCCCTGCAGGCATCCCATCCACTCACGGGCATCGCATCCACTCGAGGGCACCGGCCTCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR GCA 72 bp AGGTCCCGGCAGGCACAGGGCTCACACCTTGGGTTTTaGAAACACCTCCCAGCCCTCCAGCCGGCCCATCTT +
Preference number: 3 (lower is better)
Translates to: RSRQAQGSHLGF*KHLPALQPAHL
Trigger: AAGATGGGCCGGCTGGAGGGCTGGGAGGTGTTTGCAAAACCCAAGGTGTGAGCCCTGTGCCTGCCGGGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR-3UTR CAA 90 bp CAGCGCGCGCATCCGTGGAAGAGGGCTAAGAGATCTGGTACAGGGTTTGGGCCGCAGCCTTCGGTGTCCTaGGCTGGAGGTTTGGGGCTG +
Preference number: 3 (lower is better)
Translates to: QRAHPWKRAKRSGTGFGPQPSVS*AGGLGL
Trigger: CAGCCCCAAACCTCCAGCCAAGGACACCGAAGGCTG...CGGCCCAAACCCTGTACCAGATCTCTTAGCCCTCTTCCACGGATGCGCGCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR-3UTR CAA 90 bp TGTTGCTGTGTGCTCTGCCTGGACCAGCCTCCCGCTGGGTACACATGGAAAAGCGATCTGGTACAGGGTTaGGGCCGCACACGGGCCTGG +
Preference number: 3 (lower is better)
Translates to: CCCVLCLDQPPAGYTWKSDLVQG*GRTRAW
Trigger: CCAGGCCCGTGTGCGGCCCAAACCCTGTACCAGATC...GCTTTTCCATGTGTACCCAGCGGGAGGCTGGTCCAGGCAGAGCACACAGCAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR GCA 72 bp CGCAGGGCCAGGCCGGTGTTCTTGGAGCCTTGTCTCTaGTGGGGATGTGTCTCCAGGGATGGATTCTCGGGA +
Preference number: 3 (lower is better)
Translates to: RRARPVFLEPCL*WGCVSRDGFSG
Trigger: TCCCGAGAATCCATCCCTGGAGACACATCCCCAGCAGAGACAAGGCTCCAAGAACACCGGCCTGGCCCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR CCA 72 bp AGGCCGGTGCCCTCGAGTGGATGCGATGCCCGTGAGTaGATGGGATGCCTGCAGGGAGGTGGAATCGTCTTT +
Preference number: 3 (lower is better)
Translates to: RPVPSSGCDARE*MGCLQGGGIVF
Trigger: AAAGACGATTCCACCTCCCTGCAGGCATCCCATCCACTCACGGGCATCGCATCCACTCGAGGGCACCGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR CCA 72 bp CATGGTGCAGGGCTGAGGGTGACCGTCGTGGGGACGTaGACTAGTCTTTCCTCCTGTCCAGCCTTCGGTGTC +
Preference number: 3 (lower is better)
Translates to: HGAGLRVTVVGT*TSLSSCPAFGV
Trigger: GACACCGAAGGCTGGACAGGAGGAAAGACTAGTCCACGTCCCCACGACGGTCACCCTCAGCCCTGCACCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR CCA 72 bp TCCACTACCCAGGGTGGGCCTCAGCGCGCGCATCCGTaGAAGAGGGCTAAGAGATCTGGTACAGGGTTTGGG +
Preference number: 3 (lower is better)
Translates to: STTQGGPQRAHP*KRAKRSGTGFG
Trigger: CCCAAACCCTGTACCAGATCTCTTAGCCCTCTTCCACGGATGCGCGCGCTGAGGCCCACCCTGGGTAGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR CCA 72 bp TGGGACCGATGTTCCAGACGGGGGCCCTCTTGTGTGTaGGGTGGGAGTGACGTCAGCCCTCCACAACCTAGT +
Preference number: 3 (lower is better)
Translates to: WDRCSRRGPSCV*GGSDVSPPQPS
Trigger: ACTAGGTTGTGGAGGGCTGACGTCACTCCCACCCCACACACAAGAGGGCCCCCGTCTGGAACATCGGTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR GCA 72 bp GTGAGGGGAACAGCATTCCACGCAGTGCACTGCCCATaGAAAGGCCCTGGGGCAGGACTGTACCTGGCATGT +
Preference number: 3 (lower is better)
Translates to: VRGTAFHAVHCP*KGPGAGLYLAC
Trigger: ACATGCCAGGTACAGTCCTGCCCCAGGGCCTTTGCATGGGCAGTGCACTGCGTGGAATGCTGTTCCCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR CCA 72 bp TCACAGCAGGCCTCTGCTGTTGCTGTGTGCTCTGCCTaGACCAGCCTCCCGCTGGGTACACATGGAAAAGCC +
Preference number: 3 (lower is better)
Translates to: SQQASAVAVCSA*TSLPLGTHGKA
Trigger: GGCTTTTCCATGTGTACCCAGCGGGAGGCTGGTCCAGGCAGAGCACACAGCAACAGCAGAGGCCTGCTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR CCA 72 bp AGGGCCAGGCCGGTGTTCTTGGAGCCTTGTCTCTGCTaGGGATGTGTCTCCAGGGATGGATTCTCGGGAAGC +
Preference number: 3 (lower is better)
Translates to: RARPVFLEPCLC*GCVSRDGFSGS
Trigger: GCTTCCCGAGAATCCATCCCTGGAGACACATCCCCAGCAGAGACAAGGCTCCAAGAACACCGGCCTGGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR TCA 72 bp CAGAGACAGGGGGTGACCTTGGTGACCTGTGTCCTCTaGCAAGGCACACAGAAGGAAGGCGGCACAGAGCGA +
Preference number: 3 (lower is better)
Translates to: QRQGVTLVTCVL*QGTQKEGGTER
Trigger: TCGCTCTGTGCCGCCTTCCTTCTGTGTGCCTTGTCAGAGGACACAGGTCACCAAGGTCACCCCCTGTCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR GCA 72 bp CCCTCGAGTGGATGCGATGCCCGTGAGTGGATGGGATaGCTGCAGGGAGGTGGAATCGTCTTTCTTTGTGGG +
Preference number: 3 (lower is better)
Translates to: PSSGCDAREWMG*LQGGGIVFLCG
Trigger: CCCACAAAGAAAGACGATTCCACCTCCCTGCAGGCATCCCATCCACTCACGGGCATCGCATCCACTCGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR CCA 72 bp CGGTGCCCTCGAGTGGATGCGATGCCCGTGAGTGGATaGGATGCCTGCAGGGAGGTGGAATCGTCTTTCTTT +
Preference number: 3 (lower is better)
Translates to: RCPRVDAMPVSG*DACREVESSFF
Trigger: AAAGAAAGACGATTCCACCTCCCTGCAGGCATCCCATCCACTCACGGGCATCGCATCCACTCGAGGGCACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR CCA 72 bp AGACACAGAATTTATTTCTGGACGCATTCTGCAGGCTaGAGGTCCCGGCAGGCACAGGGCTCACACCTTGGG +
Preference number: 3 (lower is better)
Translates to: RHRIYFWTHSAG*RSRQAQGSHLG
Trigger: CCCAAGGTGTGAGCCCTGTGCCTGCCGGGACCTCCAGCCTGCAGAATGCGTCCAGAAATAAATTCTGTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR-3UTR CAA 90 bp GAAGTTCAAGGTAAACTCAGGAAGGGTCCCCCACAGCCCCTCAGGGAGCCTGCTAGGTTTGGGGCTGTATaGCCCATTCCTAGAAGCCAT +
Preference number: 3 (lower is better)
Translates to: EVQGKLRKGPPQPLREPARFGAV*PIPRSH
Trigger: ATGGCTTCTAGGAATGGGCAATACAGCCCCAAACCT...AGCAGGCTCCCTGAGGGGCTGTGGGGGACCCTTCCTGAGTTTACCTTGAACTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR-3UTR CAA 90 bp GGAACCTGCCATTCATCACTCCCAACATGCCAGGCCAGAGCGGCTGAGCTGCAAAGGCTGCTTTACTTCTaGTCCGGGATGGAACAGAGA +
Preference number: 3 (lower is better)
Translates to: GTCHSSLPTCQARAAELQRLLYF*SGMEQR
Trigger: TCTCTGTTCCATCCCGGACAAGAAGTAAAGCAGCCT...TTGCAGCTCAGCCGCTCTGGCCTGGCATGTTGGGAGTGATGAATGGCAGGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR CCA 72 bp GGGATGCCTGCAGGGAGGTGGAATCGTCTTTCTTTGTaGGGCATCTCTGAGGGGCCCTTATTCCCATTTACC +
Preference number: 3 (lower is better)
Translates to: GMPAGRWNRLSL*GISEGPLFPFT
Trigger: GGTAAATGGGAATAAGGGCCCCTCAGAGATGCCCCACAAAGAAAGACGATTCCACCTCCCTGCAGGCATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR CCA 72 bp AGTCTTTCCTCCTGTCCAGCCTTCGGTGTCCTTGGCTaGAGGTTTGGGGCTGTATTGCCCATTCCTAGAAGC +
Preference number: 3 (lower is better)
Translates to: SLSSCPAFGVLG*RFGAVLPIPRS
Trigger: GCTTCTAGGAATGGGCAATACAGCCCCAAACCTCCAGCCAAGGACACCGAAGGCTGGACAGGAGGAAAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR TCA 72 bp AGGGAGGTGGAATCGTCTTTCTTTGTGGGGCATCTCTaGGGGGCCCTTATTCCCATTTACCAGGTGGGAAAG +
Preference number: 3 (lower is better)
Translates to: REVESSFFVGHL*GALIPIYQVGK
Trigger: CTTTCCCACCTGGTAAATGGGAATAAGGGCCCCTCAGAGATGCCCCACAAAGAAAGACGATTCCACCTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR TCA 72 bp AGGTGCTTAAGCAGCAGCAGCAGCTGTCGCTATGACTaGAATGGCTGGTGTTCAAGAAGGCTGCTTTACTTC +
Preference number: 3 (lower is better)
Translates to: RCLSSSSSCRYD*NGWCSRRLLYF
Trigger: GAAGTAAAGCAGCCTTCTTGAACACCAGCCATTTCAGTCATAGCGACAGCTGCTGCTGCTGCTTAAGCACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR GCA 72 bp GTCGCTATGACTGAAATGGCTGGTGTTCAAGAAGGCTaGTTTACTTCTTGTCCGGGATGGAACAGAGAGGGT +
Preference number: 3 (lower is better)
Translates to: VAMTEMAGVQEG*FTSCPGWNREG
Trigger: ACCCTCTCTGTTCCATCCCGGACAAGAAGTAAAGCAGCCTTCTTGAACACCAGCCATTTCAGTCATAGCGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR GCA 90 bp GGGCTCGGCCGGACCAAGACGCTCCACGCCCTGGCCGGTGCCCACCCTGGGAGCCGGGGGCAGCTCCCCTaGAGGGCTCCAGGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GLGRTKTLHALAGAHPGSRGQLP*RAPGAG
Trigger: CCCTGCACCTGGAGCCCTGCAGGGGAGCTGCCCCCG...GCTCCCAGGGTGGGCACCGGCCAGGGCGTGGAGCGTCTTGGTCCGGCCGAGCCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR CCA 90 bp CGCCCGGGTCCACACTGCCCAGCAGGCCGTGCTGTGGTGGGCGCTGCCCCCTGCGGAGGCACCTGGGGCTaGGAGGTGCGAAGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: RPGPHCPAGRAVVGAAPCGGTWG*EVRRGV
Trigger: CACGCCCCTTCGCACCTCCCAGCCCCAGGTGCCTCC...GCAGGGGGCAGCGCCCACCACAGCACGGCCTGCTGGGCAGTGTGGACCCGGGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CCA 90 bp CGCCCGGGTCCACACTGCCCAGCAGGCCGTGCTGTGGTGGGCGCTGCCCCCTGCCTCCACTACCCAGGGTaGGCCTCAGCGCGCGCATCC +
Preference number: 4 (lower is better)
Translates to: RPGPHCPAGRAVVGAAPCLHYPG*ASARAS
Trigger: GGATGCGCGCGCTGAGGCCCACCCTGGGTAGTGGAG...GCAGGGGGCAGCGCCCACCACAGCACGGCCTGCTGGGCAGTGTGGACCCGGGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR GCA 90 bp GTGCTGTGGTGGGCGCTGCCCCCTGCCGGCCGCAGTAGAGACAGAGGCCGGTGCTGCTGTGGTGGGCGCTaGCCCCTGCCGGCCGCAGTA +
Preference number: 4 (lower is better)
Translates to: VLWWALPPAGRSRDRGRCCCGGR*PLPAAV
Trigger: TACTGCGGCCGGCAGGGGGCAGCGCCCACCACAGCA...GCACCGGCCTCTGTCTCTACTGCGGCCGGCAGGGGGCAGCGCCCACCACAGCAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR GCA 90 bp CTGCGCCAACCCTGGCGGCTAGCCCGGAATGGGCTGGGTGGGCGGCGAGCACAGCGCCCGGGTCCACACTaGCCAGCAGGCCGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: LRQPWRLARNGLGGRRAQRPGPH*PAGRAV
Trigger: CACAGCACGGCCTGCTGGGCAGTGTGGACCCGGGCG...CTGTGCTCGCCGCCCACCCAGCCCATTCCGGGCTAGCCGCCAGGGTTGGCGCAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR GCA 90 bp GGGCTCGGCCGGACCAAGACGCTCCACGCCCTGGCCGGTGCCCACCCTGGGAGCGAGGGGGCCACTCACTaGGTGCTCCCAGAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: GLGRTKTLHALAGAHPGSEGATH*VLPESG
Trigger: GCCTGACTCTGGGAGCACGCAGTGAGTGGCCCCCTC...GCTCCCAGGGTGGGCACCGGCCAGGGCGTGGAGCGTCTTGGTCCGGCCGAGCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR CCA 90 bp CGCCCGGGTCCACACTGCCCAGCAGGCCGTGCTGTGGTGGGCGCTGCCCCCTGCTCCCAGAAGCGGCCATaGTGCAGGGCTGAGGGTGAC +
Preference number: 4 (lower is better)
Translates to: RPGPHCPAGRAVVGAAPCSQKRP*CRAEGD
Trigger: GTCACCCTCAGCCCTGCACCATGGCCGCTTCTGGGA...GCAGGGGGCAGCGCCCACCACAGCACGGCCTGCTGGGCAGTGTGGACCCGGGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CCA 90 bp CCTGGGGATGACCGCCCGGGTCCACACTGCCCAGCAGGCCGTGCTGTGGTGGGCGGGCGGAGGCCTGCGTaGAACCAGTCCCAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: PGDDRPGPHCPAGRAVVGGRRPA*NQSQKR
