RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NDRG3 (Homo sapiens)

Ensembl gene IDs: ENSG00000101079

Ensembl transcript IDs: ENST00000349004.6, ENST00000359675.6, ENST00000373773.7, ENST00000373803.6, ENST00000422536.2

Found 398 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGGGAGCACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTaGTCAGCTAAAGATGTTGGAATGTTACAGTATGGCATGGAAGTG +
Preference number: 1 (lower is better)
Translates to: GGAREKAGKRGYGEI*SAKDVGMLQYGMEV
Trigger: CACTTCCATGCCATACTGTAACATTCCAACATCTTTAGCTGATCAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTGCTCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR CCA 90 bp CGCACACACAGAGTCGGGATCAAAGAATCTTATCTGATACATAGTTaGGGGAGCACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGAT +
Preference number: 1 (lower is better)
Translates to: RTHRVGIKESYLIHS*GSTGKSWQERIWRD
Trigger: ATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTGCTCCCCCAACTATGTATCAGATAAGATTCTTTGATCCCGACTCTGTGTGTGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR CCA 90 bp GAATGGAGACACACTCTCTGTCACAGACCTAAGAGGCACTTCTTGTaGATATGTGGATGTCTGGTATCAGATACTGCAGCGACAGCAGTT +
Preference number: 1 (lower is better)
Translates to: EWRHTLCHRPKRHFL*ICGCLVSDTAATAV
Trigger: AACTGCTGTCGCTGCAGTATCTGATACCAGACATCCACATATCCACAAGAAGTGCCTCTTAGGTCTGTGACAGAGAGTGTGTCTCCATTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR CCA 90 bp ACTCCCTCACCTAACAGTAGACATGAGGCTGAAAACAACTTTACCTaGACAGGGCTACCCCTACAGATTGGCCCTTTCTCTCCTACAAAA +
Preference number: 1 (lower is better)
Translates to: TPSPNSRHEAENNFT*TGLPLQIGPFSPTK
Trigger: TTTTGTAGGAGAGAAAGGGCCAATCTGTAGGGGTAGCCCTGTCCAGGTAAAGTTGTTTTCAGCCTCATGTCTACTGTTAGGTGAGGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR TCA 90 bp TCTCCACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTaGCTCCCTCACCTAACAGTAGACATGAGGCTGAAAACAACTTTA +
Preference number: 1 (lower is better)
Translates to: SPQFSHPPAILSVWL*LPHLTVDMRLKTTL
Trigger: TAAAGTTGTTTTCAGCCTCATGTCTACTGTTAGGTGAGGGAGTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR-3UTR GCA 90 bp GACATGAGGCTGAAAACAACTTTACCTGGACAGGGCTACCCCTACAGATTGGCCCCAGGGGGCAGAGGTTaGAGTGAGCCAAGTTTGCGC +
Preference number: 2 (lower is better)
Translates to: DMRLKTTLPGQGYPYRLAPGGRG*SEPSLR
Trigger: GCGCAAACTTGGCTCACTGCAACCTCTGCCCCCTGG...GGCCAATCTGTAGGGGTAGCCCTGTCCAGGTAAAGTTGTTTTCAGCCTCATGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR-3UTR TCA 90 bp CCTGGACAGGGCTACCCCTACAGATTGGCCCTTTCTCTCCTACAAAAGGGAGTTCCCCTTTCTGGGAACTaGGGAATGGAGACACACTCT +
Preference number: 2 (lower is better)
Translates to: PGQGYPYRLALSLLQKGVPLSGN*GMETHS
Trigger: AGAGTGTGTCTCCATTCCTCAGTTCCCAGAAAGGGG...AACTCCCTTTTGTAGGAGAGAAAGGGCCAATCTGTAGGGGTAGCCCTGTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR-3UTR CCA 90 bp CACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTGACTCCCTCACCAGGATGGACTTGCAATaGTCCAGGGGAGGAGCATCT +
Preference number: 2 (lower is better)
Translates to: HNSLTLQQYSLSGCDSLTRMDLQ*SRGGAS
Trigger: AGATGCTCCTCCCCTGGACCATTGCAAGTCCATCCT...GGTGAGGGAGTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR-3UTR CCA 90 bp CCTGGACAGGGCTACCCCTACAGATTGGCCCTTTCTCTCCTACAAAAGGGAGTTTCAGAACCTCAGCGATaGTTCATGGGCTTCCAGCAG +
Preference number: 2 (lower is better)
Translates to: PGQGYPYRLALSLLQKGVSEPQR*FMGFQQ
Trigger: CTGCTGGAAGCCCATGAACCATCGCTGAGGTTCTGA...AACTCCCTTTTGTAGGAGAGAAAGGGCCAATCTGTAGGGGTAGCCCTGTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR-3UTR GCA 90 bp TGGACAGGGCTACCCCTACAGATTGGCCCTTTCTCTCCTACAAAAGGGAGTTCACAGCGACAGCAGTTTTaGTCTTCAGAGCAGAGGCCT +
Preference number: 2 (lower is better)
Translates to: WTGLPLQIGPFSPTKGSSQRQQF*SSEQRP
Trigger: AGGCCTCTGCTCTGAAGAGCAAAACTGCTGTCGCTG...TGAACTCCCTTTTGTAGGAGAGAAAGGGCCAATCTGTAGGGGTAGCCCTGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR-3UTR GCA 90 bp TGGACAGGGCTACCCCTACAGATTGGCCCTTTCTCTCCTACAAAAGGGAGTTCACCAAGTTTGCGCCATTaGACTCCAGCCTGGGTAACA +
Preference number: 2 (lower is better)
Translates to: WTGLPLQIGPFSPTKGSSPSLRH*TPAWVT
Trigger: TGTTACCCAGGCTGGAGTGCAATGGCGCAAACTTGG...TGAACTCCCTTTTGTAGGAGAGAAAGGGCCAATCTGTAGGGGTAGCCCTGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR-3UTR GCA 90 bp GTGACTCCCTCACCTAACAGTAGACATGAGGCTGAAAACAACTTTACCTGGACACCAGGGGGCAGAGGTTaGAGTGAGCCAAGTTTGCGC +
Preference number: 2 (lower is better)
Translates to: VTPSPNSRHEAENNFTWTPGGRG*SEPSLR
Trigger: GCGCAAACTTGGCTCACTGCAACCTCTGCCCCCTGG...TGTCCAGGTAAAGTTGTTTTCAGCCTCATGTCTACTGTTAGGTGAGGGAGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR-3UTR CCA 90 bp TGGACAGGGCTACCCCTACAGATTGGCCCTTTCTCTCCTACAAAAGGGAGTTCAAGGATGGACTTGCAATaGTCCAGGGGAGGAGCATCT +
Preference number: 2 (lower is better)
Translates to: WTGLPLQIGPFSPTKGSSRMDLQ*SRGGAS
Trigger: AGATGCTCCTCCCCTGGACCATTGCAAGTCCATCCT...TGAACTCCCTTTTGTAGGAGAGAAAGGGCCAATCTGTAGGGGTAGCCCTGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR-3UTR CCA 90 bp GTTGGTCTCCACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTGACTCAGAACCTCAGCGATaGTTCATGGGCTTCCAGCAG +
Preference number: 2 (lower is better)
Translates to: VGLHNSLTLQQYSLSGCDSEPQR*FMGFQQ
Trigger: CTGCTGGAAGCCCATGAACCATCGCTGAGGTTCTGA...GTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTGGAGACCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR-3UTR CCA 90 bp CACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTGACTCCCTCACCCTGGGAACTGAGGAATaGAGACACACTCTCTGTCAC +
Preference number: 2 (lower is better)
Translates to: HNSLTLQQYSLSGCDSLTLGTEE*RHTLCH
Trigger: GTGACAGAGAGTGTGTCTCCATTCCTCAGTTCCCAG...GGTGAGGGAGTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR-3UTR CCA 90 bp CCTGGACAGGGCTACCCCTACAGATTGGCCCTTTCTCTCCTACAAAAGGGAGTTAACCTCTCCCCTTTCTaGGAACTGAGGAATGGAGAC +
Preference number: 2 (lower is better)
Translates to: PGQGYPYRLALSLLQKGVNLSPF*ELRNGD
Trigger: GTCTCCATTCCTCAGTTCCCAGAAAGGGGAGAGGTT...AACTCCCTTTTGTAGGAGAGAAAGGGCCAATCTGTAGGGGTAGCCCTGTCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR-3UTR GCA 90 bp CATAGTTGGGGGAGCACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGTTTGAAGGATGGACTTaGAATGGTCCAGGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: HSWGSTGKSWQERIWRDLFEGWT*NGPGEE
Trigger: CTCCTCCCCTGGACCATTGCAAGTCCATCCTTCAAA...CAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTGCTCCCCCAACTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR TCA 90 bp GGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGAGGCCTGGCATTCAGTGGCCATGCATaGGTTAAAGATAGTAGAGGC +
Preference number: 2 (lower is better)
Translates to: GIRYCSDSSFALQSRGLAFSGHA*VKDSRG
Trigger: GCCTCTACTATCTTTAACTCATGCATGGCCACTGAA...TGCCAGGCCTCTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR GCA 90 bp GGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGAGGCCTGGCAGCAAACAAAAGAGAATaGAGTGGCCTACCCAACCTA +
Preference number: 2 (lower is better)
Translates to: GIRYCSDSSFALQSRGLAANKRE*SGLPNL
Trigger: TAGGTTGGGTAGGCCACTGCATTCTCTTTTGTTTGC...TGCCAGGCCTCTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR GCA 90 bp CCTGGACAGGGCTACCCCTACAGATTGGCCCTTTCTCTCCTACAAAAGGGAGTTTCTCCCCCATCTACATaGTTTTTAGGCCAAACCTCT +
Preference number: 2 (lower is better)
Translates to: PGQGYPYRLALSLLQKGVSPPST*FLGQTS
Trigger: AGAGGTTTGGCCTAAAAAGCATGTAGATGGGGGAGA...AACTCCCTTTTGTAGGAGAGAAAGGGCCAATCTGTAGGGGTAGCCCTGTCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR-3UTR CCA 90 bp CACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTGACTCCCTCACCTATCTGATACATAGTTaGGGGAGCACGGGAAAAAGC +
Preference number: 2 (lower is better)
Translates to: HNSLTLQQYSLSGCDSLTYLIHS*GSTGKS
Trigger: GCTTTTTCCCGTGCTCCCCCAACTATGTATCAGATA...GGTGAGGGAGTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR-3UTR CCA 90 bp TGTGGTAGTTGGTCTCCACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGGGAACTGAGGAATaGAGACACACTCTCTGTCAC +
Preference number: 2 (lower is better)
Translates to: CGSWSPQFSHPPAILSVWLGTEE*RHTLCH
Trigger: GTGACAGAGAGTGTGTCTCCATTCCTCAGTTCCCAG...CCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTGGAGACCAACTACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR-3UTR CCA 90 bp TGTGGTAGTTGGTCTCCACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGAACCTCTCCCCTTTCTaGGAACTGAGGAATGGAGAC +
Preference number: 2 (lower is better)
Translates to: CGSWSPQFSHPPAILSVWNLSPF*ELRNGD
Trigger: GTCTCCATTCCTCAGTTCCCAGAAAGGGGAGAGGTT...CCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTGGAGACCAACTACCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR CAA 90 bp GAGGAATGGAGACACACTCTCTGTCACAGACCTAAGAGGCACTTCTaGTGGATATGTGGATGTCTGGTATCAGATACTGCAGCGACAGCA +
Preference number: 2 (lower is better)
Translates to: EEWRHTLCHRPKRHF*WICGCLVSDTAATA
Trigger: TGCTGTCGCTGCAGTATCTGATACCAGACATCCACATATCCACAAGAAGTGCCTCTTAGGTCTGTGACAGAGAGTGTGTCTCCATTCCTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR TCA 90 bp GTTGGTCTCCACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTGACTATGGAGTGGTCATTTaGAGGATGGACTTGCAATGG +
Preference number: 2 (lower is better)
Translates to: VGLHNSLTLQQYSLSGCDYGVVI*RMDLQW
Trigger: CCATTGCAAGTCCATCCTTCAAATGACCACTCCATA...GTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTGGAGACCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR-3UTR TCA 90 bp CATAGTTGGGGGAGCACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGTATGGAGTGGTCATTTaGAGGATGGACTTGCAATGG +
Preference number: 2 (lower is better)
Translates to: HSWGSTGKSWQERIWRDLYGVVI*RMDLQW
Trigger: CCATTGCAAGTCCATCCTTCAAATGACCACTCCATA...CAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTGCTCCCCCAACTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR GCA 90 bp CAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTATTTTGAAGGATGGACTTaGAATGGTCCAGGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: QAPFCYWSQSINGPDGNYFEGWT*NGPGEE
Trigger: CTCCTCCCCTGGACCATTGCAAGTCCATCCTTCAAA...ATAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR GCA 90 bp ACAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTATTTGAAGGATGGACTTaGAATGGTCCAGGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: TGTLLLLVTINQWSRRQLFEGWT*NGPGEE
Trigger: CTCCTCCCCTGGACCATTGCAAGTCCATCCTTCAAA...TAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR GCA 90 bp TGGACAGGGCTACCCCTACAGATTGGCCCTTTCTCTCCTACAAAAGGGAGTTCAGCAAACAAAAGAGAATaGAGTGGCCTACCCAACCTA +
Preference number: 2 (lower is better)
Translates to: WTGLPLQIGPFSPTKGSSANKRE*SGLPNL
Trigger: TAGGTTGGGTAGGCCACTGCATTCTCTTTTGTTTGC...TGAACTCCCTTTTGTAGGAGAGAAAGGGCCAATCTGTAGGGGTAGCCCTGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR-3UTR GCA 90 bp GACATGAGGCTGAAAACAACTTTACCTGGACAGGGCTACCCCTACAGATTGGCCTCTCCCCCATCTACATaGTTTTTAGGCCAAACCTCT +
Preference number: 2 (lower is better)
Translates to: DMRLKTTLPGQGYPYRLASPPST*FLGQTS
Trigger: AGAGGTTTGGCCTAAAAAGCATGTAGATGGGGGAGA...GGCCAATCTGTAGGGGTAGCCCTGTCCAGGTAAAGTTGTTTTCAGCCTCATGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR-3UTR CCA 90 bp GGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGAGGCCTGGCATGTTACAGTATGGCATaGAAGTGGTTCTTGGGCTAT +
Preference number: 2 (lower is better)
Translates to: GIRYCSDSSFALQSRGLACYSMA*KWFLGY
Trigger: ATAGCCCAAGAACCACTTCCATGCCATACTGTAACA...TGCCAGGCCTCTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR CCA 90 bp GTTGGTCTCCACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTGACGCACCCTTCTGCTACTaGTCACAATCAATCAATGGT +
Preference number: 2 (lower is better)
Translates to: VGLHNSLTLQQYSLSGCDAPFCY*SQSING
Trigger: ACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGC...GTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTGGAGACCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR-3UTR CCA 90 bp CAGAGCAGAGGCCTGGCATTTTGTTTCCACCTTCCTGTGCTAAGAGAGTCCAGTGCACCCTTCTGCTACTaGTCACAATCAATCAATGGT +
Preference number: 2 (lower is better)
Translates to: QSRGLAFCFHLPVLRESSAPFCY*SQSING
Trigger: ACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGC...ACTGGACTCTCTTAGCACAGGAAGGTGGAAACAAAATGCCAGGCCTCTGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR TCA 90 bp GTGGATGTCTGGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGTATGGAGTGGTCATTTaGAGGATGGACTTGCAATGG +
Preference number: 2 (lower is better)
Translates to: VDVWYQILQRQQFCSSEQYGVVI*RMDLQW
Trigger: CCATTGCAAGTCCATCCTTCAAATGACCACTCCATA...CTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACCAGACATCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR TCA 90 bp TTTGGACAGAAGGAGCCTCTCTATGTAACAGGCACCCTTCTGCTACTGGTCACATTCAGTGGCCATGCATaGGTTAAAGATAGTAGAGGC +
Preference number: 2 (lower is better)
Translates to: FGQKEPLYVTGTLLLLVTFSGHA*VKDSRG
Trigger: GCCTCTACTATCTTTAACTCATGCATGGCCACTGAA...TGTGACCAGTAGCAGAAGGGTGCCTGTTACATAGAGAGGCTCCTTCTGTCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR TCA 90 bp GTTGGTCTCCACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTGACGGATATGGAGAGATCTaGTCAGCTAAAGATGTTGGA +
Preference number: 2 (lower is better)
Translates to: VGLHNSLTLQQYSLSGCDGYGEI*SAKDVG
Trigger: TCCAACATCTTTAGCTGATCAGATCTCTCCATATCC...GTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTGGAGACCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR-3UTR TCA 90 bp CAGAGCAGAGGCCTGGCATTTTGTTTCCACCTTCCTGTGCTAAGAGAGTCCAGTGGATATGGAGAGATCTaGTCAGCTAAAGATGTTGGA +
Preference number: 2 (lower is better)
Translates to: QSRGLAFCFHLPVLRESSGYGEI*SAKDVG
Trigger: TCCAACATCTTTAGCTGATCAGATCTCTCCATATCC...ACTGGACTCTCTTAGCACAGGAAGGTGGAAACAAAATGCCAGGCCTCTGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR TCA 90 bp TGGACAGGGCTACCCCTACAGATTGGCCCTTTCTCTCCTACAAAAGGGAGTTCAGGATATGGAGAGATCTaGTCAGCTAAAGATGTTGGA +
Preference number: 2 (lower is better)
Translates to: WTGLPLQIGPFSPTKGSSGYGEI*SAKDVG
Trigger: TCCAACATCTTTAGCTGATCAGATCTCTCCATATCC...TGAACTCCCTTTTGTAGGAGAGAAAGGGCCAATCTGTAGGGGTAGCCCTGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR-3UTR CCA 90 bp ACTCTATGTTGTATCAGAACCTCAGCGATGGTTCATGGGCTTCCAGCAGAATATAGGATGGACTTGCAATaGTCCAGGGGAGGAGCATCT +
Preference number: 2 (lower is better)
Translates to: TLCCIRTSAMVHGLPAEYRMDLQ*SRGGAS
Trigger: AGATGCTCCTCCCCTGGACCATTGCAAGTCCATCCT...ATATTCTGCTGGAAGCCCATGAACCATCGCTGAGGTTCTGATACAACATAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR CCA 90 bp ACAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTATGGTCATTTGAAGGATaGACTTGCAATGGTCCAGGG +
Preference number: 2 (lower is better)
Translates to: TGTLLLLVTINQWSRRQLWSFEG*TCNGPG
Trigger: CCCTGGACCATTGCAAGTCCATCCTTCAAATGACCA...TAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR TCA 90 bp TGGACAGGGCTACCCCTACAGATTGGCCCTTTCTCTCCTACAAAAGGGAGTTCATCAAAGAATCTTATCTaGTACATAGTTGGGGGAGCA +
Preference number: 2 (lower is better)
Translates to: WTGLPLQIGPFSPTKGSSSKNLI*YIVGGA
Trigger: TGCTCCCCCAACTATGTATCAGATAAGATTCTTTGA...TGAACTCCCTTTTGTAGGAGAGAAAGGGCCAATCTGTAGGGGTAGCCCTGTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR-3UTR TCA 90 bp CACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTGACTCCCTCACCAAAGCTGCTCTCTCCTaGAATCACTTTGCAAATTTT +
Preference number: 2 (lower is better)
Translates to: HNSLTLQQYSLSGCDSLTKAALS*NHFANF
Trigger: AAAATTTGCAAAGTGATTTCAGGAGAGAGCAGCTTT...GGTGAGGGAGTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR-3UTR TCA 90 bp GTTGGTCTCCACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTGACTCCAGACGGCAATTATaGTTTTCCACATTCCTCAAA +
Preference number: 2 (lower is better)
Translates to: VGLHNSLTLQQYSLSGCDSRRQL*FSTFLK
Trigger: TTTGAGGAATGTGGAAAATCATAATTGCCGTCTGGA...GTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTGGAGACCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR-3UTR TCA 90 bp CAGAGCAGAGGCCTGGCATTTTGTTTCCACCTTCCTGTGCTAAGAGAGTCCAGTTCCAGACGGCAATTATaGTTTTCCACATTCCTCAAA +
Preference number: 2 (lower is better)
Translates to: QSRGLAFCFHLPVLRESSSRRQL*FSTFLK
Trigger: TTTGAGGAATGTGGAAAATCATAATTGCCGTCTGGA...ACTGGACTCTCTTAGCACAGGAAGGTGGAAACAAAATGCCAGGCCTCTGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR CCA 90 bp CAGAGCAGAGGCCTGGCATTTTGTTTCCACCTTCCTGTGCTAAGAGAGTCCAGTAGTATGGCATGGAAGTaGTTCTTGGGCTATACAAAA +
Preference number: 2 (lower is better)
Translates to: QSRGLAFCFHLPVLRESSSMAWK*FLGYTK
Trigger: TTTTGTATAGCCCAAGAACCACTTCCATGCCATACT...ACTGGACTCTCTTAGCACAGGAAGGTGGAAACAAAATGCCAGGCCTCTGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR CCA 90 bp CATAGTTGGGGGAGCACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGAGTATGGCATGGAAGTaGTTCTTGGGCTATACAAAA +
Preference number: 2 (lower is better)
Translates to: HSWGSTGKSWQERIWRDLSMAWK*FLGYTK
Trigger: TTTTGTATAGCCCAAGAACCACTTCCATGCCATACT...CAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTGCTCCCCCAACTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR CCA 90 bp ACAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTATATCTGATACATAGTTaGGGGAGCACGGGAAAAAGC +
Preference number: 2 (lower is better)
Translates to: TGTLLLLVTINQWSRRQLYLIHS*GSTGKS
Trigger: GCTTTTTCCCGTGCTCCCCCAACTATGTATCAGATA...TAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR CCA 90 bp GTGGATGTCTGGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGCAAAAGAGAATGCAGTaGCCTACCCAACCTAGAAAT +
