RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NDEL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000166579

Ensembl transcript IDs: ENST00000334527.12, ENST00000380025.8, ENST00000402554.7, ENST00000578172.1, ENST00000579150.1, ENST00000580012.1, ENST00000580237.5, ENST00000581679.1, ENST00000582277.5, ENST00000582490.5, ENST00000582812.5, ENST00000583066.5, ENST00000583683.1, ENST00000584866.1

Found 314 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCCGCCGCTGTTCAGTCCACCCCGGAGCTGGCACCGGCCCACCCTaGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTG +
Preference number: 1 (lower is better)
Translates to: SRRCSVHPGAGTGPP*NQPLTLPNTTGRPL
Trigger: CAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTGAACAGCGGCGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR CCA 90 bp CCTGACTCTTTGCCAGAAACAGGCCCAAACTGTGAGGGGTGGAGTTaGGGGACACATGATCATGAGCACTGGAGATGCCTGGGTGGGAGC +
Preference number: 1 (lower is better)
Translates to: PDSLPETGPNCEGWS*GTHDHEHWRCLGGS
Trigger: GCTCCCACCCAGGCATCTCCAGTGCTCATGATCATGTGTCCCCCAACTCCACCCCTCACAGTTTGGGCCTGTTTCTGGCAAAGAGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
3UTR CCA 90 bp AACCTTCCTGACTCTTTGCCAGAAACAGGCCCAAACTGTGAGGGGTaGAGTTGGGGGACACATGATCATGAGCACTGGAGATGCCTGGGT +
Preference number: 1 (lower is better)
Translates to: NLPDSLPETGPNCEG*SWGTHDHEHWRCLG
Trigger: ACCCAGGCATCTCCAGTGCTCATGATCATGTGTCCCCCAACTCCACCCCTCACAGTTTGGGCCTGTTTCTGGCAAAGAGTCAGGAAGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
3UTR-3UTR GCA 90 bp AGCCGCCGCTGTTCAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGAACCAGGCCCTCTGCCAGCCGTaGGGAGGCAGACGGAGGGGC +
Preference number: 2 (lower is better)
Translates to: SRRCSVHPGAGTGPPWNQALCQP*GGRRRG
Trigger: GCCCCTCCGTCTGCCTCCGCACGGCTGGCAGAGGGC...CTGGTTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTGAACAGCGGCGGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR TCA 90 bp ATGCAGCCTGCCCTCTGCCAGCCGTGCGGAGGCAGACGGAGGGGCACGGGGCTGCAGCATACCCGGCGCTaGCGATGGACGCGAGGAGCC +
Preference number: 2 (lower is better)
Translates to: MQPALCQPCGGRRRGTGLQHTRR*RWTRGA
Trigger: GGCTCCTCGCGTCCATCGTCAGCGCCGGGTATGCTG...CAGCCCCGTGCCCCTCCGTCTGCCTCCGCACGGCTGGCAGAGGGCAGGCTGCAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380025.8
ENST00000402554.7
3UTR-3UTR GCA 90 bp AAGGATGCACAGGGACAGCCGCCGCTGTTCAGTCCACCCCGGAGCTGGCACCGGGCCCTCTGCCAGCCGTaGGGAGGCAGACGGAGGGGC +
Preference number: 2 (lower is better)
Translates to: KDAQGQPPLFSPPRSWHRALCQP*GGRRRG
Trigger: GCCCCTCCGTCTGCCTCCGCACGGCTGGCAGAGGGC...CCGGTGCCAGCTCCGGGGTGGACTGAACAGCGGCGGCTGTCCCTGTGCATCCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR GCA 90 bp CAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGAACCAGCCACTCACCCTTCCCACTGCATGCAGCCTaGCCTCTGCCAGCCGTGCGG +
Preference number: 2 (lower is better)
Translates to: QSTPELAPAHPGTSHSPFPLHAA*PLPAVR
Trigger: CCGCACGGCTGGCAGAGGGCAGGCTGCATGCAGTGG...GAAGGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR GCA 90 bp AAGGATGCACAGGGACAGCCGCCGCTGTTCAGTCCACCCCGGAGCTGGCACCGGAGGCTGGCGAGAGGCTaGCCGCCTCCCTCACCCCGA +
Preference number: 2 (lower is better)
Translates to: KDAQGQPPLFSPPRSWHRRLARG*PPPSPR
Trigger: TCGGGGTGAGGGAGGCGGGCAGCCTCTCGCCAGCCT...CCGGTGCCAGCTCCGGGGTGGACTGAACAGCGGCGGCTGTCCCTGTGCATCCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR GCA 90 bp GTTCAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGAACCAGCCACTCACCCATGCAGCCTGCCCTCTaGCAGCCGTGCGGAGGCAGA +
Preference number: 2 (lower is better)
Translates to: VQSTPELAPAHPGTSHSPMQPAL*QPCGGR
Trigger: TCTGCCTCCGCACGGCTGGCAGAGGGCAGGCTGCAT...GGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTGAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR GCA 90 bp CAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGAACCAGCCACTCACCCTTCCCCAGTAGCCGCCACTaGATGCAGCCTGCCCTCTGC +
Preference number: 2 (lower is better)
Translates to: QSTPELAPAHPGTSHSPFPSSRH*MQPALC
Trigger: GCAGAGGGCAGGCTGCATGCAGTGGCGGCTACTGGG...GAAGGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR CCA 90 bp GTTCAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGAACCAGCCACTCACCCGGTGTCCTGGGTTGTTaGAGGAGGGCAGGAGCCCCC +
Preference number: 2 (lower is better)
Translates to: VQSTPELAPAHPGTSHSPGVLGC*RRAGAP
Trigger: GGGGGCTCCTGCCCTCCTCCAACAACCCAGGACACC...GGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTGAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR CCA 90 bp AGCCGCCGCTGTTCAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGAACCAGAGACAGCACAGAGGCTaGGCCTGTGTGTGCCCCGTC +
Preference number: 2 (lower is better)
Translates to: SRRCSVHPGAGTGPPWNQRQHRG*ACVCPV
Trigger: GACGGGGCACACACAGGCCCAGCCTCTGTGCTGTCT...CTGGTTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTGAACAGCGGCGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR TCA 90 bp GATGTCGTTGAACTGAAGGACGGGAAGGCTGGCGAGAGGCTGCCCGCCTCCCTCCCAGGCACCGAGGGGTaGGGCGTGGGTGTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: DVVELKDGKAGERLPASLPGTEG*GVGVLG
Trigger: ACCCAGGACACCCACGCCTCACCCCTCGGTGCCTGG...GAGGGAGGCGGGCAGCCTCTCGCCAGCCTTCCCGTCCTTCAGTTCAACGACATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR GCA 90 bp GCACCGGCCCACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCCCACTGCATGCAGCCTaGCCTCTGCCAGCCGTGCGG +
Preference number: 2 (lower is better)
Translates to: APAHPGTSHSPFLTQRDGPLHAA*PLPAVR
Trigger: CCGCACGGCTGGCAGAGGGCAGGCTGCATGCAGTGG...GCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR CCA 90 bp GTTCAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGAACCAGCCACTCACCCAGACAGCACAGAGGCTaGGCCTGTGTGTGCCCCGTC +
Preference number: 2 (lower is better)
Translates to: VQSTPELAPAHPGTSHSPRQHRG*ACVCPV
Trigger: GACGGGGCACACACAGGCCCAGCCTCTGTGCTGTCT...GGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR TCA 90 bp GATGTCGTTGAACTGAAGGACGGGAAGGCTGGCGAGAGGCTGCCCGCCTCCCTCCCCTCACCCCGAGTCTaGGGCGCACGGAGGAGGAGA +
Preference number: 2 (lower is better)
Translates to: DVVELKDGKAGERLPASLPSPRV*GARRRR
Trigger: TCTCCTCCTCCGTGCGCCTCAGACTCGGGGTGAGGG...GAGGGAGGCGGGCAGCCTCTCGCCAGCCTTCCCGTCCTTCAGTTCAACGACATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR TCA 90 bp GATGTCGTTGAACTGAAGGACGGGAAGGCTGGCGAGAGGCTGCCCGCCTCCCTCCAGCATACCCGGCGCTaGCGATGGACGCGAGGAGCC +
Preference number: 2 (lower is better)
Translates to: DVVELKDGKAGERLPASLQHTRR*RWTRGA
Trigger: GGCTCCTCGCGTCCATCGTCAGCGCCGGGTATGCTG...GAGGGAGGCGGGCAGCCTCTCGCCAGCCTTCCCGTCCTTCAGTTCAACGACATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380025.8
3UTR-3UTR GCA 90 bp GGCCCACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGGCTGGGCCTGTGTGTaGCCCGTCCCAGAGGCTCCT +
Preference number: 2 (lower is better)
Translates to: GPPWNQPLTLPNTTGRPLGWACV*PVPEAP
Trigger: AGGAGCCTCTGGGACGGGGCACACACAGGCCCAGCC...CAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR GCA 90 bp CCACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAAAGGCTGGCGAGAGGCTaGCCGCCTCCCTCACCCCGA +
Preference number: 2 (lower is better)
Translates to: PPWNQPLTLPNTTGRPLERLARG*PPPSPR
Trigger: TCGGGGTGAGGGAGGCGGGCAGCCTCTCGCCAGCCT...TTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR GCA 90 bp AGGGACAGCCGCCGCTGTTCAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGAGAGTAATCAAAGGATaGACAGGGACAGCCGCCGCT +
Preference number: 2 (lower is better)
Translates to: RDSRRCSVHPGAGTGPPWRVIKG*TGTAAA
Trigger: AGCGGCGGCTGTCCCTGTGCATCCTTTGATTACTCT...CCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTGAACAGCGGCGGCTGTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR TCA 90 bp GTTCAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGAACCAGCCACTCACCCAAGATGTCGTTGAACTaGAGGACGGGAAGGCTGGCG +
Preference number: 2 (lower is better)
Translates to: VQSTPELAPAHPGTSHSPKMSLN*RTGRLA
Trigger: CGCCAGCCTTCCCGTCCTTCAGTTCAACGACATCTT...GGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR CCA 90 bp AGGGCAGGAGCCCCCACCTGGAGGCTAGGCACTCACACACTGAGAGGCAGCATAGGTGTCCTGGGTTGTTaGAGGAGGGCAGGAGCCCCC +
Preference number: 2 (lower is better)
Translates to: RAGAPTWRLGTHTLRGSIGVLGC*RRAGAP
Trigger: GGGGGCTCCTGCCCTCCTCCAACAACCCAGGACACC...TATGCTGCCTCTCAGTGTGTGAGTGCCTAGCCTCCAGGTGGGGGCTCCTGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380025.8
ENST00000402554.7
3UTR-3UTR CCA 90 bp GGCCCACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGAGCACTGGAGATGCCTaGGTGGGAGCTCAGGAGGGC +
Preference number: 2 (lower is better)
Translates to: GPPWNQPLTLPNTTGRPLSTGDA*VGAQEG
Trigger: GCCCTCCTGAGCTCCCACCCAGGCATCTCCAGTGCT...CAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR CCA 90 bp CAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGAACCAGCCACTCACCCTTCCATGATCATGAGCACTaGAGATGCCTGGGTGGGAGC +
Preference number: 2 (lower is better)
Translates to: QSTPELAPAHPGTSHSPFHDHEH*RCLGGS
Trigger: GCTCCCACCCAGGCATCTCCAGTGCTCATGATCATG...GAAGGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR CCA 90 bp CACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAAGGAAGGACGGGAAGGCTaGCGAGAGGCTGCCCGCCTC +
Preference number: 2 (lower is better)
Translates to: HPGTSHSPFLTQRDGPWKEGREG*REAARL
Trigger: GAGGCGGGCAGCCTCTCGCCAGCCTTCCCGTCCTTC...CTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR GCA 90 bp AGGGACAGCCGCCGCTGTTCAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGACCTTCCTGACTCTTTaGCAGAAACAGGCCCAAACT +
Preference number: 2 (lower is better)
Translates to: RDSRRCSVHPGAGTGPPWTFLTL*QKQAQT
Trigger: AGTTTGGGCCTGTTTCTGGCAAAGAGTCAGGAAGGT...CCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTGAACAGCGGCGGCTGTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR TCA 90 bp GGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAAGAGAAAACCAGGCACCGAGGGGTaGGGCGTGGGTGTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: GTSHSPFLTQRDGPWKRKPGTEG*GVGVLG
Trigger: ACCCAGGACACCCACGCCTCACCCCTCGGTGCCTGG...TTTTCTCTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR TCA 90 bp GCACCGGCCCACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCAAGATGTCGTTGAACTaGAGGACGGGAAGGCTGGCG +
Preference number: 2 (lower is better)
Translates to: APAHPGTSHSPFLTQRDGKMSLN*RTGRLA
Trigger: CGCCAGCCTTCCCGTCCTTCAGTTCAACGACATCTT...GCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR GCA 90 bp GGCCCACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGCATGAGCACTGGAGATaGCTGGGTGGGAGCTCAGGA +
Preference number: 2 (lower is better)
Translates to: GPPWNQPLTLPNTTGRPLHEHWR*LGGSSG
Trigger: TCCTGAGCTCCCACCCAGGCATCTCCAGTGCTCATG...CAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR CCA 90 bp AAGGATGCACAGGGACAGCCGCCGCTGTTCAGTCCACCCCGGAGCTGGCACCGGCCAAACTGTGAGGGGTaGAGTTGGGGGACACATGAT +
Preference number: 2 (lower is better)
Translates to: KDAQGQPPLFSPPRSWHRPNCEG*SWGTHD
Trigger: ATCATGTGTCCCCCAACTCCACCCCTCACAGTTTGG...CCGGTGCCAGCTCCGGGGTGGACTGAACAGCGGCGGCTGTCCCTGTGCATCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR CCA 90 bp AGCCGCCGCTGTTCAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGAACCAGTGGGAGGCAAGTCCATaGAATGGTAGCTGCTTAAGT +
Preference number: 2 (lower is better)
Translates to: SRRCSVHPGAGTGPPWNQWEASP*NGSCLS
Trigger: ACTTAAGCAGCTACCATTCCATGGACTTGCCTCCCA...CTGGTTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTGAACAGCGGCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR CCA 90 bp CACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAAGGCAGGAGCCCCCACCTaGAGGCTAGGCACTCACACA +
Preference number: 2 (lower is better)
Translates to: HPGTSHSPFLTQRDGPWKAGAPT*RLGTHT
Trigger: TGTGTGAGTGCCTAGCCTCCAGGTGGGGGCTCCTGC...CTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380025.8
3UTR-3UTR TCA 90 bp GCACCGGCCCACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCCTCCAAAGATGTCGTTaGACTGAAGGACGGGAAGGC +
Preference number: 2 (lower is better)
Translates to: APAHPGTSHSPFLTQRDGLQRCR*TEGREG
Trigger: GCCTTCCCGTCCTTCAGTTCAACGACATCTTTGGAG...GCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR GCA 90 bp TTCCTGACTCTTTGCCAGAAACAGGCCCAAACTGTGAGGGGTGGAGTTGGGGGACCACTGCATGCAGCCTaGCCTCTGCCAGCCGTGCGG +
Preference number: 2 (lower is better)
Translates to: FLTLCQKQAQTVRGGVGGPLHAA*PLPAVR
Trigger: CCGCACGGCTGGCAGAGGGCAGGCTGCATGCAGTGG...TCCCCCAACTCCACCCCTCACAGTTTGGGCCTGTTTCTGGCAAAGAGTCAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
3UTR-3UTR GCA 90 bp AGCCGCCGCTGTTCAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGAACCAGTGCGACCCACAAAAGTaGAATCATGTGAAACCAACG +
Preference number: 2 (lower is better)
Translates to: SRRCSVHPGAGTGPPWNQCDPQK*NHVKPT
Trigger: CGTTGGTTTCACATGATTGCACTTTTGTGGGTCGCA...CTGGTTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTGAACAGCGGCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR CCA 90 bp GTTCAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGAACCAGCCACTCACCCTGGGAGGCAAGTCCATaGAATGGTAGCTGCTTAAGT +
Preference number: 2 (lower is better)
Translates to: VQSTPELAPAHPGTSHSPWEASP*NGSCLS
Trigger: ACTTAAGCAGCTACCATTCCATGGACTTGCCTCCCA...GGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR CCA 90 bp GCACCGGCCCACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCGGCATTGTGCTGCTCTaGGAGGCAAGTCCATGGAAT +
Preference number: 2 (lower is better)
Translates to: APAHPGTSHSPFLTQRDGGIVLL*EASPWN
Trigger: ATTCCATGGACTTGCCTCCCAGAGCAGCACAATGCC...GCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR GCA 90 bp TTCCTGACTCTTTGCCAGAAACAGGCCCAAACTGTGAGGGGTGGAGTTGGGGGAATGCAGCCTGCCCTCTaGCAGCCGTGCGGAGGCAGA +
Preference number: 2 (lower is better)
Translates to: FLTLCQKQAQTVRGGVGGMQPAL*QPCGGR
Trigger: TCTGCCTCCGCACGGCTGGCAGAGGGCAGGCTGCAT...TCCCCCAACTCCACCCCTCACAGTTTGGGCCTGTTTCTGGCAAAGAGTCAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
3UTR-3UTR GCA 90 bp TTCCTGACTCTTTGCCAGAAACAGGCCCAAACTGTGAGGGGTGGAGTTGGGGGACCCAGTAGCCGCCACTaGATGCAGCCTGCCCTCTGC +