Trigger: CCGCTTCTGGGACTGGTTCCACGCAGGCCTCCGCCC...GCCCACCACAGCACGGCCTGCTGGGCAGTGTGGACCCGGGCGGTCATCCCCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CCA 90 bp GTGCTGTGGTGGGCGCTGCCCCCTGCCGGCCGCAGTAGAGACAGAGGCCGGTGCCCGGAATGGGCTGGGTaGGCGGCGAGCACAGCTCCT +
Preference number: 4 (lower is better)
Translates to: VLWWALPPAGRSRDRGRCPEWAG*AASTAP
Trigger: AGGAGCTGTGCTCGCCGCCCACCCAGCCCATTCCGG...GCACCGGCCTCTGTCTCTACTGCGGCCGGCAGGGGGCAGCGCCCACCACAGCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CCA 90 bp GGAGGTGATGTCAGGCCCGGGTGGGGCTCGGCCGGACCAAGACGCTCCACGCCCGATGTCAGGCCCGGGTaGGGCTCGGCCGGACCAAGA +
Preference number: 4 (lower is better)
Translates to: GGDVRPGWGSAGPRRSTPDVRPG*GSAGPR
Trigger: TCTTGGTCCGGCCGAGCCCCACCCGGGCCTGACATC...GGGCGTGGAGCGTCTTGGTCCGGCCGAGCCCCACCCGGGCCTGACATCACCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR TCA 90 bp GTGCTGTGGTGGGCGCTGCCCCCTGCCGGCCGCAGTAGAGACAGAGGCCGGTGCACCAGGTGGGAAAGCTaGGGCCTGGGTGCTGCCGTC +
Preference number: 4 (lower is better)
Translates to: VLWWALPPAGRSRDRGRCTRWES*GLGAAV
Trigger: GACGGCAGCACCCAGGCCTCAGCTTTCCCACCTGGT...GCACCGGCCTCTGTCTCTACTGCGGCCGGCAGGGGGCAGCGCCCACCACAGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR GCA 90 bp GGAGGTGATGTCAGGCCCGGGTGGGGCTCGGCCGGACCAAGACGCTCCACGCCCGGGCCACTCACTGCGTaGTCCCAGAGTCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GGDVRPGWGSAGPRRSTPGPLTA*SQSQAS
Trigger: GGAGGCCTGACTCTGGGAGCACGCAGTGAGTGGCCC...GGGCGTGGAGCGTCTTGGTCCGGCCGAGCCCCACCCGGGCCTGACATCACCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR CCA 90 bp GTGCTGTGGTGGGCGCTGCCCCCTGCCGGCCGCAGTAGAGACAGAGGCCGGTGCCCCAGGCACCTCTCCTaGACCAGGAGGCCCCTGATC +
Preference number: 4 (lower is better)
Translates to: VLWWALPPAGRSRDRGRCPRHLS*TRRPLI
Trigger: GATCAGGGGCCTCCTGGTCCAGGAGAGGTGCCTGGG...GCACCGGCCTCTGTCTCTACTGCGGCCGGCAGGGGGCAGCGCCCACCACAGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR TCA 90 bp CTGCGCCAACCCTGGCGGCTAGCCCGGAATGGGCTGGGTGGGCGGCGAGCACAGTGTGTGGGGTGGGAGTaGCGTCAGCCCTCCACAACC +
Preference number: 4 (lower is better)
Translates to: LRQPWRLARNGLGGRRAQCVGWE*RQPSTT
Trigger: GGTTGTGGAGGGCTGACGTCACTCCCACCCCACACA...CTGTGCTCGCCGCCCACCCAGCCCATTCCGGGCTAGCCGCCAGGGTTGGCGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR GCA 90 bp GGCGAGCACAGCTCCTGGTCTGAGCCGTCGGCTCCCTTGAACACAGGGAGGCACCCCTGCCCCTCTGGGTaGGGGGTGGGTGTGTCCGCC +
Preference number: 4 (lower is better)
Translates to: GEHSSWSEPSAPLNTGRHPCPSG*GVGVSA
Trigger: GGCGGACACACCCACCCCGCACCCAGAGGGGCAGGG...GTGCCTCCCTGTGTTCAAGGGAGCCGACGGCTCAGACCAGGAGCTGTGCTCGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR GCA 90 bp CCTGGGGATGACCGCCCGGGTCCACACTGCCCAGCAGGCCGTGCTGTGGTGGGCCCATCACTTCCCGGCTaGGGTGGGCAGGATGCATGG +
Preference number: 4 (lower is better)
Translates to: PGDDRPGPHCPAGRAVVGPSLPG*GGQDAW
Trigger: CCATGCATCCTGCCCACCGCAGCCGGGAAGTGATGG...GCCCACCACAGCACGGCCTGCTGGGCAGTGTGGACCCGGGCGGTCATCCCCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CCA 90 bp CGCCCGGGTCCACACTGCCCAGCAGGCCGTGCTGTGGTGGGCGCTGCCCCCTGCCAGCGCGCGCATCCGTaGAAGAGGGCTAAGAGATCT +
Preference number: 4 (lower is better)
Translates to: RPGPHCPAGRAVVGAAPCQRAHP*KRAKRS
Trigger: AGATCTCTTAGCCCTCTTCCACGGATGCGCGCGCTG...GCAGGGGGCAGCGCCCACCACAGCACGGCCTGCTGGGCAGTGTGGACCCGGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CCA 90 bp CCTGGGGATGACCGCCCGGGTCCACACTGCCCAGCAGGCCGTGCTGTGGTGGGCCCTCAGGGAGCCTGCTaGGACCGATGTTCCAGACGG +
Preference number: 4 (lower is better)
Translates to: PGDDRPGPHCPAGRAVVGPQGAC*DRCSRR
Trigger: CCGTCTGGAACATCGGTCCCAGCAGGCTCCCTGAGG...GCCCACCACAGCACGGCCTGCTGGGCAGTGTGGACCCGGGCGGTCATCCCCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CCA 90 bp GGGCTCGGCCGGACCAAGACGCTCCACGCCCTGGCCGGTGCCCACCCTGGGAGCCGTAGTTGTGCGCTGTaGGAGTGGGGAGGTGATGTC +
Preference number: 4 (lower is better)
Translates to: GLGRTKTLHALAGAHPGSRSCAL*EWGGDV
Trigger: GACATCACCTCCCCACTCCCACAGCGCACAACTACG...GCTCCCAGGGTGGGCACCGGCCAGGGCGTGGAGCGTCTTGGTCCGGCCGAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR GCA 90 bp GGGCGGAGGCCTGCGTGGAACCAGTCCCAGAAGCGGCCATGGTGCAGGGCTGAGCAGGGGGCGGAGGCCTaGGTGGAACCAGTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: GRRPAWNQSQKRPWCRAEQGAEA*VEPVPE
Trigger: TTCTGGGACTGGTTCCACGCAGGCCTCCGCCCCCTG...CTCAGCCCTGCACCATGGCCGCTTCTGGGACTGGTTCCACGCAGGCCTCCGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CCA 90 bp CGCCCGGGTCCACACTGCCCAGCAGGCCGTGCTGTGGTGGGCGCTGCCCCCTGCGACTCTATTAGGGCTTaGACAGGTGTCAGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: RPGPHCPAGRAVVGAAPCDSIRA*TGVRAP
Trigger: AGGGGCCCTGACACCTGTCCAAGCCCTAATAGAGTC...GCAGGGGGCAGCGCCCACCACAGCACGGCCTGCTGGGCAGTGTGGACCCGGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418389.6
3UTR CAA 72 bp GGCGAGCACAGCTCCTGGTCTGAGCCGTCGGCTCCCTaGAACACAGGGAGGCACCTGGGGCTGGGAGGTGCG +
Preference number: 4 (lower is better)
Translates to: GEHSSWSEPSAP*NTGRHLGLGGA
Trigger: CGCACCTCCCAGCCCCAGGTGCCTCCCTGTGTTCAAGGGAGCCGACGGCTCAGACCAGGAGCTGTGCTCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR TCA 90 bp GGGCTCGGCCGGACCAAGACGCTCCACGCCCTGGCCGGTGCCCACCCTGGGAGCGTGACCTGTGTCCTCTaGCAAGGCACACAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: GLGRTKTLHALAGAHPGSVTCVL*QGTQKE
Trigger: TTCCTTCTGTGTGCCTTGTCAGAGGACACAGGTCAC...GCTCCCAGGGTGGGCACCGGCCAGGGCGTGGAGCGTCTTGGTCCGGCCGAGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR TCA 90 bp GCCAGGCCACGCATCTGTCCCGTGGTCTGTGTACCGAGGAGCCCCGACAGTGCCCCAGGCCAGAGCGGCTaGGCTGCAAGAGGGCTCGTT +
Preference number: 4 (lower is better)
Translates to: ARPRICPVVCVPRSPDSAPGQSG*AARGLV
Trigger: AACGAGCCCTCTTGCAGCTCAGCCGCTCTGGCCTGG...GGCACTGTCGGGGCTCCTCGGTACACAGACCACGGGACAGATGCGTGGCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR GCA 90 bp CCTGGGGATGACCGCCCGGGTCCACACTGCCCAGCAGGCCGTGCTGTGGTGGGCTGCGGTGGCAATCGGTaGCATCGGGGATATCCCAGT +
Preference number: 4 (lower is better)
Translates to: PGDDRPGPHCPAGRAVVGCGGNR*HRGYPS
Trigger: ACTGGGATATCCCCGATGGCACCGATTGCCACCGCA...GCCCACCACAGCACGGCCTGCTGGGCAGTGTGGACCCGGGCGGTCATCCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CCA 90 bp GTGCTGTGGTGGGCGCTGCCCCCTGCCGGCCGCAGTAGAGACAGAGGCCGGTGCAGCCTTCGGTGTCCTTaGCTGGAGGTTTGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: VLWWALPPAGRSRDRGRCSLRCP*LEVWGC
Trigger: ACAGCCCCAAACCTCCAGCCAAGGACACCGAAGGCT...GCACCGGCCTCTGTCTCTACTGCGGCCGGCAGGGGGCAGCGCCCACCACAGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR GCA 90 bp GTGCTGTGGTGGGCGCTGCCCCCTGCCGGCCGCAGTAGAGACAGAGGCCGGTGCTGGTGCTGTAGGCTTTaGGGTGGCAATCGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: VLWWALPPAGRSRDRGRCWCCRL*GGNRCH
Trigger: ATGGCACCGATTGCCACCGCAAAGCCTACAGCACCA...GCACCGGCCTCTGTCTCTACTGCGGCCGGCAGGGGGCAGCGCCCACCACAGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR GCA 90 bp GTGCTGTGGTGGGCGCTGCCCCCTGCCGGCCGCAGTAGAGACAGAGGCCGGTGCAGTGAGATCCTGTCTTaGGTGCTCCCAGAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: VLWWALPPAGRSRDRGRCSEILS*VLPESG
Trigger: GCCTGACTCTGGGAGCACGCAAGACAGGATCTCACT...GCACCGGCCTCTGTCTCTACTGCGGCCGGCAGGGGGCAGCGCCCACCACAGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR GCA 90 bp CGCCCGGGTCCACACTGCCCAGCAGGCCGTGCTGTGGTGGGCGCTGCCCCCTGCGGTTTGGGGCTGTATTaGCCATTCCTAGAAGCCATC +
Preference number: 4 (lower is better)
Translates to: RPGPHCPAGRAVVGAAPCGLGLY*PFLEAI
Trigger: GATGGCTTCTAGGAATGGGCAATACAGCCCCAAACC...GCAGGGGGCAGCGCCCACCACAGCACGGCCTGCTGGGCAGTGTGGACCCGGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CCA 90 bp GGGCGGAGGCCTGCGTGGAACCAGTCCCAGAAGCGGCCATGGTGCAGGGCTGAGATCTGGTACAGGGTTTaGGCCGCACACGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: GRRPAWNQSQKRPWCRAEIWYRV*AAHGPG
Trigger: TCCAGGCCCGTGTGCGGCCCAAACCCTGTACCAGAT...CTCAGCCCTGCACCATGGCCGCTTCTGGGACTGGTTCCACGCAGGCCTCCGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CCA 90 bp CAGCGCGCGCATCCGTGGAAGAGGGCTAAGAGATCTGGTACAGGGTTTGGGCCGGGCCTGCGCCAACCCTaGCGGCTAGCCCGGAATGGG +
Preference number: 4 (lower is better)
Translates to: QRAHPWKRAKRSGTGFGPGLRQP*RLARNG
Trigger: CCCATTCCGGGCTAGCCGCCAGGGTTGGCGCAGGCC...CGGCCCAAACCCTGTACCAGATCTCTTAGCCCTCTTCCACGGATGCGCGCGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CCA 90 bp CAGGGCCAGGCCACGCATCTGTCCCGTGGTCTGTGTACCGAGGAGCCCCGACAGGTGAGGAGGCCCGTGTaGCTGGAGCAGAGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: QGQATHLSRGLCTEEPRQVRRPV*LEQSEE
Trigger: CTCCTCACTCTGCTCCAGCCACACGGGCCTCCTCAC...CTGTCGGGGCTCCTCGGTACACAGACCACGGGACAGATGCGTGGCCTGGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR TCA 90 bp GTGCTGTGGTGGGCGCTGCCCCCTGCCGGCCGCAGTAGAGACAGAGGCCGGTGCCGACAGCAGCTGCAGTaGACGTGTATTGTCCAACCT +
Preference number: 4 (lower is better)
Translates to: VLWWALPPAGRSRDRGRCRQQLQ*TCIVQP
Trigger: AGGTTGGACAATACACGTTCACTGCAGCTGCTGTCG...GCACCGGCCTCTGTCTCTACTGCGGCCGGCAGGGGGCAGCGCCCACCACAGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR TCA 90 bp GTTGCTTCCCAGCAGGAACCCAGGCTGTGGGTCCTCATCCCGCCCCACACTGACCATCCCGCCCCACACTaGCTTCCCCCTGCGAGGACA +
Preference number: 4 (lower is better)
Translates to: VASQQEPRLWVLIPPHTDHPAPH*LPPART
Trigger: TGTCCTCGCAGGGGGAAGTCAGTGTGGGGCGGGATG...GTCAGTGTGGGGCGGGATGAGGACCCACAGCCTGGGTTCCTGCTGGGAAGCAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR GCA 90 bp GCCAGGCCACGCATCTGTCCCGTGGTCTGTGTACCGAGGAGCCCCGACAGTGCCCCAGAGCGGCTGAGCTaGAAGAGGGCTCGTTCACTC +
Preference number: 4 (lower is better)
Translates to: ARPRICPVVCVPRSPDSAPERLS*KRARSL
Trigger: GAGTGAACGAGCCCTCTTGCAGCTCAGCCGCTCTGG...GGCACTGTCGGGGCTCCTCGGTACACAGACCACGGGACAGATGCGTGGCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR CCA 90 bp GTGATGTCAGGCCCGGGTGGGGCTCGGCCGGACCAAGACGCTCCACGCCCTGGCACAGGGCTCACACCTTaGGTTTTGCAAACACCTCCC +
Preference number: 4 (lower is better)
Translates to: VMSGPGGARPDQDAPRPGTGLTP*VLQTPP