Preference number: 2 (lower is better)
Translates to: VDVWYQILQRQQFCSSEQQKRMQ*PTQPRN
Trigger: ATTTCTAGGTTGGGTAGGCCACTGCATTCTCTTTTG...CTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACCAGACATCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR CCA 90 bp GTTGGTCTCCACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTGACCTTCTTGTGGATATGTaGATGTCTGGTATCAGATAC +
Preference number: 2 (lower is better)
Translates to: VGLHNSLTLQQYSLSGCDLLVDM*MSGIRY
Trigger: GTATCTGATACCAGACATCCACATATCCACAAGAAG...GTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTGGAGACCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR-3UTR CCA 90 bp GACATGAGGCTGAAAACAACTTTACCTGGACAGGGCTACCCCTACAGATTGGCCCTTCTTGTGGATATGTaGATGTCTGGTATCAGATAC +
Preference number: 2 (lower is better)
Translates to: DMRLKTTLPGQGYPYRLALLVDM*MSGIRY
Trigger: GTATCTGATACCAGACATCCACATATCCACAAGAAG...GGCCAATCTGTAGGGGTAGCCCTGTCCAGGTAAAGTTGTTTTCAGCCTCATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR-3UTR TCA 90 bp CACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGATCAGCTAAAGATGTATGGAGTGGTCATTTaGAGGATGGACTTGCAATGG +
Preference number: 2 (lower is better)
Translates to: HGKKLAREDMERSDQLKMYGVVI*RMDLQW
Trigger: CCATTGCAAGTCCATCCTTCAAATGACCACTCCATA...CATCTTTAGCTGATCAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR TCA 90 bp ACAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTAGGATATGGAGAGATCTaGTCAGCTAAAGATGTTGGA +
Preference number: 2 (lower is better)
Translates to: TGTLLLLVTINQWSRRQLGYGEI*SAKDVG
Trigger: TCCAACATCTTTAGCTGATCAGATCTCTCCATATCC...TAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR TCA 90 bp GTGGATGTCTGGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGTCCAGACGGCAATTATaGTTTTCCACATTCCTCAAA +
Preference number: 2 (lower is better)
Translates to: VDVWYQILQRQQFCSSEQSRRQL*FSTFLK
Trigger: TTTGAGGAATGTGGAAAATCATAATTGCCGTCTGGA...CTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACCAGACATCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR CCA 90 bp CGCACACACAGAGTCGGGATCAAAGAATCTTATCTGATACATAGTTGGGGGAGCTGTTACAGTATGGCATaGAAGTGGTTCTTGGGCTAT +
Preference number: 2 (lower is better)
Translates to: RTHRVGIKESYLIHSWGSCYSMA*KWFLGY
Trigger: ATAGCCCAAGAACCACTTCCATGCCATACTGTAACA...GCTCCCCCAACTATGTATCAGATAAGATTCTTTGATCCCGACTCTGTGTGTGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR CCA 90 bp GTGACTCCCTCACCTAACAGTAGACATGAGGCTGAAAACAACTTTACCTGGACATATCTGATACATAGTTaGGGGAGCACGGGAAAAAGC +
Preference number: 2 (lower is better)
Translates to: VTPSPNSRHEAENNFTWTYLIHS*GSTGKS
Trigger: GCTTTTTCCCGTGCTCCCCCAACTATGTATCAGATA...TGTCCAGGTAAAGTTGTTTTCAGCCTCATGTCTACTGTTAGGTGAGGGAGTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR-3UTR CCA 90 bp ACAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTACAAAAGAGAATGCAGTaGCCTACCCAACCTAGAAAT +
Preference number: 2 (lower is better)
Translates to: TGTLLLLVTINQWSRRQLQKRMQ*PTQPRN
Trigger: ATTTCTAGGTTGGGTAGGCCACTGCATTCTCTTTTG...TAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR CCA 90 bp CAGAGCAGAGGCCTGGCATTTTGTTTCCACCTTCCTGTGCTAAGAGAGTCCAGTATACAGAAATTCATTTaGACAGAAGGAGCCTCTCTA +
Preference number: 2 (lower is better)
Translates to: QSRGLAFCFHLPVLRESSIQKFI*TEGASL
Trigger: TAGAGAGGCTCCTTCTGTCCAAATGAATTTCTGTAT...ACTGGACTCTCTTAGCACAGGAAGGTGGAAACAAAATGCCAGGCCTCTGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR CCA 90 bp GACATGAGGCTGAAAACAACTTTACCTGGACAGGGCTACCCCTACAGATTGGCCATACAGAAATTCATTTaGACAGAAGGAGCCTCTCTA +
Preference number: 2 (lower is better)
Translates to: DMRLKTTLPGQGYPYRLAIQKFI*TEGASL
Trigger: TAGAGAGGCTCCTTCTGTCCAAATGAATTTCTGTAT...GGCCAATCTGTAGGGGTAGCCCTGTCCAGGTAAAGTTGTTTTCAGCCTCATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR-3UTR TCA 90 bp TTTGGACAGAAGGAGCCTCTCTATGTAACAGGCACCCTTCTGCTACTGGTCACAGGCCAGTTTACTGGATaGAATGTTATATTATGGAGT +
Preference number: 2 (lower is better)
Translates to: FGQKEPLYVTGTLLLLVTGQFTG*NVILWS
Trigger: ACTCCATAATATAACATTTCATCCAGTAAACTGGCC...TGTGACCAGTAGCAGAAGGGTGCCTGTTACATAGAGAGGCTCCTTCTGTCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR TCA 90 bp ACTCTATGTTGTATCAGAACCTCAGCGATGGTTCATGGGCTTCCAGCAGAATATTTCAGTGGCCATGCATaGGTTAAAGATAGTAGAGGC +
Preference number: 2 (lower is better)
Translates to: TLCCIRTSAMVHGLPAEYFSGHA*VKDSRG
Trigger: GCCTCTACTATCTTTAACTCATGCATGGCCACTGAA...ATATTCTGCTGGAAGCCCATGAACCATCGCTGAGGTTCTGATACAACATAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR TCA 90 bp ACAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTATCAAAGAATCTTATCTaGTACATAGTTGGGGGAGCA +
Preference number: 2 (lower is better)
Translates to: TGTLLLLVTINQWSRRQLSKNLI*YIVGGA
Trigger: TGCTCCCCCAACTATGTATCAGATAAGATTCTTTGA...TAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR TCA 90 bp TGTGGTAGTTGGTCTCCACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGAAAGCTGCTCTCTCCTaGAATCACTTTGCAAATTTT +
Preference number: 2 (lower is better)
Translates to: CGSWSPQFSHPPAILSVWKAALS*NHFANF
Trigger: AAAATTTGCAAAGTGATTTCAGGAGAGAGCAGCTTT...CCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTGGAGACCAACTACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR-3UTR GCA 90 bp GTGACTCCCTCACCTAACAGTAGACATGAGGCTGAAAACAACTTTACCTGGACACACATTCCTCAAAGCTaGTCTCTCCTGAAATCACTT +
Preference number: 2 (lower is better)
Translates to: VTPSPNSRHEAENNFTWTHIPQS*SLLKSL
Trigger: AAGTGATTTCAGGAGAGAGCAGCTTTGAGGAATGTG...TGTCCAGGTAAAGTTGTTTTCAGCCTCATGTCTACTGTTAGGTGAGGGAGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR-3UTR CCA 90 bp CACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGATCAGCTAAAGATGTGTTACAGTATGGCATaGAAGTGGTTCTTGGGCTAT +
Preference number: 2 (lower is better)
Translates to: HGKKLAREDMERSDQLKMCYSMA*KWFLGY
Trigger: ATAGCCCAAGAACCACTTCCATGCCATACTGTAACA...CATCTTTAGCTGATCAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR CCA 90 bp GTGACTCCCTCACCTAACAGTAGACATGAGGCTGAAAACAACTTTACCTGGACACAAAAGAGAATGCAGTaGCCTACCCAACCTAGAAAT +
Preference number: 2 (lower is better)
Translates to: VTPSPNSRHEAENNFTWTQKRMQ*PTQPRN
Trigger: ATTTCTAGGTTGGGTAGGCCACTGCATTCTCTTTTG...TGTCCAGGTAAAGTTGTTTTCAGCCTCATGTCTACTGTTAGGTGAGGGAGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR-3UTR CCA 90 bp ACTCTATGTTGTATCAGAACCTCAGCGATGGTTCATGGGCTTCCAGCAGAATATGCACCCTTCTGCTACTaGTCACAATCAATCAATGGT +
Preference number: 2 (lower is better)
Translates to: TLCCIRTSAMVHGLPAEYAPFCY*SQSING
Trigger: ACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGC...ATATTCTGCTGGAAGCCCATGAACCATCGCTGAGGTTCTGATACAACATAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR CAA 90 bp AAGCTGGCAAGAGAGGATATGGAGAGATCTGATCAGCTAAAGATGTaGGAATGTTACAGTATGGCATGGAAGTGGTTCTTGGGCTATACA +
Preference number: 2 (lower is better)
Translates to: KLAREDMERSDQLKM*ECYSMAWKWFLGYT
Trigger: TGTATAGCCCAAGAACCACTTCCATGCCATACTGTAACATTCCAACATCTTTAGCTGATCAGATCTCTCCATATCCTCTCTTGCCAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR TCA 90 bp CACTTCTTGTGGATATGTGGATGTCTGGTATCAGATACTGCAGCGACAGCAGTTTCAAAGAATCTTATCTaGTACATAGTTGGGGGAGCA +
Preference number: 2 (lower is better)
Translates to: HFLWICGCLVSDTAATAVSKNLI*YIVGGA
Trigger: TGCTCCCCCAACTATGTATCAGATAAGATTCTTTGA...AACTGCTGTCGCTGCAGTATCTGATACCAGACATCCACATATCCACAAGAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR TCA 90 bp ACAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTAAAAGCTGCTCTCTCCTaGAATCACTTTGCAAATTTT +
Preference number: 2 (lower is better)
Translates to: TGTLLLLVTINQWSRRQLKAALS*NHFANF
Trigger: AAAATTTGCAAAGTGATTTCAGGAGAGAGCAGCTTT...TAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR CCA 90 bp AAGCTGCTCTCTCCTGAAATCACTTTGCAAATTTTGTTGACCAATTTGCAAACAAGGATGGACTTGCAATaGTCCAGGGGAGGAGCATCT +
Preference number: 2 (lower is better)
Translates to: KLLSPEITLQILLTNLQTRMDLQ*SRGGAS
Trigger: AGATGCTCCTCCCCTGGACCATTGCAAGTCCATCCT...TGTTTGCAAATTGGTCAACAAAATTTGCAAAGTGATTTCAGGAGAGAGCAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR CCA 90 bp CACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGATCAGCTAAAGATGAGTATGGCATGGAAGTaGTTCTTGGGCTATACAAAA +
Preference number: 2 (lower is better)
Translates to: HGKKLAREDMERSDQLKMSMAWK*FLGYTK
Trigger: TTTTGTATAGCCCAAGAACCACTTCCATGCCATACT...CATCTTTAGCTGATCAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR CCA 90 bp ACTCTATGTTGTATCAGAACCTCAGCGATGGTTCATGGGCTTCCAGCAGAATATCAAAAGAGAATGCAGTaGCCTACCCAACCTAGAAAT +
Preference number: 2 (lower is better)
Translates to: TLCCIRTSAMVHGLPAEYQKRMQ*PTQPRN
Trigger: ATTTCTAGGTTGGGTAGGCCACTGCATTCTCTTTTG...ATATTCTGCTGGAAGCCCATGAACCATCGCTGAGGTTCTGATACAACATAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR CAA 90 bp CATTCCTCAAAGCTGCTCTCTCCTGAAATCACTTTGCAAATTTTGTaGACCAATTTGCAAACAAAAGAGAATGCAGTGGCCTACCCAACC +
Preference number: 2 (lower is better)
Translates to: HSSKLLSPEITLQIL*TNLQTKENAVAYPT
Trigger: GGTTGGGTAGGCCACTGCATTCTCTTTTGTTTGCAAATTGGTCAACAAAATTTGCAAAGTGATTTCAGGAGAGAGCAGCTTTGAGGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR CCA 90 bp CACTTCTTGTGGATATGTGGATGTCTGGTATCAGATACTGCAGCGACAGCAGTTATACAGAAATTCATTTaGACAGAAGGAGCCTCTCTA +
Preference number: 2 (lower is better)
Translates to: HFLWICGCLVSDTAATAVIQKFI*TEGASL
Trigger: TAGAGAGGCTCCTTCTGTCCAAATGAATTTCTGTAT...AACTGCTGTCGCTGCAGTATCTGATACCAGACATCCACATATCCACAAGAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR CCA 90 bp AAGCTGCTCTCTCCTGAAATCACTTTGCAAATTTTGTTGACCAATTTGCAAACAAGTATGGCATGGAAGTaGTTCTTGGGCTATACAAAA +
Preference number: 2 (lower is better)
Translates to: KLLSPEITLQILLTNLQTSMAWK*FLGYTK
Trigger: TTTTGTATAGCCCAAGAACCACTTCCATGCCATACT...TGTTTGCAAATTGGTCAACAAAATTTGCAAAGTGATTTCAGGAGAGAGCAGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR CAA 90 bp CACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTGACTCCCTCACCGCAGCGACAGCAGTTTaGCTCTTCAGAGCAGAGGCC +
Preference number: 3 (lower is better)
Translates to: HNSLTLQQYSLSGCDSLTAATAV*LFRAEA
Trigger: GGCCTCTGCTCTGAAGAGCAAAACTGCTGTCGCTGC...GGTGAGGGAGTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR-3UTR CAA 90 bp GTTGGTCTCCACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTGACGCCAAGTTTGCGCCATaGCACTCCAGCCTGGGTAAC +
Preference number: 3 (lower is better)
Translates to: VGLHNSLTLQQYSLSGCDAKFAP*HSSLGN
Trigger: GTTACCCAGGCTGGAGTGCAATGGCGCAAACTTGGC...GTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTGGAGACCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR-3UTR CAA 90 bp GACATGAGGCTGAAAACAACTTTACCTGGACAGGGCTACCCCTACAGATTGGCCGCCAAGTTTGCGCCATaGCACTCCAGCCTGGGTAAC +
Preference number: 3 (lower is better)
Translates to: DMRLKTTLPGQGYPYRLAAKFAP*HSSLGN
Trigger: GTTACCCAGGCTGGAGTGCAATGGCGCAAACTTGGC...GGCCAATCTGTAGGGGTAGCCCTGTCCAGGTAAAGTTGTTTTCAGCCTCATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR TCA 72 bp CTCGCACACACAGAGTCGGGATCAAAGAATCTTATCTaGTACATAGTTGGGGGAGCACGGGAAAAAGCTGGC +
Preference number: 3 (lower is better)
Translates to: LAHTESGSKNLI*YIVGGAREKAG
Trigger: GCCAGCTTTTTCCCGTGCTCCCCCAACTATGTATCAGATAAGATTCTTTGATCCCGACTCTGTGTGTGCGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR TCA 72 bp TTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTaGCTCCCTCACCTAACAGTAGACATGAGGCTGAAA +
Preference number: 3 (lower is better)
Translates to: FSHPPAILSVWL*LPHLTVDMRLK
Trigger: TTTCAGCCTCATGTCTACTGTTAGGTGAGGGAGTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR GCA 72 bp CTTCTTGTGGATATGTGGATGTCTGGTATCAGATACTaGAGCGACAGCAGTTTTGCTCTTCAGAGCAGAGGC +
Preference number: 3 (lower is better)
Translates to: LLVDMWMSGIRY*SDSSFALQSRG
Trigger: GCCTCTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACCAGACATCCACATATCCACAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR CCA 72 bp CACACTCTCTGTCACAGACCTAAGAGGCACTTCTTGTaGATATGTGGATGTCTGGTATCAGATACTGCAGCG +
Preference number: 3 (lower is better)
Translates to: HTLCHRPKRHFL*ICGCLVSDTAA
Trigger: CGCTGCAGTATCTGATACCAGACATCCACATATCCACAAGAAGTGCCTCTTAGGTCTGTGACAGAGAGTGTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR CCA 72 bp CCTAACAGTAGACATGAGGCTGAAAACAACTTTACCTaGACAGGGCTACCCCTACAGATTGGCCCTTTCTCT +
Preference number: 3 (lower is better)
Translates to: PNSRHEAENNFT*TGLPLQIGPFS
Trigger: AGAGAAAGGGCCAATCTGTAGGGGTAGCCCTGTCCAGGTAAAGTTGTTTTCAGCCTCATGTCTACTGTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR-3UTR CAA 90 bp GGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGAGGCCTGGCATATACAGAAATTCATTaGGACAGAAGGAGCCTCTCT +
Preference number: 3 (lower is better)
Translates to: GIRYCSDSSFALQSRGLAYTEIH*DRRSLS
Trigger: AGAGAGGCTCCTTCTGTCCAAATGAATTTCTGTATA...TGCCAGGCCTCTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR CAA 90 bp TTTGGACAGAAGGAGCCTCTCTATGTAACAGGCACCCTTCTGCTACTGGTCACATTATGGAGTGGTCATTaGAAGGATGGACTTGCAATG +
Preference number: 3 (lower is better)
Translates to: FGQKEPLYVTGTLLLLVTLWSGH*KDGLAM
Trigger: CATTGCAAGTCCATCCTTCAAATGACCACTCCATAA...TGTGACCAGTAGCAGAAGGGTGCCTGTTACATAGAGAGGCTCCTTCTGTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR CCA 72 bp ATCTACATGCTTTTTAGGCCAAACCTCTCCCCTTTCTaGGAACTGAGGAATGGAGACACACTCTCTGTCACA +
Preference number: 3 (lower is better)
Translates to: IYMLFRPNLSPF*ELRNGDTLSVT
Trigger: TGTGACAGAGAGTGTGTCTCCATTCCTCAGTTCCCAGAAAGGGGAGAGGTTTGGCCTAAAAAGCATGTAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR CAA 90 bp ACAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTATTATGGAGTGGTCATTaGAAGGATGGACTTGCAATG +
Preference number: 3 (lower is better)
Translates to: TGTLLLLVTINQWSRRQLLWSGH*KDGLAM
Trigger: CATTGCAAGTCCATCCTTCAAATGACCACTCCATAA...TAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR CAA 90 bp TGTGGTAGTTGGTCTCCACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGGATCAGCTAAAGATGTaGGAATGTTACAGTATGGCA +
Preference number: 3 (lower is better)
Translates to: CGSWSPQFSHPPAILSVWDQLKM*ECYSMA
Trigger: TGCCATACTGTAACATTCCAACATCTTTAGCTGATC...CCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTGGAGACCAACTACCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR CCA 72 bp AGAGTCGGGATCAAAGAATCTTATCTGATACATAGTTaGGGGAGCACGGGAAAAAGCTGGCAAGAGAGGATA +
Preference number: 3 (lower is better)
Translates to: RVGIKESYLIHS*GSTGKSWQERI
Trigger: TATCCTCTCTTGCCAGCTTTTTCCCGTGCTCCCCCAACTATGTATCAGATAAGATTCTTTGATCCCGACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR CAA 90 bp GTGACTCCCTCACCTAACAGTAGACATGAGGCTGAAAACAACTTTACCTGGACATTATGGAGTGGTCATTaGAAGGATGGACTTGCAATG +
Preference number: 3 (lower is better)
Translates to: VTPSPNSRHEAENNFTWTLWSGH*KDGLAM
Trigger: CATTGCAAGTCCATCCTTCAAATGACCACTCCATAA...TGTCCAGGTAAAGTTGTTTTCAGCCTCATGTCTACTGTTAGGTGAGGGAGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
3UTR TCA 72 bp CGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTaGTCAGCTAAAGATGTTGGAATGTTACAGTATGGC +
Preference number: 3 (lower is better)
Translates to: REKAGKRGYGEI*SAKDVGMLQYG
Trigger: GCCATACTGTAACATTCCAACATCTTTAGCTGATCAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR-3UTR CAA 90 bp ACTCTATGTTGTATCAGAACCTCAGCGATGGTTCATGGGCTTCCAGCAGAATATTTATGGAGTGGTCATTaGAAGGATGGACTTGCAATG +
Preference number: 3 (lower is better)
Translates to: TLCCIRTSAMVHGLPAEYLWSGH*KDGLAM
Trigger: CATTGCAAGTCCATCCTTCAAATGACCACTCCATAA...ATATTCTGCTGGAAGCCCATGAACCATCGCTGAGGTTCTGATACAACATAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR TCA 72 bp TTACTGGATGAAATGTTATATTATGGAGTGGTCATTTaGAGGATGGACTTGCAATGGTCCAGGGGAGGAGCA +
Preference number: 3 (lower is better)
Translates to: LLDEMLYYGVVI*RMDLQWSRGGA
Trigger: TGCTCCTCCCCTGGACCATTGCAAGTCCATCCTTCAAATGACCACTCCATAATATAACATTTCATCCAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR TCA 90 bp CCTGGACAGGGCTACCCCTACAGATTGGCCCTTTCTCTCCTACAAAAGGGAGTTGTGAGCTTCCCAGGCTaGACTACCTGGGGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: PGQGYPYRLALSLLQKGVVSFPG*TTWGSP
Trigger: GGGACTGCCCCAGGTAGTTCAGCCTGGGAAGCTCAC...AACTCCCTTTTGTAGGAGAGAAAGGGCCAATCTGTAGGGGTAGCCCTGTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR GCA 90 bp TTTGGACAGAAGGAGCCTCTCTATGTAACAGGCACCCTTCTGCTACTGGTCACAGAGGGTGCACCTTCCTaGTGGCCTGGGGCATCCACA +
Preference number: 4 (lower is better)
Translates to: FGQKEPLYVTGTLLLLVTEGAPS*WPGAST
Trigger: TGTGGATGCCCCAGGCCAGCAGGAAGGTGCACCCTC...TGTGACCAGTAGCAGAAGGGTGCCTGTTACATAGAGAGGCTCCTTCTGTCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR GCA 90 bp CACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTGACTCCCTCACCGACCACAGCCTCAACTaGAGGCGAATTGTCCCCTAC +
Preference number: 4 (lower is better)
Translates to: HNSLTLQQYSLSGCDSLTDHSLN*RRIVPY
Trigger: GTAGGGGACAATTCGCCTGCAGTTGAGGCTGTGGTC...GGTGAGGGAGTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR GCA 90 bp CAGAGCAGAGGCCTGGCATTTTGTTTCCACCTTCCTGTGCTAAGAGAGTCCAGTGGGCGAGCCGAGTCATaGTGGCAGATGGTATGTAGC +
Preference number: 4 (lower is better)
Translates to: QSRGLAFCFHLPVLRESSGRAES*WQMVCS
Trigger: GCTACATACCATCTGCCAGCATGACTCGGCTCGCCC...ACTGGACTCTCTTAGCACAGGAAGGTGGAAACAAAATGCCAGGCCTCTGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
CDS-3UTR GCA 90 bp GTGGATGTCTGGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGCCAGGGGGCAGAGGTTaGAGTGAGCCAAGTTTGCGC +
Preference number: 4 (lower is better)
