RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NCSTN (Homo sapiens)

Ensembl gene IDs: ENSG00000162736

Ensembl transcript IDs: ENST00000294785.10, ENST00000368063.6, ENST00000424645.6, ENST00000424754.5, ENST00000435149.1, ENST00000438008.5, ENST00000459963.5, ENST00000465223.1, ENST00000467837.5, ENST00000469159.1, ENST00000491332.1, ENST00000491390.1

Found 369 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCAGCCAGCTGGGTGACAAAGGAAGCCACTGCGCTTTCAGCCCCTaGGGCCACATTCCAGAAAAAGGAACGACTATCCAGCCGGGTGGC +
Preference number: 1 (lower is better)
Translates to: SSQLGDKGSHCAFSP*GHIPEKGTTIQPGG
Trigger: GCCACCCGGCTGGATAGTCGTTCCTTTTTCTGGAATGTGGCCCCAGGGGCTGAAAGCGCAGTGGCTTCCTTTGTCACCCAGCTGGCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
3UTR GCA 90 bp CGTTTGGGGATCAGCCTGAACTGTGTCGCTGAAGTTGGTTCCTCCTaGAAGCTCATACAGAGCACGTCCCAGCACCGTGGCCACATCTGC +
Preference number: 1 (lower is better)
Translates to: RLGISLNCVAEVGSS*KLIQSTSQHRGHIC
Trigger: GCAGATGTGGCCACGGTGCTGGGACGTGCTCTGTATGAGCTTGCAGGAGGAACCAACTTCAGCGACACAGTTCAGGCTGATCCCCAAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
3UTR CCA 90 bp GACAGGGGGTCACAGACGATTTCTGGGTTGATGCTGAAGGTGCTTTaGATGGAGCTGCGCCGCATGCAGGTGGCAGTGCTGATGACAGCA +
Preference number: 1 (lower is better)
Translates to: DRGSQTISGLMLKVL*MELRRMQVAVLMTA
Trigger: TGCTGTCATCAGCACTGCCACCTGCATGCGGCGCAGCTCCATCCAAAGCACCTTCAGCATCAACCCAGAAATCGTCTGTGACCCCCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR CCA 90 bp AAGAAATCGCTGCAGGGAAGATGGTGGGAGAGGCTGGGACTGATTTaGCCTCCTGAGGATGACAGCAGGGACACCAGCACCACTCTTCTC +
Preference number: 1 (lower is better)
Translates to: KKSLQGRWWERLGLI*PPEDDSRDTSTTLL
Trigger: GAGAAGAGTGGTGCTGGTGTCCCTGCTGTCATCCTCAGGAGGCCAAATCAGTCCCAGCCTCTCCCACCATCTTCCCTGCAGCGATTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
3UTR GCA 90 bp GCAGTAGAACGCACACACCGGGGGAGTCGGTCCGTCTCATTAGAATaGAAAGGGCCCTGGACCCATGAGTACTCATACAGATCCTTGTTT +
Preference number: 1 (lower is better)
Translates to: AVERTHRGSRSVSLE*KGPWTHEYSYRSLF
Trigger: AAACAAGGATCTGTATGAGTACTCATGGGTCCAGGGCCCTTTGCATTCTAATGAGACGGACCGACTCCCCCGGTGTGTGCGTTCTACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR TCA 90 bp AACACCAAACCCATCATTTGGGCACTGTACACTAGGAGAGAAGCCTaGGGCAGGACTGGGCTTGGTCAAGGACACTGCAAGACCAGCAAT +
Preference number: 1 (lower is better)
Translates to: NTKPIIWALYTRREA*GRTGLGQGHCKTSN
Trigger: ATTGCTGGTCTTGCAGTGTCCTTGACCAAGCCCAGTCCTGCCTCAGGCTTCTCTCCTAGTGTACAGTGCCCAAATGATGGGTTTGGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000467837.5
3UTR CCA 90 bp ACACACCGGGGGAGTCGGTCCGTCTCATTAGAATGCAAAGGGCCCTaGACCCATGAGTACTCATACAGATCCTTGTTTTCACTTGGGACT +
Preference number: 1 (lower is better)
Translates to: THRGSRSVSLECKGP*THEYSYRSLFSLGT
Trigger: AGTCCCAAGTGAAAACAAGGATCTGTATGAGTACTCATGGGTCCAGGGCCCTTTGCATTCTAATGAGACGGACCGACTCCCCCGGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR TCA 90 bp GAGAACTACCCAGTCCAGGGAACCAATGGAATGTCACTGAGTTCCTaGTTCTTCCCAGCAGCAACAACAGCTGTGGTGTTCATCCTTTGG +
Preference number: 1 (lower is better)
Translates to: ENYPVQGTNGMSLSS*FFPAATTAVVFILW
Trigger: CCAAAGGATGAACACCACAGCTGTTGTTGCTGCTGGGAAGAATCAGGAACTCAGTGACATTCCATTGGTTCCCTGGACTGGGTAGTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459963.5
3UTR CCA 90 bp AATTTGCCAAGGCATACTGTACAACATAAGTGGTGTTGGTGGGGCTaGAGACAGCGATGTAATGTTGAAGAGGCCCGTCACCCAAGTAGG +
Preference number: 1 (lower is better)
Translates to: NLPRHTVQHKWCWWG*RQRCNVEEARHPSR
Trigger: CCTACTTGGGTGACGGGCCTCTTCAACATTACATCGCTGTCTCCAGCCCCACCAACACCACTTATGTTGTACAGTATGCCTTGGCAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR CCA 90 bp CAGTCAAATTTGCCAAGGCATACTGTACAACATAAGTGGTGTTGGTaGGGCTGGAGACAGCGATGTAATGTTGAAGAGGCCCGTCACCCA +
Preference number: 1 (lower is better)
Translates to: QSNLPRHTVQHKWCW*GWRQRCNVEEARHP
Trigger: TGGGTGACGGGCCTCTTCAACATTACATCGCTGTCTCCAGCCCCACCAACACCACTTATGTTGTACAGTATGCCTTGGCAAATTTGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR CCA 90 bp TGCCAGTCAAATTTGCCAAGGCATACTGTACAACATAAGTGGTGTTaGTGGGGCTGGAGACAGCGATGTAATGTTGAAGAGGCCCGTCAC +
Preference number: 1 (lower is better)
Translates to: CQSNLPRHTVQHKWC*WGWRQRCNVEEARH
Trigger: GTGACGGGCCTCTTCAACATTACATCGCTGTCTCCAGCCCCACCAACACCACTTATGTTGTACAGTATGCCTTGGCAAATTTGACTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR CCA 90 bp CCACTGTGCCAGTCAAATTTGCCAAGGCATACTGTACAACATAAGTaGTGTTGGTGGGGCTGGAGACAGCGATGTAATGTTGAAGAGGCC +
Preference number: 1 (lower is better)
Translates to: PLCQSNLPRHTVQHK*CWWGWRQRCNVEEA
Trigger: GGCCTCTTCAACATTACATCGCTGTCTCCAGCCCCACCAACACCACTTATGTTGTACAGTATGCCTTGGCAAATTTGACTGGCACAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR TCA 90 bp CTCCACCTATCCTTAATGGGCAGTGGTAGTCTGCTAGGCAACAAATaGTCAGAGAACTACCCAGTCCAGGGAACCAATGGAATGTCACTG +
Preference number: 1 (lower is better)
Translates to: LHLSLMGSGSLLGNK*SENYPVQGTNGMSL
Trigger: CAGTGACATTCCATTGGTTCCCTGGACTGGGTAGTTCTCTGATCATTTGTTGCCTAGCAGACTACCACTGCCCATTAAGGATAGGTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459963.5
3UTR GCA 90 bp CCAGCTCCACAAATGAGTCAACATTCTCTAACTGCACGGGAAACTTaGCCTTCTCCATATCGTAGACCATCCTCGAGCTGCCAATGTAGT +
Preference number: 1 (lower is better)
Translates to: PAPQMSQHSLTARET*PSPYRRPSSSCQCS
Trigger: ACTACATTGGCAGCTCGAGGATGGTCTACGATATGGAGAAGGGCAAGTTTCCCGTGCAGTTAGAGAATGTTGACTCATTTGTGGAGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
3UTR GCA 90 bp TACAGATCCTTGTTTTCACTTGGGACTTTACTTGGATCCTGGCACTaGTCTCGGGTGAGGTTGACCACTGTGCCAGTCAAATTTGCCAAG +
Preference number: 1 (lower is better)
Translates to: YRSLFSLGTLLGSWH*SRVRLTTVPVKFAK
Trigger: CTTGGCAAATTTGACTGGCACAGTGGTCAACCTCACCCGAGAGCAGTGCCAGGATCCAAGTAAAGTCCCAAGTGAAAACAAGGATCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR CCA 90 bp CCATCAGTCAATACCCACTGTAGGTCCTCCTCTTTCTCTACTACGTaGATAACCCCTGTGTCTCCACTAATTGAAGACTGGCAGCCAATC +
Preference number: 1 (lower is better)
Translates to: PSVNTHCRSSSFSTT*ITPVSPLIEDWQPI
Trigger: GATTGGCTGCCAGTCTTCAATTAGTGGAGACACAGGGGTTATCCACGTAGTAGAGAAAGAGGAGGACCTACAGTGGGTATTGACTGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000467837.5
3UTR CCA 90 bp GCTAGGCAACAAATGATCAGAGAACTACCCAGTCCAGGGAACCAATaGAATGTCACTGAGTTCCTGATTCTTCCCAGCAGCAACAACAGC +
Preference number: 1 (lower is better)
Translates to: ARQQMIRELPSPGNQ*NVTEFLILPSSNNS
Trigger: GCTGTTGTTGCTGCTGGGAAGAATCAGGAACTCAGTGACATTCCATTGGTTCCCTGGACTGGGTAGTTCTCTGATCATTTGTTGCCTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459963.5
3UTR TCA 90 bp AATGATCAGAGAACTACCCAGTCCAGGGAACCAATGGAATGTCACTaGGTTCCTGATTCTTCCCAGCAGCAACAACAGCTGTGGTGTTCA +
Preference number: 1 (lower is better)
Translates to: NDQRTTQSREPMECH*VPDSSQQQQQLWCS
Trigger: TGAACACCACAGCTGTTGTTGCTGCTGGGAAGAATCAGGAACTCAGTGACATTCCATTGGTTCCCTGGACTGGGTAGTTCTCTGATCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459963.5
3UTR TCA 90 bp GTGGCCAGGAGATCCTCCACCTGGTTCCGTACAGACTCATTTTTCTaGGAAACAGGATCTGTGTGCATCCAAAGCTCTAATGAAGTTCTT +
Preference number: 1 (lower is better)
Translates to: VARRSSTWFRTDSFF*ETGSVCIQSSNEVL
Trigger: AAGAACTTCATTAGAGCTTTGGATGCACACAGATCCTGTTTCTCAGAAAAATGAGTCTGTACGGAACCAGGTGGAGGATCTCCTGGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR CCA 90 bp ATTGCCCAGCGAATTCCACTGTATTTCTCTGCAGTGAGCAAACTCTaGCCCATAGGAATTGGAGTAAACACCAAACCCATCATTTGGGCA +
Preference number: 1 (lower is better)
Translates to: IAQRIPLYFSAVSKL*PIGIGVNTKPIIWA
Trigger: TGCCCAAATGATGGGTTTGGTGTTTACTCCAATTCCTATGGGCCAGAGTTTGCTCACTGCAGAGAAATACAGTGGAATTCGCTGGGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000467837.5
3UTR TCA 90 bp CTTACCCTGTCTCACAGGCCCTGGTTCCGTACAGACTCATTTTTCTaGGAAACAGGATCTGTGTGCATCCAAAGCTCTAATGAAGTTCTT +
Preference number: 1 (lower is better)
Translates to: LTLSHRPWFRTDSFF*ETGSVCIQSSNEVL
Trigger: AAGAACTTCATTAGAGCTTTGGATGCACACAGATCCTGTTTCTCAGAAAAATGAGTCTGTACGGAACCAGGGCCTGTGAGACAGGGTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459963.5
3UTR-3UTR CCA 90 bp GGTTCCTCCTGCAAGCTCATACAGAGCACGTCCCAGCACCGTGGCCACATCTGCAGGCTGGGACTGATTTaGCCTCCTGAGGATGACAGC +
Preference number: 2 (lower is better)
Translates to: GSSCKLIQSTSQHRGHICRLGLI*PPEDDS
Trigger: GCTGTCATCCTCAGGAGGCCAAATCAGTCCCAGCCT...GCAGATGTGGCCACGGTGCTGGGACGTGCTCTGTATGAGCTTGCAGGAGGAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
3UTR-3UTR CCA 90 bp TCGCTGAAGTTGGTTCCTCCTGCAAGCTCATACAGAGCACGTCCCAGCACCGTGGACTATCCAGCCGGGTaGCAGCAACCACAACCCTGT +
Preference number: 2 (lower is better)
Translates to: SLKLVPPASSYRARPSTVDYPAG*QQPQPC
Trigger: ACAGGGTTGTGGTTGCTGCCACCCGGCTGGATAGTC...CACGGTGCTGGGACGTGCTCTGTATGAGCTTGCAGGAGGAACCAACTTCAGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
3UTR CAA 90 bp TTTGGGCACTGTACACTAGGAGAGAAGCCTGAGGCAGGACTGGGCTaGGTCAAGGACACTGCAAGACCAGCAATTCGGCTGGTTCTCCCT +
Preference number: 2 (lower is better)
Translates to: FGHCTLGEKPEAGLG*VKDTARPAIRLVLP
Trigger: AGGGAGAACCAGCCGAATTGCTGGTCTTGCAGTGTCCTTGACCAAGCCCAGTCCTGCCTCAGGCTTCTCTCCTAGTGTACAGTGCCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000467837.5
3UTR-3UTR TCA 90 bp CCTGAGGCAGGACTGGGCTTGGTCAAGGACACTGCAAGACCAGCAATTCGGCTGTATCTTCCTCTCCACTaGGTTTCCCCTGCACAAACT +
Preference number: 2 (lower is better)
Translates to: PEAGLGLVKDTARPAIRLYLPLH*VSPAQT
Trigger: AGTTTGTGCAGGGGAAACTCAGTGGAGAGGAAGATA...CAGCCGAATTGCTGGTCTTGCAGTGTCCTTGACCAAGCCCAGTCCTGCCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR-3UTR TCA 90 bp AGGCAGGACTGGGCTTGGTCAAGGACACTGCAAGACCAGCAATTCGGCTGGTTCTATCTTCCTCTCCACTaGGTTTCCCCTGCACAAACC +
Preference number: 2 (lower is better)
Translates to: RQDWAWSRTLQDQQFGWFYLPLH*VSPAQT
Trigger: GGTTTGTGCAGGGGAAACTCAGTGGAGAGGAAGATA...GAACCAGCCGAATTGCTGGTCTTGCAGTGTCCTTGACCAAGCCCAGTCCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467837.5
3UTR-3UTR GCA 90 bp CTGTGTGCATCCAAAGCTCTAATGAAGTTCTTAAGGCCACCTGTCCCAGCTCCAGACAAAGGAAGCCACTaGGCTTTCAGCCCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: LCASKALMKFLRPPVPAPDKGSH*AFSPWG
Trigger: GCCCCAGGGGCTGAAAGCGCAGTGGCTTCCTTTGTC...TGGAGCTGGGACAGGTGGCCTTAAGAACTTCATTAGAGCTTTGGATGCACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
3UTR-3UTR GCA 90 bp CCAGCACCACTCTTCTCCAATGTGGCCAGGAGATCCTCCACCTGGTTCCGTACAGGTGGTCACATCAGGTaGCTTTTGCAAAGCTTCAGC +
Preference number: 2 (lower is better)
Translates to: PAPLFSNVARRSSTWFRTGGHIR*LLQSFS
Trigger: GCTGAAGCTTTGCAAAAGGCACCTGATGTGACCACC...TGTACGGAACCAGGTGGAGGATCTCCTGGCCACATTGGAGAAGAGTGGTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR-3UTR CCA 90 bp TCGCTGAAGTTGGTTCCTCCTGCAAGCTCATACAGAGCACGTCCCAGCACCGTGGACCAGCAATTCGGCTaGTTCTCCCTTTCAGCTTCT +
Preference number: 2 (lower is better)
Translates to: SLKLVPPASSYRARPSTVDQQFG*FSLSAS
Trigger: AGAAGCTGAAAGGGAGAACCAGCCGAATTGCTGGTC...CACGGTGCTGGGACGTGCTCTGTATGAGCTTGCAGGAGGAACCAACTTCAGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR-3UTR TCA 90 bp TCATTTGGGCACTGTACACTAGGAGAGAAGCCTGAGGCAGGACTGGGCTTGGTCCCAGGGAGGTTCCAGTaGCAAATTAGTGGTTGTGTC +
Preference number: 2 (lower is better)
Translates to: SFGHCTLGEKPEAGLGLVPGRFQ*QISGCV
Trigger: GACACAACCACTAATTTGTCACTGGAACCTCCCTGG...GACCAAGCCCAGTCCTGCCTCAGGCTTCTCTCCTAGTGTACAGTGCCCAAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR-3UTR TCA 90 bp AGGTCCTGCCTGAGGATAGACTGGAACCATGAGTTGTTGGCTTTAATCAGGAACGGGAGAGGCTGGGACTaGTTTGGCCTCCTGAGGATG +
Preference number: 2 (lower is better)
Translates to: RSCLRIDWNHELLALIRNGRGWD*FGLLRM
Trigger: CATCCTCAGGAGGCCAAATCAGTCCCAGCCTCTCCC...GTTCCTGATTAAAGCCAACAACTCATGGTTCCAGTCTATCCTCAGGCAGGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
3UTR-3UTR TCA 90 bp GTGAGCAAACTCTGGCCCATAGGAATTGGAGTAAACACCAAACCCATCATTTGGTCTGATGAGTGGCGTTaGGCAGGCGAACACAGGGAG +
Preference number: 2 (lower is better)
Translates to: VSKLWPIGIGVNTKPIIWSDEWR*AGEHRE
Trigger: CTCCCTGTGTTCGCCTGCTCAACGCCACTCATCAGA...CCAAATGATGGGTTTGGTGTTTACTCCAATTCCTATGGGCCAGAGTTTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000467837.5
3UTR-3UTR TCA 90 bp GGCATACTGTACAACATAAGTGGTGTTGGTGGGGCTGGAGACAGCGATGTAATGGTTTGGGGATCAGCCTaGACTGTGTCGCTGAAGTTG +
Preference number: 2 (lower is better)
Translates to: GILYNISGVGGAGDSDVMVWGSA*TVSLKL
Trigger: CAACTTCAGCGACACAGTTCAGGCTGATCCCCAAAC...CATTACATCGCTGTCTCCAGCCCCACCAACACCACTTATGTTGTACAGTATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR-3UTR GCA 90 bp GCACCAGAGTGGTCAGCCAGAACAACGCCAGAGATGTTTCGAGCTCGAAGAAATACATCAGGTGCCTTTTaGAAAGCTTCAGCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: APEWSARTTPEMFRARRNTSGAF*KASAAA
Trigger: GGCTGCTGCTGAAGCTTTGCAAAAGGCACCTGATGT...ATTTCTTCGAGCTCGAAACATCTCTGGCGTTGTTCTGGCTGACCACTCTGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
3UTR CAA 90 bp TCACTTGGGACTTTACTTGGATCCTGGCACTGCTCTCGGGTGAGGTaGACCACTGTGCCAGTCAAATTTGCCAAGGCATACTGTACAACA +
Preference number: 2 (lower is better)
Translates to: SLGTLLGSWHCSRVR*TTVPVKFAKAYCTT
Trigger: TGTTGTACAGTATGCCTTGGCAAATTTGACTGGCACAGTGGTCAACCTCACCCGAGAGCAGTGCCAGGATCCAAGTAAAGTCCCAAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR CAA 90 bp TTCCTGATTCTTCCCAGCAGCAACAACAGCTGTGGTGTTCATCCTTaGGCCAACACCCAATCCAATCCTGTCTCTTACCCTGTCTCACAG +
Preference number: 2 (lower is better)
Translates to: FLILPSSNNSCGVHP*ANTQSNPVSYPVSQ
Trigger: CTGTGAGACAGGGTAAGAGACAGGATTGGATTGGGTGTTGGCCAAAGGATGAACACCACAGCTGTTGTTGCTGCTGGGAAGAATCAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459963.5
3UTR-3UTR CCA 90 bp TCAGGGGCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGAGCCTGAGGCAGGACTaGGCTTGGTCAAGGACACTG +
Preference number: 2 (lower is better)
Translates to: SGAQCSLTLTLNLLCPSQSLRQD*AWSRTL
Trigger: CAGTGTCCTTGACCAAGCCCAGTCCTGCCTCAGGCT...CTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGCCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR-3UTR CCA 90 bp TTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGCTGGGCATAAGTGGTGTTGGTaGGGCTGGAGACAGCGATGT +
Preference number: 2 (lower is better)
Translates to: FDPDIKPFMSFPVRKVAGHKWCW*GWRQRC
Trigger: ACATCGCTGTCTCCAGCCCCACCAACACCACTTATG...CCCAGCCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR-3UTR GCA 90 bp TTCAGGGCTCAGCCATTCGGGATAGCTCACATTAATGTTCTCAGCAGTGTCGTACTTGGTCAAGGACACTaGAAGACCAGCAATTCGGCT +
Preference number: 2 (lower is better)
Translates to: FRAQPFGIAHINVLSSVVLGQGH*KTSNSA
Trigger: AGCCGAATTGCTGGTCTTGCAGTGTCCTTGACCAAG...TACGACACTGCTGAGAACATTAATGTGAGCTATCCCGAATGGCTGAGCCCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR-3UTR GCA 90 bp GGCATACTGTACAACATAAGTGGTGTTGGTGGGGCTGGAGACAGCGATGTAATGTCCACTGTATTTCTCTaGAGTGAGCAAACTCTGGCC +
Preference number: 2 (lower is better)
Translates to: GILYNISGVGGAGDSDVMSTVFL*SEQTLA
Trigger: GGCCAGAGTTTGCTCACTGCAGAGAAATACAGTGGA...CATTACATCGCTGTCTCCAGCCCCACCAACACCACTTATGTTGTACAGTATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR-3UTR GCA 90 bp TGTCCCAGCTCCACAAATGAGTCAACATTCTCTAACTGCACGGGAAACTTGCCCGTGCTGATGACAGCATaGATGTGTGAAAAGAGCTGC +
Preference number: 2 (lower is better)
Translates to: CPSSTNESTFSNCTGNLPVLMTA*MCEKSC
Trigger: GCAGCTCTTTTCACACATGCATGCTGTCATCAGCAC...GGGCAAGTTTCCCGTGCAGTTAGAGAATGTTGACTCATTTGTGGAGCTGGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR-3UTR CCA 90 bp GAGCAAACTCTGGCCCATAGGAATTGGAGTAAACACCAAACCCATCATTTGGGCGACCAGCAATTCGGCTaGTTCTCCCTTTCAGCTTCT +
Preference number: 2 (lower is better)
Translates to: EQTLAHRNWSKHQTHHLGDQQFG*FSLSAS
Trigger: AGAAGCTGAAAGGGAGAACCAGCCGAATTGCTGGTC...GCCCAAATGATGGGTTTGGTGTTTACTCCAATTCCTATGGGCCAGAGTTTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000467837.5
3UTR-3UTR CCA 90 bp CAGTGTCTGTTACAAAGTTCAGGTCCTCTTCAGGGCTCAGCCATTCGGGATAGCCTGGCCCATAGGAATTaGAGTAAACACCAAACCCAT +
Preference number: 2 (lower is better)
Translates to: QCLLQSSGPLQGSAIRDSLAHRN*SKHQTH
Trigger: ATGGGTTTGGTGTTTACTCCAATTCCTATGGGCCAG...GCTATCCCGAATGGCTGAGCCCTGAAGAGGACCTGAACTTTGTAACAGACACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR-3UTR TCA 90 bp GACCTTAGGTCCTGCCTGAGGATAGACTGGAACCATGAGTTGTTGGCTTTAATCCCAATGGAATGTCACTaGGTTCCTGATTCTTCCCAG +
