RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NCOR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000141027

Ensembl transcript IDs: ENST00000268712.8, ENST00000395848.5, ENST00000395849.6, ENST00000395851.5, ENST00000395857.7, ENST00000411510.5, ENST00000430577.2, ENST00000436068.1, ENST00000436828.5, ENST00000458113.6, ENST00000460276.5, ENST00000464381.5, ENST00000470782.5, ENST00000472189.1, ENST00000579573.2, ENST00000579606.1, ENST00000580554.1, ENST00000580617.5, ENST00000582357.5, ENST00000582565.1, ENST00000583226.1, ENST00000583234.1, ENST00000584872.1, ENST00000585296.1

Found 1425 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCAGCCCTTCTGGCAGCGGGTGCACTAAAGGCAAAACCGCAGCACTaGCACGCTGAAAATGAGAATCAGAAACCTGTTCCAGACGTGGTC +
Preference number: 1 (lower is better)
Translates to: SALLAAGALKAKPQH*HAENENQKPVPDVV
Trigger: GACCACGTCTGGAACAGGTTTCTGATTCTCATTTTCAGCGTGTCAGTGCTGCGGTTTTGCCTTTAGTGCACCCGCTGCCAGAAGGGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460276.5
3UTR TCA 90 bp ATGAGAATCAGAAACCTGTTCCAGACGTGGTCGCTTCGATTCCAGTaGATCATGATCCACTGGGGATGGGCCTGGATGAAACGGTTCATA +
Preference number: 1 (lower is better)
Translates to: MRIRNLFQTWSLRFQ*IMIHWGWAWMKRFI
Trigger: TATGAACCGTTTCATCCAGGCCCATCCCCAGTGGATCATGATTCACTGGAATCGAAGCGACCACGTCTGGAACAGGTTTCTGATTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460276.5
3UTR GCA 90 bp CGTCTTTGTTCTGCATCAAACATCATAGGTGGAATCACAGAGAGCTaGCGCATTTGTTTCTCATTATTCTCCTGCTCAGAGAGCCCATCA +
Preference number: 1 (lower is better)
Translates to: RLCSASNIIGGITES*RICFSLFSCSESPS
Trigger: TGATGGGCTCTCTGAGCAGGAGAATAATGAGAAACAAATGCGGCAGCTCTCTGTGATTCCACCTATGATGTTTGATGCAGAACAAAGACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460276.5
3UTR GCA 90 bp CTGAGATTTCTTCTCCAGGTGATGGTAAATAAAGTAATACGCACATaGATTATGATGAGGATGGAGGGAGTGGTTCACAGCACCTCACCT +
Preference number: 1 (lower is better)
Translates to: LRFLLQVMVNKVIRT*IMMRMEGVVHSTSP
Trigger: AGGTGAGGTGCTGTGAACCACTCCCTCCATCCTCATCATAATGCATGTGCGTATTACTTTATTTACCATCACCTGGAGAAGAAATCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268712.8
3UTR TCA 90 bp AAGAAGTTAGGCTCTGATCTGACATGTTCTCAGAAACTATACGGTTaGCCTTCAAATAATGCAGGAGTTAGGGGCATAGACCCCCTAAGT +
Preference number: 1 (lower is better)
Translates to: KKLGSDLTCSQKLYG*PSNNAGVRGIDPLS
Trigger: ACTTAGGGGGTCTATGCCCCTAACTCCTGCATTATTTGAAGGTCAACCGTATAGTTTCTGAGAACATGTCAGATCAGAGCCTAACTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268712.8
3UTR GCA 90 bp CTCCATAAGCCCATTCATGTTAATGAACTTGACTCGTCTTTGTTCTaGATCAAACATCATAGGTGGAATCACAGAGAGCTGCCGCATTTG +
Preference number: 1 (lower is better)
Translates to: LHKPIHVNELDSSLF*IKHHRWNHRELPHL
Trigger: CAAATGCGGCAGCTCTCTGTGATTCCACCTATGATGTTTGATGCAGAACAAAGACGAGTCAAGTTCATTAACATGAATGGGCTTATGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460276.5
3UTR CCA 90 bp GTTAATGAACTTGACTCGTCTTTGTTCTGCATCAAACATCATAGGTaGAATCACAGAGAGCTGCCGCATTTGTTTCTCATTATTCTCCTG +
Preference number: 1 (lower is better)
Translates to: VNELDSSLFCIKHHR*NHRELPHLFLIILL
Trigger: CAGGAGAATAATGAGAAACAAATGCGGCAGCTCTCTGTGATTCCACCTATGATGTTTGATGCAGAACAAAGACGAGTCAAGTTCATTAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460276.5
3UTR CCA 90 bp AGTGTCAGAACACTGAAATCTAAGTCTACAAAGAATATCATGTTTTaGTTTGCAGTGAACCACAGTAAGTTGTCAGTGCTGCTCTGTGCT +
Preference number: 1 (lower is better)
Translates to: SVRTLKSKSTKNIMF*FAVNHSKLSVLLCA
Trigger: AGCACAGAGCAGCACTGACAACTTACTGTGGTTCACTGCAAACCAAAACATGATATTCTTTGTAGACTTAGATTTCAGTGTTCTGACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268712.8
3UTR-3UTR CCA 90 bp GAGGATGGAGGGAGTGGTTCACAGCACCTCACCTTCGGGTCCTCAGGTAGAACTGAATACTTAGGGGCATaGTTAAATTACCAGTGTGCG +
Preference number: 2 (lower is better)
Translates to: EDGGSGSQHLTFGSSGRTEYLGA*LNYQCA
Trigger: CGCACACTGGTAATTTAACCATGCCCCTAAGTATTC...AGTTCTACCTGAGGACCCGAAGGTGAGGTGCTGTGAACCACTCCCTCCATCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268712.8
3UTR-3UTR TCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATGTGGGCTGGCTCTCCTaGAAAGTCTCAGGGAATAAG +
Preference number: 2 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNVGWLS*KVSGNK
Trigger: CTTATTCCCTGAGACTTTTCAGGAGAGCCAGCCCAC...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
3UTR CAA 90 bp CAAGTACTAGGAATGCTGACCACTAAGCCTGATCTAAAGTTTATGTaGGGGACCTCAGGTATACAGGAGTGGAACAGGGACAGGAGTGAA +
Preference number: 2 (lower is better)
Translates to: QVLGMLTTKPDLKFM*GTSGIQEWNRDRSE
Trigger: TTCACTCCTGTCCCTGTTCCACTCCTGTATACCTGAGGTCCCCAACATAAACTTTAGATCAGGCTTAGTGGTCAGCATTCCTAGTACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
3UTR-3UTR CCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACTGTAAGCTTTTCCTTTaGAACCTGAGACACCAGGAG +
Preference number: 2 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHCKLFL*NLRHQE
Trigger: CTCCTGGTGTCTCAGGTTCCAAAGGAAAAGCTTACA...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
3UTR-3UTR CCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACGTGATAGGAGGGTCTTaGTCAGTAGCTAATCACAGA +
Preference number: 2 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHVIGGS*SVANHR
Trigger: TCTGTGATTAGCTACTGACCAAGACCCTCCTATCAC...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
3UTR CAA 90 bp TGGAAGTGGATCATCATGAAGGTCTTCATCCTTGTCATCTTCATGTaGAATAGGCTGAGGATGAGAAGGGGTTGGTCTTGCTATCTTGGG +
Preference number: 2 (lower is better)
Translates to: WKWIIMKVFILVIFM*NRLRMRRGWSCYLG
Trigger: CCCAAGATAGCAAGACCAACCCCTTCTCATCCTCAGCCTATTCAACATGAAGATGACAAGGATGAAGACCTTCATGATGATCCACTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
3UTR-3UTR TCA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGTGGGCTGGCTCTCCTaGAAAGTCTCAGGGAATAAG +
Preference number: 2 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVIVGWLS*KVSGNK
Trigger: CTTATTCCCTGAGACTTTTCAGGAGAGCCAGCCCAC...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
3UTR-3UTR TCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCGTGGGCTGGCTCTCCTaGAAAGTCTCAGGGAATAAG +
Preference number: 2 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIVGWLS*KVSGNK
Trigger: CTTATTCCCTGAGACTTTTCAGGAGAGCCAGCCCAC...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
3UTR-3UTR TCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACAAAGTACAATGCCCGTaGCAGCCAACATTATGTAAC +
Preference number: 2 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHKVQCP*QPTLCN
Trigger: GTTACATAATGTTGGCTGTCACGGGCATTGTACTTT...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
3UTR CAA 90 bp CTCTTCTTTTTCTTCTACTTTTTCTTCTTGCGAGGGTCGAGCAATTaGCTGGTTTCTGCCTCTGCGTTTCCCATAATTCCTTCTGACGAG +
Preference number: 2 (lower is better)
Translates to: LFFFFYFFFLRGSSN*LVSASAFPIIPSDE
Trigger: CTCGTCAGAAGGAATTATGGGAAACGCAGAGGCAGAAACCAGCAAATTGCTCGACCCTCGCAAGAAGAAAAAGTAGAAGAAAAAGAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000460276.5
3UTR-3UTR TCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCAAAGTACAATGCCCGTaGCAGCCAACATTATGTAAC +
Preference number: 2 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAKVQCP*QPTLCN
Trigger: GTTACATAATGTTGGCTGTCACGGGCATTGTACTTT...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
3UTR-3UTR TCA 90 bp ATCTCCTTTTCATGGTCAGTCCAAACATTCATAAACTGCCTATCTTTATACACTCCTAGCAATGGTGGCTaGAAGACCAGCTCCCCTCTG +
Preference number: 2 (lower is better)
Translates to: ISFSWSVQTFINCLSLYTPSNGG*KTSSPL
Trigger: CAGAGGGGAGCTGGTCTTTCAGCCACCATTGCTAGG...AGTGTATAAAGATAGGCAGTTTATGAATGTTTGGACTGACCATGAAAAGGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460276.5
3UTR-3UTR GCA 90 bp TTCCTCATCACCTGGTTTGTCTTGATGTTCTCATGGTACACCTTGGTATCTGATCTCAGGAGGTTTAGCTaGCTCTTCTTCAAGCTGTTG +
Preference number: 2 (lower is better)
Translates to: FLITWFVLMFSWYTLVSDLRRFS*LFFKLL
Trigger: CAACAGCTTGAAGAAGAGGCAGCTAAACCTCCTGAG...ATCAGATACCAAGGTGTACCATGAGAACATCAAGACAAACCAGGTGATGAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460276.5
3UTR-3UTR GCA 90 bp ATAAGCCCATTCATGTTAATGAACTTGACTCGTCTTTGTTCTGCATCAAACATCATACTGCGGTGTTTCTaGTCCACAGGAGGAGGGGAC +
Preference number: 2 (lower is better)
Translates to: ISPFMLMNLTRLCSASNIILRCF*STGGGD
Trigger: GTCCCCTCCTCCTGTGGAGCAGAAACACCGCAGTAT...GATGTTTGATGCAGAACAAAGACGAGTCAAGTTCATTAACATGAATGGGCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460276.5
3UTR-3UTR GCA 90 bp ATCTCCTTTTCATGGTCAGTCCAAACATTCATAAACTGCCTATCTTTATACACTCCTTCTGGCAGCGGGTaGACTAAAGGCAAAACCGCA +
Preference number: 2 (lower is better)
Translates to: ISFSWSVQTFINCLSLYTPSGSG*TKGKTA
Trigger: TGCGGTTTTGCCTTTAGTGCACCCGCTGCCAGAAGG...AGTGTATAAAGATAGGCAGTTTATGAATGTTTGGACTGACCATGAAAAGGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460276.5
3UTR-3UTR TCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGCCAAAGTTGATGCGCTaGTTTGAACATAAGTACACC +
Preference number: 2 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRPKLMR*FEHKYT
Trigger: GGTGTACTTATGTTCAAATCAGCGCATCAACTTTGG...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
3UTR-3UTR TCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGAATCACCCCCAAAGTTaGTGCGCTGATTTGAACATA +
Preference number: 2 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRNHPQS*CADLNI
Trigger: TATGTTCAAATCAGCGCATCAACTTTGGGGGTGATT...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
3UTR-3UTR TCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGAAAGTACAATGCCCGTaGCAGCCAACATTATGTAAC +
Preference number: 2 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRKVQCP*QPTLCN
Trigger: GTTACATAATGTTGGCTGTCACGGGCATTGTACTTT...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
3UTR-3UTR GCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTATAGTCCACTGAATTaGCTGTATCAAAGGCAGTTT +
Preference number: 2 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAYSPLN*LYQRQF
Trigger: AAACTGCCTTTGATACAGGCAATTCAGTGGACTATA...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
3UTR-3UTR CCA 90 bp ATCTCCTTTTCATGGTCAGTCCAAACATTCATAAACTGCCTATCTTTATACACTATGATCCACTGGGGATaGGCCTGGATGAAACGGTTC +
Preference number: 2 (lower is better)
Translates to: ISFSWSVQTFINCLSLYTMIHWG*AWMKRF
Trigger: GAACCGTTTCATCCAGGCCCATCCCCAGTGGATCAT...AGTGTATAAAGATAGGCAGTTTATGAATGTTTGGACTGACCATGAAAAGGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460276.5
3UTR CAA 90 bp ATTAATTTTAAATCATCCACAGTGACTCAGCTCATGGTCTCGTTGTaGGAAACACTAGGAGTTTTCAGGACAGTCTCTTCATGTGGGTGT +
Preference number: 2 (lower is better)
Translates to: INFKSSTVTQLMVSL*ETLGVFRTVSSCGC
Trigger: ACACCCACATGAAGAGACTGTCCTGAAAACTCCTAGTGTTTCCAACAACGAGACCATGAGCTGAGTCACTGTGGATGATTTAAAATTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268712.8
3UTR-3UTR TCA 90 bp ATAAGCCCATTCATGTTAATGAACTTGACTCGTCTTTGTTCTGCATCAAACATCGCAAAACCGCAGCACTaGCACGCTGAAAATGAGAAT +
Preference number: 2 (lower is better)
Translates to: ISPFMLMNLTRLCSASNIAKPQH*HAENEN
Trigger: ATTCTCATTTTCAGCGTGTCAGTGCTGCGGTTTTGC...GATGTTTGATGCAGAACAAAGACGAGTCAAGTTCATTAACATGAATGGGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460276.5
3UTR CAA 90 bp TTTATTAATTTTAAATCATCCACAGTGACTCAGCTCATGGTCTCGTaGTTGGAAACACTAGGAGTTTTCAGGACAGTCTCTTCATGTGGG +
Preference number: 2 (lower is better)
Translates to: FINFKSSTVTQLMVS*LETLGVFRTVSSCG
Trigger: CCCACATGAAGAGACTGTCCTGAAAACTCCTAGTGTTTCCAACAACGAGACCATGAGCTGAGTCACTGTGGATGATTTAAAATTAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268712.8
3UTR CAA 90 bp TACACTTTCATAGGGTCCTCCATAAGCCCATTCATGTTAATGAACTaGACTCGTCTTTGTTCTGCATCAAACATCATAGGTGGAATCACA +
Preference number: 2 (lower is better)
Translates to: YTFIGSSISPFMLMN*TRLCSASNIIGGIT
Trigger: TGTGATTCCACCTATGATGTTTGATGCAGAACAAAGACGAGTCAAGTTCATTAACATGAATGGGCTTATGGAGGACCCTATGAAAGTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460276.5
3UTR-3UTR TCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGATTATTATAGTCCACTaGATTGCCTGTATCAAAGGC +
Preference number: 2 (lower is better)
Translates to: CADLNISTPDTTARGYTLIIIVH*IACIKG
Trigger: GCCTTTGATACAGGCAATTCAGTGGACTATAATAAT...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
3UTR CAA 90 bp TCTACAAAGAATATCATGTTTTGGTTTGCAGTGAACCACAGTAAGTaGTCAGTGCTGCTCTGTGCTTACCACTTAAATCATGATAAGGTG +
Preference number: 2 (lower is better)
Translates to: STKNIMFWFAVNHSK*SVLLCAYHLNHDKV
Trigger: CACCTTATCATGATTTAAGTGGTAAGCACAGAGCAGCACTGACAACTTACTGTGGTTCACTGCAAACCAAAACATGATATTCTTTGTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268712.8
3UTR-3UTR TCA 90 bp GGAGGACTGATCTCCTTTACTGATTGGTCTAAATTCAAAAGTGAATTGGTTAAAGGAAGTGGATCATCATaGAGGTCTTCATCCTTGTCA +
Preference number: 2 (lower is better)
Translates to: GGLISFTDWSKFKSELVKGSGSS*RSSSLS
Trigger: TGACAAGGATGAAGACCTTCATGATGATCCACTTCC...TTTAACCAATTCACTTTTGAATTTAGACCAATCAGTAAAGGAGATCAGTCCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268712.8
3UTR-3UTR GCA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAAGTTAAATTACCAGTGTaGGTAACAGTGAGGTATGCC +
Preference number: 2 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIEVKLPV*VTVRYA
Trigger: GGCATACCTCACTGTTACGCACACTGGTAATTTAAC...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
3UTR-3UTR GCA 90 bp GGAGGACTGATCTCCTTTACTGATTGGTCTAAATTCAAAAGTGAATTGGTTAAACAAAGTGAGAGTAAATaGTGGTCCATAGTGATGGGG +
Preference number: 2 (lower is better)
Translates to: GGLISFTDWSKFKSELVKQSESK*WSIVMG
Trigger: CCCCATCACTATGGACCAGCATTTACTCTCACTTTG...TTTAACCAATTCACTTTTGAATTTAGACCAATCAGTAAAGGAGATCAGTCCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268712.8
3UTR-3UTR CCA 90 bp ATAAACATGCAGTGGAAAACTGGCTGTCAGAATACTTTTATGAAGAGTATTAGGGTGATAGGAGGGTCTTaGTCAGTAGCTAATCACAGA +
Preference number: 2 (lower is better)
Translates to: INMQWKTGCQNTFMKSIRVIGGS*SVANHR
Trigger: TCTGTGATTAGCTACTGACCAAGACCCTCCTATCAC...CCTAATACTCTTCATAAAAGTATTCTGACAGCCAGTTTTCCACTGCATGTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268712.8
3UTR-3UTR TCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGATTATTATAGTCCACTaGATTGCCTGTATCAAAGGC +
Preference number: 2 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRIIIVH*IACIKG
Trigger: GCCTTTGATACAGGCAATTCAGTGGACTATAATAAT...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
3UTR-3UTR GCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTATATAGTCCACTGAATTaGCTGTATCAAAGGCAGTTT +
Preference number: 2 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLYSPLN*LYQRQF
Trigger: AAACTGCCTTTGATACAGGCAATTCAGTGGACTATA...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
3UTR-3UTR GCA 90 bp ATCTCCTTTTCATGGTCAGTCCAAACATTCATAAACTGCCTATCTTTATACACTGACTCGTCTTTGTTCTaGATCAAACATCATAGGTGG +
Preference number: 2 (lower is better)
Translates to: ISFSWSVQTFINCLSLYTDSSLF*IKHHRW
Trigger: CCACCTATGATGTTTGATGCAGAACAAAGACGAGTC...AGTGTATAAAGATAGGCAGTTTATGAATGTTTGGACTGACCATGAAAAGGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460276.5
3UTR-3UTR CCA 90 bp GGAGGACTGATCTCCTTTACTGATTGGTCTAAATTCAAAAGTGAATTGGTTAAACTTTCCAGTTACCAGTaGCATTCTCCCAAAACTGTT +
Preference number: 2 (lower is better)
Translates to: GGLISFTDWSKFKSELVKLSSYQ*HSPKTV
Trigger: AACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG...TTTAACCAATTCACTTTTGAATTTAGACCAATCAGTAAAGGAGATCAGTCCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268712.8
3UTR-3UTR CCA 90 bp GGAGGACTGATCTCCTTTACTGATTGGTCTAAATTCAAAAGTGAATTGGTTAAACTGTCCAATGGTCACTaGAGTTTTCTGGGCATAAAT +
Preference number: 2 (lower is better)
Translates to: GGLISFTDWSKFKSELVKLSNGH*SFLGIN
Trigger: ATTTATGCCCAGAAAACTCCAGTGACCATTGGACAG...TTTAACCAATTCACTTTTGAATTTAGACCAATCAGTAAAGGAGATCAGTCCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268712.8
3UTR-3UTR CCA 90 bp ATAAGCCCATTCATGTTAATGAACTTGACTCGTCTTTGTTCTGCATCAAACATCTGGCAGTTCAACTTTTaGGCCAAGACCTTCAAAAAT +
Preference number: 2 (lower is better)
Translates to: ISPFMLMNLTRLCSASNIWQFNF*AKTFKN
Trigger: ATTTTTGAAGGTCTTGGCCCAAAAGTTGAACTGCCA...GATGTTTGATGCAGAACAAAGACGAGTCAAGTTCATTAACATGAATGGGCTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460276.5
3UTR-3UTR GCA 90 bp ATCTCCTTTTCATGGTCAGTCCAAACATTCATAAACTGCCTATCTTTATACACTTTCTCATTATTCTCCTaGTCAGAGAGCCCATCAATA +
Preference number: 2 (lower is better)
Translates to: ISFSWSVQTFINCLSLYTFSLFS*SESPSI
Trigger: TATTGATGGGCTCTCTGAGCAGGAGAATAATGAGAA...AGTGTATAAAGATAGGCAGTTTATGAATGTTTGGACTGACCATGAAAAGGAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460276.5
3UTR-3UTR CCA 90 bp GGAGGACTGATCTCCTTTACTGATTGGTCTAAATTCAAAAGTGAATTGGTTAAAAAATCCATGTATAAGTaGACCCACACAGTTCAAACC +
Preference number: 2 (lower is better)
Translates to: GGLISFTDWSKFKSELVKKSMYK*THTVQT
Trigger: GGTTTGAACTGTGTGGGTCCACTTATACATGGATTT...TTTAACCAATTCACTTTTGAATTTAGACCAATCAGTAAAGGAGATCAGTCCTCC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268712.8
3UTR-3UTR CCA 90 bp GGAGGACTGATCTCCTTTACTGATTGGTCTAAATTCAAAAGTGAATTGGTTAAATTTTTAACTGTCCAATaGTCACTGGAGTTTTCTGGG +
Preference number: 2 (lower is better)
Translates to: GGLISFTDWSKFKSELVKFLTVQ*SLEFSG
Trigger: CCCAGAAAACTCCAGTGACCATTGGACAGTTAAAAA...TTTAACCAATTCACTTTTGAATTTAGACCAATCAGTAAAGGAGATCAGTCCTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268712.8
3UTR-3UTR CCA 90 bp ATCTCCTTTTCATGGTCAGTCCAAACATTCATAAACTGCCTATCTTTATACACTGTCTTGATGTTCTCATaGTACACCTTGGTATCTGAT +
Preference number: 2 (lower is better)
Translates to: ISFSWSVQTFINCLSLYTVLMFS*YTLVSD
Trigger: ATCAGATACCAAGGTGTACCATGAGAACATCAAGAC...AGTGTATAAAGATAGGCAGTTTATGAATGTTTGGACTGACCATGAAAAGGAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460276.5
3UTR-3UTR GCA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATCAAGGGGATATACACTaGAAAAAGGTCATCTATTTA +
Preference number: 2 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNQGDIH*KKVIYL
Trigger: TAAATAGATGACCTTTTTGCAGTGTATATCCCCTTG...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
3UTR TCA 72 bp TCCATCATTTCTTCATCATCTGTGGGCTGGCTCTCCTaGAAAGTCTCAGGGAATAAGTCACAGGAGGGCAGG +
Preference number: 3 (lower is better)
Translates to: SIISSSSVGWLS*KVSGNKSQEGR
Trigger: CCTGCCCTCCTGTGACTTATTCCCTGAGACTTTTCAGGAGAGCCAGCCCACAGATGATGAAGAAATGATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
3UTR TCA 72 bp CAGGAGTGGAACAGGGACAGGAGTGAAAGCTTTGACTaGAGACAAATGTGGGCTTATGGCCTATCTCTGTCA +
Preference number: 3 (lower is better)
Translates to: QEWNRDRSESFD*RQMWAYGLSLS
Trigger: TGACAGAGATAGGCCATAAGCCCACATTTGTCTTCAGTCAAAGCTTTCACTCCTGTCCCTGTTCCACTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
3UTR GCA 72 bp ATGTTGAATAGGCTGAGGATGAGAAGGGGTTGGTCTTaGTATCTTGGGTGGCAGAGGTGGAAGAAAATCCAT +
Preference number: 3 (lower is better)
Translates to: MLNRLRMRRGWS*YLGWQRWKKIH
Trigger: ATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAGACCAACCCCTTCTCATCCTCAGCCTATTCAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
3UTR CCA 72 bp ACTCTTGTCCCAAGGGAGCAAAGTGAGAGTAAATGCTaGTCCATAGTGATGGGGAAAAAGGACTGTGTTCAC +
Preference number: 3 (lower is better)
Translates to: TLVPREQSESKC*SIVMGKKDCVH
Trigger: GTGAACACAGTCCTTTTTCCCCATCACTATGGACCAGCATTTACTCTCACTTTGCTCCCTTGGGACAAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
3UTR-3UTR CAA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACTTCAAAACAAAAGCTTaGTTGGGCTGCATCAAATGC +