Preference number: 2 (lower is better)
Translates to: FLTLCQKQAQTVRGGVGGPSSRH*MQPALC
Trigger: GCAGAGGGCAGGCTGCATGCAGTGGCGGCTACTGGG...TCCCCCAACTCCACCCCTCACAGTTTGGGCCTGTTTCTGGCAAAGAGTCAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
3UTR-3UTR GCA 90 bp CACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAAGCTCAGACGGGCATTGTaGTGCTCTGGGAGGCAAGTC +
Preference number: 2 (lower is better)
Translates to: HPGTSHSPFLTQRDGPWKLRRAL*CSGRQV
Trigger: GACTTGCCTCCCAGAGCAGCACAATGCCCGTCTGAG...CTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR CCA 90 bp GGAGCTGGCACCGGCCCACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGGCATTGTGCTGCTCTaGGAGGCAAGTCCATGGAAT +
Preference number: 2 (lower is better)
Translates to: GAGTGPPWNQPLTLPNTTGIVLL*EASPWN
Trigger: ATTCCATGGACTTGCCTCCCAGAGCAGCACAATGCC...CGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGCCAGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR CCA 90 bp TTCCTGACTCTTTGCCAGAAACAGGCCCAAACTGTGAGGGGTGGAGTTGGGGGACTGGAGATGCCTGGGTaGGAGCTCAGGAGGGCACAC +
Preference number: 2 (lower is better)
Translates to: FLTLCQKQAQTVRGGVGGLEMPG*ELRRAH
Trigger: GTGTGCCCTCCTGAGCTCCCACCCAGGCATCTCCAG...TCCCCCAACTCCACCCCTCACAGTTTGGGCCTGTTTCTGGCAAAGAGTCAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
3UTR-3UTR CCA 90 bp TTCCTGACTCTTTGCCAGAAACAGGCCCAAACTGTGAGGGGTGGAGTTGGGGGAAGCACTGGAGATGCCTaGGTGGGAGCTCAGGAGGGC +
Preference number: 2 (lower is better)
Translates to: FLTLCQKQAQTVRGGVGGSTGDA*VGAQEG
Trigger: GCCCTCCTGAGCTCCCACCCAGGCATCTCCAGTGCT...TCCCCCAACTCCACCCCTCACAGTTTGGGCCTGTTTCTGGCAAAGAGTCAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
3UTR-3UTR CCA 90 bp CAAAAACACTCCAAAGATGTCGTTGAACTGAAGGACGGGAAGGCTGGCGAGAGGGAAGGACGGGAAGGCTaGCGAGAGGCTGCCCGCCTC +
Preference number: 2 (lower is better)
Translates to: QKHSKDVVELKDGKAGEREGREG*REAARL
Trigger: GAGGCGGGCAGCCTCTCGCCAGCCTTCCCGTCCTTC...CCTCTCGCCAGCCTTCCCGTCCTTCAGTTCAACGACATCTTTGGAGTGTTTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR CCA 90 bp TTCCTGACTCTTTGCCAGAAACAGGCCCAAACTGTGAGGGGTGGAGTTGGGGGAGCAGGAGCCCCCACCTaGAGGCTAGGCACTCACACA +
Preference number: 2 (lower is better)
Translates to: FLTLCQKQAQTVRGGVGGAGAPT*RLGTHT
Trigger: TGTGTGAGTGCCTAGCCTCCAGGTGGGGGCTCCTGC...TCCCCCAACTCCACCCCTCACAGTTTGGGCCTGTTTCTGGCAAAGAGTCAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000380025.8
ENST00000402554.7
3UTR-3UTR GCA 90 bp CAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAAGAGAAAACAAAAATGCAGCCTGCCCTCTaGCAGCCGTGCGGAGGCAGA +
Preference number: 2 (lower is better)
Translates to: QPLTLPNTTGRPLEEKTKMQPAL*QPCGGR
Trigger: TCTGCCTCCGCACGGCTGGCAGAGGGCAGGCTGCAT...TTTTGTTTTCTCTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR GCA 90 bp AAGGATGCACAGGGACAGCCGCCGCTGTTCAGTCCACCCCGGAGCTGGCACCGGACGTATGTATCACCTTaGGACCCACAAAAGTGCAAT +
Preference number: 2 (lower is better)
Translates to: KDAQGQPPLFSPPRSWHRTYVSP*DPQKCN
Trigger: ATTGCACTTTTGTGGGTCGCAAGGTGATACATACGT...CCGGTGCCAGCTCCGGGGTGGACTGAACAGCGGCGGCTGTCCCTGTGCATCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR GCA 90 bp GGCCCACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGACCTTCCTGACTCTTTaGCAGAAACAGGCCCAAACT +
Preference number: 2 (lower is better)
Translates to: GPPWNQPLTLPNTTGRPLTFLTL*QKQAQT
Trigger: AGTTTGGGCCTGTTTCTGGCAAAGAGTCAGGAAGGT...CAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR CCA 90 bp CAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAAGAGAAAACAAAAGGTGTCCTGGGTTGTTaGAGGAGGGCAGGAGCCCCC +
Preference number: 2 (lower is better)
Translates to: QPLTLPNTTGRPLEEKTKGVLGC*RRAGAP
Trigger: GGGGGCTCCTGCCCTCCTCCAACAACCCAGGACACC...TTTTGTTTTCTCTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR CCA 90 bp CACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAAGTGTGAGGGGTGGAGTTaGGGGACACATGATCATGAG +
Preference number: 2 (lower is better)
Translates to: HPGTSHSPFLTQRDGPWKCEGWS*GTHDHE
Trigger: CTCATGATCATGTGTCCCCCAACTCCACCCCTCACA...CTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR CCA 90 bp CCACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAACCAAACTGTGAGGGGTaGAGTTGGGGGACACATGAT +
Preference number: 2 (lower is better)
Translates to: PPWNQPLTLPNTTGRPLEPNCEG*SWGTHD
Trigger: ATCATGTGTCCCCCAACTCCACCCCTCACAGTTTGG...TTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR TCA 90 bp ACCCTTCCTAACACAACGGGACGGCCCTTGGAAGAGAAAACAAAAACACTCCAACCCTCACCCCGAGTCTaGGGCGCACGGAGGAGGAGA +
Preference number: 2 (lower is better)
Translates to: TLPNTTGRPLEEKTKTLQPSPRV*GARRRR
Trigger: TCTCCTCCTCCGTGCGCCTCAGACTCGGGGTGAGGG...TTGGAGTGTTTTTGTTTTCTCTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR GCA 90 bp GGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAAGAGAAAACATGAGCACTGGAGATaGCTGGGTGGGAGCTCAGGA +
Preference number: 2 (lower is better)
Translates to: GTSHSPFLTQRDGPWKRKHEHWR*LGGSSG
Trigger: TCCTGAGCTCCCACCCAGGCATCTCCAGTGCTCATG...TTTTCTCTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR GCA 90 bp TTCCTGACTCTTTGCCAGAAACAGGCCCAAACTGTGAGGGGTGGAGTTGGGGGACATGAGCACTGGAGATaGCTGGGTGGGAGCTCAGGA +
Preference number: 2 (lower is better)
Translates to: FLTLCQKQAQTVRGGVGGHEHWR*LGGSSG
Trigger: TCCTGAGCTCCCACCCAGGCATCTCCAGTGCTCATG...TCCCCCAACTCCACCCCTCACAGTTTGGGCCTGTTTCTGGCAAAGAGTCAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
3UTR-3UTR GCA 90 bp GGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAAGAGAAAACTCAGACGGGCATTGTaGTGCTCTGGGAGGCAAGTC +
Preference number: 2 (lower is better)
Translates to: GTSHSPFLTQRDGPWKRKLRRAL*CSGRQV
Trigger: GACTTGCCTCCCAGAGCAGCACAATGCCCGTCTGAG...TTTTCTCTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR TCA 90 bp CACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAAGAAAAGTGCAATCATGTaGAACCAACGGCACTACGGC +
Preference number: 2 (lower is better)
Translates to: HPGTSHSPFLTQRDGPWKKSAIM*NQRHYG
Trigger: GCCGTAGTGCCGTTGGTTTCACATGATTGCACTTTT...CTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR CCA 90 bp AGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAAGAGAAAACAAAAACTGGAGATGCCTGGGTaGGAGCTCAGGAGGGCACAC +
Preference number: 2 (lower is better)
Translates to: SHSPFLTQRDGPWKRKQKLEMPG*ELRRAH
Trigger: GTGTGCCCTCCTGAGCTCCCACCCAGGCATCTCCAG...TTTTTGTTTTCTCTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR CCA 90 bp AGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAAGAGAAAACAAAAAAGCACTGGAGATGCCTaGGTGGGAGCTCAGGAGGGC +
Preference number: 2 (lower is better)
Translates to: SHSPFLTQRDGPWKRKQKSTGDA*VGAQEG
Trigger: GCCCTCCTGAGCTCCCACCCAGGCATCTCCAGTGCT...TTTTTGTTTTCTCTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR CCA 90 bp TTCCTGACTCTTTGCCAGAAACAGGCCCAAACTGTGAGGGGTGGAGTTGGGGGACATGATCATGAGCACTaGAGATGCCTGGGTGGGAGC +
Preference number: 2 (lower is better)
Translates to: FLTLCQKQAQTVRGGVGGHDHEH*RCLGGS
Trigger: GCTCCCACCCAGGCATCTCCAGTGCTCATGATCATG...TCCCCCAACTCCACCCCTCACAGTTTGGGCCTGTTTCTGGCAAAGAGTCAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
3UTR-3UTR GCA 90 bp CCACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAATGCGACCCACAAAAGTaGAATCATGTGAAACCAACG +
Preference number: 2 (lower is better)
Translates to: PPWNQPLTLPNTTGRPLECDPQK*NHVKPT
Trigger: CGTTGGTTTCACATGATTGCACTTTTGTGGGTCGCA...TTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR TCA 90 bp ACCCTTCCTAACACAACGGGACGGCCCTTGGAAGAGAAAACAAAAACACTCCAAAACAGGCCCAAACTGTaGGGGGTGGAGTTGGGGGAC +
Preference number: 2 (lower is better)
Translates to: TLPNTTGRPLEEKTKTLQNRPKL*GVELGD
Trigger: GTCCCCCAACTCCACCCCTCACAGTTTGGGCCTGTT...TTGGAGTGTTTTTGTTTTCTCTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR TCA 90 bp GGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAAGAGAAAAAAAAGTGCAATCATGTaGAACCAACGGCACTACGGC +
Preference number: 2 (lower is better)
Translates to: GTSHSPFLTQRDGPWKRKKSAIM*NQRHYG
Trigger: GCCGTAGTGCCGTTGGTTTCACATGATTGCACTTTT...TTTTCTCTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCC
52% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR CCA 90 bp CAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAAGAGAAAACAAAATGTGAGGGGTGGAGTTaGGGGACACATGATCATGAG +
Preference number: 2 (lower is better)
Translates to: QPLTLPNTTGRPLEEKTKCEGWS*GTHDHE
Trigger: CTCATGATCATGTGTCCCCCAACTCCACCCCTCACA...TTTTGTTTTCTCTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR GCA 90 bp TTAATGAAATGTATATTCTCCAGGGTAAAATCAGGGACAGAGATCAACCAAAACAGAGCCTATTCAGAGTaGACCGTGTGTCGAATCTGC +
Preference number: 2 (lower is better)
Translates to: LMKCIFSRVKSGTEINQNRAYSE*TVCRIC
Trigger: GCAGATTCGACACACGGTGCACTCTGAATAGGCTCT...GTTTTGGTTGATCTCTGTCCCTGATTTTACCCTGGAGAATATACATTTCATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582277.5
3UTR CCA 72 bp CAGGGACAGCCGCCGCTGTTCAGTCCACCCCGGAGCTaGCACCGGCCCACCCTGGAACCAGCCACTCACCCT +
Preference number: 3 (lower is better)
Translates to: QGQPPLFSPPRS*HRPTLEPATHP
Trigger: AGGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTGAACAGCGGCGGCTGTCCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR CAA 90 bp CAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGAACCAGCCACTCACCCTTCGGGCTCAGACGGGCATaGTGCTGCTCTGGGAGGCAA +
Preference number: 3 (lower is better)
Translates to: QSTPELAPAHPGTSHSPFGLRRA*CCSGRQ
Trigger: TTGCCTCCCAGAGCAGCACAATGCCCGTCTGAGCCC...GAAGGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR CCA 72 bp TGTTCAGTCCACCCCGGAGCTGGCACCGGCCCACCCTaGAACCAGCCACTCACCCTTCCTAACACAACGGGA +
Preference number: 3 (lower is better)
Translates to: CSVHPGAGTGPP*NQPLTLPNTTG
Trigger: TCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTGAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR CAA 90 bp GCACCGGCCCACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCAACCTTCCTGACTCTTaGCCAGAAACAGGCCCAAAC +
Preference number: 3 (lower is better)
Translates to: APAHPGTSHSPFLTQRDGNLPDS*PETGPN
Trigger: GTTTGGGCCTGTTTCTGGCAAAGAGTCAGGAAGGTT...GCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR CAA 90 bp GGCCCACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGCACGTATGTATCACCTaGCGACCCACAAAAGTGCAA +
Preference number: 3 (lower is better)
Translates to: GPPWNQPLTLPNTTGRPLHVCIT*RPTKVQ
Trigger: TTGCACTTTTGTGGGTCGCAAGGTGATACATACGTG...CAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR CAA 90 bp ACCCTTCCTAACACAACGGGACGGCCCTTGGAAGAGAAAACAAAAACACTCCAAAACCTTCCTGACTCTTaGCCAGAAACAGGCCCAAAC +
Preference number: 3 (lower is better)
Translates to: TLPNTTGRPLEEKTKTLQNLPDS*PETGPN
Trigger: GTTTGGGCCTGTTTCTGGCAAAGAGTCAGGAAGGTT...TTGGAGTGTTTTTGTTTTCTCTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
3UTR-3UTR CAA 90 bp ACCCTTCCTAACACAACGGGACGGCCCTTGGAAGAGAAAACAAAAACACTCCAAACAACGGGACGGCCCTaGGAAGAGAAAACAAAAACA +
Preference number: 3 (lower is better)
Translates to: TLPNTTGRPLEEKTKTLQTTGRP*EEKTKT
Trigger: TGTTTTTGTTTTCTCTTCCAAGGGCCGTCCCGTTGT...TTGGAGTGTTTTTGTTTTCTCTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR TCA 90 bp ATGCAGCCTGCCCTCTGCCAGCCGTGCGGAGGCAGACGGAGGGGCACGGGGCTGCCAGGCACCGAGGGGTaGGGCGTGGGTGTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: MQPALCQPCGGRRRGTGLPGTEG*GVGVLG
Trigger: ACCCAGGACACCCACGCCTCACCCCTCGGTGCCTGG...CAGCCCCGTGCCCCTCCGTCTGCCTCCGCACGGCTGGCAGAGGGCAGGCTGCAT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
CDS-3UTR TCA 90 bp AGGGACAGCCGCCGCTGTTCAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGCCCTCACCCCGAGTCTaGGGCGCACGGAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: RDSRRCSVHPGAGTGPPWPSPRV*GARRRR
Trigger: TCTCCTCCTCCGTGCGCCTCAGACTCGGGGTGAGGG...CCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTGAACAGCGGCGGCTGTCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR GCA 90 bp ATGCAGCCTGCCCTCTGCCAGCCGTGCGGAGGCAGACGGAGGGGCACGGGGCTGCCACTGCATGCAGCCTaGCCTCTGCCAGCCGTGCGG +
Preference number: 4 (lower is better)
Translates to: MQPALCQPCGGRRRGTGLPLHAA*PLPAVR
Trigger: CCGCACGGCTGGCAGAGGGCAGGCTGCATGCAGTGG...CAGCCCCGTGCCCCTCCGTCTGCCTCCGCACGGCTGGCAGAGGGCAGGCTGCAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
CDS-3UTR GCA 90 bp ATGCAGCCTGCCCTCTGCCAGCCGTGCGGAGGCAGACGGAGGGGCACGGGGCTGGGCTGGGCCTGTGTGTaGCCCGTCCCAGAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: MQPALCQPCGGRRRGTGLGWACV*PVPEAP
Trigger: AGGAGCCTCTGGGACGGGGCACACACAGGCCCAGCC...CAGCCCCGTGCCCCTCCGTCTGCCTCCGCACGGCTGGCAGAGGGCAGGCTGCAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR CCA 90 bp ATGCAGCCTGCCCTCTGCCAGCCGTGCGGAGGCAGACGGAGGGGCACGGGGCTGAGTCCACCCCGGAGCTaGCACCGGCCCACCCTGGAA +
Preference number: 4 (lower is better)
Translates to: MQPALCQPCGGRRRGTGLSPPRS*HRPTLE
Trigger: TTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACT...CAGCCCCGTGCCCCTCCGTCTGCCTCCGCACGGCTGGCAGAGGGCAGGCTGCAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR TCA 90 bp AGCCGCCGCTGTTCAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGAACCAGCCCTCACCCCGAGTCTaGGGCGCACGGAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: SRRCSVHPGAGTGPPWNQPSPRV*GARRRR
Trigger: TCTCCTCCTCCGTGCGCCTCAGACTCGGGGTGAGGG...CTGGTTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTGAACAGCGGCGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR GCA 90 bp ATGCAGCCTGCCCTCTGCCAGCCGTGCGGAGGCAGACGGAGGGGCACGGGGCTGATGCAGCCTGCCCTCTaGCAGCCGTGCGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: MQPALCQPCGGRRRGTGLMQPAL*QPCGGR
Trigger: TCTGCCTCCGCACGGCTGGCAGAGGGCAGGCTGCAT...CAGCCCCGTGCCCCTCCGTCTGCCTCCGCACGGCTGGCAGAGGGCAGGCTGCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
CDS-3UTR GCA 90 bp ATGCAGCCTGCCCTCTGCCAGCCGTGCGGAGGCAGACGGAGGGGCACGGGGCTGCCCAGTAGCCGCCACTaGATGCAGCCTGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: MQPALCQPCGGRRRGTGLPSSRH*MQPALC
Trigger: GCAGAGGGCAGGCTGCATGCAGTGGCGGCTACTGGG...CAGCCCCGTGCCCCTCCGTCTGCCTCCGCACGGCTGGCAGAGGGCAGGCTGCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
