Pregenerated sensors for NDC80 (Homo sapiens)
Ensembl gene IDs: ENSG00000080986Ensembl transcript IDs: ENST00000261597.9, ENST00000574096.1, ENST00000574567.1, ENST00000575515.1
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TCAGCTCTGGAGGCCGGAAGTTTGAAATCAAGACGTCAGCAGGGCCATGGTCTCTCTCTCCCCAGTTGCTaGCGGCTCCTGGCAGTCCTT | + |
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Preference number: 2 (lower is better) Translates to: SALEAGSLKSRRQQGHGLSLPSC*RLLAVL Trigger: AAGGACTGCCAGGAGCCGCCAGCAACTGGGGAGAGA...GAGACCATGGCCCTGCTGACGTCTTGATTTCAAACTTCCGGCCTCCAGAGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574096.1 |
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| 3UTR-3UTR CCA 90 bp | TTTGCGATTTCAAATACTGATACTGTAACAAATTGCCACAAACTAGGTGGCTTAGCTCCTGGCAGTCCTTaGTGTTCCTTAGCATGCGGC | + |
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Preference number: 2 (lower is better) Translates to: FAISNTDTVTNCHKLGGLAPGSP*CSLACG Trigger: GCCGCATGCTAAGGAACACCAAGGACTGCCAGGAGC...TAAGCCACCTAGTTTGTGGCAATTTGTTACAGTATCAGTATTTGAAATCGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574096.1 |
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| 3UTR TCA 72 bp | AGAAATGTACTCTTTCAGCTCTGGAGGCCGGAAGTTTaGAATCAAGACGTCAGCAGGGCCATGGTCTCTCTG | + |
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Preference number: 3 (lower is better) Translates to: RNVLFQLWRPEV*NQDVSRAMVSL Trigger: CAGAGAGACCATGGCCCTGCTGACGTCTTGATTTCAAACTTCCGGCCTCCAGAGCTGAAAGAGTACATTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574096.1 |
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| 3UTR-3UTR CAA 90 bp | TTTGCGATTTCAAATACTGATACTGTAACAAATTGCCACAAACTAGGTGGCTTAGGCTCCTGGCAGTCCTaGGTGTTCCTTAGCATGCGG | + |
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Preference number: 3 (lower is better) Translates to: FAISNTDTVTNCHKLGGLGSWQS*VFLSMR Trigger: CCGCATGCTAAGGAACACCAAGGACTGCCAGGAGCC...TAAGCCACCTAGTTTGTGGCAATTTGTTACAGTATCAGTATTTGAAATCGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574096.1 |
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| CDS-3UTR GCA 90 bp | CCCCAGTTGCTGGCGGCTCCTGGCAGTCCTTGGTGTTCCTTAGCATGCGGCTGCTCGTCTCTCCCCAGTTaGTGGCGGCTCCTGGCAGTC | + |
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Preference number: 4 (lower is better) Translates to: PQLLAAPGSPWCSLACGCSSLPS*WRLLAV Trigger: GACTGCCAGGAGCCGCCAGCAACTGGGGAGAGACGA...GCAGCCGCATGCTAAGGAACACCAAGGACTGCCAGGAGCCGCCAGCAACTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000574096.1 |
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| CDS-3UTR GCA 90 bp | CCCCAGTTGCTGGCGGCTCCTGGCAGTCCTTGGTGTTCCTTAGCATGCGGCTGCTGGTGTTCCTTAGCATaGGGCTGCTTCACCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: PQLLAAPGSPWCSLACGCWCSLA*GCFTPA Trigger: TGCTGGGGTGAAGCAGCCGCATGCTAAGGAACACCA...GCAGCCGCATGCTAAGGAACACCAAGGACTGCCAGGAGCCGCCAGCAACTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000574096.1 |
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| CDS-3UTR CCA 90 bp | GCTCTGGAGGCCGGAAGTTTGAAATCAAGACGTCAGCAGGGCCATGGTCTCTCTGCTCCTGGCAGTCCTTaGTGTTCCTTAGCATGCGGC | + |
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Preference number: 4 (lower is better) Translates to: ALEAGSLKSRRQQGHGLSAPGSP*CSLACG Trigger: GCCGCATGCTAAGGAACACCAAGGACTGCCAGGAGC...AGAGAGACCATGGCCCTGCTGACGTCTTGATTTCAAACTTCCGGCCTCCAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574096.1 |