Preference number: 3 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHFKTKA*LGCIKC
Trigger: GCATTTGATGCAGCCCAACAAAGCTTTTGTTTTGAA...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
3UTR TCA 72 bp GGCTCTGATCTGACATGTTCTCAGAAACTATACGGTTaGCCTTCAAATAATGCAGGAGTTAGGGGCATAGAC +
Preference number: 3 (lower is better)
Translates to: GSDLTCSQKLYG*PSNNAGVRGID
Trigger: GTCTATGCCCCTAACTCCTGCATTATTTGAAGGTCAACCGTATAGTTTCTGAGAACATGTCAGATCAGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268712.8
3UTR GCA 72 bp CTTCTCCAGGTGATGGTAAATAAAGTAATACGCACATaGATTATGATGAGGATGGAGGGAGTGGTTCACAGC +
Preference number: 3 (lower is better)
Translates to: LLQVMVNKVIRT*IMMRMEGVVHS
Trigger: GCTGTGAACCACTCCCTCCATCCTCATCATAATGCATGTGCGTATTACTTTATTTACCATCACCTGGAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268712.8
3UTR-3UTR CAA 90 bp TTCCTCATCACCTGGTTTGTCTTGATGTTCTCATGGTACACCTTGGTATCTGATGTGGCAGTTCAACTTTaGGGCCAAGACCTTCAAAAA +
Preference number: 3 (lower is better)
Translates to: FLITWFVLMFSWYTLVSDVAVQL*GQDLQK
Trigger: TTTTTGAAGGTCTTGGCCCAAAAGTTGAACTGCCAC...ATCAGATACCAAGGTGTACCATGAGAACATCAAGACAAACCAGGTGATGAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460276.5
3UTR GCA 72 bp GCTTTATCCTCTTCTTTTTCTTCTACTTTTTCTTCTTaGGAGGGTCGAGCAATTTGCTGGTTTCTGCCTCTG +
Preference number: 3 (lower is better)
Translates to: ALSSSFSSTFSS*EGRAICWFLPL
Trigger: CAGAGGCAGAAACCAGCAAATTGCTCGACCCTCGCAAGAAGAAAAAGTAGAAGAAAAAGAAGAGGATAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000460276.5
3UTR GCA 72 bp CCCATTCATGTTAATGAACTTGACTCGTCTTTGTTCTaGATCAAACATCATAGGTGGAATCACAGAGAGCTG +
Preference number: 3 (lower is better)
Translates to: PIHVNELDSSLF*IKHHRWNHREL
Trigger: CAGCTCTCTGTGATTCCACCTATGATGTTTGATGCAGAACAAAGACGAGTCAAGTTCATTAACATGAATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460276.5
3UTR-3UTR CAA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATATTTAACAGTAAACTCTaGTCCCAAGGGAGCAAAGTG +
Preference number: 3 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVIFNSKL*SQGSKV
Trigger: CACTTTGCTCCCTTGGGACAAGAGTTTACTGTTAAA...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
3UTR-3UTR CAA 90 bp ATAAGCCCATTCATGTTAATGAACTTGACTCGTCTTTGTTCTGCATCAAACATCATCACCTGGTTTGTCTaGATGTTCTCATGGTACACC +
Preference number: 3 (lower is better)
Translates to: ISPFMLMNLTRLCSASNIITWFV*MFSWYT
Trigger: GGTGTACCATGAGAACATCAAGACAAACCAGGTGAT...GATGTTTGATGCAGAACAAAGACGAGTCAAGTTCATTAACATGAATGGGCTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460276.5
3UTR GCA 72 bp AAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTaGGTAACAGTGAGGTATGCCTCAAATAAGCCTTTA +
Preference number: 3 (lower is better)
Translates to: KGILRGMVKLPV*VTVRYASNKPL
Trigger: TAAAGGCTTATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
3UTR-3UTR CAA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATAAAACAAAAGCTTTGTaGGGCTGCATCAAATGCAGG +
Preference number: 3 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNKTKAL*GCIKCR
Trigger: CCTGCATTTGATGCAGCCCAACAAAGCTTTTGTTTT...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
3UTR-3UTR CAA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAATTTAACAGTAAACTCTaGTCCCAAGGGAGCAAAGTG +
Preference number: 3 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIEFNSKL*SQGSKV
Trigger: CACTTTGCTCCCTTGGGACAAGAGTTTACTGTTAAA...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
3UTR-3UTR CAA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAACAATGGACACTGCTTTaGGGTTTAGCTTTATTTCCC +
Preference number: 3 (lower is better)
Translates to: TVSVRTNIIISWEADNLQQWTLL*GLALFP
Trigger: GGGAAATAAAGCTAAACCCAAAAGCAGTGTCCATTG...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
3UTR TCA 72 bp CTAAGGGAAAAATATGTAAGCTTTTCCTTTGGAACCTaGGACACCAGGAGCCTTAAACCACAAATAATCTAC +
Preference number: 3 (lower is better)
Translates to: LREKYVSFSFGT*DTRSLKPQIIY
Trigger: GTAGATTATTTGTGGTTTAAGGCTCCTGGTGTCTCAGGTTCCAAAGGAAAAGCTTACATATTTTTCCCTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp GAGGATGGAGGGAGTGGTTCACAGCACCTCACCTTCGGGTCCTCAGGTAGAACTCTCTTCAGTAGCCGCTaGGGCTGCAGCACTGGCAGC +
Preference number: 4 (lower is better)
Translates to: EDGGSGSQHLTFGSSGRTLFSSR*GCSTGS
Trigger: GCTGCCAGTGCTGCAGCCGCAGCGGCTACTGAAGAG...AGTTCTACCTGAGGACCCGAAGGTGAGGTGCTGTGAACCACTCCCTCCATCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR TCA 90 bp GAGGATGGAGGGAGTGGTTCACAGCACCTCACCTTCGGGTCCTCAGGTAGAACTCACTGTGGTTTTGGATaGCGGGATGAGAGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: EDGGSGSQHLTFGSSGRTHCGFG*RDERGR
Trigger: CCGCCCCCTCTCATCCCGTCATCCAAAACCACAGTG...AGTTCTACCTGAGGACCCGAAGGTGAGGTGCTGTGAACCACTCCCTCCATCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR TCA 90 bp GAGGATGGAGGGAGTGGTTCACAGCACCTCACCTTCGGGTCCTCAGGTAGAACTACTGGAATCATTGTCTaGCTGGGGCTCGGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: EDGGSGSQHLTFGSSGRTTGIIV*LGLGPL
Trigger: CAAAGGCCCGAGCCCCAGTCAGACAATGATTCCAGT...AGTTCTACCTGAGGACCCGAAGGTGAGGTGCTGTGAACCACTCCCTCCATCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR TCA 90 bp GAGGATGGAGGGAGTGGTTCACAGCACCTCACCTTCGGGTCCTCAGGTAGAACTCAGACCCTCAGGTTGTaGGTTTTGGCTTCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: EDGGSGSQHLTFGSSGRTQTLRL*VLASGR
Trigger: TCTCCCCGAAGCCAAAACTCACAACCTGAGGGTCTG...AGTTCTACCTGAGGACCCGAAGGTGAGGTGCTGTGAACCACTCCCTCCATCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR TCA 90 bp GAGGATGGAGGGAGTGGTTCACAGCACCTCACCTTCGGGTCCTCAGGTAGAACTGGATCCAAAGCCCTGTaGAAAGGCATGGCTGGATCC +
Preference number: 4 (lower is better)
Translates to: EDGGSGSQHLTFGSSGRTGSKAL*KGMAGS
Trigger: GGATCCAGCCATGCCTTTTCACAGGGCTTTGGATCC...AGTTCTACCTGAGGACCCGAAGGTGAGGTGCTGTGAACCACTCCCTCCATCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR TCA 90 bp GAGGATGGAGGGAGTGGTTCACAGCACCTCACCTTCGGGTCCTCAGGTAGAACTCAGCAGGCAGTGGCATaGTTCGTAGCTGAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: EDGGSGSQHLTFGSSGRTQQAVA*FVAEQL
Trigger: CAACTGCTCAGCTACGAATCATGCCACTGCCTGCTG...AGTTCTACCTGAGGACCCGAAGGTGAGGTGCTGTGAACCACTCCCTCCATCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR TCA 90 bp GAGGATGGAGGGAGTGGTTCACAGCACCTCACCTTCGGGTCCTCAGGTAGAACTCAAACTCCTCCTGAATaGGGTGATGGGTCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: EDGGSGSQHLTFGSSGRTQTPPE*GDGSPS
Trigger: GGAAGGGGACCCATCACCTCATTCAGGAGGAGTTTG...AGTTCTACCTGAGGACCCGAAGGTGAGGTGCTGTGAACCACTCCCTCCATCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR GCA 90 bp GAGGATGGAGGGAGTGGTTCACAGCACCTCACCTTCGGGTCCTCAGGTAGAACTCCCCGGGGTGTGGCTTaGTCTCTTTCCTCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: EDGGSGSQHLTFGSSGRTPRGVA*SLSSVS
Trigger: AGAAACTGAGGAAAGAGAGCAAGCCACACCCCGGGG...AGTTCTACCTGAGGACCCGAAGGTGAGGTGCTGTGAACCACTCCCTCCATCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR GCA 90 bp GAGGATGGAGGGAGTGGTTCACAGCACCTCACCTTCGGGTCCTCAGGTAGAACTCGCAGAGGGAGCACATaGAATCGGTGTTGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: EDGGSGSQHLTFGSSGRTRRGST*NRCWWS
Trigger: ACTCCACCAACACCGATTGCATGTGCTCCCTCTGCG...AGTTCTACCTGAGGACCCGAAGGTGAGGTGCTGTGAACCACTCCCTCCATCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR GCA 90 bp GAGGATGGAGGGAGTGGTTCACAGCACCTCACCTTCGGGTCCTCAGGTAGAACTCGCCTTCGAAGCTGTTaGTGCTGCTGTTGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: EDGGSGSQHLTFGSSGRTRLRSC*CCCCCK
Trigger: TTTGCAGCAACAGCAGCAGCAACAGCTTCGAAGGCG...AGTTCTACCTGAGGACCCGAAGGTGAGGTGCTGTGAACCACTCCCTCCATCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCGGCGGCCCTGACTGTTaGCAGTCTTTCGCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAGGPDC*QSFAPG
Trigger: CCCGGGGGCGAAAGACTGCCAACAGTCAGGGCCGCC...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACCCCTTACGGCGGCCCTaGCTGTTGGCAGTCTTTCGC +
Preference number: 4 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHPLRRP*LLAVFR
Trigger: GCGAAAGACTGCCAACAGTCAGGGCCGCCGTAAGGG...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp GAGGATGGAGGGAGTGGTTCACAGCACCTCACCTTCGGGTCCTCAGGTAGAACTTTCTTGTATGGCTCCTaGGGTACCTCTGACTACACC +
Preference number: 4 (lower is better)
Translates to: EDGGSGSQHLTFGSSGRTFLYGS*GTSDYT
Trigger: GGTGTAGTCAGAGGTACCGCAGGAGCCATACAAGAA...AGTTCTACCTGAGGACCCGAAGGTGAGGTGCTGTGAACCACTCCCTCCATCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACGAAACCACCGGGAGCTaGCTAAGCGTGGGAGCCGAC +
Preference number: 4 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHETTGS*LSVGAD
Trigger: GTCGGCTCCCACGCTTAGCCAGCTCCCGGTGGTTTC...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp ATTCCAGTGAATCATGATCCACTGGGGATGGGCCTGGATGAAACGGTTCATAACGAAACCACCGGGAGCTaGCTAAGCGTGGGAGCCGAC +
Preference number: 4 (lower is better)
Translates to: IPVNHDPLGMGLDETVHNETTGS*LSVGAD
Trigger: GTCGGCTCCCACGCTTAGCCAGCTCCCGGTGGTTTC...GTTATGAACCGTTTCATCCAGGCCCATCCCCAGTGGATCATGATTCACTGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR CCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCCGGTGGCAGAGGTGGTaGGGGCTCTTCAGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYARWQRW*GLFSSR
Trigger: GCGGCTACTGAAGAGCCCCCACCACCTCTGCCACCG...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp GAGGATGGAGGGAGTGGTTCACAGCACCTCACCTTCGGGTCCTCAGGTAGAACTCTTGTTCCCCCTGGATaGGGCACTAAAATTGTTGGA +
Preference number: 4 (lower is better)
Translates to: EDGGSGSQHLTFGSSGRTLVPPG*GTKIVG
Trigger: TCCAACAATTTTAGTGCCTCATCCAGGGGGAACAAG...AGTTCTACCTGAGGACCCGAAGGTGAGGTGCTGTGAACCACTCCCTCCATCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR TCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACGAGCGAACATATCCATaGCTGCCAGGTCGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHERTYP*LPGRPG
Trigger: GCCTGGCCGACCTGGCAGTCATGGATATGTTCGCTC...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp GAGGATGGAGGGAGTGGTTCACAGCACCTCACCTTCGGGTCCTCAGGTAGAACTTTCTGGAGAGACCCTTaGACCTGGTCTTTGATGATG +
Preference number: 4 (lower is better)
Translates to: EDGGSGSQHLTFGSSGRTFWRDP*TWSLMM
Trigger: CATCATCAAAGACCAGGTTCAAGGGTCTCTCCAGAA...AGTTCTACCTGAGGACCCGAAGGTGAGGTGCTGTGAACCACTCCCTCCATCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR TCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCCCTTGGCCGCCATCTTaGCTCAACCCCTCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAPWPPS*LNPSPS
Trigger: GGAGGGAGAGGGGTTGAGTCAAGATGGCGGCCAAGG...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395857.7
CDS-3UTR GCA 90 bp GAGGATGGAGGGAGTGGTTCACAGCACCTCACCTTCGGGTCCTCAGGTAGAACTGCTGGTTTCTGCCTCTaGGTTTCCCATAATTCCTTC +
Preference number: 4 (lower is better)
Translates to: EDGGSGSQHLTFGSSGRTAGFCL*VSHNSF
Trigger: GAAGGAATTATGGGAAACGCAGAGGCAGAAACCAGC...AGTTCTACCTGAGGACCCGAAGGTGAGGTGCTGTGAACCACTCCCTCCATCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR GCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACCTGCTCTGCAGGCTCTaGGCCCCTCTGAGACAAGAG +
Preference number: 4 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHLLCRL*APLRQE
Trigger: CTCTTGTCTCAGAGGGGCGCAGAGCCTGCAGAGCAG...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGGGCGGCCCTGACTGTTaGCAGTCTTTCGCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLGGPDC*QSFAPG
Trigger: CCCGGGGGCGAAAGACTGCCAACAGTCAGGGCCGCC...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATCGGTGGCAGAGGTGGTaGGGGCTCTTCAGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNRWQRW*GLFSSR
Trigger: GCGGCTACTGAAGAGCCCCCACCACCTCTGCCACCG...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTGGCGGTGGCAGAGGTaGTGGGGGCTCTTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAWRWQR*WGLFSS
Trigger: GCTACTGAAGAGCCCCCACCACCTCTGCCACCGCCA...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATGTTGGTATGCCAGTCTaGGGCAGAGCCGGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNVGMPV*GRAGVP
Trigger: GGGCACCCCGGCTCTGCCCCAGACTGGCATACCAAC...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACGAGGCTGGCAGGCCTTaGCTTATTGAAGGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHEAGRP*LIEGPP
Trigger: TGGGGGCCCTTCAATAAGCCAAGGCCTGCCAGCCTC...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACCCTAGCAATGGTGGCTaGAAGACCAGCTCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHPSNGG*KTSSPL
Trigger: CAGAGGGGAGCTGGTCTTTCAGCCACCATTGCTAGG...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATGCCAGAGCTTACCACTaGCGTGTGCCGGGAACGCAC +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNARAYH*RVPGTH
Trigger: GTGCGTTCCCGGCACACGTCAGTGGTAAGCTCTGGC...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATCAGGCCTTGGCTTATTaGAGGGCCCCCAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNQALAY*RAPSRQ
Trigger: CTGCCTGCTGGGGGCCCTTCAATAAGCCAAGGCCTG...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp GAGGATGGAGGGAGTGGTTCACAGCACCTCACCTTCGGGTCCTCAGGTAGAACTGGAAGTGGATCATCATaGAGGTCTTCATCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: EDGGSGSQHLTFGSSGRTGSGSS*RSSSLS
Trigger: TGACAAGGATGAAGACCTTCATGATGATCCACTTCC...AGTTCTACCTGAGGACCCGAAGGTGAGGTGCTGTGAACCACTCCCTCCATCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR GCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCCTTACCACTGACGTGTaGCGGGAACGCACGGTCTCG +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYALTTDV*RERTVS
Trigger: CGAGACCGTGCGTTCCCGGCACACGTCAGTGGTAAG...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCCTGCTCTGCAGGCTCTaGGCCCCTCTGAGACAAGAG +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYALLCRL*APLRQE
Trigger: CTCTTGTCTCAGAGGGGCGCAGAGCCTGCAGAGCAG...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATCGGGCATCATTCCTCTaGTCTGCAGGCTCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNRASFL*SAGSAP
Trigger: GGGCGCAGAGCCTGCAGAGCAGAGGAATGATGCCCG...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATGAAACCACCGGGAGCTaGCTAAGCGTGGGAGCCGAC +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNETTGS*LSVGAD
Trigger: GTCGGCTCCCACGCTTAGCCAGCTCCCGGTGGTTTC...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCGGGTTCTGGTGGCGGTaGCAGAGGTGGTGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIGFWWR*QRWWGL
Trigger: GAGCCCCCACCACCTCTGCCACCGCCACCAGAACCC...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGGTTGGTATGCCAGTCTaGGGCAGAGCCGGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRVGMPV*GRAGVP
Trigger: GGGCACCCCGGCTCTGCCCCAGACTGGCATACCAAC...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GAGGATGGAGGGAGTGGTTCACAGCACCTCACCTTCGGGTCCTCAGGTAGAACTTTCAGTTGTTGCTCTTaGTGTCCCCTGCATTATGGA +
Preference number: 4 (lower is better)
Translates to: EDGGSGSQHLTFGSSGRTFSCCS*CPLHYG
Trigger: TCCATAATGCAGGGGACACCAAGAGCAACAACTGAA...AGTTCTACCTGAGGACCCGAAGGTGAGGTGCTGTGAACCACTCCCTCCATCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCCAGTGGCTGCTCTCTTaGGGAGAGTCCTCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAQWLLS*GESSGH
Trigger: GTGGCCAGAGGACTCTCCCCAAGAGAGCAGCCACTG...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCGTCTGCAGTTTCTCCTaGGGTGGCGCAGGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAVCSFS*GGAGEL
Trigger: CAGCTCACCTGCGCCACCCCAGGAGAAACTGCAGAC...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATTGCACAACCGGAACCTaGGGTGGGGAGATGGGCTCG +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNCTTGT*GGEMGS
Trigger: CGAGCCCATCTCCCCACCCCAGGTTCCGGTTGTGCA...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp ATTCCAGTGAATCATGATCCACTGGGGATGGGCCTGGATGAAACGGTTCATAACTCTCCCATGCCTCCATaGGCTGATCATAACGCTGGC +
Preference number: 4 (lower is better)
Translates to: IPVNHDPLGMGLDETVHNSPMPP*ADHNAG
Trigger: GCCAGCGTTATGATCAGCTCATGGAGGCATGGGAGA...GTTATGAACCGTTTCATCCAGGCCCATCCCCAGTGGATCATGATTCACTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR TCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCCCTTACGGCGGCCCTaGCTGTTGGCAGTCTTTCGC +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLPLRRP*LLAVFR
Trigger: GCGAAAGACTGCCAACAGTCAGGGCCGCCGTAAGGG...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGCAGGCCTTGGCTTATTaGAGGGCCCCCAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRQALAY*RAPSRQ
Trigger: CTGCCTGCTGGGGGCCCTTCAATAAGCCAAGGCCTG...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACTGTGATCAGCAAGTGTaGTCAGCCGATGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHCDQQV*SADGSW
Trigger: CCAGGACCCATCGGCTGATCACACTTGCTGATCACA...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp ATTCCAGTGAATCATGATCCACTGGGGATGGGCCTGGATGAAACGGTTCATAACATACTGCGGTGTTTCTaGTCCACAGGAGGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: IPVNHDPLGMGLDETVHNILRCF*STGGGD
Trigger: GTCCCCTCCTCCTGTGGAGCAGAAACACCGCAGTAT...GTTATGAACCGTTTCATCCAGGCCCATCCCCAGTGGATCATGATTCACTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR GCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATGAGGTCGGAGGAAGCTaGAGCAATCCGTTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNEVGGS*SNPFPL
Trigger: GAGCGGGAACGGATTGCTGCAGCTTCCTCCGACCTC...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATTTCGCCCCCGGGGTGTaGCTTGCTCTCTTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNFAPGV*LALFPQ
Trigger: CTGAGGAAAGAGAGCAAGCCACACCCCGGGGGCGAA...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGGGCGGCCCTGACTGTTaGCAGTCTTTCGCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRGGPDC*QSFAPG
Trigger: CCCGGGGGCGAAAGACTGCCAACAGTCAGGGCCGCC...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATACGGTGGCAGAGGTGGTaGGGGCTCTTCAGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVIRWQRW*GLFSSR
Trigger: GCGGCTACTGAAGAGCCCCCACCACCTCTGCCACCG...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCGTGCAGTTTCCGTGGTaGGCTCAAGCTCAACCGCAG +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAVQFPW*AQAQPQ
Trigger: CTGCGGTTGAGCTTGAGCCCACCACGGAAACTGCAC...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGGGCGGTGGCCTGGTTaGTCGAGTTGTCGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVIGRWPG*SSCRKP
Trigger: CGGCTTCCGACAACTCGACCAACCAGGCCACCGCCC...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGGAGGGGGCGGTGGCCTaGTTGGTCGAGTTGTCGGAA +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLEGAVA*LVELSE
Trigger: TTCCGACAACTCGACCAACCAGGCCACCGCCCCCTC...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCGTTGGTATGCCAGTCTaGGGCAGAGCCGGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIVGMPV*GRAGVP
Trigger: GGGCACCCCGGCTCTGCCCCAGACTGGCATACCAAC...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCGTCCACCCCAGGCACTaGAGACTTCGCTGGGATACT +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAVHPRH*RLRWDT
Trigger: AGTATCCCAGCGAAGTCTCCAGTGCCTGGGGTGGAC...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCGGATCAAACGGACTGTaGCTCACGACAGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAGSNGL*LTTGST
Trigger: GGTGGACCCTGTCGTGAGCCACAGTCCGTTTGATCC...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACCTGGATCCAAGTGCGTaGGCAGGTGGCTCCGATAAA +
Preference number: 4 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHLDPSA*AGGSDK
Trigger: TTTATCGGAGCCACCTGCCCACGCACTTGGATCCAG...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGAACCGGAACCTGGGGTaGGGAGATGGGCTCGTAGGG +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRNRNLG*GDGLVG