Translates to: VDVWYQILQRQQFCSSEQPGGRG*SEPSLR
Trigger: GCGCAAACTTGGCTCACTGCAACCTCTGCCCCCTGG...CTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACCAGACATCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp CACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTGACTCCCTCACCCGAGCCGAGTCATGCTaGCAGATGGTATGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: HNSLTLQQYSLSGCDSLTRAESC*QMVCSP
Trigger: TGGGCTACATACCATCTGCCAGCATGACTCGGCTCG...GGTGAGGGAGTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349004.6
ENST00000359675.6
CDS-3UTR CCA 90 bp CAGAGCAGAGGCCTGGCATTTTGTTTCCACCTTCCTGTGCTAAGAGAGTCCAGTCTACTCGAGGTTGAGTaGGTTCGTGATCGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: QSRGLAFCFHLPVLRESSLLEVE*VRDRAS
Trigger: GCTCGCCCGATCACGAACCCACTCAACCTCGAGTAG...ACTGGACTCTCTTAGCACAGGAAGGTGGAAACAAAATGCCAGGCCTCTGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp CATAGTTGGGGGAGCACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGCTACTCGAGGTTGAGTaGGTTCGTGATCGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: HSWGSTGKSWQERIWRDLLLEVE*VRDRAS
Trigger: GCTCGCCCGATCACGAACCCACTCAACCTCGAGTAG...CAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTGCTCCCCCAACTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp TGGACAGGGCTACCCCTACAGATTGGCCCTTTCTCTCCTACAAAAGGGAGTTCACTACTCGAGGTTGAGTaGGTTCGTGATCGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: WTGLPLQIGPFSPTKGSSLLEVE*VRDRAS
Trigger: GCTCGCCCGATCACGAACCCACTCAACCTCGAGTAG...TGAACTCCCTTTTGTAGGAGAGAAAGGGCCAATCTGTAGGGGTAGCCCTGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp CAGAGCAGAGGCCTGGCATTTTGTTTCCACCTTCCTGTGCTAAGAGAGTCCAGTCGAGCCGAGTCATGCTaGCAGATGGTACTGACTCGG +
Preference number: 4 (lower is better)
Translates to: QSRGLAFCFHLPVLRESSRAESC*QMVLTR
Trigger: CCGAGTCAGTACCATCTGCCAGCATGACTCGGCTCG...ACTGGACTCTCTTAGCACAGGAAGGTGGAAACAAAATGCCAGGCCTCTGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373803.6
CDS-3UTR TCA 90 bp CACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGATCAGCTAAAGATGGTGAGCTTCCCAGGCTaGACTACCTGGGGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: HGKKLAREDMERSDQLKMVSFPG*TTWGSP
Trigger: GGGACTGCCCCAGGTAGTTCAGCCTGGGAAGCTCAC...CATCTTTAGCTGATCAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR TCA 90 bp ACAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTAGACTCGGTGCTCAGGTaGCTGAGCTGCACATACGGG +
Preference number: 4 (lower is better)
Translates to: TGTLLLLVTINQWSRRQLDSVLR*LSCTYG
Trigger: CCCGTATGTGCAGCTCAGTCACCTGAGCACCGAGTC...TAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373803.6
CDS-3UTR GCA 90 bp CACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGATCAGCTAAAGATGGAGGGTGCACCTTCCTaGTGGCCTGGGGCATCCACA +
Preference number: 4 (lower is better)
Translates to: HGKKLAREDMERSDQLKMEGAPS*WPGAST
Trigger: TGTGGATGCCCCAGGCCAGCAGGAAGGTGCACCCTC...CATCTTTAGCTGATCAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR GCA 90 bp CATAGTTGGGGGAGCACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGGACCACAGCCTCAACTaGAGGCGAATTGTCCCCTAC +
Preference number: 4 (lower is better)
Translates to: HSWGSTGKSWQERIWRDLDHSLN*RRIVPY
Trigger: GTAGGGGACAATTCGCCTGCAGTTGAGGCTGTGGTC...CAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTGCTCCCCCAACTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR GCA 90 bp TGTGGTAGTTGGTCTCCACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGGGGCGAGCCGAGTCATaGTGGCAGATGGTATGTAGC +
Preference number: 4 (lower is better)
Translates to: CGSWSPQFSHPPAILSVWGRAES*WQMVCS
Trigger: GCTACATACCATCTGCCAGCATGACTCGGCTCGCCC...CCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTGGAGACCAACTACCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349004.6
ENST00000359675.6
CDS-3UTR GCA 90 bp CCTGGACAGGGCTACCCCTACAGATTGGCCCTTTCTCTCCTACAAAAGGGAGTTCCAAGTTTGCGCCATTaGACTCCAGCCTGGGTAACA +
Preference number: 4 (lower is better)
Translates to: PGQGYPYRLALSLLQKGVPSLRH*TPAWVT
Trigger: TGTTACCCAGGCTGGAGTGCAATGGCGCAAACTTGG...AACTCCCTTTTGTAGGAGAGAAAGGGCCAATCTGTAGGGGTAGCCCTGTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR GCA 90 bp ACAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTACCAGGGGGCAGAGGTTaGAGTGAGCCAAGTTTGCGC +
Preference number: 4 (lower is better)
Translates to: TGTLLLLVTINQWSRRQLPGGRG*SEPSLR
Trigger: GCGCAAACTTGGCTCACTGCAACCTCTGCCCCCTGG...TAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR GCA 90 bp TTTGGACAGAAGGAGCCTCTCTATGTAACAGGCACCCTTCTGCTACTGGTCACAGGGCGAGCCGAGTCATaGTGGCAGATGGTACTGACT +
Preference number: 4 (lower is better)
Translates to: FGQKEPLYVTGTLLLLVTGRAES*WQMVLT
Trigger: AGTCAGTACCATCTGCCAGCATGACTCGGCTCGCCC...TGTGACCAGTAGCAGAAGGGTGCCTGTTACATAGAGAGGCTCCTTCTGTCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373803.6
CDS-3UTR CCA 90 bp CAGAGCAGAGGCCTGGCATTTTGTTTCCACCTTCCTGTGCTAAGAGAGTCCAGTCGAGCCGAGTCATGCTaGCAGATGGTATGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: QSRGLAFCFHLPVLRESSRAESC*QMVCSP
Trigger: TGGGCTACATACCATCTGCCAGCATGACTCGGCTCG...ACTGGACTCTCTTAGCACAGGAAGGTGGAAACAAAATGCCAGGCCTCTGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
CDS-3UTR CCA 90 bp TTTGGACAGAAGGAGCCTCTCTATGTAACAGGCACCCTTCTGCTACTGGTCACACTACTCGAGGTTGAGTaGGTTCGTGATCGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: FGQKEPLYVTGTLLLLVTLLEVE*VRDRAS
Trigger: GCTCGCCCGATCACGAACCCACTCAACCTCGAGTAG...TGTGACCAGTAGCAGAAGGGTGCCTGTTACATAGAGAGGCTCCTTCTGTCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp CAGAGCAGAGGCCTGGCATTTTGTTTCCACCTTCCTGTGCTAAGAGAGTCCAGTAGCAGGACACCTCCATaGTCTGGTGTCTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: QSRGLAFCFHLPVLRESSSRTPP*SGVCPG
Trigger: TCCTGGACAGACACCAGACCATGGAGGTGTCCTGCT...ACTGGACTCTCTTAGCACAGGAAGGTGGAAACAAAATGCCAGGCCTCTGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp GGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGAGGCCTGGCAAGGATGGACTTGCAATaGTCCAGGGGAGGAGCATCT +
Preference number: 4 (lower is better)
Translates to: GIRYCSDSSFALQSRGLARMDLQ*SRGGAS
Trigger: AGATGCTCCTCCCCTGGACCATTGCAAGTCCATCCT...TGCCAGGCCTCTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp GGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGAGGCCTGGCATCAGAACCTCAGCGATaGTTCATGGGCTTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GIRYCSDSSFALQSRGLASEPQR*FMGFQQ
Trigger: CTGCTGGAAGCCCATGAACCATCGCTGAGGTTCTGA...TGCCAGGCCTCTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR TCA 90 bp ACTCTATGTTGTATCAGAACCTCAGCGATGGTTCATGGGCTTCCAGCAGAATATGTGAGCTTCCCAGGCTaGACTACCTGGGGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: TLCCIRTSAMVHGLPAEYVSFPG*TTWGSP
Trigger: GGGACTGCCCCAGGTAGTTCAGCCTGGGAAGCTCAC...ATATTCTGCTGGAAGCCCATGAACCATCGCTGAGGTTCTGATACAACATAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR TCA 90 bp CATAGTTGGGGGAGCACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGCCCCTTTCTGGGAACTaGGGAATGGAGACACACTCT +
Preference number: 4 (lower is better)
Translates to: HSWGSTGKSWQERIWRDLPLSGN*GMETHS
Trigger: AGAGTGTGTCTCCATTCCTCAGTTCCCAGAAAGGGG...CAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTGCTCCCCCAACTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR TCA 90 bp CAGAGCAGAGGCCTGGCATTTTGTTTCCACCTTCCTGTGCTAAGAGAGTCCAGTCCCCTTTCTGGGAACTaGGGAATGGAGACACACTCT +
Preference number: 4 (lower is better)
Translates to: QSRGLAFCFHLPVLRESSPLSGN*GMETHS
Trigger: AGAGTGTGTCTCCATTCCTCAGTTCCCAGAAAGGGG...ACTGGACTCTCTTAGCACAGGAAGGTGGAAACAAAATGCCAGGCCTCTGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR GCA 90 bp ACTCTATGTTGTATCAGAACCTCAGCGATGGTTCATGGGCTTCCAGCAGAATATGAGGGTGCACCTTCCTaGTGGCCTGGGGCATCCACA +
Preference number: 4 (lower is better)
Translates to: TLCCIRTSAMVHGLPAEYEGAPS*WPGAST
Trigger: TGTGGATGCCCCAGGCCAGCAGGAAGGTGCACCCTC...ATATTCTGCTGGAAGCCCATGAACCATCGCTGAGGTTCTGATACAACATAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR GCA 90 bp GTGGATGTCTGGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGGACCACAGCCTCAACTaGAGGCGAATTGTCCCCTAC +
Preference number: 4 (lower is better)
Translates to: VDVWYQILQRQQFCSSEQDHSLN*RRIVPY
Trigger: GTAGGGGACAATTCGCCTGCAGTTGAGGCTGTGGTC...CTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACCAGACATCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR GCA 90 bp CATAGTTGGGGGAGCACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGGGTTCAGGCGGGAATTaGATTCGACCACAGCCTCAA +
Preference number: 4 (lower is better)
Translates to: HSWGSTGKSWQERIWRDLGSGGN*IRPQPQ
Trigger: TTGAGGCTGTGGTCGAATGCAATTCCCGCCTGAACC...CAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTGCTCCCCCAACTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR GCA 90 bp GGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGAGGCCTGGCATTTGAAGGATGGACTTaGAATGGTCCAGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: GIRYCSDSSFALQSRGLAFEGWT*NGPGEE
Trigger: CTCCTCCCCTGGACCATTGCAAGTCCATCCTTCAAA...TGCCAGGCCTCTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR GCA 90 bp GTTGGTCTCCACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTGACCAGCGACAGCAGTTTTaGTCTTCAGAGCAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: VGLHNSLTLQQYSLSGCDQRQQF*SSEQRP
Trigger: AGGCCTCTGCTCTGAAGAGCAAAACTGCTGTCGCTG...GTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTGGAGACCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp CCTGGACAGGGCTACCCCTACAGATTGGCCCTTTCTCTCCTACAAAAGGGAGTTGTACTGATACCCTGTTaGGAAAGAGGGTGCACCTTC +
Preference number: 4 (lower is better)
Translates to: PGQGYPYRLALSLLQKGVVLIPC*ERGCTF
Trigger: GAAGGTGCACCCTCTTTCCCAACAGGGTATCAGTAC...AACTCCCTTTTGTAGGAGAGAAAGGGCCAATCTGTAGGGGTAGCCCTGTCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp CACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTGACTCCCTCACCCTTTTCAGGCTTAGGTaGGTAAGAACAGGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: HNSLTLQQYSLSGCDSLTLFRLR*VRTGGS
Trigger: GCTGCCTCCTGTTCTTACCCACCTAAGCCTGAAAAG...GGTGAGGGAGTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp CATAGTTGGGGGAGCACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGTCAGGCCAGAGAGTTTaGAAGCTGCCCAGTCAATCC +
Preference number: 4 (lower is better)
Translates to: HSWGSTGKSWQERIWRDLSGQRV*KLPSQS
Trigger: GGATTGACTGGGCAGCTTCCAAACTCTCTGGCCTGA...CAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTGCTCCCCCAACTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp CAGAGCAGAGGCCTGGCATTTTGTTTCCACCTTCCTGTGCTAAGAGAGTCCAGTTCAGGCCAGAGAGTTTaGAAGCTGCCCAGTCAATCC +
Preference number: 4 (lower is better)
Translates to: QSRGLAFCFHLPVLRESSSGQRV*KLPSQS
Trigger: GGATTGACTGGGCAGCTTCCAAACTCTCTGGCCTGA...ACTGGACTCTCTTAGCACAGGAAGGTGGAAACAAAATGCCAGGCCTCTGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp TTTGGACAGAAGGAGCCTCTCTATGTAACAGGCACCCTTCTGCTACTGGTCACAGGATCAGGTCCAGGTTaGCCTGTAACTCTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: FGQKEPLYVTGTLLLLVTGSGPG*PVTLPA
Trigger: GGCAGGAAGAGTTACAGGCCAACCTGGACCTGATCC...TGTGACCAGTAGCAGAAGGGTGCCTGTTACATAGAGAGGCTCCTTCTGTCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp TTTGGACAGAAGGAGCCTCTCTATGTAACAGGCACCCTTCTGCTACTGGTCACACGAGCCGAGTCATGCTaGCAGATGGTATGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: FGQKEPLYVTGTLLLLVTRAESC*QMVCSP
Trigger: TGGGCTACATACCATCTGCCAGCATGACTCGGCTCG...TGTGACCAGTAGCAGAAGGGTGCCTGTTACATAGAGAGGCTCCTTCTGTCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
CDS-3UTR CCA 90 bp GACATGAGGCTGAAAACAACTTTACCTGGACAGGGCTACCCCTACAGATTGGCCTCAGAACCTCAGCGATaGTTCATGGGCTTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: DMRLKTTLPGQGYPYRLASEPQR*FMGFQQ
Trigger: CTGCTGGAAGCCCATGAACCATCGCTGAGGTTCTGA...GGCCAATCTGTAGGGGTAGCCCTGTCCAGGTAAAGTTGTTTTCAGCCTCATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp CCTGGACAGGGCTACCCCTACAGATTGGCCCTTTCTCTCCTACAAAAGGGAGTTCTGGGAACTGAGGAATaGAGACACACTCTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: PGQGYPYRLALSLLQKGVLGTEE*RHTLCH
Trigger: GTGACAGAGAGTGTGTCTCCATTCCTCAGTTCCCAG...AACTCCCTTTTGTAGGAGAGAAAGGGCCAATCTGTAGGGGTAGCCCTGTCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp GGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGAGGCCTGGCACTGGGAACTGAGGAATaGAGACACACTCTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: GIRYCSDSSFALQSRGLALGTEE*RHTLCH
Trigger: GTGACAGAGAGTGTGTCTCCATTCCTCAGTTCCCAG...TGCCAGGCCTCTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR TCA 90 bp GGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGAGGCCTGGCAGCAGGTTGTCTTGGTTaGTGTCTTGGGCAATATGCA +
Preference number: 4 (lower is better)
Translates to: GIRYCSDSSFALQSRGLAAGCLG*CLGQYA
Trigger: TGCATATTGCCCAAGACATCAACCAAGACAACCTGC...TGCCAGGCCTCTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR GCA 90 bp GACATGAGGCTGAAAACAACTTTACCTGGACAGGGCTACCCCTACAGATTGGCCTTTGAAGGATGGACTTaGAATGGTCCAGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: DMRLKTTLPGQGYPYRLAFEGWT*NGPGEE
Trigger: CTCCTCCCCTGGACCATTGCAAGTCCATCCTTCAAA...GGCCAATCTGTAGGGGTAGCCCTGTCCAGGTAAAGTTGTTTTCAGCCTCATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp TGGACAGGGCTACCCCTACAGATTGGCCCTTTCTCTCCTACAAAAGGGAGTTCACCAGCTCATCCATTGTaGGGTACTGATACCCTGTTG +
Preference number: 4 (lower is better)
Translates to: WTGLPLQIGPFSPTKGSSPAHPL*GTDTLL
Trigger: CAACAGGGTATCAGTACCCCACAATGGATGAGCTGG...TGAACTCCCTTTTGTAGGAGAGAAAGGGCCAATCTGTAGGGGTAGCCCTGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp CACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTGACTCCCTCACCTCCACAAGCTCTGGATaGTTGAGTGCAAATCTGCTG +
Preference number: 4 (lower is better)
Translates to: HNSLTLQQYSLSGCDSLTSTSSG*LSANLL
Trigger: CAGCAGATTTGCACTCAACCATCCAGAGCTTGTGGA...GGTGAGGGAGTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp GGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGAGGCCTGGCAGCCTTCCACAAGCTCTaGATGGTTGAGTGCAAATCT +
Preference number: 4 (lower is better)
Translates to: GIRYCSDSSFALQSRGLAAFHKL*MVECKS
Trigger: AGATTTGCACTCAACCATCCAGAGCTTGTGGAAGGC...TGCCAGGCCTCTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp CACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTGACTCCCTCACCCATTTTGGCCCAGTATaGGTCTTTCGATCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: HNSLTLQQYSLSGCDSLTHFGPV*VFRSPG
Trigger: ACCTGGAGATCGAAAGACCCATACTGGGCCAAAATG...GGTGAGGGAGTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp GACATGAGGCTGAAAACAACTTTACCTGGACAGGGCTACCCCTACAGATTGGCCAGTCATGCTGGCAGATaGTATGTAGCCCATTCCCTG +
Preference number: 4 (lower is better)
Translates to: DMRLKTTLPGQGYPYRLASHAGR*YVAHSL
Trigger: CAGGGAATGGGCTACATACCATCTGCCAGCATGACT...GGCCAATCTGTAGGGGTAGCCCTGTCCAGGTAAAGTTGTTTTCAGCCTCATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349004.6
ENST00000359675.6
CDS-3UTR CCA 90 bp CATAGTTGGGGGAGCACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGAGTCATGCTGGCAGATaGTATGTAGCCCATTCCCTG +
Preference number: 4 (lower is better)
Translates to: HSWGSTGKSWQERIWRDLSHAGR*YVAHSL
Trigger: CAGGGAATGGGCTACATACCATCTGCCAGCATGACT...CAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTGCTCCCCCAACTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
CDS-3UTR CCA 90 bp ACAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTAAGCAGGACACCTCCATaGTCTGGTGTCTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: TGTLLLLVTINQWSRRQLSRTPP*SGVCPG
Trigger: TCCTGGACAGACACCAGACCATGGAGGTGTCCTGCT...TAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp CAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTATAGCAGGACACCTCCATaGTCTGGTGTCTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: QAPFCYWSQSINGPDGNYSRTPP*SGVCPG
Trigger: TCCTGGACAGACACCAGACCATGGAGGTGTCCTGCT...ATAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp GTGGATGTCTGGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGTCAGAACCTCAGCGATaGTTCATGGGCTTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: VDVWYQILQRQQFCSSEQSEPQR*FMGFQQ
Trigger: CTGCTGGAAGCCCATGAACCATCGCTGAGGTTCTGA...CTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACCAGACATCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp CATAGTTGGGGGAGCACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGCTGGGAACTGAGGAATaGAGACACACTCTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: HSWGSTGKSWQERIWRDLLGTEE*RHTLCH
Trigger: GTGACAGAGAGTGTGTCTCCATTCCTCAGTTCCCAG...CAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTGCTCCCCCAACTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp CACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTGACTCCCTCACCGCTACCCCTACAGATTaGCCCTTTCTCTCCTACAAA +
Preference number: 4 (lower is better)
Translates to: HNSLTLQQYSLSGCDSLTATPTD*PFLSYK
Trigger: TTTGTAGGAGAGAAAGGGCCAATCTGTAGGGGTAGC...GGTGAGGGAGTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp GGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGAGGCCTGGCAGCTACCCCTACAGATTaGCCCTTTCTCTCCTACAAA +
Preference number: 4 (lower is better)
Translates to: GIRYCSDSSFALQSRGLAATPTD*PFLSYK
Trigger: TTTGTAGGAGAGAAAGGGCCAATCTGTAGGGGTAGC...TGCCAGGCCTCTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp GGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGAGGCCTGGCAGAAAACAACTTTACCTaGACAGGGCTACCCCTACAG +