CDS-3UTR GCA 90 bp AGCCGCCGCTGTTCAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGAACCAGCGTCCCAGAGGCTCCTaGCACGTGGGGCTCAGACGG +
Preference number: 4 (lower is better)
Translates to: SRRCSVHPGAGTGPPWNQRPRGS*HVGLRR
Trigger: CCGTCTGAGCCCCACGTGGCAGGAGCCTCTGGGACG...CTGGTTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTGAACAGCGGCGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR CCA 90 bp ATGCAGCCTGCCCTCTGCCAGCCGTGCGGAGGCAGACGGAGGGGCACGGGGCTGGCAGGAGCCCCCACCTaGAGGCTAGGCACTCACACA +
Preference number: 4 (lower is better)
Translates to: MQPALCQPCGGRRRGTGLAGAPT*RLGTHT
Trigger: TGTGTGAGTGCCTAGCCTCCAGGTGGGGGCTCCTGC...CAGCCCCGTGCCCCTCCGTCTGCCTCCGCACGGCTGGCAGAGGGCAGGCTGCAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
CDS-3UTR CCA 90 bp ATGCAGCCTGCCCTCTGCCAGCCGTGCGGAGGCAGACGGAGGGGCACGGGGCTGAGCACTGGAGATGCCTaGGTGGGAGCTCAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: MQPALCQPCGGRRRGTGLSTGDA*VGAQEG
Trigger: GCCCTCCTGAGCTCCCACCCAGGCATCTCCAGTGCT...CAGCCCCGTGCCCCTCCGTCTGCCTCCGCACGGCTGGCAGAGGGCAGGCTGCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
CDS-3UTR TCA 90 bp ATGCAGCCTGCCCTCTGCCAGCCGTGCGGAGGCAGACGGAGGGGCACGGGGCTGAACAGGCCCAAACTGTaGGGGGTGGAGTTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: MQPALCQPCGGRRRGTGLNRPKL*GVELGD
Trigger: GTCCCCCAACTCCACCCCTCACAGTTTGGGCCTGTT...CAGCCCCGTGCCCCTCCGTCTGCCTCCGCACGGCTGGCAGAGGGCAGGCTGCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
CDS-3UTR GCA 90 bp GGAGCTGGCACCGGCCCACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGCCCTCTGCCAGCCGTaGGGAGGCAGACGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: GAGTGPPWNQPLTLPNTTALCQP*GGRRRG
Trigger: GCCCCTCCGTCTGCCTCCGCACGGCTGGCAGAGGGC...CGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGCCAGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR CCA 90 bp AGCCGCCGCTGTTCAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGAACCAGCTGGAGATGCCTGGGTaGGAGCTCAGGAGGGCACAC +
Preference number: 4 (lower is better)
Translates to: SRRCSVHPGAGTGPPWNQLEMPG*ELRRAH
Trigger: GTGTGCCCTCCTGAGCTCCCACCCAGGCATCTCCAG...CTGGTTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTGAACAGCGGCGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR CCA 90 bp AGCCGCCGCTGTTCAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGAACCAGAGCACTGGAGATGCCTaGGTGGGAGCTCAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: SRRCSVHPGAGTGPPWNQSTGDA*VGAQEG
Trigger: GCCCTCCTGAGCTCCCACCCAGGCATCTCCAGTGCT...CTGGTTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTGAACAGCGGCGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR GCA 90 bp AGGGCAGGAGCCCCCACCTGGAGGCTAGGCACTCACACACTGAGAGGCAGCATAGCCCTCTGCCAGCCGTaGGGAGGCAGACGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: RAGAPTWRLGTHTLRGSIALCQP*GGRRRG
Trigger: GCCCCTCCGTCTGCCTCCGCACGGCTGGCAGAGGGC...TATGCTGCCTCTCAGTGTGTGAGTGCCTAGCCTCCAGGTGGGGGCTCCTGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380025.8
ENST00000402554.7
CDS-3UTR GCA 90 bp ATGCAGCCTGCCCTCTGCCAGCCGTGCGGAGGCAGACGGAGGGGCACGGGGCTGCATGAGCACTGGAGATaGCTGGGTGGGAGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: MQPALCQPCGGRRRGTGLHEHWR*LGGSSG
Trigger: TCCTGAGCTCCCACCCAGGCATCTCCAGTGCTCATG...CAGCCCCGTGCCCCTCCGTCTGCCTCCGCACGGCTGGCAGAGGGCAGGCTGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
CDS-3UTR GCA 90 bp ATGCAGCCTGCCCTCTGCCAGCCGTGCGGAGGCAGACGGAGGGGCACGGGGCTGCTCAGACGGGCATTGTaGTGCTCTGGGAGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: MQPALCQPCGGRRRGTGLLRRAL*CSGRQV
Trigger: GACTTGCCTCCCAGAGCAGCACAATGCCCGTCTGAG...CAGCCCCGTGCCCCTCCGTCTGCCTCCGCACGGCTGGCAGAGGGCAGGCTGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
CDS-3UTR GCA 90 bp GCACCGGCCCACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCCGTCCCAGAGGCTCCTaGCACGTGGGGCTCAGACGG +
Preference number: 4 (lower is better)
Translates to: APAHPGTSHSPFLTQRDGRPRGS*HVGLRR
Trigger: CCGTCTGAGCCCCACGTGGCAGGAGCCTCTGGGACG...GCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR CCA 90 bp AAGGATGCACAGGGACAGCCGCCGCTGTTCAGTCCACCCCGGAGCTGGCACCGGGGTGTCCTGGGTTGTTaGAGGAGGGCAGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: KDAQGQPPLFSPPRSWHRGVLGC*RRAGAP
Trigger: GGGGGCTCCTGCCCTCCTCCAACAACCCAGGACACC...CCGGTGCCAGCTCCGGGGTGGACTGAACAGCGGCGGCTGTCCCTGTGCATCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR CCA 90 bp GTTCAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGAACCAGCCACTCACCCAGCACTGGAGATGCCTaGGTGGGAGCTCAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: VQSTPELAPAHPGTSHSPSTGDA*VGAQEG
Trigger: GCCCTCCTGAGCTCCCACCCAGGCATCTCCAGTGCT...GGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR CCA 90 bp AAGGATGCACAGGGACAGCCGCCGCTGTTCAGTCCACCCCGGAGCTGGCACCGGGGCACCGGCCCACCCTaGAACCAGCCACTCACCCTT +
Preference number: 4 (lower is better)
Translates to: KDAQGQPPLFSPPRSWHRGTGPP*NQPLTL
Trigger: AAGGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGCC...CCGGTGCCAGCTCCGGGGTGGACTGAACAGCGGCGGCTGTCCCTGTGCATCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR TCA 90 bp ATGCAGCCTGCCCTCTGCCAGCCGTGCGGAGGCAGACGGAGGGGCACGGGGCTGAGCTGGCAAAGAAAGTaGTGCTTGGACGGCGGAGTC +
Preference number: 4 (lower is better)
Translates to: MQPALCQPCGGRRRGTGLSWQRK*CLDGGV
Trigger: GACTCCGCCGTCCAAGCATCACTTTCTTTGCCAGCT...CAGCCCCGTGCCCCTCCGTCTGCCTCCGCACGGCTGGCAGAGGGCAGGCTGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
CDS-3UTR TCA 90 bp GTTCAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGAACCAGCCACTCACCCAACAGGCCCAAACTGTaGGGGGTGGAGTTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: VQSTPELAPAHPGTSHSPNRPKL*GVELGD
Trigger: GTCCCCCAACTCCACCCCTCACAGTTTGGGCCTGTT...GGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTGAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR TCA 90 bp ATGCAGCCTGCCCTCTGCCAGCCGTGCGGAGGCAGACGGAGGGGCACGGGGCTGAAGATGTCGTTGAACTaGAGGACGGGAAGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: MQPALCQPCGGRRRGTGLKMSLN*RTGRLA
Trigger: CGCCAGCCTTCCCGTCCTTCAGTTCAACGACATCTT...CAGCCCCGTGCCCCTCCGTCTGCCTCCGCACGGCTGGCAGAGGGCAGGCTGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR GCA 90 bp GCACCGGCCCACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCATGCAGCCTGCCCTCTaGCAGCCGTGCGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: APAHPGTSHSPFLTQRDGMQPAL*QPCGGR
Trigger: TCTGCCTCCGCACGGCTGGCAGAGGGCAGGCTGCAT...GCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR TCA 90 bp AGCCGCCGCTGTTCAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGAACCAGAGCTGGCAAAGAAAGTaGTGCTTGGACGGCGGAGTC +
Preference number: 4 (lower is better)
Translates to: SRRCSVHPGAGTGPPWNQSWQRK*CLDGGV
Trigger: GACTCCGCCGTCCAAGCATCACTTTCTTTGCCAGCT...CTGGTTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTGAACAGCGGCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR TCA 90 bp AAGGATGCACAGGGACAGCCGCCGCTGTTCAGTCCACCCCGGAGCTGGCACCGGAACAGGCCCAAACTGTaGGGGGTGGAGTTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: KDAQGQPPLFSPPRSWHRNRPKL*GVELGD
Trigger: GTCCCCCAACTCCACCCCTCACAGTTTGGGCCTGTT...CCGGTGCCAGCTCCGGGGTGGACTGAACAGCGGCGGCTGTCCCTGTGCATCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR GCA 90 bp GGCCCACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGATGCAGCCTGCCCTCTaGCAGCCGTGCGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: GPPWNQPLTLPNTTGRPLMQPAL*QPCGGR
Trigger: TCTGCCTCCGCACGGCTGGCAGAGGGCAGGCTGCAT...CAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTGGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR GCA 90 bp CAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGAACCAGCCACTCACCCTTCCTCAGACGGGCATTGTaGTGCTCTGGGAGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: QSTPELAPAHPGTSHSPFLRRAL*CSGRQV
Trigger: GACTTGCCTCCCAGAGCAGCACAATGCCCGTCTGAG...GAAGGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR CCA 90 bp ATGCAGCCTGCCCTCTGCCAGCCGTGCGGAGGCAGACGGAGGGGCACGGGGCTGTGTGAGGGGTGGAGTTaGGGGACACATGATCATGAG +
Preference number: 4 (lower is better)
Translates to: MQPALCQPCGGRRRGTGLCEGWS*GTHDHE
Trigger: CTCATGATCATGTGTCCCCCAACTCCACCCCTCACA...CAGCCCCGTGCCCCTCCGTCTGCCTCCGCACGGCTGGCAGAGGGCAGGCTGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
CDS-3UTR CCA 90 bp AGGGCAGGAGCCCCCACCTGGAGGCTAGGCACTCACACACTGAGAGGCAGCATAGAAGGACGGGAAGGCTaGCGAGAGGCTGCCCGCCTC +
Preference number: 4 (lower is better)
Translates to: RAGAPTWRLGTHTLRGSIEGREG*REAARL
Trigger: GAGGCGGGCAGCCTCTCGCCAGCCTTCCCGTCCTTC...TATGCTGCCTCTCAGTGTGTGAGTGCCTAGCCTCCAGGTGGGGGCTCCTGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380025.8
CDS-3UTR CCA 90 bp GGCCCACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGGCACCGGCCCACCCTaGAACCAGCCACTCACCCTT +
Preference number: 4 (lower is better)
Translates to: GPPWNQPLTLPNTTGRPLGTGPP*NQPLTL
Trigger: AAGGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGCC...CAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTGGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR TCA 90 bp AGCCGCCGCTGTTCAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGAACCAGCTCCAAAGATGTCGTTaGACTGAAGGACGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: SRRCSVHPGAGTGPPWNQLQRCR*TEGREG
Trigger: GCCTTCCCGTCCTTCAGTTCAACGACATCTTTGGAG...CTGGTTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTGAACAGCGGCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR GCA 90 bp AGGGCAGGAGCCCCCACCTGGAGGCTAGGCACTCACACACTGAGAGGCAGCATACCCAGTAGCCGCCACTaGATGCAGCCTGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: RAGAPTWRLGTHTLRGSIPSSRH*MQPALC
Trigger: GCAGAGGGCAGGCTGCATGCAGTGGCGGCTACTGGG...TATGCTGCCTCTCAGTGTGTGAGTGCCTAGCCTCCAGGTGGGGGCTCCTGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380025.8
ENST00000402554.7
CDS-3UTR GCA 90 bp AGGGACAGCCGCCGCTGTTCAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGATGATCCTATACAGCTaGCCAGAGGAGGACACCATC +
Preference number: 4 (lower is better)
Translates to: RDSRRCSVHPGAGTGPPWMILYS*PEEDTI
Trigger: GATGGTGTCCTCCTCTGGGCAGCTGTATAGGATCAT...CCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTGAACAGCGGCGGCTGTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR CCA 90 bp GGAGCTGGCACCGGCCCACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGCAGGAGCCCCCACCTaGAGGCTAGGCACTCACACA +
Preference number: 4 (lower is better)
Translates to: GAGTGPPWNQPLTLPNTTAGAPT*RLGTHT
Trigger: TGTGTGAGTGCCTAGCCTCCAGGTGGGGGCTCCTGC...CGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGCCAGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR TCA 90 bp AAGGATGCACAGGGACAGCCGCCGCTGTTCAGTCCACCCCGGAGCTGGCACCGGAGCTGGCAAAGAAAGTaGTGCTTGGACGGCGGAGTC +
Preference number: 4 (lower is better)
Translates to: KDAQGQPPLFSPPRSWHRSWQRK*CLDGGV
Trigger: GACTCCGCCGTCCAAGCATCACTTTCTTTGCCAGCT...CCGGTGCCAGCTCCGGGGTGGACTGAACAGCGGCGGCTGTCCCTGTGCATCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR TCA 90 bp ATGCAGCCTGCCCTCTGCCAGCCGTGCGGAGGCAGACGGAGGGGCACGGGGCTGGAAAGATGTATGCCCTaGTCGAGAGAACTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: MQPALCQPCGGRRRGTGLERCMP*SRELCA
Trigger: GGCACAAAGTTCTCTCGATCAGGGCATACATCTTTC...CAGCCCCGTGCCCCTCCGTCTGCCTCCGCACGGCTGGCAGAGGGCAGGCTGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000402554.7
CDS-3UTR CCA 90 bp CACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAAGGGTGTCCTGGGTTGTTaGAGGAGGGCAGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: HPGTSHSPFLTQRDGPWKGVLGC*RRAGAP
Trigger: GGGGGCTCCTGCCCTCCTCCAACAACCCAGGACACC...CTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR CCA 90 bp AGGGCAGGAGCCCCCACCTGGAGGCTAGGCACTCACACACTGAGAGGCAGCATACTGGAGATGCCTGGGTaGGAGCTCAGGAGGGCACAC +
Preference number: 4 (lower is better)
Translates to: RAGAPTWRLGTHTLRGSILEMPG*ELRRAH
Trigger: GTGTGCCCTCCTGAGCTCCCACCCAGGCATCTCCAG...TATGCTGCCTCTCAGTGTGTGAGTGCCTAGCCTCCAGGTGGGGGCTCCTGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380025.8
ENST00000402554.7
CDS-3UTR CCA 90 bp GTTCAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGAACCAGCCACTCACCCTGTGAGGGGTGGAGTTaGGGGACACATGATCATGAG +
Preference number: 4 (lower is better)
Translates to: VQSTPELAPAHPGTSHSPCEGWS*GTHDHE
Trigger: CTCATGATCATGTGTCCCCCAACTCCACCCCTCACA...GGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR CCA 90 bp ATGCAGCCTGCCCTCTGCCAGCCGTGCGGAGGCAGACGGAGGGGCACGGGGCTGTGGGAGGCAAGTCCATaGAATGGTAGCTGCTTAAGT +
Preference number: 4 (lower is better)
Translates to: MQPALCQPCGGRRRGTGLWEASP*NGSCLS
Trigger: ACTTAAGCAGCTACCATTCCATGGACTTGCCTCCCA...CAGCCCCGTGCCCCTCCGTCTGCCTCCGCACGGCTGGCAGAGGGCAGGCTGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
CDS-3UTR GCA 90 bp ATGCAGCCTGCCCTCTGCCAGCCGTGCGGAGGCAGACGGAGGGGCACGGGGCTGTGCGACCCACAAAAGTaGAATCATGTGAAACCAACG +
Preference number: 4 (lower is better)
Translates to: MQPALCQPCGGRRRGTGLCDPQK*NHVKPT
Trigger: CGTTGGTTTCACATGATTGCACTTTTGTGGGTCGCA...CAGCCCCGTGCCCCTCCGTCTGCCTCCGCACGGCTGGCAGAGGGCAGGCTGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
CDS-3UTR GCA 90 bp AAGGATGCACAGGGACAGCCGCCGCTGTTCAGTCCACCCCGGAGCTGGCACCGGAGAGTAATCAAAGGATaGACAGGGACAGCCGCCGCT +
Preference number: 4 (lower is better)
Translates to: KDAQGQPPLFSPPRSWHRRVIKG*TGTAAA
Trigger: AGCGGCGGCTGTCCCTGTGCATCCTTTGATTACTCT...CCGGTGCCAGCTCCGGGGTGGACTGAACAGCGGCGGCTGTCCCTGTGCATCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR CCA 90 bp CCACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAAAGACAGCACAGAGGCTaGGCCTGTGTGTGCCCCGTC +
Preference number: 4 (lower is better)
Translates to: PPWNQPLTLPNTTGRPLERQHRG*ACVCPV
Trigger: GACGGGGCACACACAGGCCCAGCCTCTGTGCTGTCT...TTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR CCA 90 bp CACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAAGAGACAGCACAGAGGCTaGGCCTGTGTGTGCCCCGTC +
Preference number: 4 (lower is better)
Translates to: HPGTSHSPFLTQRDGPWKRQHRG*ACVCPV
