Pregenerated sensors for NCR2 (Homo sapiens)
Ensembl gene IDs: ENSG00000096264Ensembl transcript IDs: ENST00000373083.8, ENST00000373086.3, ENST00000373089.10
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCCAGGCACCAGGGCAATaGGGGCTGCAGGGCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: GPGKVRDLLKVAGGFLGIQAPGQ*GLQGQG Trigger: GCCCTGGCCCTGCAGCCCCCATTGCCCTGGTGCCTG...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373083.8 ENST00000373086.3 |
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| CDS-3UTR CCA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCGGGCCTGGGCTGAGCTaGGTGCAGCAGAGACCTCCC | + |
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Preference number: 4 (lower is better) Translates to: GPGKVRDLLKVAGGFLGIGPGLS*VQQRPP Trigger: GGGAGGTCTCTGCTGCACCCAGCTCAGCCCAGGCCC...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373083.8 ENST00000373086.3 |
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| CDS-3UTR TCA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCCTGGGTCTGGGTCTGTaGAGAGACCAGGTCGCGGGG | + |
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Preference number: 4 (lower is better) Translates to: GPGKVRDLLKVAGGFLGILGLGL*RDQVAG Trigger: CCCCGCGACCTGGTCTCTTCACAGACCCAGACCCAG...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373083.8 ENST00000373086.3 |
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| CDS-3UTR TCA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCCCAGACGAGCAGGGCTaGCAGCACCAGGCTCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: GPGKVRDLLKVAGGFLGIPDEQG*QHQALG Trigger: GCCAAGAGCCTGGTGCTGTCAGCCCTGCTCGTCTGG...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373083.8 ENST00000373086.3 |
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| CDS-3UTR CCA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCGGCCAGGGCGGAGCGTaGAGTTCTGTGGCCTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: GPGKVRDLLKVAGGFLGIGQGGA*SSVAWK Trigger: CTTCCAGGCCACAGAACTCCACGCTCCGCCCTGGCC...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373086.3 |
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| CDS-3UTR CCA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCCCCGTGGGCGGGTACTaGCATCTCACGGTTAGCGTC | + |
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Preference number: 4 (lower is better) Translates to: GPGKVRDLLKVAGGFLGIPVGGY*HLTVSV Trigger: GACGCTAACCGTGAGATGCCAGTACCCGCCCACGGG...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373083.8 ENST00000373086.3 |
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| CDS-3UTR CCA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCGTCTGGCTCCTGCAGTaGGAGGCACACAGCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: GPGKVRDLLKVAGGFLGIVWLLQ*EAHSSG Trigger: CCCAGAGCTGTGTGCCTCCCACTGCAGGAGCCAGAC...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373083.8 ENST00000373086.3 |
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| CDS-3UTR CCA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCGGCCAGGGCGGAGCGTaGAGTTCTGTGGCTGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: GPGKVRDLLKVAGGFLGIGQGGA*SSVAVK Trigger: CTTCACAGCCACAGAACTCCACGCTCCGCCCTGGCC...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373083.8 |
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| CDS-3UTR TCA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCGCCTTGGATTGTGCCTaGGAGCCTGGGAACAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GPGKVRDLLKVAGGFLGIALDCA*EPGNSS Trigger: GCTGCTGTTCCCAGGCTCTCAGGCACAATCCAAGGC...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373083.8 ENST00000373086.3 |
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| CDS-3UTR TCA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCGGGAGAGGACGGGTGTaGAGGGACAGGGATGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: GPGKVRDLLKVAGGFLGIGRGRV*RDRDGR Trigger: TCTACCATCCCTGTCCCTTCACACCCGTCCTCTCCC...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373086.3 |
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| CDS-3UTR GCA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCTCTTCTCGTAGAGACTaGCCGTGGGCGGGTACTGGC | + |