Preference number: 4 (lower is better)
Translates to: GIRYCSDSSFALQSRGLAENNFT*TGLPLQ
Trigger: CTGTAGGGGTAGCCCTGTCCAGGTAAAGTTGTTTTC...TGCCAGGCCTCTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR TCA 90 bp GGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGAGGCCTGGCATTCTTGAGTTCCATCTaGCTGATTGCTGGTGACAGA +
Preference number: 4 (lower is better)
Translates to: GIRYCSDSSFALQSRGLAFLSSI*LIAGDR
Trigger: TCTGTCACCAGCAATCAGTCAGATGGAACTCAAGAA...TGCCAGGCCTCTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR TCA 90 bp GGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGAGGCCTGGCATATGGAGTGGTCATTTaGAGGATGGACTTGCAATGG +
Preference number: 4 (lower is better)
Translates to: GIRYCSDSSFALQSRGLAYGVVI*RMDLQW
Trigger: CCATTGCAAGTCCATCCTTCAAATGACCACTCCATA...TGCCAGGCCTCTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR TCA 90 bp ACTCTATGTTGTATCAGAACCTCAGCGATGGTTCATGGGCTTCCAGCAGAATATCGGTGCTCAGGTGACTaGGCTGCACATACGGGATGT +
Preference number: 4 (lower is better)
Translates to: TLCCIRTSAMVHGLPAEYRCSGD*AAHTGC
Trigger: ACATCCCGTATGTGCAGCTCAGTCACCTGAGCACCG...ATATTCTGCTGGAAGCCCATGAACCATCGCTGAGGTTCTGATACAACATAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373803.6
CDS-3UTR TCA 90 bp CAGAGCAGAGGCCTGGCATTTTGTTTCCACCTTCCTGTGCTAAGAGAGTCCAGTTCCATTGTGGGGTACTaGTACCTGACAGTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: QSRGLAFCFHLPVLRESSSIVGY*YLTVKV
Trigger: GACTTTGACTGTCAGGTATCAGTACCCCACAATGGA...ACTGGACTCTCTTAGCACAGGAAGGTGGAAACAAAATGCCAGGCCTCTGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373773.7
CDS-3UTR GCA 90 bp CATAGTTGGGGGAGCACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGAGAGAGTTTGGAAGCTaGCCAGTCAATCCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: HSWGSTGKSWQERIWRDLREFGS*PVNPAF
Trigger: AAAGGCTGGATTGACTGGGCAGCTTCCAAACTCTCT...CAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTGCTCCCCCAACTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR GCA 90 bp CAGAGCAGAGGCCTGGCATTTTGTTTCCACCTTCCTGTGCTAAGAGAGTCCAGTAGAGAGTTTGGAAGCTaGCCAGTCAATCCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: QSRGLAFCFHLPVLRESSREFGS*PVNPAF
Trigger: AAAGGCTGGATTGACTGGGCAGCTTCCAAACTCTCT...ACTGGACTCTCTTAGCACAGGAAGGTGGAAACAAAATGCCAGGCCTCTGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR GCA 90 bp GTGACTCCCTCACCTAACAGTAGACATGAGGCTGAAAACAACTTTACCTGGACAGACCACAGCCTCAACTaGAGGCGAATTGTCCCCTAC +
Preference number: 4 (lower is better)
Translates to: VTPSPNSRHEAENNFTWTDHSLN*RRIVPY
Trigger: GTAGGGGACAATTCGCCTGCAGTTGAGGCTGTGGTC...TGTCCAGGTAAAGTTGTTTTCAGCCTCATGTCTACTGTTAGGTGAGGGAGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR GCA 90 bp ACAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTACAGCGACAGCAGTTTTaGTCTTCAGAGCAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: TGTLLLLVTINQWSRRQLQRQQF*SSEQRP
Trigger: AGGCCTCTGCTCTGAAGAGCAAAACTGCTGTCGCTG...TAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR GCA 90 bp CGCACACACAGAGTCGGGATCAAAGAATCTTATCTGATACATAGTTGGGGGAGCCAGCGACAGCAGTTTTaGTCTTCAGAGCAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: RTHRVGIKESYLIHSWGSQRQQF*SSEQRP
Trigger: AGGCCTCTGCTCTGAAGAGCAAAACTGCTGTCGCTG...GCTCCCCCAACTATGTATCAGATAAGATTCTTTGATCCCGACTCTGTGTGTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR GCA 90 bp CACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTGACTCCCTCACCTCTCCCCCATCTACATaGTTTTTAGGCCAAACCTCT +
Preference number: 4 (lower is better)
Translates to: HNSLTLQQYSLSGCDSLTSPPST*FLGQTS
Trigger: AGAGGTTTGGCCTAAAAAGCATGTAGATGGGGGAGA...GGTGAGGGAGTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR GCA 90 bp CAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTATCCAAGTTTGCGCCATTaGACTCCAGCCTGGGTAACA +
Preference number: 4 (lower is better)
Translates to: QAPFCYWSQSINGPDGNYPSLRH*TPAWVT
Trigger: TGTTACCCAGGCTGGAGTGCAATGGCGCAAACTTGG...ATAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp GTTGGTCTCCACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTGACCAGACAGCAAAGTGCTaGGTGATCTCTTGCATATCC +
Preference number: 4 (lower is better)
Translates to: VGLHNSLTLQQYSLSGCDQTAKC*VISCIS
Trigger: GGATATGCAAGAGATCACCCAGCACTTTGCTGTCTG...GTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTGGAGACCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp GTGGATGTCTGGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGGTACTGATACCCTGTTaGGAAAGAGGGTGCACCTTC +
Preference number: 4 (lower is better)
Translates to: VDVWYQILQRQQFCSSEQVLIPC*ERGCTF
Trigger: GAAGGTGCACCCTCTTTCCCAACAGGGTATCAGTAC...CTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACCAGACATCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp GTTGGTCTCCACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTGACGCCTTCCACAAGCTCTaGATGGTTGAGTGCAAATCT +
Preference number: 4 (lower is better)
Translates to: VGLHNSLTLQQYSLSGCDAFHKL*MVECKS
Trigger: AGATTTGCACTCAACCATCCAGAGCTTGTGGAAGGC...GTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTGGAGACCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp GACATGAGGCTGAAAACAACTTTACCTGGACAGGGCTACCCCTACAGATTGGCCCATTTTGGCCCAGTATaGGTCTTTCGATCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: DMRLKTTLPGQGYPYRLAHFGPV*VFRSPG
Trigger: ACCTGGAGATCGAAAGACCCATACTGGGCCAAAATG...GGCCAATCTGTAGGGGTAGCCCTGTCCAGGTAAAGTTGTTTTCAGCCTCATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp CACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGATCAGCTAAAGATGAGCAGGACACCTCCATaGTCTGGTGTCTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: HGKKLAREDMERSDQLKMSRTPP*SGVCPG
Trigger: TCCTGGACAGACACCAGACCATGGAGGTGTCCTGCT...CATCTTTAGCTGATCAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp CAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTATAGGATGGACTTGCAATaGTCCAGGGGAGGAGCATCT +
Preference number: 4 (lower is better)
Translates to: QAPFCYWSQSINGPDGNYRMDLQ*SRGGAS
Trigger: AGATGCTCCTCCCCTGGACCATTGCAAGTCCATCCT...ATAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp GACATGAGGCTGAAAACAACTTTACCTGGACAGGGCTACCCCTACAGATTGGCCTGGTCATTTGAAGGATaGACTTGCAATGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: DMRLKTTLPGQGYPYRLAWSFEG*TCNGPG
Trigger: CCCTGGACCATTGCAAGTCCATCCTTCAAATGACCA...GGCCAATCTGTAGGGGTAGCCCTGTCCAGGTAAAGTTGTTTTCAGCCTCATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp ACAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTATCAGAACCTCAGCGATaGTTCATGGGCTTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: TGTLLLLVTINQWSRRQLSEPQR*FMGFQQ
Trigger: CTGCTGGAAGCCCATGAACCATCGCTGAGGTTCTGA...TAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp CCTGGACAGGGCTACCCCTACAGATTGGCCCTTTCTCTCCTACAAAAGGGAGTTGGATATGTGGATGTCTaGTATCAGATACTGCAGCGA +
Preference number: 4 (lower is better)
Translates to: PGQGYPYRLALSLLQKGVGYVDV*YQILQR
Trigger: TCGCTGCAGTATCTGATACCAGACATCCACATATCC...AACTCCCTTTTGTAGGAGAGAAAGGGCCAATCTGTAGGGGTAGCCCTGTCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp GTGGATGTCTGGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGAACCTCTCCCCTTTCTaGGAACTGAGGAATGGAGAC +
Preference number: 4 (lower is better)
Translates to: VDVWYQILQRQQFCSSEQNLSPF*ELRNGD
Trigger: GTCTCCATTCCTCAGTTCCCAGAAAGGGGAGAGGTT...CTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACCAGACATCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp TGGACAGGGCTACCCCTACAGATTGGCCCTTTCTCTCCTACAAAAGGGAGTTCAGCTACCCCTACAGATTaGCCCTTTCTCTCCTACAAA +
Preference number: 4 (lower is better)
Translates to: WTGLPLQIGPFSPTKGSSATPTD*PFLSYK
Trigger: TTTGTAGGAGAGAAAGGGCCAATCTGTAGGGGTAGC...TGAACTCCCTTTTGTAGGAGAGAAAGGGCCAATCTGTAGGGGTAGCCCTGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp CATAGTTGGGGGAGCACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGGAAAACAACTTTACCTaGACAGGGCTACCCCTACAG +
Preference number: 4 (lower is better)
Translates to: HSWGSTGKSWQERIWRDLENNFT*TGLPLQ
Trigger: CTGTAGGGGTAGCCCTGTCCAGGTAAAGTTGTTTTC...CAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTGCTCCCCCAACTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp TGTGGTAGTTGGTCTCCACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCCCCTTCCCAAGATTTaGAACTGTGTAACCCTGAGC +
Preference number: 4 (lower is better)
Translates to: CGSWSPQFSHPPAILSVWPLPKI*NCVTLS
Trigger: GCTCAGGGTTACACAGTTCCAAATCTTGGGAAGGGG...CCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTGGAGACCAACTACCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR TCA 90 bp GACATGAGGCTGAAAACAACTTTACCTGGACAGGGCTACCCCTACAGATTGGCCCCTGAAGTTCATCCATaGGGTCAGATAACGAGAGTA +
Preference number: 4 (lower is better)
Translates to: DMRLKTTLPGQGYPYRLAPEVHP*GQITRV
Trigger: TACTCTCGTTATCTGACCTCATGGATGAACTTCAGG...GGCCAATCTGTAGGGGTAGCCCTGTCCAGGTAAAGTTGTTTTCAGCCTCATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR TCA 90 bp GTTGGTCTCCACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTGACTTCTTGAGTTCCATCTaGCTGATTGCTGGTGACAGA +
Preference number: 4 (lower is better)
Translates to: VGLHNSLTLQQYSLSGCDFLSSI*LIAGDR
Trigger: TCTGTCACCAGCAATCAGTCAGATGGAACTCAAGAA...GTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTGGAGACCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR TCA 90 bp TGGACAGGGCTACCCCTACAGATTGGCCCTTTCTCTCCTACAAAAGGGAGTTCATATGGAGTGGTCATTTaGAGGATGGACTTGCAATGG +
Preference number: 4 (lower is better)
Translates to: WTGLPLQIGPFSPTKGSSYGVVI*RMDLQW
Trigger: CCATTGCAAGTCCATCCTTCAAATGACCACTCCATA...TGAACTCCCTTTTGTAGGAGAGAAAGGGCCAATCTGTAGGGGTAGCCCTGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR TCA 90 bp GACATGAGGCTGAAAACAACTTTACCTGGACAGGGCTACCCCTACAGATTGGCCTTCAGTGGCCATGCATaGGTTAAAGATAGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: DMRLKTTLPGQGYPYRLAFSGHA*VKDSRG
Trigger: GCCTCTACTATCTTTAACTCATGCATGGCCACTGAA...GGCCAATCTGTAGGGGTAGCCCTGTCCAGGTAAAGTTGTTTTCAGCCTCATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR TCA 90 bp GGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGAGGCCTGGCAGGATATGGAGAGATCTaGTCAGCTAAAGATGTTGGA +
Preference number: 4 (lower is better)
Translates to: GIRYCSDSSFALQSRGLAGYGEI*SAKDVG
Trigger: TCCAACATCTTTAGCTGATCAGATCTCTCCATATCC...TGCCAGGCCTCTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR TCA 90 bp ACAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTATGGGGTACTGATACCTaGCAGTCAAAGTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: TGTLLLLVTINQWSRRQLWGTDT*QSKSWK
Trigger: CTTCCAGGACTTTGACTGTCAGGTATCAGTACCCCA...TAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373773.7
CDS-3UTR GCA 90 bp CAGAGCAGAGGCCTGGCATTTTGTTTCCACCTTCCTGTGCTAAGAGAGTCCAGTCTCTGGATGGTTGAGTaGAAATCTGCTGAGGATGTA +
Preference number: 4 (lower is better)
Translates to: QSRGLAFCFHLPVLRESSLWMVE*KSAEDV
Trigger: TACATCCTCAGCAGATTTGCACTCAACCATCCAGAG...ACTGGACTCTCTTAGCACAGGAAGGTGGAAACAAAATGCCAGGCCTCTGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR GCA 90 bp CATAGTTGGGGGAGCACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGCTCTGGATGGTTGAGTaGAAATCTGCTGAGGATGTA +
Preference number: 4 (lower is better)
Translates to: HSWGSTGKSWQERIWRDLLWMVE*KSAEDV
Trigger: TACATCCTCAGCAGATTTGCACTCAACCATCCAGAG...CAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTGCTCCCCCAACTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR GCA 90 bp CACTTCTTGTGGATATGTGGATGTCTGGTATCAGATACTGCAGCGACAGCAGTTGGTTCAGGCGGGAATTaGATTCGACCACAGCCTCAA +
Preference number: 4 (lower is better)
Translates to: HFLWICGCLVSDTAATAVGSGGN*IRPQPQ
Trigger: TTGAGGCTGTGGTCGAATGCAATTCCCGCCTGAACC...AACTGCTGTCGCTGCAGTATCTGATACCAGACATCCACATATCCACAAGAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR GCA 90 bp CGCACACACAGAGTCGGGATCAAAGAATCTTATCTGATACATAGTTGGGGGAGCTTTGAAGGATGGACTTaGAATGGTCCAGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: RTHRVGIKESYLIHSWGSFEGWT*NGPGEE
Trigger: CTCCTCCCCTGGACCATTGCAAGTCCATCCTTCAAA...GCTCCCCCAACTATGTATCAGATAAGATTCTTTGATCCCGACTCTGTGTGTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR GCA 90 bp GTTGGTCTCCACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTGACGCAAACAAAAGAGAATaGAGTGGCCTACCCAACCTA +
Preference number: 4 (lower is better)
Translates to: VGLHNSLTLQQYSLSGCDANKRE*SGLPNL
Trigger: TAGGTTGGGTAGGCCACTGCATTCTCTTTTGTTTGC...GTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTGGAGACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR GCA 90 bp GGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGAGGCCTGGCACACATTCCTCAAAGCTaGTCTCTCCTGAAATCACTT +
Preference number: 4 (lower is better)
Translates to: GIRYCSDSSFALQSRGLAHIPQS*SLLKSL
Trigger: AAGTGATTTCAGGAGAGAGCAGCTTTGAGGAATGTG...TGCCAGGCCTCTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR GCA 90 bp CACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGATCAGCTAAAGATGCAGCGACAGCAGTTTTaGTCTTCAGAGCAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: HGKKLAREDMERSDQLKMQRQQF*SSEQRP
Trigger: AGGCCTCTGCTCTGAAGAGCAAAACTGCTGTCGCTG...CATCTTTAGCTGATCAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR GCA 90 bp GTTGGTCTCCACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTGACTCTGGTATCAGATACTaGAGCGACAGCAGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: VGLHNSLTLQQYSLSGCDSGIRY*SDSSFA
Trigger: AGCAAAACTGCTGTCGCTGCAGTATCTGATACCAGA...GTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTGGAGACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR GCA 90 bp TGGACAGGGCTACCCCTACAGATTGGCCCTTTCTCTCCTACAAAAGGGAGTTCATCTCCCCCATCTACATaGTTTTTAGGCCAAACCTCT +
Preference number: 4 (lower is better)
Translates to: WTGLPLQIGPFSPTKGSSSPPST*FLGQTS
Trigger: AGAGGTTTGGCCTAAAAAGCATGTAGATGGGGGAGA...TGAACTCCCTTTTGTAGGAGAGAAAGGGCCAATCTGTAGGGGTAGCCCTGTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR GCA 90 bp GTGACTCCCTCACCTAACAGTAGACATGAGGCTGAAAACAACTTTACCTGGACACCAAGTTTGCGCCATTaGACTCCAGCCTGGGTAACA +
Preference number: 4 (lower is better)
Translates to: VTPSPNSRHEAENNFTWTPSLRH*TPAWVT
Trigger: TGTTACCCAGGCTGGAGTGCAATGGCGCAAACTTGG...TGTCCAGGTAAAGTTGTTTTCAGCCTCATGTCTACTGTTAGGTGAGGGAGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR GCA 90 bp CAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTATCAAGAGCTGGGCTCTTaGTATGTGGTAGTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: QAPFCYWSQSINGPDGNYQELGS*YVVVGL
Trigger: GAGACCAACTACCACATAGCAAGAGCCCAGCTCTTG...ATAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp GTGGATGTCTGGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGCAGACAGCAAAGTGCTaGGTGATCTCTTGCATATCC +
Preference number: 4 (lower is better)
Translates to: VDVWYQILQRQQFCSSEQQTAKC*VISCIS
Trigger: GGATATGCAAGAGATCACCCAGCACTTTGCTGTCTG...CTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACCAGACATCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp TTTGGACAGAAGGAGCCTCTCTATGTAACAGGCACCCTTCTGCTACTGGTCACACAGACAGCAAAGTGCTaGGTGATCTCTTGCATATCC +
Preference number: 4 (lower is better)
Translates to: FGQKEPLYVTGTLLLLVTQTAKC*VISCIS
Trigger: GGATATGCAAGAGATCACCCAGCACTTTGCTGTCTG...TGTGACCAGTAGCAGAAGGGTGCCTGTTACATAGAGAGGCTCCTTCTGTCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp ACAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTACTTTTCAGGCTTAGGTaGGTAAGAACAGGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: TGTLLLLVTINQWSRRQLLFRLR*VRTGGS
Trigger: GCTGCCTCCTGTTCTTACCCACCTAAGCCTGAAAAG...TAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp TTTGGACAGAAGGAGCCTCTCTATGTAACAGGCACCCTTCTGCTACTGGTCACATCCACAAGCTCTGGATaGTTGAGTGCAAATCTGCTG +
Preference number: 4 (lower is better)
Translates to: FGQKEPLYVTGTLLLLVTSTSSG*LSANLL
Trigger: CAGCAGATTTGCACTCAACCATCCAGAGCTTGTGGA...TGTGACCAGTAGCAGAAGGGTGCCTGTTACATAGAGAGGCTCCTTCTGTCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp GTGGATGTCTGGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGTCCACAAGCTCTGGATaGTTGAGTGCAAATCTGCTG +
Preference number: 4 (lower is better)
Translates to: VDVWYQILQRQQFCSSEQSTSSG*LSANLL
Trigger: CAGCAGATTTGCACTCAACCATCCAGAGCTTGTGGA...CTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACCAGACATCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp GTGGATGTCTGGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGGCCTTCCACAAGCTCTaGATGGTTGAGTGCAAATCT +
Preference number: 4 (lower is better)
Translates to: VDVWYQILQRQQFCSSEQAFHKL*MVECKS
Trigger: AGATTTGCACTCAACCATCCAGAGCTTGTGGAAGGC...CTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACCAGACATCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp GTGACTCCCTCACCTAACAGTAGACATGAGGCTGAAAACAACTTTACCTGGACATCAGGCCAGAGAGTTTaGAAGCTGCCCAGTCAATCC +
Preference number: 4 (lower is better)
Translates to: VTPSPNSRHEAENNFTWTSGQRV*KLPSQS
Trigger: GGATTGACTGGGCAGCTTCCAAACTCTCTGGCCTGA...TGTCCAGGTAAAGTTGTTTTCAGCCTCATGTCTACTGTTAGGTGAGGGAGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp ACTCTATGTTGTATCAGAACCTCAGCGATGGTTCATGGGCTTCCAGCAGAATATGGATCAGGTCCAGGTTaGCCTGTAACTCTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: TLCCIRTSAMVHGLPAEYGSGPG*PVTLPA
Trigger: GGCAGGAAGAGTTACAGGCCAACCTGGACCTGATCC...ATATTCTGCTGGAAGCCCATGAACCATCGCTGAGGTTCTGATACAACATAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp CGCACACACAGAGTCGGGATCAAAGAATCTTATCTGATACATAGTTGGGGGAGCAGTCATGCTGGCAGATaGTATGTAGCCCATTCCCTG +