Trigger: CCCTACGAGCCCATCTCCCCACCCCAGGTTCCGGTT...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCACAGCAGCTCGATGCTaGAGCTGTGGCAGATCCAGT +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYATAARC*SCGRSS
Trigger: ACTGGATCTGCCACAGCTTCAGCATCGAGCTGCTGT...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp CTCCAGGTGATGGTAAATAAAGTAATACGCACATGCATTATGATGAGGATGGAGTTTTGGATGACGGGATaGGAGGGGGCGGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LQVMVNKVIRTCIMMRMEFWMTG*EGAVAW
Trigger: CCAGGCCACCGCCCCCTCTCATCCCGTCATCCAAAA...CTCCATCCTCATCATAATGCATGTGCGTATTACTTTATTTACCATCACCTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR TCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGCACTGTGGTTTTGGATaGCGGGATGAGAGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRHCGFG*RDERGR
Trigger: CCGCCCCCTCTCATCCCGTCATCCAAAACCACAGTG...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCGGATCCAAAGCCCTGTaGAAAGGCATGGCTGGATCC +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAGSKAL*KGMAGS
Trigger: GGATCCAGCCATGCCTTTTCACAGGGCTTTGGATCC...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCCAGCAGGCAGTGGCATaGTTCGTAGCTGAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAQQAVA*FVAEQL
Trigger: CAACTGCTCAGCTACGAATCATGCCACTGCCTGCTG...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATCATTCCCTCTGCCTGTaGAGAAGGGGGCAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNHSLCL*RRGQLL
Trigger: CAACAGCTGCCCCCTTCTTCACAGGCAGAGGGAATG...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTGTGATCAGCAAGTGTaGTCAGCCGATGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYACDQQV*SADGSW
Trigger: CCAGGACCCATCGGCTGATCACACTTGCTGATCACA...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCCAAACTCCTCCTGAATaGGGTGATGGGTCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAQTPPE*GDGSPS
Trigger: GGAAGGGGACCCATCACCTCATTCAGGAGGAGTTTG...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395851.5
CDS-3UTR GCA 90 bp ATTCCAGTGAATCATGATCCACTGGGGATGGGCCTGGATGAAACGGTTCATAACCGCCTTCGAAGCTGTTaGTGCTGCTGTTGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: IPVNHDPLGMGLDETVHNRLRSC*CCCCCK
Trigger: TTTGCAGCAACAGCAGCAGCAACAGCTTCGAAGGCG...GTTATGAACCGTTTCATCCAGGCCCATCCCCAGTGGATCATGATTCACTGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR GCA 90 bp ATTCCAGTGAATCATGATCCACTGGGGATGGGCCTGGATGAAACGGTTCATAACGAGGGTCGAGCAATTTaGTGGTTTCTGCCTCTGCGT +
Preference number: 4 (lower is better)
Translates to: IPVNHDPLGMGLDETVHNEGRAI*WFLPLR
Trigger: ACGCAGAGGCAGAAACCAGCAAATTGCTCGACCCTC...GTTATGAACCGTTTCATCCAGGCCCATCCCCAGTGGATCATGATTCACTGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR GCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTAAGTAGCCGCTGCGGCTaGAGCACTGGCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLSSRCG*STGSCS
Trigger: GCTGCAGCTGCCAGTGCTGCAGCCGCAGCGGCTACT...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTGGGTCCTGGGCACTTaGCCCATTCCCTCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRWVLGT*PIPSAC
Trigger: ACAGGCAGAGGGAATGGGGCAAGTGCCCAGGACCCA...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCTGCTCTGCAGGCTCTaGGCCCCTCTGAGACAAGAG +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLLLCRL*APLRQE
Trigger: CTCTTGTCTCAGAGGGGCGCAGAGCCTGCAGAGCAG...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCCTGGCTGAGCAGCTaGCATATCAGAGTCACCTCC +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYASWLSS*HIRVTS
Trigger: GGAGGTGACTCTGATATGGCAGCTGCTCAGCCAGGA...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACAGAAGGGGTTGGTCTTaGTATCTTGGGTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHRRGWS*YLGWQR
Trigger: CCTCTGCCACCCAAGATAGCAAGACCAACCCCTTCT...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGCCGAATGCTGGATCCTaGTGGTGGCGGGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRPNAGS*WWRVLG
Trigger: TCCCAACACCCGCCACCAGCAGGATCCAGCATTCGG...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395857.7
CDS-3UTR CCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAGGCGGCCCTGACTGTTaGCAGTCTTTCGCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQGGPDC*QSFAPG
Trigger: CCCGGGGGCGAAAGACTGCCAACAGTCAGGGCCGCC...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAGGGTTCTGGTGGCGGTaGCAGAGGTGGTGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQGFWWR*QRWWGL
Trigger: GAGCCCCCACCACCTCTGCCACCGCCACCAGAACCC...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGGTTCTGGTGGCGGTaGCAGAGGTGGTGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKGFWWR*QRWWGL
Trigger: GAGCCCCCACCACCTCTGCCACCGCCACCAGAACCC...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATTGGGTGCAGTTTCCGTaGTGGGCTCAAGCTCAACCG +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNWVQFP*WAQAQP
Trigger: CGGTTGAGCTTGAGCCCACCACGGAAACTGCACCCA...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGGGGCGGTGGCCTGGTTaGTCGAGTTGTCGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRGRWPG*SSCRKP
Trigger: CGGCTTCCGACAACTCGACCAACCAGGCCACCGCCC...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTCCAGGTGATGGTAAATAAAGTAATACGCACATGCATTATGATGAGGATGGAGGAGGGGGCGGTGGCCTaGTTGGTCGAGTTGTCGGAA +
Preference number: 4 (lower is better)
Translates to: LQVMVNKVIRTCIMMRMEEGAVA*LVELSE
Trigger: TTCCGACAACTCGACCAACCAGGCCACCGCCCCCTC...CTCCATCCTCATCATAATGCATGTGCGTATTACTTTATTTACCATCACCTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGGATGAGAGGGGGCGGTaGCCTGGTTGGTCGAGTTGT +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLDERGR*PGWSSC
Trigger: ACAACTCGACCAACCAGGCCACCGCCCCCTCTCATC...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCCACCAAAGCCTCTGTTaGTATGCCAGTCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAHQSLC*YASLGQ
Trigger: CTGCCCCAGACTGGCATACCAACAGAGGCTTTGGTG...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACGGGATACTTTCCCTCTaGGTAGGGGTCAGTGTCGAT +
Preference number: 4 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHGILSL*VGVSVD
Trigger: ATCGACACTGACCCCTACCCAGAGGGAAAGTATCCC...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCGTGAAAAGGCATGGCTaGATCCAAGTGCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAVKRHG*IQVRGQ
Trigger: CTGCCCACGCACTTGGATCCAGCCATGCCTTTTCAC...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGCAGTGGCTGCTCTCTTaGGGAGAGTCCTCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRQWLLS*GESSGH
Trigger: GTGGCCAGAGGACTCTCCCCAAGAGAGCAGCCACTG...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCGATTCCTCTCGTTGCTaGGTATGGGAGACCCAGTGG +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYADSSRC*VWETQW
Trigger: CCACTGGGTCTCCCATACCCAGCAACGAGAGGAATC...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGGAGGCTGGCAGGCCTTaGCTTATTGAAGGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLEAGRP*LIEGPP
Trigger: TGGGGGCCCTTCAATAAGCCAAGGCCTGCCAGCCTC...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GAGGATGGAGGGAGTGGTTCACAGCACCTCACCTTCGGGTCCTCAGGTAGAACTCTCATATCTGGATTTTaGAGGAGGCCCTTTATCTTT +
Preference number: 4 (lower is better)
Translates to: EDGGSGSQHLTFGSSGRTLISGF*RRPFIF
Trigger: AAAGATAAAGGGCCTCCTCCAAAATCCAGATATGAG...AGTTCTACCTGAGGACCCGAAGGTGAGGTGCTGTGAACCACTCCCTCCATCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCGTGGCGCAGGTGAGCTaGCAGGACTTATCACCTCAA +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAVAQVS*QDLSPQ
Trigger: TTGAGGTGATAAGTCCTGCCAGCTCACCTGCGCCAC...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATGGGGGCAGCTGTTGTTaGGGAGATGGTGATTCCTGC +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNGGSCC*GDGDSC
Trigger: GCAGGAATCACCATCTCCCCAACAACAGCTGCCCCC...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGAGTGTGATCAGCCGATaGGTCCTGGGCACTTGCCCC +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLSVISR*VLGTCP
Trigger: GGGGCAAGTGCCCAGGACCCATCGGCTGATCACACT...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTCCAGGTGATGGTAAATAAAGTAATACGCACATGCATTATGATGAGGATGGAGAACCGGAACCTGGGGTaGGGAGATGGGCTCGTAGGG +
Preference number: 4 (lower is better)
Translates to: LQVMVNKVIRTCIMMRMENRNLG*GDGLVG
Trigger: CCCTACGAGCCCATCTCCCCACCCCAGGTTCCGGTT...CTCCATCCTCATCATAATGCATGTGCGTATTACTTTATTTACCATCACCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CCA 90 bp CTCCAGGTGATGGTAAATAAAGTAATACGCACATGCATTATGATGAGGATGGAGTGCACAACCGGAACCTaGGGTGGGGAGATGGGCTCG +
Preference number: 4 (lower is better)
Translates to: LQVMVNKVIRTCIMMRMECTTGT*GGEMGS
Trigger: CGAGCCCATCTCCCCACCCCAGGTTCCGGTTGTGCA...CTCCATCCTCATCATAATGCATGTGCGTATTACTTTATTTACCATCACCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR TCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTACCCTTACGGCGGCCCTaGCTGTTGGCAGTCTTTCGC +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLPLRRP*LLAVFR
Trigger: GCGAAAGACTGCCAACAGTCAGGGCCGCCGTAAGGG...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCGCACTGTGCTCCTGCTaGTCTACATCCATCTGCTCT +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAALCSC*STSICS
Trigger: AGAGCAGATGGATGTAGATCAGCAGGAGCACAGTGC...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTTTTGGATGACGGGATaGGAGGGGGCGGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRFWMTG*EGAVAW
Trigger: CCAGGCCACCGCCCCCTCTCATCCCGTCATCCAAAA...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTGCCAGAGCTTACCACTaGCGTGTGCCGGGAACGCAC +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFARAYH*RVPGTH
Trigger: GTGCGTTCCCGGCACACGTCAGTGGTAAGCTCTGGC...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGGCAGTGCTGCCTCTGTaGTGGGGATCAAACGGACTG +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRAVLPL*WGSNGL
Trigger: CAGTCCGTTTGATCCCCATCACAGAGGCAGCACTGC...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATGGATCCAAAGCCCTGTaGAAAGGCATGGCTGGATCC +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNGSKAL*KGMAGS
Trigger: GGATCCAGCCATGCCTTTTCACAGGGCTTTGGATCC...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGCAGGCCTTGGCTTATTaGAGGGCCCCCAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRQALAY*RAPSRQ
Trigger: CTGCCTGCTGGGGGCCCTTCAATAAGCCAAGGCCTG...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAACTGGGGTGGCGCAGGTaGGCTGGCAGGACTTATCAC +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQLGWRR*AGRTYH
Trigger: GTGATAAGTCCTGCCAGCTCACCTGCGCCACCCCAG...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTACTGGGGTGGCGCAGGTaGGCTGGCAGGACTTATCAC +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLLGWRR*AGRTYH
Trigger: GTGATAAGTCCTGCCAGCTCACCTGCGCCACCCCAG...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATGGCTCCGAAGAGACGTaGCTCCTCTCTGGGGATTTT +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNGSEET*LLSGDF
Trigger: AAAATCCCCAGAGAGGAGTCACGTCTCTTCGGAGCC...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATATGTACAGAGGAGACTaGAGAGGGCCGTTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNMYRGD*RGPFRS
Trigger: GGAACGGAACGGCCCTCTTCAGTCTCCTCTGTACAT...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCGTGGGCTGGCTCTCCTaGAAAGTCTCAGGGAATAAG +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAVGWLS*KVSGNK
Trigger: CTTATTCCCTGAGACTTTTCAGGAGAGCCAGCCCAC...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp GAGGATGGAGGGAGTGGTTCACAGCACCTCACCTTCGGGTCCTCAGGTAGAACTTGTAAAATAAGGTACTaGAGCAAAAGGAGGACTGAT +
Preference number: 4 (lower is better)
Translates to: EDGGSGSQHLTFGSSGRTCKIRY*SKRRTD
Trigger: ATCAGTCCTCCTTTTGCTTCAGTACCTTATTTTACA...AGTTCTACCTGAGGACCCGAAGGTGAGGTGCTGTGAACCACTCCCTCCATCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR GCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACCGAAGCTGTTGCTGCTaGTGTTGCTGCAAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHRSCCC*CCCKSC
Trigger: ACAGCTTTTGCAGCAACAGCAGCAGCAACAGCTTCG...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR GCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATATACTGCGGTGTTTCTaGTCCACAGGAGGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNILRCF*STGGGD
Trigger: GTCCCCTCCTCCTGTGGAGCAGAAACACCGCAGTAT...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTGCAGCACTGGCAGCTaGAGCTTCGTTTGTCATGGA +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYACSTGS*SFVCHG
Trigger: TCCATGACAAACGAAGCTGCAGCTGCCAGTGCTGCA...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATAGTAGCCGCTGCGGCTaGAGCACTGGCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNSSRCG*STGSCS
Trigger: GCTGCAGCTGCCAGTGCTGCAGCCGCAGCGGCTACT...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAAGTAGCCGCTGCGGCTaGAGCACTGGCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQSSRCG*STGSCS
Trigger: GCTGCAGCTGCCAGTGCTGCAGCCGCAGCGGCTACT...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR GCA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAAAGTAGCCGCTGCGGCTaGAGCACTGGCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIESSRCG*STGSCS
Trigger: GCTGCAGCTGCCAGTGCTGCAGCCGCAGCGGCTACT...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTACTCTTCAGTAGCCGCTaGGGCTGCAGCACTGGCAGC +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLLFSSR*GCSTGS
Trigger: GCTGCCAGTGCTGCAGCCGCAGCGGCTACTGAAGAG...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGAAGCCTCTGTTGGTATaGCAGTCTGGGGCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRKPLLV*QSGAEP
Trigger: CGGCTCTGCCCCAGACTGGCATACCAACAGAGGCTT...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATCCCAGGGCTCAGTTGTaGTTTGGGAGCTTCATGCAG +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNPRAQL*FGSFMQ
Trigger: CTGCATGAAGCTCCCAAAGCACAACTGAGCCCTGGG...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATAGCACTTGCAGCAGCTaGAAGGTGTGTTGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNSTCSS*KVCWVS
Trigger: GGACACCCAACACACCTTGCAGCTGCTGCAAGTGCT...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTGGGTCCTGGGCACTTaGCCCATTCCCTCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIWVLGT*PIPSAC
Trigger: ACAGGCAGAGGGAATGGGGCAAGTGCCCAGGACCCA...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGATCATTCCTCTGCTCTaGAGGCTCTGCGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRIIPLL*RLCAPL
Trigger: CAGAGGGGCGCAGAGCCTGCAGAGCAGAGGAATGAT...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTCGGGCATCATTCCTCTaGTCTGCAGGCTCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFRASFL*SAGSAP
Trigger: GGGCGCAGAGCCTGCAGAGCAGAGGAATGATGCCCG...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTACGGGCATCATTCCTCTaGTCTGCAGGCTCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLRASFL*SAGSAP
Trigger: GGGCGCAGAGCCTGCAGAGCAGAGGAATGATGCCCG...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGCTGTTGGTGAGGAGCTaGTTGGTTCACCGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRLLVRS*LVHRRG
Trigger: CCCTCTGCGGTGAACCAAGCAGCTCCTCACCAACAG...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAACGGTGGCAGAGGTGGTaGGGGCTCTTCAGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQRWQRW*GLFSSR
Trigger: GCGGCTACTGAAGAGCCCCCACCACCTCTGCCACCG...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTTGGCGGTGGCAGAGGTaGTGGGGGCTCTTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFWRWQR*WGLFSS
Trigger: GCTACTGAAGAGCCCCCACCACCTCTGCCACCGCCA...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGTGGGTGCAGTTTCCGTaGTGGGCTCAAGCTCAACCG +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLWVQFP*WAQAQP
Trigger: CGGTTGAGCTTGAGCCCACCACGGAAACTGCACCCA...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCCATCAGCGCTGCACGTaGCACTGGAATCATTGTCTG +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAHQRCT*HWNHCL
Trigger: CAGACAATGATTCCAGTGCCACGTGCAGCGCTGATG...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGGCGGTGGCCTGGTTaGTCGAGTTGTCGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKGRWPG*SSCRKP
Trigger: CGGCTTCCGACAACTCGACCAACCAGGCCACCGCCC...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAGAGGGGGCGGTGGCCTaGTTGGTCGAGTTGTCGGAA +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQEGAVA*LVELSE
Trigger: TTCCGACAACTCGACCAACCAGGCCACCGCCCCCTC...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCACTACACCTTCATGTTaGGCCCTGACCAACAGACCC +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYATTPSC*ALTNRP
Trigger: GGGTCTGTTGGTCAGGGCCCAACATGAAGGTGTAGT...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCCACTGGAGACTTCGCTaGGATACTTTCCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAHWRLR*DTFPLG
Trigger: ACCCAGAGGGAAAGTATCCCAGCGAAGTCTCCAGTG...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATCTGGATCCAAGTGCGTaGGCAGGTGGCTCCGATAAA +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNLDPSA*AGGSDK
Trigger: TTTATCGGAGCCACCTGCCCACGCACTTGGATCCAG...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATCCCTGTGAAAAGGCATaGCTGGATCCAAGTGCGTGG +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNPCEKA*LDPSAW
Trigger: CCACGCACTTGGATCCAGCCATGCCTTTTCACAGGG...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATGTGGCGCAGGTGAGCTaGCAGGACTTATCACCTCAA +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNVAQVS*QDLSPQ
Trigger: TTGAGGTGATAAGTCCTGCCAGCTCACCTGCGCCAC...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGGGGGGCAGCTGTTGTTaGGGAGATGGTGATTCCTGC +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLGGSCC*GDGDSC
Trigger: GCAGGAATCACCATCTCCCCAACAACAGCTGCCCCC...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATATCAGCCGATGGGTCCTaGGCACTTGCCCCATTCCCT +
Preference number: 4 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVISADGS*ALAPFP
Trigger: AGGGAATGGGGCAAGTGCCCAGGACCCATCGGCTGA...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATGAAGTAGGAGGCTGCTaGGGAGTCTGCGAGGAAACT +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNEVGGC*GVCEET
Trigger: AGTTTCCTCGCAGACTCCCCAGCAGCCTCCTACTTC...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTGCACAACCGGAACCTaGGGTGGGGAGATGGGCTCG +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRCTTGT*GGEMGS
Trigger: CGAGCCCATCTCCCCACCCCAGGTTCCGGTTGTGCA...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACTCACAACTGAGGTGTTaGCAGTACCAGGCACTACTC +
Preference number: 4 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHSQLRC*QYQALL
Trigger: GAGTAGTGCCTGGTACTGCCAACACCTCAGTTGTGA...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTTCCCAGGCCCACCCTaGCGTCTGCCTATGGTAATC +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRFPGPP*RLPMVI
Trigger: GATTACCATAGGCAGACGCCAGGGTGGGCCTGGGAA...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTTTGCCTCCGAATGCTaGATCCTGCTGGTGGCGGGT +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRFASEC*ILLVAG
Trigger: ACCCGCCACCAGCAGGATCCAGCATTCGGAGGCAAA...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395857.7
CDS-3UTR TCA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATACCTAGCAATGGTGGCTaGAAGACCAGCTCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVIPSNGG*KTSSPL
Trigger: CAGAGGGGAGCTGGTCTTTCAGCCACCATTGCTAGG...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAACCCTTACGGCGGCCCTaGCTGTTGGCAGTCTTTCGC +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQPLRRP*LLAVFR