Preference number: 2 (lower is better)
Translates to: DLRSCLRIDWNHELLALIPMECH*VPDSSQ
Trigger: CTGGGAAGAATCAGGAACTCAGTGACATTCCATTGG...GATTAAAGCCAACAACTCATGGTTCCAGTCTATCCTCAGGCAGGACCTAAGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459963.5
3UTR-3UTR CCA 90 bp CAGTGTCTGTTACAAAGTTCAGGTCCTCTTCAGGGCTCAGCCATTCGGGATAGCAAGGGCAAATTAGGGTaGGTAACTAGGGAGTTAAAC +
Preference number: 2 (lower is better)
Translates to: QCLLQSSGPLQGSAIRDSKGKLG*VTRELN
Trigger: GTTTAACTCCCTAGTTACCCACCCTAATTTGCCCTT...GCTATCCCGAATGGCTGAGCCCTGAAGAGGACCTGAACTTTGTAACAGACACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR-3UTR CCA 90 bp TGTCCCAGCTCCACAAATGAGTCAACATTCTCTAACTGCACGGGAAACTTGCCCACCAAACCCATCATTTaGGCACTGTACACTAGGAGA +
Preference number: 2 (lower is better)
Translates to: CPSSTNESTFSNCTGNLPTKPII*ALYTRR
Trigger: TCTCCTAGTGTACAGTGCCCAAATGATGGGTTTGGT...GGGCAAGTTTCCCGTGCAGTTAGAGAATGTTGACTCATTTGTGGAGCTGGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR-3UTR CCA 90 bp TTCAGGGCTCAGCCATTCGGGATAGCTCACATTAATGTTCTCAGCAGTGTCGTAGCAGTGAGCAAACTCTaGCCCATAGGAATTGGAGTA +
Preference number: 2 (lower is better)
Translates to: FRAQPFGIAHINVLSSVVAVSKL*PIGIGV
Trigger: TACTCCAATTCCTATGGGCCAGAGTTTGCTCACTGC...TACGACACTGCTGAGAACATTAATGTGAGCTATCCCGAATGGCTGAGCCCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR-3UTR CCA 90 bp TCTGGTAATATTTGTTATGGAAGGCACCAGAGTGGTCAGCCAGAACAACGCCAGCAGCAACAACAGCTGTaGTGTTCATCCTTTGGCCAA +
Preference number: 2 (lower is better)
Translates to: SGNICYGRHQSGQPEQRQQQQQL*CSSFGQ
Trigger: TTGGCCAAAGGATGAACACCACAGCTGTTGTTGCTG...CTGGCGTTGTTCTGGCTGACCACTCTGGTGCCTTCCATAACAAATATTACCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459963.5
3UTR-3UTR TCA 90 bp TCAGGGGCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGAGATGCTCTAGGAAGTaGACTGCTGAGCTGGCAAGA +
Preference number: 2 (lower is better)
Translates to: SGAQCSLTLTLNLLCPSQRCSRK*TAELAR
Trigger: TCTTGCCAGCTCAGCAGTTCACTTCCTAGAGCATCT...CTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGCCCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
3UTR-3UTR GCA 90 bp CTGTACAACATAAGTGGTGTTGGTGGGGCTGGAGACAGCGATGTAATGTTGAAGAAATCCCTGGTAAAATaGTTGCTCTCCAGCAGAACC +
Preference number: 2 (lower is better)
Translates to: LYNISGVGGAGDSDVMLKKSLVK*LLSSRT
Trigger: GGTTCTGCTGGAGAGCAAGCATTTTACCAGGGATTT...CTTCAACATTACATCGCTGTCTCCAGCCCCACCAACACCACTTATGTTGTACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR-3UTR GCA 90 bp ACTGTCAGGGTGATCAACTCAAGCTCTTTGCTGGCGATGAGAAATATCCGGGCAAGACCATCCTCGAGCTaGCAATGTAGTCAAAAGTTT +
Preference number: 2 (lower is better)
Translates to: TVRVINSSSLLAMRNIRARPSSS*QCSQKF
Trigger: AAACTTTTGACTACATTGGCAGCTCGAGGATGGTCT...TGCCCGGATATTTCTCATCGCCAGCAAAGAGCTTGAGTTGATCACCCTGACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR-3UTR TCA 90 bp TATTTCTCTGCAGTGAGCAAACTCTGGCCCATAGGAATTGGAGTAAACACCAAAAGATGCTCTAGGAAGTaGACTGCTGAGCTGGCAAGA +
Preference number: 2 (lower is better)
Translates to: YFSAVSKLWPIGIGVNTKRCSRK*TAELAR
Trigger: TCTTGCCAGCTCAGCAGTTCACTTCCTAGAGCATCT...TTTGGTGTTTACTCCAATTCCTATGGGCCAGAGTTTGCTCACTGCAGAGAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR-3UTR TCA 90 bp GCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGACCAGGGAGGTTCCAGTaGCAAATTAGTGGTTGTGTC +
Preference number: 2 (lower is better)
Translates to: AQCSLTLTLNLLCPSQSGPGRFQ*QISGCV
Trigger: GACACAACCACTAATTTGTCACTGGAACCTCCCTGG...TCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
3UTR-3UTR GCA 90 bp AGGTCCTGCCTGAGGATAGACTGGAACCATGAGTTGTTGGCTTTAATCAGGAACAGACCATCCTCGAGCTaGCAATGTAGTCAAAAGTTT +
Preference number: 2 (lower is better)
Translates to: RSCLRIDWNHELLALIRNRPSSS*QCSQKF
Trigger: AAACTTTTGACTACATTGGCAGCTCGAGGATGGTCT...GTTCCTGATTAAAGCCAACAACTCATGGTTCCAGTCTATCCTCAGGCAGGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
3UTR-3UTR GCA 90 bp AGGGCTCAGCCATTCGGGATAGCTCACATTAATGTTCTCAGCAGTGTCGTAAATTCAACATTCTCTAACTaGACGGGAAACTTGCCCTTC +
Preference number: 2 (lower is better)
Translates to: RAQPFGIAHINVLSSVVNSTFSN*TGNLPF
Trigger: GAAGGGCAAGTTTCCCGTGCAGTTAGAGAATGTTGA...ATTTACGACACTGCTGAGAACATTAATGTGAGCTATCCCGAATGGCTGAGCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
3UTR-3UTR CCA 90 bp CCGGGGAGCAATGAAAAGGACATCAGCTTTGGCATTGATGCAGTAGGTGACGATTCTCCCTGTCTCTTTTaGATAGTTCCACTCTTTTAT +
Preference number: 2 (lower is better)
Translates to: PGSNEKDISFGIDAVGDDSPCLF*IVPLFY
Trigger: ATAAAAGAGTGGAACTATCCAAAAGAGACAGGGAGA...ATCGTCACCTACTGCATCAATGCCAAAGCTGATGTCCTTTTCATTGCTCCCCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR-3UTR CCA 90 bp TGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGAAGGGCAAATTAGGGTaGGTAACTAGGGAGTTAAAC +
Preference number: 2 (lower is better)
Translates to: CSLTLTLNLLCPSQSGRWKGKLG*VTRELN
Trigger: GTTTAACTCCCTAGTTACCCACCCTAATTTGCCCTT...CCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
3UTR-3UTR CCA 90 bp TCAGGGGCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCTCCCTGTCTCTTTTaGATAGTTCCACTCTTTTAT +
Preference number: 2 (lower is better)
Translates to: SGAQCSLTLTLNLLCPSQSPCLF*IVPLFY
Trigger: ATAAAAGAGTGGAACTATCCAAAAGAGACAGGGAGA...CTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGCCCCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
3UTR-3UTR CCA 90 bp ATTAATGTTCTCAGCAGTGTCGTAAATACTCTGGTAATATTTGTTATGGAAGGCTCTTTCTCTACTACGTaGATAACCCCTGTGTCTCCA +
Preference number: 2 (lower is better)
Translates to: INVLSSVVNTLVIFVMEGSFSTT*ITPVSP
Trigger: TGGAGACACAGGGGTTATCCACGTAGTAGAGAAAGA...GCCTTCCATAACAAATATTACCAGAGTATTTACGACACTGCTGAGAACATTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR-3UTR TCA 90 bp ATTAATGTTCTCAGCAGTGTCGTAAATACTCTGGTAATATTTGTTATGGAAGGCACAGACTCATTTTTCTaGGAAACAGGATCTGTGTGC +
Preference number: 2 (lower is better)
Translates to: INVLSSVVNTLVIFVMEGTDSFF*ETGSVC
Trigger: GCACACAGATCCTGTTTCTCAGAAAAATGAGTCTGT...GCCTTCCATAACAAATATTACCAGAGTATTTACGACACTGCTGAGAACATTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
3UTR CCA 72 bp CTCCTGCAAGCTCATACAGAGCACGTCCCAGCACCGTaGCCACATCTGCCAGGGCCTTGGCAGTGTCTGTTA +
Preference number: 3 (lower is better)
Translates to: LLQAHTEHVPAP*PHLPGPWQCLL
Trigger: TAACAGACACTGCCAAGGCCCTGGCAGATGTGGCCACGGTGCTGGGACGTGCTCTGTATGAGCTTGCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
3UTR GCA 72 bp ACATTGCGGGGCAGGGTGGTCACATCAGGTGCCTTTTaGAAAGCTTCAGCAGCAGCCAGCTGGGTGACAAAG +
Preference number: 3 (lower is better)
Translates to: TLRGRVVTSGAF*KASAAASWVTK
Trigger: CTTTGTCACCCAGCTGGCTGCTGCTGAAGCTTTGCAAAAGGCACCTGATGTGACCACCCTGCCCCGCAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
3UTR GCA 72 bp ATCAGCCTGAACTGTGTCGCTGAAGTTGGTTCCTCCTaGAAGCTCATACAGAGCACGTCCCAGCACCGTGGC +
Preference number: 3 (lower is better)
Translates to: ISLNCVAEVGSS*KLIQSTSQHRG
Trigger: GCCACGGTGCTGGGACGTGCTCTGTATGAGCTTGCAGGAGGAACCAACTTCAGCGACACAGTTCAGGCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
3UTR GCA 72 bp CGCACACACCGGGGGAGTCGGTCCGTCTCATTAGAATaGAAAGGGCCCTGGACCCATGAGTACTCATACAGA +
Preference number: 3 (lower is better)
Translates to: RTHRGSRSVSLE*KGPWTHEYSYR
Trigger: TCTGTATGAGTACTCATGGGTCCAGGGCCCTTTGCATTCTAATGAGACGGACCGACTCCCCCGGTGTGTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR CCA 72 bp TCACAGACGATTTCTGGGTTGATGCTGAAGGTGCTTTaGATGGAGCTGCGCCGCATGCAGGTGGCAGTGCTG +
Preference number: 3 (lower is better)
Translates to: SQTISGLMLKVL*MELRRMQVAVL
Trigger: CAGCACTGCCACCTGCATGCGGCGCAGCTCCATCCAAAGCACCTTCAGCATCAACCCAGAAATCGTCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR TCA 72 bp CCCATCATTTGGGCACTGTACACTAGGAGAGAAGCCTaGGGCAGGACTGGGCTTGGTCAAGGACACTGCAAG +
Preference number: 3 (lower is better)
Translates to: PIIWALYTRREA*GRTGLGQGHCK
Trigger: CTTGCAGTGTCCTTGACCAAGCCCAGTCCTGCCTCAGGCTTCTCTCCTAGTGTACAGTGCCCAAATGATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000467837.5
3UTR CCA 72 bp CTGGGTGACAAAGGAAGCCACTGCGCTTTCAGCCCCTaGGGCCACATTCCAGAAAAAGGAACGACTATCCAG +
Preference number: 3 (lower is better)
Translates to: LGDKGSHCAFSP*GHIPEKGTTIQ
Trigger: CTGGATAGTCGTTCCTTTTTCTGGAATGTGGCCCCAGGGGCTGAAAGCGCAGTGGCTTCCTTTGTCACCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
3UTR-3UTR CAA 90 bp GGCATACTGTACAACATAAGTGGTGTTGGTGGGGCTGGAGACAGCGATGTAATGACATCTGCCAGGGCCTaGGCAGTGTCTGTTACAAAG +
Preference number: 3 (lower is better)
Translates to: GILYNISGVGGAGDSDVMTSARA*AVSVTK
Trigger: CTTTGTAACAGACACTGCCAAGGCCCTGGCAGATGT...CATTACATCGCTGTCTCCAGCCCCACCAACACCACTTATGTTGTACAGTATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR-3UTR CAA 90 bp TTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGCTGGGTGCTCTCGGGTGAGGTaGACCACTGTGCCAGTCAAA +
Preference number: 3 (lower is better)
Translates to: FDPDIKPFMSFPVRKVAGCSRVR*TTVPVK
Trigger: TTTGACTGGCACAGTGGTCAACCTCACCCGAGAGCA...CCCAGCCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR TCA 72 bp CCAGTCCAGGGAACCAATGGAATGTCACTGAGTTCCTaGTTCTTCCCAGCAGCAACAACAGCTGTGGTGTTC +
Preference number: 3 (lower is better)
Translates to: PVQGTNGMSLSS*FFPAATTAVVF
Trigger: GAACACCACAGCTGTTGTTGCTGCTGGGAAGAATCAGGAACTCAGTGACATTCCATTGGTTCCCTGGACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459963.5
3UTR CCA 72 bp GCTTGGTCAAGGACACTGCAAGACCAGCAATTCGGCTaGTTCTCCCTTTCAGCTTCTCCATTAAATCCCTGG +
Preference number: 3 (lower is better)
Translates to: AWSRTLQDQQFG*FSLSASPLNPW
Trigger: CCAGGGATTTAATGGAGAAGCTGAAAGGGAGAACCAGCCGAATTGCTGGTCTTGCAGTGTCCTTGACCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000467837.5
3UTR CCA 72 bp AGGCATACTGTACAACATAAGTGGTGTTGGTGGGGCTaGAGACAGCGATGTAATGTTGAAGAGGCCCGTCAC +
Preference number: 3 (lower is better)
Translates to: RHTVQHKWCWWG*RQRCNVEEARH
Trigger: GTGACGGGCCTCTTCAACATTACATCGCTGTCTCCAGCCCCACCAACACCACTTATGTTGTACAGTATGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR CCA 72 bp AGATCCTTGTTTTCACTTGGGACTTTACTTGGATCCTaGCACTGCTCTCGGGTGAGGTTGACCACTGTGCCA +
Preference number: 3 (lower is better)
Translates to: RSLFSLGTLLGS*HCSRVRLTTVP
Trigger: TGGCACAGTGGTCAACCTCACCCGAGAGCAGTGCCAGGATCCAAGTAAAGTCCCAAGTGAAAACAAGGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR CCA 72 bp TTCCCAGCAGCAACAACAGCTGTGGTGTTCATCCTTTaGCCAACACCCAATCCAATCCTGTCTCTTACCCTG +
Preference number: 3 (lower is better)
Translates to: FPAATTAVVFIL*PTPNPILSLTL
Trigger: CAGGGTAAGAGACAGGATTGGATTGGGTGTTGGCCAAAGGATGAACACCACAGCTGTTGTTGCTGCTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459963.5
3UTR-3UTR CAA 90 bp CTCTTCAGGGCTCAGCCATTCGGGATAGCTCACATTAATGTTCTCAGCAGTGTCTCCCTGGTAAAATGCTaGCTCTCCAGCAGAACCATG +
Preference number: 3 (lower is better)
Translates to: LFRAQPFGIAHINVLSSVSLVKC*LSSRTM
Trigger: CATGGTTCTGCTGGAGAGCAAGCATTTTACCAGGGA...GACACTGCTGAGAACATTAATGTGAGCTATCCCGAATGGCTGAGCCCTGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR GCA 72 bp TTGTTTTCACTTGGGACTTTACTTGGATCCTGGCACTaGTCTCGGGTGAGGTTGACCACTGTGCCAGTCAAA +
Preference number: 3 (lower is better)
Translates to: LFSLGTLLGSWH*SRVRLTTVPVK
Trigger: TTTGACTGGCACAGTGGTCAACCTCACCCGAGAGCAGTGCCAGGATCCAAGTAAAGTCCCAAGTGAAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR CCA 72 bp TTGCCAAGGCATACTGTACAACATAAGTGGTGTTGGTaGGGCTGGAGACAGCGATGTAATGTTGAAGAGGCC +
Preference number: 3 (lower is better)
Translates to: LPRHTVQHKWCW*GWRQRCNVEEA
Trigger: GGCCTCTTCAACATTACATCGCTGTCTCCAGCCCCACCAACACCACTTATGTTGTACAGTATGCCTTGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR CCA 72 bp GGGAGTCGGTCCGTCTCATTAGAATGCAAAGGGCCCTaGACCCATGAGTACTCATACAGATCCTTGTTTTCA +
Preference number: 3 (lower is better)
Translates to: GSRSVSLECKGP*THEYSYRSLFS
Trigger: TGAAAACAAGGATCTGTATGAGTACTCATGGGTCCAGGGCCCTTTGCATTCTAATGAGACGGACCGACTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR-3UTR CAA 90 bp CTGTGTGCATCCAAAGCTCTAATGAAGTTCTTAAGGCCACCTGTCCCAGCTCCATGTGGTGTTCATCCTTaGGCCAACACCCAATCCAAT +
Preference number: 3 (lower is better)
Translates to: LCASKALMKFLRPPVPAPCGVHP*ANTQSN
Trigger: ATTGGATTGGGTGTTGGCCAAAGGATGAACACCACA...TGGAGCTGGGACAGGTGGCCTTAAGAACTTCATTAGAGCTTTGGATGCACACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459963.5
3UTR TCA 72 bp GTCCGTCTCATTAGAATGCAAAGGGCCCTGGACCCATaGGTACTCATACAGATCCTTGTTTTCACTTGGGAC +
Preference number: 3 (lower is better)
Translates to: VRLIRMQRALDP*VLIQILVFTWD
Trigger: GTCCCAAGTGAAAACAAGGATCTGTATGAGTACTCATGGGTCCAGGGCCCTTTGCATTCTAATGAGACGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR TCA 72 bp TCCTTAATGGGCAGTGGTAGTCTGCTAGGCAACAAATaGTCAGAGAACTACCCAGTCCAGGGAACCAATGGA +
Preference number: 3 (lower is better)
Translates to: SLMGSGSLLGNK*SENYPVQGTNG
Trigger: TCCATTGGTTCCCTGGACTGGGTAGTTCTCTGATCATTTGTTGCCTAGCAGACTACCACTGCCCATTAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459963.5
3UTR GCA 72 bp CAAATGAGTCAACATTCTCTAACTGCACGGGAAACTTaGCCTTCTCCATATCGTAGACCATCCTCGAGCTGC +
Preference number: 3 (lower is better)
Translates to: QMSQHSLTARET*PSPYRRPSSSC
Trigger: GCAGCTCGAGGATGGTCTACGATATGGAGAAGGGCAAGTTTCCCGTGCAGTTAGAGAATGTTGACTCATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
3UTR-3UTR CAA 90 bp GGTTGGGGCCATCAGTCAATACCCACTGTAGGTCCTCCTCTTTCTCTACTACGTTTCTCCCTGTCTCTTTaGGATAGTTCCACTCTTTTA +
Preference number: 3 (lower is better)
Translates to: GWGHQSIPTVGPPLSLLRFSLSL*DSSTLL
Trigger: TAAAAGAGTGGAACTATCCAAAAGAGACAGGGAGAA...ACGTAGTAGAGAAAGAGGAGGACCTACAGTGGGTATTGACTGATGGCCCCAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR CCA 72 bp AATACCCACTGTAGGTCCTCCTCTTTCTCTACTACGTaGATAACCCCTGTGTCTCCACTAATTGAAGACTGG +
Preference number: 3 (lower is better)
Translates to: NTHCRSSSFSTT*ITPVSPLIEDW
Trigger: CCAGTCTTCAATTAGTGGAGACACAGGGGTTATCCACGTAGTAGAGAAAGAGGAGGACCTACAGTGGGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000467837.5
3UTR CCA 72 bp AATTTGCCAAGGCATACTGTACAACATAAGTGGTGTTaGTGGGGCTGGAGACAGCGATGTAATGTTGAAGAG +
Preference number: 3 (lower is better)
Translates to: NLPRHTVQHKWC*WGWRQRCNVEE
Trigger: CTCTTCAACATTACATCGCTGTCTCCAGCCCCACCAACACCACTTATGTTGTACAGTATGCCTTGGCAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR-3UTR CAA 90 bp TGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGTTCTCCCTGTCTCTTTaGGATAGTTCCACTCTTTTA +
Preference number: 3 (lower is better)
Translates to: CSLTLTLNLLCPSQSGRWFSLSL*DSSTLL
Trigger: TAAAAGAGTGGAACTATCCAAAAGAGACAGGGAGAA...CCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CCA 90 bp GAGCACGTCCCAGCACCGTGGCCACATCTGCCAGGGCCTTGGCAGTGTCTGTTAAGCCTGAGGCAGGACTaGGCTTGGTCAAGGACACTG +
Preference number: 4 (lower is better)
Translates to: EHVPAPWPHLPGPWQCLLSLRQD*AWSRTL
Trigger: CAGTGTCCTTGACCAAGCCCAGTCCTGCCTCAGGCT...TAACAGACACTGCCAAGGCCCTGGCAGATGTGGCCACGGTGCTGGGACGTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR CCA 90 bp TCCTCCTGCAAGCTCATACAGAGCACGTCCCAGCACCGTGGCCACATCTGCCAGGACTATCCAGCCGGGTaGCAGCAACCACAACCCTGT +
Preference number: 4 (lower is better)
Translates to: SSCKLIQSTSQHRGHICQDYPAG*QQPQPC
Trigger: ACAGGGTTGTGGTTGCTGCCACCCGGCTGGATAGTC...CTGGCAGATGTGGCCACGGTGCTGGGACGTGCTCTGTATGAGCTTGCAGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR TCA 90 bp TACAGAGCACGTCCCAGCACCGTGGCCACATCTGCCAGGGCCTTGGCAGTGTCTGTTTGGGGATCAGCCTaGACTGTGTCGCTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: YRARPSTVATSARALAVSVWGSA*TVSLKL
Trigger: CAACTTCAGCGACACAGTTCAGGCTGATCCCCAAAC...AGACACTGCCAAGGCCCTGGCAGATGTGGCCACGGTGCTGGGACGTGCTCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR TCA 90 bp TCCTCCTGCAAGCTCATACAGAGCACGTCCCAGCACCGTGGCCACATCTGCCAGGCTCCCGGGGAGCAATaGAAAGGACATCAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: SSCKLIQSTSQHRGHICQAPGEQ*KGHQLW
Trigger: CCAAAGCTGATGTCCTTTTCATTGCTCCCCGGGAGC...CTGGCAGATGTGGCCACGGTGCTGGGACGTGCTCTGTATGAGCTTGCAGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR GCA 90 bp TCCAGCCGGGTGGCAGCAACCACAACCCTGTCGTCAGGCTTTAATGTCCCAGTTGACAAAGGAAGCCACTaGGCTTTCAGCCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SSRVAATTTLSSGFNVPVDKGSH*AFSPWG