Trigger: GGGAGGTGTTTGCAAAACCCAAGGTGTGAGCCCTGT...GCCAGGGCGTGGAGCGTCTTGGTCCGGCCGAGCCCCACCCGGGCCTGACATCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR CCA 90 bp ACAGACAAGGCCTGGAGTGCGGAGGAAGGGATGGAATCTGACGCCTGTGGTCACGCGGCTAGCCCGGAATaGGCTGGGTGGGCGGCGAGC +
Preference number: 4 (lower is better)
Translates to: TDKAWSAEEGMESDACGHAASPE*AGWAAS
Trigger: GCTCGCCGCCCACCCAGCCCATTCCGGGCTAGCCGC...GTGACCACAGGCGTCAGATTCCATCCCTTCCTCCGCACTCCAGGCCTTGTCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CCA 90 bp ACAGACAAGGCCTGGAGTGCGGAGGAAGGGATGGAATCTGACGCCTGTGGTCACCGAGGTGGGGGCGCCTaGCAGGCCTGCGCCAACCCT +
Preference number: 4 (lower is better)
Translates to: TDKAWSAEEGMESDACGHRGGGA*QACANP
Trigger: AGGGTTGGCGCAGGCCTGCCAGGCGCCCCCACCTCG...GTGACCACAGGCGTCAGATTCCATCCCTTCCTCCGCACTCCAGGCCTTGTCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CCA 90 bp TGTTGCTGTGTGCTCTGCCTGGACCAGCCTCCCGCTGGGTACACATGGAAAAGCGTCCTGCAGGCGAGGTaGGGGCGCCTGGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: CCCVLCLDQPPAGYTWKSVLQAR*GRLAGL
Trigger: CAGGCCTGCCAGGCGCCCCCACCTCGCCTGCAGGAC...GCTTTTCCATGTGTACCCAGCGGGAGGCTGGTCCAGGCAGAGCACACAGCAACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CCA 90 bp CAGGGCCAGGCCACGCATCTGTCCCGTGGTCTGTGTACCGAGGAGCCCCGACAGCACGCATCTGTCCCGTaGTCTGTGTACCGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: QGQATHLSRGLCTEEPRQHASVP*SVYRGA
Trigger: GGCTCCTCGGTACACAGACCACGGGACAGATGCGTG...CTGTCGGGGCTCCTCGGTACACAGACCACGGGACAGATGCGTGGCCTGGCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR TCA 90 bp GGGCGGAGGCCTGCGTGGAACCAGTCCCAGAAGCGGCCATGGTGCAGGGCTGAGGGGATATCCCAGTACTaGCGAAAAACCTTCGGCGCC +
Preference number: 4 (lower is better)
Translates to: GRRPAWNQSQKRPWCRAEGISQY*RKTFGA
Trigger: GGCGCCGAAGGTTTTTCGTCAGTACTGGGATATCCC...CTCAGCCCTGCACCATGGCCGCTTCTGGGACTGGTTCCACGCAGGCCTCCGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR TCA 90 bp CAGCGCGCGCATCCGTGGAAGAGGGCTAAGAGATCTGGTACAGGGTTTGGGCCGTGGGAGGCTGAGGTGTaGGGACTGCTCGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: QRAHPWKRAKRSGTGFGPWEAEV*GLLEAR
Trigger: CCTGGCCTCGAGCAGTCCTCACACCTCAGCCTCCCA...CGGCCCAAACCCTGTACCAGATCTCTTAGCCCTCTTCCACGGATGCGCGCGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR TCA 90 bp GTTGCTTCCCAGCAGGAACCCAGGCTGTGGGTCCTCATCCCGCCCCACACTGACGGCACCGGGCCATGGTaGCACATCGGTGTGTCTCAG +
Preference number: 4 (lower is better)
Translates to: VASQQEPRLWVLIPPHTDGTGPW*HIGVSQ
Trigger: CTGAGACACACCGATGTGTCACCATGGCCCGGTGCC...GTCAGTGTGGGGCGGGATGAGGACCCACAGCCTGGGTTCCTGCTGGGAAGCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR GCA 90 bp ACACAGGGAGGCACCTGGGGCTGGGAGGTGCGAAGGGGCGTGCGGCCTTTAAATGCCCCTCAGGGAGCCTaGTGGGACCGATGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: TQGGTWGWEVRRGVRPLNAPQGA*WDRCSR
Trigger: TCTGGAACATCGGTCCCAGCAGGCTCCCTGAGGGGC...ATTTAAAGGCCGCACGCCCCTTCGCACCTCCCAGCCCCAGGTGCCTCCCTGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR GCA 90 bp CAGCGCGCGCATCCGTGGAAGAGGGCTAAGAGATCTGGTACAGGGTTTGGGCCGTCCCCAGGGAGGCTCTaGCCCTCCTCAGTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: QRAHPWKRAKRSGTGFGPSPGRL*PSSVPA
Trigger: GGCTGGAACTGAGGAGGGGCAGAGCCTCCCTGGGGA...CGGCCCAAACCCTGTACCAGATCTCTTAGCCCTCTTCCACGGATGCGCGCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR GCA 90 bp CAGGTCAGGGAGGGCCACAGTAGGTGCTTAAGCAGCAGCAGCAGCTGTCGCTATCCTGCGAGGACACCGTaGTGCCCCCAGCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QVREGHSRCLSSSSSCRYPARTP*CPQLGL
Trigger: CAGCCCCAGCTGGGGGCAGCACGGTGTCCTCGCAGG...ATAGCGACAGCTGCTGCTGCTGCTTAAGCACCTACTGTGGCCCTCCCTGACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR CCA 90 bp GGGCGGAGGCCTGCGTGGAACCAGTCCCAGAAGCGGCCATGGTGCAGGGCTGAGCGACGCTGGCAATACTaGTGGTGCTGTAGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: GRRPAWNQSQKRPWCRAERRWQY*WCCRLC
Trigger: GCAAAGCCTACAGCACCACCAGTATTGCCAGCGTCG...CTCAGCCCTGCACCATGGCCGCTTCTGGGACTGGTTCCACGCAGGCCTCCGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CCA 90 bp GGGACAAGGCCTCCCCAAGGTCTTGACGCAGAGACAGCAGTGACGGCGTACGCCACGCATTCTGCAGGCTaGAGGTCCCGGCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: GTRPPQGLDAETAVTAYATHSAG*RSRQAQ
Trigger: CTGTGCCTGCCGGGACCTCCAGCCTGCAGAATGCGT...GGCGTACGCCGTCACTGCTGTCTCTGCGTCAAGACCTTGGGGAGGCCTTGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR CCA 90 bp CGTGAGTGGATGGGATGCCTGCAGGGAGGTGGAATCGTCTTTCTTTGTGGGGCACAGCAGGCCGTGCTGTaGTGGGCGCTGCCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: REWMGCLQGGGIVFLCGAQQAVL*WALPPA
Trigger: GGCAGGGGGCAGCGCCCACCACAGCACGGCCTGCTG...TGCCCCACAAAGAAAGACGATTCCACCTCCCTGCAGGCATCCCATCCACTCACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CCA 90 bp GGGCGGAGGCCTGCGTGGAACCAGTCCCAGAAGCGGCCATGGTGCAGGGCTGAGCCTTGGCTGGAGGTTTaGGGCTGTATTGCCCATTCC +
Preference number: 4 (lower is better)
Translates to: GRRPAWNQSQKRPWCRAEPWLEV*GCIAHS
Trigger: GGAATGGGCAATACAGCCCCAAACCTCCAGCCAAGG...CTCAGCCCTGCACCATGGCCGCTTCTGGGACTGGTTCCACGCAGGCCTCCGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CCA 90 bp GGCGAGCACAGCTCCTGGTCTGAGCCGTCGGCTCCCTTGAACACAGGGAGGCACCCAGGCCGGTGTTCTTaGAGCCTTGTCTCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GEHSSWSEPSAPLNTGRHPGRCS*SLVSAG
Trigger: CCCAGCAGAGACAAGGCTCCAAGAACACCGGCCTGG...GTGCCTCCCTGTGTTCAAGGGAGCCGACGGCTCAGACCAGGAGCTGTGCTCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CCA 90 bp GGGCGGAGGCCTGCGTGGAACCAGTCCCAGAAGCGGCCATGGTGCAGGGCTGAGCTGTGTTGGCCAGGGTaGTCTGAAACTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: GRRPAWNQSQKRPWCRAELCWPG*SETPDL
Trigger: GAGGTCAGGAGTTTCAGACCACCCTGGCCAACACAG...CTCAGCCCTGCACCATGGCCGCTTCTGGGACTGGTTCCACGCAGGCCTCCGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CCA 90 bp AGCCTCCGGGCCAGAGGAGGAAGGAGGTGTGTCCCCACACACCAGGACCTAAAGGGGCGGCGGGGATGCTaGCTTGTACACAGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: SLRARGGRRCVPTHQDLKGRRGC*LVHRVV
Trigger: GACCACCCTGTGTACAAGCCAGCATCCCCGCCGCCC...CTTTAGGTCCTGGTGTGTGGGGACACACCTCCTTCCTCCTCTGGCCCGGAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR TCA 90 bp AGGCCACGCATCTGTCCCGTGGTCTGTGTACCGAGGAGCCCCGACAGTGCCCCCGGGATATCCCAGTACTaGCGAAAAACCTTCGGCGCC +
Preference number: 4 (lower is better)
Translates to: RPRICPVVCVPRSPDSAPGISQY*RKTFGA
Trigger: GGCGCCGAAGGTTTTTCGTCAGTACTGGGATATCCC...GGGGGCACTGTCGGGGCTCCTCGGTACACAGACCACGGGACAGATGCGTGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR TCA 90 bp CCGGGCCATGGTGACACATCGGTGTGTCTCAGTCTCTCCTTTGCCCATGGATGCCCAGCCGGCCCATCTTaGCCAGGGAGGCCGCTATGC +
Preference number: 4 (lower is better)
Translates to: PGHGDTSVCLSLSFAHGCPAGPS*PGRPLC
Trigger: GCATAGCGGCCTCCCTGGTCAAGATGGGCCGGCTGG...GCATCCATGGGCAAAGGAGAGACTGAGACACACCGATGTGTCACCATGGCCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR TCA 90 bp AGGCCACGCATCTGTCCCGTGGTCTGTGTACCGAGGAGCCCCGACAGTGCCCCCGGGACTCACACTCTTTaGAGAGAGACAGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RPRICPVVCVPRSPDSAPGTHTL*RETGRL
Trigger: CAGCCTCCCTGTCTCTCTTCAAAGAGTGTGAGTCCC...GGGGGCACTGTCGGGGCTCCTCGGTACACAGACCACGGGACAGATGCGTGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR TCA 90 bp AGGGCCAGGCCACGCATCTGTCCCGTGGTCTGTGTACCGAGGAGCCCCGACAGTTGGAGATGTGGAAACTaGTGCACAGAGGGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: RARPRICPVVCVPRSPDSWRCGN*CTEGGR
Trigger: CCGGCCTCCCTCTGTGCATCAGTTTCCACATCTCCA...ACTGTCGGGGCTCCTCGGTACACAGACCACGGGACAGATGCGTGGCCTGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR GCA 90 bp AGGGCCAGGCCACGCATCTGTCCCGTGGTCTGTGTACCGAGGAGCCCCGACAGTTGCGGTGGCAATCGGTaGCATCGGGGATATCCCAGT +
Preference number: 4 (lower is better)
Translates to: RARPRICPVVCVPRSPDSCGGNR*HRGYPS
Trigger: ACTGGGATATCCCCGATGGCACCGATTGCCACCGCA...ACTGTCGGGGCTCCTCGGTACACAGACCACGGGACAGATGCGTGGCCTGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR GCA 90 bp GGGCGGAGGCCTGCGTGGAACCAGTCCCAGAAGCGGCCATGGTGCAGGGCTGAGACGCGTGGACATCTGTaGTCTCTCCAGAGAGGACTT +
Preference number: 4 (lower is better)
Translates to: GRRPAWNQSQKRPWCRAETRGHL*SLQRGL
Trigger: AAGTCCTCTCTGGAGAGAGCACAGATGTCCACGCGT...CTCAGCCCTGCACCATGGCCGCTTCTGGGACTGGTTCCACGCAGGCCTCCGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR GCA 90 bp GGCGAGCACAGCTCCTGGTCTGAGCCGTCGGCTCCCTTGAACACAGGGAGGCACCTCACAGCAGGCCTCTaGTGTTGCTGTGTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: GEHSSWSEPSAPLNTGRHLTAGL*CCCVLC
Trigger: GCAGAGCACACAGCAACAGCAGAGGCCTGCTGTGAG...GTGCCTCCCTGTGTTCAAGGGAGCCGACGGCTCAGACCAGGAGCTGTGCTCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR GCA 90 bp CAGCGCGCGCATCCGTGGAAGAGGGCTAAGAGATCTGGTACAGGGTTTGGGCCGAGCAAGTGTGTGCCCTaGAGCCCCCAGGCACCTCTC +
Preference number: 4 (lower is better)
Translates to: QRAHPWKRAKRSGTGFGPSKCVP*SPQAPL
Trigger: GAGAGGTGCCTGGGGGCTGCAGGGCACACACTTGCT...CGGCCCAAACCCTGTACCAGATCTCTTAGCCCTCTTCCACGGATGCGCGCGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR GCA 90 bp AGCCTCCGGGCCAGAGGAGGAAGGAGGTGTGTCCCCACACACCAGGACCTAAAGTTCTCCAGGCTCTCCTaGTCCGAAGCCTCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: SLRARGGRRCVPTHQDLKFSRLS*SEASGP
Trigger: TGGCCCGGAGGCTTCGGAGCAGGAGAGCCTGGAGAA...CTTTAGGTCCTGGTGTGTGGGGACACACCTCCTTCCTCCTCTGGCCCGGAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR GCA 90 bp AGCCTCCGGGCCAGAGGAGGAAGGAGGTGTGTCCCCACACACCAGGACCTAAAGGGCCGGAGTCCAGGTTaGTTCCCAGCAGGAACCCAG +
Preference number: 4 (lower is better)
Translates to: SLRARGGRRCVPTHQDLKGRSPG*FPAGTQ
Trigger: CTGGGTTCCTGCTGGGAAGCAACCTGGACTCCGGCC...CTTTAGGTCCTGGTGTGTGGGGACACACCTCCTTCCTCCTCTGGCCCGGAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR CCA 90 bp GGGCGGAGGCCTGCGTGGAACCAGTCCCAGAAGCGGCCATGGTGCAGGGCTGAGTTCGGTGTCCTTGGCTaGAGGTTTGGGGCTGTATTG +
Preference number: 4 (lower is better)