Trigger: GCGAAAGACTGCCAACAGTCAGGGCCGCCGTAAGGG...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR TCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACGCGACACTTTCACATTaGGACACATCTCGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHATLSH*DTSRSS
Trigger: TGAAGAGCGAGATGTGTCTCAATGTGAAAGTGTCGC...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACATATCTTCATCCTCCTaGGCAGAAACAGTGGAAGCG +
Preference number: 4 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHISSSS*AETVEA
Trigger: CGCTTCCACTGTTTCTGCTCAGGAGGATGAAGATAT...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGCTGCTGTCTCAGCACTaGTGCTGTCATTCACCTGGG +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRLLSQH*CCHSPG
Trigger: CCCAGGTGAATGACAGCATCAGTGCTGAGACAGCAG...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCTGCTGTCTCAGCACTaGTGCTGTCATTCACCTGGG +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLLLSQH*CCHSPG
Trigger: CCCAGGTGAATGACAGCATCAGTGCTGAGACAGCAG...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGACTGGAATCATTGTCTaGCTGGGGCTCGGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLTGIIV*LGLGPL
Trigger: CAAAGGCCCGAGCCCCAGTCAGACAATGATTCCAGT...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGACAGCAGCTCGATGCTaGAGCTGTGGCAGATCCAGT +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRTAARC*SCGRSS
Trigger: ACTGGATCTGCCACAGCTTCAGCATCGAGCTGCTGT...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAATTTTGGATGACGGGATaGGAGGGGGCGGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKFWMTG*EGAVAW
Trigger: CCAGGCCACCGCCCCCTCTCATCCCGTCATCCAAAA...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGCACTGTGGTTTTGGATaGCGGGATGAGAGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRHCGFG*RDERGR
Trigger: CCGCCCCCTCTCATCCCGTCATCCAAAACCACAGTG...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGCAGACCCTCAGGTTGTaGGTTTTGGCTTCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRQTLRL*VLASGR
Trigger: TCTCCCCGAAGCCAAAACTCACAACCTGAGGGTCTG...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCTTCATGTTGGGCCCTaGCCAACAGACCCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLLHVGP*PTDPQV
Trigger: AACCTGAGGGTCTGTTGGTCAGGGCCCAACATGAAG...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACTGCCTTGGAATCTCATaGATGGAACGCCCCATTTCT +
Preference number: 4 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHCLGIS*MERPIS
Trigger: AGAAATGGGGCGTTCCATTCATGAGATTCCAAGGCA...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATGCCAGAGCTTACCACTaGCGTGTGCCGGGAACGCAC +
Preference number: 4 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNARAYH*RVPGTH
Trigger: GTGCGTTCCCGGCACACGTCAGTGGTAAGCTCTGGC...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACGTAACCTGGAGTTGGTaGAAGCTGTCTCTGAAACAG +
Preference number: 4 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHVTWSW*KLSLKQ
Trigger: CTGTTTCAGAGACAGCTTTCACCAACTCCAGGTTAC...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACTATTGGTCAGGTCAATaGTTCCTCTCGTTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHYWSGQ*FLSLLG
Trigger: ACCCAGCAACGAGAGGAATCATTGACCTGACCAATA...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACCTTGTTCCCCCTGGATaGGGCACTAAAATTGTTGGA +
Preference number: 4 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHLVPPG*GTKIVG
Trigger: TCCAACAATTTTAGTGCCTCATCCAGGGGGAACAAG...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTGAGCGAACATATCCATaGCTGCCAGGTCGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFERTYP*LPGRPG
Trigger: GCCTGGCCGACCTGGCAGTCATGGATATGTTCGCTC...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCTCCTGAGTTCTTACTaGAGGGGAAGGGGAGCGAAC +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLLLSSY*RGRGAN
Trigger: GTTCGCTCCCCTTCCCCTTCAGTAAGAACTCAGGAG...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGCAGCAGGCAGTGGCATaGTTCGTAGCTGAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRQQAVA*FVAEQL
Trigger: CAACTGCTCAGCTACGAATCATGCCACTGCCTGCTG...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACGCTACTAGAAGAGTCTaGACTTTGAGAGCCACGTTC +
Preference number: 4 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHATRRV*TLRATF
Trigger: GAACGTGGCTCTCAAAGTTCAGACTCTTCTAGTAGC...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAACTGGGGTGGCGCAGGTaGGCTGGCAGGACTTATCAC +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKLGWRR*AGRTYH
Trigger: GTGATAAGTCCTGCCAGCTCACCTGCGCCACCCCAG...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTTGTTGGGGAGATGGTaGTTCCTGCTGTGGTCGATA +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYALLGRW*FLLWSI
Trigger: TATCGACCACAGCAGGAATCACCATCTCCCCAACAA...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCCATTCCCTCTGCCTGTaGAGAAGGGGGCAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIHSLCL*RRGQLL
Trigger: CAACAGCTGCCCCCTTCTTCACAGGCAGAGGGAATG...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGGCTTATACTCCCTGGTaGGCGGGCATCATTCCTCTG +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLAYTPW*AGIIPL
Trigger: CAGAGGAATGATGCCCGCTCACCAGGGAGTATAAGC...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGACCACTGGTCACAACTaGGGTGTTGGCAGTACCAGG +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRTTGHN*GVGSTR
Trigger: CCTGGTACTGCCAACACCTCAGTTGTGACCAGTGGT...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATGGGACTGCGAACTCCTaGTGGTGGCGGGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNGTANS*WWRVLG
Trigger: TCCCAACACCCGCCACCAGCAGGAGTTCGCAGTCCC...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR GCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGGACTGCGAACTCCTaGTGGTGGCGGGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKGTANS*WWRVLG
Trigger: TCCCAACACCCGCCACCAGCAGGAGTTCGCAGTCCC...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395851.5
CDS-3UTR GCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTGTTGCTGCTGCTGTTaGTGCAAAAGCTGTGATGCC +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYACCCCC*CKSCDA
Trigger: GGCATCACAGCTTTTGCAGCAACAGCAGCAGCAACA...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395851.5
CDS-3UTR GCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCCTTCGAAGCTGTTGCTaGTGCTGTTGCTGCAAAAGC +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYALRSCC*CCCCKS
Trigger: GCTTTTGCAGCAACAGCAGCAGCAACAGCTTCGAAG...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395851.5
CDS-3UTR GCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGCCTTCTGGCAGCGGGTaGACTAAAGGCAAAACCGCA +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRPSGSG*TKGKTA
Trigger: TGCGGTTTTGCCTTTAGTGCACCCGCTGCCAGAAGG...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395851.5
CDS-3UTR GCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGATACTGCGGTGTTTCTaGTCCACAGGAGGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRILRCF*STGGGD
Trigger: GTCCCCTCCTCCTGTGGAGCAGAAACACCGCAGTAT...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp ATTCCAGTGAATCATGATCCACTGGGGATGGGCCTGGATGAAACGGTTCATAACGCTGGTTTCTGCCTCTaGGTTTCCCATAATTCCTTC +
Preference number: 4 (lower is better)
Translates to: IPVNHDPLGMGLDETVHNAGFCL*VSHNSF
Trigger: GAAGGAATTATGGGAAACGCAGAGGCAGAAACCAGC...GTTATGAACCGTTTCATCCAGGCCCATCCCCAGTGGATCATGATTCACTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR GCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATTGCAGCACTGGCAGCTaGAGCTTCGTTTGTCATGGA +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNCSTGS*SFVCHG
Trigger: TCCATGACAAACGAAGCTGCAGCTGCCAGTGCTGCA...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAACTCTTCAGTAGCCGCTaGGGCTGCAGCACTGGCAGC +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQLFSSR*GCSTGS
Trigger: GCTGCCAGTGCTGCAGCCGCAGCGGCTACTGAAGAG...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR GCA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATCTCTTCAGTAGCCGCTaGGGCTGCAGCACTGGCAGC +
Preference number: 4 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNLFSSR*GCSTGS
Trigger: GCTGCCAGTGCTGCAGCCGCAGCGGCTACTGAAGAG...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACCCCGTAGGGATGGAATaGTCTCCACTGAAATTTTGC +
Preference number: 4 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHPVGME*SPLKFC
Trigger: GCAAAATTTCAGTGGAGAGCATTCCATCCCTACGGG...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGCTTACCACTGACGTGTaGCGGGAACGCACGGTCTCG +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRLTTDV*RERTVS
Trigger: CGAGACCGTGCGTTCCCGGCACACGTCAGTGGTAAG...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCGCTTTGGGAGCTTCATaGAGTGTGGACCTAAGAACG +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAALGAS*SVDLRT
Trigger: CGTTCTTAGGTCCACACTGCATGAAGCTCCCAAAGC...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCCACAGGGGTCCTCCGTaGACTGGTGTCATCATAAAT +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAHRGPP*TGVIIN
Trigger: ATTTATGATGACACCAGTGCACGGAGGACCCCTGTG...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CTCCAGGTGATGGTAAATAAAGTAATACGCACATGCATTATGATGAGGATGGAGCCTCGCCTGCAGTGCTaGCTCTGTGATGGGGATCAA +
Preference number: 4 (lower is better)
Translates to: LQVMVNKVIRTCIMMRMEPRLQC*LCDGDQ
Trigger: TTGATCCCCATCACAGAGGCAGCACTGCAGGCGAGG...CTCCATCCTCATCATAATGCATGTGCGTATTACTTTATTTACCATCACCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR GCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGAAACCTCGCCTGCAGTaGTGCCTCTGTGATGGGGAT +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLKPRLQ*CLCDGD
Trigger: ATCCCCATCACAGAGGCAGCACTGCAGGCGAGGTTT...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTATGGCTGGATCCAAGTaGGTGGGCAGGTGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFMAGSK*VGRWLR
Trigger: TCGGAGCCACCTGCCCACGCACTTGGATCCAGCCAT...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGTGTCCATGGGAGGAGTaGTTGTTCCCCCTGGATGAG +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLCPWEE*LFPLDE
Trigger: CTCATCCAGGGGGAACAAGCACTCCTCCCATGGACA...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTAGAGGTCGGAGGAAGCTaGAGCAATCCGTTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLEVGGS*SNPFPL
Trigger: GAGCGGGAACGGATTGCTGCAGCTTCCTCCGACCTC...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCACATCCATCTGGGGTaGAGAAGCTGCAGCATCCAC +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLHIHLG*RSCSIH
Trigger: GTGGATGCTGCAGCTTCTGCACCCCAGATGGATGTG...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTATGGGTCCTGGGCACTTaGCCCATTCCCTCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLWVLGT*PIPSAC
Trigger: ACAGGCAGAGGGAATGGGGCAAGTGCCCAGGACCCA...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGGTAGAAGTAGGAGGCTaGTGGGGAGTCTGCGAGGAA +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRVEVGG*WGVCEE
Trigger: TTCCTCGCAGACTCCCCAGCAGCCTCCTACTTCTAC...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATCTGTCCTGTTTCTCATaGACAACCGGAACCTGGGGT +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNLSCFS*TTGTWG
Trigger: ACCCCAGGTTCCGGTTGTGCATGAGAAACAGGACAG...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTCCTGGCTGAGCAGCTaGCATATCAGAGTCACCTCC +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRSWLSS*HIRVTS
Trigger: GGAGGTGACTCTGATATGGCAGCTGCTCAGCCAGGA...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGCGCAGAGGGAGCACATaGAATCGGTGTTGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRRRGST*NRCWWS
Trigger: ACTCCACCAACACCGATTGCATGTGCTCCCTCTGCG...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CTCCAGGTGATGGTAAATAAAGTAATACGCACATGCATTATGATGAGGATGGAGCTGTTGGTGAGGAGCTaGTTGGTTCACCGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: LQVMVNKVIRTCIMMRMELLVRS*LVHRRG
Trigger: CCCTCTGCGGTGAACCAAGCAGCTCCTCACCAACAG...CTCCATCCTCATCATAATGCATGTGCGTATTACTTTATTTACCATCACCTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTATTCGCCCCCGGGGTGTaGCTTGCTCTCTTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLFAPGV*LALFPQ
Trigger: CTGAGGAAAGAGAGCAAGCCACACCCCGGGGGCGAA...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAATGGCGGTGGCAGAGGTaGTGGGGGCTCTTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQWRWQR*WGLFSS
Trigger: GCTACTGAAGAGCCCCCACCACCTCTGCCACCGCCA...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACAGATGCATGGTTTTCTaGCACCCTCACTTCAACGTC +
Preference number: 4 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHRCMVF*HPHFNV
Trigger: GACGTTGAAGTGAGGGTGCCAGAAAACCATGCATCT...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp GAGGATGGAGGGAGTGGTTCACAGCACCTCACCTTCGGGTCCTCAGGTAGAACTCCAAGTCTCTTTCTTTaGTATTATCACCTTCAACTT +
Preference number: 4 (lower is better)
Translates to: EDGGSGSQHLTFGSSGRTPSLFL*YYHLQL
Trigger: AAGTTGAAGGTGATAATACCAAAGAAAGAGACTTGG...AGTTCTACCTGAGGACCCGAAGGTGAGGTGCTGTGAACCACTCCCTCCATCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGCGCTGCACGTGGCACTaGAATCATTGTCTGACTGGG +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRRCTWH*NHCLTG
Trigger: CCCAGTCAGACAATGATTCCAGTGCCACGTGCAGCG...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATCATCAGCGCTGCACGTaGCACTGGAATCATTGTCTG +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNHQRCT*HWNHCL
Trigger: CAGACAATGATTCCAGTGCCACGTGCAGCGCTGATG...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCGCAGGATACCATTGGTaGGATAACAGCAGCTCGATG +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAAGYHW*DNSSSM
Trigger: CATCGAGCTGCTGTTATCCCACCAATGGTATCCTGC...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTGATGAGAGGGGGCGGTaGCCTGGTTGGTCGAGTTGT +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFDERGR*PGWSSC
Trigger: ACAACTCGACCAACCAGGCCACCGCCCCCTCTCATC...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCATCCCACTGACGGCTTaGGTGTTTCTTGAGTGTAGG +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAIPLTA*VFLECR
Trigger: CCTACACTCAAGAAACACCCAAGCCGTCAGTGGGAT...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTGGGCATTCTCGAAATaGACCCCTTCACCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAWAFSK*TPSPKP
Trigger: AGGCTTTGGTGAAGGGGTCCATTTCGAGAATGCCCA...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCGGATCAAACGGACTGTaGCTCACGACAGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIGSNGL*LTTGST
Trigger: GGTGGACCCTGTCGTGAGCCACAGTCCGTTTGATCC...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGGTGAAAAGGCATGGCTaGATCCAAGTGCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRVKRHG*IQVRGQ
Trigger: CTGCCCACGCACTTGGATCCAGCCATGCCTTTTCAC...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGCCCTGTGAAAAGGCATaGCTGGATCCAAGTGCGTGG +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRPCEKA*LDPSAW
Trigger: CCACGCACTTGGATCCAGCCATGCCTTTTCACAGGG...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCCTCTGGCCACATCTaGACGCAAGTTCACTTGCAT +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYASSGHI*TQVHLH
Trigger: ATGCAAGTGAACTTGCGTCCAGATGTGGCCAGAGGA...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGTTGGGGAGAGTCCTCTaGCCACATCTGGACGCAAGT +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLLGRVL*PHLDAS
Trigger: ACTTGCGTCCAGATGTGGCCAGAGGACTCTCCCCAA...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGGGTGTCCTGGAGACATaGAAGCAGAGTTGTACGGCC +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRGVLET*KQSCTA
Trigger: GGCCGTACAACTCTGCTTCCATGTCTCCAGGACACC...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAGAGGCTGGCAGGCCTTaGCTTATTGAAGGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQEAGRP*LIEGPP
Trigger: TGGGGGCCCTTCAATAAGCCAAGGCCTGCCAGCCTC...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAGTCTGCAGTTTCTCCTaGGGTGGCGCAGGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQVCSFS*GGAGEL
Trigger: CAGCTCACCTGCGCCACCCCAGGAGAAACTGCAGAC...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAATCAGCCGATGGGTCCTaGGCACTTGCCCCATTCCCT +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQSADGS*ALAPFP
Trigger: AGGGAATGGGGCAAGTGCCCAGGACCCATCGGCTGA...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCAGCCGATGGGTCCTaGGCACTTGCCCCATTCCCT +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRSADGS*ALAPFP
Trigger: AGGGAATGGGGCAAGTGCCCAGGACCCATCGGCTGA...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGTGTGATCAGCCGATaGGTCCTGGGCACTTGCCCC +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQSVISR*VLGTCP
Trigger: GGGGCAAGTGCCCAGGACCCATCGGCTGATCACACT...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATAACCGGAACCTGGGGTaGGGAGATGGGCTCGTAGGG +
Preference number: 4 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNNRNLG*GDGLVG
Trigger: CCCTACGAGCCCATCTCCCCACCCCAGGTTCCGGTT...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACTTGGTCTTGCTATCTTaGGTGGCAGAGGTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHLVLLS*VAEVEE
Trigger: TTCTTCCACCTCTGCCACCCAAGATAGCAAGACCAA...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp TTCCTCATCACCTGGTTTGTCTTGATGTTCTCATGGTACACCTTGGTATCTGATGATTCCAGTGAATCATaGTCCACTGGGGATGGGCCT +
Preference number: 4 (lower is better)
Translates to: FLITWFVLMFSWYTLVSDDSSES*STGDGP
Trigger: AGGCCCATCCCCAGTGGATCATGATTCACTGGAATC...ATCAGATACCAAGGTGTACCATGAGAACATCAAGACAAACCAGGTGATGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR TCA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATATCTCCCATGCCTCCATaGGCTGATCATAACGCTGGC +
Preference number: 4 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVISPMPP*ADHNAG
Trigger: GCCAGCGTTATGATCAGCTCATGGAGGCATGGGAGA...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCCTCTGCCCAACTCGCTaGAATCTTTCTTGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYALCPTR*NLSCCS
Trigger: AGAACAGCAAGAAAGATTTCAGCGAGTTGGGCAGAG...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAACCTAGCAATGGTGGCTaGAAGACCAGCTCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQPSNGG*KTSSPL
Trigger: CAGAGGGGAGCTGGTCTTTCAGCCACCATTGCTAGG...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTGTCCTCGCTGGGCTTaGCAGCTTCAACTTCGCTGT +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLICPRWA*QLQLRC
Trigger: ACAGCGAAGTTGAAGCTGTCAAGCCCAGCGAGGACA...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR TCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGGCACTGTGCTCCTGCTaGTCTACATCCATCTGCTCT +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLALCSC*STSICS
Trigger: AGAGCAGATGGATGTAGATCAGCAGGAGCACAGTGC...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCCTCCTCCAGGAGTGCTaGCTCATGCATTGCTTTAAT +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYALLQEC*LMHCFN
Trigger: ATTAAAGCAATGCATGAGTCAGCACTCCTGGAGGAG...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATACTCCTGCGGTACCTCTaGCTACACCTTCATGTTGGG +
Preference number: 4 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVILLRYL*LHLHVG
Trigger: CCCAACATGAAGGTGTAGTCAGAGGTACCGCAGGAG...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTGCAGTGCTGCCTCTGTaGTGGGGATCAAACGGACTG +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFAVLPL*WGSNGL