Trigger: GCCCCAGGGGCTGAAAGCGCAGTGGCTTCCTTTGTC...AACTGGGACATTAAAGCCTGACGACAGGGTTGTGGTTGCTGCCACCCGGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR TCA 90 bp CAGGACTGGGCTTGGTCAAGGACACTGCAAGACCAGCAATTCGGCTGGTTCTCCACTAGGAGAGAAGCCTaGGGCAGGACTGGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: QDWAWSRTLQDQQFGWFSTRREA*GRTGLG
Trigger: ACCAAGCCCAGTCCTGCCTCAGGCTTCTCTCCTAGT...GGAGAACCAGCCGAATTGCTGGTCTTGCAGTGTCCTTGACCAAGCCCAGTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000467837.5
CDS-3UTR TCA 90 bp TGGCCAACACCCAATCCAATCCTGTCTCTTACCCTGTCTCACAGGCCCTGGTTCGGGAGAGGCTGGGACTaGTTTGGCCTCCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: WPTPNPILSLTLSHRPWFGRGWD*FGLLRM
Trigger: CATCCTCAGGAGGCCAAATCAGTCCCAGCCTCTCCC...GAACCAGGGCCTGTGAGACAGGGTAAGAGACAGGATTGGATTGGGTGTTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459963.5
CDS-3UTR GCA 90 bp GCCACATTCCAGAAAAAGGAACGACTATCCAGCCGGGTGGCAGCAACCACAACCGACAAAGGAAGCCACTaGGCTTTCAGCCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: ATFQKKERLSSRVAATTTDKGSH*AFSPWG
Trigger: GCCCCAGGGGCTGAAAGCGCAGTGGCTTCCTTTGTC...GGTTGTGGTTGCTGCCACCCGGCTGGATAGTCGTTCCTTTTTCTGGAATGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR GCA 90 bp TCCTCCTGCAAGCTCATACAGAGCACGTCCCAGCACCGTGGCCACATCTGCCAGGCTCGAAGAAATCGCTaGAGGGAAGATGGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: SSCKLIQSTSQHRGHICQARRNR*REDGGR
Trigger: TCTCCCACCATCTTCCCTGCAGCGATTTCTTCGAGC...CTGGCAGATGTGGCCACGGTGCTGGGACGTGCTCTGTATGAGCTTGCAGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR GCA 90 bp GTCGCTGAAGTTGGTTCCTCCTGCAAGCTCATACAGAGCACGTCCCAGCACCGTACGCCCACCCTAATGTaGCATCTGAGGGCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: VAEVGSSCKLIQSTSQHRTPTLM*HLRAWR
Trigger: TCTCCAGGCCCTCAGATGGCACATTAGGGTGGGCGT...ACGGTGCTGGGACGTGCTCTGTATGAGCTTGCAGGAGGAACCAACTTCAGCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR CCA 90 bp CTGGCAGCCAATCTGATGAGTGGCGTTGAGCAGGCGAACACAGGGAGCTGTTTTCTTTCGACTGTGGGGTaGGTGGCTGGGGTTGTGGGA +
Preference number: 4 (lower is better)
Translates to: LAANLMSGVEQANTGSCFLSTVG*VAGVVG
Trigger: TCCCACAACCCCAGCCACCCACCCCACAGTCGAAAG...AAAACAGCTCCCTGTGTTCGCCTGCTCAACGCCACTCATCAGATTGGCTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000467837.5
CDS-3UTR TCA 90 bp TCCAGCCGGGTGGCAGCAACCACAACCCTGTCGTCAGGCTTTAATGTCCCAGTTGCTCTTTGCTGGCGATaGGAAATATCCGGGCACGGA +
Preference number: 4 (lower is better)
Translates to: SSRVAATTTLSSGFNVPVALCWR*EISGHG
Trigger: TCCGTGCCCGGATATTTCTCATCGCCAGCAAAGAGC...AACTGGGACATTAAAGCCTGACGACAGGGTTGTGGTTGCTGCCACCCGGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR GCA 90 bp GGTTCCTCCTGCAAGCTCATACAGAGCACGTCCCAGCACCGTGGCCACATCTGCACATCAGGTGCCTTTTaGAAAGCTTCAGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: GSSCKLIQSTSQHRGHICTSGAF*KASAAA
Trigger: GGCTGCTGCTGAAGCTTTGCAAAAGGCACCTGATGT...GCAGATGTGGCCACGGTGCTGGGACGTGCTCTGTATGAGCTTGCAGGAGGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR GCA 90 bp TGTCTGTTACAAAGTTCAGGTCCTCTTCAGGGCTCAGCCATTCGGGATAGCTCAGGCTCAGCCCAGAGATaGCCCTGTCCTCAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: CLLQSSGPLQGSAIRDSSGSAQR*PCPQGL
Trigger: GAGCCCCTGAGGACAGGGGCATCTCTGGGCTGAGCC...TGAGCTATCCCGAATGGCTGAGCCCTGAAGAGGACCTGAACTTTGTAACAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR CCA 90 bp TCCTCCTGCAAGCTCATACAGAGCACGTCCCAGCACCGTGGCCACATCTGCCAGGACCAGCAATTCGGCTaGTTCTCCCTTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SSCKLIQSTSQHRGHICQDQQFG*FSLSAS
Trigger: AGAAGCTGAAAGGGAGAACCAGCCGAATTGCTGGTC...CTGGCAGATGTGGCCACGGTGCTGGGACGTGCTCTGTATGAGCTTGCAGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR CCA 90 bp CAGGACTGGGCTTGGTCAAGGACACTGCAAGACCAGCAATTCGGCTGGTTCTCCGGGTGGCTGGGGTTGTaGGAAAAACGAGACATCTGG +
Preference number: 4 (lower is better)
Translates to: QDWAWSRTLQDQQFGWFSGWLGL*EKRDIW
Trigger: CCAGATGTCTCGTTTTTCCCACAACCCCAGCCACCC...GGAGAACCAGCCGAATTGCTGGTCTTGCAGTGTCCTTGACCAAGCCCAGTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467837.5
CDS-3UTR CCA 90 bp CTGGCAGCCAATCTGATGAGTGGCGTTGAGCAGGCGAACACAGGGAGCTGTTTTTGTTCCTTTCGACTGTaGGGTGGGTGGCTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: LAANLMSGVEQANTGSCFCSFRL*GGWLGL
Trigger: CAACCCCAGCCACCCACCCCACAGTCGAAAGGAACA...AAAACAGCTCCCTGTGTTCGCCTGCTCAACGCCACTCATCAGATTGGCTGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467837.5
3UTR CAA 72 bp GTCACAGACGATTTCTGGGTTGATGCTGAAGGTGCTTaGGATGGAGCTGCGCCGCATGCAGGTGGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: VTDDFWVDAEGA*DGAAPHAGGSA
Trigger: AGCACTGCCACCTGCATGCGGCGCAGCTCCATCCAAAGCACCTTCAGCATCAACCCAGAAATCGTCTGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR TCA 90 bp AGCCTGAGGCAGGACTGGGCTTGGTCAAGGACACTGCAAGACCAGCAATTCGGCGACAGCATGCATGTGTaGAAAGAGCTGCATGGCACA +
Preference number: 4 (lower is better)
Translates to: SLRQDWAWSRTLQDQQFGDSMHV*KELHGT
Trigger: TGTGCCATGCAGCTCTTTTCACACATGCATGCTGTC...GCCGAATTGCTGGTCTTGCAGTGTCCTTGACCAAGCCCAGTCCTGCCTCAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR TCA 90 bp AGGCAGGACTGGGCTTGGTCAAGGACACTGCAAGACCAGCAATTCGGCTGGTTCAGCCCACTGTCAGGGTaGTCAACTCAAGCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: RQDWAWSRTLQDQQFGWFSPLSG*STQALC
Trigger: GCAAAGAGCTTGAGTTGATCACCCTGACAGTGGGCT...GAACCAGCCGAATTGCTGGTCTTGCAGTGTCCTTGACCAAGCCCAGTCCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR GCA 90 bp TACAGAGCACGTCCCAGCACCGTGGCCACATCTGCCAGGGCCTTGGCAGTGTCTTCAACATTCTCTAACTaGACGGGAAACTTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: YRARPSTVATSARALAVSSTFSN*TGNLPF
Trigger: GAAGGGCAAGTTTCCCGTGCAGTTAGAGAATGTTGA...AGACACTGCCAAGGCCCTGGCAGATGTGGCCACGGTGCTGGGACGTGCTCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR CCA 90 bp CAGGACTGGGCTTGGTCAAGGACACTGCAAGACCAGCAATTCGGCTGGTTCTCCTGCGCTTTCAGCCCCTaGGGCCACATTCCAGAAAAA +
Preference number: 4 (lower is better)
Translates to: QDWAWSRTLQDQQFGWFSCAFSP*GHIPEK
Trigger: TTTTTCTGGAATGTGGCCCCAGGGGCTGAAAGCGCA...GGAGAACCAGCCGAATTGCTGGTCTTGCAGTGTCCTTGACCAAGCCCAGTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR CCA 90 bp GGCAGGACTGGGCTTGGTCAAGGACACTGCAAGACCAGCAATTCGGCTGGTTCTCACTCTTCTCCAATGTaGCCAGGAGATCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: GRTGLGQGHCKTSNSAGSHSSPM*PGDPPP
Trigger: AGGTGGAGGATCTCCTGGCCACATTGGAGAAGAGTG...AGAACCAGCCGAATTGCTGGTCTTGCAGTGTCCTTGACCAAGCCCAGTCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR CCA 90 bp GTCGCTGAAGTTGGTTCCTCCTGCAAGCTCATACAGAGCACGTCCCAGCACCGTCACTCTTCTCCAATGTaGCCAGGAGATCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: VAEVGSSCKLIQSTSQHRHSSPM*PGDPPP
Trigger: AGGTGGAGGATCTCCTGGCCACATTGGAGAAGAGTG...ACGGTGCTGGGACGTGCTCTGTATGAGCTTGCAGGAGGAACCAACTTCAGCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR CCA 90 bp CAGGGCCTTGGCAGTGTCTGTTACAAAGTTCAGGTCCTCTTCAGGGCTCAGCCATGGAAGGCACCAGAGTaGTCAGCCAGAACAACGCCA +
Preference number: 4 (lower is better)
Translates to: QGLGSVCYKVQVLFRAQPWKAPE*SARTTP
Trigger: TGGCGTTGTTCTGGCTGACCACTCTGGTGCCTTCCA...TGGCTGAGCCCTGAAGAGGACCTGAACTTTGTAACAGACACTGCCAAGGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR CCA 90 bp CCTGAGGCAGGACTGGGCTTGGTCAAGGACACTGCAAGACCAGCAATTCGGCTGGAATGCAAAGGGCCCTaGACCCATGAGTACTCATAC +
Preference number: 4 (lower is better)
Translates to: PEAGLGLVKDTARPAIRLECKGP*THEYSY
Trigger: GTATGAGTACTCATGGGTCCAGGGCCCTTTGCATTC...CAGCCGAATTGCTGGTCTTGCAGTGTCCTTGACCAAGCCCAGTCCTGCCTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR CCA 90 bp GGGTTGGGGCCATCAGTCAATACCCACTGTAGGTCCTCCTCTTTCTCTACTACGTGTGGGGTGGGTGGCTaGGGTTGTGGGAAAAACGAG +
Preference number: 4 (lower is better)
Translates to: GLGPSVNTHCRSSSFSTTCGVGG*GCGKNE
Trigger: CTCGTTTTTCCCACAACCCCAGCCACCCACCCCACA...CGTAGTAGAGAAAGAGGAGGACCTACAGTGGGTATTGACTGATGGCCCCAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000467837.5
3UTR CAA 72 bp TGTACACTAGGAGAGAAGCCTGAGGCAGGACTGGGCTaGGTCAAGGACACTGCAAGACCAGCAATTCGGCTG +
Preference number: 4 (lower is better)
Translates to: CTLGEKPEAGLG*VKDTARPAIRL
Trigger: CAGCCGAATTGCTGGTCTTGCAGTGTCCTTGACCAAGCCCAGTCCTGCCTCAGGCTTCTCTCCTAGTGTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000467837.5
CDS-3UTR TCA 90 bp GGTTGGGGCCATCAGTCAATACCCACTGTAGGTCCTCCTCTTTCTCTACTACGTTCTGATGAGTGGCGTTaGGCAGGCGAACACAGGGAG +
Preference number: 4 (lower is better)
Translates to: GWGHQSIPTVGPPLSLLRSDEWR*AGEHRE
Trigger: CTCCCTGTGTTCGCCTGCTCAACGCCACTCATCAGA...ACGTAGTAGAGAAAGAGGAGGACCTACAGTGGGTATTGACTGATGGCCCCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000467837.5
CDS-3UTR TCA 90 bp TACAGAGCACGTCCCAGCACCGTGGCCACATCTGCCAGGGCCTTGGCAGTGTCTACAGACTCATTTTTCTaGGAAACAGGATCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: YRARPSTVATSARALAVSTDSFF*ETGSVC
Trigger: GCACACAGATCCTGTTTCTCAGAAAAATGAGTCTGT...AGACACTGCCAAGGCCCTGGCAGATGTGGCCACGGTGCTGGGACGTGCTCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR TCA 90 bp CTGGCAGCCAATCTGATGAGTGGCGTTGAGCAGGCGAACACAGGGAGCTGTTTTAGGGCCCTGGACCCATaGGTACTCATACAGATCCTT +
Preference number: 4 (lower is better)
Translates to: LAANLMSGVEQANTGSCFRALDP*VLIQIL
Trigger: AAGGATCTGTATGAGTACTCATGGGTCCAGGGCCCT...AAAACAGCTCCCTGTGTTCGCCTGCTCAACGCCACTCATCAGATTGGCTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR TCA 90 bp TCCAGCCGGGTGGCAGCAACCACAACCCTGTCGTCAGGCTTTAATGTCCCAGTTTCAGTAGAGCTCCACTaGCTCAGTTCAAAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SSRVAATTTLSSGFNVPVSVELH*LSSKAG
Trigger: TCCTGCCTTTGAACTGAGTCAGTGGAGCTCTACTGA...AACTGGGACATTAAAGCCTGACGACAGGGTTGTGGTTGCTGCCACCCGGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR GCA 90 bp TACAGAGCACGTCCCAGCACCGTGGCCACATCTGCCAGGGCCTTGGCAGTGTCTAGACCATCCTCGAGCTaGCAATGTAGTCAAAAGTTT +
Preference number: 4 (lower is better)
Translates to: YRARPSTVATSARALAVSRPSSS*QCSQKF
Trigger: AAACTTTTGACTACATTGGCAGCTCGAGGATGGTCT...AGACACTGCCAAGGCCCTGGCAGATGTGGCCACGGTGCTGGGACGTGCTCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR CCA 90 bp ATCTTCCTCTCCACTGAGTTTCCCCTGCACAAACCTTTTAAGCGCCGCACAGCAAGCCTGAGGCAGGACTaGGCTTGGTCAAGGACACTG +
Preference number: 4 (lower is better)
Translates to: IFLSTEFPLHKPFKRRTASLRQD*AWSRTL
Trigger: CAGTGTCCTTGACCAAGCCCAGTCCTGCCTCAGGCT...TGCTGTGCGGCGCTTAAAAGGTTTGTGCAGGGGAAACTCAGTGGAGAGGAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467837.5
CDS-3UTR CCA 90 bp AGCCTGAGGCAGGACTGGGCTTGGTCAAGGACACTGCAAGACCAGCAATTCGGCGTGAAAAGAGCTGCATaGCACATAGTGGGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: SLRQDWAWSRTLQDQQFGVKRAA*HIVGRL
Trigger: CAACCTTCCCACTATGTGCCATGCAGCTCTTTTCAC...GCCGAATTGCTGGTCTTGCAGTGTCCTTGACCAAGCCCAGTCCTGCCTCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR CCA 90 bp ATCCAATCCTGTCTCTTACCCTGTCTCACAGGCCCTGGTTCCGTACAGACTCATGACTATCCAGCCGGGTaGCAGCAACCACAACCCTGT +
Preference number: 4 (lower is better)
Translates to: IQSCLLPCLTGPGSVQTHDYPAG*QQPQPC
Trigger: ACAGGGTTGTGGTTGCTGCCACCCGGCTGGATAGTC...ATGAGTCTGTACGGAACCAGGGCCTGTGAGACAGGGTAAGAGACAGGATTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459963.5
CDS-3UTR CCA 90 bp AGCCTGAGGCAGGACTGGGCTTGGTCAAGGACACTGCAAGACCAGCAATTCGGCAGGAGATCCTCCACCTaGTTCCGTACAGACTCATTT +
Preference number: 4 (lower is better)
Translates to: SLRQDWAWSRTLQDQQFGRRSST*FRTDSF
Trigger: AAATGAGTCTGTACGGAACCAGGTGGAGGATCTCCT...GCCGAATTGCTGGTCTTGCAGTGTCCTTGACCAAGCCCAGTCCTGCCTCAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR CCA 90 bp AGGCAGGACTGGGCTTGGTCAAGGACACTGCAAGACCAGCAATTCGGCTGGTTCTGGTGTTGGTGGGGCTaGAGACAGCGATGTAATGTT +
Preference number: 4 (lower is better)
Translates to: RQDWAWSRTLQDQQFGWFWCWWG*RQRCNV
Trigger: AACATTACATCGCTGTCTCCAGCCCCACCAACACCA...GAACCAGCCGAATTGCTGGTCTTGCAGTGTCCTTGACCAAGCCCAGTCCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR CCA 90 bp CTGATTTGGCCTCCTGAGGATGACAGCAGGGACACCAGCACCACTCTTCTCCAACAACATAAGTGGTGTTaGTGGGGCTGGAGACAGCGA +
Preference number: 4 (lower is better)
Translates to: LIWPPEDDSRDTSTTLLQQHKWC*WGWRQR
Trigger: TCGCTGTCTCCAGCCCCACCAACACCACTTATGTTG...TTGGAGAAGAGTGGTGCTGGTGTCCCTGCTGTCATCCTCAGGAGGCCAAATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR CCA 90 bp CTGGCAGCCAATCTGATGAGTGGCGTTGAGCAGGCGAACACAGGGAGCTGTTTTGACATCTGGACAAAGTaGGAGAGGGTCAGGCTCGAA +
Preference number: 4 (lower is better)
Translates to: LAANLMSGVEQANTGSCFDIWTK*ERVRLE
Trigger: TTCGAGCCTGACCCTCTCCCACTTTGTCCAGATGTC...AAAACAGCTCCCTGTGTTCGCCTGCTCAACGCCACTCATCAGATTGGCTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467837.5
CDS-3UTR CCA 90 bp TCGCTGAAGTTGGTTCCTCCTGCAAGCTCATACAGAGCACGTCCCAGCACCGTGCTGTCTCACAGGCCCTaGTTCCGTACAGACTCATTT +
Preference number: 4 (lower is better)
Translates to: SLKLVPPASSYRARPSTVLSHRP*FRTDSF
Trigger: AAATGAGTCTGTACGGAACCAGGGCCTGTGAGACAG...CACGGTGCTGGGACGTGCTCTGTATGAGCTTGCAGGAGGAACCAACTTCAGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459963.5
CDS-3UTR TCA 90 bp AGGCACCAGAGTGGTCAGCCAGAACAACGCCAGAGATGTTTCGAGCTCGAAGAAGAAAGAAGACAAACATaGCATTGCGGGGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: RHQSGQPEQRQRCFELEEERRQT*HCGAGW
Trigger: CCACCCTGCCCCGCAATGTCATGTTTGTCTTCTTTC...TTCTTCGAGCTCGAAACATCTCTGGCGTTGTTCTGGCTGACCACTCTGGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR TCA 90 bp TTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGCTGGGGGGAGAGGCTGGGACTaGTTTGGCCTCCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: FDPDIKPFMSFPVRKVAGGRGWD*FGLLRM
Trigger: CATCCTCAGGAGGCCAAATCAGTCCCAGCCTCTCCC...CCCAGCCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR TCA 90 bp CTGCACGGGAAACTTGCCCTTCTCCATATCGTAGACCATCCTCGAGCTGCCAATCCTGAACTGTGTCGCTaGAGTTGGTTCCTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: LHGKLALLHIVDHPRAANPELCR*SWFLLQ
Trigger: TTGCAGGAGGAACCAACTTCAGCGACACAGTTCAGG...ATTGGCAGCTCGAGGATGGTCTACGATATGGAGAAGGGCAAGTTTCCCGTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR TCA 90 bp TCCAGCCGGGTGGCAGCAACCACAACCCTGTCGTCAGGCTTTAATGTCCCAGTTCCAATGGAATGTCACTaGGTTCCTGATTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: SSRVAATTTLSSGFNVPVPMECH*VPDSSQ
Trigger: CTGGGAAGAATCAGGAACTCAGTGACATTCCATTGG...AACTGGGACATTAAAGCCTGACGACAGGGTTGTGGTTGCTGCCACCCGGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459963.5
CDS-3UTR GCA 90 bp CCTGAGGCAGGACTGGGCTTGGTCAAGGACACTGCAAGACCAGCAATTCGGCTGAAATCCCTGGTAAAATaGTTGCTCTCCAGCAGAACC +
Preference number: 4 (lower is better)
Translates to: PEAGLGLVKDTARPAIRLKSLVK*LLSSRT
Trigger: GGTTCTGCTGGAGAGCAAGCATTTTACCAGGGATTT...CAGCCGAATTGCTGGTCTTGCAGTGTCCTTGACCAAGCCCAGTCCTGCCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000467837.5
CDS-3UTR GCA 90 bp AGGTCCTGCCTGAGGATAGACTGGAACCATGAGTTGTTGGCTTTAATCAGGAACTGCTTTGGATGGAGCTaGGCCGCATGCAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RSCLRIDWNHELLALIRNCFGWS*AACRWQ
Trigger: CTGCCACCTGCATGCGGCGCAGCTCCATCCAAAGCA...GTTCCTGATTAAAGCCAACAACTCATGGTTCCAGTCTATCCTCAGGCAGGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR GCA 90 bp CTGATTTGGCCTCCTGAGGATGACAGCAGGGACACCAGCACCACTCTTCTCCAAACATCAGGTGCCTTTTaGAAAGCTTCAGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: LIWPPEDDSRDTSTTLLQTSGAF*KASAAA
Trigger: GGCTGCTGCTGAAGCTTTGCAAAAGGCACCTGATGT...TTGGAGAAGAGTGGTGCTGGTGTCCCTGCTGTCATCCTCAGGAGGCCAAATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR GCA 90 bp TGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGGGCTCAGCCCAGAGATaGCCCTGTCCTCAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: CSLTLTLNLLCPSQSGRWGSAQR*PCPQGL
Trigger: GAGCCCCTGAGGACAGGGGCATCTCTGGGCTGAGCC...CCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CCA 90 bp AGGCAGGACTGGGCTTGGTCAAGGACACTGCAAGACCAGCAATTCGGCTGGTTCGCAGTGAGCAAACTCTaGCCCATAGGAATTGGAGTA +
Preference number: 4 (lower is better)
Translates to: RQDWAWSRTLQDQQFGWFAVSKL*PIGIGV
Trigger: TACTCCAATTCCTATGGGCCAGAGTTTGCTCACTGC...GAACCAGCCGAATTGCTGGTCTTGCAGTGTCCTTGACCAAGCCCAGTCCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000467837.5