Preference number: 4 (lower is better)
Translates to: RTHRVGIKESYLIHSWGSSHAGR*YVAHSL
Trigger: CAGGGAATGGGCTACATACCATCTGCCAGCATGACT...GCTCCCCCAACTATGTATCAGATAAGATTCTTTGATCCCGACTCTGTGTGTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
CDS-3UTR CCA 90 bp GACATGAGGCTGAAAACAACTTTACCTGGACAGGGCTACCCCTACAGATTGGCCTATCTGATACATAGTTaGGGGAGCACGGGAAAAAGC +
Preference number: 4 (lower is better)
Translates to: DMRLKTTLPGQGYPYRLAYLIHS*GSTGKS
Trigger: GCTTTTTCCCGTGCTCCCCCAACTATGTATCAGATA...GGCCAATCTGTAGGGGTAGCCCTGTCCAGGTAAAGTTGTTTTCAGCCTCATGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp CAGAGCAGAGGCCTGGCATTTTGTTTCCACCTTCCTGTGCTAAGAGAGTCCAGTTATCTGATACATAGTTaGGGGAGCACGGGAAAAAGC +
Preference number: 4 (lower is better)
Translates to: QSRGLAFCFHLPVLRESSYLIHS*GSTGKS
Trigger: GCTTTTTCCCGTGCTCCCCCAACTATGTATCAGATA...ACTGGACTCTCTTAGCACAGGAAGGTGGAAACAAAATGCCAGGCCTCTGCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp GACATGAGGCTGAAAACAACTTTACCTGGACAGGGCTACCCCTACAGATTGGCCGGATATGTGGATGTCTaGTATCAGATACTGCAGCGA +
Preference number: 4 (lower is better)
Translates to: DMRLKTTLPGQGYPYRLAGYVDV*YQILQR
Trigger: TCGCTGCAGTATCTGATACCAGACATCCACATATCC...GGCCAATCTGTAGGGGTAGCCCTGTCCAGGTAAAGTTGTTTTCAGCCTCATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp TTTGGACAGAAGGAGCCTCTCTATGTAACAGGCACCCTTCTGCTACTGGTCACAGAAAACAACTTTACCTaGACAGGGCTACCCCTACAG +
Preference number: 4 (lower is better)
Translates to: FGQKEPLYVTGTLLLLVTENNFT*TGLPLQ
Trigger: CTGTAGGGGTAGCCCTGTCCAGGTAAAGTTGTTTTC...TGTGACCAGTAGCAGAAGGGTGCCTGTTACATAGAGAGGCTCCTTCTGTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR TCA 90 bp GTGGATGTCTGGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGCCTGAAGTTCATCCATaGGGTCAGATAACGAGAGTA +
Preference number: 4 (lower is better)
Translates to: VDVWYQILQRQQFCSSEQPEVHP*GQITRV
Trigger: TACTCTCGTTATCTGACCTCATGGATGAACTTCAGG...CTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACCAGACATCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR TCA 90 bp CAGAGCAGAGGCCTGGCATTTTGTTTCCACCTTCCTGTGCTAAGAGAGTCCAGTACGTGGACCACACCATaGGTTGTTTCTATATCATGT +
Preference number: 4 (lower is better)
Translates to: QSRGLAFCFHLPVLRESSTWTTP*VVSISC
Trigger: ACATGATATAGAAACAACTCATGGTGTGGTCCACGT...ACTGGACTCTCTTAGCACAGGAAGGTGGAAACAAAATGCCAGGCCTCTGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR TCA 90 bp CCTGGACAGGGCTACCCCTACAGATTGGCCCTTTCTCTCCTACAAAAGGGAGTTAACAGGATTTATGGTTaGGGCCAATGTCATGATATG +
Preference number: 4 (lower is better)
Translates to: PGQGYPYRLALSLLQKGVNRIYG*GQCHDM
Trigger: CATATCATGACATTGGCCTCAACCATAAATCCTGTT...AACTCCCTTTTGTAGGAGAGAAAGGGCCAATCTGTAGGGGTAGCCCTGTCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR TCA 90 bp CACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTGACTCCCTCACCAACAGGATTTATGGTTaGGGCCAATGTCATGATATG +
Preference number: 4 (lower is better)
Translates to: HNSLTLQQYSLSGCDSLTNRIYG*GQCHDM
Trigger: CATATCATGACATTGGCCTCAACCATAAATCCTGTT...GGTGAGGGAGTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR TCA 90 bp CAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTATGCAGGTTGTCTTGGTTaGTGTCTTGGGCAATATGCA +
Preference number: 4 (lower is better)
Translates to: QAPFCYWSQSINGPDGNYAGCLG*CLGQYA
Trigger: TGCATATTGCCCAAGACATCAACCAAGACAACCTGC...ATAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR TCA 90 bp AAGCTGCTCTCTCCTGAAATCACTTTGCAAATTTTGTTGACCAATTTGCAAACAGTGAGCTTCCCAGGCTaGACTACCTGGGGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: KLLSPEITLQILLTNLQTVSFPG*TTWGSP
Trigger: GGGACTGCCCCAGGTAGTTCAGCCTGGGAAGCTCAC...TGTTTGCAAATTGGTCAACAAAATTTGCAAAGTGATTTCAGGAGAGAGCAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR TCA 90 bp TGTGGTAGTTGGTCTCCACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGTTCTTGAGTTCCATCTaGCTGATTGCTGGTGACAGA +
Preference number: 4 (lower is better)
Translates to: CGSWSPQFSHPPAILSVWFLSSI*LIAGDR
Trigger: TCTGTCACCAGCAATCAGTCAGATGGAACTCAAGAA...CCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTGGAGACCAACTACCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR TCA 90 bp CACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTGACTCCCTCACCTCAAAGAATCTTATCTaGTACATAGTTGGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: HNSLTLQQYSLSGCDSLTSKNLI*YIVGGA
Trigger: TGCTCCCCCAACTATGTATCAGATAAGATTCTTTGA...GGTGAGGGAGTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR GCA 90 bp CACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTGACTCCCTCACCTGCTGGGTGATCTCTTaGATATCCTCAAAGTTAAAG +
Preference number: 4 (lower is better)
Translates to: HNSLTLQQYSLSGCDSLTCWVIS*ISSKLK
Trigger: CTTTAACTTTGAGGATATGCAAGAGATCACCCAGCA...GGTGAGGGAGTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR GCA 90 bp CATAGTTGGGGGAGCACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGGAATTCAAGAAGAGCTaGAGGTTGTCTTGGTTGATG +
Preference number: 4 (lower is better)
Translates to: HSWGSTGKSWQERIWRDLEFKKS*RLSWLM
Trigger: CATCAACCAAGACAACCTGCAGCTCTTCTTGAATTC...CAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTGCTCCCCCAACTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR GCA 90 bp TGGACAGGGCTACCCCTACAGATTGGCCCTTTCTCTCCTACAAAAGGGAGTTCACACATTCCTCAAAGCTaGTCTCTCCTGAAATCACTT +
Preference number: 4 (lower is better)
Translates to: WTGLPLQIGPFSPTKGSSHIPQS*SLLKSL
Trigger: AAGTGATTTCAGGAGAGAGCAGCTTTGAGGAATGTG...TGAACTCCCTTTTGTAGGAGAGAAAGGGCCAATCTGTAGGGGTAGCCCTGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp ACTCTATGTTGTATCAGAACCTCAGCGATGGTTCATGGGCTTCCAGCAGAATATTCAGGCCAGAGAGTTTaGAAGCTGCCCAGTCAATCC +
Preference number: 4 (lower is better)
Translates to: TLCCIRTSAMVHGLPAEYSGQRV*KLPSQS
Trigger: GGATTGACTGGGCAGCTTCCAAACTCTCTGGCCTGA...ATATTCTGCTGGAAGCCCATGAACCATCGCTGAGGTTCTGATACAACATAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp TTTGGACAGAAGGAGCCTCTCTATGTAACAGGCACCCTTCTGCTACTGGTCACAAGCTGCAGGTTGTCTTaGTTGATGTCTTGGGCAATA +
Preference number: 4 (lower is better)
Translates to: FGQKEPLYVTGTLLLLVTSCRLS*LMSWAI
Trigger: TATTGCCCAAGACATCAACCAAGACAACCTGCAGCT...TGTGACCAGTAGCAGAAGGGTGCCTGTTACATAGAGAGGCTCCTTCTGTCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp TGTGGTAGTTGGTCTCCACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGAGCTGCAGGTTGTCTTaGTTGATGTCTTGGGCAATA +
Preference number: 4 (lower is better)
Translates to: CGSWSPQFSHPPAILSVWSCRLS*LMSWAI
Trigger: TATTGCCCAAGACATCAACCAAGACAACCTGCAGCT...CCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTGGAGACCAACTACCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp CAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTATCATTTTGGCCCAGTATaGGTCTTTCGATCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: QAPFCYWSQSINGPDGNYHFGPV*VFRSPG
Trigger: ACCTGGAGATCGAAAGACCCATACTGGGCCAAAATG...ATAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp CAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTATTGGTCATTTGAAGGATaGACTTGCAATGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: QAPFCYWSQSINGPDGNYWSFEG*TCNGPG
Trigger: CCCTGGACCATTGCAAGTCCATCCTTCAAATGACCA...ATAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp GACATGAGGCTGAAAACAACTTTACCTGGACAGGGCTACCCCTACAGATTGGCCTGTTACAGTATGGCATaGAAGTGGTTCTTGGGCTAT +
Preference number: 4 (lower is better)
Translates to: DMRLKTTLPGQGYPYRLACYSMA*KWFLGY
Trigger: ATAGCCCAAGAACCACTTCCATGCCATACTGTAACA...GGCCAATCTGTAGGGGTAGCCCTGTCCAGGTAAAGTTGTTTTCAGCCTCATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp TTTGGACAGAAGGAGCCTCTCTATGTAACAGGCACCCTTCTGCTACTGGTCACAGCACCCTTCTGCTACTaGTCACAATCAATCAATGGT +
Preference number: 4 (lower is better)
Translates to: FGQKEPLYVTGTLLLLVTAPFCY*SQSING
Trigger: ACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGC...TGTGACCAGTAGCAGAAGGGTGCCTGTTACATAGAGAGGCTCCTTCTGTCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp GTGGATGTCTGGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGGGATATGTGGATGTCTaGTATCAGATACTGCAGCGA +
Preference number: 4 (lower is better)
Translates to: VDVWYQILQRQQFCSSEQGYVDV*YQILQR
Trigger: TCGCTGCAGTATCTGATACCAGACATCCACATATCC...CTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACCAGACATCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp CACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGATCAGCTAAAGATGCTGGGAACTGAGGAATaGAGACACACTCTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: HGKKLAREDMERSDQLKMLGTEE*RHTLCH
Trigger: GTGACAGAGAGTGTGTCTCCATTCCTCAGTTCCCAG...CATCTTTAGCTGATCAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp CACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGATCAGCTAAAGATGAACCTCTCCCCTTTCTaGGAACTGAGGAATGGAGAC +
Preference number: 4 (lower is better)
Translates to: HGKKLAREDMERSDQLKMNLSPF*ELRNGD
Trigger: GTCTCCATTCCTCAGTTCCCAGAAAGGGGAGAGGTT...CATCTTTAGCTGATCAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp CACTTCTTGTGGATATGTGGATGTCTGGTATCAGATACTGCAGCGACAGCAGTTAACCTCTCCCCTTTCTaGGAACTGAGGAATGGAGAC +
Preference number: 4 (lower is better)
Translates to: HFLWICGCLVSDTAATAVNLSPF*ELRNGD
Trigger: GTCTCCATTCCTCAGTTCCCAGAAAGGGGAGAGGTT...AACTGCTGTCGCTGCAGTATCTGATACCAGACATCCACATATCCACAAGAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp GACATGAGGCTGAAAACAACTTTACCTGGACAGGGCTACCCCTACAGATTGGCCTTGCTATGTGGTAGTTaGTCTCCACAATTCTCTCAC +
Preference number: 4 (lower is better)
Translates to: DMRLKTTLPGQGYPYRLALLCGS*SPQFSH
Trigger: GTGAGAGAATTGTGGAGACCAACTACCACATAGCAA...GGCCAATCTGTAGGGGTAGCCCTGTCCAGGTAAAGTTGTTTTCAGCCTCATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp TGGACAGGGCTACCCCTACAGATTGGCCCTTTCTCTCCTACAAAAGGGAGTTCATTGCTATGTGGTAGTTaGTCTCCACAATTCTCTCAC +
Preference number: 4 (lower is better)
Translates to: WTGLPLQIGPFSPTKGSSLLCGS*SPQFSH
Trigger: GTGAGAGAATTGTGGAGACCAACTACCACATAGCAA...TGAACTCCCTTTTGTAGGAGAGAAAGGGCCAATCTGTAGGGGTAGCCCTGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR TCA 90 bp ACAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTACCTGAAGTTCATCCATaGGGTCAGATAACGAGAGTA +
Preference number: 4 (lower is better)
Translates to: TGTLLLLVTINQWSRRQLPEVHP*GQITRV
Trigger: TACTCTCGTTATCTGACCTCATGGATGAACTTCAGG...TAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR TCA 90 bp CGCACACACAGAGTCGGGATCAAAGAATCTTATCTGATACATAGTTGGGGGAGCTTCTTGAGTTCCATCTaGCTGATTGCTGGTGACAGA +
Preference number: 4 (lower is better)
Translates to: RTHRVGIKESYLIHSWGSFLSSI*LIAGDR
Trigger: TCTGTCACCAGCAATCAGTCAGATGGAACTCAAGAA...GCTCCCCCAACTATGTATCAGATAAGATTCTTTGATCCCGACTCTGTGTGTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR TCA 90 bp TGTGGTAGTTGGTCTCCACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGGGATATGGAGAGATCTaGTCAGCTAAAGATGTTGGA +
Preference number: 4 (lower is better)
Translates to: CGSWSPQFSHPPAILSVWGYGEI*SAKDVG
Trigger: TCCAACATCTTTAGCTGATCAGATCTCTCCATATCC...CCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTGGAGACCAACTACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR TCA 90 bp CATAGTTGGGGGAGCACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGTCCAGACGGCAATTATaGTTTTCCACATTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: HSWGSTGKSWQERIWRDLSRRQL*FSTFLK
Trigger: TTTGAGGAATGTGGAAAATCATAATTGCCGTCTGGA...CAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTGCTCCCCCAACTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR GCA 90 bp CATAGTTGGGGGAGCACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGTGCTGGGTGATCTCTTaGATATCCTCAAAGTTAAAG +
Preference number: 4 (lower is better)
Translates to: HSWGSTGKSWQERIWRDLCWVIS*ISSKLK
Trigger: CTTTAACTTTGAGGATATGCAAGAGATCACCCAGCA...CAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTGCTCCCCCAACTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR GCA 90 bp ACAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTACTCTGGATGGTTGAGTaGAAATCTGCTGAGGATGTA +
Preference number: 4 (lower is better)
Translates to: TGTLLLLVTINQWSRRQLLWMVE*KSAEDV
Trigger: TACATCCTCAGCAGATTTGCACTCAACCATCCAGAG...TAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR GCA 90 bp TTTGGACAGAAGGAGCCTCTCTATGTAACAGGCACCCTTCTGCTACTGGTCACAGAATTCAAGAAGAGCTaGAGGTTGTCTTGGTTGATG +
Preference number: 4 (lower is better)
Translates to: FGQKEPLYVTGTLLLLVTEFKKS*RLSWLM
Trigger: CATCAACCAAGACAACCTGCAGCTCTTCTTGAATTC...TGTGACCAGTAGCAGAAGGGTGCCTGTTACATAGAGAGGCTCCTTCTGTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR GCA 90 bp ACTCTATGTTGTATCAGAACCTCAGCGATGGTTCATGGGCTTCCAGCAGAATATTTTGAAGGATGGACTTaGAATGGTCCAGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: TLCCIRTSAMVHGLPAEYFEGWT*NGPGEE
Trigger: CTCCTCCCCTGGACCATTGCAAGTCCATCCTTCAAA...ATATTCTGCTGGAAGCCCATGAACCATCGCTGAGGTTCTGATACAACATAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR GCA 90 bp TGTGGTAGTTGGTCTCCACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCACATTCCTCAAAGCTaGTCTCTCCTGAAATCACTT +
Preference number: 4 (lower is better)
Translates to: CGSWSPQFSHPPAILSVWHIPQS*SLLKSL
Trigger: AAGTGATTTCAGGAGAGAGCAGCTTTGAGGAATGTG...CCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTGGAGACCAACTACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR GCA 90 bp TTTGGACAGAAGGAGCCTCTCTATGTAACAGGCACCCTTCTGCTACTGGTCACACACATTCCTCAAAGCTaGTCTCTCCTGAAATCACTT +
Preference number: 4 (lower is better)
Translates to: FGQKEPLYVTGTLLLLVTHIPQS*SLLKSL
Trigger: AAGTGATTTCAGGAGAGAGCAGCTTTGAGGAATGTG...TGTGACCAGTAGCAGAAGGGTGCCTGTTACATAGAGAGGCTCCTTCTGTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR GCA 90 bp CAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTATTCTGGTATCAGATACTaGAGCGACAGCAGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: QAPFCYWSQSINGPDGNYSGIRY*SDSSFA
Trigger: AGCAAAACTGCTGTCGCTGCAGTATCTGATACCAGA...ATAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR GCA 90 bp ACAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTATCTGGTATCAGATACTaGAGCGACAGCAGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: TGTLLLLVTINQWSRRQLSGIRY*SDSSFA
Trigger: AGCAAAACTGCTGTCGCTGCAGTATCTGATACCAGA...TAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR GCA 90 bp CGCACACACAGAGTCGGGATCAAAGAATCTTATCTGATACATAGTTGGGGGAGCTCTGGTATCAGATACTaGAGCGACAGCAGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: RTHRVGIKESYLIHSWGSSGIRY*SDSSFA
Trigger: AGCAAAACTGCTGTCGCTGCAGTATCTGATACCAGA...GCTCCCCCAACTATGTATCAGATAAGATTCTTTGATCCCGACTCTGTGTGTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR GCA 90 bp AAGCTGCTCTCTCCTGAAATCACTTTGCAAATTTTGTTGACCAATTTGCAAACACCAGGGGGCAGAGGTTaGAGTGAGCCAAGTTTGCGC +
Preference number: 4 (lower is better)
Translates to: KLLSPEITLQILLTNLQTPGGRG*SEPSLR
Trigger: GCGCAAACTTGGCTCACTGCAACCTCTGCCCCCTGG...TGTTTGCAAATTGGTCAACAAAATTTGCAAAGTGATTTCAGGAGAGAGCAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp CGCACACACAGAGTCGGGATCAAAGAATCTTATCTGATACATAGTTGGGGGAGCAGCTGCAGGTTGTCTTaGTTGATGTCTTGGGCAATA +
Preference number: 4 (lower is better)
Translates to: RTHRVGIKESYLIHSWGSSCRLS*LMSWAI
Trigger: TATTGCCCAAGACATCAACCAAGACAACCTGCAGCT...GCTCCCCCAACTATGTATCAGATAAGATTCTTTGATCCCGACTCTGTGTGTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp TGGACAGGGCTACCCCTACAGATTGGCCCTTTCTCTCCTACAAAAGGGAGTTCAGATTTGTTATCATTTTaGCCCAGTATGGGTCTTTCG +
Preference number: 4 (lower is better)
Translates to: WTGLPLQIGPFSPTKGSSDLLSF*PSMGLS
Trigger: CGAAAGACCCATACTGGGCCAAAATGATAACAAATC...TGAACTCCCTTTTGTAGGAGAGAAAGGGCCAATCTGTAGGGGTAGCCCTGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp CACTTCTTGTGGATATGTGGATGTCTGGTATCAGATACTGCAGCGACAGCAGTTTGGTCATTTGAAGGATaGACTTGCAATGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: HFLWICGCLVSDTAATAVWSFEG*TCNGPG
Trigger: CCCTGGACCATTGCAAGTCCATCCTTCAAATGACCA...AACTGCTGTCGCTGCAGTATCTGATACCAGACATCCACATATCCACAAGAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp TGGACAGGGCTACCCCTACAGATTGGCCCTTTCTCTCCTACAAAAGGGAGTTCAAGTATGGCATGGAAGTaGTTCTTGGGCTATACAAAA +
Preference number: 4 (lower is better)
Translates to: WTGLPLQIGPFSPTKGSSSMAWK*FLGYTK
Trigger: TTTTGTATAGCCCAAGAACCACTTCCATGCCATACT...TGAACTCCCTTTTGTAGGAGAGAAAGGGCCAATCTGTAGGGGTAGCCCTGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp TTTGGACAGAAGGAGCCTCTCTATGTAACAGGCACCCTTCTGCTACTGGTCACATGTTACAGTATGGCATaGAAGTGGTTCTTGGGCTAT +
Preference number: 4 (lower is better)
Translates to: FGQKEPLYVTGTLLLLVTCYSMA*KWFLGY
Trigger: ATAGCCCAAGAACCACTTCCATGCCATACTGTAACA...TGTGACCAGTAGCAGAAGGGTGCCTGTTACATAGAGAGGCTCCTTCTGTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp TGTGGTAGTTGGTCTCCACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGTGTTACAGTATGGCATaGAAGTGGTTCTTGGGCTAT +
Preference number: 4 (lower is better)
Translates to: CGSWSPQFSHPPAILSVWCYSMA*KWFLGY
Trigger: ATAGCCCAAGAACCACTTCCATGCCATACTGTAACA...CCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTGGAGACCAACTACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp CAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTATGCACCCTTCTGCTACTaGTCACAATCAATCAATGGT +
Preference number: 4 (lower is better)
Translates to: QAPFCYWSQSINGPDGNYAPFCY*SQSING
Trigger: ACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGC...ATAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp CAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTATGGATATGTGGATGTCTaGTATCAGATACTGCAGCGA +