Translates to: GRRPAWNQSQKRPWCRAEFGVLG*RFGAVL
Trigger: CAATACAGCCCCAAACCTCCAGCCAAGGACACCGAA...CTCAGCCCTGCACCATGGCCGCTTCTGGGACTGGTTCCACGCAGGCCTCCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR TCA 90 bp CAGCGCGCGCATCCGTGGAAGAGGGCTAAGAGATCTGGTACAGGGTTTGGGCCGTGGATGCGATGCCCGTaGGTGGATGGGATGCCTGCA +
Preference number: 4 (lower is better)
Translates to: QRAHPWKRAKRSGTGFGPWMRCP*VDGMPA
Trigger: TGCAGGCATCCCATCCACTCACGGGCATCGCATCCA...CGGCCCAAACCCTGTACCAGATCTCTTAGCCCTCTTCCACGGATGCGCGCGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR TCA 90 bp TGTTGCTGTGTGCTCTGCCTGGACCAGCCTCCCGCTGGGTACACATGGAAAAGCAGCCGTCGGCTCCCTTaGACACAGGGAGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: CCCVLCLDQPPAGYTWKSSRRLP*TQGGTW
Trigger: CCAGGTGCCTCCCTGTGTTCAAGGGAGCCGACGGCT...GCTTTTCCATGTGTACCCAGCGGGAGGCTGGTCCAGGCAGAGCACACAGCAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR TCA 90 bp AAGCCTCTTCATCCTTGGGCCCTCTCTGCTGTGCCGCCTCCTCCTCTAGGAAGCGCACAGCTCCTGGTCTaGGCCGTCGGCTCCCTTGAA +
Preference number: 4 (lower is better)
Translates to: KPLHPWALSAVPPPPLGSAQLLV*AVGSLE
Trigger: TTCAAGGGAGCCGACGGCTCAGACCAGGAGCTGTGC...GCTTCCTAGAGGAGGAGGCGGCACAGCAGAGAGGGCCCAAGGATGAAGAGGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR TCA 90 bp TATTGCCCATTCCTAGAAGCCATCACTTCCCGGCTGCGGTGGGCAGGATGCATGGGACCAGGAGGCCCCTaGTCGCCCACTGCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: YCPFLEAITSRLRWAGCMGPGGP*SPTALP
Trigger: AGGGAGAGCAGTGGGCGATCAGGGGCCTCCTGGTCC...CATGCATCCTGCCCACCGCAGCCGGGAAGTGATGGCTTCTAGGAATGGGCAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR TCA 90 bp CCGGGCCATGGTGACACATCGGTGTGTCTCAGTCTCTCCTTTGCCCATGGATGCACGCAGAGACAGCAGTaGCGGCGTACGCCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: PGHGDTSVCLSLSFAHGCTQRQQ*RRTPCP
Trigger: AGGGCAGGGCGTACGCCGTCACTGCTGTCTCTGCGT...GCATCCATGGGCAAAGGAGAGACTGAGACACACCGATGTGTCACCATGGCCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR GCA 90 bp CCTCTTGTGTGTGGGGTGGGAGTGACGTCAGCCCTCCACAACCTAGTAAATGTTCTGCCCAGCAGGCCGTaGTGTGGTGGGCGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: PLVCGVGVTSALHNLVNVLPSRP*CGGRCP
Trigger: GGGGCAGCGCCCACCACAGCACGGCCTGCTGGGCAG...AACATTTACTAGGTTGTGGAGGGCTGACGTCACTCCCACCCCACACACAAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR GCA 90 bp CAGCGCGCGCATCCGTGGAAGAGGGCTAAGAGATCTGGTACAGGGTTTGGGCCGTGTTGCTGTGTGCTCTaGCTGGACCAGCCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: QRAHPWKRAKRSGTGFGPCCCVL*LDQPPA
Trigger: AGCGGGAGGCTGGTCCAGGCAGAGCACACAGCAACA...CGGCCCAAACCCTGTACCAGATCTCTTAGCCCTCTTCCACGGATGCGCGCGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR GCA 90 bp ACAGACACAGAATTTATTTCTGGACGCATTCTGCAGGCTGGAGGTCCCGGCAGGGCGAGGACACCGTGCTaGCCCCAGCTGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: TDTEFISGRILQAGGPGRARTPC*PQLGLG
Trigger: CCCCAGCCCCAGCTGGGGGCAGCACGGTGTCCTCGC...CCTGCCGGGACCTCCAGCCTGCAGAATGCGTCCAGAAATAAATTCTGTGTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR CCA 90 bp TATTGCCCATTCCTAGAAGCCATCACTTCCCGGCTGCGGTGGGCAGGATGCATGGGCGAGCACAGCTCCTaGTCTGAGCCGTCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: YCPFLEAITSRLRWAGCMGEHSS*SEPSAP
Trigger: GGGAGCCGACGGCTCAGACCAGGAGCTGTGCTCGCC...CATGCATCCTGCCCACCGCAGCCGGGAAGTGATGGCTTCTAGGAATGGGCAATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CCA 90 bp ACAGACAAGGCCTGGAGTGCGGAGGAAGGGATGGAATCTGACGCCTGTGGTCACCCTCGTGTTCCATTCTaGGGGGCCCGTCCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: TDKAWSAEEGMESDACGHPRVPF*GARPAG
Trigger: GCCTGCAGGACGGGCCCCCCAGAATGGAACACGAGG...GTGACCACAGGCGTCAGATTCCATCCCTTCCTCCGCACTCCAGGCCTTGTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR TCA 90 bp AAAGGCCCTGGGGCAGGACTGTACCTGGCATGTGGGAGGAGCAGTGAGGAGGCCCCCTTTTCTGTAAAGTaGAGGTTGCGGGGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: KGPGAGLYLACGRSSEEAPFSVK*RLRGQL
Trigger: GAGCTGCCCCCGCAACCTTCACTTTACAGAAAAGGG...GGCCTCCTCACTGCTCCTCCCACATGCCAGGTACAGTCCTGCCCCAGGGCCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR TCA 90 bp GCGAGACTCCATCCATCCTCCTCTCTGACTCACAGGCCAGTGGCAGAGACAGGGCCCACCTGCAACCTCTaGCCAGTTCCAGTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: ARLHPSSSLTHRPVAETGPTCNL*PVPVGA
Trigger: AGCTCCCACTGGAACTGGTCAGAGGTTGCAGGTGGG...CCCTGTCTCTGCCACTGGCCTGTGAGTCAGAGAGGAGGATGGATGGAGTCTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR GCA 90 bp GGAACCTGCCATTCATCACTCCCAACATGCCAGGCCAGAGCGGCTGAGCTGCAACCAGGGAGGCCGCTATaGCAAAGTACACGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: GTCHSSLPTCQARAAELQPGRPL*QSTRRR
Trigger: CCGCCTGCGTGTACTTTGGCATAGCGGCCTCCCTGG...TTGCAGCTCAGCCGCTCTGGCCTGGCATGTTGGGAGTGATGAATGGCAGGTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR GCA 90 bp GGGACAAGGCCTCCCCAAGGTCTTGACGCAGAGACAGCAGTGACGGCGTACGCCGCACCCTCTGATGGCTaGAAAGAAGGCCACTTGCTC +
Preference number: 4 (lower is better)
Translates to: GTRPPQGLDAETAVTAYAAPSDG*KEGHLL
Trigger: GAGCAAGTGGCCTTCTTTGCAGCCATCAGAGGGTGC...GGCGTACGCCGTCACTGCTGTCTCTGCGTCAAGACCTTGGGGAGGCCTTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR CCA 90 bp ACAGACAAGGCCTGGAGTGCGGAGGAAGGGATGGAATCTGACGCCTGTGGTCACGGCTTCTCGCGGACATaGGCGCTGATGCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: TDKAWSAEEGMESDACGHGFSRT*ALMQVV
Trigger: CACCACCTGCATCAGCGCCCATGTCCGCGAGAAGCC...GTGACCACAGGCGTCAGATTCCATCCCTTCCTCCGCACTCCAGGCCTTGTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CCA 90 bp ACAGACAAGGCCTGGAGTGCGGAGGAAGGGATGGAATCTGACGCCTGTGGTCACACTTCCCGGCTGCGGTaGGCAGGATGCATGGGAAGG +
Preference number: 4 (lower is better)
Translates to: TDKAWSAEEGMESDACGHTSRLR*AGCMGR
Trigger: CCTTCCCATGCATCCTGCCCACCGCAGCCGGGAAGT...GTGACCACAGGCGTCAGATTCCATCCCTTCCTCCGCACTCCAGGCCTTGTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CCA 90 bp ACACAGGGAGGCACCTGGGGCTGGGAGGTGCGAAGGGGCGTGCGGCCTTTAAATACCGTCGTGGGGACGTaGACTAGTCTTTCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: TQGGTWGWEVRRGVRPLNTVVGT*TSLSSC
Trigger: ACAGGAGGAAAGACTAGTCCACGTCCCCACGACGGT...ATTTAAAGGCCGCACGCCCCTTCGCACCTCCCAGCCCCAGGTGCCTCCCTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CCA 90 bp ACACAGGGAGGCACCTGGGGCTGGGAGGTGCGAAGGGGCGTGCGGCCTTTAAATGAGCCTTGTCTCTGCTaGGGATGTGTCTCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: TQGGTWGWEVRRGVRPLNEPCLC*GCVSRD
Trigger: ATCCCTGGAGACACATCCCCAGCAGAGACAAGGCTC...ATTTAAAGGCCGCACGCCCCTTCGCACCTCCCAGCCCCAGGTGCCTCCCTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR TCA 90 bp CAGCGCGCGCATCCGTGGAAGAGGGCTAAGAGATCTGGTACAGGGTTTGGGCCGGGTGCTGCCGTCCTCTaGGGACAGAACAAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: QRAHPWKRAKRSGTGFGPGAAVL*GQNKER
Trigger: TCTTTCCTTGTTCTGTCCTCAGAGGACGGCAGCACC...CGGCCCAAACCCTGTACCAGATCTCTTAGCCCTCTTCCACGGATGCGCGCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR TCA 90 bp TATTGCCCATTCCTAGAAGCCATCACTTCCCGGCTGCGGTGGGCAGGATGCATGGGAAGGGATGGAATCTaGCGCCTGTGGTCACCGCGG +
Preference number: 4 (lower is better)
Translates to: YCPFLEAITSRLRWAGCMGRDGI*RLWSPR
Trigger: CCGCGGTGACCACAGGCGTCAGATTCCATCCCTTCC...CATGCATCCTGCCCACCGCAGCCGGGAAGTGATGGCTTCTAGGAATGGGCAATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR GCA 90 bp AAGCCTCTTCATCCTTGGGCCCTCTCTGCTGTGCCGCCTCCTCCTCTAGGAAGCAGATCCTGTCTTGCGTaGTCCCAGAGTCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: KPLHPWALSAVPPPPLGSRSCLA*SQSQAS
Trigger: GGAGGCCTGACTCTGGGAGCACGCAAGACAGGATCT...GCTTCCTAGAGGAGGAGGCGGCACAGCAGAGAGGGCCCAAGGATGAAGAGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR GCA 90 bp TGTTGCTGTGTGCTCTGCCTGGACCAGCCTCCCGCTGGGTACACATGGAAAAGCAAGCTGAGGCCTGGGTaGTGCCGTCCTCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: CCCVLCLDQPPAGYTWKSKLRPG*CRPLRT
Trigger: TGTCCTCAGAGGACGGCAGCACCCAGGCCTCAGCTT...GCTTTTCCATGTGTACCCAGCGGGAGGCTGGTCCAGGCAGAGCACACAGCAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR GCA 90 bp GAAGTTCAAGGTAAACTCAGGAAGGGTCCCCCACAGCCCCTCAGGGAGCCTGCTGTGCCCTCGAGTGGATaGGATGCCCGTGAGTGGATG +
Preference number: 4 (lower is better)
Translates to: EVQGKLRKGPPQPLREPAVPSSG*DAREWM
Trigger: CATCCACTCACGGGCATCGCATCCACTCGAGGGCAC...AGCAGGCTCCCTGAGGGGCTGTGGGGGACCCTTCCTGAGTTTACCTTGAACTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR GCA 90 bp ACAGACAAGGCCTGGAGTGCGGAGGAAGGGATGGAATCTGACGCCTGTGGTCACAGAGACAGAGGCCGGTaGCCTCGAGTGGATGCGATG +
Preference number: 4 (lower is better)
Translates to: TDKAWSAEEGMESDACGHRDRGR*PRVDAM
Trigger: CATCGCATCCACTCGAGGGCACCGGCCTCTGTCTCT...GTGACCACAGGCGTCAGATTCCATCCCTTCCTCCGCACTCCAGGCCTTGTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR GCA 90 bp TGTTGCTGTGTGCTCTGCCTGGACCAGCCTCCCGCTGGGTACACATGGAAAAGCGCAGGCCTCTGCTGTTaGTGTGTGCTCTGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: CCCVLCLDQPPAGYTWKSAGLCC*CVLCLD
Trigger: GTCCAGGCAGAGCACACAGCAACAGCAGAGGCCTGC...GCTTTTCCATGTGTACCCAGCGGGAGGCTGGTCCAGGCAGAGCACACAGCAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR GCA 90 bp AGCCTCCGGGCCAGAGGAGGAAGGAGGTGTGTCCCCACACACCAGGACCTAAAGTCTCAGTCTCTCCTTTaGCCATGGATGCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SLRARGGRRCVPTHQDLKSQSLL*PWMPGP
Trigger: TGGCCCTGGCATCCATGGGCAAAGGAGAGACTGAGA...CTTTAGGTCCTGGTGTGTGGGGACACACCTCCTTCCTCCTCTGGCCCGGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR CCA 90 bp AAGCCTCTTCATCCTTGGGCCCTCTCTGCTGTGCCGCCTCCTCCTCTAGGAAGCTCAGGCCAGCGACGCTaGCAATACTGGTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: KPLHPWALSAVPPPPLGSSGQRR*QYWWCC
Trigger: ACAGCACCACCAGTATTGCCAGCGTCGCTGGCCTGA...GCTTCCTAGAGGAGGAGGCGGCACAGCAGAGAGGGCCCAAGGATGAAGAGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CCA 90 bp ACAGACAAGGCCTGGAGTGCGGAGGAAGGGATGGAATCTGACGCCTGTGGTCACTGCGATGCCCGTGAGTaGATGGGATGCCTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: TDKAWSAEEGMESDACGHCDARE*MGCLQG