CDS-3UTR CCA 90 bp CAGTGTCTGTTACAAAGTTCAGGTCCTCTTCAGGGCTCAGCCATTCGGGATAGCTCAGCAGCAGCCAGCTaGGTGACAAAGGAAGCCACT +
Preference number: 4 (lower is better)
Translates to: QCLLQSSGPLQGSAIRDSSAAAS*VTKEAT
Trigger: AGTGGCTTCCTTTGTCACCCAGCTGGCTGCTGCTGA...GCTATCCCGAATGGCTGAGCCCTGAAGAGGACCTGAACTTTGTAACAGACACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR CCA 90 bp CACCAGAGTGGTCAGCCAGAACAACGCCAGAGATGTTTCGAGCTCGAAGAAATCTCAGCAGCAGCCAGCTaGGTGACAAAGGAAGCCACT +
Preference number: 4 (lower is better)
Translates to: HQSGQPEQRQRCFELEEISAAAS*VTKEAT
Trigger: AGTGGCTTCCTTTGTCACCCAGCTGGCTGCTGCTGA...GATTTCTTCGAGCTCGAAACATCTCTGGCGTTGTTCTGGCTGACCACTCTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR TCA 90 bp GTGAGCAAACTCTGGCCCATAGGAATTGGAGTAAACACCAAACCCATCATTTGGGGGAGAGGCTGGGACTaGTTTGGCCTCCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: VSKLWPIGIGVNTKPIIWGRGWD*FGLLRM
Trigger: CATCCTCAGGAGGCCAAATCAGTCCCAGCCTCTCCC...CCAAATGATGGGTTTGGTGTTTACTCCAATTCCTATGGGCCAGAGTTTGCTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR TCA 90 bp GGTTGGGGCCATCAGTCAATACCCACTGTAGGTCCTCCTCTTTCTCTACTACGTCCTGAACTGTGTCGCTaGAGTTGGTTCCTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: GWGHQSIPTVGPPLSLLRPELCR*SWFLLQ
Trigger: TTGCAGGAGGAACCAACTTCAGCGACACAGTTCAGG...ACGTAGTAGAGAAAGAGGAGGACCTACAGTGGGTATTGACTGATGGCCCCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR TCA 90 bp AGGCACCAGAGTGGTCAGCCAGAACAACGCCAGAGATGTTTCGAGCTCGAAGAAAGATGCTCTAGGAAGTaGACTGCTGAGCTGGCAAGA +
Preference number: 4 (lower is better)
Translates to: RHQSGQPEQRQRCFELEERCSRK*TAELAR
Trigger: TCTTGCCAGCTCAGCAGTTCACTTCCTAGAGCATCT...TTCTTCGAGCTCGAAACATCTCTGGCGTTGTTCTGGCTGACCACTCTGGTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR GCA 90 bp CTGGCAGCCAATCTGATGAGTGGCGTTGAGCAGGCGAACACAGGGAGCTGTTTTTCCACTGTATTTCTCTaGAGTGAGCAAACTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LAANLMSGVEQANTGSCFSTVFL*SEQTLA
Trigger: GGCCAGAGTTTGCTCACTGCAGAGAAATACAGTGGA...AAAACAGCTCCCTGTGTTCGCCTGCTCAACGCCACTCATCAGATTGGCTGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000467837.5
CDS-3UTR GCA 90 bp TCCAGCCGGGTGGCAGCAACCACAACCCTGTCGTCAGGCTTTAATGTCCCAGTTCATAAGCCAAACCATTaGCCAGCGAATTCCACTGTA +
Preference number: 4 (lower is better)
Translates to: SSRVAATTTLSSGFNVPVHKPNH*PANSTV
Trigger: TACAGTGGAATTCGCTGGGCAATGGTTTGGCTTATG...AACTGGGACATTAAAGCCTGACGACAGGGTTGTGGTTGCTGCCACCCGGCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR GCA 90 bp AACGACTATCCAGCCGGGTGGCAGCAACCACAACCCTGTCGTCAGGCTTTAATGACTGCACGGGAAACTTaGCCTTCTCCATATCGTAGA +
Preference number: 4 (lower is better)
Translates to: NDYPAGWQQPQPCRQALMTARET*PSPYRR
Trigger: TCTACGATATGGAGAAGGGCAAGTTTCCCGTGCAGT...CATTAAAGCCTGACGACAGGGTTGTGGTTGCTGCCACCCGGCTGGATAGTCGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR GCA 90 bp CCCTTGAAAGAAGACAAACATGACATTGCGGGGCAGGGTGGTCACATCAGGTGCTCCGTCTCATTAGAATaGAAAGGGCCCTGGACCCAT +
Preference number: 4 (lower is better)
Translates to: PLKEDKHDIAGQGGHIRCSVSLE*KGPWTH
Trigger: ATGGGTCCAGGGCCCTTTGCATTCTAATGAGACGGA...GCACCTGATGTGACCACCCTGCCCCGCAATGTCATGTTTGTCTTCTTTCAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR GCA 90 bp TTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGCTGGGACGCCCACCCTAATGTaGCATCTGAGGGCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: FDPDIKPFMSFPVRKVAGTPTLM*HLRAWR
Trigger: TCTCCAGGCCCTCAGATGGCACATTAGGGTGGGCGT...CCCAGCCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CCA 90 bp GGCAGGACTGGGCTTGGTCAAGGACACTGCAAGACCAGCAATTCGGCTGGTTCTTCTTTCTCTACTACGTaGATAACCCCTGTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: GRTGLGQGHCKTSNSAGSSFSTT*ITPVSP
Trigger: TGGAGACACAGGGGTTATCCACGTAGTAGAGAAAGA...AGAACCAGCCGAATTGCTGGTCTTGCAGTGTCCTTGACCAAGCCCAGTCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000467837.5
CDS-3UTR CCA 90 bp CCCTTGAAAGAAGACAAACATGACATTGCGGGGCAGGGTGGTCACATCAGGTGCCATCTGCCAGGGCCTTaGCAGTGTCTGTTACAAAGT +
Preference number: 4 (lower is better)
Translates to: PLKEDKHDIAGQGGHIRCHLPGP*QCLLQS
Trigger: ACTTTGTAACAGACACTGCCAAGGCCCTGGCAGATG...GCACCTGATGTGACCACCCTGCCCCGCAATGTCATGTTTGTCTTCTTTCAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR CCA 90 bp CAGTGTCTGTTACAAAGTTCAGGTCCTCTTCAGGGCTCAGCCATTCGGGATAGCCATAAGTGGTGTTGGTaGGGCTGGAGACAGCGATGT +
Preference number: 4 (lower is better)
Translates to: QCLLQSSGPLQGSAIRDSHKWCW*GWRQRC
Trigger: ACATCGCTGTCTCCAGCCCCACCAACACCACTTATG...GCTATCCCGAATGGCTGAGCCCTGAAGAGGACCTGAACTTTGTAACAGACACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR CCA 90 bp CCACATCTGCCAGGGCCTTGGCAGTGTCTGTTACAAAGTTCAGGTCCTCTTCAGACTTGGGACTTTACTTaGATCCTGGCACTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: PHLPGPWQCLLQSSGPLQTWDFT*ILALLS
Trigger: CGAGAGCAGTGCCAGGATCCAAGTAAAGTCCCAAGT...CTGAAGAGGACCTGAACTTTGTAACAGACACTGCCAAGGCCCTGGCAGATGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR TCA 90 bp AGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGCTGTCTGATGAGTGGCGTTaGGCAGGCGAACACAGGGAG +
Preference number: 4 (lower is better)
Translates to: SLTLTLNLLCPSQSGRWLSDEWR*AGEHRE
Trigger: CTCCCTGTGTTCGCCTGCTCAACGCCACTCATCAGA...CAGCCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR TCA 90 bp GTGAGCAAACTCTGGCCCATAGGAATTGGAGTAAACACCAAACCCATCATTTGGACTAGGAGAGAAGCCTaGGGCAGGACTGGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: VSKLWPIGIGVNTKPIIWTRREA*GRTGLG
Trigger: ACCAAGCCCAGTCCTGCCTCAGGCTTCTCTCCTAGT...CCAAATGATGGGTTTGGTGTTTACTCCAATTCCTATGGGCCAGAGTTTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000467837.5
CDS-3UTR TCA 90 bp CTGTGTGCATCCAAAGCTCTAATGAAGTTCTTAAGGCCACCTGTCCCAGCTCCATGGGAAGGTTGGTGCTaGGCCATTCTGACTCAGGTT +
Preference number: 4 (lower is better)
Translates to: LCASKALMKFLRPPVPAPWEGWC*AILTQV
Trigger: AACCTGAGTCAGAATGGCTCAGCACCAACCTTCCCA...TGGAGCTGGGACAGGTGGCCTTAAGAACTTCATTAGAGCTTTGGATGCACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR TCA 90 bp TTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGCTGGGGCTCCCGGGGAGCAATaGAAAGGACATCAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: FDPDIKPFMSFPVRKVAGAPGEQ*KGHQLW
Trigger: CCAAAGCTGATGTCCTTTTCATTGCTCCCCGGGAGC...CCCAGCCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR GCA 90 bp ACACTAGGAGAGAAGCCTGAGGCAGGACTGGGCTTGGTCAAGGACACTGCAAGACATAAGCCAAACCATTaGCCAGCGAATTCCACTGTA +
Preference number: 4 (lower is better)
Translates to: TLGEKPEAGLGLVKDTARHKPNH*PANSTV
Trigger: TACAGTGGAATTCGCTGGGCAATGGTTTGGCTTATG...TCTTGCAGTGTCCTTGACCAAGCCCAGTCCTGCCTCAGGCTTCTCTCCTAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000467837.5
CDS-3UTR GCA 90 bp CCACATCTGCCAGGGCCTTGGCAGTGTCTGTTACAAAGTTCAGGTCCTCTTCAGGTGCTGATGACAGCATaGATGTGTGAAAAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PHLPGPWQCLLQSSGPLQVLMTA*MCEKSC
Trigger: GCAGCTCTTTTCACACATGCATGCTGTCATCAGCAC...CTGAAGAGGACCTGAACTTTGTAACAGACACTGCCAAGGCCCTGGCAGATGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR GCA 90 bp TCAGGGGCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTGCTTTGGATGGAGCTaGGCCGCATGCAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SGAQCSLTLTLNLLCPSQCFGWS*AACRWQ
Trigger: CTGCCACCTGCATGCGGCGCAGCTCCATCCAAAGCA...CTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGCCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR GCA 90 bp TGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGGACAAAGGAAGCCACTaGGCTTTCAGCCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: CSLTLTLNLLCPSQSGRWDKGSH*AFSPWG
Trigger: GCCCCAGGGGCTGAAAGCGCAGTGGCTTCCTTTGTC...CCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR GCA 90 bp CCAGCACCACTCTTCTCCAATGTGGCCAGGAGATCCTCCACCTGGTTCCGTACAAGACCATCCTCGAGCTaGCAATGTAGTCAAAAGTTT +
Preference number: 4 (lower is better)
Translates to: PAPLFSNVARRSSTWFRTRPSSS*QCSQKF
Trigger: AAACTTTTGACTACATTGGCAGCTCGAGGATGGTCT...TGTACGGAACCAGGTGGAGGATCTCCTGGCCACATTGGAGAAGAGTGGTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR GCA 90 bp CACCAGAGTGGTCAGCCAGAACAACGCCAGAGATGTTTCGAGCTCGAAGAAATCGAAGTTGGTTCCTCCTaGAAGCTCATACAGAGCACG +
Preference number: 4 (lower is better)
Translates to: HQSGQPEQRQRCFELEEIEVGSS*KLIQST
Trigger: CGTGCTCTGTATGAGCTTGCAGGAGGAACCAACTTC...GATTTCTTCGAGCTCGAAACATCTCTGGCGTTGTTCTGGCTGACCACTCTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR CCA 90 bp ACACTAGGAGAGAAGCCTGAGGCAGGACTGGGCTTGGTCAAGGACACTGCAAGATCTTTCTCTACTACGTaGATAACCCCTGTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: TLGEKPEAGLGLVKDTARSFSTT*ITPVSP
Trigger: TGGAGACACAGGGGTTATCCACGTAGTAGAGAAAGA...TCTTGCAGTGTCCTTGACCAAGCCCAGTCCTGCCTCAGGCTTCTCTCCTAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000467837.5
CDS-3UTR CCA 90 bp TGTCCCAGCTCCACAAATGAGTCAACATTCTCTAACTGCACGGGAAACTTGCCCTGCGCTTTCAGCCCCTaGGGCCACATTCCAGAAAAA +
Preference number: 4 (lower is better)
Translates to: CPSSTNESTFSNCTGNLPCAFSP*GHIPEK
Trigger: TTTTTCTGGAATGTGGCCCCAGGGGCTGAAAGCGCA...GGGCAAGTTTCCCGTGCAGTTAGAGAATGTTGACTCATTTGTGGAGCTGGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR CCA 90 bp AGGCACCAGAGTGGTCAGCCAGAACAACGCCAGAGATGTTTCGAGCTCGAAGAAGTGGTGTTCATCCTTTaGCCAACACCCAATCCAATC +
Preference number: 4 (lower is better)
Translates to: RHQSGQPEQRQRCFELEEVVFIL*PTPNPI
Trigger: GATTGGATTGGGTGTTGGCCAAAGGATGAACACCAC...TTCTTCGAGCTCGAAACATCTCTGGCGTTGTTCTGGCTGACCACTCTGGTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459963.5
CDS-3UTR CCA 90 bp ATCCTTTGGCCAACACCCAATCCAATCCTGTCTCTTACCCTGTCTCACAGGCCCCAGCAACAACAGCTGTaGTGTTCATCCTTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: ILWPTPNPILSLTLSHRPQQQQL*CSSFGQ
Trigger: TTGGCCAAAGGATGAACACCACAGCTGTTGTTGCTG...GGGCCTGTGAGACAGGGTAAGAGACAGGATTGGATTGGGTGTTGGCCAAAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459963.5
3UTR CAA 72 bp ACTTTACTTGGATCCTGGCACTGCTCTCGGGTGAGGTaGACCACTGTGCCAGTCAAATTTGCCAAGGCATAC +
Preference number: 4 (lower is better)
Translates to: TLLGSWHCSRVR*TTVPVKFAKAY
Trigger: GTATGCCTTGGCAAATTTGACTGGCACAGTGGTCAACCTCACCCGAGAGCAGTGCCAGGATCCAAGTAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR CAA 72 bp CTTCCCAGCAGCAACAACAGCTGTGGTGTTCATCCTTaGGCCAACACCCAATCCAATCCTGTCTCTTACCCT +
Preference number: 4 (lower is better)
Translates to: LPSSNNSCGVHP*ANTQSNPVSYP
Trigger: AGGGTAAGAGACAGGATTGGATTGGGTGTTGGCCAAAGGATGAACACCACAGCTGTTGTTGCTGCTGGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459963.5
CDS-3UTR TCA 90 bp CACTGTAGGTCCTCCTCTTTCTCTACTACGTGGATAACCCCTGTGTCTCCACTATATCTTCCTCTCCACTaGGTTTCCCCTGCACAAACC +
Preference number: 4 (lower is better)
Translates to: HCRSSSFSTTWITPVSPLYLPLH*VSPAQT
Trigger: GGTTTGTGCAGGGGAAACTCAGTGGAGAGGAAGATA...TAGTGGAGACACAGGGGTTATCCACGTAGTAGAGAAAGAGGAGGACCTACAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467837.5
CDS-3UTR TCA 90 bp TCAGGGGCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGACTAGGAGAGAAGCCTaGGGCAGGACTGGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: SGAQCSLTLTLNLLCPSQTRREA*GRTGLG
Trigger: ACCAAGCCCAGTCCTGCCTCAGGCTTCTCTCCTAGT...CTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGCCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR TCA 90 bp TTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGCTGGGTGGGAAGGTTGGTGCTaGGCCATTCTGACTCAGGTT +
Preference number: 4 (lower is better)
Translates to: FDPDIKPFMSFPVRKVAGWEGWC*AILTQV
Trigger: AACCTGAGTCAGAATGGCTCAGCACCAACCTTCCCA...CCCAGCCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR TCA 90 bp CCACACATTGTAATCAGACAGGGGGTCACAGACGATTTCTGGGTTGATGCTGAAGTTTGGGGATCAGCCTaGACTGTGTCGCTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: PHIVIRQGVTDDFWVDAEVWGSA*TVSLKL
Trigger: CAACTTCAGCGACACAGTTCAGGCTGATCCCCAAAC...TTCAGCATCAACCCAGAAATCGTCTGTGACCCCCTGTCTGATTACAATGTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR TCA 90 bp TTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGCTGGGAGCCCACTGTCAGGGTaGTCAACTCAAGCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: FDPDIKPFMSFPVRKVAGSPLSG*STQALC
Trigger: GCAAAGAGCTTGAGTTGATCACCCTGACAGTGGGCT...CCCAGCCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR TCA 90 bp CACTGTAGGTCCTCCTCTTTCTCTACTACGTGGATAACCCCTGTGTCTCCACTACCAGGGAGGTTCCAGTaGCAAATTAGTGGTTGTGTC +
Preference number: 4 (lower is better)
Translates to: HCRSSSFSTTWITPVSPLPGRFQ*QISGCV
Trigger: GACACAACCACTAATTTGTCACTGGAACCTCCCTGG...TAGTGGAGACACAGGGGTTATCCACGTAGTAGAGAAAGAGGAGGACCTACAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR TCA 90 bp TTGGGGCCATCAGTCAATACCCACTGTAGGTCCTCCTCTTTCTCTACTACGTGGTATCTTCCTCTCCACTaGGTTTCCCCTGCACAAACT +
Preference number: 4 (lower is better)
Translates to: LGPSVNTHCRSSSFSTTWYLPLH*VSPAQT
Trigger: AGTTTGTGCAGGGGAAACTCAGTGGAGAGGAAGATA...CCACGTAGTAGAGAAAGAGGAGGACCTACAGTGGGTATTGACTGATGGCCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR GCA 90 bp CTCTTCAGGGCTCAGCCATTCGGGATAGCTCACATTAATGTTCTCAGCAGTGTCGGTGGTCACATCAGGTaGCTTTTGCAAAGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LFRAQPFGIAHINVLSSVGGHIR*LLQSFS
Trigger: GCTGAAGCTTTGCAAAAGGCACCTGATGTGACCACC...GACACTGCTGAGAACATTAATGTGAGCTATCCCGAATGGCTGAGCCCTGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR GCA 90 bp GTGGTGTTCATCCTTTGGCCAACACCCAATCCAATCCTGTCTCTTACCCTGTCTGGTGGTCACATCAGGTaGCTTTTGCAAAGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: VVFILWPTPNPILSLTLSGGHIR*LLQSFS
Trigger: GCTGAAGCTTTGCAAAAGGCACCTGATGTGACCACC...AGACAGGGTAAGAGACAGGATTGGATTGGGTGTTGGCCAAAGGATGAACACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459963.5
CDS-3UTR CCA 90 bp TGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGAGCCTGAGGCAGGACTaGGCTTGGTCAAGGACACTG +
Preference number: 4 (lower is better)
Translates to: CSLTLTLNLLCPSQSGRWSLRQD*AWSRTL
Trigger: CAGTGTCCTTGACCAAGCCCAGTCCTGCCTCAGGCT...CCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CCA 90 bp AGCACCACTCTTCTCCAATGTGGCCAGGAGATCCTCCACCTATCCTTAATGGGCCTGGCCCATAGGAATTaGAGTAAACACCAAACCCAT +
Preference number: 4 (lower is better)
Translates to: STTLLQCGQEILHLSLMGLAHRN*SKHQTH
Trigger: ATGGGTTTGGTGTTTACTCCAATTCCTATGGGCCAG...GCCCATTAAGGATAGGTGGAGGATCTCCTGGCCACATTGGAGAAGAGTGGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459963.5
CDS-3UTR CCA 90 bp TCTTTCTCTACTACGTGGATAACCCCTGTGTCTCCACTAATTGAAGACTGGCAGATGCTGAAGGTGCTTTaGATGGAGCTGCGCCGCATG +
Preference number: 4 (lower is better)
Translates to: SFSTTWITPVSPLIEDWQMLKVL*MELRRM
Trigger: CATGCGGCGCAGCTCCATCCAAAGCACCTTCAGCAT...CTGCCAGTCTTCAATTAGTGGAGACACAGGGGTTATCCACGTAGTAGAGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR CCA 90 bp GCACCAGAGTGGTCAGCCAGAACAACGCCAGAGATGTTTCGAGCTCGAAGAAATGTCACAGACGATTTCTaGGTTGATGCTGAAGGTGCT +
Preference number: 4 (lower is better)
Translates to: APEWSARTTPEMFRARRNVTDDF*VDAEGA
Trigger: AGCACCTTCAGCATCAACCCAGAAATCGTCTGTGAC...ATTTCTTCGAGCTCGAAACATCTCTGGCGTTGTTCTGGCTGACCACTCTGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR CCA 90 bp TGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGGACTATCCAGCCGGGTaGCAGCAACCACAACCCTGT +
Preference number: 4 (lower is better)
Translates to: CSLTLTLNLLCPSQSGRWDYPAG*QQPQPC
Trigger: ACAGGGTTGTGGTTGCTGCCACCCGGCTGGATAGTC...CCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CCA 90 bp AGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGCTGTGGAAGGCACCAGAGTaGTCAGCCAGAACAACGCCA +
Preference number: 4 (lower is better)
Translates to: SLTLTLNLLCPSQSGRWLWKAPE*SARTTP
Trigger: TGGCGTTGTTCTGGCTGACCACTCTGGTGCCTTCCA...CAGCCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CCA 90 bp TTCAGGGCTCAGCCATTCGGGATAGCTCACATTAATGTTCTCAGCAGTGTCGTAGCTGGCAAGAAAAGCTaGGGTCCTCCTCAGTATGAC +
Preference number: 4 (lower is better)
Translates to: FRAQPFGIAHINVLSSVVAGKKS*GPPQYD