Preference number: 4 (lower is better)
Translates to: QAPFCYWSQSINGPDGNYGYVDV*YQILQR
Trigger: TCGCTGCAGTATCTGATACCAGACATCCACATATCC...ATAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp ACTCTATGTTGTATCAGAACCTCAGCGATGGTTCATGGGCTTCCAGCAGAATATCCCCTTCCCAAGATTTaGAACTGTGTAACCCTGAGC +
Preference number: 4 (lower is better)
Translates to: TLCCIRTSAMVHGLPAEYPLPKI*NCVTLS
Trigger: GCTCAGGGTTACACAGTTCCAAATCTTGGGAAGGGG...ATATTCTGCTGGAAGCCCATGAACCATCGCTGAGGTTCTGATACAACATAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR TCA 90 bp ACTCTATGTTGTATCAGAACCTCAGCGATGGTTCATGGGCTTCCAGCAGAATATGCAGGTTGTCTTGGTTaGTGTCTTGGGCAATATGCA +
Preference number: 4 (lower is better)
Translates to: TLCCIRTSAMVHGLPAEYAGCLG*CLGQYA
Trigger: TGCATATTGCCCAAGACATCAACCAAGACAACCTGC...ATATTCTGCTGGAAGCCCATGAACCATCGCTGAGGTTCTGATACAACATAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR TCA 90 bp GTGACTCCCTCACCTAACAGTAGACATGAGGCTGAAAACAACTTTACCTGGACATATGGAGTGGTCATTTaGAGGATGGACTTGCAATGG +
Preference number: 4 (lower is better)
Translates to: VTPSPNSRHEAENNFTWTYGVVI*RMDLQW
Trigger: CCATTGCAAGTCCATCCTTCAAATGACCACTCCATA...TGTCCAGGTAAAGTTGTTTTCAGCCTCATGTCTACTGTTAGGTGAGGGAGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR TCA 90 bp GTTGGTCTCCACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTGACGGCCAGTTTACTGGATaGAATGTTATATTATGGAGT +
Preference number: 4 (lower is better)
Translates to: VGLHNSLTLQQYSLSGCDGQFTG*NVILWS
Trigger: ACTCCATAATATAACATTTCATCCAGTAAACTGGCC...GTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTGGAGACCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR TCA 90 bp CACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGATCAGCTAAAGATGTTCAGTGGCCATGCATaGGTTAAAGATAGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: HGKKLAREDMERSDQLKMFSGHA*VKDSRG
Trigger: GCCTCTACTATCTTTAACTCATGCATGGCCACTGAA...CATCTTTAGCTGATCAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR TCA 90 bp TGTGGTAGTTGGTCTCCACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGTCAAAGAATCTTATCTaGTACATAGTTGGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: CGSWSPQFSHPPAILSVWSKNLI*YIVGGA
Trigger: TGCTCCCCCAACTATGTATCAGATAAGATTCTTTGA...CCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTGGAGACCAACTACCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR TCA 90 bp TTTGGACAGAAGGAGCCTCTCTATGTAACAGGCACCCTTCTGCTACTGGTCACATCCAGACGGCAATTATaGTTTTCCACATTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: FGQKEPLYVTGTLLLLVTSRRQL*FSTFLK
Trigger: TTTGAGGAATGTGGAAAATCATAATTGCCGTCTGGA...TGTGACCAGTAGCAGAAGGGTGCCTGTTACATAGAGAGGCTCCTTCTGTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR GCA 90 bp CACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGATCAGCTAAAGATGCTCTGGATGGTTGAGTaGAAATCTGCTGAGGATGTA +
Preference number: 4 (lower is better)
Translates to: HGKKLAREDMERSDQLKMLWMVE*KSAEDV
Trigger: TACATCCTCAGCAGATTTGCACTCAACCATCCAGAG...CATCTTTAGCTGATCAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR GCA 90 bp AAGCTGCTCTCTCCTGAAATCACTTTGCAAATTTTGTTGACCAATTTGCAAACAGGGCGAGCCGAGTCATaGTGGCAGATGGTATGTAGC +
Preference number: 4 (lower is better)
Translates to: KLLSPEITLQILLTNLQTGRAES*WQMVCS
Trigger: GCTACATACCATCTGCCAGCATGACTCGGCTCGCCC...TGTTTGCAAATTGGTCAACAAAATTTGCAAAGTGATTTCAGGAGAGAGCAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
CDS-3UTR GCA 90 bp GTGACTCCCTCACCTAACAGTAGACATGAGGCTGAAAACAACTTTACCTGGACAGCAAACAAAAGAGAATaGAGTGGCCTACCCAACCTA +
Preference number: 4 (lower is better)
Translates to: VTPSPNSRHEAENNFTWTANKRE*SGLPNL
Trigger: TAGGTTGGGTAGGCCACTGCATTCTCTTTTGTTTGC...TGTCCAGGTAAAGTTGTTTTCAGCCTCATGTCTACTGTTAGGTGAGGGAGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR GCA 90 bp CACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGATCAGCTAAAGATGGCAAACAAAAGAGAATaGAGTGGCCTACCCAACCTA +
Preference number: 4 (lower is better)
Translates to: HGKKLAREDMERSDQLKMANKRE*SGLPNL
Trigger: TAGGTTGGGTAGGCCACTGCATTCTCTTTTGTTTGC...CATCTTTAGCTGATCAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp ACTCTATGTTGTATCAGAACCTCAGCGATGGTTCATGGGCTTCCAGCAGAATATTCCACAAGCTCTGGATaGTTGAGTGCAAATCTGCTG +
Preference number: 4 (lower is better)
Translates to: TLCCIRTSAMVHGLPAEYSTSSG*LSANLL
Trigger: CAGCAGATTTGCACTCAACCATCCAGAGCTTGTGGA...ATATTCTGCTGGAAGCCCATGAACCATCGCTGAGGTTCTGATACAACATAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp ACTCTATGTTGTATCAGAACCTCAGCGATGGTTCATGGGCTTCCAGCAGAATATCATTTTGGCCCAGTATaGGTCTTTCGATCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: TLCCIRTSAMVHGLPAEYHFGPV*VFRSPG
Trigger: ACCTGGAGATCGAAAGACCCATACTGGGCCAAAATG...ATATTCTGCTGGAAGCCCATGAACCATCGCTGAGGTTCTGATACAACATAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp TGTGGTAGTTGGTCTCCACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGGATTTGTTATCATTTTaGCCCAGTATGGGTCTTTCG +
Preference number: 4 (lower is better)
Translates to: CGSWSPQFSHPPAILSVWDLLSF*PSMGLS
Trigger: CGAAAGACCCATACTGGGCCAAAATGATAACAAATC...CCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTGGAGACCAACTACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp ACTCTATGTTGTATCAGAACCTCAGCGATGGTTCATGGGCTTCCAGCAGAATATTGGTCATTTGAAGGATaGACTTGCAATGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: TLCCIRTSAMVHGLPAEYWSFEG*TCNGPG
Trigger: CCCTGGACCATTGCAAGTCCATCCTTCAAATGACCA...ATATTCTGCTGGAAGCCCATGAACCATCGCTGAGGTTCTGATACAACATAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp GTGGATGTCTGGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGAGTATGGCATGGAAGTaGTTCTTGGGCTATACAAAA +
Preference number: 4 (lower is better)
Translates to: VDVWYQILQRQQFCSSEQSMAWK*FLGYTK
Trigger: TTTTGTATAGCCCAAGAACCACTTCCATGCCATACT...CTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACCAGACATCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp CACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGATCAGCTAAAGATGGCACCCTTCTGCTACTaGTCACAATCAATCAATGGT +
Preference number: 4 (lower is better)
Translates to: HGKKLAREDMERSDQLKMAPFCY*SQSING
Trigger: ACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGC...CATCTTTAGCTGATCAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp GTGGATGTCTGGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGCTTCTTGTGGATATGTaGATGTCTGGTATCAGATAC +
Preference number: 4 (lower is better)
Translates to: VDVWYQILQRQQFCSSEQLLVDM*MSGIRY
Trigger: GTATCTGATACCAGACATCCACATATCCACAAGAAG...CTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACCAGACATCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp TTTGGACAGAAGGAGCCTCTCTATGTAACAGGCACCCTTCTGCTACTGGTCACACTTCTTGTGGATATGTaGATGTCTGGTATCAGATAC +
Preference number: 4 (lower is better)
Translates to: FGQKEPLYVTGTLLLLVTLLVDM*MSGIRY
Trigger: GTATCTGATACCAGACATCCACATATCCACAAGAAG...TGTGACCAGTAGCAGAAGGGTGCCTGTTACATAGAGAGGCTCCTTCTGTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR TCA 90 bp ACTCTATGTTGTATCAGAACCTCAGCGATGGTTCATGGGCTTCCAGCAGAATATCCTGAAGTTCATCCATaGGGTCAGATAACGAGAGTA +
Preference number: 4 (lower is better)
Translates to: TLCCIRTSAMVHGLPAEYPEVHP*GQITRV
Trigger: TACTCTCGTTATCTGACCTCATGGATGAACTTCAGG...ATATTCTGCTGGAAGCCCATGAACCATCGCTGAGGTTCTGATACAACATAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR TCA 90 bp GTGGATGTCTGGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGGGCCAGTTTACTGGATaGAATGTTATATTATGGAGT +
Preference number: 4 (lower is better)
Translates to: VDVWYQILQRQQFCSSEQGQFTG*NVILWS
Trigger: ACTCCATAATATAACATTTCATCCAGTAAACTGGCC...CTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACCAGACATCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR TCA 90 bp CACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGATCAGCTAAAGATGGGATATGGAGAGATCTaGTCAGCTAAAGATGTTGGA +
Preference number: 4 (lower is better)
Translates to: HGKKLAREDMERSDQLKMGYGEI*SAKDVG
Trigger: TCCAACATCTTTAGCTGATCAGATCTCTCCATATCC...CATCTTTAGCTGATCAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR TCA 90 bp CACTTCTTGTGGATATGTGGATGTCTGGTATCAGATACTGCAGCGACAGCAGTTGGATATGGAGAGATCTaGTCAGCTAAAGATGTTGGA +
Preference number: 4 (lower is better)
Translates to: HFLWICGCLVSDTAATAVGYGEI*SAKDVG
Trigger: TCCAACATCTTTAGCTGATCAGATCTCTCCATATCC...AACTGCTGTCGCTGCAGTATCTGATACCAGACATCCACATATCCACAAGAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR TCA 90 bp CAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTATTCAAAGAATCTTATCTaGTACATAGTTGGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: QAPFCYWSQSINGPDGNYSKNLI*YIVGGA
Trigger: TGCTCCCCCAACTATGTATCAGATAAGATTCTTTGA...ATAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR TCA 90 bp CGCACACACAGAGTCGGGATCAAAGAATCTTATCTGATACATAGTTGGGGGAGCTCAAAGAATCTTATCTaGTACATAGTTGGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: RTHRVGIKESYLIHSWGSSKNLI*YIVGGA
Trigger: TGCTCCCCCAACTATGTATCAGATAAGATTCTTTGA...GCTCCCCCAACTATGTATCAGATAAGATTCTTTGATCCCGACTCTGTGTGTGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR GCA 90 bp CACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGATCAGCTAAAGATGGAATTCAAGAAGAGCTaGAGGTTGTCTTGGTTGATG +
Preference number: 4 (lower is better)
Translates to: HGKKLAREDMERSDQLKMEFKKS*RLSWLM
Trigger: CATCAACCAAGACAACCTGCAGCTCTTCTTGAATTC...CATCTTTAGCTGATCAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR GCA 90 bp ACTCTATGTTGTATCAGAACCTCAGCGATGGTTCATGGGCTTCCAGCAGAATATGCAAACAAAAGAGAATaGAGTGGCCTACCCAACCTA +
Preference number: 4 (lower is better)
Translates to: TLCCIRTSAMVHGLPAEYANKRE*SGLPNL
Trigger: TAGGTTGGGTAGGCCACTGCATTCTCTTTTGTTTGC...ATATTCTGCTGGAAGCCCATGAACCATCGCTGAGGTTCTGATACAACATAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR GCA 90 bp ACTCTATGTTGTATCAGAACCTCAGCGATGGTTCATGGGCTTCCAGCAGAATATTCTCCCCCATCTACATaGTTTTTAGGCCAAACCTCT +
Preference number: 4 (lower is better)
Translates to: TLCCIRTSAMVHGLPAEYSPPST*FLGQTS
Trigger: AGAGGTTTGGCCTAAAAAGCATGTAGATGGGGGAGA...ATATTCTGCTGGAAGCCCATGAACCATCGCTGAGGTTCTGATACAACATAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp CGCACACACAGAGTCGGGATCAAAGAATCTTATCTGATACATAGTTGGGGGAGCGATTTGTTATCATTTTaGCCCAGTATGGGTCTTTCG +
Preference number: 4 (lower is better)
Translates to: RTHRVGIKESYLIHSWGSDLLSF*PSMGLS
Trigger: CGAAAGACCCATACTGGGCCAAAATGATAACAAATC...GCTCCCCCAACTATGTATCAGATAAGATTCTTTGATCCCGACTCTGTGTGTGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp ACAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTAGATTTGTTATCATTTTaGCCCAGTATGGGTCTTTCG +
Preference number: 4 (lower is better)
Translates to: TGTLLLLVTINQWSRRQLDLLSF*PSMGLS
Trigger: CGAAAGACCCATACTGGGCCAAAATGATAACAAATC...TAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp ACAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTAAGTATGGCATGGAAGTaGTTCTTGGGCTATACAAAA +
Preference number: 4 (lower is better)
Translates to: TGTLLLLVTINQWSRRQLSMAWK*FLGYTK
Trigger: TTTTGTATAGCCCAAGAACCACTTCCATGCCATACT...TAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp GTGGATGTCTGGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGATACAGAAATTCATTTaGACAGAAGGAGCCTCTCTA +
Preference number: 4 (lower is better)
Translates to: VDVWYQILQRQQFCSSEQIQKFI*TEGASL
Trigger: TAGAGAGGCTCCTTCTGTCCAAATGAATTTCTGTAT...CTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACCAGACATCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp CAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTATCTTCTTGTGGATATGTaGATGTCTGGTATCAGATAC +
Preference number: 4 (lower is better)
Translates to: QAPFCYWSQSINGPDGNYLLVDM*MSGIRY
Trigger: GTATCTGATACCAGACATCCACATATCCACAAGAAG...ATAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp CACTTCTTGTGGATATGTGGATGTCTGGTATCAGATACTGCAGCGACAGCAGTTTTGCTATGTGGTAGTTaGTCTCCACAATTCTCTCAC +
Preference number: 4 (lower is better)
Translates to: HFLWICGCLVSDTAATAVLLCGS*SPQFSH
Trigger: GTGAGAGAATTGTGGAGACCAACTACCACATAGCAA...AACTGCTGTCGCTGCAGTATCTGATACCAGACATCCACATATCCACAAGAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR TCA 90 bp GTGACTCCCTCACCTAACAGTAGACATGAGGCTGAAAACAACTTTACCTGGACAAACAGGATTTATGGTTaGGGCCAATGTCATGATATG +
Preference number: 4 (lower is better)
Translates to: VTPSPNSRHEAENNFTWTNRIYG*GQCHDM
Trigger: CATATCATGACATTGGCCTCAACCATAAATCCTGTT...TGTCCAGGTAAAGTTGTTTTCAGCCTCATGTCTACTGTTAGGTGAGGGAGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR TCA 90 bp CGCACACACAGAGTCGGGATCAAAGAATCTTATCTGATACATAGTTGGGGGAGCGGCCAGTTTACTGGATaGAATGTTATATTATGGAGT +
Preference number: 4 (lower is better)
Translates to: RTHRVGIKESYLIHSWGSGQFTG*NVILWS
Trigger: ACTCCATAATATAACATTTCATCCAGTAAACTGGCC...GCTCCCCCAACTATGTATCAGATAAGATTCTTTGATCCCGACTCTGTGTGTGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR TCA 90 bp CACTTCTTGTGGATATGTGGATGTCTGGTATCAGATACTGCAGCGACAGCAGTTTCCAGACGGCAATTATaGTTTTCCACATTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: HFLWICGCLVSDTAATAVSRRQL*FSTFLK
Trigger: TTTGAGGAATGTGGAAAATCATAATTGCCGTCTGGA...AACTGCTGTCGCTGCAGTATCTGATACCAGACATCCACATATCCACAAGAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR GCA 90 bp AAGCTGCTCTCTCCTGAAATCACTTTGCAAATTTTGTTGACCAATTTGCAAACAGGTTCAGGCGGGAATTaGATTCGACCACAGCCTCAA +
Preference number: 4 (lower is better)
Translates to: KLLSPEITLQILLTNLQTGSGGN*IRPQPQ
Trigger: TTGAGGCTGTGGTCGAATGCAATTCCCGCCTGAACC...TGTTTGCAAATTGGTCAACAAAATTTGCAAAGTGATTTCAGGAGAGAGCAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp ACTCTATGTTGTATCAGAACCTCAGCGATGGTTCATGGGCTTCCAGCAGAATATTGTTACAGTATGGCATaGAAGTGGTTCTTGGGCTAT +
Preference number: 4 (lower is better)
Translates to: TLCCIRTSAMVHGLPAEYCYSMA*KWFLGY
Trigger: ATAGCCCAAGAACCACTTCCATGCCATACTGTAACA...ATATTCTGCTGGAAGCCCATGAACCATCGCTGAGGTTCTGATACAACATAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp ACAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTAATACAGAAATTCATTTaGACAGAAGGAGCCTCTCTA +
Preference number: 4 (lower is better)
Translates to: TGTLLLLVTINQWSRRQLIQKFI*TEGASL
Trigger: TAGAGAGGCTCCTTCTGTCCAAATGAATTTCTGTAT...TAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR TCA 90 bp GTGACTCCCTCACCTAACAGTAGACATGAGGCTGAAAACAACTTTACCTGGACAAAAGCTGCTCTCTCCTaGAATCACTTTGCAAATTTT +
Preference number: 4 (lower is better)
Translates to: VTPSPNSRHEAENNFTWTKAALS*NHFANF
Trigger: AAAATTTGCAAAGTGATTTCAGGAGAGAGCAGCTTT...TGTCCAGGTAAAGTTGTTTTCAGCCTCATGTCTACTGTTAGGTGAGGGAGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR GCA 90 bp AAGCTGCTCTCTCCTGAAATCACTTTGCAAATTTTGTTGACCAATTTGCAAACACAAGAGCTGGGCTCTTaGTATGTGGTAGTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: KLLSPEITLQILLTNLQTQELGS*YVVVGL
Trigger: GAGACCAACTACCACATAGCAAGAGCCCAGCTCTTG...TGTTTGCAAATTGGTCAACAAAATTTGCAAAGTGATTTCAGGAGAGAGCAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp AAGCTGCTCTCTCCTGAAATCACTTTGCAAATTTTGTTGACCAATTTGCAAACACCAGCTCATCCATTGTaGGGTACTGATACCCTGTTG +
Preference number: 4 (lower is better)
Translates to: KLLSPEITLQILLTNLQTPAHPL*GTDTLL
Trigger: CAACAGGGTATCAGTACCCCACAATGGATGAGCTGG...TGTTTGCAAATTGGTCAACAAAATTTGCAAAGTGATTTCAGGAGAGAGCAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CCA 90 bp AAGCTGCTCTCTCCTGAAATCACTTTGCAAATTTTGTTGACCAATTTGCAAACACTTTTCAGGCTTAGGTaGGTAAGAACAGGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: KLLSPEITLQILLTNLQTLFRLR*VRTGGS
Trigger: GCTGCCTCCTGTTCTTACCCACCTAAGCCTGAAAAG...TGTTTGCAAATTGGTCAACAAAATTTGCAAAGTGATTTCAGGAGAGAGCAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
3UTR CAA 72 bp AGAGAGGATATGGAGAGATCTGATCAGCTAAAGATGTaGGAATGTTACAGTATGGCATGGAAGTGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: REDMERSDQLKM*ECYSMAWKWFL
Trigger: CAAGAACCACTTCCATGCCATACTGTAACATTCCAACATCTTTAGCTGATCAGATCTCTCCATATCCTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR TCA 90 bp AAGCTGCTCTCTCCTGAAATCACTTTGCAAATTTTGTTGACCAATTTGCAAACAGCAGGTTGTCTTGGTTaGTGTCTTGGGCAATATGCA +
Preference number: 4 (lower is better)
Translates to: KLLSPEITLQILLTNLQTAGCLG*CLGQYA
Trigger: TGCATATTGCCCAAGACATCAACCAAGACAACCTGC...TGTTTGCAAATTGGTCAACAAAATTTGCAAAGTGATTTCAGGAGAGAGCAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR TCA 90 bp ACTCTATGTTGTATCAGAACCTCAGCGATGGTTCATGGGCTTCCAGCAGAATATGGCCAGTTTACTGGATaGAATGTTATATTATGGAGT +
Preference number: 4 (lower is better)
Translates to: TLCCIRTSAMVHGLPAEYGQFTG*NVILWS
Trigger: ACTCCATAATATAACATTTCATCCAGTAAACTGGCC...ATATTCTGCTGGAAGCCCATGAACCATCGCTGAGGTTCTGATACAACATAGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR GCA 90 bp AAGCTGCTCTCTCCTGAAATCACTTTGCAAATTTTGTTGACCAATTTGCAAACAAGAGAGTTTGGAAGCTaGCCAGTCAATCCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: KLLSPEITLQILLTNLQTREFGS*PVNPAF
Trigger: AAAGGCTGGATTGACTGGGCAGCTTCCAAACTCTCT...TGTTTGCAAATTGGTCAACAAAATTTGCAAAGTGATTTCAGGAGAGAGCAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR TCA 90 bp AAGCTGCTCTCTCCTGAAATCACTTTGCAAATTTTGTTGACCAATTTGCAAACATTCAGTGGCCATGCATaGGTTAAAGATAGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: KLLSPEITLQILLTNLQTFSGHA*VKDSRG
Trigger: GCCTCTACTATCTTTAACTCATGCATGGCCACTGAA...TGTTTGCAAATTGGTCAACAAAATTTGCAAAGTGATTTCAGGAGAGAGCAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp AAGCTGCTCTCTCCTGAAATCACTTTGCAAATTTTGTTGACCAATTTGCAAACAAGCTGCAGGTTGTCTTaGTTGATGTCTTGGGCAATA +