Trigger: TCCCTGCAGGCATCCCATCCACTCACGGGCATCGCA...GTGACCACAGGCGTCAGATTCCATCCCTTCCTCCGCACTCCAGGCCTTGTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CCA 90 bp AAGCCTCTTCATCCTTGGGCCCTCTCTGCTGTGCCGCCTCCTCCTCTAGGAAGCGTGCGGAGGAAGGGATaGAATCTGACGCCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: KPLHPWALSAVPPPPLGSVRRKG*NLTPVV
Trigger: GACCACAGGCGTCAGATTCCATCCCTTCCTCCGCAC...GCTTCCTAGAGGAGGAGGCGGCACAGCAGAGAGGGCCCAAGGATGAAGAGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CCA 90 bp AAGCCTCTTCATCCTTGGGCCCTCTCTGCTGTGCCGCCTCCTCCTCTAGGAAGCCTGACTGCCTGGGGCTaGGAAGGGCTCCATGAAGTT +
Preference number: 4 (lower is better)
Translates to: KPLHPWALSAVPPPPLGSLTAWG*EGLHEV
Trigger: AACTTCATGGAGCCCTTCCCAGCCCCAGGCAGTCAG...GCTTCCTAGAGGAGGAGGCGGCACAGCAGAGAGGGCCCAAGGATGAAGAGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CCA 90 bp CAGACACAGAATTTATTTCTGGACGCATTCTGCAGGCTGGAGGTCCCGGCAGGCCAGGAACCCAGGCTGTaGGTCCTCATCCCGCCCCAC +
Preference number: 4 (lower is better)
Translates to: QTQNLFLDAFCRLEVPAGQEPRL*VLIPPH
Trigger: GTGGGGCGGGATGAGGACCCACAGCCTGGGTTCCTG...GCCTGCCGGGACCTCCAGCCTGCAGAATGCGTCCAGAAATAAATTCTGTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
3UTR CAA 72 bp GCCTTCGGTGTCCTTGGCTGGAGGTTTGGGGCTGTATaGCCCATTCCTAGAAGCCATCACTTCCCGGCTGCG +
Preference number: 4 (lower is better)
Translates to: AFGVLGWRFGAV*PIPRSHHFPAA
Trigger: CGCAGCCGGGAAGTGATGGCTTCTAGGAATGGGCAATACAGCCCCAAACCTCCAGCCAAGGACACCGAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR TCA 90 bp ACACAGACACAGAATTTATTTCTGGACGCATTCTGCAGGCTGGAGGTCCCGGCACCAGCCGGCCCATCTTaGCCAGGGAGGCCGCTATGC +
Preference number: 4 (lower is better)
Translates to: TQTQNLFLDAFCRLEVPAPAGPS*PGRPLC
Trigger: GCATAGCGGCCTCCCTGGTCAAGATGGGCCGGCTGG...TGCCGGGACCTCCAGCCTGCAGAATGCGTCCAGAAATAAATTCTGTGTCTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308961.5
ENST00000592634.5
CDS-3UTR TCA 90 bp CGTGAGTGGATGGGATGCCTGCAGGGAGGTGGAATCGTCTTTCTTTGTGGGGCAAGCACTCTGGGAGGCTaGGGTGTGAGGACTGCTCGA +
Preference number: 4 (lower is better)
Translates to: REWMGCLQGGGIVFLCGASTLGG*GVRTAR
Trigger: TCGAGCAGTCCTCACACCTCAGCCTCCCAGAGTGCT...TGCCCCACAAAGAAAGACGATTCCACCTCCCTGCAGGCATCCCATCCACTCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR GCA 90 bp CTGGGAGCCAGACTGAGACCCCTGACAGGACACTCTCTTCAGGGATTAAGTCACAGACGGGCTCCCCTGTaGCAAGCGTGGCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LGARLRPLTGHSLQGLSHRRAPL*QAWPSP
Trigger: TGGAGAAGGCCACGCTTGGCACAGGGGAGCCCGTCT...GTGACTTAATCCCTGAAGAGAGTGTCCTGTCAGGGGTCTCAGTCTGGCTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR GCA 90 bp GGTGGTCAGGACAGTGAGGGGAACAGCATTCCACGCAGTGCACTGCCCATGCAATCATCACTCCCAACATaGCAGGCCAGAGCGGCTGAG +
Preference number: 4 (lower is better)
Translates to: GGQDSEGNSIPRSALPMQSSLPT*QARAAE
Trigger: CTCAGCCGCTCTGGCCTGGCATGTTGGGAGTGATGA...TTGCATGGGCAGTGCACTGCGTGGAATGCTGTTCCCCTCACTGTCCTGACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR CCA 90 bp AAGCCTCTTCATCCTTGGGCCCTCTCTGCTGTGCCGCCTCCTCCTCTAGGAAGCCGCTGGCAATACTGGTaGTGCTGTAGGCTTTGCGGT +
Preference number: 4 (lower is better)
Translates to: KPLHPWALSAVPPPPLGSRWQYW*CCRLCG
Trigger: ACCGCAAAGCCTACAGCACCACCAGTATTGCCAGCG...GCTTCCTAGAGGAGGAGGCGGCACAGCAGAGAGGGCCCAAGGATGAAGAGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CCA 90 bp GGGAGCCAGACTGAGACCCCTGACAGGACACTCTCTTCAGGGATTAAGTCACTCGGCTTCTCGCGGACATaGGCGCTGATGCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GSQTETPDRTLSSGIKSLGFSRT*ALMQVV
Trigger: CACCACCTGCATCAGCGCCCATGTCCGCGAGAAGCC...GAGTGACTTAATCCCTGAAGAGAGTGTCCTGTCAGGGGTCTCAGTCTGGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR CCA 90 bp CCTCTTGTGTGTGGGGTGGGAGTGACGTCAGCCCTCCACAACCTAGTAAATGTTGCTGTGTGCTCTGCCTaGACCAGCCTCCCGCTGGGT +
Preference number: 4 (lower is better)
Translates to: PLVCGVGVTSALHNLVNVAVCSA*TSLPLG
Trigger: ACCCAGCGGGAGGCTGGTCCAGGCAGAGCACACAGC...AACATTTACTAGGTTGTGGAGGGCTGACGTCACTCCCACCCCACACACAAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CCA 90 bp ACACAGGGAGGCACCTGGGGCTGGGAGGTGCGAAGGGGCGTGCGGCCTTTAAATATGTGTCTCCAGGGATaGATTCTCGGGAAGCAAGTG +
Preference number: 4 (lower is better)
Translates to: TQGGTWGWEVRRGVRPLNMCLQG*ILGKQV
Trigger: CACTTGCTTCCCGAGAATCCATCCCTGGAGACACAT...ATTTAAAGGCCGCACGCCCCTTCGCACCTCCCAGCCCCAGGTGCCTCCCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CCA 90 bp TGGCTTGGGGACAGGGAGCAGTTCCAGCCTGAGCTGGGCTACAGTCAAGACCTCCCCTCTCTGCCTGCCTaGAACCTGCCATTCATCACT +
Preference number: 4 (lower is better)
Translates to: WLGDREQFQPELGYSQDLPSLPA*NLPFIT
Trigger: AGTGATGAATGGCAGGTTCCAGGCAGGCAGAGAGGG...GAGGTCTTGACTGTAGCCCAGCTCAGGCTGGAACTGCTCCCTGTCCCCAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR TCA 90 bp GAAGTTCAAGGTAAACTCAGGAAGGGTCCCCCACAGCCCCTCAGGGAGCCTGCTCAGGCTGGAGTACAGTaGCATGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: EVQGKLRKGPPQPLREPAQAGVQ*HDLGSL
Trigger: CAGTGAGCCGAGATCATGTCACTGTACTCCAGCCTG...AGCAGGCTCCCTGAGGGGCTGTGGGGGACCCTTCCTGAGTTTACCTTGAACTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR GCA 90 bp ACAGACAAGGCCTGGAGTGCGGAGGAAGGGATGGAATCTGACGCCTGTGGTCACTGGCAATACTGGTGGTaGTGTAGGCTTTGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: TDKAWSAEEGMESDACGHWQYWW*CRLCGG
Trigger: GCCACCGCAAAGCCTACAGCACCACCAGTATTGCCA...GTGACCACAGGCGTCAGATTCCATCCCTTCCTCCGCACTCCAGGCCTTGTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR GCA 90 bp ACAGACACAGAATTTATTTCTGGACGCATTCTGCAGGCTGGAGGTCCCGGCAGGCCAGGGAGGCCGCTATaGCAAAGTACACGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: TDTEFISGRILQAGGPGRPGRPL*QSTRRR
Trigger: CCGCCTGCGTGTACTTTGGCATAGCGGCCTCCCTGG...CCTGCCGGGACCTCCAGCCTGCAGAATGCGTCCAGAAATAAATTCTGTGTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308961.5
ENST00000592634.5
CDS-3UTR GCA 90 bp TATTGCCCATTCCTAGAAGCCATCACTTCCCGGCTGCGGTGGGCAGGATGCATGTCTGCTGTTGCTGTGTaGTCTGCCTGGACCAGCCTC +
Preference number: 4 (lower is better)
Translates to: YCPFLEAITSRLRWAGCMSAVAV*SAWTSL
Trigger: GAGGCTGGTCCAGGCAGAGCACACAGCAACAGCAGA...CATGCATCCTGCCCACCGCAGCCGGGAAGTGATGGCTTCTAGGAATGGGCAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR GCA 90 bp CTGGGAGCCAGACTGAGACCCCTGACAGGACACTCTCTTCAGGGATTAAGTCACGTGATGTCTGGCTCATaGTCCAGACGGGCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: LGARLRPLTGHSLQGLSHVMSGS*SRRAPL
Trigger: CAGGGGAGCCCGTCTGGAGCATGAGCCAGACATCAC...GTGACTTAATCCCTGAAGAGAGTGTCCTGTCAGGGGTCTCAGTCTGGCTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR GCA 90 bp AGACACAGAATTTATTTCTGGACGCATTCTGCAGGCTGGAGGTCCCGGCAGGCACGCACCCTCCCTCTCTaGCTGCCTGGAACCTGCCAT +
Preference number: 4 (lower is better)
Translates to: RHRIYFWTHSAGWRSRQARTLPL*LPGTCH
Trigger: ATGGCAGGTTCCAGGCAGGCAGAGAGGGAGGGTGCG...TGCCTGCCGGGACCTCCAGCCTGCAGAATGCGTCCAGAAATAAATTCTGTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR CCA 90 bp GGTGGTCAGGACAGTGAGGGGAACAGCATTCCACGCAGTGCACTGCCCATGCAACGCTGGCAATACTGGTaGTGCTGTAGGCTTTGCGGT +
Preference number: 4 (lower is better)
Translates to: GGQDSEGNSIPRSALPMQRWQYW*CCRLCG
Trigger: ACCGCAAAGCCTACAGCACCACCAGTATTGCCAGCG...TTGCATGGGCAGTGCACTGCGTGGAATGCTGTTCCCCTCACTGTCCTGACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR CCA 90 bp CACAGACACAGAATTTATTTCTGGACGCATTCTGCAGGCTGGAGGTCCCGGCAGGGCTTCTCGCGGACATaGGCGCTGATGCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: HRHRIYFWTHSAGWRSRQGFSRT*ALMQVV
Trigger: CACCACCTGCATCAGCGCCCATGTCCGCGAGAAGCC...CTGCCGGGACCTCCAGCCTGCAGAATGCGTCCAGAAATAAATTCTGTGTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308961.5
ENST00000592634.5
CDS-3UTR CCA 90 bp TATTGCCCATTCCTAGAAGCCATCACTTCCCGGCTGCGGTGGGCAGGATGCATGCTTCGAGGCAGGCGCTaGAAGAAGGGACCCAGAATC +
Preference number: 4 (lower is better)
Translates to: YCPFLEAITSRLRWAGCMLRGRR*KKGPRI
Trigger: GATTCTGGGTCCCTTCTTCCAGCGCCTGCCTCGAAG...CATGCATCCTGCCCACCGCAGCCGGGAAGTGATGGCTTCTAGGAATGGGCAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CCA 90 bp GAAGTTCAAGGTAAACTCAGGAAGGGTCCCCCACAGCCCCTCAGGGAGCCTGCTGTGCTGGAACACGCGTaGACATCTGTGCTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: EVQGKLRKGPPQPLREPAVLEHA*TSVLSP
Trigger: TGGAGAGAGCACAGATGTCCACGCGTGTTCCAGCAC...AGCAGGCTCCCTGAGGGGCTGTGGGGGACCCTTCCTGAGTTTACCTTGAACTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CCA 90 bp CACACAGACACAGAATTTATTTCTGGACGCATTCTGCAGGCTGGAGGTCCCGGCCCCATGCAAAGGCCCTaGGGCAGGACTGTACCTGGC +
Preference number: 4 (lower is better)
Translates to: HTDTEFISGRILQAGGPGPMQRP*GRTVPG
Trigger: GCCAGGTACAGTCCTGCCCCAGGGCCTTTGCATGGG...GCCGGGACCTCCAGCCTGCAGAATGCGTCCAGAAATAAATTCTGTGTCTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR CCA 90 bp GGGAGCCAGACTGAGACCCCTGACAGGACACTCTCTTCAGGGATTAAGTCACTCGTGCAGGGAGAGAGATaGCAGGGCGAGACTCCATCC +
Preference number: 4 (lower is better)
Translates to: GSQTETPDRTLSSGIKSLVQGER*QGETPS
Trigger: GGATGGAGTCTCGCCCTGCCATCTCTCTCCCTGCAC...GAGTGACTTAATCCCTGAAGAGAGTGTCCTGTCAGGGGTCTCAGTCTGGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR CCA 90 bp ATTAAGTCACTCAGGAAGAGGGCCCTAGACTCTGGAGATGTGGAAACTGATGCAAGACGCTCCACGCCCTaGCCGGTGCCCACCCTGGGA +
Preference number: 4 (lower is better)
Translates to: IKSLRKRALDSGDVETDARRSTP*PVPTLG
Trigger: TCCCAGGGTGGGCACCGGCCAGGGCGTGGAGCGTCT...TGCATCAGTTTCCACATCTCCAGAGTCTAGGGCCCTCTTCCTGAGTGACTTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR TCA 90 bp TGTTGCTGTGTGCTCTGCCTGGACCAGCCTCCCGCTGGGTACACATGGAAAAGCTTTGTGGGGCATCTCTaGGGGGCCCTTATTCCCATT +
Preference number: 4 (lower is better)
Translates to: CCCVLCLDQPPAGYTWKSFVGHL*GALIPI
Trigger: AATGGGAATAAGGGCCCCTCAGAGATGCCCCACAAA...GCTTTTCCATGTGTACCCAGCGGGAGGCTGGTCCAGGCAGAGCACACAGCAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR GCA 90 bp CGTGAGTGGATGGGATGCCTGCAGGGAGGTGGAATCGTCTTTCTTTGTGGGGCATTGGAGCCTTGTCTCTaGTGGGGATGTGTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: REWMGCLQGGGIVFLCGALEPCL*WGCVSR