Trigger: GTCATACTGAGGAGGACCCCAGCTTTTCTTGCCAGC...TACGACACTGCTGAGAACATTAATGTGAGCTATCCCGAATGGCTGAGCCCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR CCA 90 bp CAGGTCCTCTTCAGGGCTCAGCCATTCGGGATAGCTCACATTAATGTTCTCAGCGATACATGTTCTACATaGCACCCAGCTATGTGCCTC +
Preference number: 4 (lower is better)
Translates to: QVLFRAQPFGIAHINVLSDTCST*HPAMCL
Trigger: GAGGCACATAGCTGGGTGCCATGTAGAACATGTATC...GCTGAGAACATTAATGTGAGCTATCCCGAATGGCTGAGCCCTGAAGAGGACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
3UTR CAA 72 bp GGACCCATGAGTACTCATACAGATCCTTGTTTTCACTaGGGACTTTACTTGGATCCTGGCACTGCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: GPMSTHTDPCFH*GLYLDPGTALG
Trigger: CCCGAGAGCAGTGCCAGGATCCAAGTAAAGTCCCAAGTGAAAACAAGGATCTGTATGAGTACTCATGGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR TCA 90 bp TTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGCTGGGTATCTTCCTCTCCACTaGGTTTCCCCTGCACAAACC +
Preference number: 4 (lower is better)
Translates to: FDPDIKPFMSFPVRKVAGYLPLH*VSPAQT
Trigger: GGTTTGTGCAGGGGAAACTCAGTGGAGAGGAAGATA...CCCAGCCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294785.10
CDS-3UTR TCA 90 bp GCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGATCTGATGAGTGGCGTTaGGCAGGCGAACACAGGGAG +
Preference number: 4 (lower is better)
Translates to: AQCSLTLTLNLLCPSQSGSDEWR*AGEHRE
Trigger: CTCCCTGTGTTCGCCTGCTCAACGCCACTCATCAGA...TCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR TCA 90 bp AGGTCCTCCTCTTTCTCTACTACGTGGATAACCCCTGTGTCTCCACTAATTGAAGAAAGAAGACAAACATaGCATTGCGGGGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: RSSSFSTTWITPVSPLIEERRQT*HCGAGW
Trigger: CCACCCTGCCCCGCAATGTCATGTTTGTCTTCTTTC...TTCAATTAGTGGAGACACAGGGGTTATCCACGTAGTAGAGAAAGAGGAGGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR TCA 90 bp TCAGGGGCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGGCTCTTTGCTGGCGATaGGAAATATCCGGGCACGGA +
Preference number: 4 (lower is better)
Translates to: SGAQCSLTLTLNLLCPSQALCWR*EISGHG
Trigger: TCCGTGCCCGGATATTTCTCATCGCCAGCAAAGAGC...CTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGCCCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR TCA 90 bp TTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGCTGGGCCAGGGAGGTTCCAGTaGCAAATTAGTGGTTGTGTC +
Preference number: 4 (lower is better)
Translates to: FDPDIKPFMSFPVRKVAGPGRFQ*QISGCV
Trigger: GACACAACCACTAATTTGTCACTGGAACCTCCCTGG...CCCAGCCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR GCA 90 bp GGTTGGGGCCATCAGTCAATACCCACTGTAGGTCCTCCTCTTTCTCTACTACGTAAATCCCTGGTAAAATaGTTGCTCTCCAGCAGAACC +
Preference number: 4 (lower is better)
Translates to: GWGHQSIPTVGPPLSLLRKSLVK*LLSSRT
Trigger: GGTTCTGCTGGAGAGCAAGCATTTTACCAGGGATTT...ACGTAGTAGAGAAAGAGGAGGACCTACAGTGGGTATTGACTGATGGCCCCAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000467837.5
CDS-3UTR GCA 90 bp TGTCCCAGCTCCACAAATGAGTCAACATTCTCTAACTGCACGGGAAACTTGCCCTCCACTGTATTTCTCTaGAGTGAGCAAACTCTGGCC +
Preference number: 4 (lower is better)
Translates to: CPSSTNESTFSNCTGNLPSTVFL*SEQTLA
Trigger: GGCCAGAGTTTGCTCACTGCAGAGAAATACAGTGGA...GGGCAAGTTTCCCGTGCAGTTAGAGAATGTTGACTCATTTGTGGAGCTGGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR GCA 90 bp CTCTTCAGGGCTCAGCCATTCGGGATAGCTCACATTAATGTTCTCAGCAGTGTCACTGCACGGGAAACTTaGCCTTCTCCATATCGTAGA +
Preference number: 4 (lower is better)
Translates to: LFRAQPFGIAHINVLSSVTARET*PSPYRR
Trigger: TCTACGATATGGAGAAGGGCAAGTTTCCCGTGCAGT...GACACTGCTGAGAACATTAATGTGAGCTATCCCGAATGGCTGAGCCCTGAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR GCA 90 bp AGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGCTGGCTCGAAGAAATCGCTaGAGGGAAGATGGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: SLTLTLNLLCPSQSGRWLARRNR*REDGGR
Trigger: TCTCCCACCATCTTCCCTGCAGCGATTTCTTCGAGC...CAGCCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR GCA 90 bp GCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGACTTGGATCCTGGCACTaGTCTCGGGTGAGGTTGACC +
Preference number: 4 (lower is better)
Translates to: AQCSLTLTLNLLCPSQSGLGSWH*SRVRLT
Trigger: GGTCAACCTCACCCGAGAGCAGTGCCAGGATCCAAG...TCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR GCA 90 bp ACAACCCTGTCGTCAGGCTTTAATGTCCCAGTTGTATTTATAGGCTTTAGCATGCTTGGATCCTGGCACTaGTCTCGGGTGAGGTTGACC +
Preference number: 4 (lower is better)
Translates to: TTLSSGFNVPVVFIGFSMLGSWH*SRVRLT
Trigger: GGTCAACCTCACCCGAGAGCAGTGCCAGGATCCAAG...CATGCTAAAGCCTATAAATACAACTGGGACATTAAAGCCTGACGACAGGGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR CCA 90 bp AGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGCTGTGCGCTTTCAGCCCCTaGGGCCACATTCCAGAAAAA +
Preference number: 4 (lower is better)
Translates to: SLTLTLNLLCPSQSGRWLCAFSP*GHIPEK
Trigger: TTTTTCTGGAATGTGGCCCCAGGGGCTGAAAGCGCA...CAGCCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CCA 90 bp TGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGTCAGCAGCAGCCAGCTaGGTGACAAAGGAAGCCACT +
Preference number: 4 (lower is better)
Translates to: CSLTLTLNLLCPSQSGRWSAAAS*VTKEAT
Trigger: AGTGGCTTCCTTTGTCACCCAGCTGGCTGCTGCTGA...CCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CCA 90 bp TTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGCTGGGTGGTGTTGGTGGGGCTaGAGACAGCGATGTAATGTT +
Preference number: 4 (lower is better)
Translates to: FDPDIKPFMSFPVRKVAGWCWWG*RQRCNV
Trigger: AACATTACATCGCTGTCTCCAGCCCCACCAACACCA...CCCAGCCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CCA 90 bp AGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGCTGCAACATAAGTGGTGTTaGTGGGGCTGGAGACAGCGA +
Preference number: 4 (lower is better)
Translates to: SLTLTLNLLCPSQSGRWLQHKWC*WGWRQR
Trigger: TCGCTGTCTCCAGCCCCACCAACACCACTTATGTTG...CAGCCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CCA 90 bp AGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGCTGACTTTACTTGGATCCTaGCACTGCTCTCGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SLTLTLNLLCPSQSGRWLTLLGS*HCSRVR
Trigger: CCTCACCCGAGAGCAGTGCCAGGATCCAAGTAAAGT...CAGCCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CCA 90 bp TTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGCTGGGACTTGGGACTTTACTTaGATCCTGGCACTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: FDPDIKPFMSFPVRKVAGTWDFT*ILALLS
Trigger: CGAGAGCAGTGCCAGGATCCAAGTAAAGTCCCAAGT...CCCAGCCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR TCA 90 bp AGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGCTGGACAGCATGCATGTGTaGAAAGAGCTGCATGGCACA +
Preference number: 4 (lower is better)
Translates to: SLTLTLNLLCPSQSGRWLDSMHV*KELHGT
Trigger: TGTGCCATGCAGCTCTTTTCACACATGCATGCTGTC...CAGCCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR TCA 90 bp TCAGGGGCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGGAAAGAAGACAAACATaGCATTGCGGGGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: SGAQCSLTLTLNLLCPSQERRQT*HCGAGW
Trigger: CCACCCTGCCCCGCAATGTCATGTTTGTCTTCTTTC...CTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGCCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR TCA 90 bp CAGTGTCTGTTACAAAGTTCAGGTCCTCTTCAGGGCTCAGCCATTCGGGATAGCACAGACTCATTTTTCTaGGAAACAGGATCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: QCLLQSSGPLQGSAIRDSTDSFF*ETGSVC
Trigger: GCACACAGATCCTGTTTCTCAGAAAAATGAGTCTGT...GCTATCCCGAATGGCTGAGCCCTGAAGAGGACCTGAACTTTGTAACAGACACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR TCA 90 bp TCAGGGGCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGCCTGAACTGTGTCGCTaGAGTTGGTTCCTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: SGAQCSLTLTLNLLCPSQPELCR*SWFLLQ
Trigger: TTGCAGGAGGAACCAACTTCAGCGACACAGTTCAGG...CTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGCCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR TCA 90 bp GGTTGGGGCCATCAGTCAATACCCACTGTAGGTCCTCCTCTTTCTCTACTACGTGATAGACTGGAACCATaGGTTGTTGGCTTTAATCAG +
Preference number: 4 (lower is better)
Translates to: GWGHQSIPTVGPPLSLLRDRLEP*VVGFNQ
Trigger: CTGATTAAAGCCAACAACTCATGGTTCCAGTCTATC...ACGTAGTAGAGAAAGAGGAGGACCTACAGTGGGTATTGACTGATGGCCCCAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR TCA 90 bp TGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGAGGGCCCTGGACCCATaGGTACTCATACAGATCCTT +
Preference number: 4 (lower is better)
Translates to: CSLTLTLNLLCPSQSGRWRALDP*VLIQIL
Trigger: AAGGATCTGTATGAGTACTCATGGGTCCAGGGCCCT...CCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR GCA 90 bp AGGTCCTCCTCTTTCTCTACTACGTGGATAACCCCTGTGTCTCCACTAATTGAAGAAGTTGGTTCCTCCTaGAAGCTCATACAGAGCACG +
Preference number: 4 (lower is better)
Translates to: RSSSFSTTWITPVSPLIEEVGSS*KLIQST
Trigger: CGTGCTCTGTATGAGCTTGCAGGAGGAACCAACTTC...TTCAATTAGTGGAGACACAGGGGTTATCCACGTAGTAGAGAAAGAGGAGGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR GCA 90 bp GGGATATATATCTTCCTCTCCACTGAGTTTCCCCTGCACAAACCTTTTAAGCGCCCACTGAGTTTCCCCTaGACAAACCTTTTAAGCGCC +
Preference number: 4 (lower is better)
Translates to: GIYIFLSTEFPLHKPFKRPLSFP*TNLLSA
Trigger: GGCGCTTAAAAGGTTTGTGCAGGGGAAACTCAGTGG...GCGCTTAAAAGGTTTGTGCAGGGGAAACTCAGTGGAGAGGAAGATATATATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000467837.5
CDS-3UTR CCA 90 bp GGCATACTGTACAACATAAGTGGTGTTGGTGGGGCTGGAGACAGCGATGTAATGCTGGCCCATAGGAATTaGAGTAAACACCAAACCCAT +
Preference number: 4 (lower is better)
Translates to: GILYNISGVGGAGDSDVMLAHRN*SKHQTH
Trigger: ATGGGTTTGGTGTTTACTCCAATTCCTATGGGCCAG...CATTACATCGCTGTCTCCAGCCCCACCAACACCACTTATGTTGTACAGTATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR CCA 90 bp GCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAATGCTGAAGGTGCTTTaGATGGAGCTGCGCCGCATG +
Preference number: 4 (lower is better)
Translates to: AQCSLTLTLNLLCPSQSGMLKVL*MELRRM
Trigger: CATGCGGCGCAGCTCCATCCAAAGCACCTTCAGCAT...TCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CCA 90 bp TGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGCACTCTTCTCCAATGTaGCCAGGAGATCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: CSLTLTLNLLCPSQSGRWHSSPM*PGDPPP
Trigger: AGGTGGAGGATCTCCTGGCCACATTGGAGAAGAGTG...CCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CCA 90 bp GCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGCTGGGACTGATTTaGCCTCCTGAGGATGACAGC +
Preference number: 4 (lower is better)
Translates to: AQCSLTLTLNLLCPSQSGRLGLI*PPEDDS
Trigger: GCTGTCATCCTCAGGAGGCCAAATCAGTCCCAGCCT...TCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CCA 90 bp AAAGATGGGGAAACTAAAGTCTTCATAAGCCAAACCATTGCCCAGCGAATTCCAAGGCTGGGACTGATTTaGCCTCCTGAGGATGACAGC +
Preference number: 4 (lower is better)
Translates to: KDGETKVFISQTIAQRIPRLGLI*PPEDDS
Trigger: GCTGTCATCCTCAGGAGGCCAAATCAGTCCCAGCCT...TGGAATTCGCTGGGCAATGGTTTGGCTTATGAAGACTTTAGTTTCCCCATCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR CCA 90 bp ACAACCCTGTCGTCAGGCTTTAATGTCCCAGTTGTATTTATAGGCTTTAGCATGTGGAAGGCACCAGAGTaGTCAGCCAGAACAACGCCA +
Preference number: 4 (lower is better)
Translates to: TTLSSGFNVPVVFIGFSMWKAPE*SARTTP
Trigger: TGGCGTTGTTCTGGCTGACCACTCTGGTGCCTTCCA...CATGCTAAAGCCTATAAATACAACTGGGACATTAAAGCCTGACGACAGGGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR CCA 90 bp TGCCCTTCTCCATATCGTAGACCATCCTCGAGCTGCCAATGTAGTCAAAAGTTTCATCTGCCAGGGCCTTaGCAGTGTCTGTTACAAAGT +
Preference number: 4 (lower is better)
Translates to: CPSPYRRPSSSCQCSQKFHLPGP*QCLLQS
Trigger: ACTTTGTAACAGACACTGCCAAGGCCCTGGCAGATG...AAACTTTTGACTACATTGGCAGCTCGAGGATGGTCTACGATATGGAGAAGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR CCA 90 bp TCAGGGGCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGCATAAGTGGTGTTGGTaGGGCTGGAGACAGCGATGT +
Preference number: 4 (lower is better)
Translates to: SGAQCSLTLTLNLLCPSQHKWCW*GWRQRC
Trigger: ACATCGCTGTCTCCAGCCCCACCAACACCACTTATG...CTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGCCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CCA 90 bp GAGCAAACTCTGGCCCATAGGAATTGGAGTAAACACCAAACCCATCATTTGGGCACTGTACAACATAAGTaGTGTTGGTGGGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: EQTLAHRNWSKHQTHHLGTVQHK*CWWGWR
Trigger: TCTCCAGCCCCACCAACACCACTTATGTTGTACAGT...GCCCAAATGATGGGTTTGGTGTTTACTCCAATTCCTATGGGCCAGAGTTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR CCA 90 bp TGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGGCTGGCAAGAAAAGCTaGGGTCCTCCTCAGTATGAC +
Preference number: 4 (lower is better)
Translates to: CSLTLTLNLLCPSQSGRWAGKKS*GPPQYD
Trigger: GTCATACTGAGGAGGACCCCAGCTTTTCTTGCCAGC...CCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CCA 90 bp AGGTCCTGCCTGAGGATAGACTGGAACCATGAGTTGTTGGCTTTAATCAGGAACAGTCCAGGGAACCAATaGAATGTCACTGAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: RSCLRIDWNHELLALIRNSPGNQ*NVTEFL
Trigger: CAGGAACTCAGTGACATTCCATTGGTTCCCTGGACT...GTTCCTGATTAAAGCCAACAACTCATGGTTCCAGTCTATCCTCAGGCAGGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459963.5
CDS-3UTR TCA 90 bp GCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAGTTTGGGGATCAGCCTaGACTGTGTCGCTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: AQCSLTLTLNLLCPSQSGVWGSA*TVSLKL
Trigger: CAACTTCAGCGACACAGTTCAGGCTGATCCCCAAAC...TCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR TCA 90 bp TCAGGGGCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGTAGAGCTCCACTaGCTCAGTTCAAAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SGAQCSLTLTLNLLCPSQSVELH*LSSKAG
Trigger: TCCTGCCTTTGAACTGAGTCAGTGGAGCTCTACTGA...CTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGCCCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR GCA 90 bp TGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGCTTGGTCAAGGACACTaGAAGACCAGCAATTCGGCT +
Preference number: 4 (lower is better)
Translates to: CSLTLTLNLLCPSQSGRWLGQGH*KTSNSA
Trigger: AGCCGAATTGCTGGTCTTGCAGTGTCCTTGACCAAG...CCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR GCA 90 bp GACCTTAGGTCCTGCCTGAGGATAGACTGGAACCATGAGTTGTTGGCTTTAATCCATAAGCCAAACCATTaGCCAGCGAATTCCACTGTA +
Preference number: 4 (lower is better)
Translates to: DLRSCLRIDWNHELLALIHKPNH*PANSTV
Trigger: TACAGTGGAATTCGCTGGGCAATGGTTTGGCTTATG...GATTAAAGCCAACAACTCATGGTTCCAGTCTATCCTCAGGCAGGACCTAAGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR GCA 90 bp TCAGGGGCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGACATCAGGTGCCTTTTaGAAAGCTTCAGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: SGAQCSLTLTLNLLCPSQTSGAF*KASAAA
Trigger: GGCTGCTGCTGAAGCTTTGCAAAAGGCACCTGATGT...CTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGCCCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR GCA 90 bp TGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGGGTGGTCACATCAGGTaGCTTTTGCAAAGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: CSLTLTLNLLCPSQSGRWGGHIR*LLQSFS
Trigger: GCTGAAGCTTTGCAAAAGGCACCTGATGTGACCACC...CCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR GCA 90 bp TGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGGAAGTTGGTTCCTCCTaGAAGCTCATACAGAGCACG +
Preference number: 4 (lower is better)
Translates to: CSLTLTLNLLCPSQSGRWEVGSS*KLIQST
Trigger: CGTGCTCTGTATGAGCTTGCAGGAGGAACCAACTTC...CCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR GCA 90 bp TGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGTCCGTCTCATTAGAATaGAAAGGGCCCTGGACCCAT +
Preference number: 4 (lower is better)
Translates to: CSLTLTLNLLCPSQSGRWSVSLE*KGPWTH
Trigger: ATGGGTCCAGGGCCCTTTGCATTCTAATGAGACGGA...CCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR GCA 90 bp TTGGGGCCATCAGTCAATACCCACTGTAGGTCCTCCTCTTTCTCTACTACGTGGCCCACAGAACAAGATTaGTTTCGTCTCAAAAAGTCT +
Preference number: 4 (lower is better)
Translates to: LGPSVNTHCRSSSFSTTWPTEQD*FRLKKS
Trigger: AGACTTTTTGAGACGAAAGCAATCTTGTTCTGTGGG...CCACGTAGTAGAGAAAGAGGAGGACCTACAGTGGGTATTGACTGATGGCCCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467837.5
CDS-3UTR GCA 90 bp GCACCAGAGTGGTCAGCCAGAACAACGCCAGAGATGTTTCGAGCTCGAAGAAATGTCACAGACGATTTCTaGTTGATGACTTTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: APEWSARTTPEMFRARRNVTDDF*LMTLVS