Trigger: CAGTCCGTTTGATCCCCATCACAGAGGCAGCACTGC...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGAGCGAACATATCCATaGCTGCCAGGTCGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKERTYP*LPGRPG
Trigger: GCCTGGCCGACCTGGCAGTCATGGATATGTTCGCTC...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGCATTCCCTCTGCCTGTaGAGAAGGGGGCAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRHSLCL*RRGQLL
Trigger: CAACAGCTGCCCCCTTCTTCACAGGCAGAGGGAATG...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTGTGATCAGCAAGTGTaGTCAGCCGATGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLICDQQV*SADGSW
Trigger: CCAGGACCCATCGGCTGATCACACTTGCTGATCACA...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTTCTGGAGAGACCCTTaGACCTGGTCTTTGATGATG +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAFWRDP*TWSLMM
Trigger: CATCATCAAAGACCAGGTTCAAGGGTCTCTCCAGAA...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGGCTCCGAAGAGACGTaGCTCCTCTCTGGGGATTTT +
Preference number: 4 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVIGSEET*LLSGDF
Trigger: AAAATCCCCAGAGAGGAGTCACGTCTCTTCGGAGCC...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACAGATTTCCTGCTGTTTaGCTTGCTGATCAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHRFPAV*LADQLW
Trigger: CCAAAGCTGATCAGCAAGTCAAACAGCAGGAAATCT...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAATGTACAGAGGAGACTaGAGAGGGCCGTTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVIMYRGD*RGPFRS
Trigger: GGAACGGAACGGCCCTCTTCAGTCTCCTCTGTACAT...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGATCCTGTTCTGTTGGTaGGGAGCTGCTTGGTTCACC +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRILFCW*GAAWFT
Trigger: GGTGAACCAAGCAGCTCCTCACCAACAGAACAGGAT...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACGGAAGTGGATCATCATaGAGGTCTTCATCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHGSGSS*RSSSLS
Trigger: TGACAAGGATGAAGACCTTCATGATGATCCACTTCC...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp ATCTCCTTTTCATGGTCAGTCCAAACATTCATAAACTGCCTATCTTTATACACTGGGACTGCGAACTCCTaGTGGTGGCGGGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: ISFSWSVQTFINCLSLYTGTANS*WWRVLG
Trigger: TCCCAACACCCGCCACCAGCAGGAGTTCGCAGTCCC...AGTGTATAAAGATAGGCAGTTTATGAATGTTTGGACTGACCATGAAAAGGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR GCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGCGCCTTCGAAGCTGTTaGTGCTGCTGTTGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRRLRSC*CCCCCK
Trigger: TTTGCAGCAACAGCAGCAGCAACAGCTTCGAAGGCG...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395851.5
CDS-3UTR GCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCCTCAGGAGGTTTAGCTaGCTCTTCTTCAAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYALRRFS*LFFKLL
Trigger: CAACAGCTTGAAGAAGAGGCAGCTAAACCTCCTGAG...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATACCCCGGGGTGTGGCTTaGTCTCTTTCCTCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVIPRGVA*SLSSVS
Trigger: AGAAACTGAGGAAAGAGAGCAAGCCACACCCCGGGG...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCATAGGAAACATTCTCTaGCTCTCTGGCTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAIGNIL*LSGSPS
Trigger: GGATGGAGAGCCAGAGAGGCAGAGAATGTTTCCTAT...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCTCCACTGAAATTTTaGTGGTTGGAGTTCCCCGAG +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYASPLKF*WLEFPE
Trigger: CTCGGGGAACTCCAACCAGCAAAATTTCAGTGGAGA...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTAAAGCCTCTGTTGGTATaGCAGTCTGGGGCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLKPLLV*QSGAEP
Trigger: CGGCTCTGCCCCAGACTGGCATACCAACAGAGGCTT...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTAAGCCTCTGTTGGTATaGCAGTCTGGGGCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFKPLLV*QSGAEP
Trigger: CGGCTCTGCCCCAGACTGGCATACCAACAGAGGCTT...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATATGCAGCTTCCTCTCTaGCTTTCTCAGGACTGCTGT +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNMQLPL*LSQDCC
Trigger: ACAGCAGTCCTGAGAAAGGCAGAGAGGAAGCTGCAT...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCAACATGGCCTTTGGATaGAGCTTCCTCTCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYANMAFG*SFLSAF
Trigger: AAAGGCAGAGAGGAAGCTGCATCCAAAGGCCATGTT...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATGCTCTTGGTGTCCCCTaGATTATGGAGCCAGACAAT +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNALGVP*IMEPDN
Trigger: ATTGTCTGGCTCCATAATGCAGGGGACACCAAGAGC...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCACGCACGGTCTCGCCTaGTTTCACATCCTCATATTT +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYATHGLA*FHILIF
Trigger: AAATATGAGGATGTGAAAGCAGGCGAGACCGTGCGT...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CTCCAGGTGATGGTAAATAAAGTAATACGCACATGCATTATGATGAGGATGGAGCCCAGGGCTCAGTTGTaGTTTGGGAGCTTCATGCAG +
Preference number: 4 (lower is better)
Translates to: LQVMVNKVIRTCIMMRMEPRAQL*FGSFMQ
Trigger: CTGCATGAAGCTCCCAAAGCACAACTGAGCCCTGGG...CTCCATCCTCATCATAATGCATGTGCGTATTACTTTATTTACCATCACCTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR GCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATCACAGGGGTCCTCCGTaGACTGGTGTCATCATAAAT +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNHRGPP*TGVIIN
Trigger: ATTTATGATGACACCAGTGCACGGAGGACCCCTGTG...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGCCTCGCCTGCAGTGCTaGCTCTGTGATGGGGATCAA +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRPRLQC*LCDGDQ
Trigger: TTGATCCCCATCACAGAGGCAGCACTGCAGGCGAGG...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTACCTCGCCTGCAGTGCTaGCTCTGTGATGGGGATCAA +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLPRLQC*LCDGDQ
Trigger: TTGATCCCCATCACAGAGGCAGCACTGCAGGCGAGG...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCAAACCTCGCCTGCAGTaGTGCCTCTGTGATGGGGAT +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIKPRLQ*CLCDGD
Trigger: ATCCCCATCACAGAGGCAGCACTGCAGGCGAGGTTT...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATATGGCTGGATCCAAGTaGGTGGGCAGGTGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNMAGSK*VGRWLR
Trigger: TCGGAGCCACCTGCCCACGCACTTGGATCCAGCCAT...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGCAGGTAAGCAGCCGCTaGAGGATCCAAAGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRQVSSR*RIQSPV
Trigger: CACAGGGCTTTGGATCCTGCAGCGGCTGCTTACCTG...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395851.5
CDS-3UTR GCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTCTGGGGTGCAGAAGCTaGAGCATCCACAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFLGCRS*SIHKSS
Trigger: GCTGCTCTTGTGGATGCTGCAGCTTCTGCACCCCAG...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAACTGGGGTGCAGAAGCTaGAGCATCCACAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQLGCRS*SIHKSS
Trigger: GCTGCTCTTGTGGATGCTGCAGCTTCTGCACCCCAG...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACGTTTTCTGCTCTAGCTaGTGCTGTTCACTAACTGCT +
Preference number: 4 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHVFCSS*CCSLTA
Trigger: AGCAGTTAGTGAACAGCAGCAGCTAGAGCAGAAAAC...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATTTGTCCGAGGCAATTTaGCGGGTGATGATCACGTCT +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNLSEAI*RVMITS
Trigger: AGACGTGATCATCACCCGGCAAATTGCCTCGGACAA...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGTAGAAGTAGGAGGCTaGTGGGGAGTCTGCGAGGAA +
Preference number: 4 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVIVEVGG*WGVCEE
Trigger: TTCCTCGCAGACTCCCCAGCAGCCTCCTACTTCTAC...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCTGTCCTGTTTCTCATaGACAACCGGAACCTGGGGT +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLLSCFS*TTGTWG
Trigger: ACCCCAGGTTCCGGTTGTGCATGAGAAACAGGACAG...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTATCATTCCTCTGCTCTaGAGGCTCTGCGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFIIPLL*RLCAPL
Trigger: CAGAGGGGCGCAGAGCCTGCAGAGCAGAGGAATGAT...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGATCATTCCTCTGCTCTaGAGGCTCTGCGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRIIPLL*RLCAPL
Trigger: CAGAGGGGCGCAGAGCCTGCAGAGCAGAGGAATGAT...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAACTGTTGGTGAGGAGCTaGTTGGTTCACCGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQLLVRS*LVHRRG
Trigger: CCCTCTGCGGTGAACCAAGCAGCTCCTCACCAACAG...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAACCGAATGCTGGATCCTaGTGGTGGCGGGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQPNAGS*WWRVLG
Trigger: TCCCAACACCCGCCACCAGCAGGATCCAGCATTCGG...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGATGATCCACTGGGGATaGGCCTGGATGAAACGGTTC +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLMIHWG*AWMKRF
Trigger: GAACCGTTTCATCCAGGCCCATCCCCAGTGGATCAT...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395851.5
CDS-3UTR CCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAATTCGCCCCCGGGGTGTaGCTTGCTCTCTTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQFAPGV*LALFPQ
Trigger: CTGAGGAAAGAGAGCAAGCCACACCCCGGGGGCGAA...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAATTCGCCCCCGGGGTGTaGCTTGCTCTCTTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKFAPGV*LALFPQ
Trigger: CTGAGGAAAGAGAGCAAGCCACACCCCGGGGGCGAA...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp ATAAACATGCAGTGGAAAACTGGCTGTCAGAATACTTTTATGAAGAGTATTAGGTGGCGGTGGCAGAGGTaGTGGGGGCTCTTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: INMQWKTGCQNTFMKSIRWRWQR*WGLFSS
Trigger: GCTACTGAAGAGCCCCCACCACCTCTGCCACCGCCA...CCTAATACTCTTCATAAAAGTATTCTGACAGCCAGTTTTCCACTGCATGTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAGTGCAGTTTCCGTGGTaGGCTCAAGCTCAACCGCAG +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQVQFPW*AQAQPQ
Trigger: CTGCGGTTGAGCTTGAGCCCACCACGGAAACTGCAC...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTATGGGTGCAGTTTCCGTaGTGGGCTCAAGCTCAACCG +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLWVQFP*WAQAQP
Trigger: CGGTTGAGCTTGAGCCCACCACGGAAACTGCACCCA...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCAGGAGGGAGATGTACTaGGTGCAGTTTCCGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIRREMY*VQFPWW
Trigger: CCACCACGGAAACTGCACCCAGTACATCTCCCTCCT...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGAGCTTTGGTAGCGGGTaGGGGATCACAAACAGAACC +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRSFGSG*GITNRT
Trigger: GGTTCTGTTTGTGATCCCCCACCCGCTACCAAAGCT...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCCGCTGCACGTGGCACTaGAATCATTGTCTGACTGGG +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIRCTWH*NHCLTG
Trigger: CCCAGTCAGACAATGATTCCAGTGCCACGTGCAGCG...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCCACTGGGGTTCCAATTaGTATGTTACATGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAHWGSN*YVTWGA
Trigger: TGCACCCCATGTAACATACCAATTGGAACCCCAGTG...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACAGTTATCACTTGATGTaGAGCAGGCTGAAGGACTTC +
Preference number: 4 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHSYHLM*SRLKDF
Trigger: GAAGTCCTTCAGCCTGCTCCACATCAAGTGATAACT...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATGATGAGAGGGGGCGGTaGCCTGGTTGGTCGAGTTGT +
Preference number: 4 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNDERGR*PGWSSC
Trigger: ACAACTCGACCAACCAGGCCACCGCCCCCTCTCATC...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATTGGGCATTCTCGAAATaGACCCCTTCACCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNWAFSK*TPSPKP
Trigger: AGGCTTTGGTGAAGGGGTCCATTTCGAGAATGCCCA...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGGTGTGCCCTGGGAAATaGAACCCTCAATTATCGGCC +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRVCPGK*NPQLSA
Trigger: GGCCGATAATTGAGGGTTCCATTTCCCAGGGCACAC...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGGGCTCAGTTGTGCTTTaGGAGCTTCATGCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRGSVVL*ELHAVW
Trigger: CCACACTGCATGAAGCTCCCAAAGCACAACTGAGCC...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGGGGATACTTTCCCTCTaGGTAGGGGTCAGTGTCGAT +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRGILSL*VGVSVD
Trigger: ATCGACACTGACCCCTACCCAGAGGGAAAGTATCCC...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCACTGGAGACTTCGCTaGGATACTTTCCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLHWRLR*DTFPLG
Trigger: ACCCAGAGGGAAAGTATCCCAGCGAAGTCTCCAGTG...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGGTCCACCCCAGGCACTaGAGACTTCGCTGGGATACT +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRVHPRH*RLRWDT
Trigger: AGTATCCCAGCGAAGTCTCCAGTGCCTGGGGTGGAC...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAGTCCACCCCAGGCACTaGAGACTTCGCTGGGATACT +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQVHPRH*RLRWDT
Trigger: AGTATCCCAGCGAAGTCTCCAGTGCCTGGGGTGGAC...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATCAGTGGCTGCTCTCTTaGGGAGAGTCCTCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNQWLLS*GESSGH
Trigger: GTGGCCAGAGGACTCTCCCCAAGAGAGCAGCCACTG...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGGTATGGGAGACCCAGTaGCTGCTCTCTTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRVWETQ*LLSWGE
Trigger: CTCTCCCCAAGAGAGCAGCCACTGGGTCTCCCATAC...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTAGTATGGGAGACCCAGTaGCTGCTCTCTTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLVWETQ*LLSWGE
Trigger: CTCTCCCCAAGAGAGCAGCCACTGGGTCTCCCATAC...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTATCTCGTTGCTGGGTATaGGAGACCCAGTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLSRCWV*ETQWLL
Trigger: GAGCAGCCACTGGGTCTCCCATACCCAGCAACGAGA...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACGTTCCATTGGTTCCTTaGAAAACACTGGGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHVPLVP*KTLGLC
Trigger: ACAGAGACCCAGTGTTTTCCAAGGAACCAATGGAAC...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTAGGGGGCAGCTGTTGTTaGGGAGATGGTGATTCCTGC +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLGGSCC*GDGDSC
Trigger: GCAGGAATCACCATCTCCCCAACAACAGCTGCCCCC...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAATTCCCAGGCCCACCCTaGCGTCTGCCTATGGTAATC +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQFPGPP*RLPMVI
Trigger: GATTACCATAGGCAGACGCCAGGGTGGGCCTGGGAA...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTGCAATCGGTGTTGGTaGAGTACTGCTGAGCATCCG +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRCNRCW*STAEHP
Trigger: CGGATGCTCAGCAGTACTCCACCAACACCGATTGCA...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
3UTR CAA 72 bp GTATACAGGAGTGGAACAGGGACAGGAGTGAAAGCTTaGACTGAAGACAAATGTGGGCTTATGGCCTATCTC +
Preference number: 4 (lower is better)
Translates to: VYRSGTGTGVKA*TEDKCGLMAYL
Trigger: GAGATAGGCCATAAGCCCACATTTGTCTTCAGTCAAAGCTTTCACTCCTGTCCCTGTTCCACTCCTGTATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCACCTGGTTTGTCTTaGTGTTCTCATGGTACACCT +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYASPGLS*CSHGTP
Trigger: AGGTGTACCATGAGAACATCAAGACAAACCAGGTGA...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTATCTCCCATGCCTCCATaGGCTGATCATAACGCTGGC +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLSPMPP*ADHNAG
Trigger: GCCAGCGTTATGATCAGCTCATGGAGGCATGGGAGA...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAACCTAGCAATGGTGGCTaGAAGACCAGCTCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQPSNGG*KTSSPL
Trigger: CAGAGGGGAGCTGGTCTTTCAGCCACCATTGCTAGG...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR TCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGCTGCTGTCTCAGCACTaGTGCTGTCATTCACCTGGG +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRLLSQH*CCHSPG
Trigger: CCCAGGTGAATGACAGCATCAGTGCTGAGACAGCAG...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTAACAGCAGCTCGATGCTaGAGCTGTGGCAGATCCAGT +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLTAARC*SCGRSS
Trigger: ACTGGATCTGCCACAGCTTCAGCATCGAGCTGCTGT...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAGCCTGGTGTTCCCTGTaGGATGGAGCCTCCCATTAT +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQAWCSL*DGASHY
Trigger: ATAATGGGAGGCTCCATCTCACAGGGAACACCAGGC...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTCAGACCCTCAGGTTGTaGGTTTTGGCTTCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFQTLRL*VLASGR
Trigger: TCTCCCCGAAGCCAAAACTCACAACCTGAGGGTCTG...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGCTCCTGCGGTACCTCTaGCTACACCTTCATGTTGGG +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRLLRYL*LHLHVG
Trigger: CCCAACATGAAGGTGTAGTCAGAGGTACCGCAGGAG...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACAGGAGACTCCCTCATTaGCATCCCTTGCTTTATATT +
Preference number: 4 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHRRLPH*HPLLYI
Trigger: AATATAAAGCAAGGGATGTCAATGAGGGAGTCTCCT...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCATACAGTCCTTTCTTTaGGGTCAGAATGAGGACTCC +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAIQSFL*GQNEDS
Trigger: GGAGTCCTCATTCTGACCTCAAAGAAAGGACTGTAT...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGCAGTGCTGCCTCTGTaGTGGGGATCAAACGGACTG +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKAVLPL*WGSNGL
Trigger: CAGTCCGTTTGATCCCCATCACAGAGGCAGCACTGC...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGCTCCTGAGTTCTTACTaGAGGGGAAGGGGAGCGAAC +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRLLSSY*RGRGAN
Trigger: GTTCGCTCCCCTTCCCCTTCAGTAAGAACTCAGGAG...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATTGCAACATGGTCTCCTaGGTTCTTACTGAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNCNMVS*VLTEGE
Trigger: TTCCCCTTCAGTAAGAACTCAGGAGACCATGTTGCA...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGTTGTTGGGGAGATGGTaGTTCCTGCTGTGGTCGATA +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLLLGRW*FLLWSI
Trigger: TATCGACCACAGCAGGAATCACCATCTCCCCAACAA...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTGGCTCCGAAGAGACGTaGCTCCTCTCTGGGGATTTT +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFGSEET*LLSGDF
Trigger: AAAATCCCCAGAGAGGAGTCACGTCTCTTCGGAGCC...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTAGCTTATACTCCCTGGTaGGCGGGCATCATTCCTCTG +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLAYTPW*AGIIPL
Trigger: CAGAGGAATGATGCCCGCTCACCAGGGAGTATAAGC...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTAACCACTGGTCACAACTaGGGTGTTGGCAGTACCAGG +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLTTGHN*GVGSTR
Trigger: CCTGGTACTGCCAACACCTCAGTTGTGACCAGTGGT...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAATGTACAGAGGAGACTaGAGAGGGCCGTTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQMYRGD*RGPFRS
Trigger: GGAACGGAACGGCCCTCTTCAGTCTCCTCTGTACAT...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp TTCCTCATCACCTGGTTTGTCTTGATGTTCTCATGGTACACCTTGGTATCTGATTGTTGCTGCTGCTGTTaGTGCAAAAGCTGTGATGCC +
Preference number: 4 (lower is better)
Translates to: FLITWFVLMFSWYTLVSDCCCCC*CKSCDA