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Preference number: 4 (lower is better) Translates to: GPGKVRDLLKVAGGFLGISSRRD*PWAGTG Trigger: GCCAGTACCCGCCCACGGGCAGTCTCTACGAGAAGA...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373083.8 ENST00000373086.3 |
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| CDS-3UTR GCA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCGGCTTGTCTGGCTCCTaGAGTGGGAGGCACACAGCT | + |
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Preference number: 4 (lower is better) Translates to: GPGKVRDLLKVAGGFLGIGLSGS*SGRHTA Trigger: AGCTGTGTGCCTCCCACTGCAGGAGCCAGACAAGCC...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373083.8 ENST00000373086.3 |
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| CDS-3UTR CCA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCAGACAGGCTGAGGCCTaGGTTGGGGAGATGGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: GPGKVRDLLKVAGGFLGIRQAEA*VGEMGD Trigger: GTCTCCCATCTCCCCAACCCAGGCCTCAGCCTGTCT...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373083.8 |
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| CDS-3UTR CCA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCATGGGAGGGGACACCTaGAGAAGACTGGGGAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: GPGKVRDLLKVAGGFLGIMGGDT*RRLGRG Trigger: CCCTCTCCCCAGTCTTCTCCAGGTGTCCCCTCCCAT...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373083.8 |
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| CDS-3UTR CCA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCGCTCGCCAGGCCATGTaGTCCTTTTCCTGTGCGCTC | + |
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Preference number: 4 (lower is better) Translates to: GPGKVRDLLKVAGGFLGIARQAM*SFSCAL Trigger: GAGCGCACAGGAAAAGGACCACATGGCCTGGCGAGC...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373083.8 ENST00000373086.3 |
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| CDS-3UTR CCA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCCGTAGAGACTGCCCGTaGGCGGGTACTGGCATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GPGKVRDLLKVAGGFLGIRRDCP*AGTGIS Trigger: TGAGATGCCAGTACCCGCCCACGGGCAGTCTCTACG...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373083.8 ENST00000373086.3 |
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| CDS-3UTR CCA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCCCCCCTGGTGCCCTGTaGCTCAGTGGGAAGTGTCTA | + |
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Preference number: 4 (lower is better) Translates to: GPGKVRDLLKVAGGFLGIPPGAL*LSGKCL Trigger: TAGACACTTCCCACTGAGCCACAGGGCACCAGGGGG...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENST00000373083.8 ENST00000373086.3 |
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| CDS-3UTR TCA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCATCTCCAGCTGTAGGTaGGTCTGGGTCTGGTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: GPGKVRDLLKVAGGFLGIISSCR*VWVWWA Trigger: AGCCCACCAGACCCAGACTCACCTACAGCTGGAGAT...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373083.8 |
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| CDS-3UTR TCA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCATTGGGAGCTGGGCCTaGTTCTGCTGCTCTTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: GPGKVRDLLKVAGGFLGIIGSWA*FCCSSS Trigger: GCTGGAAGAGCAGCAGAATCAGGCCCAGCTCCCAAT...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373083.8 |
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| CDS-3UTR GCA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCGTGGTCCTTTTCCTGTaGGCTCATGGGAGGGGACAC | + |
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Preference number: 4 (lower is better) Translates to: GPGKVRDLLKVAGGFLGIVVLFL*AHGRGH Trigger: GTGTCCCCTCCCATGAGCGCACAGGAAAAGGACCAC...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373083.8 |
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| CDS-3UTR CCA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCTTGTGCCTGAGAGCCTaGGAACAGCAGCAGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: GPGKVRDLLKVAGGFLGILCLRA*EQQQQQ Trigger: CTGCTGCTGCTGCTGTTCCCAGGCTCTCAGGCACAA...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373083.8 ENST00000373086.3 |