Trigger: TGAAACCAAAGTCATCAAGCAGAAATCGTCTGTGAC...ATTTCTTCGAGCTCGAAACATCTCTGGCGTTGTTCTGGCTGACCACTCTGGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459963.5
CDS-3UTR CCA 90 bp TGCCCTTCTCCATATCGTAGACCATCCTCGAGCTGCCAATGTAGTCAAAAGTTTGCAGTGAGCAAACTCTaGCCCATAGGAATTGGAGTA +
Preference number: 4 (lower is better)
Translates to: CPSPYRRPSSSCQCSQKFAVSKL*PIGIGV
Trigger: TACTCCAATTCCTATGGGCCAGAGTTTGCTCACTGC...AAACTTTTGACTACATTGGCAGCTCGAGGATGGTCTACGATATGGAGAAGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR CCA 90 bp TGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGCATCTGCCAGGGCCTTaGCAGTGTCTGTTACAAAGT +
Preference number: 4 (lower is better)
Translates to: CSLTLTLNLLCPSQSGRWHLPGP*QCLLQS
Trigger: ACTTTGTAACAGACACTGCCAAGGCCCTGGCAGATG...CCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CCA 90 bp TCTTTCTCTACTACGTGGATAACCCCTGTGTCTCCACTAATTGAAGACTGGCAGTGCCTGAGGATAGACTaGAACCATGAGTTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: SFSTTWITPVSPLIEDWQCLRID*NHELLA
Trigger: AGCCAACAACTCATGGTTCCAGTCTATCCTCAGGCA...CTGCCAGTCTTCAATTAGTGGAGACACAGGGGTTATCCACGTAGTAGAGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR CCA 90 bp TATTTGTTATGGAAGGCACCAGAGTGGTCAGCCAGAACAACGCCAGAGATGTTTTGCCTGAGGATAGACTaGAACCATGAGTTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: YLLWKAPEWSARTTPEMFCLRID*NHELLA
Trigger: AGCCAACAACTCATGGTTCCAGTCTATCCTCAGGCA...AAACATCTCTGGCGTTGTTCTGGCTGACCACTCTGGTGCCTTCCATAACAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR CCA 90 bp AGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGCTGACTGTACAACATAAGTaGTGTTGGTGGGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: SLTLTLNLLCPSQSGRWLTVQHK*CWWGWR
Trigger: TCTCCAGCCCCACCAACACCACTTATGTTGTACAGT...CAGCCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CCA 90 bp AAAGATGGGGAAACTAAAGTCTTCATAAGCCAAACCATTGCCCAGCGAATTCCAACTTTACTTGGATCCTaGCACTGCTCTCGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: KDGETKVFISQTIAQRIPTLLGS*HCSRVR
Trigger: CCTCACCCGAGAGCAGTGCCAGGATCCAAGTAAAGT...TGGAATTCGCTGGGCAATGGTTTGGCTTATGAAGACTTTAGTTTCCCCATCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR CCA 90 bp TCAGGGGCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGGAATGCAAAGGGCCCTaGACCCATGAGTACTCATAC +
Preference number: 4 (lower is better)
Translates to: SGAQCSLTLTLNLLCPSQECKGP*THEYSY
Trigger: GTATGAGTACTCATGGGTCCAGGGCCCTTTGCATTC...CTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGCCCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CCA 90 bp CCACATCTGCCAGGGCCTTGGCAGTGTCTGTTACAAAGTTCAGGTCCTCTTCAGATTCTTCTGATTTCTTaGGCACACACTTATCGTAAC +
Preference number: 4 (lower is better)
Translates to: PHLPGPWQCLLQSSGPLQILLIS*AHTYRN
Trigger: GTTACGATAAGTGTGTGCCCAAGAAATCAGAAGAAT...CTGAAGAGGACCTGAACTTTGTAACAGACACTGCCAAGGCCCTGGCAGATGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR CCA 90 bp GGGATATATATCTTCCTCTCCACTGAGTTTCCCCTGCACAAACCTTTTAAGCGCGAAAAACGAGACATCTaGACAAAGTGGGAGAGGGTC +
Preference number: 4 (lower is better)
Translates to: GIYIFLSTEFPLHKPFKREKRDI*TKWERV
Trigger: GACCCTCTCCCACTTTGTCCAGATGTCTCGTTTTTC...GCGCTTAAAAGGTTTGTGCAGGGGAAACTCAGTGGAGAGGAAGATATATATCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000467837.5
CDS-3UTR TCA 90 bp TTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGCTGGGGATAGACTGGAACCATaGGTTGTTGGCTTTAATCAG +
Preference number: 4 (lower is better)
Translates to: FDPDIKPFMSFPVRKVAGDRLEP*VVGFNQ
Trigger: CTGATTAAAGCCAACAACTCATGGTTCCAGTCTATC...CCCAGCCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR TCA 90 bp CAAATGAGTCAACATTCTCTAACTGCACGGGAAACTTGCCCTTCTCCATATCGTCTGCTAGGCAACAAATaGTCAGAGAACTACCCAGTC +
Preference number: 4 (lower is better)
Translates to: QMSQHSLTARETCPSPYRLLGNK*SENYPV
Trigger: GACTGGGTAGTTCTCTGATCATTTGTTGCCTAGCAG...ACGATATGGAGAAGGGCAAGTTTCCCGTGCAGTTAGAGAATGTTGACTCATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459963.5
CDS-3UTR GCA 90 bp GCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGACCACTGAGTTTCCCCTaGACAAACCTGCTAGTAGGA +
Preference number: 4 (lower is better)
Translates to: AQCSLTLTLNLLCPSQSGPLSFP*TNLLVG
Trigger: TCCTACTAGCAGGTTTGTGCAGGGGAAACTCAGTGG...TCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294785.10
CDS-3UTR GCA 90 bp TCAGGGGCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCCACTGTATTTCTCTaGAGTGAGCAAACTCTGGCC +
Preference number: 4 (lower is better)
Translates to: SGAQCSLTLTLNLLCPSQSTVFL*SEQTLA
Trigger: GGCCAGAGTTTGCTCACTGCAGAGAAATACAGTGGA...CTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGCCCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR GCA 90 bp TTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGCTGGGAGACCATCCTCGAGCTaGCAATGTAGTCAAAAGTTT +
Preference number: 4 (lower is better)
Translates to: FDPDIKPFMSFPVRKVAGRPSSS*QCSQKF
Trigger: AAACTTTTGACTACATTGGCAGCTCGAGGATGGTCT...CCCAGCCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CCA 90 bp GCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAGACCAGCAATTCGGCTaGTTCTCCCTTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: AQCSLTLTLNLLCPSQSGDQQFG*FSLSAS
Trigger: AGAAGCTGAAAGGGAGAACCAGCCGAATTGCTGGTC...TCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CCA 90 bp CGTAGACCATCCTCGAGCTGCCAATGTAGTCAAAAGTTTCCCCTTGAAAGAAGAACCAAACCCATCATTTaGGCACTGTACACTAGGAGA +
Preference number: 4 (lower is better)
Translates to: RRPSSSCQCSQKFPLERRTKPII*ALYTRR
Trigger: TCTCCTAGTGTACAGTGCCCAAATGATGGGTTTGGT...TCTTCTTTCAAGGGGAAACTTTTGACTACATTGGCAGCTCGAGGATGGTCTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR CCA 90 bp AGGTCCTCCTCTTTCTCTACTACGTGGATAACCCCTGTGTCTCCACTAATTGAACTGGCCCATAGGAATTaGAGTAAACACCAAACCCAT +
Preference number: 4 (lower is better)
Translates to: RSSSFSTTWITPVSPLIELAHRN*SKHQTH
Trigger: ATGGGTTTGGTGTTTACTCCAATTCCTATGGGCCAG...TTCAATTAGTGGAGACACAGGGGTTATCCACGTAGTAGAGAAAGAGGAGGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000467837.5
CDS-3UTR CCA 90 bp TCAGGGGCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGGTGAAAAGAGCTGCATaGCACATAGTGGGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: SGAQCSLTLTLNLLCPSQVKRAA*HIVGRL
Trigger: CAACCTTCCCACTATGTGCCATGCAGCTCTTTTCAC...CTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGCCCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CCA 90 bp TCAGGGGCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGGTCACAGACGATTTCTaGGTTGATGCTGAAGGTGCT +
Preference number: 4 (lower is better)
Translates to: SGAQCSLTLTLNLLCPSQVTDDF*VDAEGA
Trigger: AGCACCTTCAGCATCAACCCAGAAATCGTCTGTGAC...CTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGCCCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CCA 90 bp TGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGTGCCTGAGGATAGACTaGAACCATGAGTTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: CSLTLTLNLLCPSQSGRWCLRID*NHELLA
Trigger: AGCCAACAACTCATGGTTCCAGTCTATCCTCAGGCA...CCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CCA 90 bp CTGTGTGCATCCAAAGCTCTAATGAAGTTCTTAAGGCCACCTGTCCCAGCTCCAATCCTTGTTTTCACTTaGGACTTTACTTGGATCCTG +
Preference number: 4 (lower is better)
Translates to: LCASKALMKFLRPPVPAPILVFT*DFTWIL
Trigger: CAGGATCCAAGTAAAGTCCCAAGTGAAAACAAGGAT...TGGAGCTGGGACAGGTGGCCTTAAGAACTTCATTAGAGCTTTGGATGCACACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR CCA 90 bp CAGTGTCTGTTACAAAGTTCAGGTCCTCTTCAGGGCTCAGCCATTCGGGATAGCTCTCCCTGTCTCTTTTaGATAGTTCCACTCTTTTAT +
Preference number: 4 (lower is better)
Translates to: QCLLQSSGPLQGSAIRDSSPCLF*IVPLFY
Trigger: ATAAAAGAGTGGAACTATCCAAAAGAGACAGGGAGA...GCTATCCCGAATGGCTGAGCCCTGAAGAGGACCTGAACTTTGTAACAGACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR GCA 90 bp TATTTCTCTGCAGTGAGCAAACTCTGGCCCATAGGAATTGGAGTAAACACCAAATCCACTGTATTTCTCTaGAGTGAGCAAACTCTGGCC +
Preference number: 4 (lower is better)
Translates to: YFSAVSKLWPIGIGVNTKSTVFL*SEQTLA
Trigger: GGCCAGAGTTTGCTCACTGCAGAGAAATACAGTGGA...TTTGGTGTTTACTCCAATTCCTATGGGCCAGAGTTTGCTCACTGCAGAGAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000467837.5
CDS-3UTR GCA 90 bp TCAGGGGCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGCATAAGCCAAACCATTaGCCAGCGAATTCCACTGTA +
Preference number: 4 (lower is better)
Translates to: SGAQCSLTLTLNLLCPSQHKPNH*PANSTV
Trigger: TACAGTGGAATTCGCTGGGCAATGGTTTGGCTTATG...CTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGCCCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR GCA 90 bp GCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAGTGCTGATGACAGCATaGATGTGTGAAAAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: AQCSLTLTLNLLCPSQSGVLMTA*MCEKSC
Trigger: GCAGCTCTTTTCACACATGCATGCTGTCATCAGCAC...TCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR GCA 90 bp GCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAACTGCACGGGAAACTTaGCCTTCTCCATATCGTAGA +
Preference number: 4 (lower is better)
Translates to: AQCSLTLTLNLLCPSQSGTARET*PSPYRR
Trigger: TCTACGATATGGAGAAGGGCAAGTTTCCCGTGCAGT...TCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR GCA 90 bp TCAGGGGCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAACATTCTCTAACTaGACGGGAAACTTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: SGAQCSLTLTLNLLCPSQSTFSN*TGNLPF
Trigger: GAAGGGCAAGTTTCCCGTGCAGTTAGAGAATGTTGA...CTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGCCCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CCA 90 bp GCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAGCAGTGAGCAAACTCTaGCCCATAGGAATTGGAGTA +
Preference number: 4 (lower is better)
Translates to: AQCSLTLTLNLLCPSQSGAVSKL*PIGIGV
Trigger: TACTCCAATTCCTATGGGCCAGAGTTTGCTCACTGC...TCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CCA 90 bp TATTTCTCTGCAGTGAGCAAACTCTGGCCCATAGGAATTGGAGTAAACACCAAAGCAGTGAGCAAACTCTaGCCCATAGGAATTGGAGTA +
Preference number: 4 (lower is better)
Translates to: YFSAVSKLWPIGIGVNTKAVSKL*PIGIGV
Trigger: TACTCCAATTCCTATGGGCCAGAGTTTGCTCACTGC...TTTGGTGTTTACTCCAATTCCTATGGGCCAGAGTTTGCTCACTGCAGAGAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000467837.5
CDS-3UTR CCA 90 bp GCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGAGATCCTCCACCTaGTTCCGTACAGACTCATTT +
Preference number: 4 (lower is better)
Translates to: AQCSLTLTLNLLCPSQSGRRSST*FRTDSF
Trigger: AAATGAGTCTGTACGGAACCAGGTGGAGGATCTCCT...TCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CCA 90 bp TCTTTCTCTACTACGTGGATAACCCCTGTGTCTCCACTAATTGAAGACTGGCAGAAGGGCAAATTAGGGTaGGTAACTAGGGAGTTAAAC +
Preference number: 4 (lower is better)
Translates to: SFSTTWITPVSPLIEDWQKGKLG*VTRELN
Trigger: GTTTAACTCCCTAGTTACCCACCCTAATTTGCCCTT...CTGCCAGTCTTCAATTAGTGGAGACACAGGGGTTATCCACGTAGTAGAGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR TCA 90 bp CTGTACAACATAAGTGGTGTTGGTGGGGCTGGAGACAGCGATGTAATGTTGAAGTCAAAAGTTTCCCCTTaGAAGAAGACAAACATGACA +
Preference number: 4 (lower is better)
Translates to: LYNISGVGGAGDSDVMLKSKVSP*KKTNMT
Trigger: TGTCATGTTTGTCTTCTTTCAAGGGGAAACTTTTGA...CTTCAACATTACATCGCTGTCTCCAGCCCCACCAACACCACTTATGTTGTACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR TCA 90 bp AGGTCCTGCCTGAGGATAGACTGGAACCATGAGTTGTTGGCTTTAATCAGGAACTCAAAAGTTTCCCCTTaGAAGAAGACAAACATGACA +
Preference number: 4 (lower is better)
Translates to: RSCLRIDWNHELLALIRNSKVSP*KKTNMT
Trigger: TGTCATGTTTGTCTTCTTTCAAGGGGAAACTTTTGA...GTTCCTGATTAAAGCCAACAACTCATGGTTCCAGTCTATCCTCAGGCAGGACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR TCA 90 bp TGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGACAGACTCATTTTTCTaGGAAACAGGATCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: CSLTLTLNLLCPSQSGRWTDSFF*ETGSVC
Trigger: GCACACAGATCCTGTTTCTCAGAAAAATGAGTCTGT...CCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR TCA 90 bp CAAATGAGTCAACATTCTCTAACTGCACGGGAAACTTGCCCTTCTCCATATCGTGATAGACTGGAACCATaGGTTGTTGGCTTTAATCAG +
Preference number: 4 (lower is better)
Translates to: QMSQHSLTARETCPSPYRDRLEP*VVGFNQ
Trigger: CTGATTAAAGCCAACAACTCATGGTTCCAGTCTATC...ACGATATGGAGAAGGGCAAGTTTCCCGTGCAGTTAGAGAATGTTGACTCATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR GCA 90 bp GCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAAATCCCTGGTAAAATaGTTGCTCTCCAGCAGAACC +
Preference number: 4 (lower is better)
Translates to: AQCSLTLTLNLLCPSQSGKSLVK*LLSSRT
Trigger: GGTTCTGCTGGAGAGCAAGCATTTTACCAGGGATTT...TCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR GCA 90 bp ACAACCCTGTCGTCAGGCTTTAATGTCCCAGTTGTATTTATAGGCTTTAGCATGTCAACATTCTCTAACTaGACGGGAAACTTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: TTLSSGFNVPVVFIGFSMSTFSN*TGNLPF
Trigger: GAAGGGCAAGTTTCCCGTGCAGTTAGAGAATGTTGA...CATGCTAAAGCCTATAAATACAACTGGGACATTAAAGCCTGACGACAGGGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR GCA 90 bp ACAACCCTGTCGTCAGGCTTTAATGTCCCAGTTGTATTTATAGGCTTTAGCATGTGGCACCCAGCTATGTaGCTCAAAGGGTTATTACAA +
Preference number: 4 (lower is better)
Translates to: TTLSSGFNVPVVFIGFSMWHPAM*LKGLLQ
Trigger: TTGTAATAACCCTTTGAGGCACATAGCTGGGTGCCA...CATGCTAAAGCCTATAAATACAACTGGGACATTAAAGCCTGACGACAGGGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR CCA 90 bp GCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGATCTTTCTCTACTACGTaGATAACCCCTGTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: AQCSLTLTLNLLCPSQSGSFSTT*ITPVSP
Trigger: TGGAGACACAGGGGTTATCCACGTAGTAGAGAAAGA...TCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CCA 90 bp GCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAACCAAACCCATCATTTaGGCACTGTACACTAGGAGA +
Preference number: 4 (lower is better)
Translates to: AQCSLTLTLNLLCPSQSGTKPII*ALYTRR
Trigger: TCTCCTAGTGTACAGTGCCCAAATGATGGGTTTGGT...TCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CCA 90 bp TATTTCTCTGCAGTGAGCAAACTCTGGCCCATAGGAATTGGAGTAAACACCAAAACCAAACCCATCATTTaGGCACTGTACACTAGGAGA +
Preference number: 4 (lower is better)
Translates to: YFSAVSKLWPIGIGVNTKTKPII*ALYTRR
Trigger: TCTCCTAGTGTACAGTGCCCAAATGATGGGTTTGGT...TTTGGTGTTTACTCCAATTCCTATGGGCCAGAGTTTGCTCACTGCAGAGAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000467837.5
CDS-3UTR CCA 90 bp GCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGACTGGCCCATAGGAATTaGAGTAAACACCAAACCCAT +
Preference number: 4 (lower is better)
Translates to: AQCSLTLTLNLLCPSQSGLAHRN*SKHQTH
Trigger: ATGGGTTTGGTGTTTACTCCAATTCCTATGGGCCAG...TCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR GCA 90 bp ATTAATGTTCTCAGCAGTGTCGTAAATACTCTGGTAATATTTGTTATGGAAGGCGCTCGAAGAAATCGCTaGAGGGAAGATGGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: INVLSSVVNTLVIFVMEGARRNR*REDGGR
Trigger: TCTCCCACCATCTTCCCTGCAGCGATTTCTTCGAGC...GCCTTCCATAACAAATATTACCAGAGTATTTACGACACTGCTGAGAACATTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR CCA 90 bp TCAGGGGCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGATCCTTGTTTTCACTTaGGACTTTACTTGGATCCTG +
Preference number: 4 (lower is better)
Translates to: SGAQCSLTLTLNLLCPSQILVFT*DFTWIL
Trigger: CAGGATCCAAGTAAAGTCCCAAGTGAAAACAAGGAT...CTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGCCCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR TCA 90 bp TCAGGGGCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAAAAGTTTCCCCTTaGAAGAAGACAAACATGACA +
Preference number: 4 (lower is better)
Translates to: SGAQCSLTLTLNLLCPSQSKVSP*KKTNMT
Trigger: TGTCATGTTTGTCTTCTTTCAAGGGGAAACTTTTGA...CTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGCCCCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CCA 90 bp TGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGTCTCCCTGTCTCTTTTaGATAGTTCCACTCTTTTAT +
Preference number: 4 (lower is better)
Translates to: CSLTLTLNLLCPSQSGRWSPCLF*IVPLFY
Trigger: ATAAAAGAGTGGAACTATCCAAAAGAGACAGGGAGA...CCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CAA 90 bp GAGCACGTCCCAGCACCGTGGCCACATCTGCCAGGGCCTTGGCAGTGTCTGTTACACATCAGGTGCCTTTaGCAAAGCTTCAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: EHVPAPWPHLPGPWQCLLHIRCL*QSFSSS