Trigger: GACGGGGCACACACAGGCCCAGCCTCTGTGCTGTCT...CTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR TCA 90 bp AGCCGCCGCTGTTCAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGAACCAGTGGTATAGCTTTCGGTaGAGGAAAAGTGTTCTCCGT +
Preference number: 4 (lower is better)
Translates to: SRRCSVHPGAGTGPPWNQWYSFR*RKSVLR
Trigger: ACGGAGAACACTTTTCCTTCACCGAAAGCTATACCA...CTGGTTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTGAACAGCGGCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR TCA 90 bp TTCCTGACTCTTTGCCAGAAACAGGCCCAAACTGTGAGGGGTGGAGTTGGGGGACAGCATACCCGGCGCTaGCGATGGACGCGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: FLTLCQKQAQTVRGGVGGQHTRR*RWTRGA
Trigger: GGCTCCTCGCGTCCATCGTCAGCGCCGGGTATGCTG...TCCCCCAACTCCACCCCTCACAGTTTGGGCCTGTTTCTGGCAAAGAGTCAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
CDS-3UTR GCA 90 bp ATGCAGCCTGCCCTCTGCCAGCCGTGCGGAGGCAGACGGAGGGGCACGGGGCTGACGTATGTATCACCTTaGGACCCACAAAAGTGCAAT +
Preference number: 4 (lower is better)
Translates to: MQPALCQPCGGRRRGTGLTYVSP*DPQKCN
Trigger: ATTGCACTTTTGTGGGTCGCAAGGTGATACATACGT...CAGCCCCGTGCCCCTCCGTCTGCCTCCGCACGGCTGGCAGAGGGCAGGCTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
CDS-3UTR GCA 90 bp CAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGAACCAGCCACTCACCCTTCACCTTCCTGACTCTTTaGCAGAAACAGGCCCAAACT +
Preference number: 4 (lower is better)
Translates to: QSTPELAPAHPGTSHSPFTFLTL*QKQAQT
Trigger: AGTTTGGGCCTGTTTCTGGCAAAGAGTCAGGAAGGT...GAAGGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR CCA 90 bp AGCCGCCGCTGTTCAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGAACCAGTCATCCCGAGCTTCCTaGAAGCTTTGCTTATACTTC +
Preference number: 4 (lower is better)
Translates to: SRRCSVHPGAGTGPPWNQSSRAS*KLCLYF
Trigger: GAAGTATAAGCAAAGCTTCCAGGAAGCTCGGGATGA...CTGGTTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTGAACAGCGGCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR CCA 90 bp GATGTCGTTGAACTGAAGGACGGGAAGGCTGGCGAGAGGCTGCCCGCCTCCCTCCATGATCATGAGCACTaGAGATGCCTGGGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: DVVELKDGKAGERLPASLHDHEH*RCLGGS
Trigger: GCTCCCACCCAGGCATCTCCAGTGCTCATGATCATG...GAGGGAGGCGGGCAGCCTCTCGCCAGCCTTCCCGTCCTTCAGTTCAACGACATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR CCA 90 bp GGAGCTGGCACCGGCCCACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGCATGATCATGAGCACTaGAGATGCCTGGGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: GAGTGPPWNQPLTLPNTTHDHEH*RCLGGS
Trigger: GCTCCCACCCAGGCATCTCCAGTGCTCATGATCATG...CGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGCCAGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR TCA 90 bp AGGGACAGCCGCCGCTGTTCAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGTTAATGGCCCGAGTCTaGCTTAAATCATCTTCTAAC +
Preference number: 4 (lower is better)
Translates to: RDSRRCSVHPGAGTGPPWLMARV*LKSSSN
Trigger: GTTAGAAGATGATTTAAGTCAGACTCGGGCCATTAA...CCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTGAACAGCGGCGGCTGTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR TCA 90 bp AGGGCAGGAGCCCCCACCTGGAGGCTAGGCACTCACACACTGAGAGGCAGCATAAAGATGTCGTTGAACTaGAGGACGGGAAGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: RAGAPTWRLGTHTLRGSIKMSLN*RTGRLA
Trigger: CGCCAGCCTTCCCGTCCTTCAGTTCAACGACATCTT...TATGCTGCCTCTCAGTGTGTGAGTGCCTAGCCTCCAGGTGGGGGCTCCTGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380025.8
CDS-3UTR TCA 90 bp GATGTCGTTGAACTGAAGGACGGGAAGGCTGGCGAGAGGCTGCCCGCCTCCCTCCTCCAAAGATGTCGTTaGACTGAAGGACGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: DVVELKDGKAGERLPASLLQRCR*TEGREG
Trigger: GCCTTCCCGTCCTTCAGTTCAACGACATCTTTGGAG...GAGGGAGGCGGGCAGCCTCTCGCCAGCCTTCCCGTCCTTCAGTTCAACGACATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR TCA 90 bp ATGCAGCCTGCCCTCTGCCAGCCGTGCGGAGGCAGACGGAGGGGCACGGGGCTGACAACGTGGGAAATATaGCTTTTTCTTGCCCTTTGT +
Preference number: 4 (lower is better)
Translates to: MQPALCQPCGGRRRGTGLTTWEI*LFLALC
Trigger: ACAAAGGGCAAGAAAAAGTCATATTTCCCACGTTGT...CAGCCCCGTGCCCCTCCGTCTGCCTCCGCACGGCTGGCAGAGGGCAGGCTGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000402554.7
CDS-3UTR GCA 90 bp AGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAAGAGAAAACAAAAAGCCCTCTGCCAGCCGTaGGGAGGCAGACGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SHSPFLTQRDGPWKRKQKALCQP*GGRRRG
Trigger: GCCCCTCCGTCTGCCTCCGCACGGCTGGCAGAGGGC...TTTTTGTTTTCTCTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR GCA 90 bp CAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAAGAGAAAACAAAAAGGCTGGCGAGAGGCTaGCCGCCTCCCTCACCCCGA +
Preference number: 4 (lower is better)
Translates to: QPLTLPNTTGRPLEEKTKRLARG*PPPSPR
Trigger: TCGGGGTGAGGGAGGCGGGCAGCCTCTCGCCAGCCT...TTTTGTTTTCTCTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR CCA 90 bp GGCCCACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGCTATTGTTGCCCTTTTaGCTCGCTCCAGGTCGTCGT +
Preference number: 4 (lower is better)
Translates to: GPPWNQPLTLPNTTGRPLLLLPF*LAPGRR
Trigger: ACGACGACCTGGAGCGAGCCAAAAGGGCAACAATAG...CAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR CCA 90 bp CAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGAACCAGCCACTCACCCTTCAAAGAAAGTGATGCTTaGACGGCGGAGTCCATCTTT +
Preference number: 4 (lower is better)
Translates to: QSTPELAPAHPGTSHSPFKESDA*TAESIF
Trigger: AAAGATGGACTCCGCCGTCCAAGCATCACTTTCTTT...GAAGGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR CCA 90 bp TTCCTGACTCTTTGCCAGAAACAGGCCCAAACTGTGAGGGGTGGAGTTGGGGGAGGTGTCCTGGGTTGTTaGAGGAGGGCAGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: FLTLCQKQAQTVRGGVGGGVLGC*RRAGAP
Trigger: GGGGGCTCCTGCCCTCCTCCAACAACCCAGGACACC...TCCCCCAACTCCACCCCTCACAGTTTGGGCCTGTTTCTGGCAAAGAGTCAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
CDS-3UTR CCA 90 bp AGGGCAGGAGCCCCCACCTGGAGGCTAGGCACTCACACACTGAGAGGCAGCATACATGATCATGAGCACTaGAGATGCCTGGGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: RAGAPTWRLGTHTLRGSIHDHEH*RCLGGS
Trigger: GCTCCCACCCAGGCATCTCCAGTGCTCATGATCATG...TATGCTGCCTCTCAGTGTGTGAGTGCCTAGCCTCCAGGTGGGGGCTCCTGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380025.8
ENST00000402554.7
CDS-3UTR TCA 90 bp CAAAAACACTCCAAAGATGTCGTTGAACTGAAGGACGGGAAGGCTGGCGAGAGGCAGCATACCCGGCGCTaGCGATGGACGCGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: QKHSKDVVELKDGKAGERQHTRR*RWTRGA
Trigger: GGCTCCTCGCGTCCATCGTCAGCGCCGGGTATGCTG...CCTCTCGCCAGCCTTCCCGTCCTTCAGTTCAACGACATCTTTGGAGTGTTTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR GCA 90 bp AGCCGCCGCTGTTCAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGAACCAGTCGAAGAAAGATGTATaGCCTGATCGAGAGAACTTT +
Preference number: 4 (lower is better)
Translates to: SRRCSVHPGAGTGPPWNQSKKDV*PDRENF
Trigger: AAAGTTCTCTCGATCAGGGCATACATCTTTCTTCGA...CTGGTTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTGAACAGCGGCGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334527.12
CDS-3UTR GCA 90 bp CAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAAGAGAAAACAAAACCACTGCATGCAGCCTaGCCTCTGCCAGCCGTGCGG +
Preference number: 4 (lower is better)
Translates to: QPLTLPNTTGRPLEEKTKPLHAA*PLPAVR
Trigger: CCGCACGGCTGGCAGAGGGCAGGCTGCATGCAGTGG...TTTTGTTTTCTCTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR GCA 90 bp AAGGATGCACAGGGACAGCCGCCGCTGTTCAGTCCACCCCGGAGCTGGCACCGGTGCGACCCACAAAAGTaGAATCATGTGAAACCAACG +
Preference number: 4 (lower is better)
Translates to: KDAQGQPPLFSPPRSWHRCDPQK*NHVKPT
Trigger: CGTTGGTTTCACATGATTGCACTTTTGTGGGTCGCA...CCGGTGCCAGCTCCGGGGTGGACTGAACAGCGGCGGCTGTCCCTGTGCATCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR CCA 90 bp AGGGCAGGAGCCCCCACCTGGAGGCTAGGCACTCACACACTGAGAGGCAGCATATGTGAGGGGTGGAGTTaGGGGACACATGATCATGAG +
Preference number: 4 (lower is better)
Translates to: RAGAPTWRLGTHTLRGSICEGWS*GTHDHE
Trigger: CTCATGATCATGTGTCCCCCAACTCCACCCCTCACA...TATGCTGCCTCTCAGTGTGTGAGTGCCTAGCCTCCAGGTGGGGGCTCCTGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380025.8
ENST00000402554.7
CDS-3UTR CCA 90 bp AGGGCAGGAGCCCCCACCTGGAGGCTAGGCACTCACACACTGAGAGGCAGCATACCAAACTGTGAGGGGTaGAGTTGGGGGACACATGAT +
Preference number: 4 (lower is better)
Translates to: RAGAPTWRLGTHTLRGSIPNCEG*SWGTHD
Trigger: ATCATGTGTCCCCCAACTCCACCCCTCACAGTTTGG...TATGCTGCCTCTCAGTGTGTGAGTGCCTAGCCTCCAGGTGGGGGCTCCTGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000380025.8
ENST00000402554.7
CDS-3UTR CCA 90 bp AGGGCAGGAGCCCCCACCTGGAGGCTAGGCACTCACACACTGAGAGGCAGCATAGGCATTGTGCTGCTCTaGGAGGCAAGTCCATGGAAT +
Preference number: 4 (lower is better)
Translates to: RAGAPTWRLGTHTLRGSIGIVLL*EASPWN
Trigger: ATTCCATGGACTTGCCTCCCAGAGCAGCACAATGCC...TATGCTGCCTCTCAGTGTGTGAGTGCCTAGCCTCCAGGTGGGGGCTCCTGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380025.8
ENST00000402554.7
CDS-3UTR CCA 90 bp CAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAAGAGAAAACAAAAAGTCCACCCCGGAGCTaGCACCGGCCCACCCTGGAA +
Preference number: 4 (lower is better)
Translates to: QPLTLPNTTGRPLEEKTKSPPRS*HRPTLE
Trigger: TTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACT...TTTTGTTTTCTCTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR TCA 90 bp AAGGATGCACAGGGACAGCCGCCGCTGTTCAGTCCACCCCGGAGCTGGCACCGGTATCTTCACCATCCATaGTCAAGAAAGCCTCCAATG +
Preference number: 4 (lower is better)
Translates to: KDAQGQPPLFSPPRSWHRYLHHP*SRKPPM
Trigger: CATTGGAGGCTTTCTTGATCATGGATGGTGAAGATA...CCGGTGCCAGCTCCGGGGTGGACTGAACAGCGGCGGCTGTCCCTGTGCATCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR TCA 90 bp GCACCGGCCCACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCTGGTATAGCTTTCGGTaGAGGAAAAGTGTTCTCCGT +
Preference number: 4 (lower is better)
Translates to: APAHPGTSHSPFLTQRDGWYSFR*RKSVLR
Trigger: ACGGAGAACACTTTTCCTTCACCGAAAGCTATACCA...GCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR TCA 90 bp ACCCTTCCTAACACAACGGGACGGCCCTTGGAAGAGAAAACAAAAACACTCCAACCAGGCACCGAGGGGTaGGGCGTGGGTGTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: TLPNTTGRPLEEKTKTLQPGTEG*GVGVLG
Trigger: ACCCAGGACACCCACGCCTCACCCCTCGGTGCCTGG...TTGGAGTGTTTTTGTTTTCTCTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR TCA 90 bp GGAGCTGGCACCGGCCCACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGAAAAGTGCAATCATGTaGAACCAACGGCACTACGGC +
Preference number: 4 (lower is better)
Translates to: GAGTGPPWNQPLTLPNTTKSAIM*NQRHYG
Trigger: GCCGTAGTGCCGTTGGTTTCACATGATTGCACTTTT...CGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGCCAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR GCA 90 bp CAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGAACCAGCCACTCACCCTTCGCTTCCTGGAAGCTTTaGTTATACTTCAAGGAAAGT +
Preference number: 4 (lower is better)
Translates to: QSTPELAPAHPGTSHSPFASWKL*LYFKES
Trigger: ACTTTCCTTGAAGTATAAGCAAAGCTTCCAGGAAGC...GAAGGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR GCA 90 bp GCACCGGCCCACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCTGCGACCCACAAAAGTaGAATCATGTGAAACCAACG +
Preference number: 4 (lower is better)
Translates to: APAHPGTSHSPFLTQRDGCDPQK*NHVKPT
Trigger: CGTTGGTTTCACATGATTGCACTTTTGTGGGTCGCA...GCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR GCA 90 bp ACCCTTCCTAACACAACGGGACGGCCCTTGGAAGAGAAAACAAAAACACTCCAAAGGCTGGCGAGAGGCTaGCCGCCTCCCTCACCCCGA +
Preference number: 4 (lower is better)
Translates to: TLPNTTGRPLEEKTKTLQRLARG*PPPSPR
Trigger: TCGGGGTGAGGGAGGCGGGCAGCCTCTCGCCAGCCT...TTGGAGTGTTTTTGTTTTCTCTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR GCA 90 bp CCACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAAAGAGTAATCAAAGGATaGACAGGGACAGCCGCCGCT +
Preference number: 4 (lower is better)
Translates to: PPWNQPLTLPNTTGRPLERVIKG*TGTAAA
Trigger: AGCGGCGGCTGTCCCTGTGCATCCTTTGATTACTCT...TTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR CCA 90 bp GATGTCGTTGAACTGAAGGACGGGAAGGCTGGCGAGAGGCTGCCCGCCTCCCTCCAACGGGACGGCCCTTaGAAGAGAAAACAAAAACAC +
Preference number: 4 (lower is better)
Translates to: DVVELKDGKAGERLPASLQRDGP*KRKQKH
Trigger: GTGTTTTTGTTTTCTCTTCCAAGGGCCGTCCCGTTG...GAGGGAGGCGGGCAGCCTCTCGCCAGCCTTCCCGTCCTTCAGTTCAACGACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR GCA 90 bp AGGGCAGGAGCCCCCACCTGGAGGCTAGGCACTCACACACTGAGAGGCAGCATAATCGAGAGAACTTTGTaGCATTGCCATTCAGCACCC +
Preference number: 4 (lower is better)
Translates to: RAGAPTWRLGTHTLRGSIIERTL*HCHSAP
Trigger: GGGTGCTGAATGGCAATGGCACAAAGTTCTCTCGAT...TATGCTGCCTCTCAGTGTGTGAGTGCCTAGCCTCCAGGTGGGGGCTCCTGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402554.7
CDS-3UTR GCA 90 bp TTCCTGACTCTTTGCCAGAAACAGGCCCAAACTGTGAGGGGTGGAGTTGGGGGACTCAGACGGGCATTGTaGTGCTCTGGGAGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: FLTLCQKQAQTVRGGVGGLRRAL*CSGRQV
Trigger: GACTTGCCTCCCAGAGCAGCACAATGCCCGTCTGAG...TCCCCCAACTCCACCCCTCACAGTTTGGGCCTGTTTCTGGCAAAGAGTCAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
CDS-3UTR GCA 90 bp ACCCTTCCTAACACAACGGGACGGCCCTTGGAAGAGAAAACAAAAACACTCCAAGGCTGGGCCTGTGTGTaGCCCGTCCCAGAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: TLPNTTGRPLEEKTKTLQGWACV*PVPEAP
Trigger: AGGAGCCTCTGGGACGGGGCACACACAGGCCCAGCC...TTGGAGTGTTTTTGTTTTCTCTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR GCA 90 bp CCACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAAATGATCCTATACAGCTaGCCAGAGGAGGACACCATC +
Preference number: 4 (lower is better)
Translates to: PPWNQPLTLPNTTGRPLEMILYS*PEEDTI
Trigger: GATGGTGTCCTCCTCTGGGCAGCTGTATAGGATCAT...TTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR GCA 90 bp AAGGATGCACAGGGACAGCCGCCGCTGTTCAGTCCACCCCGGAGCTGGCACCGGCTTTGGTTATCAGCCTaGAAGTCTCTATTTCTTTGT +
Preference number: 4 (lower is better)
Translates to: KDAQGQPPLFSPPRSWHRLWLSA*KSLFLC
Trigger: ACAAAGAAATAGAGACTTGCAGGCTGATAACCAAAG...CCGGTGCCAGCTCCGGGGTGGACTGAACAGCGGCGGCTGTCCCTGTGCATCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR CCA 90 bp AGGGCAGGAGCCCCCACCTGGAGGCTAGGCACTCACACACTGAGAGGCAGCATATCATCCCGAGCTTCCTaGAAGCTTTGCTTATACTTC +