Trigger: GGCATCACAGCTTTTGCAGCAACAGCAGCAGCAACA...ATCAGATACCAAGGTGTACCATGAGAACATCAAGACAAACCAGGTGATGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR GCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGCGAAGCTGTTGCTGCTaGTGTTGCTGCAAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRRSCCC*CCCKSC
Trigger: ACAGCTTTTGCAGCAACAGCAGCAGCAACAGCTTCG...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395851.5
CDS-3UTR GCA 90 bp TTCCTCATCACCTGGTTTGTCTTGATGTTCTCATGGTACACCTTGGTATCTGATCGAAGCTGTTGCTGCTaGTGTTGCTGCAAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: FLITWFVLMFSWYTLVSDRSCCC*CCCKSC
Trigger: ACAGCTTTTGCAGCAACAGCAGCAGCAACAGCTTCG...ATCAGATACCAAGGTGTACCATGAGAACATCAAGACAAACCAGGTGATGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR GCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGATCCTTCTTAGCATCTaGAGAAGCCCTCAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLILLSI*RSPQPF
Trigger: GAAGGGCTGAGGGCTTCTGCAGATGCTAAGAAGGAT...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395851.5
CDS-3UTR GCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACTCTACTTTTTCTTCTTaGGAGGGTCGAGCAATTTGC +
Preference number: 4 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHSTFSS*EGRAIC
Trigger: GCAAATTGCTCGACCCTCGCAAGAAGAAAAAGTAGA...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp ATTCCAGTGAATCATGATCCACTGGGGATGGGCCTGGATGAAACGGTTCATAACTCTACTTTTTCTTCTTaGGAGGGTCGAGCAATTTGC +
Preference number: 4 (lower is better)
Translates to: IPVNHDPLGMGLDETVHNSTFSS*EGRAIC
Trigger: GCAAATTGCTCGACCCTCGCAAGAAGAAAAAGTAGA...GTTATGAACCGTTTCATCCAGGCCCATCCCCAGTGGATCATGATTCACTGGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR GCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAACCCCGGGGTGTGGCTTaGTCTCTTTCCTCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQPRGVA*SLSSVS
Trigger: AGAAACTGAGGAAAGAGAGCAAGCCACACCCCGGGG...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGGCTCTTGGTGTCCCCTaGATTATGGAGCCAGACAAT +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLALGVP*IMEPDN
Trigger: ATTGTCTGGCTCCATAATGCAGGGGACACCAAGAGC...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCAATGGCACCTTCAAATaGTCGTATGGGAGGACTTTC +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYANGTFK*SYGRTF
Trigger: GAAAGTCCTCCCATACGAGCATTTGAAGGTGCCATT...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp ATAAACATGCAGTGGAAAACTGGCTGTCAGAATACTTTTATGAAGAGTATTAGGCTTACCACTGACGTGTaGCGGGAACGCACGGTCTCG +
Preference number: 4 (lower is better)
Translates to: INMQWKTGCQNTFMKSIRLTTDV*RERTVS
Trigger: CGAGACCGTGCGTTCCCGGCACACGTCAGTGGTAAG...CCTAATACTCTTCATAAAAGTATTCTGACAGCCAGTTTTCCACTGCATGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR GCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGGCTTTGGGAGCTTCATaGAGTGTGGACCTAAGAACG +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRALGAS*SVDLRT
Trigger: CGTTCTTAGGTCCACACTGCATGAAGCTCCCAAAGC...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTCCCAGGGCTCAGTTGTaGTTTGGGAGCTTCATGCAG +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFPRAQL*FGSFMQ
Trigger: CTGCATGAAGCTCCCAAAGCACAACTGAGCCCTGGG...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAAACCTCGCCTGCAGTaGTGCCTCTGTGATGGGGAT +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQKPRLQ*CLCDGD
Trigger: ATCCCCATCACAGAGGCAGCACTGCAGGCGAGGTTT...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTCCGATAAACCTCGCCTaGAGTGCTGCCTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFPINLA*SAASVM
Trigger: CATCACAGAGGCAGCACTGCAGGCGAGGTTTATCGG...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTACCGATAAACCTCGCCTaGAGTGCTGCCTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLPINLA*SAASVM
Trigger: CATCACAGAGGCAGCACTGCAGGCGAGGTTTATCGG...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAACAGGTAAGCAGCCGCTaGAGGATCCAAAGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIEQVSSR*RIQSPV
Trigger: CACAGGGCTTTGGATCCTGCAGCGGCTGCTTACCTG...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR GCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTATGTCCATGGGAGGAGTaGTTGTTCCCCCTGGATGAG +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLCPWEE*LFPLDE
Trigger: CTCATCCAGGGGGAACAAGCACTCCTCCCATGGACA...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAATGTCCATGGGAGGAGTaGTTGTTCCCCCTGGATGAG +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQCPWEE*LFPLDE
Trigger: CTCATCCAGGGGGAACAAGCACTCCTCCCATGGACA...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTAAGCACTTGCAGCAGCTaGAAGGTGTGTTGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLSTCSS*KVCWVS
Trigger: GGACACCCAACACACCTTGCAGCTGCTGCAAGTGCT...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp ATAAACATGCAGTGGAAAACTGGCTGTCAGAATACTTTTATGAAGAGTATTAGGGAGGTCGGAGGAAGCTaGAGCAATCCGTTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: INMQWKTGCQNTFMKSIREVGGS*SNPFPL
Trigger: GAGCGGGAACGGATTGCTGCAGCTTCCTCCGACCTC...CCTAATACTCTTCATAAAAGTATTCTGACAGCCAGTTTTCCACTGCATGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR GCA 90 bp CTCCAGGTGATGGTAAATAAAGTAATACGCACATGCATTATGATGAGGATGGAGGAACATATCCATGACTaGCAGGTCGGCCAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: LQVMVNKVIRTCIMMRMEEHIHD*QVGQAV
Trigger: AACAGCCTGGCCGACCTGGCAGTCATGGATATGTTC...CTCCATCCTCATCATAATGCATGTGCGTATTACTTTATTTACCATCACCTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR GCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAACACATCCATCTGGGGTaGAGAAGCTGCAGCATCCAC +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQHIHLG*RSCSIH
Trigger: GTGGATGCTGCAGCTTCTGCACCCCAGATGGATGTG...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACGTCTATGAAGTTAGCTaGAGTAATGGTAGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHVYEVS*SNGSLP
Trigger: GGGAAGACTACCATTACTGCAGCTAACTTCATAGAC...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTGTAGAAGTAGGAGGCTaGTGGGGAGTCTGCGAGGAA +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFVEVGG*WGVCEE
Trigger: TTCCTCGCAGACTCCCCAGCAGCCTCCTACTTCTAC...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAATCCTGGCTGAGCAGCTaGCATATCAGAGTCACCTCC +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQSWLSS*HIRVTS
Trigger: GGAGGTGACTCTGATATGGCAGCTGCTCAGCCAGGA...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTACGCAGAGGGAGCACATaGAATCGGTGTTGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLRRGST*NRCWWS
Trigger: ACTCCACCAACACCGATTGCATGTGCTCCCTCTGCG...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTACTGCGAACTCCTGCTaGTGGCGGGTGTTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFTANSC*WRVLGN
Trigger: ATTTCCCAACACCCGCCACCAGCAGGAGTTCGCAGT...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395851.5
CDS-3UTR CCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGCACTGGGGATGGGCCTaGATGAAACGGTTCATAACT +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRHWGWA*MKRFIT
Trigger: AGTTATGAACCGTTTCATCCAGGCCCATCCCCAGTG...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395851.5
CDS-3UTR CCA 90 bp ATTCCAGTGAATCATGATCCACTGGGGATGGGCCTGGATGAAACGGTTCATAACTCTCATGGTACACCTTaGTATCTGATGGCTGGTTAT +
Preference number: 4 (lower is better)
Translates to: IPVNHDPLGMGLDETVHNSHGTP*YLMAGY
Trigger: ATAACCAGCCATCAGATACCAAGGTGTACCATGAGA...GTTATGAACCGTTTCATCCAGGCCCATCCCCAGTGGATCATGATTCACTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR CCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCATCAAACATCATAGGTaGAATCACAGAGAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAIKHHR*NHRELP
Trigger: CGGCAGCTCTCTGTGATTCCACCTATGATGTTTGAT...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCCCTGAGCAGAAACAGTaGAAGCGACACTTTCACATT +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAPEQKQ*KRHFHI
Trigger: AATGTGAAAGTGTCGCTTCCACTGTTTCTGCTCAGG...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGTGCAGTTTCCGTGGTaGGCTCAAGCTCAACCGCAG +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKVQFPW*AQAQPQ
Trigger: CTGCGGTTGAGCTTGAGCCCACCACGGAAACTGCAC...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAGTGCAGTTTCCGTGGTaGGCTCAAGCTCAACCGCAG +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQVQFPW*AQAQPQ
Trigger: CTGCGGTTGAGCTTGAGCCCACCACGGAAACTGCAC...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAATGGGTGCAGTTTCCGTaGTGGGCTCAAGCTCAACCG +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQWVQFP*WAQAQP
Trigger: CGGTTGAGCTTGAGCCCACCACGGAAACTGCACCCA...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTAGGAGGGAGATGTACTaGGTGCAGTTTCCGTGGTGG +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFRREMY*VQFPWW
Trigger: CCACCACGGAAACTGCACCCAGTACATCTCCCTCCT...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCATGCTGTCATTCACCTaGGTCTCCACACTTTCATCT +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAMLSFT*VSTLSS
Trigger: AGATGAAAGTGTGGAGACCCAGGTGAATGACAGCAT...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAAGCTTTGGTAGCGGGTaGGGGATCACAAACAGAACC +
Preference number: 4 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVISFGSG*GITNRT
Trigger: GGTTCTGTTTGTGATCCCCCACCCGCTACCAAAGCT...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCGTTCCACCTTCTCACTaGCTCTATCCAAGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAVPPSH*LYPSLF
Trigger: AAAGAGACTTGGATAGAGCCAGTGAGAAGGTGGAAC...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTGAATCATTGTCTGACTaGGGCTCGGGCCTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFESLSD*GSGLWA
Trigger: TGCCCAAAGGCCCGAGCCCCAGTCAGACAATGATTC...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGTCGATGCTGAAGCTGTaGCAGATCCAGTGGATTTGG +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLSMLKL*QIQWIW
Trigger: CCAAATCCACTGGATCTGCCACAGCTTCAGCATCGA...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATAGCATAGCCGCTCACTaGGGTTCCAATTGGTATGTT +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNSIAAH*GSNWYV
Trigger: AACATACCAATTGGAACCCCAGTGAGCGGCTATGCT...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACCTTGGATGTGCCACATaGACTTGTAGAACTTCTACA +
Preference number: 4 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHLGCAT*TCRTST
Trigger: TGTAGAAGTTCTACAAGTCCATGTGGCACATCCAAG...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGCACCAAAGCCTCTGTTaGTATGCCAGTCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRHQSLC*YASLGQ
Trigger: CTGCCCCAGACTGGCATACCAACAGAGGCTTTGGTG...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATGACTGCTGTCTTCAATaGGCATTCTCGAAATGGACC +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNDCCLQ*AFSKWT
Trigger: GGTCCATTTCGAGAATGCCCATTGAAGACAGCAGTC...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATTTCATGAGCTGTTCTTaGACTCCTAGTCCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNFMSCS*TPSPFS
Trigger: CGAGAAGGGACTAGGAGTCCAAGAACAGCTCATGAA...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGAATGAGGACTCCCCCTaGGTAATGCTCGGCATATCA +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRNEDSP*VMLGIS
Trigger: TGATATGCCGAGCATTACCCAGGGGGAGTCCTCATT...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGGTGTCCCCTGCATTATaGAGCCAGACAATACAGTCC +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRVSPAL*SQTIQS
Trigger: GGACTGTATTGTCTGGCTCCATAATGCAGGGGACAC...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTCCAGGTGATGGTAAATAAAGTAATACGCACATGCATTATGATGAGGATGGAGATCGGCCGTGTGCTCTaGACCACTTCTGGAGTTTTC +
Preference number: 4 (lower is better)
Translates to: LQVMVNKVIRTCIMMRMEIGRVL*TTSGVF
Trigger: GAAAACTCCAGAAGTGGTCCAGAGCACACGGCCGAT...CTCCATCCTCATCATAATGCATGTGCGTATTACTTTATTTACCATCACCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCATCGGCCGTGTGCTCTaGACCACTTCTGGAGTTTTC +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIIGRVL*TTSGVF
Trigger: GAAAACTCCAGAAGTGGTCCAGAGCACACGGCCGAT...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp CTCCAGGTGATGGTAAATAAAGTAATACGCACATGCATTATGATGAGGATGGAGGTGTGCCCTGGGAAATaGAACCCTCAATTATCGGCC +
Preference number: 4 (lower is better)
Translates to: LQVMVNKVIRTCIMMRMEVCPGK*NPQLSA
Trigger: GGCCGATAATTGAGGGTTCCATTTCCCAGGGCACAC...CTCCATCCTCATCATAATGCATGTGCGTATTACTTTATTTACCATCACCTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCGGGTCCTCCGTGCACTaGTGTCATCATAAATCCCAG +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIGSSVH*CHHKSQ
Trigger: CTGGGATTTATGATGACACCAGTGCACGGAGGACCC...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCATGGGTGAGCCTCTaGACATGGTGTTTTGATAAC +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYASWVSL*TWCFDN
Trigger: GTTATCAAAACACCATGTCCAGAGGCTCACCCATGA...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCCACTGGAGACTTCGCTaGGATACTTTCCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIHWRLR*DTFPLG
Trigger: ACCCAGAGGGAAAGTATCCCAGCGAAGTCTCCAGTG...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGATCAAACGGACTGTaGCTCACGACAGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKGSNGL*LTTGST
Trigger: GGTGGACCCTGTCGTGAGCCACAGTCCGTTTGATCC...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAACTGGATCCAAGTGCGTaGGCAGGTGGCTCCGATAAA +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQLDPSA*AGGSDK
Trigger: TTTATCGGAGCCACCTGCCCACGCACTTGGATCCAG...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGTATGGGAGACCCAGTaGCTGCTCTCTTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKVWETQ*LLSWGE
Trigger: CTCTCCCCAAGAGAGCAGCCACTGGGTCTCCCATAC...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAATCTCGTTGCTGGGTATaGGAGACCCAGTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKSRCWV*ETQWLL
Trigger: GAGCAGCCACTGGGTCTCCCATACCCAGCAACGAGA...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTGATTCCTCTCGTTGCTaGGTATGGGAGACCCAGTGG +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFDSSRC*VWETQW
Trigger: CCACTGGGTCTCCCATACCCAGCAACGAGAGGAATC...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTGGTGTCCTGGAGACATaGAAGCAGAGTTGTACGGCC +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFGVLET*KQSCTA
Trigger: GGCCGTACAACTCTGCTTCCATGTCTCCAGGACACC...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGGTGGCGCAGGTGAGCTaGCAGGACTTATCACCTCAA +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRVAQVS*QDLSPQ
Trigger: TTGAGGTGATAAGTCCTGCCAGCTCACCTGCGCCAC...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAGGACTGATCTCCTTTACTGATTGGTCTAAATTCAAAAGTGAATTGGTTAAAGTCTGCAGTTTCTCCTaGGGTGGCGCAGGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: GGLISFTDWSKFKSELVKVCSFS*GGAGEL
Trigger: CAGCTCACCTGCGCCACCCCAGGAGAAACTGCAGAC...TTTAACCAATTCACTTTTGAATTTAGACCAATCAGTAAAGGAGATCAGTCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAGAAGTAGGAGGCTGCTaGGGAGTCTGCGAGGAAACT +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQEVGGC*GVCEET
Trigger: AGTTTCCTCGCAGACTCCCCAGCAGCCTCCTACTTC...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCGACGTGACTCCTCTCTaGGGATTTTCCAGGCCTACT +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIDVTPL*GFSRPT
Trigger: AGTAGGCCTGGAAAATCCCCAGAGAGGAGTCACGTC...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCGGATCAGCAAAAGAATaGCCTCTAGAGCTAACTGAG +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAGSAKE*PLELTE
Trigger: CTCAGTTAGCTCTAGAGGCCATTCTTTTGCTGATCC...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGTCACAACTGAGGTGTTaGCAGTACCAGGCACTACTC +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLSQLRC*QYQALL
Trigger: GAGTAGTGCCTGGTACTGCCAACACCTCAGTTGTGA...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACAGTGAGAGTAAATGCTaGTCCATAGTGATGGGGAAA +
Preference number: 4 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHSESKC*SIVMGK
Trigger: TTTCCCCATCACTATGGACCAGCATTTACTCTCACT...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAATTTGCCTCCGAATGCTaGATCCTGCTGGTGGCGGGT +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQFASEC*ILLVAG
Trigger: ACCCGCCACCAGCAGGATCCAGCATTCGGAGGCAAA...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR TCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGTTGCTGCAAAAGCTGTaGTGCCTGACTCACTTCAAG +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLLLQKL*CLTHFK
Trigger: CTTGAAGTGAGTCAGGCATCACAGCTTTTGCAGCAA...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395851.5
CDS-3UTR TCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAACTAGTTCTCCTTTCTTaGGGCCTGTCAGAACCTGGG +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQLVLLS*GLSEPG
Trigger: CCCAGGTTCTGACAGGCCTCAAGAAAGGAGAACTAG...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395851.5
CDS-3UTR TCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGGCAAAACCGCAGCACTaGCACGCTGAAAATGAGAAT +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLAKPQH*HAENEN
Trigger: ATTCTCATTTTCAGCGTGTCAGTGCTGCGGTTTTGC...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395851.5
CDS-3UTR TCA 90 bp TTCCTCATCACCTGGTTTGTCTTGATGTTCTCATGGTACACCTTGGTATCTGATGCAAAACCGCAGCACTaGCACGCTGAAAATGAGAAT +
Preference number: 4 (lower is better)
Translates to: FLITWFVLMFSWYTLVSDAKPQH*HAENEN
Trigger: ATTCTCATTTTCAGCGTGTCAGTGCTGCGGTTTTGC...ATCAGATACCAAGGTGTACCATGAGAACATCAAGACAAACCAGGTGATGAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR TCA 90 bp TTCCTCATCACCTGGTTTGTCTTGATGTTCTCATGGTACACCTTGGTATCTGATGTACACCTTGGTATCTaGTGGCTGGTTATACAGTGG +
Preference number: 4 (lower is better)
Translates to: FLITWFVLMFSWYTLVSDVHLGI*WLVIQW
Trigger: CCACTGTATAACCAGCCATCAGATACCAAGGTGTAC...ATCAGATACCAAGGTGTACCATGAGAACATCAAGACAAACCAGGTGATGAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR TCA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATTCTCCCATGCCTCCATaGGCTGATCATAACGCTGGC +
Preference number: 4 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNSPMPP*ADHNAG
Trigger: GCCAGCGTTATGATCAGCTCATGGAGGCATGGGAGA...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAATCTCCCATGCCTCCATaGGCTGATCATAACGCTGGC +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQSPMPP*ADHNAG
Trigger: GCCAGCGTTATGATCAGCTCATGGAGGCATGGGAGA...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR TCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAACTGCTGTCTCAGCACTaGTGCTGTCATTCACCTGGG +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQLLSQH*CCHSPG
Trigger: CCCAGGTGAATGACAGCATCAGTGCTGAGACAGCAG...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR TCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAACTGGAATCATTGTCTaGCTGGGGCTCGGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQTGIIV*LGLGPL
Trigger: CAAAGGCCCGAGCCCCAGTCAGACAATGATTCCAGT...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR TCA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATACTGGAATCATTGTCTaGCTGGGGCTCGGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNTGIIV*LGLGPL
Trigger: CAAAGGCCCGAGCCCCAGTCAGACAATGATTCCAGT...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAACAGCAGCTCGATGCTaGAGCTGTGGCAGATCCAGT +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQTAARC*SCGRSS
Trigger: ACTGGATCTGCCACAGCTTCAGCATCGAGCTGCTGT...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR TCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCTCCTCCAGGAGTGCTaGCTCATGCATTGCTTTAAT +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLLLQEC*LMHCFN