Trigger: CCTGGAGACACATCCCCAGCAGAGACAAGGCTCCAA...TGCCCCACAAAGAAAGACGATTCCACCTCCCTGCAGGCATCCCATCCACTCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR GCA 90 bp ACACACAGACACAGAATTTATTTCTGGACGCATTCTGCAGGCTGGAGGTCCCGGGCAGTGCACTGCCCATaGAAAGGCCCTGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: THRHRIYFWTHSAGWRSRAVHCP*KGPGAG
Trigger: TCCTGCCCCAGGGCCTTTGCATGGGCAGTGCACTGC...CCGGGACCTCCAGCCTGCAGAATGCGTCCAGAAATAAATTCTGTGTCTGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR GCA 90 bp CCGGGCCATGGTGACACATCGGTGTGTCTCAGTCTCTCCTTTGCCCATGGATGCTGCCTGCCTGGAACCTaGCATTCATCACTCCCAACA +
Preference number: 4 (lower is better)
Translates to: PGHGDTSVCLSLSFAHGCCLPGT*HSSLPT
Trigger: TGTTGGGAGTGATGAATGGCAGGTTCCAGGCAGGCA...GCATCCATGGGCAAAGGAGAGACTGAGACACACCGATGTGTCACCATGGCCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR GCA 90 bp TGGTGTTCAAGAAGGCTGCTTTACTTCTTGTCCGGGATGGAACAGAGAGGGTGGACACTGACTTCCCCCTaGGAGGACACCGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: WCSRRLLYFLSGMEQRGWTLTSP*EDTVLP
Trigger: GGGCAGCACGGTGTCCTCGCAGGGGGAAGTCAGTGT...CCACCCTCTCTGTTCCATCCCGGACAAGAAGTAAAGCAGCCTTCTTGAACACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR CCA 90 bp ACACAGACACAGAATTTATTTCTGGACGCATTCTGCAGGCTGGAGGTCCCGGCAACGCATTCTGCAGGCTaGAGGTCCCGGCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: TQTQNLFLDAFCRLEVPATHSAG*RSRQAQ
Trigger: CTGTGCCTGCCGGGACCTCCAGCCTGCAGAATGCGT...TGCCGGGACCTCCAGCCTGCAGAATGCGTCCAGAAATAAATTCTGTGTCTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308961.5
ENST00000592634.5
CDS-3UTR CCA 90 bp AAGCCTCTTCATCCTTGGGCCCTCTCTGCTGTGCCGCCTCCTCCTCTAGGAAGCATGCCTGCAGGGAGGTaGAATCGTCTTTCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: KPLHPWALSAVPPPPLGSMPAGR*NRLSLW
Trigger: CCACAAAGAAAGACGATTCCACCTCCCTGCAGGCAT...GCTTCCTAGAGGAGGAGGCGGCACAGCAGAGAGGGCCCAAGGATGAAGAGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CCA 90 bp CCTCTTGTGTGTGGGGTGGGAGTGACGTCAGCCCTCCACAACCTAGTAAATGTTGGCTTTGGGGTTCCCTaGAGCCCAGCAAGAGACCAC +
Preference number: 4 (lower is better)
Translates to: PLVCGVGVTSALHNLVNVGFGVP*SPARDH
Trigger: GTGGTCTCTTGCTGGGCTCCAGGGAACCCCAAAGCC...AACATTTACTAGGTTGTGGAGGGCTGACGTCACTCCCACCCCACACACAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CCA 90 bp ACACAGAATTTATTTCTGGACGCATTCTGCAGGCTGGAGGTCCCGGCAGGCACAGGCAGGAGTGATGTCTaGCTCATGCTCCAGACGGGC +
Preference number: 4 (lower is better)
Translates to: TQNLFLDAFCRLEVPAGTGRSDV*LMLQTG
Trigger: GCCCGTCTGGAGCATGAGCCAGACATCACTCCTGCC...TGTGCCTGCCGGGACCTCCAGCCTGCAGAATGCGTCCAGAAATAAATTCTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR CCA 90 bp ACCCCTGACAGGACACTCTCTTCAGGGATTAAGTCACTCAGGAAGAGGGCCCTAACAGGGAGGCTGGCTTaGGGACAGGGAGCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: TPDRTLSSGIKSLRKRALTGRLA*GQGAVP
Trigger: TGGAACTGCTCCCTGTCCCCAAGCCAGCCTCCCTGT...TAGGGCCCTCTTCCTGAGTGACTTAATCCCTGAAGAGAGTGTCCTGTCAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR TCA 90 bp GACACAGAATTTATTTCTGGACGCATTCTGCAGGCTGGAGGTCCCGGCAGGCACGGGATATCCCAGTACTaGCGAAAAACCTTCGGCGCC +
Preference number: 4 (lower is better)
Translates to: DTEFISGRILQAGGPGRHGISQY*RKTFGA
Trigger: GGCGCCGAAGGTTTTTCGTCAGTACTGGGATATCCC...GTGCCTGCCGGGACCTCCAGCCTGCAGAATGCGTCCAGAAATAAATTCTGTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308961.5
ENST00000592634.5
CDS-3UTR TCA 90 bp GCGAGACTCCATCCATCCTCCTCTCTGACTCACAGGCCAGTGGCAGAGACAGGGAGCTGTCGCTATGACTaGAATGGCTGGTGTTCAAGA +
Preference number: 4 (lower is better)
Translates to: ARLHPSSSLTHRPVAETGSCRYD*NGWCSR
Trigger: TCTTGAACACCAGCCATTTCAGTCATAGCGACAGCT...CCCTGTCTCTGCCACTGGCCTGTGAGTCAGAGAGGAGGATGGATGGAGTCTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR TCA 90 bp ACACAGACACAGAATTTATTTCTGGACGCATTCTGCAGGCTGGAGGTCCCGGCAGCCTCCCCAAGGTCTTaGCGCAGAGACAGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: TQTQNLFLDAFCRLEVPAASPRS*RRDSSD
Trigger: GTCACTGCTGTCTCTGCGTCAAGACCTTGGGGAGGC...TGCCGGGACCTCCAGCCTGCAGAATGCGTCCAGAAATAAATTCTGTGTCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR GCA 90 bp ACACAGAATTTATTTCTGGACGCATTCTGCAGGCTGGAGGTCCCGGCAGGCACATGCGGTGGCAATCGGTaGCATCGGGGATATCCCAGT +
Preference number: 4 (lower is better)
Translates to: TQNLFLDAFCRLEVPAGTCGGNR*HRGYPS
Trigger: ACTGGGATATCCCCGATGGCACCGATTGCCACCGCA...TGTGCCTGCCGGGACCTCCAGCCTGCAGAATGCGTCCAGAAATAAATTCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308961.5
ENST00000592634.5
CDS-3UTR GCA 90 bp CAGACACAGAATTTATTTCTGGACGCATTCTGCAGGCTGGAGGTCCCGGCAGGCTGGCAATACTGGTGGTaGTGTAGGCTTTGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: QTQNLFLDAFCRLEVPAGWQYWW*CRLCGG
Trigger: GCCACCGCAAAGCCTACAGCACCACCAGTATTGCCA...GCCTGCCGGGACCTCCAGCCTGCAGAATGCGTCCAGAAATAAATTCTGTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308961.5
ENST00000592634.5
CDS-3UTR GCA 90 bp ACACACAGACACAGAATTTATTTCTGGACGCATTCTGCAGGCTGGAGGTCCCGGGTAGTTGTGCGTGCGTaGTCCCAGAGTCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: THRHRIYFWTHSAGWRSRVVVRA*SQSQAS
Trigger: GGAGGCCTGACTCTGGGAGCACGCACGCACAACTAC...CCGGGACCTCCAGCCTGCAGAATGCGTCCAGAAATAAATTCTGTGTCTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308961.5
CDS-3UTR CCA 90 bp CAGACACAGAATTTATTTCTGGACGCATTCTGCAGGCTGGAGGTCCCGGCAGGCCGACGCTGGCAATACTaGTGGTGCTGTAGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: QTQNLFLDAFCRLEVPAGRRWQY*WCCRLC
Trigger: GCAAAGCCTACAGCACCACCAGTATTGCCAGCGTCG...GCCTGCCGGGACCTCCAGCCTGCAGAATGCGTCCAGAAATAAATTCTGTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308961.5
ENST00000592634.5
CDS-3UTR CCA 90 bp CACAGACACAGAATTTATTTCTGGACGCATTCTGCAGGCTGGAGGTCCCGGCAGTCTGACCAGTTCCAGTaGGAGCTGGGGAGGGACAAG +
Preference number: 4 (lower is better)
Translates to: HRHRIYFWTHSAGWRSRQSDQFQ*ELGRDK
Trigger: CTTGTCCCTCCCCAGCTCCCACTGGAACTGGTCAGA...CTGCCGGGACCTCCAGCCTGCAGAATGCGTCCAGAAATAAATTCTGTGTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR GCA 90 bp AGACACAGAATTTATTTCTGGACGCATTCTGCAGGCTGGAGGTCCCGGCAGGCATGGCAATACTGGTGGTaGTGTAGGCTTTGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: RHRIYFWTHSAGWRSRQAWQYWW*CRLCGG
Trigger: GCCACCGCAAAGCCTACAGCACCACCAGTATTGCCA...TGCCTGCCGGGACCTCCAGCCTGCAGAATGCGTCCAGAAATAAATTCTGTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308961.5
ENST00000592634.5
CDS-3UTR GCA 90 bp ACACACAGACACAGAATTTATTTCTGGACGCATTCTGCAGGCTGGAGGTCCCGGTTTCTGGACGCATTCTaGAGGCTGGAGGTCCCGGCA +
Preference number: 4 (lower is better)
Translates to: THRHRIYFWTHSAGWRSRFLDAF*RLEVPA
Trigger: TGCCGGGACCTCCAGCCTGCAGAATGCGTCCAGAAA...CCGGGACCTCCAGCCTGCAGAATGCGTCCAGAAATAAATTCTGTGTCTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308961.5
ENST00000592634.5
CDS-3UTR GCA 90 bp GGTGTTCAAGAAGGCTGCTTTACTTCTTGTCCGGGATGGAACAGAGAGGGTGGACAGCATTCCACGCAGTaGACTGCCCATGCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: GVQEGCFTSCPGWNREGGQHSTQ*TAHAKA
Trigger: GGCCTTTGCATGGGCAGTGCACTGCGTGGAATGCTG...TCCACCCTCTCTGTTCCATCCCGGACAAGAAGTAAAGCAGCCTTCTTGAACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR CCA 90 bp ACACAGAATTTATTTCTGGACGCATTCTGCAGGCTGGAGGTCCCGGCAGGCACACGCTGGCAATACTGGTaGTGCTGTAGGCTTTGCGGT +
Preference number: 4 (lower is better)
Translates to: TQNLFLDAFCRLEVPAGTRWQYW*CCRLCG
Trigger: ACCGCAAAGCCTACAGCACCACCAGTATTGCCAGCG...TGTGCCTGCCGGGACCTCCAGCCTGCAGAATGCGTCCAGAAATAAATTCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308961.5
ENST00000592634.5
CDS-3UTR CCA 90 bp ACACAGACACAGAATTTATTTCTGGACGCATTCTGCAGGCTGGAGGTCCCGGCATCAGGCCAGCGACGCTaGCAATACTGGTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: TQTQNLFLDAFCRLEVPASGQRR*QYWWCC
Trigger: ACAGCACCACCAGTATTGCCAGCGTCGCTGGCCTGA...TGCCGGGACCTCCAGCCTGCAGAATGCGTCCAGAAATAAATTCTGTGTCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308961.5
ENST00000592634.5
CDS-3UTR CCA 90 bp ACACACAGACACAGAATTTATTTCTGGACGCATTCTGCAGGCTGGAGGTCCCGGTCAGGCCAGCGACGCTaGCAATACTGGTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: THRHRIYFWTHSAGWRSRSGQRR*QYWWCC
Trigger: ACAGCACCACCAGTATTGCCAGCGTCGCTGGCCTGA...CCGGGACCTCCAGCCTGCAGAATGCGTCCAGAAATAAATTCTGTGTCTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308961.5
ENST00000592634.5
CDS-3UTR TCA 90 bp ACAGACACAGAATTTATTTCTGGACGCATTCTGCAGGCTGGAGGTCCCGGCAGGCGACAGCAGCTGCAGTaGACGTGTATTGTCCAACCT +
Preference number: 4 (lower is better)
Translates to: TDTEFISGRILQAGGPGRRQQLQ*TCIVQP
Trigger: AGGTTGGACAATACACGTTCACTGCAGCTGCTGTCG...CCTGCCGGGACCTCCAGCCTGCAGAATGCGTCCAGAAATAAATTCTGTGTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308961.5
ENST00000592634.5
CDS-3UTR GCA 90 bp ACACAGACACAGAATTTATTTCTGGACGCATTCTGCAGGCTGGAGGTCCCGGCATGGTGCTGTAGGCTTTaGGGTGGCAATCGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: TQTQNLFLDAFCRLEVPAWCCRL*GGNRCH
Trigger: ATGGCACCGATTGCCACCGCAAAGCCTACAGCACCA...TGCCGGGACCTCCAGCCTGCAGAATGCGTCCAGAAATAAATTCTGTGTCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308961.5
ENST00000592634.5
CDS-3UTR GCA 90 bp ATTAAGTCACTCAGGAAGAGGGCCCTAGACTCTGGAGATGTGGAAACTGATGCATCCTTTGCCCATGGATaGCAGGGCCAGGCCACGCAT +
Preference number: 4 (lower is better)
Translates to: IKSLRKRALDSGDVETDASFAHG*QGQATH
Trigger: ATGCGTGGCCTGGCCCTGGCATCCATGGGCAAAGGA...TGCATCAGTTTCCACATCTCCAGAGTCTAGGGCCCTCTTCCTGAGTGACTTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR CCA 90 bp AGACACAGAATTTATTTCTGGACGCATTCTGCAGGCTGGAGGTCCCGGCAGGCAACAGGGCTCACACCTTaGGTTTTGCAAACACCTCCC +
Preference number: 4 (lower is better)
Translates to: RHRIYFWTHSAGWRSRQATGLTP*VLQTPP
Trigger: GGGAGGTGTTTGCAAAACCCAAGGTGTGAGCCCTGT...TGCCTGCCGGGACCTCCAGCCTGCAGAATGCGTCCAGAAATAAATTCTGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308961.5