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| CDS-3UTR TCA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCGGTCGTCCCAGATTGTaGATCGAGAGGTCCAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: GPGKVRDLLKVAGGFLGIGRPRL*IERSKP Trigger: TGGCTTGGACCTCTCGATTCACAATCTGGGACGACC...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373083.8 ENST00000373086.3 |
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| CDS-3UTR TCA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCGGAGTTCTGTGGCTGTaGAGGGACAGGGATGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: GPGKVRDLLKVAGGFLGIGVLWL*RDRDGR Trigger: TCTACCATCCCTGTCCCTTCACAGCCACAGAACTCC...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373083.8 |
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| CDS-3UTR TCA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCGGGTATCCAGGCTCCTaGGCTCCATCATGGTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: GPGKVRDLLKVAGGFLGIGYPGS*APSWFS Trigger: GGAAAACCATGATGGAGCTCAGGAGCCTGGATACCC...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373083.8 ENST00000373086.3 |
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| CDS-3UTR TCA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCAGGTCCGTGACCTGTTaGAGGTGGCAGGTGGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: GPGKVRDLLKVAGGFLGIRSVTC*RWQVAF Trigger: AAAAGCCACCTGCCACCTTCAACAGGTCACGGACCT...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373083.8 ENST00000373086.3 |
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| CDS-3UTR TCA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCAGCAGAGACCTCCCTTaGTGCTGCATGTGCCGATTC | + |
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Preference number: 4 (lower is better) Translates to: GPGKVRDLLKVAGGFLGISRDLP*CCMCRF Trigger: GAATCGGCACATGCAGCATCAAGGGAGGTCTCTGCT...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373083.8 ENST00000373086.3 |
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| CDS-3UTR CCA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCTTTCCTGTGCGCTCATaGGAGGGGACACCTGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: GPGKVRDLLKVAGGFLGIFPVRS*EGTPGE Trigger: TTCTCCAGGTGTCCCCTCCCATGAGCGCACAGGAAA...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373083.8 |
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| CDS-3UTR CCA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCACACAGCTCTGGGTCTaGGTCTGTGAAGAGACCAGG | + |
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Preference number: 4 (lower is better) Translates to: GPGKVRDLLKVAGGFLGITQLWV*VCEETR Trigger: CCTGGTCTCTTCACAGACCCAGACCCAGAGCTGTGT...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373083.8 ENST00000373086.3 |
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| CDS-3UTR CCA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCTGGCAGGTGGCTTTTTaGGTATCCAGGCTCCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: GPGKVRDLLKVAGGFLGIWQVAF*VSRLLS Trigger: GCTCAGGAGCCTGGATACCCAAAAAGCCACCTGCCA...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000373083.8 ENST00000373086.3 |
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| CDS-3UTR CCA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCTGGAGTTCTGTGGCCTaGAAGGCAGAGGGACAGGAA | + |
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Preference number: 4 (lower is better) Translates to: GPGKVRDLLKVAGGFLGIWSSVA*KAEGQE Trigger: TTCCTGTCCCTCTGCCTTCCAGGCCACAGAACTCCA...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373086.3 |
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| CDS-3UTR TCA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCCGTCTGATAGAAAAATaGGACAGGCTGAGGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: GPGKVRDLLKVAGGFLGIRLIEK*DRLRPG Trigger: CCCAGGCCTCAGCCTGTCTCATTTTTCTATCAGACG...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000373083.8 |
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| CDS-3UTR CCA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCGAAGTACCTGAGCCTTaGATTGTGCCTGAGAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: GPGKVRDLLKVAGGFLGIEVPEP*IVPESL Trigger: CAGGCTCTCAGGCACAATCCAAGGCTCAGGTACTTC...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373083.8 ENST00000373086.3 |