Trigger: ATTAAAGCAATGCATGAGTCAGCACTCCTGGAGGAG...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGCCTGGTGTTCCCTGTaGGATGGAGCCTCCCATTAT +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKAWCSL*DGASHY
Trigger: ATAATGGGAGGCTCCATCTCACAGGGAACACCAGGC...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCAGAGATAGATCCCACTaGCGGCTTGGGTGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIRDRSH*RLGCFL
Trigger: CAAGAAACACCCAAGCCGTCAGTGGGATCTATCTCT...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATCTTCATGTTGGGCCCTaGCCAACAGACCCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNLHVGP*PTDPQV
Trigger: AACCTGAGGGTCTGTTGGTCAGGGCCCAACATGAAG...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAACTTCATGTTGGGCCCTaGCCAACAGACCCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIELHVGP*PTDPQV
Trigger: AACCTGAGGGTCTGTTGGTCAGGGCCCAACATGAAG...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATTGGAATGCTCTCCACTaGAATTTTGCTGGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNWNALH*NFAGWS
Trigger: ACTCCAACCAGCAAAATTTCAGTGGAGAGCATTCCA...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTGCCTTGGAATCTCATaGATGGAACGCCCCATTTCT +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRCLGIS*MERPIS
Trigger: AGAAATGGGGCGTTCCATTCATGAGATTCCAAGGCA...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACGATGGCAGATTGACCTaGGTTGTTGTCAAACTTTAT +
Preference number: 4 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHDGRLT*VVVKLY
Trigger: ATAAAGTTTGACAACAACTCAGGTCAATCTGCCATC...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTGTTTGATGGCAGATTaGCCTGAGTTGTTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYACLMAD*PELLSN
Trigger: GTTTGACAACAACTCAGGTCAATCTGCCATCAAACA...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGGTAACCTGGAGTTGGTaGAAGCTGTCTCTGAAACAG +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLVTWSW*KLSLKQ
Trigger: CTGTTTCAGAGACAGCTTTCACCAACTCCAGGTTAC...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGTATTGGTCAGGTCAATaGTTCCTCTCGTTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLYWSGQ*FLSLLG
Trigger: ACCCAGCAACGAGAGGAATCATTGACCTGACCAATA...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp CTCCAGGTGATGGTAAATAAAGTAATACGCACATGCATTATGATGAGGATGGAGGGCATGATTCGTAGCTaGGCAGTTGGATCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: LQVMVNKVIRTCIMMRMEGMIRS*AVGSKG
Trigger: ACCTTTGGATCCAACTGCTCAGCTACGAATCATGCC...CTCCATCCTCATCATAATGCATGTGCGTATTACTTTATTTACCATCACCTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR TCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTGAAGAGTCTGAACTTTaGGAGCCACGTTCCCTCGCA +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFEESEL*EPRSLA
Trigger: TGCGAGGGAACGTGGCTCTCAAAGTTCAGACTCTTC...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTACCAAAGCAGAAGGTaGGTTCTGGAATGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAYQSRR*VLECRS
Trigger: ACTTCTACATTCCAGAACTCACCTTCTGCTTTGGTA...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAAGCTTATACTCCCTGGTaGGCGGGCATCATTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIEAYTPW*AGIIPL
Trigger: CAGAGGAATGATGCCCGCTCACCAGGGAGTATAAGC...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAATCCTGTTCTGTTGGTaGGGAGCTGCTTGGTTCACC +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQILFCW*GAAWFT
Trigger: GGTGAACCAAGCAGCTCCTCACCAACAGAACAGGAT...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTAGTGGGCTGGCTCTCCTaGAAAGTCTCAGGGAATAAG +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLVGWLS*KVSGNK
Trigger: CTTATTCCCTGAGACTTTTCAGGAGAGCCAGCCCAC...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAACGATAATCAGGGACTaGGAACTCCTGCTGGTGGCG +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKTIIRD*ELLLVA
Trigger: CGCCACCAGCAGGAGTTCGCAGTCCCTGATTATCGT...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395851.5
CDS-3UTR GCA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATATGTTGCTGCTGCTGTTaGTGCAAAAGCTGTGATGCC +
Preference number: 4 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVICCCCC*CKSCDA
Trigger: GGCATCACAGCTTTTGCAGCAACAGCAGCAGCAACA...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR GCA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAACCTTCTGGCAGCGGGTaGACTAAAGGCAAAACCGCA +
Preference number: 4 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIEPSGSG*TKGKTA
Trigger: TGCGGTTTTGCCTTTAGTGCACCCGCTGCCAGAAGG...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR GCA 90 bp ATAAGCCCATTCATGTTAATGAACTTGACTCGTCTTTGTTCTGCATCAAACATCCCTTCTGGCAGCGGGTaGACTAAAGGCAAAACCGCA +
Preference number: 4 (lower is better)
Translates to: ISPFMLMNLTRLCSASNIPSGSG*TKGKTA
Trigger: TGCGGTTTTGCCTTTAGTGCACCCGCTGCCAGAAGG...GATGTTTGATGCAGAACAAAGACGAGTCAAGTTCATTAACATGAATGGGCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR GCA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAATCCTTCTTAGCATCTaGAGAAGCCCTCAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVIILLSI*RSPQPF
Trigger: GAAGGGCTGAGGGCTTCTGCAGATGCTAAGAAGGAT...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR GCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCTCAGGAGGTTTAGCTaGCTCTTCTTCAAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLLRRFS*LFFKLL
Trigger: CAACAGCTTGAAGAAGAGGCAGCTAAACCTCCTGAG...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAATACTGCGGTGTTTCTaGTCCACAGGAGGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQILRCF*STGGGD
Trigger: GTCCCCTCCTCCTGTGGAGCAGAAACACCGCAGTAT...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR GCA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAAATACTGCGGTGTTTCTaGTCCACAGGAGGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIEILRCF*STGGGD
Trigger: GTCCCCTCCTCCTGTGGAGCAGAAACACCGCAGTAT...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCGACTCGTCTTTGTTCTaGATCAAACATCATAGGTGG +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYADSSLF*IKHHRW
Trigger: CCACCTATGATGTTTGATGCAGAACAAAGACGAGTC...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTGAGGGTCGAGCAATTTaGTGGTTTCTGCCTCTGCGT +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFEGRAI*WFLPLR
Trigger: ACGCAGAGGCAGAAACCAGCAAATTGCTCGACCCTC...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAACCCCGGGGTGTGGCTTaGTCTCTTTCCTCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQPRGVA*SLSSVS
Trigger: AGAAACTGAGGAAAGAGAGCAAGCCACACCCCGGGG...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR GCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAATGCAGCACTGGCAGCTaGAGCTTCGTTTGTCATGGA +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQCSTGS*SFVCHG
Trigger: TCCATGACAAACGAAGCTGCAGCTGCCAGTGCTGCA...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCCATTTTAGCAATTGCTaGCCAGTTACGACCATGTTC +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAHFSNC*PVTTMF
Trigger: GAACATGGTCGTAACTGGGCAGCAATTGCTAAAATG...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCACCTTCAACTTTAGATaGATGGTTTTCTGGCACCCT +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYATFNFR*MVFWHP
Trigger: AGGGTGCCAGAAAACCATGCATCTAAAGTTGAAGGT...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTACATCCTCATCAGCGCTaGACGTGGCACTGGAATCAT +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLHPHQR*TWHWNH
Trigger: ATGATTCCAGTGCCACGTGCAGCGCTGATGAGGATG...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGCATCCTCATCAGCGCTaGACGTGGCACTGGAATCAT +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRHPHQR*TWHWNH
Trigger: ATGATTCCAGTGCCACGTGCAGCGCTGATGAGGATG...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATAGGAGTGCTGACTCATaGATTGCTTTAATGTGTCGC +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNRSADS*IALMCR
Trigger: GCGACACATTAAAGCAATGCATGAGTCAGCACTCCT...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTTTGGCAGATTCCTGTTaGCGTGGCAGTCCAAGAGAG +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFLADSC*RGSPRE
Trigger: CTCTCTTGGACTGCCACGGCAACAGGAATCTGCCAA...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTTGGCAGATTCCTGTTaGCGTGGCAGTCCAAGAGAG +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRLADSC*RGSPRE
Trigger: CTCTCTTGGACTGCCACGGCAACAGGAATCTGCCAA...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTATTGGCAGATTCCTGTTaGCGTGGCAGTCCAAGAGAG +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLLADSC*RGSPRE
Trigger: CTCTCTTGGACTGCCACGGCAACAGGAATCTGCCAA...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATATTCTTGTATGGCTCCTaGGGTACCTCTGACTACACC +
Preference number: 4 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVIFLYGS*GTSDYT
Trigger: GGTGTAGTCAGAGGTACCGCAGGAGCCATACAAGAA...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTCTCCACTGAAATTTTaGTGGTTGGAGTTCCCCGAG +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRSPLKF*WLEFPE
Trigger: CTCGGGGAACTCCAACCAGCAAAATTTCAGTGGAGA...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGTCTCCACTGAAATTTTaGTGGTTGGAGTTCCCCGAG +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLSPLKF*WLEFPE
Trigger: CTCGGGGAACTCCAACCAGCAAAATTTCAGTGGAGA...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATAAAGCTTTCAGTTGTTaGTCTTGGTGTCCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNKAFSC*SWCPLH
Trigger: ATGCAGGGGACACCAAGAGCAACAACTGAAAGCTTT...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTACAATTATCGGCCGTGTaGTCTGGACCACTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLQLSAV*SGPLLE
Trigger: CTCCAGAAGTGGTCCAGAGCACACGGCCGATAATTG...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGCAATTATCGGCCGTGTaGTCTGGACCACTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRQLSAV*SGPLLE
Trigger: CTCCAGAAGTGGTCCAGAGCACACGGCCGATAATTG...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGACGCACGGTCTCGCCTaGTTTCACATCCTCATATTT +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLTHGLA*FHILIF
Trigger: AAATATGAGGATGTGAAAGCAGGCGAGACCGTGCGT...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAAAGCACTTGCAGCAGCTaGAAGGTGTGTTGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIESTCSS*KVCWVS
Trigger: GGACACCCAACACACCTTGCAGCTGCTGCAAGTGCT...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTTTCCCTCTCAGCACTTaGAGCAGCTGCAAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFFPLST*SSCKVC
Trigger: ACACACCTTGCAGCTGCTGCAAGTGCTGAGAGGGAA...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTAGAACATATCCATGACTaGCAGGTCGGCCAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLEHIHD*QVGQAV
Trigger: AACAGCCTGGCCGACCTGGCAGTCATGGATATGTTC...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATCACATCCATCTGGGGTaGAGAAGCTGCAGCATCCAC +
Preference number: 4 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNHIHLG*RSCSIH
Trigger: GTGGATGCTGCAGCTTCTGCACCCCAGATGGATGTG...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCACCTCCAGGGTTTTCTaGTCTAGCTGCTGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLITSRVF*SSCCCS
Trigger: TGAACAGCAGCAGCTAGAGCAGAAAACCCTGGAGGT...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCATTTTCCGCTTGATTTaGCTTAACAACCTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAIFRLI*LNNLWL
Trigger: CAGCCAGAGGTTGTTAAGGCAAATCAAGCGGAAAAT...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGCTGTCCTGTTTCTCATaGACAACCGGAACCTGGGGT +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRLSCFS*TTGTWG
Trigger: ACCCCAGGTTCCGGTTGTGCATGAGAAACAGGACAG...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTAAGAAGGGGTTGGTCTTaGTATCTTGGGTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLRRGWS*YLGWQR
Trigger: CCTCTGCCACCCAAGATAGCAAGACCAACCCCTTCT...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAATGTTTGCCTCCGAATaGTGGATCCTGCTGGTGGCG +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQMFASE*WILLVA
Trigger: CGCCACCAGCAGGATCCAGCATTCGGAGGCAAACAT...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR GCA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATATGTTTGCCTCCGAATaGTGGATCCTGCTGGTGGCG +
Preference number: 4 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNMFASE*WILLVA
Trigger: CGCCACCAGCAGGATCCAGCATTCGGAGGCAAACAT...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395857.7
CDS-3UTR CCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAACTGCGAACTCCTGCTaGTGGCGGGTGTTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKTANSC*WRVLGN
Trigger: ATTTCCCAACACCCGCCACCAGCAGGAGTTCGCAGT...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395851.5
CDS-3UTR CCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTATGATCCACTGGGGATaGGCCTGGATGAAACGGTTC +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFMIHWG*AWMKRF
Trigger: GAACCGTTTCATCCAGGCCCATCCCCAGTGGATCAT...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395851.5
CDS-3UTR CCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTTTGCCTCCGAATGCTaGATCCTTCTTAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRFASEC*ILLSIC
Trigger: GCAGATGCTAAGAAGGATCCAGCATTCGGAGGCAAA...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395851.5
CDS-3UTR CCA 90 bp ATTCCAGTGAATCATGATCCACTGGGGATGGGCCTGGATGAAACGGTTCATAACGTCTTGATGTTCTCATaGTACACCTTGGTATCTGAT +
Preference number: 4 (lower is better)
Translates to: IPVNHDPLGMGLDETVHNVLMFS*YTLVSD
Trigger: ATCAGATACCAAGGTGTACCATGAGAACATCAAGAC...GTTATGAACCGTTTCATCCAGGCCCATCCCCAGTGGATCATGATTCACTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR CCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAAGGAGGGAGATGTACTaGGTGCAGTTTCCGTGGTGG +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQRREMY*VQFPWW
Trigger: CCACCACGGAAACTGCACCCAGTACATCTCCCTCCT...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATATGCTGTCATTCACCTaGGTCTCCACACTTTCATCT +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNMLSFT*VSTLSS
Trigger: AGATGAAAGTGTGGAGACCCAGGTGAATGACAGCAT...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATGAATCATTGTCTGACTaGGGCTCGGGCCTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNESLSD*GSGLWA
Trigger: TGCCCAAAGGCCCGAGCCCCAGTCAGACAATGATTC...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAGAATCATTGTCTGACTaGGGCTCGGGCCTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQESLSD*GSGLWA
Trigger: TGCCCAAAGGCCCGAGCCCCAGTCAGACAATGATTC...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAACGCTGCACGTGGCACTaGAATCATTGTCTGACTGGG +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQRCTWH*NHCLTG
Trigger: CCCAGTCAGACAATGATTCCAGTGCCACGTGCAGCG...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAACGCTGCACGTGGCACTaGAATCATTGTCTGACTGGG +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKRCTWH*NHCLTG
Trigger: CCCAGTCAGACAATGATTCCAGTGCCACGTGCAGCG...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAACATCAGCGCTGCACGTaGCACTGGAATCATTGTCTG +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQHQRCT*HWNHCL
Trigger: CAGACAATGATTCCAGTGCCACGTGCAGCGCTGATG...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGGGTGCAGGATACCATTaGTGGGATAACAGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRGAGYH*WDNSSS
Trigger: CGAGCTGCTGTTATCCCACCAATGGTATCCTGCACC...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTTCCCACTCTCTGTTTaGACTCTTGGATGTGCCACA +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRFPLSV*TLGCAT
Trigger: TGTGGCACATCCAAGAGTCCAAACAGAGAGTGGGAA...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGAGATTCCTGTTGCCGTaGCAGTCCAAGAGAGATAGA +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLRFLLP*QSKRDR
Trigger: TCTATCTCTCTTGGACTGCCACGGCAACAGGAATCT...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTAACTACACCTTCATGTTaGGCCCTGACCAACAGACCC +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLTTPSC*ALTNRP
Trigger: GGGTCTGTTGGTCAGGGCCCAACATGAAGGTGTAGT...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTACTACACCTTCATGTTaGGCCCTGACCAACAGACCC +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFTTPSC*ALTNRP
Trigger: GGGTCTGTTGGTCAGGGCCCAACATGAAGGTGTAGT...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAACACCAAAGCCTCTGTTaGTATGCCAGTCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKHQSLC*YASLGQ
Trigger: CTGCCCCAGACTGGCATACCAACAGAGGCTTTGGTG...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATATGGGCATTCTCGAAATaGACCCCTTCACCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVIWAFSK*TPSPKP
Trigger: AGGCTTTGGTGAAGGGGTCCATTTCGAGAATGCCCA...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCGTGTCCCCTGCATTATaGAGCCAGACAATACAGTCC +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIVSPAL*SQTIQS
Trigger: GGACTGTATTGTCTGGCTCCATAATGCAGGGGACAC...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATTTCAGTTGTTGCTCTTaGTGTCCCCTGCATTATGGA +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNFSCCS*CPLHYG
Trigger: TCCATAATGCAGGGGACACCAAGAGCAACAACTGAA...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGCTCTGGACCACTTCTaGAGTTTTCCGACTTTCCTG +
Preference number: 4 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVIALDHF*SFPTFL
Trigger: CAGGAAAGTCGGAAAACTCCAGAAGTGGTCCAGAGC...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGATCGGCCGTGTGCTCTaGACCACTTCTGGAGTTTTC +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRIGRVL*TTSGVF
Trigger: GAAAACTCCAGAAGTGGTCCAGAGCACACGGCCGAT...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGGTGTGCCCTGGGAAATaGAACCCTCAATTATCGGCC +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRVCPGK*NPQLSA
Trigger: GGCCGATAATTGAGGGTTCCATTTCCCAGGGCACAC...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGGGCTCAGTTGTGCTTTaGGAGCTTCATGCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRGSVVL*ELHAVW
Trigger: CCACACTGCATGAAGCTCCCAAAGCACAACTGAGCC...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTGGGTCCTCCGTGCACTaGTGTCATCATAAATCCCAG +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFGSSVH*CHHKSQ
Trigger: CTGGGATTTATGATGACACCAGTGCACGGAGGACCC...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATGTGAAAAGGCATGGCTaGATCCAAGTGCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNVKRHG*IQVRGQ
Trigger: CTGCCCACGCACTTGGATCCAGCCATGCCTTTTCAC...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAACCCTGTGAAAAGGCATaGCTGGATCCAAGTGCGTGG +
Preference number: 4 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIEPCEKA*LDPSAW
Trigger: CCACGCACTTGGATCCAGCCATGCCTTTTCACAGGG...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATATCCTCTGGCCACATCTaGACGCAAGTTCACTTGCAT +
Preference number: 4 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVISSGHI*TQVHLH
Trigger: ATGCAAGTGAACTTGCGTCCAGATGTGGCCAGAGGA...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAATTGGGGAGAGTCCTCTaGCCACATCTGGACGCAAGT +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKLGRVL*PHLDAS
Trigger: ACTTGCGTCCAGATGTGGCCAGAGGACTCTCCCCAA...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAGGACTGATCTCCTTTACTGATTGGTCTAAATTCAAAAGTGAATTGGTTAAATCTCGTTGCTGGGTATaGGAGACCCAGTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GGLISFTDWSKFKSELVKSRCWV*ETQWLL