ENST00000592634.5
CDS-3UTR CCA 90 bp ACACAGAATTTATTTCTGGACGCATTCTGCAGGCTGGAGGTCCCGGCAGGCACAACTTCTTGTCCGGGATaGAACAGAGAGGGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: TQNLFLDAFCRLEVPAGTTSCPG*NREGGG
Trigger: TCCTCCACCCTCTCTGTTCCATCCCGGACAAGAAGT...TGTGCCTGCCGGGACCTCCAGCCTGCAGAATGCGTCCAGAAATAAATTCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR CCA 90 bp ACAGACACAGAATTTATTTCTGGACGCATTCTGCAGGCTGGAGGTCCCGGCAGGAGTTCCAGCCTGAGCTaGGCTACAGTCAAGACCTCA +
Preference number: 4 (lower is better)
Translates to: TDTEFISGRILQAGGPGRSSSLS*ATVKTS
Trigger: TGAGGTCTTGACTGTAGCCCAGCTCAGGCTGGAACT...CCTGCCGGGACCTCCAGCCTGCAGAATGCGTCCAGAAATAAATTCTGTGTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR GCA 90 bp GACAGGACACTCTCTTCAGGGATTAAGTCACTCAGGAAGAGGGCCCTAGACTCTGGTGTTCAAGAAGGCTaGTTTACTTCTTGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: DRTLSSGIKSLRKRALDSGVQEG*FTSCPG
Trigger: TCCCGGACAAGAAGTAAAGCAGCCTTCTTGAACACC...AGAGTCTAGGGCCCTCTTCCTGAGTGACTTAATCCCTGAAGAGAGTGTCCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS CCA 90 bp CACCACGGACCCCGCCAGCTCGGGAAGCGCAAGGGCAGCCGCGGCTaGCTATCGCGAGACTTCTCGGGCTGCGCGCGCAACCTTTCGGGC +
Preference number: 5 (lower is better)
Translates to: HHGPRQLGKRKGSRG*LSRDFSGCARNLSG
Trigger: GCCCGAAAGGTTGCGCGCGCAGCCCGAGAAGTCTCGCGATAGCCAGCCGCGGCTGCCCTTGCGCTTCCCGAGCTGGCGGGGTCCGTGGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591160.1
CDS-3UTR CAA 90 bp GGAGGTGATGTCAGGCCCGGGTGGGGCTCGGCCGGACCAAGACGCTCCACGCCCAGGCCGGAGTCCAGGTaGCTTCCCAGCAGGAACCCA +
Preference number: 5 (lower is better)
Translates to: GGDVRPGWGSAGPRRSTPRPESR*LPSRNP
Trigger: TGGGTTCCTGCTGGGAAGCAACCTGGACTCCGGCCT...GGGCGTGGAGCGTCTTGGTCCGGCCGAGCCCCACCCGGGCCTGACATCACCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS CCA 90 bp GCGCGGACATGGACATGGATCGCGCGCACGCGCCGGGGACCGGCCTaGAGGAAGAGAGTAGCACGTGCATCCCCAGGCCGATTCCTAGAG +
Preference number: 5 (lower is better)
Translates to: ARTWTWIARTRRGPA*RKRVARASPGRFLE
Trigger: CTCTAGGAATCGGCCTGGGGATGCACGTGCTACTCTCTTCCTCCAGGCCGGTCCCCGGCGCGTGCGCGCGATCCATGTCCATGTCCGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591160.1
CDS-3UTR CAA 90 bp CAGCGCGCGCATCCGTGGAAGAGGGCTAAGAGATCTGGTACAGGGTTTGGGCCGGCCAGGCCGGTGTTCTaGGAGCCTTGTCTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: QRAHPWKRAKRSGTGFGPARPVF*EPCLCW
Trigger: CCAGCAGAGACAAGGCTCCAAGAACACCGGCCTGGC...CGGCCCAAACCCTGTACCAGATCTCTTAGCCCTCTTCCACGGATGCGCGCGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CAA 90 bp TGTTGCTGTGTGCTCTGCCTGGACCAGCCTCCCGCTGGGTACACATGGAAAAGCGAGCCGTCGGCTCCCTaGAACACAGGGAGGCACCTG +
Preference number: 5 (lower is better)
Translates to: CCCVLCLDQPPAGYTWKSEPSAP*NTGRHL
Trigger: CAGGTGCCTCCCTGTGTTCAAGGGAGCCGACGGCTC...GCTTTTCCATGTGTACCCAGCGGGAGGCTGGTCCAGGCAGAGCACACAGCAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS GCA 90 bp GTCAGGACAGTGAGGGGAACAGCATTCCACGCAGTGCACTGCCCATaGAAAGGCCCTGGGGCAGGACTGTACTGCGTGCTCCCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: VRTVRGTAFHAVHCP*KGPGAGLYCVLPES
Trigger: TGACTCTGGGAGCACGCAGTACAGTCCTGCCCCAGGGCCTTTGCATGGGCAGTGCACTGCGTGGAATGCTGTTCCCCTCACTGTCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650663.1
CDS-3UTR CAA 90 bp TATTGCCCATTCCTAGAAGCCATCACTTCCCGGCTGCGGTGGGCAGGATGCATGGATCTGGTACAGGGTTaGGGCCGCACACGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: YCPFLEAITSRLRWAGCMDLVQG*GRTRAW
Trigger: CCAGGCCCGTGTGCGGCCCAAACCCTGTACCAGATC...CATGCATCCTGCCCACCGCAGCCGGGAAGTGATGGCTTCTAGGAATGGGCAATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS GCA 90 bp CGGTCAGGCCAGCGACGCTGGCAATACTGGTGGTGCTGTAGGCTTTaGGGTGGCAATCGGTGCCATCGGGGATATCCCAGTACTGACGAA +
Preference number: 5 (lower is better)
Translates to: RSGQRRWQYWWCCRL*GGNRCHRGYPSTDE
Trigger: TTCGTCAGTACTGGGATATCCCCGATGGCACCGATTGCCACCGCAAAGCCTACAGCACCACCAGTATTGCCAGCGTCGCTGGCCTGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308961.5
ENST00000418389.6
ENST00000592634.5
CDS GCA 90 bp CTGATGAGTCCCAACCTGTGGCAGCGACGCTGGCAATACTGGTGGTaGTGTAGGCTTTGCGGTGGCAATCGGTGCCATCGGGGATATCCC +
Preference number: 5 (lower is better)
Translates to: LMSPNLWQRRWQYWW*CRLCGGNRCHRGYP
Trigger: GGGATATCCCCGATGGCACCGATTGCCACCGCAAAGCCTACAGCACCACCAGTATTGCCAGCGTCGCTGCCACAGGTTGGGACTCATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591160.1
CDS-3UTR CAA 90 bp CAGACACAGAATTTATTTCTGGACGCATTCTGCAGGCTGGAGGTCCCGGCAGGCTCCAGCCGGCCCATCTaGACCAGGGAGGCCGCTATG +
Preference number: 5 (lower is better)
Translates to: QTQNLFLDAFCRLEVPAGSSRPI*TREAAM
Trigger: CATAGCGGCCTCCCTGGTCAAGATGGGCCGGCTGGA...GCCTGCCGGGACCTCCAGCCTGCAGAATGCGTCCAGAAATAAATTCTGTGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308961.5
ENST00000592634.5
CDS-3UTR CAA 90 bp GGCGAGCACAGCTCCTGGTCTGAGCCGTCGGCTCCCTTGAACACAGGGAGGCACAGGTTTGGGGCTGTATaGCCCATTCCTAGAAGCCAT +
Preference number: 5 (lower is better)
Translates to: GEHSSWSEPSAPLNTGRHRFGAV*PIPRSH
Trigger: ATGGCTTCTAGGAATGGGCAATACAGCCCCAAACCT...GTGCCTCCCTGTGTTCAAGGGAGCCGACGGCTCAGACCAGGAGCTGTGCTCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CAA 90 bp CGTGAGTGGATGGGATGCCTGCAGGGAGGTGGAATCGTCTTTCTTTGTGGGGCACAGCCTTCGGTGTCCTaGGCTGGAGGTTTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: REWMGCLQGGGIVFLCGAQPSVS*AGGLGL
Trigger: CAGCCCCAAACCTCCAGCCAAGGACACCGAAGGCTG...TGCCCCACAAAGAAAGACGATTCCACCTCCCTGCAGGCATCCCATCCACTCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS GCA 90 bp TCTCCAACCTTCAGTCCCTACCAGCGACGCTGGCAATACTGGTGGTaGTGTAGGCTTTGCGGTGGCAATCGGTGCCATCGGGGATATCCC +
Preference number: 5 (lower is better)
Translates to: SPTFSPYQRRWQYWW*CRLCGGNRCHRGYP
Trigger: GGGATATCCCCGATGGCACCGATTGCCACCGCAAAGCCTACAGCACCACCAGTATTGCCAGCGTCGCTGGTAGGGACTGAAGGTTGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593233.1
ENST00000650663.1
CDS-3UTR CAA 90 bp GAAGTTCAAGGTAAACTCAGGAAGGGTCCCCCACAGCCCCTCAGGGAGCCTGCTAAAGCCTCTTCATCCTaGGGCCCTCTCTGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: EVQGKLRKGPPQPLREPAKASSS*GPLCCA
Trigger: GGCACAGCAGAGAGGGCCCAAGGATGAAGAGGCTTT...AGCAGGCTCCCTGAGGGGCTGTGGGGGACCCTTCCTGAGTTTACCTTGAACTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS GCA 90 bp CGCTGGCAATACTGGTGGTGCTGTAGGCTTTGCGGTGGCAATCGGTaGCATCGGGGATATCCCAGTACTGACGAAAAACCTTCGGCGCCA +
Preference number: 5 (lower is better)
Translates to: RWQYWWCCRLCGGNR*HRGYPSTDEKPSAP
Trigger: TGGCGCCGAAGGTTTTTCGTCAGTACTGGGATATCCCCGATGGCACCGATTGCCACCGCAAAGCCTACAGCACCACCAGTATTGCCAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000308961.5
ENST00000418389.6
ENST00000591160.1
ENST00000592634.5
ENST00000593233.1
ENST00000650663.1
CDS GCA 90 bp AGTCCCTACCAGCGACGCTGGCAATACTGGTGGTGCTGTAGGCTTTaGGGTGGCAATCGGTGCCATCGGGGATATCCCAGTACTGACGAA +
Preference number: 5 (lower is better)
Translates to: SPYQRRWQYWWCCRL*GGNRCHRGYPSTDE
Trigger: TTCGTCAGTACTGGGATATCCCCGATGGCACCGATTGCCACCGCAAAGCCTACAGCACCACCAGTATTGCCAGCGTCGCTGGTAGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593233.1
ENST00000650663.1
CDS GCA 90 bp AACCTGTGGCAGCGACGCTGGCAATACTGGTGGTGCTGTAGGCTTTaGGGTGGCAATCGGTGCCATCGGGGATATCCCAGTACTGACGAA +
Preference number: 5 (lower is better)
Translates to: NLWQRRWQYWWCCRL*GGNRCHRGYPSTDE
Trigger: TTCGTCAGTACTGGGATATCCCCGATGGCACCGATTGCCACCGCAAAGCCTACAGCACCACCAGTATTGCCAGCGTCGCTGCCACAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591160.1
CDS CCA 90 bp GCTTCTCCAACCTTCAGTCCCTACCAGCGACGCTGGCAATACTGGTaGTGCTGTAGGCTTTGCGGTGGCAATCGGTGCCATCGGGGATAT +
Preference number: 5 (lower is better)
Translates to: ASPTFSPYQRRWQYW*CCRLCGGNRCHRGY
Trigger: ATATCCCCGATGGCACCGATTGCCACCGCAAAGCCTACAGCACCACCAGTATTGCCAGCGTCGCTGGTAGGGACTGAAGGTTGGAGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593233.1
ENST00000650663.1
CDS CCA 90 bp TATGCTTCTCCAACCTTCAGTCCCTACCAGCGACGCTGGCAATACTaGTGGTGCTGTAGGCTTTGCGGTGGCAATCGGTGCCATCGGGGA +
Preference number: 5 (lower is better)
Translates to: YASPTFSPYQRRWQY*WCCRLCGGNRCHRG
Trigger: TCCCCGATGGCACCGATTGCCACCGCAAAGCCTACAGCACCACCAGTATTGCCAGCGTCGCTGGTAGGGACTGAAGGTTGGAGAAGCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593233.1
ENST00000650663.1
CDS-3UTR CAA 90 bp ACACAGACACAGAATTTATTTCTGGACGCATTCTGCAGGCTGGAGGTCCCGGCATCCAGCCGGCCCATCTaGACCAGGGAGGCCGCTATG +
Preference number: 5 (lower is better)
Translates to: TQTQNLFLDAFCRLEVPASSRPI*TREAAM
Trigger: CATAGCGGCCTCCCTGGTCAAGATGGGCCGGCTGGA...TGCCGGGACCTCCAGCCTGCAGAATGCGTCCAGAAATAAATTCTGTGTCTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308961.5
ENST00000592634.5
CDS-3UTR CAA 90 bp CCGGGCCATGGTGACACATCGGTGTGTCTCAGTCTCTCCTTTGCCCATGGATGCCTCACACCTTGGGTTTaGCAAACACCTCCCAGCCCT +
Preference number: 5 (lower is better)
Translates to: PGHGDTSVCLSLSFAHGCLTPWV*QTPPSP
Trigger: AGGGCTGGGAGGTGTTTGCAAAACCCAAGGTGTGAG...GCATCCATGGGCAAAGGAGAGACTGAGACACACCGATGTGTCACCATGGCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR CAA 90 bp TGTTGCTGTGTGCTCTGCCTGGACCAGCCTCCCGCTGGGTACACATGGAAAAGCTGGAATCGTCTTTCTTaGTGGGGCATCTCTGAGGGG +
Preference number: 5 (lower is better)
Translates to: CCCVLCLDQPPAGYTWKSWNRLS*WGISEG
Trigger: CCCCTCAGAGATGCCCCACAAAGAAAGACGATTCCA...GCTTTTCCATGTGTACCCAGCGGGAGGCTGGTCCAGGCAGAGCACACAGCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CAA 90 bp GGTGGTCAGGACAGTGAGGGGAACAGCATTCCACGCAGTGCACTGCCCATGCAAAGGGACTCACACTCTTaGAAGAGAGACAGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: GGQDSEGNSIPRSALPMQRDSHS*KRDREA
Trigger: AGCCTCCCTGTCTCTCTTCAAAGAGTGTGAGTCCCT...TTGCATGGGCAGTGCACTGCGTGGAATGCTGTTCCCCTCACTGTCCTGACCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS-3UTR CAA 90 bp CCGGGCCATGGTGACACATCGGTGTGTCTCAGTCTCTCCTTTGCCCATGGATGCAGGCTGCTTTACTTCTaGTCCGGGATGGAACAGAGA +
Preference number: 5 (lower is better)
Translates to: PGHGDTSVCLSLSFAHGCRLLYF*SGMEQR