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| CDS-3UTR CCA 90 bp | TCAGCTCTGGAGGCCGGAAGTTTGAAATCAAGACGTCAGCAGGGCCATGGTCTCGTTGCTGGCGGCTCCTaGCAGTCCTTGGTGTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: SALEAGSLKSRRQQGHGLVAGGS*QSLVFL Trigger: AAGGAACACCAAGGACTGCCAGGAGCCGCCAGCAAC...GAGACCATGGCCCTGCTGACGTCTTGATTTCAAACTTCCGGCCTCCAGAGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574096.1 |
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| 3UTR CAA 72 bp | GGCTCTAGGGAAGAATCCTTCTTCGTCTCTCCCCAGTaGCTGGCGGCTCCTGGCAGTCCTTGGTGTTCCTTA | + |
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Preference number: 4 (lower is better) Translates to: GSREESFFVSPQ*LAAPGSPWCSL Trigger: TAAGGAACACCAAGGACTGCCAGGAGCCGCCAGCAACTGGGGAGAGACGAAGAAGGATTCTTCCCTAGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574096.1 |
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| 3UTR CAA 72 bp | CAGAAATGTACTCTTTCAGCTCTGGAGGCCGGAAGTTaGAAATCAAGACGTCAGCAGGGCCATGGTCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: QKCTLSALEAGS*KSRRQQGHGLS Trigger: AGAGAGACCATGGCCCTGCTGACGTCTTGATTTCAAACTTCCGGCCTCCAGAGCTGAAAGAGTACATTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574096.1 |
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| CDS-3UTR GCA 90 bp | TTTGCGATTTCAAATACTGATACTGTAACAAATTGCCACAAACTAGGTGGCTTAGATACTGTAACAAATTaGCACAAACTAGGTGGCTTA | + |
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Preference number: 4 (lower is better) Translates to: FAISNTDTVTNCHKLGGLDTVTN*HKLGGL Trigger: TAAGCCACCTAGTTTGTGGCAATTTGTTACAGTATC...TAAGCCACCTAGTTTGTGGCAATTTGTTACAGTATCAGTATTTGAAATCGCAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574096.1 |
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| CDS-3UTR CAA 90 bp | CCCCAGTTGCTGGCGGCTCCTGGCAGTCCTTGGTGTTCCTTAGCATGCGGCTGCCTGGAGGCCGGAAGTTaGAAATCAAGACGTCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: PQLLAAPGSPWCSLACGCLEAGS*KSRRQQ Trigger: CTGCTGACGTCTTGATTTCAAACTTCCGGCCTCCAG...GCAGCCGCATGCTAAGGAACACCAAGGACTGCCAGGAGCCGCCAGCAACTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574096.1 |
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| CDS-3UTR CAA 90 bp | GCTCTGGAGGCCGGAAGTTTGAAATCAAGACGTCAGCAGGGCCATGGTCTCTCTGGCTCCTGGCAGTCCTaGGTGTTCCTTAGCATGCGG | + |
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Preference number: 5 (lower is better) Translates to: ALEAGSLKSRRQQGHGLSGSWQS*VFLSMR Trigger: CCGCATGCTAAGGAACACCAAGGACTGCCAGGAGCC...AGAGAGACCATGGCCCTGCTGACGTCTTGATTTCAAACTTCCGGCCTCCAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574096.1 |
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| CDS CCA 90 bp | TATAGAGGCCTTGTTTATTTACATCCTGGGATCTTAACTCCTGCATaGAGAGGCGGCCAGCACCACCGCTGGAAACTGAACTGCGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: YRGLVYLHPGILTPA*RGGQHHRWKLNCAS Trigger: TGAAGCGCAGTTCAGTTTCCAGCGGTGGTGCTGGCCGCCTCTCCATGCAGGAGTTAAGATCCCAGGATGTAAATAAACAAGGCCTCTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261597.9 ENST00000575515.1 |
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| CDS GCA 90 bp | TTCCAGTTTCCTGACACGACCCAGGGACCGAATTTCTGTAAACCGTaGAAGTATCTGCTAGACAGGACAGCGGTCATCAAAACACCAGGT | + |
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Preference number: 5 (lower is better) Translates to: FQFPDTTQGPNFCKP*KYLLDRTAVIKTPG Trigger: ACCTGGTGTTTTGATGACCGCTGTCCTGTCTAGCAGATACTTGCACGGTTTACAGAAATTCGGTCCCTGGGTCGTGTCAGGAAACTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261597.9 ENST00000575515.1 |