Preference number: 4 (lower is better)
Translates to: RAGAPTWRLGTHTLRGSISSRAS*KLCLYF
Trigger: GAAGTATAAGCAAAGCTTCCAGGAAGCTCGGGATGA...TATGCTGCCTCTCAGTGTGTGAGTGCCTAGCCTCCAGGTGGGGGCTCCTGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380025.8
ENST00000402554.7
CDS-3UTR CCA 90 bp AGGGCAGGAGCCCCCACCTGGAGGCTAGGCACTCACACACTGAGAGGCAGCATAAAAGAAAGTGATGCTTaGACGGCGGAGTCCATCTTT +
Preference number: 4 (lower is better)
Translates to: RAGAPTWRLGTHTLRGSIKESDA*TAESIF
Trigger: AAAGATGGACTCCGCCGTCCAAGCATCACTTTCTTT...TATGCTGCCTCTCAGTGTGTGAGTGCCTAGCCTCCAGGTGGGGGCTCCTGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380025.8
ENST00000402554.7
CDS-3UTR CCA 90 bp AGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAAGAGAAAACAAAAAGCAGGAGCCCCCACCTaGAGGCTAGGCACTCACACA +
Preference number: 4 (lower is better)
Translates to: SHSPFLTQRDGPWKRKQKAGAPT*RLGTHT
Trigger: TGTGTGAGTGCCTAGCCTCCAGGTGGGGGCTCCTGC...TTTTTGTTTTCTCTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR TCA 90 bp AGGGCAGGAGCCCCCACCTGGAGGCTAGGCACTCACACACTGAGAGGCAGCATATATCTTCACCATCCATaGTCAAGAAAGCCTCCAATG +
Preference number: 4 (lower is better)
Translates to: RAGAPTWRLGTHTLRGSIYLHHP*SRKPPM
Trigger: CATTGGAGGCTTTCTTGATCATGGATGGTGAAGATA...TATGCTGCCTCTCAGTGTGTGAGTGCCTAGCCTCCAGGTGGGGGCTCCTGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380025.8
ENST00000402554.7
CDS-3UTR GCA 90 bp AGGGCAGGAGCCCCCACCTGGAGGCTAGGCACTCACACACTGAGAGGCAGCATAGCTTCCTGGAAGCTTTaGTTATACTTCAAGGAAAGT +
Preference number: 4 (lower is better)
Translates to: RAGAPTWRLGTHTLRGSIASWKL*LYFKES
Trigger: ACTTTCCTTGAAGTATAAGCAAAGCTTCCAGGAAGC...TATGCTGCCTCTCAGTGTGTGAGTGCCTAGCCTCCAGGTGGGGGCTCCTGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380025.8
ENST00000402554.7
CDS-3UTR GCA 90 bp GGCCCACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGCTTTGGTTATCAGCCTaGAAGTCTCTATTTCTTTGT +
Preference number: 4 (lower is better)
Translates to: GPPWNQPLTLPNTTGRPLLWLSA*KSLFLC
Trigger: ACAAAGAAATAGAGACTTGCAGGCTGATAACCAAAG...CAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR GCA 90 bp AGGGCAGGAGCCCCCACCTGGAGGCTAGGCACTCACACACTGAGAGGCAGCATATCGAAGAAAGATGTATaGCCTGATCGAGAGAACTTT +
Preference number: 4 (lower is better)
Translates to: RAGAPTWRLGTHTLRGSISKKDV*PDRENF
Trigger: AAAGTTCTCTCGATCAGGGCATACATCTTTCTTCGA...TATGCTGCCTCTCAGTGTGTGAGTGCCTAGCCTCCAGGTGGGGGCTCCTGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402554.7
CDS-3UTR TCA 90 bp CACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAAGTTAATGGCCCGAGTCTaGCTTAAATCATCTTCTAAC +
Preference number: 4 (lower is better)
Translates to: HPGTSHSPFLTQRDGPWKLMARV*LKSSSN
Trigger: GTTAGAAGATGATTTAAGTCAGACTCGGGCCATTAA...CTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR TCA 90 bp TTCCTGACTCTTTGCCAGAAACAGGCCCAAACTGTGAGGGGTGGAGTTGGGGGAAAAAGTGCAATCATGTaGAACCAACGGCACTACGGC +
Preference number: 4 (lower is better)
Translates to: FLTLCQKQAQTVRGGVGGKSAIM*NQRHYG
Trigger: GCCGTAGTGCCGTTGGTTTCACATGATTGCACTTTT...TCCCCCAACTCCACCCCTCACAGTTTGGGCCTGTTTCTGGCAAAGAGTCAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
CDS-3UTR GCA 90 bp TTCCTGACTCTTTGCCAGAAACAGGCCCAAACTGTGAGGGGTGGAGTTGGGGGAACCTTCCTGACTCTTTaGCAGAAACAGGCCCAAACT +
Preference number: 4 (lower is better)
Translates to: FLTLCQKQAQTVRGGVGGTFLTL*QKQAQT
Trigger: AGTTTGGGCCTGTTTCTGGCAAAGAGTCAGGAAGGT...TCCCCCAACTCCACCCCTCACAGTTTGGGCCTGTTTCTGGCAAAGAGTCAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
CDS-3UTR CCA 90 bp CAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAAGAGAAAACAAAACTATTGTTGCCCTTTTaGCTCGCTCCAGGTCGTCGT +
Preference number: 4 (lower is better)
Translates to: QPLTLPNTTGRPLEEKTKLLLPF*LAPGRR
Trigger: ACGACGACCTGGAGCGAGCCAAAAGGGCAACAATAG...TTTTGTTTTCTCTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR CCA 90 bp CAAAAACACTCCAAAGATGTCGTTGAACTGAAGGACGGGAAGGCTGGCGAGAGGCCAAACTGTGAGGGGTaGAGTTGGGGGACACATGAT +
Preference number: 4 (lower is better)
Translates to: QKHSKDVVELKDGKAGERPNCEG*SWGTHD
Trigger: ATCATGTGTCCCCCAACTCCACCCCTCACAGTTTGG...CCTCTCGCCAGCCTTCCCGTCCTTCAGTTCAACGACATCTTTGGAGTGTTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR CCA 90 bp CAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAAGAGAAAACAAAACCAAACTGTGAGGGGTaGAGTTGGGGGACACATGAT +
Preference number: 4 (lower is better)
Translates to: QPLTLPNTTGRPLEEKTKPNCEG*SWGTHD
Trigger: ATCATGTGTCCCCCAACTCCACCCCTCACAGTTTGG...TTTTGTTTTCTCTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR CCA 90 bp CAAAAACACTCCAAAGATGTCGTTGAACTGAAGGACGGGAAGGCTGGCGAGAGGGGCATTGTGCTGCTCTaGGAGGCAAGTCCATGGAAT +
Preference number: 4 (lower is better)
Translates to: QKHSKDVVELKDGKAGERGIVLL*EASPWN
Trigger: ATTCCATGGACTTGCCTCCCAGAGCAGCACAATGCC...CCTCTCGCCAGCCTTCCCGTCCTTCAGTTCAACGACATCTTTGGAGTGTTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR TCA 90 bp TTCCTGACTCTTTGCCAGAAACAGGCCCAAACTGTGAGGGGTGGAGTTGGGGGATGGTATAGCTTTCGGTaGAGGAAAAGTGTTCTCCGT +
Preference number: 4 (lower is better)
Translates to: FLTLCQKQAQTVRGGVGGWYSFR*RKSVLR
Trigger: ACGGAGAACACTTTTCCTTCACCGAAAGCTATACCA...TCCCCCAACTCCACCCCTCACAGTTTGGGCCTGTTTCTGGCAAAGAGTCAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
CDS-3UTR CCA 90 bp TTCCTGACTCTTTGCCAGAAACAGGCCCAAACTGTGAGGGGTGGAGTTGGGGGATCATCCCGAGCTTCCTaGAAGCTTTGCTTATACTTC +
Preference number: 4 (lower is better)
Translates to: FLTLCQKQAQTVRGGVGGSSRAS*KLCLYF
Trigger: GAAGTATAAGCAAAGCTTCCAGGAAGCTCGGGATGA...TCCCCCAACTCCACCCCTCACAGTTTGGGCCTGTTTCTGGCAAAGAGTCAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
CDS-3UTR TCA 90 bp TTCCTGACTCTTTGCCAGAAACAGGCCCAAACTGTGAGGGGTGGAGTTGGGGGATATCTTCACCATCCATaGTCAAGAAAGCCTCCAATG +
Preference number: 4 (lower is better)
Translates to: FLTLCQKQAQTVRGGVGGYLHHP*SRKPPM
Trigger: CATTGGAGGCTTTCTTGATCATGGATGGTGAAGATA...TCCCCCAACTCCACCCCTCACAGTTTGGGCCTGTTTCTGGCAAAGAGTCAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
CDS-3UTR TCA 90 bp CAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAAGAGAAAACAAAAGAAAGATGTATGCCCTaGTCGAGAGAACTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: QPLTLPNTTGRPLEEKTKERCMP*SRELCA
Trigger: GGCACAAAGTTCTCTCGATCAGGGCATACATCTTTC...TTTTGTTTTCTCTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334527.12
CDS-3UTR TCA 90 bp CAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAAGAGAAAACAAAAAAAAGTGCAATCATGTaGAACCAACGGCACTACGGC +
Preference number: 4 (lower is better)
Translates to: QPLTLPNTTGRPLEEKTKKSAIM*NQRHYG
Trigger: GCCGTAGTGCCGTTGGTTTCACATGATTGCACTTTT...TTTTGTTTTCTCTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTG
50% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR GCA 90 bp CAAAAACACTCCAAAGATGTCGTTGAACTGAAGGACGGGAAGGCTGGCGAGAGGATCGAGAGAACTTTGTaGCATTGCCATTCAGCACCC +
Preference number: 4 (lower is better)
Translates to: QKHSKDVVELKDGKAGERIERTL*HCHSAP
Trigger: GGGTGCTGAATGGCAATGGCACAAAGTTCTCTCGAT...CCTCTCGCCAGCCTTCCCGTCCTTCAGTTCAACGACATCTTTGGAGTGTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334527.12
CDS-3UTR GCA 90 bp TTCCTGACTCTTTGCCAGAAACAGGCCCAAACTGTGAGGGGTGGAGTTGGGGGAACGTATGTATCACCTTaGGACCCACAAAAGTGCAAT +
Preference number: 4 (lower is better)
Translates to: FLTLCQKQAQTVRGGVGGTYVSP*DPQKCN
Trigger: ATTGCACTTTTGTGGGTCGCAAGGTGATACATACGT...TCCCCCAACTCCACCCCTCACAGTTTGGGCCTGTTTCTGGCAAAGAGTCAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
CDS-3UTR CCA 90 bp CAAAAACACTCCAAAGATGTCGTTGAACTGAAGGACGGGAAGGCTGGCGAGAGGTGGGAGGCAAGTCCATaGAATGGTAGCTGCTTAAGT +
Preference number: 4 (lower is better)
Translates to: QKHSKDVVELKDGKAGERWEASP*NGSCLS
Trigger: ACTTAAGCAGCTACCATTCCATGGACTTGCCTCCCA...CCTCTCGCCAGCCTTCCCGTCCTTCAGTTCAACGACATCTTTGGAGTGTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR CCA 90 bp CAAAAACACTCCAAAGATGTCGTTGAACTGAAGGACGGGAAGGCTGGCGAGAGGCAACGGGACGGCCCTTaGAAGAGAAAACAAAAACAC +
Preference number: 4 (lower is better)
Translates to: QKHSKDVVELKDGKAGERQRDGP*KRKQKH
Trigger: GTGTTTTTGTTTTCTCTTCCAAGGGCCGTCCCGTTG...CCTCTCGCCAGCCTTCCCGTCCTTCAGTTCAACGACATCTTTGGAGTGTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR GCA 90 bp TTCCTGACTCTTTGCCAGAAACAGGCCCAAACTGTGAGGGGTGGAGTTGGGGGAGCTTCCTGGAAGCTTTaGTTATACTTCAAGGAAAGT +
Preference number: 4 (lower is better)
Translates to: FLTLCQKQAQTVRGGVGGASWKL*LYFKES
Trigger: ACTTTCCTTGAAGTATAAGCAAAGCTTCCAGGAAGC...TCCCCCAACTCCACCCCTCACAGTTTGGGCCTGTTTCTGGCAAAGAGTCAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
CDS-3UTR CCA 90 bp CAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAAGAGAAAACAAAAAAAGAAAGTGATGCTTaGACGGCGGAGTCCATCTTT +
Preference number: 4 (lower is better)
Translates to: QPLTLPNTTGRPLEEKTKKESDA*TAESIF
Trigger: AAAGATGGACTCCGCCGTCCAAGCATCACTTTCTTT...TTTTGTTTTCTCTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTG
49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR GCA 90 bp CAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAAGAGAAAACAAAAACGTATGTATCACCTTaGGACCCACAAAAGTGCAAT +
Preference number: 4 (lower is better)
Translates to: QPLTLPNTTGRPLEEKTKTYVSP*DPQKCN
Trigger: ATTGCACTTTTGTGGGTCGCAAGGTGATACATACGT...TTTTGTTTTCTCTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR TCA 90 bp ATGAAATGTATATTCTCCAGGGTAAAATCAGGGACAGAGATCAACCAAAACACTAGCTGGCAAAGAAAGTaGTGCTTGGACGGCGGAGTC +
Preference number: 4 (lower is better)
Translates to: MKCIFSRVKSGTEINQNTSWQRK*CLDGGV
Trigger: GACTCCGCCGTCCAAGCATCACTTTCTTTGCCAGCT...AGTGTTTTGGTTGATCTCTGTCCCTGATTTTACCCTGGAGAATATACATTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582277.5
CDS-3UTR GCA 90 bp CAGGGTAAAATCAGGGACAGAGATCAACCAAAACACTCCACTGCAAGGATAAGAGAGTTGTACCTGCTCTaGCTTTGTCGAAGAAAGATG +
Preference number: 4 (lower is better)
Translates to: QGKIRDRDQPKHSTARIRELYLL*LCRRKM
Trigger: CATCTTTCTTCGACAAAGGCAGAGCAGGTACAACTC...TCTTATCCTTGCAGTGGAGTGTTTTGGTTGATCTCTGTCCCTGATTTTACCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582277.5
CDS-3UTR GCA 90 bp ATGAAATGTATATTCTCCAGGGTAAAATCAGGGACAGAGATCAACCAAAACACTAGAGCCTATTCAGAGTaGACCGTGTGTCGAATCTGC +
Preference number: 4 (lower is better)
Translates to: MKCIFSRVKSGTEINQNTRAYSE*TVCRIC
Trigger: GCAGATTCGACACACGGTGCACTCTGAATAGGCTCT...AGTGTTTTGGTTGATCTCTGTCCCTGATTTTACCCTGGAGAATATACATTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582277.5
CDS-3UTR CCA 90 bp ATGTATATTCTCCAGGGTAAAATCAGGGACAGAGATCAACCAAAACACTCCACTAAAGAAAGTGATGCTTaGACGGCGGAGTCCATCTTT +
Preference number: 4 (lower is better)
Translates to: MYILQGKIRDRDQPKHSTKESDA*TAESIF
Trigger: AAAGATGGACTCCGCCGTCCAAGCATCACTTTCTTT...AGTGGAGTGTTTTGGTTGATCTCTGTCCCTGATTTTACCCTGGAGAATATACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582277.5
CDS-3UTR TCA 90 bp ATGAAATGTATATTCTCCAGGGTAAAATCAGGGACAGAGATCAACCAAAACACTGAAAGATGTATGCCCTaGTCGAGAGAACTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: MKCIFSRVKSGTEINQNTERCMP*SRELCA
Trigger: GGCACAAAGTTCTCTCGATCAGGGCATACATCTTTC...AGTGTTTTGGTTGATCTCTGTCCCTGATTTTACCCTGGAGAATATACATTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582277.5
CDS-3UTR GCA 90 bp AAATCCTTAATGAAATGTATATTCTCCAGGGTAAAATCAGGGACAGAGATCAACATCGAGAGAACTTTGTaGCATTGCCATTCAGCACCC +
Preference number: 4 (lower is better)
Translates to: KSLMKCIFSRVKSGTEINIERTL*HCHSAP
Trigger: GGGTGCTGAATGGCAATGGCACAAAGTTCTCTCGAT...GTTGATCTCTGTCCCTGATTTTACCCTGGAGAATATACATTTCATTAAGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582277.5
CDS-3UTR GCA 90 bp ATGTATATTCTCCAGGGTAAAATCAGGGACAGAGATCAACCAAAACACTCCACTTCGAAGAAAGATGTATaGCCTGATCGAGAGAACTTT +
Preference number: 4 (lower is better)
Translates to: MYILQGKIRDRDQPKHSTSKKDV*PDRENF
Trigger: AAAGTTCTCTCGATCAGGGCATACATCTTTCTTCGA...AGTGGAGTGTTTTGGTTGATCTCTGTCCCTGATTTTACCCTGGAGAATATACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582277.5
CDS-3UTR GCA 90 bp TTAATGAAATGTATATTCTCCAGGGTAAAATCAGGGACAGAGATCAACCAAAACACCGTGTGTCGAATCTaGTCCTTTACACATGTGCCA +
Preference number: 4 (lower is better)
Translates to: LMKCIFSRVKSGTEINQNTVCRI*SFTHVP
Trigger: TGGCACATGTGTAAAGGAGCAGATTCGACACACGGT...GTTTTGGTTGATCTCTGTCCCTGATTTTACCCTGGAGAATATACATTTCATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582277.5
CDS-3UTR TCA 90 bp AAATCCTTAATGAAATGTATATTCTCCAGGGTAAAATCAGGGACAGAGATCAACTGGTATAGCTTTCGGTaGAGGAAAAGTGTTCTCCGT +
Preference number: 4 (lower is better)
Translates to: KSLMKCIFSRVKSGTEINWYSFR*RKSVLR
Trigger: ACGGAGAACACTTTTCCTTCACCGAAAGCTATACCA...GTTGATCTCTGTCCCTGATTTTACCCTGGAGAATATACATTTCATTAAGGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582277.5
CDS-3UTR TCA 90 bp ATGAAATGTATATTCTCCAGGGTAAAATCAGGGACAGAGATCAACCAAAACACTATGTGCCATAATTATTaGGGACGGCAGAAAATCCCA +
Preference number: 4 (lower is better)
Translates to: MKCIFSRVKSGTEINQNTMCHNY*GRQKIP
Trigger: TGGGATTTTCTGCCGTCCTCAATAATTATGGCACAT...AGTGTTTTGGTTGATCTCTGTCCCTGATTTTACCCTGGAGAATATACATTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582277.5
CDS-3UTR GCA 90 bp AAATCCTTAATGAAATGTATATTCTCCAGGGTAAAATCAGGGACAGAGATCAACACCAAAACACTCCACTaGAAGGATAAGAGCCTATTC +
Preference number: 4 (lower is better)
Translates to: KSLMKCIFSRVKSGTEINTKTLH*KDKSLF
Trigger: GAATAGGCTCTTATCCTTGCAGTGGAGTGTTTTGGT...GTTGATCTCTGTCCCTGATTTTACCCTGGAGAATATACATTTCATTAAGGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582277.5
CDS CCA 90 bp GGGGGTAGGAGGAGGCGGGCTGGGCGCGCCGCTGCCACCTCCGACTaGGCCACTCCTTGCGCCGCCAGCGCCCCAGCCCACGGTGCCACG +
Preference number: 5 (lower is better)
Translates to: GGRRRRAGRAAATSD*ATPCAASAPAHGAT
Trigger: CGTGGCACCGTGGGCTGGGGCGCTGGCGGCGCAAGGAGTGGCCCAGTCGGAGGTGGCAGCGGCGCGCCCAGCCCGCCTCCTCCTACCCCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580012.1
CDS GCA 90 bp CTCCGACTGGGCCACTCCTTGCGCCGCCAGCGCCCCAGCCCACGGTaGCACGTCCCGGCCTCCGTCACCGCCAGCCCTCACCCTACCCGG +
Preference number: 5 (lower is better)
Translates to: LRLGHSLRRQRPSPR*HVPASVTASPHPTR