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| CDS-3UTR CCA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCGACAGGGATGGTAGATaGAGACTCAGGGGCTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: GPGKVRDLLKVAGGFLGIDRDGR*RLRGLS Trigger: AGACAAGCCCCTGAGTCTCCATCTACCATCCCTGTC...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373083.8 ENST00000373086.3 |
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| CDS-3UTR CCA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCGTTGAAGGTGGCAGGTaGCTTTTTGGGTATCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: GPGKVRDLLKVAGGFLGIVEGGR*LFGYPG Trigger: GCCTGGATACCCAAAAAGCCACCTGCCACCTTCAAC...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000373083.8 ENST00000373086.3 |
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| CDS-3UTR CCA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCTGTGGAGGCAGAGGCTaGAGATACCACCAGATAGAA | + |
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Preference number: 4 (lower is better) Translates to: GPGKVRDLLKVAGGFLGICGGRG*RYHQIE Trigger: TTCTATCTGGTGGTATCTCCAGCCTCTGCCTCCACA...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373083.8 ENST00000373086.3 |
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| CDS-3UTR TCA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCACACCAGTAATGTCCTaGGTCTTCCTCTCTCAGATC | + |
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Preference number: 4 (lower is better) Translates to: GPGKVRDLLKVAGGFLGITPVMS*VFLSQI Trigger: GATCTGAGAGAGGAAGACTCAGGACATTACTGGTGT...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373083.8 ENST00000373086.3 |
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| CDS CCA 90 bp | GGGGCTTGTCTGGCTCCTGCAGTGGGAGGCACACAGCTCTGGGTCTaGGTCTGTGAAGAGACCAGGTCGCGGGGAGTCCAGGAGGTCTGT | + |
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Preference number: 5 (lower is better) Translates to: GACLAPAVGGTQLWV*VCEETRSRGVQEVC Trigger: ACAGACCTCCTGGACTCCCCGCGACCTGGTCTCTTCACAGACCCAGACCCAGAGCTGTGTGCCTCCCACTGCAGGAGCCAGACAAGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000373083.8 ENST00000373086.3 ENST00000373089.10 |
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| CDS CCA 90 bp | GACTCAGGGGCTTGTCTGGCTCCTGCAGTGGGAGGCACACAGCTCTaGGTCTGGGTCTGTGAAGAGACCAGGTCGCGGGGAGTCCAGGAG | + |
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Preference number: 5 (lower is better) Translates to: DSGACLAPAVGGTQL*VWVCEETRSRGVQE Trigger: CTCCTGGACTCCCCGCGACCTGGTCTCTTCACAGACCCAGACCCAGAGCTGTGTGCCTCCCACTGCAGGAGCCAGACAAGCCCCTGAGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000373083.8 ENST00000373086.3 ENST00000373089.10 |
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| CDS CCA 90 bp | GTGGCTCAGTGGGAAGTGTCTATGGGCCTGGGGCCTGGGCTGAGCTaGGTGCAGCAGAGACCTCCCTTGATGCTGCATGTGCCGATTCCT | + |
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Preference number: 5 (lower is better) Translates to: VAQWEVSMGLGPGLS*VQQRPPLMLHVPIP Trigger: AGGAATCGGCACATGCAGCATCAAGGGAGGTCTCTGCTGCACCCAGCTCAGCCCAGGCCCCAGGCCCATAGACACTTCCCACTGAGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373083.8 ENST00000373086.3 |
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| CDS-3UTR CAA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCTGGAGACTCAGGGGCTaGTCTGGCTCCTGCAGTGGG | + |
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Preference number: 5 (lower is better) Translates to: GPGKVRDLLKVAGGFLGIWRLRG*SGSCSG Trigger: CCCACTGCAGGAGCCAGACAAGCCCCTGAGTCTCCA...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373083.8 ENST00000373086.3 |
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| CDS-3UTR CAA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCACTGGGGAGAGGGAATaGGGAGCTGGGCCTGATTCT | + |
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Preference number: 5 (lower is better) Translates to: GPGKVRDLLKVAGGFLGITGERE*GAGPDS Trigger: AGAATCAGGCCCAGCTCCCAATTCCCTCTCCCCAGT...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373083.8 |
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| CDS-3UTR CAA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCGTGGCAGGTGGCTTTTaGGGTATCCAGGCTCCTGAG | + |
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Preference number: 5 (lower is better) Translates to: GPGKVRDLLKVAGGFLGIVAGGF*GIQAPE Trigger: CTCAGGAGCCTGGATACCCAAAAAGCCACCTGCCAC...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373083.8 ENST00000373086.3 |