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| CDS GCA 90 bp | TTCTCTACAGACCCAACATGTGTAGCAACCATCTCTAACAGACGTTaGAAGTTATTTCCCACTTTTCGTCTTTCTTCAGTCGTGGTTTGC | + |
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Preference number: 5 (lower is better) Translates to: FSTDPTCVATISNRR*KLFPTFRLSSVVVC Trigger: GCAAACCACGACTGAAGAAAGACGAAAAGTGGGAAATAACTTGCAACGTCTGTTAGAGATGGTTGCTACACATGTTGGGTCTGTAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261597.9 |
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| CDS CCA 90 bp | ACAGACGTTGCAAGTTATTTCCCACTTTTCGTCTTTCTTCAGTCGTaGTTTGCACAACTAGTTGGTATTCCCGCTGAACAGCATCTAATT | + |
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Preference number: 5 (lower is better) Translates to: TDVASYFPLFVFLQS*FAQLVGIPAEQHLI Trigger: AATTAGATGCTGTTCAGCGGGAATACCAACTAGTTGTGCAAACCACGACTGAAGAAAGACGAAAAGTGGGAAATAACTTGCAACGTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261597.9 |
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| CDS TCA 90 bp | AACCCTTTCCCATGTATACATTTCAAAAGAACAAATCAAATACCTTaGTGCAGTCTATTAGCCAAACTAAGGCTGCCACAATGTGAGGCC | + |
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Preference number: 5 (lower is better) Translates to: NPFPCIHFKRTNQIP*CSLLAKLRLPQCEA Trigger: GGCCTCACATTGTGGCAGCCTTAGTTTGGCTAATAGACTGCATCAAGGTATTTGATTTGTTCTTTTGAAATGTATACATGGGAAAGGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574567.1 |
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| CDS GCA 90 bp | TTCTGTAAGAAACTCACAGAGTTGTCGAATACACTGCTGAATGAATaGTTTGTCATTAAGTGGTCTCGGGTCCTTGATTTTCTCAGAACT | + |
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Preference number: 5 (lower is better) Translates to: FCKKLTELSNTLLNE*FVIKWSRVLDFLRT Trigger: AGTTCTGAGAAAATCAAGGACCCGAGACCACTTAATGACAAAGCATTCATTCAGCAGTGTATTCGACAACTCTGTGAGTTTCTTACAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261597.9 |
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| CDS GCA 90 bp | AACTTATTATGCATAATTCCATCTTCAGTTTCTTCTCCCCAAGGCTaGCCATCATCAAATAAAGGTGAGCTTTCTTTCATGGCAGTATGT | + |
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Preference number: 5 (lower is better) Translates to: NLLCIIPSSVSSPQG*PSSNKGELSFMAVC Trigger: ACATACTGCCATGAAAGAAAGCTCACCTTTATTTGATGATGGGCAGCCTTGGGGAGAAGAAACTGAAGATGGAATTATGCATAATAAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261597.9 |
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| CDS GCA 90 bp | GACCATTTAATTTCTGGTCAAGAATGGCTGAATGAGACTCCAAATTaGTCATGTATGCCTGATACTTTTGAACATCTCCTTGTAAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: DHLISGQEWLNETPN*SCMPDTFEHLLVRK Trigger: CTTCCTTACAAGGAGATGTTCAAAAGTATCAGGCATACATGAGCAATTTGGAGTCTCATTCAGCCATTCTTGACCAGAAATTAAATGGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261597.9 |
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| CDS TCA 90 bp | GATTTATTCGCTCAATGTCTGCAACTGAGTACTTCTGGTTGTCAATaGTATTCTGTAGTCGAGTGTTCTCCTGTTTTATTGTTTCACATT | + |
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Preference number: 5 (lower is better) Translates to: DLFAQCLQLSTSGCQ*YSVVECSPVLLFHI Trigger: AATGTGAAACAATAAAACAGGAGAACACTCGACTACAGAATATCATTGACAACCAGAAGTACTCAGTTGCAGACATTGAGCGAATAAATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261597.9 |