Trigger: GCTGCTGCTGAAGCTTTGCAAAAGGCACCTGATGTG...TAACAGACACTGCCAAGGCCCTGGCAGATGTGGCCACGGTGCTGGGACGTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR CAA 90 bp TCCTCCTGCAAGCTCATACAGAGCACGTCCCAGCACCGTGGCCACATCTGCCAGACTGTGTCGCTGAAGTaGGTTCCTCCTGCAAGCTCA +
Preference number: 5 (lower is better)
Translates to: SSCKLIQSTSQHRGHICQTVSLK*VPPASS
Trigger: TGAGCTTGCAGGAGGAACCAACTTCAGCGACACAGT...CTGGCAGATGTGGCCACGGTGCTGGGACGTGCTCTGTATGAGCTTGCAGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS TCA 90 bp GGGGAGTCGGTCCGTCTCATTAGAATGCAAAGGGCCCTGGACCCATaGGTACTCATACAGCTGCACAGAAGATGCGCCACAACACACGGC +
Preference number: 5 (lower is better)
Translates to: GESVRLIRMQRALDP*VLIQLHRRCATTHG
Trigger: GCCGTGTGTTGTGGCGCATCTTCTGTGCAGCTGTATGAGTACTCATGGGTCCAGGGCCCTTTGCATTCTAATGAGACGGACCGACTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469159.1
CDS-3UTR CAA 90 bp GAGCACGTCCCAGCACCGTGGCCACATCTGCCAGGGCCTTGGCAGTGTCTGTTATGTGGTGTTCATCCTTaGGCCAACACCCAATCCAAT +
Preference number: 5 (lower is better)
Translates to: EHVPAPWPHLPGPWQCLLCGVHP*ANTQSN
Trigger: ATTGGATTGGGTGTTGGCCAAAGGATGAACACCACA...TAACAGACACTGCCAAGGCCCTGGCAGATGTGGCCACGGTGCTGGGACGTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459963.5
CDS GCA 90 bp AAAGAAGACAAACATGACATTGCGGGGCAGGGTGGTCACATCAGGTaGCTTTTGCAAAGCTTCAGCAGCAGCCAGCCGGGTGGCAGCAAC +
Preference number: 5 (lower is better)
Translates to: KEDKHDIAGQGGHIR*LLQSFSSSQPGGSN
Trigger: GTTGCTGCCACCCGGCTGGCTGCTGCTGAAGCTTTGCAAAAGGCACCTGATGTGACCACCCTGCCCCGCAATGTCATGTTTGTCTTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424754.5
CDS GCA 90 bp GCAGTAGAACGCACACACCGGGGGAGTCGGTCCGTCTCATTAGAATaGAAAGGGCCCTGGACCCATGAGTACTCATACAGCTGCACAGAA +
Preference number: 5 (lower is better)
Translates to: AVERTHRGSRSVSLE*KGPWTHEYSYSCTE
Trigger: TTCTGTGCAGCTGTATGAGTACTCATGGGTCCAGGGCCCTTTGCATTCTAATGAGACGGACCGACTCCCCCGGTGTGTGCGTTCTACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469159.1
CDS CCA 90 bp ACACACCGGGGGAGTCGGTCCGTCTCATTAGAATGCAAAGGGCCCTaGACCCATGAGTACTCATACAGCTGCACAGAAGATGCGCCACAA +
Preference number: 5 (lower is better)
Translates to: THRGSRSVSLECKGP*THEYSYSCTEDAPQ
Trigger: TTGTGGCGCATCTTCTGTGCAGCTGTATGAGTACTCATGGGTCCAGGGCCCTTTGCATTCTAATGAGACGGACCGACTCCCCCGGTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469159.1
CDS-3UTR CAA 90 bp GAGCACGTCCCAGCACCGTGGCCACATCTGCCAGGGCCTTGGCAGTGTCTGTTATGGAACCATGAGTTGTaGGCTTTAATCAGGAACCCA +
Preference number: 5 (lower is better)
Translates to: EHVPAPWPHLPGPWQCLLWNHEL*ALIRNP
Trigger: TGGGTTCCTGATTAAAGCCAACAACTCATGGTTCCA...TAACAGACACTGCCAAGGCCCTGGCAGATGTGGCCACGGTGCTGGGACGTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR CAA 90 bp CTGAGTTTCCCCTGCACAAACCTTTTAAGCGCCGCACAGCACCCACAGAACAAGGGTGGGTGGCTGGGGTaGTGGGAAAAACGAGACATC +
Preference number: 5 (lower is better)
Translates to: LSFPCTNLLSAAQHPQNKGGWLG*WEKRDI
Trigger: GATGTCTCGTTTTTCCCACAACCCCAGCCACCCACC...CTTGTTCTGTGGGTGCTGTGCGGCGCTTAAAAGGTTTGTGCAGGGGAAACTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000467837.5
CDS-3UTR CAA 90 bp CAGGACTGGGCTTGGTCAAGGACACTGCAAGACCAGCAATTCGGCTGGTTCTCCTCCCTGGTAAAATGCTaGCTCTCCAGCAGAACCATG +
Preference number: 5 (lower is better)
Translates to: QDWAWSRTLQDQQFGWFSSLVKC*LSSRTM
Trigger: CATGGTTCTGCTGGAGAGCAAGCATTTTACCAGGGA...GGAGAACCAGCCGAATTGCTGGTCTTGCAGTGTCCTTGACCAAGCCCAGTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000467837.5
CDS-3UTR CAA 90 bp AACGACTATCCAGCCGGGTGGCAGCAACCACAACCCTGTCGTCAGGCTTTAATGACATCTGCCAGGGCCTaGGCAGTGTCTGTTACAAAG +
Preference number: 5 (lower is better)
Translates to: NDYPAGWQQPQPCRQALMTSARA*AVSVTK
Trigger: CTTTGTAACAGACACTGCCAAGGCCCTGGCAGATGT...CATTAAAGCCTGACGACAGGGTTGTGGTTGCTGCCACCCGGCTGGATAGTCGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR CAA 90 bp CTGATTTGGCCTCCTGAGGATGACAGCAGGGACACCAGCACCACTCTTCTCCAAACATCTGCCAGGGCCTaGGCAGTGTCTGTTACAAAG +
Preference number: 5 (lower is better)
Translates to: LIWPPEDDSRDTSTTLLQTSARA*AVSVTK
Trigger: CTTTGTAACAGACACTGCCAAGGCCCTGGCAGATGT...TTGGAGAAGAGTGGTGCTGGTGTCCCTGCTGTCATCCTCAGGAGGCCAAATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR CAA 90 bp CACCAGAGTGGTCAGCCAGAACAACGCCAGAGATGTTTCGAGCTCGAAGAAATCCAGGCGGGTAACCGTTaGGGGATCAGCCTGAACTGT +
Preference number: 5 (lower is better)
Translates to: HQSGQPEQRQRCFELEEIQAGNR*GISLNC
Trigger: ACAGTTCAGGCTGATCCCCAAACGGTTACCCGCCTG...GATTTCTTCGAGCTCGAAACATCTCTGGCGTTGTTCTGGCTGACCACTCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR CAA 90 bp GGTTCCTCCTGCAAGCTCATACAGAGCACGTCCCAGCACCGTGGCCACATCTGCTGGAACCATGAGTTGTaGGCTTTAATCAGGAACCCA +
Preference number: 5 (lower is better)
Translates to: GSSCKLIQSTSQHRGHICWNHEL*ALIRNP
Trigger: TGGGTTCCTGATTAAAGCCAACAACTCATGGTTCCA...GCAGATGTGGCCACGGTGCTGGGACGTGCTCTGTATGAGCTTGCAGGAGGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS TCA 90 bp ACTCATACAGCTGCACAGAAGATGCGCCACAACACACGGCTAGGGTaGTCCTCTTCTCACTCGTTCCCTCTACCCTCTATCAGTGCCATG +
Preference number: 5 (lower is better)
Translates to: THTAAQKMRHNTRLG*SSSHSFPLPSISAM
Trigger: CATGGCACTGATAGAGGGTAGAGGGAACGAGTGAGAAGAGGATCACCCTAGCCGTGTGTTGTGGCGCATCTTCTGTGCAGCTGTATGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469159.1
CDS CCA 90 bp ACACCCACCACCACTCACATCCTTGTTTTCACTTGGGACTTTACTTaGATCCTGGCACTGCTCTCGGGTGAGGTTGACCACTGTGCCAGT +
Preference number: 5 (lower is better)
Translates to: TPTTTHILVFTWDFT*ILALLSGEVDHCAS
Trigger: ACTGGCACAGTGGTCAACCTCACCCGAGAGCAGTGCCAGGATCCAAGTAAAGTCCCAAGTGAAAACAAGGATGTGAGTGGTGGTGGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491390.1
CDS CCA 90 bp AGGGCACTTCCAACACCCACCACCACTCACATCCTTGTTTTCACTTaGGACTTTACTTGGATCCTGGCACTGCTCTCGGGTGAGGTTGAC +
Preference number: 5 (lower is better)
Translates to: RALPTPTTTHILVFT*DFTWILALLSGEVD
Trigger: GTCAACCTCACCCGAGAGCAGTGCCAGGATCCAAGTAAAGTCCCAAGTGAAAACAAGGATGTGAGTGGTGGTGGGTGTTGGAAGTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491390.1
CDS-3UTR CAA 90 bp ATCCTTTGGCCAACACCCAATCCAATCCTGTCTCTTACCCTGTCTCACAGGCCCAAGACAAACATGACATaGCGGGGCAGGGTGGTCACA +
Preference number: 5 (lower is better)
Translates to: ILWPTPNPILSLTLSHRPKTNMT*RGRVVT
Trigger: TGTGACCACCCTGCCCCGCAATGTCATGTTTGTCTT...GGGCCTGTGAGACAGGGTAAGAGACAGGATTGGATTGGGTGTTGGCCAAAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459963.5
CDS-3UTR CAA 90 bp GGTTCCTCCTGCAAGCTCATACAGAGCACGTCCCAGCACCGTGGCCACATCTGCATCAACTCAAGCTCTTaGCTGGCGATGAGAAATATC +
Preference number: 5 (lower is better)
Translates to: GSSCKLIQSTSQHRGHICINSSS*LAMRNI
Trigger: GATATTTCTCATCGCCAGCAAAGAGCTTGAGTTGAT...GCAGATGTGGCCACGGTGCTGGGACGTGCTCTGTATGAGCTTGCAGGAGGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS GCA 90 bp TCATTAGAATGCAAAGGGCCCTGGACCCATGAGTACTCATACAGCTaGACAGAAGATGCGCCACAACACACGGCTAGGGTGATCCTCTTC +
Preference number: 5 (lower is better)
Translates to: SLECKGPWTHEYSYS*TEDAPQHTARVILF
Trigger: GAAGAGGATCACCCTAGCCGTGTGTTGTGGCGCATCTTCTGTGCAGCTGTATGAGTACTCATGGGTCCAGGGCCCTTTGCATTCTAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469159.1
CDS CCA 90 bp AACGCGAGGAAGAAAGCTAACTTTCACACCTGTTCCTTTCGACTGTaGGGTGGGTGGCTGGGGTTGTGGGAAAAACGAGACATCTGGACA +
Preference number: 5 (lower is better)
Translates to: NARKKANFHTCSFRL*GGWLGLWEKRDIWT
Trigger: TGTCCAGATGTCTCGTTTTTCCCACAACCCCAGCCACCCACCCCACAGTCGAAAGGAACAGGTGTGAAAGTTAGCTTTCTTCCTCGCGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467837.5
CDS-3UTR CAA 90 bp TTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGCTGGGGATGCTGAAGGTGCTTaGGATGGAGCTGCGCCGCAT +
Preference number: 5 (lower is better)
Translates to: FDPDIKPFMSFPVRKVAGDAEGA*DGAAPH
Trigger: ATGCGGCGCAGCTCCATCCAAAGCACCTTCAGCATC...CCCAGCCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CAA 90 bp ACCAGCACCACTCTTCTCCAATGTGGCCAGGAGATCCTCCACCTATCCTTAATGACTGTGTCGCTGAAGTaGGTTCCTCCTGCAAGCTCA +
Preference number: 5 (lower is better)
Translates to: TSTTLLQCGQEILHLSLMTVSLK*VPPASS
Trigger: TGAGCTTGCAGGAGGAACCAACTTCAGCGACACAGT...CATTAAGGATAGGTGGAGGATCTCCTGGCCACATTGGAGAAGAGTGGTGCTGGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459963.5
CDS-3UTR CAA 90 bp ATCTTCCTCTCCACTGAGTTTCCCCTGCACAAACCTTTTAAGCGCCGCACAGCATCCCTGGTAAAATGCTaGCTCTCCAGCAGAACCATG +
Preference number: 5 (lower is better)
Translates to: IFLSTEFPLHKPFKRRTASLVKC*LSSRTM
Trigger: CATGGTTCTGCTGGAGAGCAAGCATTTTACCAGGGA...TGCTGTGCGGCGCTTAAAAGGTTTGTGCAGGGGAAACTCAGTGGAGAGGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000467837.5
CDS-3UTR CAA 90 bp TGTCTGTTACAAAGTTCAGGTCCTCTTCAGGGCTCAGCCATTCGGGATAGCTCACACATAGTGGGAAGGTaGGTGCTGAGCCATTCTGAC +
Preference number: 5 (lower is better)
Translates to: CLLQSSGPLQGSAIRDSSHIVGR*VLSHSD
Trigger: GTCAGAATGGCTCAGCACCAACCTTCCCACTATGTG...TGAGCTATCCCGAATGGCTGAGCCCTGAAGAGGACCTGAACTTTGTAACAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR CAA 90 bp AGGGCTCAGCCATTCGGGATAGCTCACATTAATGTTCTCAGCAGTGTCGTAAATCAGGCGGGTAACCGTTaGGGGATCAGCCTGAACTGT +
Preference number: 5 (lower is better)
Translates to: RAQPFGIAHINVLSSVVNQAGNR*GISLNC
Trigger: ACAGTTCAGGCTGATCCCCAAACGGTTACCCGCCTG...ATTTACGACACTGCTGAGAACATTAATGTGAGCTATCCCGAATGGCTGAGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR CAA 90 bp TGTCTGTTACAAAGTTCAGGTCCTCTTCAGGGCTCAGCCATTCGGGATAGCTCACACTTGGGACTTTACTaGGATCCTGGCACTGCTCTC +
Preference number: 5 (lower is better)
Translates to: CLLQSSGPLQGSAIRDSSHLGLY*DPGTAL
Trigger: GAGAGCAGTGCCAGGATCCAAGTAAAGTCCCAAGTG...TGAGCTATCCCGAATGGCTGAGCCCTGAAGAGGACCTGAACTTTGTAACAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR CAA 90 bp CAGGTCCTCTTCAGGGCTCAGCCATTCGGGATAGCTCACATTAATGTTCTCAGCGTCCATGTAGCGCCATaGACAGTGACACTGCTAGTA +
Preference number: 5 (lower is better)
Translates to: QVLFRAQPFGIAHINVLSVHVAP*TVTLLV
Trigger: TACTAGCAGTGTCACTGTCAATGGCGCTACATGGAC...GCTGAGAACATTAATGTGAGCTATCCCGAATGGCTGAGCCCTGAAGAGGACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS GCA 90 bp TGGATGGAGCTGCGCCGCATGCAGGTGGCAGTGCTGATGACAGCATaGATGTGTGAAAAGAGCTGCTTGATGACTTTGGTTTCATTTTCA +
Preference number: 5 (lower is better)
Translates to: WMELRRMQVAVLMTA*MCEKSCLMTLVSFS
Trigger: TGAAAATGAAACCAAAGTCATCAAGCAGCTCTTTTCACACATGCATGCTGTCATCAGCACTGCCACCTGCATGCGGCGCAGCTCCATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424645.6
CDS GCA 90 bp CTCACATCCTTGTTTTCACTTGGGACTTTACTTGGATCCTGGCACTaGTCTCGGGTGAGGTTGACCACTGTGCCAGTCAAATTTGCCAAG +
Preference number: 5 (lower is better)
Translates to: LTSLFSLGTLLGSWH*SRVRLTTVPVKFAK
Trigger: CTTGGCAAATTTGACTGGCACAGTGGTCAACCTCACCCGAGAGCAGTGCCAGGATCCAAGTAAAGTCCCAAGTGAAAACAAGGATGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491390.1
CDS CCA 90 bp CCACCACTCACATCCTTGTTTTCACTTGGGACTTTACTTGGATCCTaGCACTGCTCTCGGGTGAGGTTGACCACTGTGCCAGTCAAATTT +
Preference number: 5 (lower is better)
Translates to: PPLTSLFSLGTLLGS*HCSRVRLTTVPVKF
Trigger: AAATTTGACTGGCACAGTGGTCAACCTCACCCGAGAGCAGTGCCAGGATCCAAGTAAAGTCCCAAGTGAAAACAAGGATGTGAGTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491390.1
CDS-3UTR CAA 90 bp TCAGGGGCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGCAGGCGGGTAACCGTTaGGGGATCAGCCTGAACTGT +
Preference number: 5 (lower is better)
Translates to: SGAQCSLTLTLNLLCPSQQAGNR*GISLNC
Trigger: ACAGTTCAGGCTGATCCCCAAACGGTTACCCGCCTG...CTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGCCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CAA 90 bp AGGGCCTTGGCAGTGTCTGTTACAAAGTTCAGGTCCTCTTCAGGGCTCAGCCATGACTGGAACCATGAGTaGTTGGCTTTAATCAGGAAC +
Preference number: 5 (lower is better)
Translates to: RALAVSVTKFRSSSGLSHDWNHE*LALIRN
Trigger: GTTCCTGATTAAAGCCAACAACTCATGGTTCCAGTC...ATGGCTGAGCCCTGAAGAGGACCTGAACTTTGTAACAGACACTGCCAAGGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR CAA 90 bp CGTAGACCATCCTCGAGCTGCCAATGTAGTCAAAAGTTTCCCCTTGAAAGAAGATGCTCTCGGGTGAGGTaGACCACTGTGCCAGTCAAA +
Preference number: 5 (lower is better)
Translates to: RRPSSSCQCSQKFPLERRCSRVR*TTVPVK
Trigger: TTTGACTGGCACAGTGGTCAACCTCACCCGAGAGCA...TCTTCTTTCAAGGGGAAACTTTTGACTACATTGGCAGCTCGAGGATGGTCTACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS TCA 90 bp TCACTCGTTCCCTCTACCCTCTATCAGTGCCATGCTCTAACCAATTaGGCTAACTGGCTGCTGTCCCTTTACCCTTCAGATGGTCCATTT +
Preference number: 5 (lower is better)
Translates to: SLVPSTLYQCHALTN*ANWLLSLYPSDGPF
Trigger: AAATGGACCATCTGAAGGGTAAAGGGACAGCAGCCAGTTAGCTCAATTGGTTAGAGCATGGCACTGATAGAGGGTAGAGGGAACGAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469159.1
CDS-3UTR CAA 90 bp AGGGCTCAGCCATTCGGGATAGCTCACATTAATGTTCTCAGCAGTGTCGTAAATCACATCAGGTGCCTTTaGCAAAGCTTCAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: RAQPFGIAHINVLSSVVNHIRCL*QSFSSS
Trigger: GCTGCTGCTGAAGCTTTGCAAAAGGCACCTGATGTG...ATTTACGACACTGCTGAGAACATTAATGTGAGCTATCCCGAATGGCTGAGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR CAA 90 bp TTGGGGCCATCAGTCAATACCCACTGTAGGTCCTCCTCTTTCTCTACTACGTGGGACTGGAACCATGAGTaGTTGGCTTTAATCAGGAAC +
Preference number: 5 (lower is better)
Translates to: LGPSVNTHCRSSSFSTTWDWNHE*LALIRN
Trigger: GTTCCTGATTAAAGCCAACAACTCATGGTTCCAGTC...CCACGTAGTAGAGAAAGAGGAGGACCTACAGTGGGTATTGACTGATGGCCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR CAA 90 bp AGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGCTGGACAGCGATGTAATGTaGAAGAGGCCCGTCACCCAA +
Preference number: 5 (lower is better)
Translates to: SLTLTLNLLCPSQSGRWLDSDVM*KRPVTQ
Trigger: TTGGGTGACGGGCCTCTTCAACATTACATCGCTGTC...CAGCCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CAA 90 bp CCGGGGAGCAATGAAAAGGACATCAGCTTTGGCATTGATGCAGTAGGTGACGATACTCAGGTTGTGATCTaGATAGCACTGCTTGATGAC +
Preference number: 5 (lower is better)
Translates to: PGSNEKDISFGIDAVGDDTQVVI*IALLDD
Trigger: GTCATCAAGCAGTGCTATCAAGATCACAACCTGAGT...ATCGTCACCTACTGCATCAATGCCAAAGCTGATGTCCTTTTCATTGCTCCCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR CAA 90 bp TGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGAAGACAAACATGACATaGCGGGGCAGGGTGGTCACA +
Preference number: 5 (lower is better)
Translates to: CSLTLTLNLLCPSQSGRWKTNMT*RGRVVT
Trigger: TGTGACCACCCTGCCCCGCAATGTCATGTTTGTCTT...CCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CAA 90 bp CAAATGAGTCAACATTCTCTAACTGCACGGGAAACTTGCCCTTCTCCATATCGTAAGACAAACATGACATaGCGGGGCAGGGTGGTCACA +
Preference number: 5 (lower is better)
Translates to: QMSQHSLTARETCPSPYRKTNMT*RGRVVT
Trigger: TGTGACCACCCTGCCCCGCAATGTCATGTTTGTCTT...ACGATATGGAGAAGGGCAAGTTTCCCGTGCAGTTAGAGAATGTTGACTCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368063.6
ENST00000459963.5
CDS-3UTR CAA 90 bp TGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGACATCTGCCAGGGCCTaGGCAGTGTCTGTTACAAAG +
Preference number: 5 (lower is better)
Translates to: CSLTLTLNLLCPSQSGRWTSARA*AVSVTK
Trigger: CTTTGTAACAGACACTGCCAAGGCCCTGGCAGATGT...CCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CAA 90 bp TGTCTGTTACAAAGTTCAGGTCCTCTTCAGGGCTCAGCCATTCGGGATAGCTCACTGTGCCAGTCAAATTaGCCAAGGCATACTGTACAA +
Preference number: 5 (lower is better)
Translates to: CLLQSSGPLQGSAIRDSSLCQSN*PRHTVQ
Trigger: TTGTACAGTATGCCTTGGCAAATTTGACTGGCACAG...TGAGCTATCCCGAATGGCTGAGCCCTGAAGAGGACCTGAACTTTGTAACAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR CAA 90 bp TCAGGGGCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGCACTTGGGACTTTACTaGGATCCTGGCACTGCTCTC +
Preference number: 5 (lower is better)
Translates to: SGAQCSLTLTLNLLCPSQHLGLY*DPGTAL
Trigger: GAGAGCAGTGCCAGGATCCAAGTAAAGTCCCAAGTG...CTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGCCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS TCA 90 bp GAATCCATCTCAACTCACACTGGCAGCCAATCTGATGAGTGGCGTTaGGCAGGCGAACACAGGGAGCTGTTTTATTTAAGGGGATATATA +
Preference number: 5 (lower is better)
Translates to: ESISTHTGSQSDEWR*AGEHRELFYLRGYI
Trigger: TATATATCCCCTTAAATAAAACAGCTCCCTGTGTTCGCCTGCTCAACGCCACTCATCAGATTGGCTGCCAGTGTGAGTTGAGATGGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465223.1