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| CDS-3UTR CAA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCTACCTGAGCCTTGGATaGTGCCTGAGAGCCTGGGAA | + |
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Preference number: 5 (lower is better) Translates to: GPGKVRDLLKVAGGFLGIYLSLG*CLRAWE Trigger: TTCCCAGGCTCTCAGGCACAATCCAAGGCTCAGGTA...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373083.8 ENST00000373086.3 |
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| CDS-3UTR CAA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCCTGCCCTGCCACACTTaGAAGTACCTGAGCCTTGGA | + |
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Preference number: 5 (lower is better) Translates to: GPGKVRDLLKVAGGFLGILPCHT*KYLSLG Trigger: TCCAAGGCTCAGGTACTTCAAAGTGTGGCAGGGCAG...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373083.8 ENST00000373086.3 |
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| CDS-3UTR CAA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCAAGGTCCGTGACCTGTaGAAGGTGGCAGGTGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: GPGKVRDLLKVAGGFLGIKVRDL*KVAGGF Trigger: AAAGCCACCTGCCACCTTCAACAGGTCACGGACCTT...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373083.8 ENST00000373086.3 |
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| CDS-3UTR CAA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTTGGGTATCCAGCAGAGACCTCCCTaGATGCTGCATGTGCCGATT | + |
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Preference number: 5 (lower is better) Translates to: GPGKVRDLLKVAGGFLGIQQRPP*MLHVPI Trigger: AATCGGCACATGCAGCATCAAGGGAGGTCTCTGCTG...GATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373083.8 ENST00000373086.3 |
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| CDS TCA 90 bp | GCTGGGCCTGATTCTGCTGCTCTTCCAGCACGTCTGATAGAAAAATaGGACAGGCTGAGGCCTGGGTTGGGGAGATGGGAGACTGCAAAG | + |
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Preference number: 5 (lower is better) Translates to: AGPDSAALPARLIEK*DRLRPGLGRWETAK Trigger: CTTTGCAGTCTCCCATCTCCCCAACCCAGGCCTCAGCCTGTCTCATTTTTCTATCAGACGTGCTGGAAGAGCAGCAGAATCAGGCCCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373083.8 ENST00000373089.10 |
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| CDS CAA 90 bp | GGTCCAGGGAAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTaGGGTATCCAGGCTCCTGAGCTCCATCATGGTTTTCCACCATAT | + |
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Preference number: 6 (lower is better) Translates to: GPGKVRDLLKVAGGF*GIQAPELHHGFPPY Trigger: ATATGGTGGAAAACCATGATGGAGCTCAGGAGCCTGGATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTTCCCTGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000373083.8 ENST00000373086.3 ENST00000373089.10 |
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| CDS CAA 72 bp | ATTGTGAATCGAGAGGTCCAAGCCATCGTCCTGGGCTaGGAGCTGGTGACTAACCTGATGCACACAAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: IVNREVQAIVLG*ELVTNLMHTSA Trigger: AGCACTTGTGTGCATCAGGTTAGTCACCAGCTCCAAGCCCAGGACGATGGCTTGGACCTCTCGATTCACAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373083.8 ENST00000373086.3 ENST00000373089.10 |
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| CDS CAA 72 bp | AAGGTCCGTGACCTGTTGAAGGTGGCAGGTGGCTTTTaGGGTATCCAGGCTCCTGAGCTCCATCATGGTTTT | + |
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Preference number: 6 (lower is better) Translates to: KVRDLLKVAGGF*GIQAPELHHGF Trigger: AAAACCATGATGGAGCTCAGGAGCCTGGATACCCAAAAAGCCACCTGCCACCTTCAACAGGTCACGGACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000373083.8 ENST00000373086.3 ENST00000373089.10 |
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| CDS TCA 72 bp | GTCAGAAGGGCGGTAGATTCTACACCAGTAATGTCCTaGGTCTTCCTCTCTCAGATCAGTCATGGTGACAGT | + |
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Preference number: 6 (lower is better) Translates to: VRRAVDSTPVMS*VFLSQISHGDS Trigger: ACTGTCACCATGACTGATCTGAGAGAGGAAGACTCAGGACATTACTGGTGTAGAATCTACCGCCCTTCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373083.8 ENST00000373086.3 ENST00000373089.10 |
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