Trigger: CCGGGTAGGGTGAGGGCTGGCGGTGACGGAGGCCGGGACGTGGCACCGTGGGCTGGGGCGCTGGCGGCGCAAGGAGTGGCCCAGTCGGAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580012.1
CDS-3UTR CAA 90 bp ATGCAGCCTGCCCTCTGCCAGCCGTGCGGAGGCAGACGGAGGGGCACGGGGCTGGGGCTCAGACGGGCATaGTGCTGCTCTGGGAGGCAA +
Preference number: 5 (lower is better)
Translates to: MQPALCQPCGGRRRGTGLGLRRA*CCSGRQ
Trigger: TTGCCTCCCAGAGCAGCACAATGCCCGTCTGAGCCC...CAGCCCCGTGCCCCTCCGTCTGCCTCCGCACGGCTGGCAGAGGGCAGGCTGCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
CDS-3UTR CAA 90 bp ATGCAGCCTGCCCTCTGCCAGCCGTGCGGAGGCAGACGGAGGGGCACGGGGCTGGTGTTCTCCGTTCCTTaGCCAACAGGGGTAGCTGGC +
Preference number: 5 (lower is better)
Translates to: MQPALCQPCGGRRRGTGLVFSVP*PTGVAG
Trigger: GCCAGCTACCCCTGTTGGCAAAGGAACGGAGAACAC...CAGCCCCGTGCCCCTCCGTCTGCCTCCGCACGGCTGGCAGAGGGCAGGCTGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
CDS-3UTR CAA 90 bp AGGGACAGCCGCCGCTGTTCAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGACTATTGTTGCCCTTTaGGCTCGCTCCAGGTCGTCG +
Preference number: 5 (lower is better)
Translates to: RDSRRCSVHPGAGTGPPWTIVAL*ARSRSS
Trigger: CGACGACCTGGAGCGAGCCAAAAGGGCAACAATAGT...CCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTGAACAGCGGCGGCTGTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR CAA 90 bp ATGCAGCCTGCCCTCTGCCAGCCGTGCGGAGGCAGACGGAGGGGCACGGGGCTGACTATTGTTGCCCTTTaGGCTCGCTCCAGGTCGTCG +
Preference number: 5 (lower is better)
Translates to: MQPALCQPCGGRRRGTGLTIVAL*ARSRSS
Trigger: CGACGACCTGGAGCGAGCCAAAAGGGCAACAATAGT...CAGCCCCGTGCCCCTCCGTCTGCCTCCGCACGGCTGGCAGAGGGCAGGCTGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
CDS-3UTR CAA 90 bp AAGGATGCACAGGGACAGCCGCCGCTGTTCAGTCCACCCCGGAGCTGGCACCGGGGGCTCAGACGGGCATaGTGCTGCTCTGGGAGGCAA +
Preference number: 5 (lower is better)
Translates to: KDAQGQPPLFSPPRSWHRGLRRA*CCSGRQ
Trigger: TTGCCTCCCAGAGCAGCACAATGCCCGTCTGAGCCC...CCGGTGCCAGCTCCGGGGTGGACTGAACAGCGGCGGCTGTCCCTGTGCATCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR CAA 90 bp AGGGACAGCCGCCGCTGTTCAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGGAGAACTTTGTGCCATaGCCATTCAGCACCCCACAG +
Preference number: 5 (lower is better)
Translates to: RDSRRCSVHPGAGTGPPWENFVP*PFSTPQ
Trigger: CTGTGGGGTGCTGAATGGCAATGGCACAAAGTTCTC...CCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTGAACAGCGGCGGCTGTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334527.12
CDS-3UTR CAA 90 bp ATGCAGCCTGCCCTCTGCCAGCCGTGCGGAGGCAGACGGAGGGGCACGGGGCTGAACCTTCCTGACTCTTaGCCAGAAACAGGCCCAAAC +
Preference number: 5 (lower is better)
Translates to: MQPALCQPCGGRRRGTGLNLPDS*PETGPN
Trigger: GTTTGGGCCTGTTTCTGGCAAAGAGTCAGGAAGGTT...CAGCCCCGTGCCCCTCCGTCTGCCTCCGCACGGCTGGCAGAGGGCAGGCTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
CDS-3UTR CAA 90 bp ATGCAGCCTGCCCTCTGCCAGCCGTGCGGAGGCAGACGGAGGGGCACGGGGCTGGTGATGCTTGGTCCTTaGCAAAATTCCTGCAAGCTG +
Preference number: 5 (lower is better)
Translates to: MQPALCQPCGGRRRGTGLVMLGP*QNSCKL
Trigger: CAGCTTGCAGGAATTTTGCAAAGGACCAAGCATCAC...CAGCCCCGTGCCCCTCCGTCTGCCTCCGCACGGCTGGCAGAGGGCAGGCTGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000402554.7
CDS-3UTR CAA 90 bp GATGTCGTTGAACTGAAGGACGGGAAGGCTGGCGAGAGGCTGCCCGCCTCCCTCGTGTTCTCCGTTCCTTaGCCAACAGGGGTAGCTGGC +
Preference number: 5 (lower is better)
Translates to: DVVELKDGKAGERLPASLVFSVP*PTGVAG
Trigger: GCCAGCTACCCCTGTTGGCAAAGGAACGGAGAACAC...GAGGGAGGCGGGCAGCCTCTCGCCAGCCTTCCCGTCCTTCAGTTCAACGACATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR CAA 90 bp CAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGAACCAGCCACTCACCCTTCAACCTTCCTGACTCTTaGCCAGAAACAGGCCCAAAC +
Preference number: 5 (lower is better)
Translates to: QSTPELAPAHPGTSHSPFNLPDS*PETGPN
Trigger: GTTTGGGCCTGTTTCTGGCAAAGAGTCAGGAAGGTT...GAAGGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS GCA 90 bp ACCATGCAGCGCAGCCACAGGAAGCAGCAAGAGGGGGAGGGAGTGTaGAGCCTGGAACCTCTCTCAGGAGCCACTTCAGCCTTTCCACCT +
Preference number: 5 (lower is better)
Translates to: TMQRSHRKQQEGEGV*SLEPLSGATSAFPP
Trigger: AGGTGGAAAGGCTGAAGTGGCTCCTGAGAGAGGTTCCAGGCTGCACACTCCCTCCCCCTCTTGCTGCTTCCTGTGGCTGCGCTGCATGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578172.1
CDS CCA 90 bp GGCCAGTGGCCTGGGACAATGGACTGGTACAGCTCGTTCAGGCTCTaGGGCTCTGCTTCCCTGGGTGAAGCTGTGCTCTGGCTGATGAGA +
Preference number: 5 (lower is better)
Translates to: GQWPGTMDWYSSFRL*GSASLGEAVLWLMR
Trigger: TCTCATCAGCCAGAGCACAGCTTCACCCAGGGAAGCAGAGCCCCAGAGCCTGAACGAGCTGTACCAGTCCATTGTCCCAGGCCACTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579150.1
CDS CCA 90 bp CCACTGGGTGACAGAGCAAGCTTCAAGGCCAGTGGCCTGGGACAATaGACTGGTACAGCTCGTTCAGGCTCTGGGGCTCTGCTTCCCTGG +
Preference number: 5 (lower is better)
Translates to: PLGDRASFKASGLGQ*TGTARSGSGALLPW
Trigger: CCAGGGAAGCAGAGCCCCAGAGCCTGAACGAGCTGTACCAGTCCATTGTCCCAGGCCACTGGCCTTGAAGCTTGCTCTGTCACCCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579150.1
CDS-3UTR CAA 90 bp GTTCAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGAACCAGCCACTCACCCCTGATCGAGAGAACTTaGTGCCATTGCCATTCAGCA +
Preference number: 5 (lower is better)
Translates to: VQSTPELAPAHPGTSHSPLIERT*CHCHSA
Trigger: TGCTGAATGGCAATGGCACAAAGTTCTCTCGATCAG...GGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334527.12
CDS-3UTR CAA 90 bp CAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGAACCAGCCACTCACCCTTCACAACGGGACGGCCCTaGGAAGAGAAAACAAAAACA +
Preference number: 5 (lower is better)
Translates to: QSTPELAPAHPGTSHSPFTTGRP*EEKTKT
Trigger: TGTTTTTGTTTTCTCTTCCAAGGGCCGTCCCGTTGT...GAAGGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS TCA 90 bp AACCCGAGCCCGTTGGTGACACTTTGCCGAACTCCAGGGGGAGGATaGTTAGCAGTTCCGGGCGGGAGTCAGGAGAATGCCAATCCGAGC +
Preference number: 5 (lower is better)
Translates to: NPSPLVTLCRTPGGG*LAVPGGSQENANPS
Trigger: GCTCGGATTGGCATTCTCCTGACTCCCGCCCGGAACTGCTAATCATCCTCCCCCTGGAGTTCGGCAAAGTGTCACCAACGGGCTCGGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580012.1
CDS TCA 90 bp GGACTGGTACAGCTCGTTCAGGCTCTGGGGCTCTGCTTCCCTGGGTaGAGCTGTGCTCTGGCTGATGAGATCACAGACAGGGAGGGGATG +
Preference number: 5 (lower is better)
Translates to: GLVQLVQALGLCFPG*SCALADEITDREGM
Trigger: CATCCCCTCCCTGTCTGTGATCTCATCAGCCAGAGCACAGCTTCACCCAGGGAAGCAGAGCCCCAGAGCCTGAACGAGCTGTACCAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579150.1
CDS-3UTR CAA 90 bp ATGCAGCCTGCCCTCTGCCAGCCGTGCGGAGGCAGACGGAGGGGCACGGGGCTGTTCATATTTCAGTCTTaGGTTATCAGCCTGCAAGTC +
Preference number: 5 (lower is better)
Translates to: MQPALCQPCGGRRRGTGLFIFQS*VISLQV
Trigger: GACTTGCAGGCTGATAACCAAAGACTGAAATATGAA...CAGCCCCGTGCCCCTCCGTCTGCCTCCGCACGGCTGGCAGAGGGCAGGCTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
CDS-3UTR CAA 90 bp AAGGATGCACAGGGACAGCCGCCGCTGTTCAGTCCACCCCGGAGCTGGCACCGGGTGATGCTTGGTCCTTaGCAAAATTCCTGCAAGCTG +
Preference number: 5 (lower is better)
Translates to: KDAQGQPPLFSPPRSWHRVMLGP*QNSCKL
Trigger: CAGCTTGCAGGAATTTTGCAAAGGACCAAGCATCAC...CCGGTGCCAGCTCCGGGGTGGACTGAACAGCGGCGGCTGTCCCTGTGCATCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334527.12
CDS TCA 90 bp GACAACCAGGCAGGCCCCACAAATGCCTGCAGCTCTCAGCACGTGTaGACCTCAGATTCCTGGCCTCACACATCACAGTGGCAGGCAAGC +
Preference number: 5 (lower is better)
Translates to: DNQAGPTNACSSQHV*TSDSWPHTSQWQAS
Trigger: GCTTGCCTGCCACTGTGATGTGTGAGGCCAGGAATCTGAGGTTCACACGTGCTGAGAGCTGCAGGCATTTGTGGGGCCTGCCTGGTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578172.1
CDS TCA 90 bp GGTGCCAAGACAAAACAGTCCTGGTCCTGTGTCTCAGGCCTCAGCTaGTCAGATCCACGGCAGCATACGGGGCCCACGCTGAACTTGCTG +
Preference number: 5 (lower is better)
Translates to: GAKTKQSWSCVSGLS*SDPRQHTGPTLNLL
Trigger: CAGCAAGTTCAGCGTGGGCCCCGTATGCTGCCGTGGATCTGATCAGCTGAGGCCTGAGACACAGGACCAGGACTGTTTTGTCTTGGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579150.1
CDS GCA 90 bp GCCAACTACGACAAGGGGCCACACTGCACCACACCTGCCCACTACTaGCCCCACCTACTCATCAGACGGCTCCAGGGAGCTAAATACAGA +
Preference number: 5 (lower is better)
Translates to: ANYDKGPHCTTPAHY*PHLLIRRLQGAKYR
Trigger: TCTGTATTTAGCTCCCTGGAGCCGTCTGATGAGTAGGTGGGGGCAGTAGTGGGCAGGTGTGGTGCAGTGTGGCCCCTTGTCGTAGTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578172.1
CDS CCA 90 bp AGATCATGCCACTGGGTGACAGAGCAAGCTTCAAGGCCAGTGGCCTaGGACAATGGACTGGTACAGCTCGTTCAGGCTCTGGGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: RSCHWVTEQASRPVA*DNGLVQLVQALGLC
Trigger: GCAGAGCCCCAGAGCCTGAACGAGCTGTACCAGTCCATTGTCCCAGGCCACTGGCCTTGAAGCTTGCTCTGTCACCCAGTGGCATGATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579150.1
CDS-3UTR CAA 90 bp GCACCGGCCCACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCCTTCCAGTGAAACTATaGTTGCCCTTTTGGCTCGCT +
Preference number: 5 (lower is better)
Translates to: APAHPGTSHSPFLTQRDGLPVKL*LPFWLA
Trigger: AGCGAGCCAAAAGGGCAACAATAGTTTCACTGGAAG...GCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR CAA 90 bp AGGGCAGGAGCCCCCACCTGGAGGCTAGGCACTCACACACTGAGAGGCAGCATAGAGAACTTTGTGCCATaGCCATTCAGCACCCCACAG +
Preference number: 5 (lower is better)
Translates to: RAGAPTWRLGTHTLRGSIENFVP*PFSTPQ
Trigger: CTGTGGGGTGCTGAATGGCAATGGCACAAAGTTCTC...TATGCTGCCTCTCAGTGTGTGAGTGCCTAGCCTCCAGGTGGGGGCTCCTGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402554.7
CDS-3UTR CAA 90 bp GCACCGGCCCACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCACAACGGGACGGCCCTaGGAAGAGAAAACAAAAACA +
Preference number: 5 (lower is better)
Translates to: APAHPGTSHSPFLTQRDGTTGRP*EEKTKT
Trigger: TGTTTTTGTTTTCTCTTCCAAGGGCCGTCCCGTTGT...GCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS TCA 90 bp CCATCCATGATCAAGAAAGCCTGGTCCTGTGTCTCAGGCCTCAGCTaGTCAGATCCACGGCAGCATACGGGGCCCACGCTGAACTTGCTG +
Preference number: 5 (lower is better)
Translates to: PSMIKKAWSCVSGLS*SDPRQHTGPTLNLL
Trigger: CAGCAAGTTCAGCGTGGGCCCCGTATGCTGCCGTGGATCTGATCAGCTGAGGCCTGAGACACAGGACCAGGCTTTCTTGATCATGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580237.5
ENST00000582812.5
CDS GCA 90 bp CTGGCCTCACACATCACAGTGGCAGGCAAGCCCCTAAACCTGTACTaGAGACAGTGCCCGGAACCCAGCAGAAAGGGAGCACCATTGGAT +
Preference number: 5 (lower is better)
Translates to: LASHITVAGKPLNLY*RQCPEPSRKGAPLD
Trigger: ATCCAATGGTGCTCCCTTTCTGCTGGGTTCCGGGCACTGTCTGCAGTACAGGTTTAGGGGCTTGCCTGCCACTGTGATGTGTGAGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578172.1
CDS-3UTR CAA 90 bp CAGTCCACCCCGGAGCTGGCACCGGCCCACCCTGGAACCAGCCACTCACCCTTCTTCATATTTCAGTCTTaGGTTATCAGCCTGCAAGTC +
Preference number: 5 (lower is better)
Translates to: QSTPELAPAHPGTSHSPFFIFQS*VISLQV
Trigger: GACTTGCAGGCTGATAACCAAAGACTGAAATATGAA...GAAGGGTGAGTGGCTGGTTCCAGGGTGGGCCGGTGCCAGCTCCGGGGTGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR CAA 90 bp AGGGCAGGAGCCCCCACCTGGAGGCTAGGCACTCACACACTGAGAGGCAGCATACCAGTGAAACTATTGTaGCCCTTTTGGCTCGCTCCA +
Preference number: 5 (lower is better)
Translates to: RAGAPTWRLGTHTLRGSIPVKLL*PFWLAP
Trigger: TGGAGCGAGCCAAAAGGGCAACAATAGTTTCACTGG...TATGCTGCCTCTCAGTGTGTGAGTGCCTAGCCTCCAGGTGGGGGCTCCTGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380025.8
ENST00000402554.7
CDS-3UTR CAA 90 bp GGCCCACCCTGGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGCCGTTTACTGCCCCTTaGTCGAAGAAAGATGTATGC +
Preference number: 5 (lower is better)
Translates to: GPPWNQPLTLPNTTGRPLPFTAP*SKKDVC
Trigger: GCATACATCTTTCTTCGACAAAGGGGCAGTAAACGG...CAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCCAGGGTGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334527.12
CDS-3UTR CAA 90 bp GATGTCGTTGAACTGAAGGACGGGAAGGCTGGCGAGAGGCTGCCCGCCTCCCTCCACGTATGTATCACCTaGCGACCCACAAAAGTGCAA +
Preference number: 5 (lower is better)
Translates to: DVVELKDGKAGERLPASLHVCIT*RPTKVQ
Trigger: TTGCACTTTTGTGGGTCGCAAGGTGATACATACGTG...GAGGGAGGCGGGCAGCCTCTCGCCAGCCTTCCCGTCCTTCAGTTCAACGACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS GCA 90 bp CACATCACAGTGGCAGGCAAGCCCCTAAACCTGTACTGCAGACAGTaGCCGGAACCCAGCAGAAAGGGAGCACCATTGGATGCCAAGAAG +
Preference number: 5 (lower is better)
Translates to: HITVAGKPLNLYCRQ*PEPSRKGAPLDAKK
Trigger: CTTCTTGGCATCCAATGGTGCTCCCTTTCTGCTGGGTTCCGGGCACTGTCTGCAGTACAGGTTTAGGGGCTTGCCTGCCACTGTGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578172.1
CDS-3UTR CAA 90 bp TTCCTGACTCTTTGCCAGAAACAGGCCCAAACTGTGAGGGGTGGAGTTGGGGGAGTGTTCTCCGTTCCTTaGCCAACAGGGGTAGCTGGC +
Preference number: 5 (lower is better)
Translates to: FLTLCQKQAQTVRGGVGGVFSVP*PTGVAG
Trigger: GCCAGCTACCCCTGTTGGCAAAGGAACGGAGAACAC...TCCCCCAACTCCACCCCTCACAGTTTGGGCCTGTTTCTGGCAAAGAGTCAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
CDS-3UTR CAA 90 bp AGGGCAGGAGCCCCCACCTGGAGGCTAGGCACTCACACACTGAGAGGCAGCATACACGTATGTATCACCTaGCGACCCACAAAAGTGCAA +
Preference number: 5 (lower is better)
Translates to: RAGAPTWRLGTHTLRGSIHVCIT*RPTKVQ
Trigger: TTGCACTTTTGTGGGTCGCAAGGTGATACATACGTG...TATGCTGCCTCTCAGTGTGTGAGTGCCTAGCCTCCAGGTGGGGGCTCCTGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380025.8
ENST00000402554.7
CDS TCA 90 bp GTTAGAGAATTGAGCCTTTGGGAATCCTGGGGAACCAGGACCACATaGCCTGTTTGGCAACTGCCGCACACTGGCCACGGAAGCCACAGT +
Preference number: 5 (lower is better)
Translates to: VRELSLWESWGTRTT*PVWQLPHTGHGSHS
Trigger: ACTGTGGCTTCCGTGGCCAGTGTGCGGCAGTTGCCAAACAGGTCATGTGGTCCTGGTTCCCCAGGATTCCCAAAGGCTCAATTCTCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578172.1
CDS TCA 90 bp CCAAGGGGCACTGGCTGCCTGGAAAGCACCAGCTGGTTAGAGAATTaGGCCTTTGGGAATCCTGGGGAACCAGGACCACATGACCTGTTT +
Preference number: 5 (lower is better)
Translates to: PRGTGCLESTSWLEN*AFGNPGEPGPHDLF
Trigger: AAACAGGTCATGTGGTCCTGGTTCCCCAGGATTCCCAAAGGCTCAATTCTCTAACCAGCTGGTGCTTTCCAGGCAGCCAGTGCCCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578172.1
CDS GCA 90 bp ACTAGCAATTTGGGAGATAAAGCCAACTACGACAAGGGGCCACACTaGACCACACCTGCCCACTACTGCCCCCACCTACTCATCAGACGG +
Preference number: 5 (lower is better)
Translates to: TSNLGDKANYDKGPH*TTPAHYCPHLLIRR
Trigger: CCGTCTGATGAGTAGGTGGGGGCAGTAGTGGGCAGGTGTGGTGCAGTGTGGCCCCTTGTCGTAGTTGGCTTTATCTCCCAAATTGCTAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578172.1