Preference number: 4 (lower is better)
Translates to: KLLSPEITLQILLTNLQTSCRLS*LMSWAI
Trigger: TATTGCCCAAGACATCAACCAAGACAACCTGCAGCT...TGTTTGCAAATTGGTCAACAAAATTTGCAAAGTGATTTCAGGAGAGAGCAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp AAGCTGCTCTCTCCTGAAATCACTTTGCAAATTTTGTTGACCAATTTGCAAACACAAAAGAGAATGCAGTaGCCTACCCAACCTAGAAAT +
Preference number: 4 (lower is better)
Translates to: KLLSPEITLQILLTNLQTQKRMQ*PTQPRN
Trigger: ATTTCTAGGTTGGGTAGGCCACTGCATTCTCTTTTG...TGTTTGCAAATTGGTCAACAAAATTTGCAAAGTGATTTCAGGAGAGAGCAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CCA 90 bp AAGCTGCTCTCTCCTGAAATCACTTTGCAAATTTTGTTGACCAATTTGCAAACACTTCTTGTGGATATGTaGATGTCTGGTATCAGATAC +
Preference number: 4 (lower is better)
Translates to: KLLSPEITLQILLTNLQTLLVDM*MSGIRY
Trigger: GTATCTGATACCAGACATCCACATATCCACAAGAAG...TGTTTGCAAATTGGTCAACAAAATTTGCAAAGTGATTTCAGGAGAGAGCAGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS CCA 90 bp CGGCTGAAGGGACTTTCTCCAGAGCCGAGGCTACTCGAGGTTGAGTaGGTTCGTGATCGGGCGAGCCGAGTCATGCTGGCAGATGGTATG +
Preference number: 5 (lower is better)
Translates to: RLKGLSPEPRLLEVE*VRDRASRVMLADGM
Trigger: CATACCATCTGCCAGCATGACTCGGCTCGCCCGATCACGAACCCACTCAACCTCGAGTAGCCTCGGCTCTGGAGAAAGTCCCTTCAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
CDS CCA 90 bp CGGCTGAAGGGACTTTCTCCAGAGCCGAGGCTACTCGAGGTTGAGTaGGTTCGTGATCGGGCGAGCCGAGTCATGCTGGCAGATGGTACT +
Preference number: 5 (lower is better)
Translates to: RLKGLSPEPRLLEVE*VRDRASRVMLADGT
Trigger: AGTACCATCTGCCAGCATGACTCGGCTCGCCCGATCACGAACCCACTCAACCTCGAGTAGCCTCGGCTCTGGAGAAAGTCCCTTCAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373803.6
CDS-3UTR CAA 90 bp CCTGGACAGGGCTACCCCTACAGATTGGCCCTTTCTCTCCTACAAAAGGGAGTTCGAGGCTACTCGAGGTaGAGTGGGTTCGTGATCGGG +
Preference number: 5 (lower is better)
Translates to: PGQGYPYRLALSLLQKGVRGYSR*SGFVIG
Trigger: CCCGATCACGAACCCACTCAACCTCGAGTAGCCTCG...AACTCCCTTTTGTAGGAGAGAAAGGGCCAATCTGTAGGGGTAGCCCTGTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS CCA 90 bp TGCAATGGTCCAGGGGAGGAGCATCTGCTTAGCAGGACACCTCCATaGTCTGGTGTCTGTCCAGGACATCAGGGGACTCACAGGATTCTT +
Preference number: 5 (lower is better)
Translates to: CNGPGEEHLLSRTPP*SGVCPGHQGTHRIL
Trigger: AAGAATCCTGTGAGTCCCCTGATGTCCTGGACAGACACCAGACCATGGAGGTGTCCTGCTAAGCAGATGCTCCTCCCCTGGACCATTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp GGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGAGGCCTGGCAGGGTTCAGGCGGGAATaGCATTCGACCACAGCCTCA +
Preference number: 5 (lower is better)
Translates to: GIRYCSDSSFALQSRGLAGFRRE*HSTTAS
Trigger: TGAGGCTGTGGTCGAATGCAATTCCCGCCTGAACCC...TGCCAGGCCTCTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp CATAGTTGGGGGAGCACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGCGAGGCTACTCGAGGTaGAGTGGGTTCGTGATCGGG +
Preference number: 5 (lower is better)
Translates to: HSWGSTGKSWQERIWRDLRGYSR*SGFVIG
Trigger: CCCGATCACGAACCCACTCAACCTCGAGTAGCCTCG...CAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTGCTCCCCCAACTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp CACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTGACTCCCTCACCCAGCCAGCTCATCCATaGTGGGGTACTGATACCCTG +
Preference number: 5 (lower is better)
Translates to: HNSLTLQQYSLSGCDSLTQPAHP*WGTDTL
Trigger: CAGGGTATCAGTACCCCACAATGGATGAGCTGGCTG...GGTGAGGGAGTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CAA 90 bp GGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGAGGCCTGGCAGTCAGGCCAGAGAGTTaGGAAGCTGCCCAGTCAATC +
Preference number: 5 (lower is better)
Translates to: GIRYCSDSSFALQSRGLAVRPES*EAAQSI
Trigger: GATTGACTGGGCAGCTTCCAAACTCTCTGGCCTGAC...TGCCAGGCCTCTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp CCTGGACAGGGCTACCCCTACAGATTGGCCCTTTCTCTCCTACAAAAGGGAGTTTGGATCAGGTCCAGGTaGGCCTGTAACTCTTCCTGC +
Preference number: 5 (lower is better)
Translates to: PGQGYPYRLALSLLQKGVWIRSR*ACNSSC
Trigger: GCAGGAAGAGTTACAGGCCAACCTGGACCTGATCCA...AACTCCCTTTTGTAGGAGAGAAAGGGCCAATCTGTAGGGGTAGCCCTGTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CAA 90 bp GTTGGTCTCCACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTGACGGGTTCAGGCGGGAATaGCATTCGACCACAGCCTCA +
Preference number: 5 (lower is better)
Translates to: VGLHNSLTLQQYSLSGCDGFRRE*HSTTAS
Trigger: TGAGGCTGTGGTCGAATGCAATTCCCGCCTGAACCC...GTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTGGAGACCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CAA 90 bp CAGAGCAGAGGCCTGGCATTTTGTTTCCACCTTCCTGTGCTAAGAGAGTCCAGTGGGTTCAGGCGGGAATaGCATTCGACCACAGCCTCA +
Preference number: 5 (lower is better)
Translates to: QSRGLAFCFHLPVLRESSGFRRE*HSTTAS
Trigger: TGAGGCTGTGGTCGAATGCAATTCCCGCCTGAACCC...ACTGGACTCTCTTAGCACAGGAAGGTGGAAACAAAATGCCAGGCCTCTGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp CACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTGACTCCCTCACCGGTACTGATACCCTGTaGGGAAAGAGGGTGCACCTT +
Preference number: 5 (lower is better)
Translates to: HNSLTLQQYSLSGCDSLTGTDTL*GKRVHL
Trigger: AAGGTGCACCCTCTTTCCCAACAGGGTATCAGTACC...GGTGAGGGAGTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CAA 90 bp CATAGTTGGGGGAGCACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGCAGCCAGCTCATCCATaGTGGGGTACTGATACCCTG +
Preference number: 5 (lower is better)
Translates to: HSWGSTGKSWQERIWRDLQPAHP*WGTDTL
Trigger: CAGGGTATCAGTACCCCACAATGGATGAGCTGGCTG...CAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTGCTCCCCCAACTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CAA 90 bp CAGAGCAGAGGCCTGGCATTTTGTTTCCACCTTCCTGTGCTAAGAGAGTCCAGTGTCAGGCCAGAGAGTTaGGAAGCTGCCCAGTCAATC +
Preference number: 5 (lower is better)
Translates to: QSRGLAFCFHLPVLRESSVRPES*EAAQSI
Trigger: GATTGACTGGGCAGCTTCCAAACTCTCTGGCCTGAC...ACTGGACTCTCTTAGCACAGGAAGGTGGAAACAAAATGCCAGGCCTCTGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp TGGACAGGGCTACCCCTACAGATTGGCCCTTTCTCTCCTACAAAAGGGAGTTCATGGATCAGGTCCAGGTaGGCCTGTAACTCTTCCTGC +
Preference number: 5 (lower is better)
Translates to: WTGLPLQIGPFSPTKGSSWIRSR*ACNSSC
Trigger: GCAGGAAGAGTTACAGGCCAACCTGGACCTGATCCA...TGAACTCCCTTTTGTAGGAGAGAAAGGGCCAATCTGTAGGGGTAGCCCTGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CAA 90 bp CATAGTTGGGGGAGCACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGTGGATCAGGTCCAGGTaGGCCTGTAACTCTTCCTGC +
Preference number: 5 (lower is better)
Translates to: HSWGSTGKSWQERIWRDLWIRSR*ACNSSC
Trigger: GCAGGAAGAGTTACAGGCCAACCTGGACCTGATCCA...CAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTGCTCCCCCAACTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp CAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTATCGAGGCTACTCGAGGTaGAGTGGGTTCGTGATCGGG +
Preference number: 5 (lower is better)
Translates to: QAPFCYWSQSINGPDGNYRGYSR*SGFVIG
Trigger: CCCGATCACGAACCCACTCAACCTCGAGTAGCCTCG...ATAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp ACAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTACGAGGCTACTCGAGGTaGAGTGGGTTCGTGATCGGG +
Preference number: 5 (lower is better)
Translates to: TGTLLLLVTINQWSRRQLRGYSR*SGFVIG
Trigger: CCCGATCACGAACCCACTCAACCTCGAGTAGCCTCG...TAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp TTTGGACAGAAGGAGCCTCTCTATGTAACAGGCACCCTTCTGCTACTGGTCACAGCAGCGACAGCAGTTTaGCTCTTCAGAGCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: FGQKEPLYVTGTLLLLVTAATAV*LFRAEA
Trigger: GGCCTCTGCTCTGAAGAGCAAAACTGCTGTCGCTGC...TGTGACCAGTAGCAGAAGGGTGCCTGTTACATAGAGAGGCTCCTTCTGTCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp TGTGGTAGTTGGTCTCCACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGGCAGCGACAGCAGTTTaGCTCTTCAGAGCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: CGSWSPQFSHPPAILSVWAATAV*LFRAEA
Trigger: GGCCTCTGCTCTGAAGAGCAAAACTGCTGTCGCTGC...CCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTGGAGACCAACTACCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CAA 90 bp GTGGATGTCTGGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGGCAGCGACAGCAGTTTaGCTCTTCAGAGCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: VDVWYQILQRQQFCSSEQAATAV*LFRAEA
Trigger: GGCCTCTGCTCTGAAGAGCAAAACTGCTGTCGCTGC...CTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACCAGACATCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp GTGGATGTCTGGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGGCCAAGTTTGCGCCATaGCACTCCAGCCTGGGTAAC +
Preference number: 5 (lower is better)
Translates to: VDVWYQILQRQQFCSSEQAKFAP*HSSLGN
Trigger: GTTACCCAGGCTGGAGTGCAATGGCGCAAACTTGGC...CTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACCAGACATCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CAA 90 bp GGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGAGGCCTGGCACCAAGAGCTGGGCTCTaGCTATGTGGTAGTTGGTCT +
Preference number: 5 (lower is better)
Translates to: GIRYCSDSSFALQSRGLAPRAGL*LCGSWS
Trigger: AGACCAACTACCACATAGCAAGAGCCCAGCTCTTGG...TGCCAGGCCTCTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS TCA 90 bp TCTGTCCAGGACATCAGGGGACTCACAGGATTCTTGAGTTCCATCTaGCTGATTGCTGGTGACAGACCGGCTGAAGGGACTTTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: SVQDIRGLTGFLSSI*LIAGDRPAEGTFSR
Trigger: TCTGGAGAAAGTCCCTTCAGCCGGTCTGTCACCAGCAATCAGTCAGATGGAACTCAAGAATCCTGTGAGTCCCCTGATGTCCTGGACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp CAGAGCAGAGGCCTGGCATTTTGTTTCCACCTTCCTGTGCTAAGAGAGTCCAGTGGTACTGATACCCTGTaGGGAAAGAGGGTGCACCTT +
Preference number: 5 (lower is better)
Translates to: QSRGLAFCFHLPVLRESSGTDTL*GKRVHL
Trigger: AAGGTGCACCCTCTTTCCCAACAGGGTATCAGTACC...ACTGGACTCTCTTAGCACAGGAAGGTGGAAACAAAATGCCAGGCCTCTGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CAA 90 bp TTTGGACAGAAGGAGCCTCTCTATGTAACAGGCACCCTTCTGCTACTGGTCACACAGCCAGCTCATCCATaGTGGGGTACTGATACCCTG +
Preference number: 5 (lower is better)
Translates to: FGQKEPLYVTGTLLLLVTQPAHP*WGTDTL
Trigger: CAGGGTATCAGTACCCCACAATGGATGAGCTGGCTG...TGTGACCAGTAGCAGAAGGGTGCCTGTTACATAGAGAGGCTCCTTCTGTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CAA 90 bp GTGGATGTCTGGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGGTCAGGCCAGAGAGTTaGGAAGCTGCCCAGTCAATC +
Preference number: 5 (lower is better)
Translates to: VDVWYQILQRQQFCSSEQVRPES*EAAQSI
Trigger: GATTGACTGGGCAGCTTCCAAACTCTCTGGCCTGAC...CTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACCAGACATCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp GGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGAGGCCTGGCATGTCCACAACATTGGTaGTCAGGCCAGAGAGTTTGG +
Preference number: 5 (lower is better)
Translates to: GIRYCSDSSFALQSRGLACPQHW*SGQRVW
Trigger: CCAAACTCTCTGGCCTGACAACCAATGTTGTGGACA...TGCCAGGCCTCTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp CAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTATGCCAAGTTTGCGCCATaGCACTCCAGCCTGGGTAAC +
Preference number: 5 (lower is better)
Translates to: QAPFCYWSQSINGPDGNYAKFAP*HSSLGN
Trigger: GTTACCCAGGCTGGAGTGCAATGGCGCAAACTTGGC...ATAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CAA 90 bp CGCACACACAGAGTCGGGATCAAAGAATCTTATCTGATACATAGTTGGGGGAGCGCCAAGTTTGCGCCATaGCACTCCAGCCTGGGTAAC +
Preference number: 5 (lower is better)
Translates to: RTHRVGIKESYLIHSWGSAKFAP*HSSLGN
Trigger: GTTACCCAGGCTGGAGTGCAATGGCGCAAACTTGGC...GCTCCCCCAACTATGTATCAGATAAGATTCTTTGATCCCGACTCTGTGTGTGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CAA 90 bp CAGAGCAGAGGCCTGGCATTTTGTTTCCACCTTCCTGTGCTAAGAGAGTCCAGTATGCATTCTGTAGGTTaGGATCAGGTCCAGGTTGGC +
Preference number: 5 (lower is better)
Translates to: QSRGLAFCFHLPVLRESSMHSVG*DQVQVG
Trigger: GCCAACCTGGACCTGATCCAAACCTACAGAATGCAT...ACTGGACTCTCTTAGCACAGGAAGGTGGAAACAAAATGCCAGGCCTCTGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp GTTGGTCTCCACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTGACTCAACTGCAGGCGAATaGTCCCCTACCACCAGTAAA +
Preference number: 5 (lower is better)
Translates to: VGLHNSLTLQQYSLSGCDSTAGE*SPTTSK
Trigger: TTTACTGGTGGTAGGGGACAATTCGCCTGCAGTTGA...GTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTGGAGACCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS TCA 90 bp AAACTCCATCTGAAGATGAATGTGCAGAGACCCTGGCTAAGGAGCTaGTTCAGTTGTCAGGCCACTGCAGGGAGTAACGTGCTGTTGCTA +
Preference number: 5 (lower is better)
Translates to: KLHLKMNVQRPWLRS*FSCQATAGSNVLLL
Trigger: TAGCAACAGCACGTTACTCCCTGCAGTGGCCTGACAACTGAATCAGCTCCTTAGCCAGGGTCTCTGCACATTCATCTTCAGATGGAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422536.2
CDS-3UTR CAA 90 bp CGCACACACAGAGTCGGGATCAAAGAATCTTATCTGATACATAGTTGGGGGAGCGGTACTGATACCCTGTaGGGAAAGAGGGTGCACCTT +
Preference number: 5 (lower is better)
Translates to: RTHRVGIKESYLIHSWGSGTDTL*GKRVHL
Trigger: AAGGTGCACCCTCTTTCCCAACAGGGTATCAGTACC...GCTCCCCCAACTATGTATCAGATAAGATTCTTTGATCCCGACTCTGTGTGTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CAA 90 bp CACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGATCAGCTAAAGATGGTCAGGCCAGAGAGTTaGGAAGCTGCCCAGTCAATC +
Preference number: 5 (lower is better)
Translates to: HGKKLAREDMERSDQLKMVRPES*EAAQSI
Trigger: GATTGACTGGGCAGCTTCCAAACTCTCTGGCCTGAC...CATCTTTAGCTGATCAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp CACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTGACTCCCTCACCATAATGTCCACAACATaGGTTGTCAGGCCAGAGAGT +
Preference number: 5 (lower is better)
Translates to: HNSLTLQQYSLSGCDSLTIMSTT*VVRPES
Trigger: ACTCTCTGGCCTGACAACCAATGTTGTGGACATTAT...GGTGAGGGAGTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CAA 90 bp GTTGGTCTCCACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTGACAAGAAGAGCTGCAGGTaGTCTTGGTTGATGTCTTGG +
Preference number: 5 (lower is better)
Translates to: VGLHNSLTLQQYSLSGCDKKSCR*SWLMSW
Trigger: CCAAGACATCAACCAAGACAACCTGCAGCTCTTCTT...GTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTGGAGACCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CAA 90 bp TGTGGTAGTTGGTCTCCACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGTCAACTGCAGGCGAATaGTCCCCTACCACCAGTAAA +
Preference number: 5 (lower is better)
Translates to: CGSWSPQFSHPPAILSVWSTAGE*SPTTSK
Trigger: TTTACTGGTGGTAGGGGACAATTCGCCTGCAGTTGA...CCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTGGAGACCAACTACCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CAA 90 bp TTTGGACAGAAGGAGCCTCTCTATGTAACAGGCACCCTTCTGCTACTGGTCACATCAACTGCAGGCGAATaGTCCCCTACCACCAGTAAA +
Preference number: 5 (lower is better)
Translates to: FGQKEPLYVTGTLLLLVTSTAGE*SPTTSK
Trigger: TTTACTGGTGGTAGGGGACAATTCGCCTGCAGTTGA...TGTGACCAGTAGCAGAAGGGTGCCTGTTACATAGAGAGGCTCCTTCTGTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp ACTCTATGTTGTATCAGAACCTCAGCGATGGTTCATGGGCTTCCAGCAGAATATGGGTTCAGGCGGGAATaGCATTCGACCACAGCCTCA +
Preference number: 5 (lower is better)
Translates to: TLCCIRTSAMVHGLPAEYGFRRE*HSTTAS
Trigger: TGAGGCTGTGGTCGAATGCAATTCCCGCCTGAACCC...ATATTCTGCTGGAAGCCCATGAACCATCGCTGAGGTTCTGATACAACATAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp ACTCTATGTTGTATCAGAACCTCAGCGATGGTTCATGGGCTTCCAGCAGAATATGCAGCGACAGCAGTTTaGCTCTTCAGAGCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: TLCCIRTSAMVHGLPAEYAATAV*LFRAEA
Trigger: GGCCTCTGCTCTGAAGAGCAAAACTGCTGTCGCTGC...ATATTCTGCTGGAAGCCCATGAACCATCGCTGAGGTTCTGATACAACATAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp GGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGAGGCCTGGCAGGACCACACCATGAGTaGTTTCTATATCATGTTCCT +
Preference number: 5 (lower is better)
Translates to: GIRYCSDSSFALQSRGLAGPHHE*FLYHVP
Trigger: AGGAACATGATATAGAAACAACTCATGGTGTGGTCC...TGCCAGGCCTCTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CAA 90 bp CAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTATACAAGCTCTGGATGGTaGAGTGCAAATCTGCTGAGG +
Preference number: 5 (lower is better)
Translates to: QAPFCYWSQSINGPDGNYTSSGW*SANLLR
Trigger: CCTCAGCAGATTTGCACTCAACCATCCAGAGCTTGT...ATAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp CGCACACACAGAGTCGGGATCAAAGAATCTTATCTGATACATAGTTGGGGGAGCTGTCCACAACATTGGTaGTCAGGCCAGAGAGTTTGG +
Preference number: 5 (lower is better)
Translates to: RTHRVGIKESYLIHSWGSCPQHW*SGQRVW
Trigger: CCAAACTCTCTGGCCTGACAACCAATGTTGTGGACA...GCTCCCCCAACTATGTATCAGATAAGATTCTTTGATCCCGACTCTGTGTGTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp ACAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTAATGCATTCTGTAGGTTaGGATCAGGTCCAGGTTGGC +
Preference number: 5 (lower is better)
Translates to: TGTLLLLVTINQWSRRQLMHSVG*DQVQVG
Trigger: GCCAACCTGGACCTGATCCAAACCTACAGAATGCAT...TAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp CAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTATATGCATTCTGTAGGTTaGGATCAGGTCCAGGTTGGC +
Preference number: 5 (lower is better)
Translates to: QAPFCYWSQSINGPDGNYMHSVG*DQVQVG
Trigger: GCCAACCTGGACCTGATCCAAACCTACAGAATGCAT...ATAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp GGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGAGGCCTGGCAGTCTTGGTTGATGTCTaGGGCAATATGCATTCTGTA +
Preference number: 5 (lower is better)
Translates to: GIRYCSDSSFALQSRGLAVLVDV*GNMHSV
Trigger: TACAGAATGCATATTGCCCAAGACATCAACCAAGAC...TGCCAGGCCTCTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp TTTGGACAGAAGGAGCCTCTCTATGTAACAGGCACCCTTCTGCTACTGGTCACAAAGAAGAGCTGCAGGTaGTCTTGGTTGATGTCTTGG +