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| CDS CAA 72 bp | CGTCTCTCCCCAGTTGCTGGCGGCTCCTGGCAGTCCTaGGTGTTCCTTAGCATGCGGCTGCTTCACCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: RLSPVAGGSWQS*VFLSMRLLHPS Trigger: GCTGGGGTGAAGCAGCCGCATGCTAAGGAACACCAAGGACTGCCAGGAGCCGCCAGCAACTGGGGAGAGACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000574096.1 |
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| CDS CCA 72 bp | GTCTCTCCCCAGTTGCTGGCGGCTCCTGGCAGTCCTTaGTGTTCCTTAGCATGCGGCTGCTTCACCCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: VSPQLLAAPGSP*CSLACGCFTPA Trigger: TGCTGGGGTGAAGCAGCCGCATGCTAAGGAACACCAAGGACTGCCAGGAGCCGCCAGCAACTGGGGAGAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000574096.1 |
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| CDS GCA 72 bp | GCTCCTGGCAGTCCTTGGTGTTCCTTAGCATGCGGCTaGTTCACCCCAGCATCCGCCTCTCTACAGACCCAA | + |
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Preference number: 6 (lower is better) Translates to: APGSPWCSLACG*FTPASASLQTQ Trigger: TTGGGTCTGTAGAGAGGCGGATGCTGGGGTGAAGCAGCCGCATGCTAAGGAACACCAAGGACTGCCAGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574096.1 |
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| CDS GCA 72 bp | CCTGACACGACCCAGGGACCGAATTTCTGTAAACCGTaGAAGTATCTGCTAGACAGGACAGCGGTCATCAAA | + |
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Preference number: 6 (lower is better) Translates to: PDTTQGPNFCKP*KYLLDRTAVIK Trigger: TTTGATGACCGCTGTCCTGTCTAGCAGATACTTGCACGGTTTACAGAAATTCGGTCCCTGGGTCGTGTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261597.9 ENST00000575515.1 |
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| CDS CCA 72 bp | CTTGTTTATTTACATCCTGGGATCTTAACTCCTGCATaGAGAGGCGGCCAGCACCACCGCTGGAAACTGAAC | + |
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Preference number: 6 (lower is better) Translates to: LVYLHPGILTPA*RGGQHHRWKLN Trigger: GTTCAGTTTCCAGCGGTGGTGCTGGCCGCCTCTCCATGCAGGAGTTAAGATCCCAGGATGTAAATAAACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261597.9 ENST00000575515.1 |
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| CDS CAA 90 bp | ATAGCTTCACTGAGCCCCTGGTTAACAGTACTTTCTAGCAGGTGCTaGTGTTTCTCCAAGGACTCAAGCTCACTGGCACATTTTTCATCC | + |
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Preference number: 6 (lower is better) Translates to: IASLSPWLTVLSSRC*CFSKDSSSLAHFSS Trigger: GGATGAAAAATGTGCCAGTGAGCTTGAGTCCTTGGAGAAACACAAGCACCTGCTAGAAAGTACTGTTAACCAGGGGCTCAGTGAAGCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000261597.9 |
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| CDS CAA 90 bp | TGGTCTCGGGTCCTTGATTTTCTCAGAACTGGAAAATATACCAAGTaGACTATTCCGGGATCCATGTCCACTAGTTCTGTAATCCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: WSRVLDFLRTGKYTK*TIPGSMSTSSVIPA Trigger: AGCTGGGATTACAGAACTAGTGGACATGGATCCCGGAATAGTCAACTTGGTATATTTTCCAGTTCTGAGAAAATCAAGGACCCGAGACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000575515.1 |
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| CDS CCA 72 bp | GCAAGTTATTTCCCACTTTTCGTCTTTCTTCAGTCGTaGTTTGCACAACTAGTTGGTATTCCCGCTGAACAG | + |
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Preference number: 6 (lower is better) Translates to: ASYFPLFVFLQS*FAQLVGIPAEQ Trigger: CTGTTCAGCGGGAATACCAACTAGTTGTGCAAACCACGACTGAAGAAAGACGAAAAGTGGGAAATAACTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261597.9 |