CDS CCA 90 bp AGCGACAGGAGGCACTTTTGGTTGCAGCATAGGCGCTGGGTGACTTaGGCCCACAGAATCATCCTGCACACAGAGTTGCAGCAGTTGGTT +
Preference number: 5 (lower is better)
Translates to: SDRRHFWLQHRRWVT*AHRIILHTELQQLV
Trigger: AACCAACTGCTGCAACTCTGTGTGCAGGATGATTCTGTGGGCCCAAGTCACCCAGCGCCTATGCTGCAACCAAAAGTGCCTCCTGTCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000582490.5
ENST00000583066.5
ENST00000584866.1
CDS-3UTR CAA 90 bp GGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAAGAGAAAAACTATTGTTGCCCTTTaGGCTCGCTCCAGGTCGTCG +
Preference number: 5 (lower is better)
Translates to: GTSHSPFLTQRDGPWKRKTIVAL*ARSRSS
Trigger: CGACGACCTGGAGCGAGCCAAAAGGGCAACAATAGT...TTTTCTCTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS TCA 90 bp TACAAAGCGACAGGAGGCACTTTTGGTTGCAGCATAGGCGCTGGGTaGCTTGGGCCCACAGAATCATCCTGCACACAGAGTTGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: YKATGGTFGCSIGAG*LGPTESSCTQSCSS
Trigger: ACTGCTGCAACTCTGTGTGCAGGATGATTCTGTGGGCCCAAGTCACCCAGCGCCTATGCTGCAACCAAAAGTGCCTCCTGTCGCTTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000582490.5
ENST00000583066.5
ENST00000584866.1
CDS GCA 90 bp AGGTGGGTGAAGCTTGAGAACCGCTTGAACCTGGGAGGTGGAAGTTaGAGTGAGCCAAGATCATGCCACTGGGTGACAGAGCAAGCTTCA +
Preference number: 5 (lower is better)
Translates to: RWVKLENRLNLGGGS*SEPRSCHWVTEQAS
Trigger: TGAAGCTTGCTCTGTCACCCAGTGGCATGATCTTGGCTCACTGCAACTTCCACCTCCCAGGTTCAAGCGGTTCTCAAGCTTCACCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579150.1
CDS CCA 90 bp GTGCGGCCTCCACAACAAGGGGTGCAGGCTCTCAAAGCCCAGCTCTaGGTCAGTATCCTGTTCATTCGTGTTAGAACACATCCTTTGTCG +
Preference number: 5 (lower is better)
Translates to: VRPPQQGVQALKAQL*VSILFIRVRTHPLS
Trigger: CGACAAAGGATGTGTTCTAACACGAATGAACAGGATACTGACCCAGAGCTGGGCTTTGAGAGCCTGCACCCCTTGTTGTGGAGGCCGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581679.1
CDS CCA 90 bp GCTCGGCACCTGGGAAGCAGGCACGGCAGCCCATGTTTCAGGAACTaGCAGAAGTGCTCACAGACTAGACAAAAACCTGATTCCAAGAAG +
Preference number: 5 (lower is better)
Translates to: ARHLGSRHGSPCFRN*QKCSQTRQKPDSKK
Trigger: CTTCTTGGAATCAGGTTTTTGTCTAGTCTGTGAGCACTTCTGCCAGTTCCTGAAACATGGGCTGCCGTGCCTGCTTCCCAGGTGCCGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583683.1
CDS CCA 90 bp TTGATACAAAGCGACAGGAGGCACTTTTGGTTGCAGCATAGGCGCTaGGTGACTTGGGCCCACAGAATCATCCTGCACACAGAGTTGCAG +
Preference number: 5 (lower is better)
Translates to: LIQSDRRHFWLQHRR*VTWAHRIILHTELQ
Trigger: CTGCAACTCTGTGTGCAGGATGATTCTGTGGGCCCAAGTCACCCAGCGCCTATGCTGCAACCAAAAGTGCCTCCTGTCGCTTTGTATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000582490.5
ENST00000583066.5
ENST00000584866.1
CDS-3UTR CAA 90 bp TTCCTGACTCTTTGCCAGAAACAGGCCCAAACTGTGAGGGGTGGAGTTGGGGGAAACCTTCCTGACTCTTaGCCAGAAACAGGCCCAAAC +
Preference number: 5 (lower is better)
Translates to: FLTLCQKQAQTVRGGVGGNLPDS*PETGPN
Trigger: GTTTGGGCCTGTTTCTGGCAAAGAGTCAGGAAGGTT...TCCCCCAACTCCACCCCTCACAGTTTGGGCCTGTTTCTGGCAAAGAGTCAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
CDS-3UTR CAA 90 bp AGGGCAGGAGCCCCCACCTGGAGGCTAGGCACTCACACACTGAGAGGCAGCATAACTTTTTCTTGCCCTTaGTCGAAGAAAGATGTATGC +
Preference number: 5 (lower is better)
Translates to: RAGAPTWRLGTHTLRGSITFSCP*SKKDVC
Trigger: GCATACATCTTTCTTCGACAAAGGGCAAGAAAAAGT...TATGCTGCCTCTCAGTGTGTGAGTGCCTAGCCTCCAGGTGGGGGCTCCTGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000402554.7
CDS GCA 90 bp CTGGGAAGCAGGCACGGCAGCCCATGTTTCAGGAACTGGCAGAAGTaGTCACAGACTAGACAAAAACCTGATTCCAAGAAGCCCTCAAGT +
Preference number: 5 (lower is better)
Translates to: LGSRHGSPCFRNWQK*SQTRQKPDSKKPSS
Trigger: ACTTGAGGGCTTCTTGGAATCAGGTTTTTGTCTAGTCTGTGAGCACTTCTGCCAGTTCCTGAAACATGGGCTGCCGTGCCTGCTTCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583683.1
CDS-3UTR CAA 90 bp GGAACCAGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAAGAGAAAACTTCCAGTGAAACTATaGTTGCCCTTTTGGCTCGCT +
Preference number: 5 (lower is better)
Translates to: GTSHSPFLTQRDGPWKRKLPVKL*LPFWLA
Trigger: AGCGAGCCAAAAGGGCAACAATAGTTTCACTGGAAG...TTTTCTCTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCTGGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS-3UTR CAA 90 bp TTCCTGACTCTTTGCCAGAAACAGGCCCAAACTGTGAGGGGTGGAGTTGGGGGACTTCCAGTGAAACTATaGTTGCCCTTTTGGCTCGCT +
Preference number: 5 (lower is better)
Translates to: FLTLCQKQAQTVRGGVGGLPVKL*LPFWLA
Trigger: AGCGAGCCAAAAGGGCAACAATAGTTTCACTGGAAG...TCCCCCAACTCCACCCCTCACAGTTTGGGCCTGTTTCTGGCAAAGAGTCAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
CDS-3UTR CAA 90 bp TTCCTGACTCTTTGCCAGAAACAGGCCCAAACTGTGAGGGGTGGAGTTGGGGGACTGATCGAGAGAACTTaGTGCCATTGCCATTCAGCA +
Preference number: 5 (lower is better)
Translates to: FLTLCQKQAQTVRGGVGGLIERT*CHCHSA
Trigger: TGCTGAATGGCAATGGCACAAAGTTCTCTCGATCAG...TCCCCCAACTCCACCCCTCACAGTTTGGGCCTGTTTCTGGCAAAGAGTCAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000402554.7
CDS TCA 90 bp TTCCAACCACGCATACAGAGACCAAGAGCCCCAGGAGAAAGGCTCTaGCAAATGTCATTTCTCCCTGTTGCACACTGTCCTACTTCGACG +
Preference number: 5 (lower is better)
Translates to: FQPRIQRPRAPGERL*QMSFLPVAHCPTST
Trigger: CGTCGAAGTAGGACAGTGTGCAACAGGGAGAAATGACATTTGTCAGAGCCTTTCTCCTGGGGCTCTTGGTCTCTGTATGCGTGGTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578172.1
CDS TCA 90 bp TGTGAGAAGGCTTCACTGCATCTGAAGTTTCAGCGGGTGGGAAGGTaGACACATGTACACCCGCACACATGCACACACACACAAACCTAC +
Preference number: 5 (lower is better)
Translates to: CEKASLHLKFQRVGR*THVHPHTCTHTQTY
Trigger: GTAGGTTTGTGTGTGTGTGCATGTGTGCGGGTGTACATGTGTTCACCTTCCCACCCGCTGAAACTTCAGATGCAGTGAAGCCTTCTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583683.1
CDS CCA 90 bp GATCATGACAAAGGTCCTTTGATACAAAGCGACAGGAGGCACTTTTaGTTGCAGCATAGGCGCTGGGTGACTTGGGCCCACAGAATCATC +
Preference number: 5 (lower is better)
Translates to: DHDKGPLIQSDRRHF*LQHRRWVTWAHRII
Trigger: GATGATTCTGTGGGCCCAAGTCACCCAGCGCCTATGCTGCAACCAAAAGTGCCTCCTGTCGCTTTGTATCAAAGGACCTTTGTCATGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000582490.5
ENST00000583066.5
ENST00000584866.1
CDS-3UTR CAA 90 bp CAAAAACACTCCAAAGATGTCGTTGAACTGAAGGACGGGAAGGCTGGCGAGAGGCCAGTGAAACTATTGTaGCCCTTTTGGCTCGCTCCA +
Preference number: 5 (lower is better)
Translates to: QKHSKDVVELKDGKAGERPVKLL*PFWLAP
Trigger: TGGAGCGAGCCAAAAGGGCAACAATAGTTTCACTGG...CCTCTCGCCAGCCTTCCCGTCCTTCAGTTCAACGACATCTTTGGAGTGTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS CCA 90 bp CAGCAACTAGGAGATGGCTCCTCAAGCAGGTTGAGGATGGGATTCTaGCATTTTCAAGTGCACCGTAAGGAACAACAGGTTCATCCCACT +
Preference number: 5 (lower is better)
Translates to: QQLGDGSSSRLRMGF*HFQVHRKEQQVHPT
Trigger: AGTGGGATGAACCTGTTGTTCCTTACGGTGCACTTGAAAATGCCAGAATCCCATCCTCAACCTGCTTGAGGAGCCATCTCCTAGTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578172.1
CDS-3UTR CAA 90 bp AGCCACTCACCCTTCCTAACACAACGGGACGGCCCTTGGAAGAGAAAACAAAAACCAGTGAAACTATTGTaGCCCTTTTGGCTCGCTCCA +
Preference number: 5 (lower is better)
Translates to: SHSPFLTQRDGPWKRKQKPVKLL*PFWLAP
Trigger: TGGAGCGAGCCAAAAGGGCAACAATAGTTTCACTGG...TTTTTGTTTTCTCTTCCAAGGGCCGTCCCGTTGTGTTAGGAAGGGTGAGTGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334527.12
ENST00000380025.8
CDS TCA 90 bp CCACAGGGCAATGTCCCAGTGCACAAGACAGGACTGAAGGAAGAGTaGTGGGGCAGGCTTGAAGATACAGATCTGGGAATCATATATGTA +
Preference number: 5 (lower is better)
Translates to: PQGNVPVHKTGLKEE*WGRLEDTDLGIIYV
Trigger: TACATATATGATTCCCAGATCTGTATCTTCAAGCCTGCCCCATCACTCTTCCTTCAGTCCTGTCTTGTGCACTGGGACATTGCCCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578172.1
CDS GCA 90 bp TTCGGCACTCCAATGCAGGCCGGCTCTAATGGGAAAAGTAAGTGGTaGAGCCCAGACTATAAAGAGAGAACCGGTAAATTTCTACATGGG +
Preference number: 5 (lower is better)
Translates to: FGTPMQAGSNGKSKW*SPDYKERTGKFLHG
Trigger: CCCATGTAGAAATTTACCGGTTCTCTCTTTATAGTCTGGGCTGCACCACTTACTTTTCCCATTAGAGCCGGCCTGCATTGGAGTGCCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578172.1
CDS-3UTR CAA 90 bp ATTCTCCAGGGTAAAATCAGGGACAGAGATCAACCAAAACACTCCACTGCAAGGGAGAACTTTGTGCCATaGCCATTCAGCACCCCACAG +
Preference number: 5 (lower is better)
Translates to: ILQGKIRDRDQPKHSTARENFVP*PFSTPQ
Trigger: CTGTGGGGTGCTGAATGGCAATGGCACAAAGTTCTC...CCTTGCAGTGGAGTGTTTTGGTTGATCTCTGTCCCTGATTTTACCCTGGAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582277.5
CDS TCA 90 bp CAATCACTCCACTGCTCCACTCTCAGGGACCACCAATATTGTGAATaGGATCATGACAAAGGTCCTTTGATACAAAGCGACAGGAGGCAC +
Preference number: 5 (lower is better)
Translates to: QSLHCSTLRDHQYCE*DHDKGPLIQSDRRH
Trigger: GTGCCTCCTGTCGCTTTGTATCAAAGGACCTTTGTCATGATCTCATTCACAATATTGGTGGTCCCTGAGAGTGGAGCAGTGGAGTGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000582490.5
ENST00000583066.5
ENST00000584866.1
CDS TCA 90 bp GCACCGTGTGTCGAATCTGCTCCTTTACACATGTGCCATAATTATTaGGGACGGCAGAAAATCCCAGCTGCTTTCAGAGATTGTGAGCGT +
Preference number: 5 (lower is better)
Translates to: APCVESAPLHMCHNY*GRQKIPAAFRDCER
Trigger: ACGCTCACAATCTCTGAAAGCAGCTGGGATTTTCTGCCGTCCTCAATAATTATGGCACATGTGTAAAGGAGCAGATTCGACACACGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582277.5
CDS CCA 90 bp CACTTCGGCACTCCAATGCAGGCCGGCTCTAATGGGAAAAGTAAGTaGTGCAGCCCAGACTATAAAGAGAGAACCGGTAAATTTCTACAT +
Preference number: 5 (lower is better)
Translates to: HFGTPMQAGSNGKSK*CSPDYKERTGKFLH
Trigger: ATGTAGAAATTTACCGGTTCTCTCTTTATAGTCTGGGCTGCACCACTTACTTTTCCCATTAGAGCCGGCCTGCATTGGAGTGCCGAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578172.1
CDS TCA 90 bp GAATCCCACAGAGCAATACGCCCAGTTAAGGTATATTGTTTTATGTaGGAAGGCTTCACTGCATCTGAAGTTTCAGCGGGTGGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: ESHRAIRPVKVYCFM*EGFTASEVSAGGKV
Trigger: CACCTTCCCACCCGCTGAAACTTCAGATGCAGTGAAGCCTTCTCACATAAAACAATATACCTTAACTGGGCGTATTGCTCTGTGGGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583683.1
CDS-3UTR CAA 90 bp GGACAGAGATCAACCAAAACACTCCACTGCAAGGATAAGAGCCTATTCAGAGTGGTACCTGCTCTGCCTTaGTCGAAGAAAGATGTATGC +
Preference number: 5 (lower is better)
Translates to: GQRSTKTLHCKDKSLFRVVPALP*SKKDVC
Trigger: GCATACATCTTTCTTCGACAAAGGCAGAGCAGGTAC...CACTCTGAATAGGCTCTTATCCTTGCAGTGGAGTGTTTTGGTTGATCTCTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582277.5
CDS-3UTR CAA 90 bp ATGAAATGTATATTCTCCAGGGTAAAATCAGGGACAGAGATCAACCAAAACACTGTGTTCTCCGTTCCTTaGCCAACAGGGGTAGCTGGC +
Preference number: 5 (lower is better)
Translates to: MKCIFSRVKSGTEINQNTVFSVP*PTGVAG
Trigger: GCCAGCTACCCCTGTTGGCAAAGGAACGGAGAACAC...AGTGTTTTGGTTGATCTCTGTCCCTGATTTTACCCTGGAGAATATACATTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582277.5
CDS GCA 90 bp AGTAATACGAATACTATTTCCACATCACGCCCTAAAATTAGTCCATaGCCACCTACACACAGCCCAAAAGAACTCAGAGTGGCTTACAAA +
Preference number: 5 (lower is better)
Translates to: SNTNTISTSRPKISP*PPTHSPKELRVAYK
Trigger: TTTGTAAGCCACTCTGAGTTCTTTTGGGCTGTGTGTAGGTGGGCATGGACTAATTTTAGGGCGTGATGTGGAAATAGTATTCGTATTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583683.1
CDS-3UTR CAA 90 bp AAATCCTTAATGAAATGTATATTCTCCAGGGTAAAATCAGGGACAGAGATCAACGTGATGCTTGGTCCTTaGCAAAATTCCTGCAAGCTG +
Preference number: 5 (lower is better)
Translates to: KSLMKCIFSRVKSGTEINVMLGP*QNSCKL
Trigger: CAGCTTGCAGGAATTTTGCAAAGGACCAAGCATCAC...GTTGATCTCTGTCCCTGATTTTACCCTGGAGAATATACATTTCATTAAGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582277.5
CDS-3UTR CAA 90 bp AAATCCTTAATGAAATGTATATTCTCCAGGGTAAAATCAGGGACAGAGATCAACCTGATCGAGAGAACTTaGTGCCATTGCCATTCAGCA +
Preference number: 5 (lower is better)
Translates to: KSLMKCIFSRVKSGTEINLIERT*CHCHSA
Trigger: TGCTGAATGGCAATGGCACAAAGTTCTCTCGATCAG...GTTGATCTCTGTCCCTGATTTTACCCTGGAGAATATACATTTCATTAAGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582277.5
CDS CCA 90 bp AAATTAGTCCATGCCCACCTACACACAGCCCAAAAGAACTCAGAGTaGCTTACAAAAATAGAGCACATGTTACCTAAGAAACTACATAAA +
Preference number: 5 (lower is better)
Translates to: KLVHAHLHTAQKNSE*LTKIEHMLPKKLHK
Trigger: TTTATGTAGTTTCTTAGGTAACATGTGCTCTATTTTTGTAAGCCACTCTGAGTTCTTTTGGGCTGTGTGTAGGTGGGCATGGACTAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583683.1
CDS CAA 90 bp GAGGCGGGCTGGGCGCGCCGCTGCCACCTCCGACTGGGCCACTCCTaGCGCCGCCAGCGCCCCAGCCCACGGTGCCACGTCCCGGCCTCC +
Preference number: 6 (lower is better)
Translates to: EAGWARRCHLRLGHS*RRQRPSPRCHVPAS
Trigger: GGAGGCCGGGACGTGGCACCGTGGGCTGGGGCGCTGGCGGCGCAAGGAGTGGCCCAGTCGGAGGTGGCAGCGGCGCGCCCAGCCCGCCTC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580012.1
CDS GCA 72 bp GGCCACTCCTTGCGCCGCCAGCGCCCCAGCCCACGGTaGCACGTCCCGGCCTCCGTCACCGCCAGCCCTCAC +
Preference number: 6 (lower is better)
Translates to: GHSLRRQRPSPR*HVPASVTASPH
Trigger: GTGAGGGCTGGCGGTGACGGAGGCCGGGACGTGGCACCGTGGGCTGGGGCGCTGGCGGCGCAAGGAGTGGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580012.1
CDS CAA 72 bp TGGGCGCGCCGCTGCCACCTCCGACTGGGCCACTCCTaGCGCCGCCAGCGCCCCAGCCCACGGTGCCACGTC +
Preference number: 6 (lower is better)
Translates to: WARRCHLRLGHS*RRQRPSPRCHV
Trigger: GACGTGGCACCGTGGGCTGGGGCGCTGGCGGCGCAAGGAGTGGCCCAGTCGGAGGTGGCAGCGGCGCGCCCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580012.1
CDS GCA 72 bp GACAAGGGGCCACACTGCACCACACCTGCCCACTACTaGCCCCACCTACTCATCAGACGGCTCCAGGGAGCT +
Preference number: 6 (lower is better)
Translates to: DKGPHCTTPAHY*PHLLIRRLQGA
Trigger: AGCTCCCTGGAGCCGTCTGATGAGTAGGTGGGGGCAGTAGTGGGCAGGTGTGGTGCAGTGTGGCCCCTTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578172.1
CDS GCA 72 bp AGCCAACTACGACAAGGGGCCACACTGCACCACACCTaGCCACTACTGCCCCCACCTACTCATCAGACGGCT +
Preference number: 6 (lower is better)
Translates to: SQLRQGATLHHT*PLLPPPTHQTA
Trigger: AGCCGTCTGATGAGTAGGTGGGGGCAGTAGTGGGCAGGTGTGGTGCAGTGTGGCCCCTTGTCGTAGTTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578172.1
CDS TCA 72 bp CCGTTGGTGACACTTTGCCGAACTCCAGGGGGAGGATaGTTAGCAGTTCCGGGCGGGAGTCAGGAGAATGCC +
Preference number: 6 (lower is better)
Translates to: PLVTLCRTPGGG*LAVPGGSQENA
Trigger: GGCATTCTCCTGACTCCCGCCCGGAACTGCTAATCATCCTCCCCCTGGAGTTCGGCAAAGTGTCACCAACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580012.1