CDS-3UTR CAA 90 bp GCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGACACATAGTGGGAAGGTaGGTGCTGAGCCATTCTGAC +
Preference number: 5 (lower is better)
Translates to: AQCSLTLTLNLLCPSQSGHIVGR*VLSHSD
Trigger: GTCAGAATGGCTCAGCACCAACCTTCCCACTATGTG...TCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CAA 90 bp GCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGACACATCAGGTGCCTTTaGCAAAGCTTCAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: AQCSLTLTLNLLCPSQSGHIRCL*QSFSSS
Trigger: GCTGCTGCTGAAGCTTTGCAAAAGGCACCTGATGTG...TCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CAA 90 bp GCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAACTGTGTCGCTGAAGTaGGTTCCTCCTGCAAGCTCA +
Preference number: 5 (lower is better)
Translates to: AQCSLTLTLNLLCPSQSGTVSLK*VPPASS
Trigger: TGAGCTTGCAGGAGGAACCAACTTCAGCGACACAGT...TCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CAA 90 bp TTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGCTGGGTGGAACCATGAGTTGTaGGCTTTAATCAGGAACCCA +
Preference number: 5 (lower is better)
Translates to: FDPDIKPFMSFPVRKVAGWNHEL*ALIRNP
Trigger: TGGGTTCCTGATTAAAGCCAACAACTCATGGTTCCA...CCCAGCCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CAA 90 bp TATTTCTCTGCAGTGAGCAAACTCTGGCCCATAGGAATTGGAGTAAACACCAAAGACAGCGATGTAATGTaGAAGAGGCCCGTCACCCAA +
Preference number: 5 (lower is better)
Translates to: YFSAVSKLWPIGIGVNTKDSDVM*KRPVTQ
Trigger: TTGGGTGACGGGCCTCTTCAACATTACATCGCTGTC...TTTGGTGTTTACTCCAATTCCTATGGGCCAGAGTTTGCTCACTGCAGAGAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR CAA 90 bp CAACACCCAATCCAATCCTGTCTCTTACCCTGTCTCACAGGCCCTGGTTCCGTAACAGACGATTTCTGCTaGATGACTTTGGTTTCATTT +
Preference number: 5 (lower is better)
Translates to: QHPIQSCLLPCLTGPGSVTDDFC*MTLVSF
Trigger: AAATGAAACCAAAGTCATCAAGCAGAAATCGTCTGT...TACGGAACCAGGGCCTGTGAGACAGGGTAAGAGACAGGATTGGATTGGGTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459963.5
CDS-3UTR CAA 90 bp GCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGATCCCTGGTAAAATGCTaGCTCTCCAGCAGAACCATG +
Preference number: 5 (lower is better)
Translates to: AQCSLTLTLNLLCPSQSGSLVKC*LSSRTM
Trigger: CATGGTTCTGCTGGAGAGCAAGCATTTTACCAGGGA...TCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CAA 90 bp AGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGCTGCTGTGCCAGTCAAATTaGCCAAGGCATACTGTACAA +
Preference number: 5 (lower is better)
Translates to: SLTLTLNLLCPSQSGRWLLCQSN*PRHTVQ
Trigger: TTGTACAGTATGCCTTGGCAAATTTGACTGGCACAG...CAGCCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CAA 90 bp GACCTTAGGTCCTGCCTGAGGATAGACTGGAACCATGAGTTGTTGGCTTTAATCGATCCTTGTTTTCACTaGGGACTTTACTTGGATCCT +
Preference number: 5 (lower is better)
Translates to: DLRSCLRIDWNHELLALIDPCFH*GLYLDP
Trigger: AGGATCCAAGTAAAGTCCCAAGTGAAAACAAGGATC...GATTAAAGCCAACAACTCATGGTTCCAGTCTATCCTCAGGCAGGACCTAAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR CAA 90 bp ACTGTCAGGGTGATCAACTCAAGCTCTTTGCTGGCGATGAGAAATATCCGGGCATTCTCCCTGTCTCTTTaGGATAGTTCCACTCTTTTA +
Preference number: 5 (lower is better)
Translates to: TVRVINSSSLLAMRNIRAFSLSL*DSSTLL
Trigger: TAAAAGAGTGGAACTATCCAAAAGAGACAGGGAGAA...TGCCCGGATATTTCTCATCGCCAGCAAAGAGCTTGAGTTGATCACCCTGACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR CAA 90 bp TCAGGGGCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGACTCAGGTTGTGATCTaGATAGCACTGCTTGATGAC +
Preference number: 5 (lower is better)
Translates to: SGAQCSLTLTLNLLCPSQTQVVI*IALLDD
Trigger: GTCATCAAGCAGTGCTATCAAGATCACAACCTGAGT...CTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGCCCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CAA 90 bp ATTAATGTTCTCAGCAGTGTCGTAAATACTCTGGTAATATTTGTTATGGAAGGCGATGCTGAAGGTGCTTaGGATGGAGCTGCGCCGCAT +
Preference number: 5 (lower is better)
Translates to: INVLSSVVNTLVIFVMEGDAEGA*DGAAPH
Trigger: ATGCGGCGCAGCTCCATCCAAAGCACCTTCAGCATC...GCCTTCCATAACAAATATTACCAGAGTATTTACGACACTGCTGAGAACATTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR CAA 90 bp TGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGGACTGGAACCATGAGTaGTTGGCTTTAATCAGGAAC +
Preference number: 5 (lower is better)
Translates to: CSLTLTLNLLCPSQSGRWDWNHE*LALIRN
Trigger: GTTCCTGATTAAAGCCAACAACTCATGGTTCCAGTC...CCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CAA 90 bp TCAGGGGCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGGGGGCTCAATGTAGTTaGACCCTGACATTAAACCTT +
Preference number: 5 (lower is better)
Translates to: SGAQCSLTLTLNLLCPSQGAQCS*TLTLNL
Trigger: AAGGTTTAATGTCAGGGTCAAACTACATTGAGCCCC...CTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGCCCCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CAA 90 bp TGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAAGGTGGGGGGCTCAATGTAGTTaGACCCTGACATTAAACCTT +
Preference number: 5 (lower is better)
Translates to: CSLTLTLNLLCPSQSGRWGAQCS*TLTLNL
Trigger: AAGGTTTAATGTCAGGGTCAAACTACATTGAGCCCC...CCACCTTCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS-3UTR CAA 90 bp TCTTTCTCTACTACGTGGATAACCCCTGTGTCTCCACTAATTGAAGACTGGCAGACCCACAGAACAAGATaGCTTTCGTCTCAAAAAGTC +
Preference number: 5 (lower is better)
Translates to: SFSTTWITPVSPLIEDWQTHRTR*LSSQKV
Trigger: GACTTTTTGAGACGAAAGCAATCTTGTTCTGTGGGT...CTGCCAGTCTTCAATTAGTGGAGACACAGGGGTTATCCACGTAGTAGAGAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467837.5
CDS GCA 90 bp ACACTTATCGTAACAGATACATGTTCTACATGGCACCCAGCTATGTaGCTCAAAGGGTTATTACAAAGTCCATGTAGCGCCATTGACAGT +
Preference number: 5 (lower is better)
Translates to: TLIVTDTCSTWHPAM*LKGLLQSPCSAIDS
Trigger: ACTGTCAATGGCGCTACATGGACTTTGTAATAACCCTTTGAGGCACATAGCTGGGTGCCATGTAGAACATGTATCTGTTACGATAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS-3UTR CAA 90 bp TCAGGGGCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGGATCCTTGTTTTCACTaGGGACTTTACTTGGATCCT +
Preference number: 5 (lower is better)
Translates to: SGAQCSLTLTLNLLCPSQDPCFH*GLYLDP
Trigger: AGGATCCAAGTAAAGTCCCAAGTGAAAACAAGGATC...CTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGCCCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS GCA 90 bp ATGCAGGTGGCAGTGCTGATGACAGCATGCATGTGTGAAAAGAGCTaGTTGATGACTTTGGTTTCATTTTCATCTTCAAGAAGAAAGATG +
Preference number: 5 (lower is better)
Translates to: MQVAVLMTACMCEKS*LMTLVSFSSSRRKM
Trigger: CATCTTTCTTCTTGAAGATGAAAATGAAACCAAAGTCATCAAGCAGCTCTTTTCACACATGCATGCTGTCATCAGCACTGCCACCTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424645.6
CDS-3UTR CAA 90 bp GCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGAATCAACTCAAGCTCTTaGCTGGCGATGAGAAATATC +
Preference number: 5 (lower is better)
Translates to: AQCSLTLTLNLLCPSQSGINSSS*LAMRNI
Trigger: GATATTTCTCATCGCCAGCAAAGAGCTTGAGTTGAT...TCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS GCA 90 bp CATGCTCCACACATTGTAATCAGACAGGGGGTCACAGACGATTTCTaGTTGATGACTTTGGTTTCATTTTCATCTTCAAGAAGAAAGATG +
Preference number: 5 (lower is better)
Translates to: HAPHIVIRQGVTDDF*LMTLVSFSSSRRKM
Trigger: CATCTTTCTTCTTGAAGATGAAAATGAAACCAAAGTCATCAAGCAGAAATCGTCTGTGACCCCCTGTCTGATTACAATGTGTGGAGCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459963.5
CDS-3UTR CAA 90 bp GCTCAATGTAGTTTGACCCTGACATTAAACCTTTTATGTCCTTCCCAGTCAGGATTCTCCCTGTCTCTTTaGGATAGTTCCACTCTTTTA +
Preference number: 5 (lower is better)
Translates to: AQCSLTLTLNLLCPSQSGFSLSL*DSSTLL
Trigger: TAAAAGAGTGGAACTATCCAAAAGAGACAGGGAGAA...TCCTGACTGGGAAGGACATAAAAGGTTTAATGTCAGGGTCAAACTACATTGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294785.10
ENST00000368063.6
CDS CAA 90 bp GACAAACATGACATTGCGGGGCAGGGTGGTCACATCAGGTGCCTTTaGCAAAGCTTCAGCAGCAGCCAGCCGGGTGGCAGCAACCACAAC +
Preference number: 6 (lower is better)
Translates to: DKHDIAGQGGHIRCL*QSFSSSQPGGSNHN
Trigger: GTTGTGGTTGCTGCCACCCGGCTGGCTGCTGCTGAAGCTTTGCAAAAGGCACCTGATGTGACCACCCTGCCCCGCAATGTCATGTTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424754.5
CDS GCA 72 bp CGCACACACCGGGGGAGTCGGTCCGTCTCATTAGAATaGAAAGGGCCCTGGACCCATGAGTACTCATACAGC +
Preference number: 6 (lower is better)
Translates to: RTHRGSRSVSLE*KGPWTHEYSYS
Trigger: GCTGTATGAGTACTCATGGGTCCAGGGCCCTTTGCATTCTAATGAGACGGACCGACTCCCCCGGTGTGTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469159.1
CDS CCA 72 bp GGTGGGTGGCTGGGGTTGTGGGAAAAACGAGACATCTaGACAAAGTGGGAGAGGGTCAGGCTCGAAGTCCAG +
Preference number: 6 (lower is better)
Translates to: GGWLGLWEKRDI*TKWERVRLEVQ
Trigger: CTGGACTTCGAGCCTGACCCTCTCCCACTTTGTCCAGATGTCTCGTTTTTCCCACAACCCCAGCCACCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438008.5
ENST00000467837.5
ENST00000491332.1
CDS GCA 72 bp AAACATGACATTGCGGGGCAGGGTGGTCACATCAGGTaGCTTTTGCAAAGCTTCAGCAGCAGCCAGCCGGGT +
Preference number: 6 (lower is better)
Translates to: KHDIAGQGGHIR*LLQSFSSSQPG
Trigger: ACCCGGCTGGCTGCTGCTGAAGCTTTGCAAAAGGCACCTGATGTGACCACCCTGCCCCGCAATGTCATGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424754.5
CDS GCA 72 bp TGCAAAGGGCCCTGGACCCATGAGTACTCATACAGCTaGACAGAAGATGCGCCACAACACACGGCTAGGGTG +
Preference number: 6 (lower is better)
Translates to: CKGPWTHEYSYS*TEDAPQHTARV
Trigger: CACCCTAGCCGTGTGTTGTGGCGCATCTTCTGTGCAGCTGTATGAGTACTCATGGGTCCAGGGCCCTTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469159.1
CDS CCA 72 bp CTGGGGTTGTGGGAAAAACGAGACATCTGGACAAAGTaGGAGAGGGTCAGGCTCGAAGTCCAGGAAGAGGCC +
Preference number: 6 (lower is better)
Translates to: LGLWEKRDIWTK*ERVRLEVQEEA
Trigger: GGCCTCTTCCTGGACTTCGAGCCTGACCCTCTCCCACTTTGTCCAGATGTCTCGTTTTTCCCACAACCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438008.5
ENST00000467837.5
ENST00000491332.1
CDS TCA 72 bp GCTGCACAGAAGATGCGCCACAACACACGGCTAGGGTaGTCCTCTTCTCACTCGTTCCCTCTACCCTCTATC +
Preference number: 6 (lower is better)
Translates to: AAQKMRHNTRLG*SSSHSFPLPSI
Trigger: GATAGAGGGTAGAGGGAACGAGTGAGAAGAGGATCACCCTAGCCGTGTGTTGTGGCGCATCTTCTGTGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469159.1
CDS TCA 72 bp GTCCGTCTCATTAGAATGCAAAGGGCCCTGGACCCATaGGTACTCATACAGCTGCACAGAAGATGCGCCACA +
Preference number: 6 (lower is better)
Translates to: VRLIRMQRALDP*VLIQLHRRCAT
Trigger: TGTGGCGCATCTTCTGTGCAGCTGTATGAGTACTCATGGGTCCAGGGCCCTTTGCATTCTAATGAGACGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469159.1
CDS CCA 72 bp CACAAACCTGTTCCTTTCGACTGTGGGGTGGGTGGCTaGGGTTGTGGGAAAAACGAGACATCTGGACAAAGT +
Preference number: 6 (lower is better)
Translates to: HKPVPFDCGVGG*GCGKNETSGQS
Trigger: ACTTTGTCCAGATGTCTCGTTTTTCCCACAACCCCAGCCACCCACCCCACAGTCGAAAGGAACAGGTTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438008.5
ENST00000491332.1
CDS CCA 72 bp GGGAGTCGGTCCGTCTCATTAGAATGCAAAGGGCCCTaGACCCATGAGTACTCATACAGCTGCACAGAAGAT +
Preference number: 6 (lower is better)
Translates to: GSRSVSLECKGP*THEYSYSCTED
Trigger: ATCTTCTGTGCAGCTGTATGAGTACTCATGGGTCCAGGGCCCTTTGCATTCTAATGAGACGGACCGACTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469159.1
CDS CCA 72 bp TTCACACCTGTTCCTTTCGACTGTGGGGTGGGTGGCTaGGGTTGTGGGAAAAACGAGACATCTGGACAAAGT +
Preference number: 6 (lower is better)
Translates to: FTPVPFDCGVGG*GCGKNETSGQS
Trigger: ACTTTGTCCAGATGTCTCGTTTTTCCCACAACCCCAGCCACCCACCCCACAGTCGAAAGGAACAGGTGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467837.5
CDS CCA 72 bp CCAACACCCACCACCACTCACATCCTTGTTTTCACTTaGGACTTTACTTGGATCCTGGCACTGCTCTCGGGT +
Preference number: 6 (lower is better)
Translates to: PTPTTTHILVFT*DFTWILALLSG
Trigger: ACCCGAGAGCAGTGCCAGGATCCAAGTAAAGTCCCAAGTGAAAACAAGGATGTGAGTGGTGGTGGGTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491390.1
CDS CAA 72 bp CCAGGGCACTTCCAACACCCACCACCACTCACATCCTaGTTTTCACTTGGGACTTTACTTGGATCCTGGCAC +
Preference number: 6 (lower is better)
Translates to: PGHFQHPPPLTS*FSLGTLLGSWH
Trigger: GTGCCAGGATCCAAGTAAAGTCCCAAGTGAAAACAAGGATGTGAGTGGTGGTGGGTGTTGGAAGTGCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491390.1
CDS TCA 72 bp AAGTTCTTAAGGCCACCCCTTGAAAGAAGACAAACATaGCATTGCGGGGCAGGGTGGTCACATCAGGTGCCT +
Preference number: 6 (lower is better)
Translates to: KFLRPPLERRQT*HCGAGWSHQVP
Trigger: AGGCACCTGATGTGACCACCCTGCCCCGCAATGTCATGTTTGTCTTCTTTCAAGGGGTGGCCTTAAGAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435149.1
CDS CCA 72 bp AAGAAAGCTAACTTTCACACCTGTTCCTTTCGACTGTaGGGTGGGTGGCTGGGGTTGTGGGAAAAACGAGAC +
Preference number: 6 (lower is better)
Translates to: KKANFHTCSFRL*GGWLGLWEKRD
Trigger: GTCTCGTTTTTCCCACAACCCCAGCCACCCACCCCACAGTCGAAAGGAACAGGTGTGAAAGTTAGCTTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467837.5
CDS CCA 72 bp ACATCCTTGTTTTCACTTGGGACTTTACTTGGATCCTaGCACTGCTCTCGGGTGAGGTTGACCACTGTGCCA +
Preference number: 6 (lower is better)
Translates to: TSLFSLGTLLGS*HCSRVRLTTVP
Trigger: TGGCACAGTGGTCAACCTCACCCGAGAGCAGTGCCAGGATCCAAGTAAAGTCCCAAGTGAAAACAAGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491390.1
CDS CCA 72 bp ACCACTCACATCCTTGTTTTCACTTGGGACTTTACTTaGATCCTGGCACTGCTCTCGGGTGAGGTTGACCAC +
Preference number: 6 (lower is better)
Translates to: TTHILVFTWDFT*ILALLSGEVDH
Trigger: GTGGTCAACCTCACCCGAGAGCAGTGCCAGGATCCAAGTAAAGTCCCAAGTGAAAACAAGGATGTGAGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491390.1
CDS CAA 72 bp GATGGTCCATTTTCACCCAGGCTTTTCAACACCCAATaGCTGAGGACTGCATCTCTCCACCTCTCCATCCCA +
Preference number: 6 (lower is better)
Translates to: DGPFSPRLFNTQ*LRTASLHLSIP
Trigger: TGGGATGGAGAGGTGGAGAGATGCAGTCCTCAGCAATTGGGTGTTGAAAAGCCTGGGTGAAAATGGACCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491390.1
CDS TCA 72 bp CCCTCTACCCTCTATCAGTGCCATGCTCTAACCAATTaGGCTAACTGGCTGCTGTCCCTTTACCCTTCAGAT +
Preference number: 6 (lower is better)
Translates to: PSTLYQCHALTN*ANWLLSLYPSD
Trigger: ATCTGAAGGGTAAAGGGACAGCAGCCAGTTAGCTCAATTGGTTAGAGCATGGCACTGATAGAGGGTAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469159.1
CDS TCA 72 bp TCAACTCACACTGGCAGCCAATCTGATGAGTGGCGTTaGGCAGGCGAACACAGGGAGCTGTTTTATTTAAGG +
Preference number: 6 (lower is better)
Translates to: STHTGSQSDEWR*AGEHRELFYLR
Trigger: CCTTAAATAAAACAGCTCCCTGTGTTCGCCTGCTCAACGCCACTCATCAGATTGGCTGCCAGTGTGAGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465223.1
CDS CAA 72 bp GCCTCAAAGGGTTATTACAAAGTCCATGTAGCGCCATaGACAGTGACACTGCTAGTAGGACGCAGAAAGACA +
Preference number: 6 (lower is better)
Translates to: ASKGYYKVHVAP*TVTLLVGRRKT
Trigger: TGTCTTTCTGCGTCCTACTAGCAGTGTCACTGTCAATGGCGCTACATGGACTTTGTAATAACCCTTTGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS GCA 72 bp GTAACAGATACATGTTCTACATGGCACCCAGCTATGTaGCTCAAAGGGTTATTACAAAGTCCATGTAGCGCC +
Preference number: 6 (lower is better)
Translates to: VTDTCSTWHPAM*LKGLLQSPCSA
Trigger: GGCGCTACATGGACTTTGTAATAACCCTTTGAGGCACATAGCTGGGTGCCATGTAGAACATGTATCTGTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS CCA 72 bp GGGCACACACTTATCGTAACAGATACATGTTCTACATaGCACCCAGCTATGTGCCTCAAAGGGTTATTACAA +
Preference number: 6 (lower is better)
Translates to: GHTLIVTDTCST*HPAMCLKGLLQ
Trigger: TTGTAATAACCCTTTGAGGCACATAGCTGGGTGCCATGTAGAACATGTATCTGTTACGATAAGTGTGTGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368063.6
CDS GCA 72 bp GCAGTGCTGATGACAGCATGCATGTGTGAAAAGAGCTaGTTGATGACTTTGGTTTCATTTTCATCTTCAAGA +
Preference number: 6 (lower is better)
Translates to: AVLMTACMCEKS*LMTLVSFSSSR
Trigger: TCTTGAAGATGAAAATGAAACCAAAGTCATCAAGCAGCTCTTTTCACACATGCATGCTGTCATCAGCACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424645.6
CDS CCA 72 bp ATTTATAAAGTGACAATAACAGTAAGACCTATTTTGTaGGGTTGTGGTTGGGGTTGTATGAGATGCACATGT +
Preference number: 6 (lower is better)
Translates to: IYKVTITVRPIL*GCGWGCMRCTC
Trigger: ACATGTGCATCTCATACAACCCCAACCACAACCCCACAAAATAGGTCTTACTGTTATTGTCACTTTATAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465223.1
CDS CAA 72 bp ATCATTTATAAAGTGACAATAACAGTAAGACCTATTTaGTGGGGTTGTGGTTGGGGTTGTATGAGATGCACA +
Preference number: 6 (lower is better)
Translates to: IIYKVTITVRPI*WGCGWGCMRCT
Trigger: TGTGCATCTCATACAACCCCAACCACAACCCCACAAAATAGGTCTTACTGTTATTGTCACTTTATAAATGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465223.1