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| CDS TCA 72 bp | TCTGTAAGAAACTCACAGAGTTGTCGAATACACTGCTaGATGAATGCTTTGTCATTAAGTGGTCTCGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: SVRNSQSCRIHC*MNALSLSGLGS Trigger: GGACCCGAGACCACTTAATGACAAAGCATTCATTCAGCAGTGTATTCGACAACTCTGTGAGTTTCTTACAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261597.9 |
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| CDS CCA 72 bp | ACAGCATCTAATTCATTCATAGCTTCACTGAGCCCCTaGTTAACAGTACTTTCTAGCAGGTGCTTGTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: TASNSFIASLSP*LTVLSSRCLCF Trigger: GAAACACAAGCACCTGCTAGAAAGTACTGTTAACCAGGGGCTCAGTGAAGCTATGAATGAATTAGATGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261597.9 |
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| CDS GCA 72 bp | TGCATAATTCCATCTTCAGTTTCTTCTCCCCAAGGCTaGCCATCATCAAATAAAGGTGAGCTTTCTTTCATG | + |
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Preference number: 6 (lower is better) Translates to: CIIPSSVSSPQG*PSSNKGELSFM Trigger: CATGAAAGAAAGCTCACCTTTATTTGATGATGGGCAGCCTTGGGGAGAAGAAACTGAAGATGGAATTATGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261597.9 |
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| CDS TCA 72 bp | GCTCAATGTCTGCAACTGAGTACTTCTGGTTGTCAATaGTATTCTGTAGTCGAGTGTTCTCCTGTTTTATTG | + |
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Preference number: 6 (lower is better) Translates to: AQCLQLSTSGCQ*YSVVECSPVLL Trigger: CAATAAAACAGGAGAACACTCGACTACAGAATATCATTGACAACCAGAAGTACTCAGTTGCAGACATTGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261597.9 |
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| CDS CAA 72 bp | TTTATTCGCTCAATGTCTGCAACTGAGTACTTCTGGTaGTCAATGATATTCTGTAGTCGAGTGTTCTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: FIRSMSATEYFW*SMIFCSRVFSC Trigger: ACAGGAGAACACTCGACTACAGAATATCATTGACAACCAGAAGTACTCAGTTGCAGACATTGAGCGAATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261597.9 |
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| CDS CAA 72 bp | GTCCTTGATTTTCTCAGAACTGGAAAATATACCAAGTaGACTATTCCGGGATCCATGTCCACTAGTTCTGTA | + |
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Preference number: 6 (lower is better) Translates to: VLDFLRTGKYTK*TIPGSMSTSSV Trigger: TACAGAACTAGTGGACATGGATCCCGGAATAGTCAACTTGGTATATTTTCCAGTTCTGAGAAAATCAAGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000575515.1 |
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| CDS GCA 72 bp | ATTTCTGGTCAAGAATGGCTGAATGAGACTCCAAATTaGTCATGTATGCCTGATACTTTTGAACATCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: ISGQEWLNETPN*SCMPDTFEHLL Trigger: AAGGAGATGTTCAAAAGTATCAGGCATACATGAGCAATTTGGAGTCTCATTCAGCCATTCTTGACCAGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261597.9 |
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| CDS CAA 72 bp | GTCCTTGATTTTCTCAGAACTGGAAAATATACCAAGTaGACTATTCCGGGATCCATGTCCACTAGTTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: VLDFLRTGKYTK*TIPGSMSTSSF Trigger: AAAAGAACTAGTGGACATGGATCCCGGAATAGTCAACTTGGTATATTTTCCAGTTCTGAGAAAATCAAGGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261597.9 |
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| CDS CAA 72 bp | TTGCCAAATAGCGAGACTTTTCTTTCAGATGTCGGTTaGTTTATACTCAACTTTCCAAAGGTTGGTTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: LPNSETFLSDVG*FILNFPKVGFS Trigger: AGAGAAACCAACCTTTGGAAAGTTGAGTATAAACAAACCGACATCTGAAAGAAAAGTCTCGCTATTTGGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261597.9 ENST00000575515.1 |
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