CDS CCA 72 bp ACAGGAAGCAGCAAGAGGGGGAGGGAGTGTGCAGCCTaGAACCTCTCTCAGGAGCCACTTCAGCCTTTCCAC +
Preference number: 6 (lower is better)
Translates to: TGSSKRGRECAA*NLSQEPLQPFH
Trigger: GTGGAAAGGCTGAAGTGGCTCCTGAGAGAGGTTCCAGGCTGCACACTCCCTCCCCCTCTTGCTGCTTCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578172.1
CDS CCA 72 bp AGCAAGCTTCAAGGCCAGTGGCCTGGGACAATGGACTaGTACAGCTCGTTCAGGCTCTGGGGCTCTGCTTCC +
Preference number: 6 (lower is better)
Translates to: SKLQGQWPGTMD*YSSFRLWGSAS
Trigger: GGAAGCAGAGCCCCAGAGCCTGAACGAGCTGTACCAGTCCATTGTCCCAGGCCACTGGCCTTGAAGCTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579150.1
CDS CAA 72 bp TTGGGAATCCTGGGGAACCAGGACCACATGACCTGTTaGGCAACTGCCGCACACTGGCCACGGAAGCCACAG +
Preference number: 6 (lower is better)
Translates to: LGILGNQDHMTC*ATAAHWPRKPQ
Trigger: CTGTGGCTTCCGTGGCCAGTGTGCGGCAGTTGCCAAACAGGTCATGTGGTCCTGGTTCCCCAGGATTCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578172.1
CDS CAA 90 bp CTGTACTGCAGACAGTGCCCGGAACCCAGCAGAAAGGGAGCACCATaGGATGCCAAGAAGAATCTGGCACCTGGGCCACGGGGGTGTACA +
Preference number: 6 (lower is better)
Translates to: LYCRQCPEPSRKGAP*DAKKNLAPGPRGCT
Trigger: TGTACACCCCCGTGGCCCAGGTGCCAGATTCTTCTTGGCATCCAATGGTGCTCCCTTTCTGCTGGGTTCCGGGCACTGTCTGCAGTACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578172.1
CDS TCA 72 bp TTGAGCCTTTGGGAATCCTGGGGAACCAGGACCACATaGCCTGTTTGGCAACTGCCGCACACTGGCCACGGA +
Preference number: 6 (lower is better)
Translates to: LSLWESWGTRTT*PVWQLPHTGHG
Trigger: TCCGTGGCCAGTGTGCGGCAGTTGCCAAACAGGTCATGTGGTCCTGGTTCCCCAGGATTCCCAAAGGCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578172.1
CDS GCA 72 bp GTGGCAGGCAAGCCCCTAAACCTGTACTGCAGACAGTaGCCGGAACCCAGCAGAAAGGGAGCACCATTGGAT +
Preference number: 6 (lower is better)
Translates to: VAGKPLNLYCRQ*PEPSRKGAPLD
Trigger: ATCCAATGGTGCTCCCTTTCTGCTGGGTTCCGGGCACTGTCTGCAGTACAGGTTTAGGGGCTTGCCTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578172.1
CDS GCA 72 bp CACATCACAGTGGCAGGCAAGCCCCTAAACCTGTACTaGAGACAGTGCCCGGAACCCAGCAGAAAGGGAGCA +
Preference number: 6 (lower is better)
Translates to: HITVAGKPLNLY*RQCPEPSRKGA
Trigger: TGCTCCCTTTCTGCTGGGTTCCGGGCACTGTCTGCAGTACAGGTTTAGGGGCTTGCCTGCCACTGTGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578172.1
CDS GCA 72 bp TTGGGAGATAAAGCCAACTACGACAAGGGGCCACACTaGACCACACCTGCCCACTACTGCCCCCACCTACTC +
Preference number: 6 (lower is better)
Translates to: LGDKANYDKGPH*TTPAHYCPHLL
Trigger: GAGTAGGTGGGGGCAGTAGTGGGCAGGTGTGGTGCAGTGTGGCCCCTTGTCGTAGTTGGCTTTATCTCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578172.1
CDS TCA 72 bp GTGGAAGTTGCAGTGAGCCAAGATCATGCCACTGGGTaGCAGAGCAAGCTTCAAGGCCAGTGGCCTGGGACA +
Preference number: 6 (lower is better)
Translates to: VEVAVSQDHATG*QSKLQGQWPGT
Trigger: TGTCCCAGGCCACTGGCCTTGAAGCTTGCTCTGTCACCCAGTGGCATGATCTTGGCTCACTGCAACTTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579150.1
CDS CCA 72 bp GGGCCACGGGGGTGTACAAAAGCAGCAACTAGGAGATaGCTCCTCAAGCAGGTTGAGGATGGGATTCTGGCA +
Preference number: 6 (lower is better)
Translates to: GPRGCTKAATRR*LLKQVEDGILA
Trigger: TGCCAGAATCCCATCCTCAACCTGCTTGAGGAGCCATCTCCTAGTTGCTGCTTTTGTACACCCCCGTGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578172.1
CDS CCA 72 bp AGCGACAGGAGGCACTTTTGGTTGCAGCATAGGCGCTaGGTGACTTGGGCCCACAGAATCATCCTGCACACA +
Preference number: 6 (lower is better)
Translates to: SDRRHFWLQHRR*VTWAHRIILHT
Trigger: TGTGTGCAGGATGATTCTGTGGGCCCAAGTCACCCAGCGCCTATGCTGCAACCAAAAGTGCCTCCTGTCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000582490.5
ENST00000583066.5
ENST00000584866.1
CDS TCA 72 bp GCAACTGCCGCACACTGGCCACGGAAGCCACAGTCCTaGTTCTTTCCCCATAAAGCAGGTCTAAATGCCTGG +
Preference number: 6 (lower is better)
Translates to: ATAAHWPRKPQS*FFPHKAGLNAW
Trigger: CCAGGCATTTAGACCTGCTTTATGGGGAAAGAATCAGGACTGTGGCTTCCGTGGCCAGTGTGCGGCAGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578172.1
CDS TCA 72 bp GTGCCTGTAATCCCAGCTACTCAGGTGGGTGAAGCTTaGGAACCGCTTGAACCTGGGAGGTGGAAGTTGCAG +
Preference number: 6 (lower is better)
Translates to: VPVIPATQVGEA*EPLEPGRWKLQ
Trigger: CTGCAACTTCCACCTCCCAGGTTCAAGCGGTTCTCAAGCTTCACCCACCTGAGTAGCTGGGATTACAGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579150.1
CDS TCA 72 bp ACAGGAGGCACTTTTGGTTGCAGCATAGGCGCTGGGTaGCTTGGGCCCACAGAATCATCCTGCACACAGAGT +
Preference number: 6 (lower is better)
Translates to: TGGTFGCSIGAG*LGPTESSCTQS
Trigger: ACTCTGTGTGCAGGATGATTCTGTGGGCCCAAGTCACCCAGCGCCTATGCTGCAACCAAAAGTGCCTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000582490.5
ENST00000583066.5
ENST00000584866.1
CDS TCA 72 bp ACTGGCTGCCTGGAAAGCACCAGCTGGTTAGAGAATTaGGCCTTTGGGAATCCTGGGGAACCAGGACCACAT +
Preference number: 6 (lower is better)
Translates to: TGCLESTSWLEN*AFGNPGEPGPH
Trigger: ATGTGGTCCTGGTTCCCCAGGATTCCCAAAGGCTCAATTCTCTAACCAGCTGGTGCTTTCCAGGCAGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578172.1
CDS CCA 72 bp AAAGGTCCTTTGATACAAAGCGACAGGAGGCACTTTTaGTTGCAGCATAGGCGCTGGGTGACTTGGGCCCAC +
Preference number: 6 (lower is better)
Translates to: KGPLIQSDRRHF*LQHRRWVTWAH
Trigger: GTGGGCCCAAGTCACCCAGCGCCTATGCTGCAACCAAAAGTGCCTCCTGTCGCTTTGTATCAAAGGACCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000582490.5
ENST00000583066.5
ENST00000584866.1
CDS TCA 72 bp GCTTCACTGCATCTGAAGTTTCAGCGGGTGGGAAGGTaGACACATGTACACCCGCACACATGCACACACACA +
Preference number: 6 (lower is better)
Translates to: ASLHLKFQRVGR*THVHPHTCTHT
Trigger: TGTGTGTGTGCATGTGTGCGGGTGTACATGTGTTCACCTTCCCACCCGCTGAAACTTCAGATGCAGTGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583683.1
CDS CCA 72 bp CTGGGAAGCAGGCACGGCAGCCCATGTTTCAGGAACTaGCAGAAGTGCTCACAGACTAGACAAAAACCTGAT +
Preference number: 6 (lower is better)
Translates to: LGSRHGSPCFRN*QKCSQTRQKPD
Trigger: ATCAGGTTTTTGTCTAGTCTGTGAGCACTTCTGCCAGTTCCTGAAACATGGGCTGCCGTGCCTGCTTCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583683.1
CDS CAA 90 bp CATGACAAAGGTCCTTTGATACAAAGCGACAGGAGGCACTTTTGGTaGCAGCATAGGCGCTGGGTGACTTGGGCCCACAGAATCATCCTG +
Preference number: 6 (lower is better)
Translates to: HDKGPLIQSDRRHFW*QHRRWVTWAHRIIL
Trigger: CAGGATGATTCTGTGGGCCCAAGTCACCCAGCGCCTATGCTGCAACCAAAAGTGCCTCCTGTCGCTTTGTATCAAAGGACCTTTGTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000582490.5
ENST00000583066.5
ENST00000584866.1
CDS CAA 90 bp CCATTTGGTATAGCTTTCGGTGAAGGAAAAGTGTTCTCCGTTCCTTaGCCAACAGGGGTAGCTGGCAAAGAAAGTGATGCTTGGACGGCG +
Preference number: 6 (lower is better)
Translates to: PFGIAFGEGKVFSVP*PTGVAGKESDAWTA
Trigger: CGCCGTCCAAGCATCACTTTCTTTGCCAGCTACCCCTGTTGGCAAAGGAACGGAGAACACTTTTCCTTCACCGAAAGCTATACCAAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
ENST00000581679.1
ENST00000582277.5
CDS TCA 72 bp AATGTCCCAGTGCACAAGACAGGACTGAAGGAAGAGTaGTGGGGCAGGCTTGAAGATACAGATCTGGGAATC +
Preference number: 6 (lower is better)
Translates to: NVPVHKTGLKEE*WGRLEDTDLGI
Trigger: GATTCCCAGATCTGTATCTTCAAGCCTGCCCCATCACTCTTCCTTCAGTCCTGTCTTGTGCACTGGGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578172.1
CDS GCA 72 bp ACCGTAAGGAACAACAGGTTCATCCCACTGTTCCACTaGCAAGACAACCAAAGCAAGAGAAGGTCCAGCCAT +
Preference number: 6 (lower is better)
Translates to: TVRNNRFIPLFH*QDNQSKRRSSH
Trigger: ATGGCTGGACCTTCTCTTGCTTTGGTTGTCTTGGCAGTGGAACAGTGGGATGAACCTGTTGTTCCTTACGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578172.1
CDS GCA 72 bp AGGCACGGCAGCCCATGTTTCAGGAACTGGCAGAAGTaGTCACAGACTAGACAAAAACCTGATTCCAAGAAG +
Preference number: 6 (lower is better)
Translates to: RHGSPCFRNWQK*SQTRQKPDSKK
Trigger: CTTCTTGGAATCAGGTTTTTGTCTAGTCTGTGAGCACTTCTGCCAGTTCCTGAAACATGGGCTGCCGTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583683.1
CDS CCA 72 bp TTGCCAACAGGGGTAGCTGGCAAAGAAAGTGATGCTTaGACGGCGGAGTCCATCTTTTCACAGTCTAGAGTT +
Preference number: 6 (lower is better)
Translates to: LPTGVAGKESDA*TAESIFSQSRV
Trigger: AACTCTAGACTGTGAAAAGATGGACTCCGCCGTCCAAGCATCACTTTCTTTGCCAGCTACCCCTGTTGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
ENST00000581679.1
ENST00000582277.5
CDS CCA 72 bp CCCACAGAATCATCCTGCACACAGAGTTGCAGCAGTTaGTTTAAGGCCACGTGGTCTTCTCCAATGTGTCAA +
Preference number: 6 (lower is better)
Translates to: PTESSCTQSCSS*FKATWSSPMCQ
Trigger: TTGACACATTGGAGAAGACCACGTGGCCTTAAACCAACTGCTGCAACTCTGTGTGCAGGATGATTCTGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582490.5
ENST00000584866.1
CDS CAA 72 bp CAAAAGCAGCAACTAGGAGATGGCTCCTCAAGCAGGTaGAGGATGGGATTCTGGCATTTTCAAGTGCACCGT +
Preference number: 6 (lower is better)
Translates to: QKQQLGDGSSSR*RMGFWHFQVHR
Trigger: ACGGTGCACTTGAAAATGCCAGAATCCCATCCTCAACCTGCTTGAGGAGCCATCTCCTAGTTGCTGCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578172.1
CDS TCA 72 bp ACCTGCTCTGCCTTTGTCGAAGAAAGATGTATGCCCTaGTCGAGAGAACTTTGTGCCATTGCCATTCAGCAC +
Preference number: 6 (lower is better)
Translates to: TCSAFVEERCMP*SRELCAIAIQH
Trigger: GTGCTGAATGGCAATGGCACAAAGTTCTCTCGATCAGGGCATACATCTTTCTTCGACAAAGGCAGAGCAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582277.5
CDS CCA 72 bp ACTCCAATGCAGGCCGGCTCTAATGGGAAAAGTAAGTaGTGCAGCCCAGACTATAAAGAGAGAACCGGTAAA +
Preference number: 6 (lower is better)
Translates to: TPMQAGSNGKSK*CSPDYKERTGK
Trigger: TTTACCGGTTCTCTCTTTATAGTCTGGGCTGCACCACTTACTTTTCCCATTAGAGCCGGCCTGCATTGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578172.1
CDS CAA 72 bp CAGGAGAAAGGCTCTGACAAATGTCATTTCTCCCTGTaGCACACTGTCCTACTTCGACGACAAACAGCCAGA +
Preference number: 6 (lower is better)
Translates to: QEKGSDKCHFSL*HTVLLRRQTAR
Trigger: TCTGGCTGTTTGTCGTCGAAGTAGGACAGTGTGCAACAGGGAGAAATGACATTTGTCAGAGCCTTTCTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578172.1
CDS CAA 90 bp TTCCACCTTGAAACGCTTCCTAGGAAAATTTGTCCCACTAGCAATTaGGGAGATAAAGCCAACTACGACAAGGGGCCACACTGCACCACA +
Preference number: 6 (lower is better)
Translates to: FHLETLPRKICPTSN*GDKANYDKGPHCTT
Trigger: TGTGGTGCAGTGTGGCCCCTTGTCGTAGTTGGCTTTATCTCCCAAATTGCTAGTGGGACAAATTTTCCTAGGAAGCGTTTCAAGGTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578172.1
CDS TCA 72 bp GTTTACTGCCCCTTTGTCGAAGAAAGATGTATGCCCTaGTCGAGAGAACTTTGTGCCATTGCCATTCAGCAC +
Preference number: 6 (lower is better)
Translates to: VYCPFVEERCMP*SRELCAIAIQH
Trigger: GTGCTGAATGGCAATGGCACAAAGTTCTCTCGATCAGGGCATACATCTTTCTTCGACAAAGGGGCAGTAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334527.12
CDS GCA 72 bp AAGCCGTTTACTGCCCCTTTGTCGAAGAAAGATGTATaGCCTGATCGAGAGAACTTTGTGCCATTGCCATTC +
Preference number: 6 (lower is better)
Translates to: KPFTAPLSKKDV*PDRENFVPLPF
Trigger: GAATGGCAATGGCACAAAGTTCTCTCGATCAGGGCATACATCTTTCTTCGACAAAGGGGCAGTAAACGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334527.12
CDS GCA 72 bp CCAATGCAGGCCGGCTCTAATGGGAAAAGTAAGTGGTaGAGCCCAGACTATAAAGAGAGAACCGGTAAATTT +
Preference number: 6 (lower is better)
Translates to: PMQAGSNGKSKW*SPDYKERTGKF
Trigger: AAATTTACCGGTTCTCTCTTTATAGTCTGGGCTGCACCACTTACTTTTCCCATTAGAGCCGGCCTGCATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578172.1
CDS GCA 72 bp GTTGTACCTGCTCTGCCTTTGTCGAAGAAAGATGTATaGCCTGATCGAGAGAACTTTGTGCCATTGCCATTC +
Preference number: 6 (lower is better)
Translates to: VVPALPLSKKDV*PDRENFVPLPF
Trigger: GAATGGCAATGGCACAAAGTTCTCTCGATCAGGGCATACATCTTTCTTCGACAAAGGCAGAGCAGGTACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582277.5
CDS GCA 72 bp AAACACTCCACTGCAAGGATAAGAGCCTATTCAGAGTaGACCGTGTGTCGAATCTGCTCCTTTACACATGTG +
Preference number: 6 (lower is better)
Translates to: KHSTARIRAYSE*TVCRICSFTHV
Trigger: CACATGTGTAAAGGAGCAGATTCGACACACGGTGCACTCTGAATAGGCTCTTATCCTTGCAGTGGAGTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582277.5
CDS CAA 72 bp ATAGCTTTCGGTGAAGGAAAAGTGTTCTCCGTTCCTTaGCCAACAGGGGTAGCTGGCAAAGAAAGTGATGCT +
Preference number: 6 (lower is better)
Translates to: IAFGEGKVFSVP*PTGVAGKESDA
Trigger: AGCATCACTTTCTTTGCCAGCTACCCCTGTTGGCAAAGGAACGGAGAACACTTTTCCTTCACCGAAAGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334527.12
ENST00000380025.8
ENST00000402554.7
ENST00000581679.1
ENST00000582277.5
CDS CAA 72 bp GAAACGCTTCCTAGGAAAATTTGTCCCACTAGCAATTaGGGAGATAAAGCCAACTACGACAAGGGGCCACAC +
Preference number: 6 (lower is better)
Translates to: ETLPRKICPTSN*GDKANYDKGPH
Trigger: GTGTGGCCCCTTGTCGTAGTTGGCTTTATCTCCCAAATTGCTAGTGGGACAAATTTTCCTAGGAAGCGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578172.1
CDS TCA 72 bp AGGATAACCTCACAGACAAACAGGCATGCAGAGACTTaGCAAATAGTCCCTGCCTACTTGGAAGAAACAAAG +
Preference number: 6 (lower is better)
Translates to: RITSQTNRHAET*QIVPAYLEETK
Trigger: CTTTGTTTCTTCCAAGTAGGCAGGGACTATTTGTCAAGTCTCTGCATGCCTGTTTGTCTGTGAGGTTATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578172.1
CDS TCA 72 bp GTCGAATCTGCTCCTTTACACATGTGCCATAATTATTaGGGACGGCAGAAAATCCCAGCTGCTTTCAGAGAT +
Preference number: 6 (lower is better)
Translates to: VESAPLHMCHNY*GRQKIPAAFRD
Trigger: ATCTCTGAAAGCAGCTGGGATTTTCTGCCGTCCTCAATAATTATGGCACATGTGTAAAGGAGCAGATTCGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582277.5
CDS GCA 72 bp CGTGTTAGAACACATCCTTTGTCGAAGAAAGATGTATaGCCTGATCGAGAGAACTTTGTGCCATTGCCATTC +
Preference number: 6 (lower is better)
Translates to: RVRTHPLSKKDV*PDRENFVPLPF
Trigger: GAATGGCAATGGCACAAAGTTCTCTCGATCAGGGCATACATCTTTCTTCGACAAAGGATGTGTTCTAACACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581679.1
CDS GCA 72 bp AATACTATTTCCACATCACGCCCTAAAATTAGTCCATaGCCACCTACACACAGCCCAAAAGAACTCAGAGTG +
Preference number: 6 (lower is better)
Translates to: NTISTSRPKISP*PPTHSPKELRV
Trigger: CACTCTGAGTTCTTTTGGGCTGTGTGTAGGTGGGCATGGACTAATTTTAGGGCGTGATGTGGAAATAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583683.1
CDS CAA 72 bp GAGGATAACCTCACAGACAAACAGGCATGCAGAGACTaGACAAATAGTCCCTGCCTACTTGGAAGAAACAAA +
Preference number: 6 (lower is better)
Translates to: EDNLTDKQACRD*TNSPCLLGRNK
Trigger: TTTGTTTCTTCCAAGTAGGCAGGGACTATTTGTCAAGTCTCTGCATGCCTGTTTGTCTGTGAGGTTATCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578172.1