Trigger: TCTCTGTTCCATCCCGGACAAGAAGTAAAGCAGCCT...GCATCCATGGGCAAAGGAGAGACTGAGACACACCGATGTGTCACCATGGCCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS GCA 90 bp GCCCTTATTCCCATTTACCAGGTGGGAAAGCTGAGGCCTGGGTGCTaGCGTCCTCTGAGGACAGAACAAGGAAAGAATCAAGTTCTGGGG +
Preference number: 5 (lower is better)
Translates to: ALIPIYQVGKLRPGC*RPLRTEQGKNQVLG
Trigger: CCCCAGAACTTGATTCTTTCCTTGTTCTGTCCTCAGAGGACGGCAGCACCCAGGCCTCAGCTTTCCCACCTGGTAAATGGGAATAAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS GCA 90 bp TCCTTGCTTCAGAGACCCCTAGGAGCAGGTCAGCCGACCTGGACTTaGAGCCCAGCTTCAAATGACCCTGGAGCAGTTAATATGCTTCTC +
Preference number: 5 (lower is better)
Translates to: SLLQRPLGAGQPTWT*SPASNDPGAVNMLL
Trigger: GAGAAGCATATTAACTGCTCCAGGGTCATTTGAAGCTGGGCTGCAAGTCCAGGTCGGCTGACCTGCTCCTAGGGGTCTCTGAAGCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593233.1
ENST00000650663.1
CDS CCA 90 bp CTGAGGGGCCCTTATTCCCATTTACCAGGTGGGAAAGCTGAGGCCTaGGTGCTGCCGTCCTCTGAGGACAGAACAAGGAAAGAATCAAGT +
Preference number: 5 (lower is better)
Translates to: LRGPYSHLPGGKAEA*VLPSSEDRTRKESS
Trigger: ACTTGATTCTTTCCTTGTTCTGTCCTCAGAGGACGGCAGCACCCAGGCCTCAGCTTTCCCACCTGGTAAATGGGAATAAGGGCCCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CAA 90 bp CGTGAGTGGATGGGATGCCTGCAGGGAGGTGGAATCGTCTTTCTTTGTGGGGCATGCAGTGAACGTGTATaGTCCAACCTTAGCCACTCC +
Preference number: 5 (lower is better)
Translates to: REWMGCLQGGGIVFLCGACSERV*SNLSHS
Trigger: GGAGTGGCTAAGGTTGGACAATACACGTTCACTGCA...TGCCCCACAAAGAAAGACGATTCCACCTCCCTGCAGGCATCCCATCCACTCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS-3UTR CAA 90 bp ACAGACACAGAATTTATTTCTGGACGCATTCTGCAGGCTGGAGGTCCCGGCAGGCTCACACCTTGGGTTTaGCAAACACCTCCCAGCCCT +
Preference number: 5 (lower is better)
Translates to: TDTEFISGRILQAGGPGRLTPWV*QTPPSP
Trigger: AGGGCTGGGAGGTGTTTGCAAAACCCAAGGTGTGAG...CCTGCCGGGACCTCCAGCCTGCAGAATGCGTCCAGAAATAAATTCTGTGTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308961.5
ENST00000592634.5
CDS CCA 90 bp GAACATTCCTTGCTTCAGAGACCCCTAGGAGCAGGTCAGCCGACCTaGACTTGCAGCCCAGCTTCAAATGACCCTGGAGCAGTTAATATG +
Preference number: 5 (lower is better)
Translates to: EHSLLQRPLGAGQPT*TCSPASNDPGAVNM
Trigger: CATATTAACTGCTCCAGGGTCATTTGAAGCTGGGCTGCAAGTCCAGGTCGGCTGACCTGCTCCTAGGGGTCTCTGAAGCAAGGAATGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593233.1
ENST00000650663.1
CDS-3UTR CAA 90 bp ACACAGACACAGAATTTATTTCTGGACGCATTCTGCAGGCTGGAGGTCCCGGCATGCAGTGAACGTGTATaGTCCAACCTTAGCCACTCC +
Preference number: 5 (lower is better)
Translates to: TQTQNLFLDAFCRLEVPACSERV*SNLSHS
Trigger: GGAGTGGCTAAGGTTGGACAATACACGTTCACTGCA...TGCCGGGACCTCCAGCCTGCAGAATGCGTCCAGAAATAAATTCTGTGTCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308961.5
ENST00000592634.5
CDS-3UTR CAA 90 bp ATTAAGTCACTCAGGAAGAGGGCCCTAGACTCTGGAGATGTGGAAACTGATGCATGCAGTGAACGTGTATaGTCCAACCTTAGCCACTCC +
Preference number: 5 (lower is better)
Translates to: IKSLRKRALDSGDVETDACSERV*SNLSHS
Trigger: GGAGTGGCTAAGGTTGGACAATACACGTTCACTGCA...TGCATCAGTTTCCACATCTCCAGAGTCTAGGGCCCTCTTCCTGAGTGACTTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592634.5
CDS CCA 72 bp TGGACATGGATCGCGCGCACGCGCCGGGGACCGGCCTaGAGGAAGAGAGTAGCACGTGCATCCCCAGGCCGA +
Preference number: 6 (lower is better)
Translates to: WTWIARTRRGPA*RKRVARASPGR
Trigger: TCGGCCTGGGGATGCACGTGCTACTCTCTTCCTCCAGGCCGGTCCCCGGCGCGTGCGCGCGATCCATGTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591160.1
CDS GCA 72 bp CGGCGGTCAGGCCAGCGACGCTGGCAATACTGGTGGTaGTGTAGGCTTTGCGGTGGCAATCGGTGCCATCGG +
Preference number: 6 (lower is better)
Translates to: RRSGQRRWQYWW*CRLCGGNRCHR
Trigger: CCGATGGCACCGATTGCCACCGCAAAGCCTACAGCACCACCAGTATTGCCAGCGTCGCTGGCCTGACCGCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308961.5
ENST00000418389.6
ENST00000592634.5
CDS CCA 72 bp CAGCGGCGGTCAGGCCAGCGACGCTGGCAATACTGGTaGTGCTGTAGGCTTTGCGGTGGCAATCGGTGCCAT +
Preference number: 6 (lower is better)
Translates to: QRRSGQRRWQYW*CCRLCGGNRCH
Trigger: ATGGCACCGATTGCCACCGCAAAGCCTACAGCACCACCAGTATTGCCAGCGTCGCTGGCCTGACCGCCGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308961.5
ENST00000418389.6
ENST00000592634.5
CDS GCA 72 bp CCCAACCTGTGGCAGCGACGCTGGCAATACTGGTGGTaGTGTAGGCTTTGCGGTGGCAATCGGTGCCATCGG +
Preference number: 6 (lower is better)
Translates to: PNLWQRRWQYWW*CRLCGGNRCHR
Trigger: CCGATGGCACCGATTGCCACCGCAAAGCCTACAGCACCACCAGTATTGCCAGCGTCGCTGCCACAGGTTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591160.1
CDS CCA 72 bp AGCATTCCACGCAGTGCACTGCCCATGCAAAGGCCCTaGGGCAGGACTGTACTGCGTGCTCCCAGAGTCAGG +
Preference number: 6 (lower is better)
Translates to: SIPRSALPMQRP*GRTVLRAPRVR
Trigger: CCTGACTCTGGGAGCACGCAGTACAGTCCTGCCCCAGGGCCTTTGCATGGGCAGTGCACTGCGTGGAATGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650663.1
CDS GCA 72 bp CAGCGACGCTGGCAATACTGGTGGTGCTGTAGGCTTTaGGGTGGCAATCGGTGCCATCGGGGATATCCCAGT +
Preference number: 6 (lower is better)
Translates to: QRRWQYWWCCRL*GGNRCHRGYPS
Trigger: ACTGGGATATCCCCGATGGCACCGATTGCCACCGCAAAGCCTACAGCACCACCAGTATTGCCAGCGTCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308961.5
ENST00000418389.6
ENST00000591160.1
ENST00000592634.5
ENST00000593233.1
ENST00000650663.1
CDS GCA 72 bp TTCAGTCCCTACCAGCGACGCTGGCAATACTGGTGGTaGTGTAGGCTTTGCGGTGGCAATCGGTGCCATCGG +
Preference number: 6 (lower is better)
Translates to: FSPYQRRWQYWW*CRLCGGNRCHR
Trigger: CCGATGGCACCGATTGCCACCGCAAAGCCTACAGCACCACCAGTATTGCCAGCGTCGCTGGTAGGGACTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593233.1
ENST00000650663.1
CDS CCA 72 bp CCAACCTTCAGTCCCTACCAGCGACGCTGGCAATACTaGTGGTGCTGTAGGCTTTGCGGTGGCAATCGGTGC +
Preference number: 6 (lower is better)
Translates to: PTFSPYQRRWQY*WCCRLCGGNRC
Trigger: GCACCGATTGCCACCGCAAAGCCTACAGCACCACCAGTATTGCCAGCGTCGCTGGTAGGGACTGAAGGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593233.1
ENST00000650663.1
CDS CCA 72 bp AGTCCCAACCTGTGGCAGCGACGCTGGCAATACTGGTaGTGCTGTAGGCTTTGCGGTGGCAATCGGTGCCAT +
Preference number: 6 (lower is better)
Translates to: SPNLWQRRWQYW*CCRLCGGNRCH
Trigger: ATGGCACCGATTGCCACCGCAAAGCCTACAGCACCACCAGTATTGCCAGCGTCGCTGCCACAGGTTGGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591160.1
CDS CCA 72 bp ATGAGTCCCAACCTGTGGCAGCGACGCTGGCAATACTaGTGGTGCTGTAGGCTTTGCGGTGGCAATCGGTGC +
Preference number: 6 (lower is better)
Translates to: MSPNLWQRRWQY*WCCRLCGGNRC
Trigger: GCACCGATTGCCACCGCAAAGCCTACAGCACCACCAGTATTGCCAGCGTCGCTGCCACAGGTTGGGACTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591160.1
CDS TCA 72 bp CGGTGGCAATCGGTGCCATCGGGGATATCCCAGTACTaGCGAAAAACCTTCGGCGCCATAGCCCGCAATCTC +
Preference number: 6 (lower is better)
Translates to: RWQSVPSGISQY*RKTFGAIARNL
Trigger: GAGATTGCGGGCTATGGCGCCGAAGGTTTTTCGTCAGTACTGGGATATCCCCGATGGCACCGATTGCCACCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000308961.5
ENST00000418389.6
ENST00000591160.1
ENST00000592634.5
ENST00000593233.1
ENST00000650663.1
CDS CCA 72 bp ACCTTCAGTCCCTACCAGCGACGCTGGCAATACTGGTaGTGCTGTAGGCTTTGCGGTGGCAATCGGTGCCAT +
Preference number: 6 (lower is better)
Translates to: TFSPYQRRWQYW*CCRLCGGNRCH
Trigger: ATGGCACCGATTGCCACCGCAAAGCCTACAGCACCACCAGTATTGCCAGCGTCGCTGGTAGGGACTGAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593233.1
ENST00000650663.1
CDS CCA 72 bp TTGCTTCAGAGACCCCTAGGAGCAGGTCAGCCGACCTaGACTTGCAGCCCAGCTTCAAATGACCCTGGAGCA +
Preference number: 6 (lower is better)
Translates to: LLQRPLGAGQPT*TCSPASNDPGA
Trigger: TGCTCCAGGGTCATTTGAAGCTGGGCTGCAAGTCCAGGTCGGCTGACCTGCTCCTAGGGGTCTCTGAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593233.1
ENST00000650663.1
CDS GCA 72 bp CAGAGACCCCTAGGAGCAGGTCAGCCGACCTGGACTTaGAGCCCAGCTTCAAATGACCCTGGAGCAGTTAAT +
Preference number: 6 (lower is better)
Translates to: QRPLGAGQPTWT*SPASNDPGAVN
Trigger: ATTAACTGCTCCAGGGTCATTTGAAGCTGGGCTGCAAGTCCAGGTCGGCTGACCTGCTCCTAGGGGTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593233.1
ENST00000650663.1
CDS CCA 72 bp GAACCCAGAGTGTTTAACAATGACTCTATTAGGGCTTaGACAGGTGTCAGGGCCCCTGCCCCTCTGGGTGCG +
Preference number: 6 (lower is better)
Translates to: EPRVFNNDSIRA*TGVRAPAPLGA
Trigger: CGCACCCAGAGGGGCAGGGGCCCTGACACCTGTCCAAGCCCTAATAGAGTCATTGTTAAACACTCTGGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418389.6
CDS GCA 72 bp CCAGGCCGATTCCTAGAGGGTGAAACTGAGGACGACTaGGATCAGTGCAGACAGATTTCGCTAGTCCCAGCT +
Preference number: 6 (lower is better)
Translates to: PGRFLEGETEDD*DQCRQISLVPA
Trigger: AGCTGGGACTAGCGAAATCTGTCTGCACTGATCGCAGTCGTCCTCAGTTTCACCCTCTAGGAATCGGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591160.1
CDS CAA 72 bp AAACACGGCCCCGACAGCAGCTGCAGTGAACGTGTATaGTCCAACCTTAGCCACTCCTTCAAGGAAGGTGCC +
Preference number: 6 (lower is better)
Translates to: KHGPDSSCSERV*SNLSHSFKEGA
Trigger: GGCACCTTCCTTGAAGGAGTGGCTAAGGTTGGACAATACACGTTCACTGCAGCTGCTGTCGGGGCCGTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308961.5
ENST00000418389.6
ENST00000592634.5
ENST00000593233.1
ENST00000650663.1
CDS GCA 72 bp TACTGGTGGTGCTGTAGGCTTTGCGGTGGCAATCGGTaGCATCGGGGATATCCCAGTACTGACGAAAAACCT +
Preference number: 6 (lower is better)
Translates to: YWWCCRLCGGNR*HRGYPSTDEKP
Trigger: AGGTTTTTCGTCAGTACTGGGATATCCCCGATGGCACCGATTGCCACCGCAAAGCCTACAGCACCACCAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000308961.5
ENST00000418389.6
ENST00000591160.1
ENST00000592634.5
ENST00000593233.1
ENST00000650663.1
CDS GCA 72 bp GCAGCCCAGCTTCAAATGACCCTGGAGCAGTTAATATaGTTCTCCAACCTTCAGTCCCTACCAGCGACGCTG +
Preference number: 6 (lower is better)
Translates to: AAQLQMTLEQLI*FSNLQSLPATL
Trigger: CAGCGTCGCTGGTAGGGACTGAAGGTTGGAGAAGCATATTAACTGCTCCAGGGTCATTTGAAGCTGGGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593233.1
ENST00000650663.1