Preference number: 5 (lower is better)
Translates to: FGQKEPLYVTGTLLLLVTKKSCR*SWLMSW
Trigger: CCAAGACATCAACCAAGACAACCTGCAGCTCTTCTT...TGTGACCAGTAGCAGAAGGGTGCCTGTTACATAGAGAGGCTCCTTCTGTCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp CAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTATTCAACTGCAGGCGAATaGTCCCCTACCACCAGTAAA +
Preference number: 5 (lower is better)
Translates to: QAPFCYWSQSINGPDGNYSTAGE*SPTTSK
Trigger: TTTACTGGTGGTAGGGGACAATTCGCCTGCAGTTGA...ATAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp CACAATTCTCTCACCCTCCAGCAATACTCTCTGTCTGGCTGTGACTCCCTCACCTTATGGAGTGGTCATTaGAAGGATGGACTTGCAATG +
Preference number: 5 (lower is better)
Translates to: HNSLTLQQYSLSGCDSLTLWSGH*KDGLAM
Trigger: CATTGCAAGTCCATCCTTCAAATGACCACTCCATAA...GGTGAGGGAGTCACAGCCAGACAGAGAGTATTGCTGGAGGGTGAGAGAATTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CAA 90 bp CACTTCTTGTGGATATGTGGATGTCTGGTATCAGATACTGCAGCGACAGCAGTTCCAAGAGCTGGGCTCTaGCTATGTGGTAGTTGGTCT +
Preference number: 5 (lower is better)
Translates to: HFLWICGCLVSDTAATAVPRAGL*LCGSWS
Trigger: AGACCAACTACCACATAGCAAGAGCCCAGCTCTTGG...AACTGCTGTCGCTGCAGTATCTGATACCAGACATCCACATATCCACAAGAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CAA 90 bp GTGACTCCCTCACCTAACAGTAGACATGAGGCTGAAAACAACTTTACCTGGACAGCCCCTTCCCAAGATTaGGAACTGTGTAACCCTGAG +
Preference number: 5 (lower is better)
Translates to: VTPSPNSRHEAENNFTWTAPSQD*ELCNPE
Trigger: CTCAGGGTTACACAGTTCCAAATCTTGGGAAGGGGC...TGTCCAGGTAAAGTTGTTTTCAGCCTCATGTCTACTGTTAGGTGAGGGAGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CAA 90 bp GACATGAGGCTGAAAACAACTTTACCTGGACAGGGCTACCCCTACAGATTGGCCGGACCACACCATGAGTaGTTTCTATATCATGTTCCT +
Preference number: 5 (lower is better)
Translates to: DMRLKTTLPGQGYPYRLAGPHHE*FLYHVP
Trigger: AGGAACATGATATAGAAACAACTCATGGTGTGGTCC...GGCCAATCTGTAGGGGTAGCCCTGTCCAGGTAAAGTTGTTTTCAGCCTCATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CAA 90 bp GTGACTCCCTCACCTAACAGTAGACATGAGGCTGAAAACAACTTTACCTGGACAACAAGCTCTGGATGGTaGAGTGCAAATCTGCTGAGG +
Preference number: 5 (lower is better)
Translates to: VTPSPNSRHEAENNFTWTTSSGW*SANLLR
Trigger: CCTCAGCAGATTTGCACTCAACCATCCAGAGCTTGT...TGTCCAGGTAAAGTTGTTTTCAGCCTCATGTCTACTGTTAGGTGAGGGAGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CAA 90 bp CACTTCTTGTGGATATGTGGATGTCTGGTATCAGATACTGCAGCGACAGCAGTTACAAGCTCTGGATGGTaGAGTGCAAATCTGCTGAGG +
Preference number: 5 (lower is better)
Translates to: HFLWICGCLVSDTAATAVTSSGW*SANLLR
Trigger: CCTCAGCAGATTTGCACTCAACCATCCAGAGCTTGT...AACTGCTGTCGCTGCAGTATCTGATACCAGACATCCACATATCCACAAGAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp CACTTCTTGTGGATATGTGGATGTCTGGTATCAGATACTGCAGCGACAGCAGTTTGTCCACAACATTGGTaGTCAGGCCAGAGAGTTTGG +
Preference number: 5 (lower is better)
Translates to: HFLWICGCLVSDTAATAVCPQHW*SGQRVW
Trigger: CCAAACTCTCTGGCCTGACAACCAATGTTGTGGACA...AACTGCTGTCGCTGCAGTATCTGATACCAGACATCCACATATCCACAAGAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp GTGACTCCCTCACCTAACAGTAGACATGAGGCTGAAAACAACTTTACCTGGACAATGCATTCTGTAGGTTaGGATCAGGTCCAGGTTGGC +
Preference number: 5 (lower is better)
Translates to: VTPSPNSRHEAENNFTWTMHSVG*DQVQVG
Trigger: GCCAACCTGGACCTGATCCAAACCTACAGAATGCAT...TGTCCAGGTAAAGTTGTTTTCAGCCTCATGTCTACTGTTAGGTGAGGGAGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CAA 90 bp GACATGAGGCTGAAAACAACTTTACCTGGACAGGGCTACCCCTACAGATTGGCCGTCTTGGTTGATGTCTaGGGCAATATGCATTCTGTA +
Preference number: 5 (lower is better)
Translates to: DMRLKTTLPGQGYPYRLAVLVDV*GNMHSV
Trigger: TACAGAATGCATATTGCCCAAGACATCAACCAAGAC...GGCCAATCTGTAGGGGTAGCCCTGTCCAGGTAAAGTTGTTTTCAGCCTCATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CAA 90 bp CAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTATAAGAAGAGCTGCAGGTaGTCTTGGTTGATGTCTTGG +
Preference number: 5 (lower is better)
Translates to: QAPFCYWSQSINGPDGNYKKSCR*SWLMSW
Trigger: CCAAGACATCAACCAAGACAACCTGCAGCTCTTCTT...ATAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp GGTATCAGATACTGCAGCGACAGCAGTTTTGCTCTTCAGAGCAGAGGCCTGGCAGATCAGCTAAAGATGTaGGAATGTTACAGTATGGCA +
Preference number: 5 (lower is better)
Translates to: GIRYCSDSSFALQSRGLADQLKM*ECYSMA
Trigger: TGCCATACTGTAACATTCCAACATCTTTAGCTGATC...TGCCAGGCCTCTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp ACTCTATGTTGTATCAGAACCTCAGCGATGGTTCATGGGCTTCCAGCAGAATATCCAAGAGCTGGGCTCTaGCTATGTGGTAGTTGGTCT +
Preference number: 5 (lower is better)
Translates to: TLCCIRTSAMVHGLPAEYPRAGL*LCGSWS
Trigger: AGACCAACTACCACATAGCAAGAGCCCAGCTCTTGG...ATATTCTGCTGGAAGCCCATGAACCATCGCTGAGGTTCTGATACAACATAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CAA 90 bp ACTCTATGTTGTATCAGAACCTCAGCGATGGTTCATGGGCTTCCAGCAGAATATGCCCCTTCCCAAGATTaGGAACTGTGTAACCCTGAG +
Preference number: 5 (lower is better)
Translates to: TLCCIRTSAMVHGLPAEYAPSQD*ELCNPE
Trigger: CTCAGGGTTACACAGTTCCAAATCTTGGGAAGGGGC...ATATTCTGCTGGAAGCCCATGAACCATCGCTGAGGTTCTGATACAACATAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CAA 90 bp ACAGGCACCCTTCTGCTACTGGTCACAATCAATCAATGGTCCAGACGGCAATTAACTGGTCTGTTTCCTTaGGGTAAGCCTCTTATAGTG +
Preference number: 5 (lower is better)
Translates to: TGTLLLLVTINQWSRRQLTGLFP*GKPLIV
Trigger: CACTATAAGAGGCTTACCCAAAGGAAACAGACCAGT...TAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CAA 90 bp CGCACACACAGAGTCGGGATCAAAGAATCTTATCTGATACATAGTTGGGGGAGCATAATGTCCACAACATaGGTTGTCAGGCCAGAGAGT +
Preference number: 5 (lower is better)
Translates to: RTHRVGIKESYLIHSWGSIMSTT*VVRPES
Trigger: ACTCTCTGGCCTGACAACCAATGTTGTGGACATTAT...GCTCCCCCAACTATGTATCAGATAAGATTCTTTGATCCCGACTCTGTGTGTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp CACTTCTTGTGGATATGTGGATGTCTGGTATCAGATACTGCAGCGACAGCAGTTAAGAAGAGCTGCAGGTaGTCTTGGTTGATGTCTTGG +
Preference number: 5 (lower is better)
Translates to: HFLWICGCLVSDTAATAVKKSCR*SWLMSW
Trigger: CCAAGACATCAACCAAGACAACCTGCAGCTCTTCTT...AACTGCTGTCGCTGCAGTATCTGATACCAGACATCCACATATCCACAAGAAGTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp TGGACAGGGCTACCCCTACAGATTGGCCCTTTCTCTCCTACAAAAGGGAGTTCAGATCAGCTAAAGATGTaGGAATGTTACAGTATGGCA +
Preference number: 5 (lower is better)
Translates to: WTGLPLQIGPFSPTKGSSDQLKM*ECYSMA
Trigger: TGCCATACTGTAACATTCCAACATCTTTAGCTGATC...TGAACTCCCTTTTGTAGGAGAGAAAGGGCCAATCTGTAGGGGTAGCCCTGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CAA 90 bp GACATGAGGCTGAAAACAACTTTACCTGGACAGGGCTACCCCTACAGATTGGCCTATACAGAAATTCATTaGGACAGAAGGAGCCTCTCT +
Preference number: 5 (lower is better)
Translates to: DMRLKTTLPGQGYPYRLAYTEIH*DRRSLS
Trigger: AGAGAGGCTCCTTCTGTCCAAATGAATTTCTGTATA...GGCCAATCTGTAGGGGTAGCCCTGTCCAGGTAAAGTTGTTTTCAGCCTCATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS GCA 90 bp GGAGCTGATTCAGTTGTCAGGCCACTGCAGGGAGTAACGTGCTGTTaGTACCTTTTTGTCTTAGTCAATTATCATCTGTTTTACAGGCTC +
Preference number: 5 (lower is better)
Translates to: GADSVVRPLQGVTCC*YLFVLVNYHLFYRL
Trigger: GAGCCTGTAAAACAGATGATAATTGACTAAGACAAAAAGGTAGCAACAGCACGTTACTCCCTGCAGTGGCCTGACAACTGAATCAGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422536.2
CDS-3UTR CAA 90 bp CACTTCTTGTGGATATGTGGATGTCTGGTATCAGATACTGCAGCGACAGCAGTTACTGGTCTGTTTCCTTaGGGTAAGCCTCTTATAGTG +
Preference number: 5 (lower is better)
Translates to: HFLWICGCLVSDTAATAVTGLFP*GKPLIV
Trigger: CACTATAAGAGGCTTACCCAAAGGAAACAGACCAGT...AACTGCTGTCGCTGCAGTATCTGATACCAGACATCCACATATCCACAAGAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CAA 90 bp CACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGATCAGCTAAAGATGATAATGTCCACAACATaGGTTGTCAGGCCAGAGAGT +
Preference number: 5 (lower is better)
Translates to: HGKKLAREDMERSDQLKMIMSTT*VVRPES
Trigger: ACTCTCTGGCCTGACAACCAATGTTGTGGACATTAT...CATCTTTAGCTGATCAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp CGCACACACAGAGTCGGGATCAAAGAATCTTATCTGATACATAGTTGGGGGAGCGTCTTGGTTGATGTCTaGGGCAATATGCATTCTGTA +
Preference number: 5 (lower is better)
Translates to: RTHRVGIKESYLIHSWGSVLVDV*GNMHSV
Trigger: TACAGAATGCATATTGCCCAAGACATCAACCAAGAC...GCTCCCCCAACTATGTATCAGATAAGATTCTTTGATCCCGACTCTGTGTGTGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp CGCACACACAGAGTCGGGATCAAAGAATCTTATCTGATACATAGTTGGGGGAGCTTATGGAGTGGTCATTaGAAGGATGGACTTGCAATG +
Preference number: 5 (lower is better)
Translates to: RTHRVGIKESYLIHSWGSLWSGH*KDGLAM
Trigger: CATTGCAAGTCCATCCTTCAAATGACCACTCCATAA...GCTCCCCCAACTATGTATCAGATAAGATTCTTTGATCCCGACTCTGTGTGTGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp TTTGGACAGAAGGAGCCTCTCTATGTAACAGGCACCCTTCTGCTACTGGTCACAGATCAGCTAAAGATGTaGGAATGTTACAGTATGGCA +
Preference number: 5 (lower is better)
Translates to: FGQKEPLYVTGTLLLLVTDQLKM*ECYSMA
Trigger: TGCCATACTGTAACATTCCAACATCTTTAGCTGATC...TGTGACCAGTAGCAGAAGGGTGCCTGTTACATAGAGAGGCTCCTTCTGTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp TTTGGACAGAAGGAGCCTCTCTATGTAACAGGCACCCTTCTGCTACTGGTCACATATACAGAAATTCATTaGGACAGAAGGAGCCTCTCT +
Preference number: 5 (lower is better)
Translates to: FGQKEPLYVTGTLLLLVTYTEIH*DRRSLS
Trigger: AGAGAGGCTCCTTCTGTCCAAATGAATTTCTGTATA...TGTGACCAGTAGCAGAAGGGTGCCTGTTACATAGAGAGGCTCCTTCTGTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS TCA 90 bp CTGTTTCCTTTGGGTAAGCCTCTTATAGTGACGTGGACCACACCATaGGTTGTTTCTATATCATGTTCCTCCATGGTGATTGGCATGCAT +
Preference number: 5 (lower is better)
Translates to: LFPLGKPLIVTWTTP*VVSISCSSMVIGMH
Trigger: ATGCATGCCAATCACCATGGAGGAACATGATATAGAAACAACTCATGGTGTGGTCCACGTCACTATAAGAGGCTTACCCAAAGGAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422536.2
CDS CCA 90 bp GTTTACTGGATGAAATGTTATATTATGGAGTGGTCATTTGAAGGATaGACTTGCAATGGTCCAGGGGAGGAGCATCTGCTTAGCAGGACA +
Preference number: 5 (lower is better)
Translates to: VYWMKCYIMEWSFEG*TCNGPGEEHLLSRT
Trigger: TGTCCTGCTAAGCAGATGCTCCTCCCCTGGACCATTGCAAGTCCATCCTTCAAATGACCACTCCATAATATAACATTTCATCCAGTAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp ACTCTATGTTGTATCAGAACCTCAGCGATGGTTCATGGGCTTCCAGCAGAATATATAATGTCCACAACATaGGTTGTCAGGCCAGAGAGT +
Preference number: 5 (lower is better)
Translates to: TLCCIRTSAMVHGLPAEYIMSTT*VVRPES
Trigger: ACTCTCTGGCCTGACAACCAATGTTGTGGACATTAT...ATATTCTGCTGGAAGCCCATGAACCATCGCTGAGGTTCTGATACAACATAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp CACGGGAAAAAGCTGGCAAGAGAGGATATGGAGAGATCTGATCAGCTAAAGATGGTCTTGGTTGATGTCTaGGGCAATATGCATTCTGTA +
Preference number: 5 (lower is better)
Translates to: HGKKLAREDMERSDQLKMVLVDV*GNMHSV
Trigger: TACAGAATGCATATTGCCCAAGACATCAACCAAGAC...CATCTTTAGCTGATCAGATCTCTCCATATCCTCTCTTGCCAGCTTTTTCCCGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp CGCACACACAGAGTCGGGATCAAAGAATCTTATCTGATACATAGTTGGGGGAGCTATACAGAAATTCATTaGGACAGAAGGAGCCTCTCT +
Preference number: 5 (lower is better)
Translates to: RTHRVGIKESYLIHSWGSYTEIH*DRRSLS
Trigger: AGAGAGGCTCCTTCTGTCCAAATGAATTTCTGTATA...GCTCCCCCAACTATGTATCAGATAAGATTCTTTGATCCCGACTCTGTGTGTGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp ACTCTATGTTGTATCAGAACCTCAGCGATGGTTCATGGGCTTCCAGCAGAATATGGACCACACCATGAGTaGTTTCTATATCATGTTCCT +
Preference number: 5 (lower is better)
Translates to: TLCCIRTSAMVHGLPAEYGPHHE*FLYHVP
Trigger: AGGAACATGATATAGAAACAACTCATGGTGTGGTCC...ATATTCTGCTGGAAGCCCATGAACCATCGCTGAGGTTCTGATACAACATAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373803.6
CDS-3UTR CAA 90 bp CACTTCTTGTGGATATGTGGATGTCTGGTATCAGATACTGCAGCGACAGCAGTTGATCAGCTAAAGATGTaGGAATGTTACAGTATGGCA +
Preference number: 5 (lower is better)
Translates to: HFLWICGCLVSDTAATAVDQLKM*ECYSMA
Trigger: TGCCATACTGTAACATTCCAACATCTTTAGCTGATC...AACTGCTGTCGCTGCAGTATCTGATACCAGACATCCACATATCCACAAGAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS-3UTR CAA 90 bp AAGCTGCTCTCTCCTGAAATCACTTTGCAAATTTTGTTGACCAATTTGCAAACAACAAGCTCTGGATGGTaGAGTGCAAATCTGCTGAGG +
Preference number: 5 (lower is better)
Translates to: KLLSPEITLQILLTNLQTTSSGW*SANLLR
Trigger: CCTCAGCAGATTTGCACTCAACCATCCAGAGCTTGT...TGTTTGCAAATTGGTCAACAAAATTTGCAAAGTGATTTCAGGAGAGAGCAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS TCA 90 bp CTGTTTCCTTTGGGTAAGCCTCTTATAGTGACGTGGACCACACCATaGGTTGTTTCTATATCATGTTCCTTATCATTTAGAAGTGGTTTG +
Preference number: 5 (lower is better)
Translates to: LFPLGKPLIVTWTTP*VVSISCSLSFRSGL
Trigger: CAAACCACTTCTAAATGATAAGGAACATGATATAGAAACAACTCATGGTGTGGTCCACGTCACTATAAGAGGCTTACCCAAAGGAAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359675.6
CDS-3UTR CAA 90 bp AAGCTGCTCTCTCCTGAAATCACTTTGCAAATTTTGTTGACCAATTTGCAAACATTATGGAGTGGTCATTaGAAGGATGGACTTGCAATG +
Preference number: 5 (lower is better)
Translates to: KLLSPEITLQILLTNLQTLWSGH*KDGLAM
Trigger: CATTGCAAGTCCATCCTTCAAATGACCACTCCATAA...TGTTTGCAAATTGGTCAACAAAATTTGCAAAGTGATTTCAGGAGAGAGCAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS CCA 72 bp GGACTTTCTCCAGAGCCGAGGCTACTCGAGGTTGAGTaGGTTCGTGATCGGGCGAGCCGAGTCATGCTGGCA +
Preference number: 6 (lower is better)
Translates to: GLSPEPRLLEVE*VRDRASRVMLA
Trigger: TGCCAGCATGACTCGGCTCGCCCGATCACGAACCCACTCAACCTCGAGTAGCCTCGGCTCTGGAGAAAGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS CCA 72 bp CCAGGGGAGGAGCATCTGCTTAGCAGGACACCTCCATaGTCTGGTGTCTGTCCAGGACATCAGGGGACTCAC +
Preference number: 6 (lower is better)
Translates to: PGEEHLLSRTPP*SGVCPGHQGTH
Trigger: GTGAGTCCCCTGATGTCCTGGACAGACACCAGACCATGGAGGTGTCCTGCTAAGCAGATGCTCCTCCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS TCA 72 bp TGCTGGCAGATGGTACTGACTCGGTGCTCAGGTGACTaGGCTGCACATACGGGATGTAGCCCATTCCCTGCA +
Preference number: 6 (lower is better)
Translates to: CWQMVLTRCSGD*AAHTGCSPFPA
Trigger: TGCAGGGAATGGGCTACATCCCGTATGTGCAGCTCAGTCACCTGAGCACCGAGTCAGTACCATCTGCCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373803.6
CDS GCA 72 bp AGGTTGAGTGGGTTCGTGATCGGGCGAGCCGAGTCATaGTGGCAGATGGTATGTAGCCCATTCCCTGCAAAA +
Preference number: 6 (lower is better)
Translates to: RLSGFVIGRAES*WQMVCSPFPAK
Trigger: TTTTGCAGGGAATGGGCTACATACCATCTGCCAGCATGACTCGGCTCGCCCGATCACGAACCCACTCAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
CDS CCA 72 bp TTGAGTGGGTTCGTGATCGGGCGAGCCGAGTCATGCTaGCAGATGGTATGTAGCCCATTCCCTGCAAAAAGT +
Preference number: 6 (lower is better)
Translates to: LSGFVIGRAESC*QMVCSPFPAKS
Trigger: ACTTTTTGCAGGGAATGGGCTACATACCATCTGCCAGCATGACTCGGCTCGCCCGATCACGAACCCACTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
CDS TCA 72 bp GACATCAGGGGACTCACAGGATTCTTGAGTTCCATCTaGCTGATTGCTGGTGACAGACCGGCTGAAGGGACT +
Preference number: 6 (lower is better)
Translates to: DIRGLTGFLSSI*LIAGDRPAEGT
Trigger: AGTCCCTTCAGCCGGTCTGTCACCAGCAATCAGTCAGATGGAACTCAAGAATCCTGTGAGTCCCCTGATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS TCA 72 bp CTGAAGATGAATGTGCAGAGACCCTGGCTAAGGAGCTaGTTCAGTTGTCAGGCCACTGCAGGGAGTAACGTG +
Preference number: 6 (lower is better)
Translates to: LKMNVQRPWLRS*FSCQATAGSNV
Trigger: CACGTTACTCCCTGCAGTGGCCTGACAACTGAATCAGCTCCTTAGCCAGGGTCTCTGCACATTCATCTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422536.2
CDS CCA 72 bp CAATATGCATTCTGTAGGTTTGGATCAGGTCCAGGTTaGCCTGTAACTCTTCCTGCCCAAAGTGATGAGCCA +
Preference number: 6 (lower is better)
Translates to: QYAFCRFGSGPG*PVTLPAQSDEP
Trigger: TGGCTCATCACTTTGGGCAGGAAGAGTTACAGGCCAACCTGGACCTGATCCAAACCTACAGAATGCATATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS GCA 72 bp TGTTATATTATGGAGTGGTCATTTGAAGGATGGACTTaGAATGGTCCAGGGGAGGAGCATCTGCTTAGCAGG +
Preference number: 6 (lower is better)
Translates to: CYIMEWSFEGWT*NGPGEEHLLSR
Trigger: CCTGCTAAGCAGATGCTCCTCCCCTGGACCATTGCAAGTCCATCCTTCAAATGACCACTCCATAATATAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS CAA 90 bp GTCTCTGCGTCCATTGTAGGAATTCAAGAAGAGCTGCAGGTTGTCTaGGTTGATGTCTTGGGCAATATGCATTCTGTAGGTTTGGATCAG +
Preference number: 6 (lower is better)
Translates to: VSASIVGIQEELQVV*VDVLGNMHSVGLDQ
Trigger: CTGATCCAAACCTACAGAATGCATATTGCCCAAGACATCAACCAAGACAACCTGCAGCTCTTCTTGAATTCCTACAATGGACGCAGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS GCA 72 bp GCTGATTCAGTTGTCAGGCCACTGCAGGGAGTAACGTaGTGTTGCTACCTTTTTGTCTTAGTCAATTATCAT +
Preference number: 6 (lower is better)
Translates to: ADSVVRPLQGVT*CCYLFVLVNYH
Trigger: ATGATAATTGACTAAGACAAAAAGGTAGCAACAGCACGTTACTCCCTGCAGTGGCCTGACAACTGAATCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422536.2
CDS TCA 72 bp TTGGGTAAGCCTCTTATAGTGACGTGGACCACACCATaGGTTGTTTCTATATCATGTTCCTCCATGGTGATT +
Preference number: 6 (lower is better)
Translates to: LGKPLIVTWTTP*VVSISCSSMVI
Trigger: AATCACCATGGAGGAACATGATATAGAAACAACTCATGGTGTGGTCCACGTCACTATAAGAGGCTTACCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422536.2
CDS CCA 72 bp TTAATGTTTTTGATTTGTTATCATTTTGGCCCAGTATaGGTCTTTCGATCTCCAGGTCTCTGCGTCCATTGT +
Preference number: 6 (lower is better)
Translates to: LMFLICYHFGPV*VFRSPGLCVHC
Trigger: ACAATGGACGCAGAGACCTGGAGATCGAAAGACCCATACTGGGCCAAAATGATAACAAATCAAAAACATTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349004.6
ENST00000359675.6
ENST00000373773.7
ENST00000373803.6
CDS TCA 72 bp TTGGGTAAGCCTCTTATAGTGACGTGGACCACACCATaGGTTGTTTCTATATCATGTTCCTTATCATTTAGA +
Preference number: 6 (lower is better)
Translates to: LGKPLIVTWTTP*VVSISCSLSFR
Trigger: TCTAAATGATAAGGAACATGATATAGAAACAACTCATGGTGTGGTCCACGTCACTATAAGAGGCTTACCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359675.6