Trigger: GAGCAGCCACTGGGTCTCCCATACCCAGCAACGAGA...TTTAACCAATTCACTTTTGAATTTAGACCAATCAGTAAAGGAGATCAGTCCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CCA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATGGTGTCCTGGAGACATaGAAGCAGAGTTGTACGGCC +
Preference number: 4 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNGVLET*KQSCTA
Trigger: GGCCGTACAACTCTGCTTCCATGTCTCCAGGACACC...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp CTCCAGGTGATGGTAAATAAAGTAATACGCACATGCATTATGATGAGGATGGAGGTGTGTTGGGTGTCCTaGAGACATGGAAGCAGAGTT +
Preference number: 4 (lower is better)
Translates to: LQVMVNKVIRTCIMMRMEVCWVS*RHGSRV
Trigger: AACTCTGCTTCCATGTCTCCAGGACACCCAACACAC...CTCCATCCTCATCATAATGCATGTGCGTATTACTTTATTTACCATCACCTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATGTCTCTGTTGCAACATaGTCTCCTGAGTTCTTACTG +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNVSVAT*SPEFLL
Trigger: CAGTAAGAACTCAGGAGACCATGTTGCAACAGAGAC...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATGTTCCATTGGTTCCTTaGAAAACACTGGGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNVPLVP*KTLGLC
Trigger: ACAGAGACCCAGTGTTTTCCAAGGAACCAATGGAAC...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTTGGACACATCCATCTaGGGTGCAGAAGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRLDTSI*GAEAAA
Trigger: TGCTGCAGCTTCTGCACCCCAGATGGATGTGTCCAA...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATGAAGTAGGAGGCTGCTaGGGAGTCTGCGAGGAAACT +
Preference number: 4 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNEVGGC*GVCEET
Trigger: AGTTTCCTCGCAGACTCCCCAGCAGCCTCCTACTTC...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTGACGTGACTCCTCTCTaGGGATTTTCCAGGCCTACT +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFDVTPL*GFSRPT
Trigger: AGTAGGCCTGGAAAATCCCCAGAGAGGAGTCACGTC...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTTCGTGTCTCACCACTaGTCACAACTGAGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIFVSHH*SQLRCW
Trigger: CCAACACCTCAGTTGTGACCAGTGGTGAGACACGAA...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAGGACTGATCTCCTTTACTGATTGGTCTAAATTCAAAAGTGAATTGGTTAAATTCCCAGGCCCACCCTaGCGTCTGCCTATGGTAATC +
Preference number: 4 (lower is better)
Translates to: GGLISFTDWSKFKSELVKFPGPP*RLPMVI
Trigger: GATTACCATAGGCAGACGCCAGGGTGGGCCTGGGAA...TTTAACCAATTCACTTTTGAATTTAGACCAATCAGTAAAGGAGATCAGTCCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATGTGATAGGAGGGTCTTaGTCAGTAGCTAATCACAGA +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNVIGGS*SVANHR
Trigger: TCTGTGATTAGCTACTGACCAAGACCCTCCTATCAC...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGTCAGGTATACAGGAGTaGAACAGGGACAGGAGTGAA +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLSGIQE*NRDRSE
Trigger: TTCACTCCTGTCCCTGTTCCACTCCTGTATACCTGA...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACAAATCCATGTATAAGTaGACCCACACAGTTCAAACC +
Preference number: 4 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHKSMYK*THTVQT
Trigger: GGTTTGAACTGTGTGGGTCCACTTATACATGGATTT...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
3UTR CAA 72 bp ATCATCATGAAGGTCTTCATCCTTGTCATCTTCATGTaGAATAGGCTGAGGATGAGAAGGGGTTGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: IIMKVFILVIFM*NRLRMRRGWSC
Trigger: GCAAGACCAACCCCTTCTCATCCTCAGCCTATTCAACATGAAGATGACAAGGATGAAGACCTTCATGATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
3UTR CAA 72 bp AAATCATCCACAGTGACTCAGCTCATGGTCTCGTTGTaGGAAACACTAGGAGTTTTCAGGACAGTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: KSSTVTQLMVSL*ETLGVFRTVSS
Trigger: TGAAGAGACTGTCCTGAAAACTCCTAGTGTTTCCAACAACGAGACCATGAGCTGAGTCACTGTGGATGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR TCA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATATTGCTGCAAAAGCTGTaGTGCCTGACTCACTTCAAG +
Preference number: 4 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVILLQKL*CLTHFK
Trigger: CTTGAAGTGAGTCAGGCATCACAGCTTTTGCAGCAA...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR TCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCTGTCAGAACCTGGGTaGAATTCTGAAAGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLLSEPG*NSESKE
Trigger: TTCCTTGCTTTCAGAATTTCACCCAGGTTCTGACAG...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395851.5
CDS-3UTR TCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGATTCCAGTGAATCATaGTCCACTGGGGATGGGCCT +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKDSSES*STGDGP
Trigger: AGGCCCATCCCCAGTGGATCATGATTCACTGGAATC...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395851.5
CDS-3UTR TCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCGCAAAACCGCAGCACTaGCACGCTGAAAATGAGAAT +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIAKPQH*HAENEN
Trigger: ATTCTCATTTTCAGCGTGTCAGTGCTGCGGTTTTGC...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR TCA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATACTCTGCCCAACTCGCTaGAATCTTTCTTGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVILCPTR*NLSCCS
Trigger: AGAACAGCAAGAAAGATTTCAGCGAGTTGGGCAGAG...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCCCATAATTCCTTCTaGCGAGGGCTTTATAATTCT +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYASHNSF*RGLYNS
Trigger: AGAATTATAAAGCCCTCGTCAGAAGGAATTATGGGA...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAATATCTTCATCCTCCTaGGCAGAAACAGTGGAAGCG +
Preference number: 4 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVIISSSS*AETVEA
Trigger: CGCTTCCACTGTTTCTGCTCAGGAGGATGAAGATAT...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAGCACTGTGCTCCTGCTaGTCTACATCCATCTGCTCT +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQALCSC*STSICS
Trigger: AGAGCAGATGGATGTAGATCAGCAGGAGCACAGTGC...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR TCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTGGAATGCTCTCCACTaGAATTTTGCTGGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRWNALH*NFAGWS
Trigger: ACTCCAACCAGCAAAATTTCAGTGGAGAGCATTCCA...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTATCTTTGAGGTCAGAATaGGGACTCCCCCTGGGTAAT +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLSLRSE*GLPLGN
Trigger: ATTACCCAGGGGGAGTCCTCATTCTGACCTCAAAGA...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTATTGGTCAGGTCAATaGTTCCTCTCGTTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIYWSGQ*FLSLLG
Trigger: ACCCAGCAACGAGAGGAATCATTGACCTGACCAATA...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp GGAGGACTGATCTCCTTTACTGATTGGTCTAAATTCAAAAGTGAATTGGTTAAACTCCTGAGTTCTTACTaGAGGGGAAGGGGAGCGAAC +
Preference number: 4 (lower is better)
Translates to: GGLISFTDWSKFKSELVKLLSSY*RGRGAN
Trigger: GTTCGCTCCCCTTCCCCTTCAGTAAGAACTCAGGAG...TTTAACCAATTCACTTTTGAATTTAGACCAATCAGTAAAGGAGATCAGTCCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR TCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGTTGGATCCAAAGGTGTaGTTACACTGGTTCCATTGG +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLLDPKV*LHWFHW
Trigger: CCAATGGAACCAGTGTAATCACACCTTTGGATCCAA...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAGGCATGATTCGTAGCTaGGCAGTTGGATCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQGMIRS*AVGSKG
Trigger: ACCTTTGGATCCAACTGCTCAGCTACGAATCATGCC...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTGACAGCTTCAACTGGTaGAGGAGAAGGAGCACTTTC +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFDSFNW*RRRSTF
Trigger: GAAAGTGCTCCTTCTCCTTCACCAGTTGAAGCTGTC...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTAGACAGCTTCAACTGGTaGAGGAGAAGGAGCACTTTC +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLDSFNW*RRRSTF
Trigger: GAAAGTGCTCCTTCTCCTTCACCAGTTGAAGCTGTC...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAATTGCAAACTCCTGAATaGGGTGATGGGTCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKLQTPE*GDGSPS
Trigger: GGAAGGGGACCCATCACCTCATTCAGGAGTTTGCAA...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395857.7
CDS-3UTR GCA 90 bp ATAAACATGCAGTGGAAAACTGGCTGTCAGAATACTTTTATGAAGAGTATTAGGACGATAATCAGGGACTaGGAACTCCTGCTGGTGGCG +
Preference number: 4 (lower is better)
Translates to: INMQWKTGCQNTFMKSIRTIIRD*ELLLVA
Trigger: CGCCACCAGCAGGAGTTCGCAGTCCCTGATTATCGT...CCTAATACTCTTCATAAAAGTATTCTGACAGCCAGTTTTCCACTGCATGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR GCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAACTTCGAAGCTGTTGCTaGTGCTGTTGCTGCAAAAGC +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQLRSCC*CCCCKS
Trigger: GCTTTTGCAGCAACAGCAGCAGCAACAGCTTCGAAG...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395851.5
CDS-3UTR GCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAGAGGGTCGAGCAATTTaGTGGTTTCTGCCTCTGCGT +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQEGRAI*WFLPLR
Trigger: ACGCAGAGGCAGAAACCAGCAAATTGCTCGACCCTC...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR GCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGAGGGTCGAGCAATTTaGTGGTTTCTGCCTCTGCGT +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKEGRAI*WFLPLR
Trigger: ACGCAGAGGCAGAAACCAGCAAATTGCTCGACCCTC...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATGAGGGTCGAGCAATTTaGTGGTTTCTGCCTCTGCGT +
Preference number: 4 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNEGRAI*WFLPLR
Trigger: ACGCAGAGGCAGAAACCAGCAAATTGCTCGACCCTC...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAATGCAGCACTGGCAGCTaGAGCTTCGTTTGTCATGGA +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQCSTGS*SFVCHG
Trigger: TCCATGACAAACGAAGCTGCAGCTGCCAGTGCTGCA...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR GCA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACGAAGTTTTCTGTTTATaGTGCTGTAAGAGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHEVFCL*CCKRLS
Trigger: TGACAACCTCTTACAGCAGCATAAACAGAAAACTTC...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATCATCCTCATCAGCGCTaGACGTGGCACTGGAATCAT +
Preference number: 4 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNHPHQR*TWHWNH
Trigger: ATGATTCCAGTGCCACGTGCAGCGCTGATGAGGATG...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAACATCCTCATCAGCGCTaGACGTGGCACTGGAATCAT +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQHPHQR*TWHWNH
Trigger: ATGATTCCAGTGCCACGTGCAGCGCTGATGAGGATG...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR GCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTATGCAGCTTCCTCTCTaGCTTTCTCAGGACTGCTGT +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFMQLPL*LSQDCC
Trigger: ACAGCAGTCCTGAGAAAGGCAGAGAGGAAGCTGCAT...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAGCTCTTGGTGTCCCCTaGATTATGGAGCCAGACAAT +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQALGVP*IMEPDN
Trigger: ATTGTCTGGCTCCATAATGCAGGGGACACCAAGAGC...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTGCTTTGGGAGCTTCATaGAGTGTGGACCTAAGAACG +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFALGAS*SVDLRT
Trigger: CGTTCTTAGGTCCACACTGCATGAAGCTCCCAAAGC...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTACACAGGGGTCCTCCGTaGACTGGTGTCATCATAAAT +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLHRGPP*TGVIIN
Trigger: ATTTATGATGACACCAGTGCACGGAGGACCCCTGTG...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAATGATTCCTCTCGTTaGTGGGTATGGGAGACCCAG +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQNDSSR*WVWETQ
Trigger: CTGGGTCTCCCATACCCAGCAACGAGAGGAATCATT...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGAATGATTCCTCTCGTTaGTGGGTATGGGAGACCCAG +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRNDSSR*WVWETQ
Trigger: CTGGGTCTCCCATACCCAGCAACGAGAGGAATCATT...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAATTCCCTCTCAGCACTTaGAGCAGCTGCAAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIEFPLST*SSCKVC
Trigger: ACACACCTTGCAGCTGCTGCAAGTGCTGAGAGGGAA...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAAGAACATATCCATGACTaGCAGGTCGGCCAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIEEHIHD*QVGQAV
Trigger: AACAGCCTGGCCGACCTGGCAGTCATGGATATGTTC...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGGTTTTCTGCTCTAGCTaGTGCTGTTCACTAACTGCT +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLVFCSS*CCSLTA
Trigger: AGCAGTTAGTGAACAGCAGCAGCTAGAGCAGAAAAC...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTACCTCCAGGGTTTTCTaGTCTAGCTGCTGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFTSRVF*SSCCCS
Trigger: TGAACAGCAGCAGCTAGAGCAGAAAACCCTGGAGGT...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp ATAAGCCCATTCATGTTAATGAACTTGACTCGTCTTTGTTCTGCATCAAACATCATGATCCACTGGGGATaGGCCTGGATGAAACGGTTC +
Preference number: 4 (lower is better)
Translates to: ISPFMLMNLTRLCSASNIMIHWG*AWMKRF
Trigger: GAACCGTTTCATCCAGGCCCATCCCCAGTGGATCAT...GATGTTTGATGCAGAACAAAGACGAGTCAAGTTCATTAACATGAATGGGCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR CCA 90 bp CTCCAGGTGATGGTAAATAAAGTAATACGCACATGCATTATGATGAGGATGGAGTTTGCCTCCGAATGCTaGATCCTTCTTAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: LQVMVNKVIRTCIMMRMEFASEC*ILLSIC
Trigger: GCAGATGCTAAGAAGGATCCAGCATTCGGAGGCAAA...CTCCATCCTCATCATAATGCATGTGCGTATTACTTTATTTACCATCACCTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTGGTCGAGCAATTTGCTaGTTTCTGCCTCTGCGTTTC +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFGRAIC*FLPLRF
Trigger: GAAACGCAGAGGCAGAAACCAGCAAATTGCTCGACC...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTAGGTCGAGCAATTTGCTaGTTTCTGCCTCTGCGTTTC +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLGRAIC*FLPLRF
Trigger: GAAACGCAGAGGCAGAAACCAGCAAATTGCTCGACC...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAAGCTTTGGTAGCGGGTaGGGGATCACAAACAGAACC +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQSFGSG*GITNRT
Trigger: GGTTCTGTTTGTGATCCCCCACCCGCTACCAAAGCT...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCAGATGCATGGTTTTCTaGCACCCTCACTTCAACGTC +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIRCMVF*HPHFNV
Trigger: GACGTTGAAGTGAGGGTGCCAGAAAACCATGCATCT...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGGTTCCACCTTCTCACTaGCTCTATCCAAGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRVPPSH*LYPSLF
Trigger: AAAGAGACTTGGATAGAGCCAGTGAGAAGGTGGAAC...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAACATCAGCGCTGCACGTaGCACTGGAATCATTGTCTG +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQHQRCT*HWNHCL
Trigger: CAGACAATGATTCCAGTGCCACGTGCAGCGCTGATG...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCGATGCTGAAGCTGTaGCAGATCCAGTGGATTTGG +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRSMLKL*QIQWIW
Trigger: CCAAATCCACTGGATCTGCCACAGCTTCAGCATCGA...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAAGGTGCAGGATACCATTaGTGGGATAACAGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIEGAGYH*WDNSSS
Trigger: CGAGCTGCTGTTATCCCACCAATGGTATCCTGCACC...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAGGTGCAGGATACCATTaGTGGGATAACAGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQGAGYH*WDNSSS
Trigger: CGAGCTGCTGTTATCCCACCAATGGTATCCTGCACC...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATAATTGGTATGTTACATaGGGTGCAGGATACCATTGG +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNNWYVT*GAGYHW
Trigger: CCAATGGTATCCTGCACCCCATGTAACATACCAATT...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGAGTTATCACTTGATGTaGAGCAGGCTGAAGGACTTC +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLSYHLM*SRLKDF
Trigger: GAAGTCCTTCAGCCTGCTCCACATCAAGTGATAACT...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAATCCCACTGACGGCTTaGGTGTTTCTTGAGTGTAGG +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQIPLTA*VFLECR
Trigger: CCTACACTCAAGAAACACCCAAGCCGTCAGTGGGAT...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCCACTGAAATTTTGCTaGTTGGAGTTCCCCGAGTTA +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLPLKFC*LEFPEL
Trigger: TAACTCGGGGAACTCCAACCAGCAAAATTTCAGTGG...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTTCATGAGCTGTTCTTaGACTCCTAGTCCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIFMSCS*TPSPFS
Trigger: CGAGAAGGGACTAGGAGTCCAAGAACAGCTCATGAA...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTAATGAGGACTCCCCCTaGGTAATGCTCGGCATATCA +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFNEDSP*VMLGIS
Trigger: TGATATGCCGAGCATTACCCAGGGGGAGTCCTCATT...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAGTGTCCCCTGCATTATaGAGCCAGACAATACAGTCC +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQVSPAL*SQTIQS
Trigger: GGACTGTATTGTCTGGCTCCATAATGCAGGGGACAC...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTAGCTCTGGACCACTTCTaGAGTTTTCCGACTTTCCTG +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLALDHF*SFPTFL
Trigger: CAGGAAAGTCGGAAAACTCCAGAAGTGGTCCAGAGC...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGGCTCTGGACCACTTCTaGAGTTTTCCGACTTTCCTG +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRALDHF*SFPTFL
Trigger: CAGGAAAGTCGGAAAACTCCAGAAGTGGTCCAGAGC...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGCACTTTTATGTTCTCTaGCACAATTTCCAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRHFYVL*HNFQRR
Trigger: CCTCCGCTGGAAATTGTGCCAGAGAACATAAAAGTG...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGCTCAGTTGTGCTTTaGGAGCTTCATGCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKGSVVL*ELHAVW
Trigger: CCACACTGCATGAAGCTCCCAAAGCACAACTGAGCC...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGGTCCTCCGTGCACTaGTGTCATCATAAATCCCAG +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKGSSVH*CHHKSQ
Trigger: CTGGGATTTATGATGACACCAGTGCACGGAGGACCC...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGGTGAGCCTCTGGACATaGTGTTTTGATAACTCACAG +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLVSLWT*CFDNSQ
Trigger: CTGTGAGTTATCAAAACACCATGTCCAGAGGCTCAC...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTCATGGGTGAGCCTCTaGACATGGTGTTTTGATAAC +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRSWVSL*TWCFDN
Trigger: GTTATCAAAACACCATGTCCAGAGGCTCACCCATGA...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp ATAAACATGCAGTGGAAAACTGGCTGTCAGAATACTTTTATGAAGAGTATTAGGTTGGGGAGAGTCCTCTaGCCACATCTGGACGCAAGT +
Preference number: 4 (lower is better)
Translates to: INMQWKTGCQNTFMKSIRLGRVL*PHLDAS
Trigger: ACTTGCGTCCAGATGTGGCCAGAGGACTCTCCCCAA...CCTAATACTCTTCATAAAAGTATTCTGACAGCCAGTTTTCCACTGCATGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTAGTGTGTTGGGTGTCCTaGAGACATGGAAGCAGAGTT +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLVCWVS*RHGSRV
Trigger: AACTCTGCTTCCATGTCTCCAGGACACCCAACACAC...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATTTGGACACATCCATCTaGGGTGCAGAAGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNLDTSI*GAEAAA
Trigger: TGCTGCAGCTTCTGCACCCCAGATGGATGTGTCCAA...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAATTGGACACATCCATCTaGGGTGCAGAAGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKLDTSI*GAEAAA
Trigger: TGCTGCAGCTTCTGCACCCCAGATGGATGTGTCCAA...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTGCCTTAACAACCTCTaGCTGATAGGTCTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRCLNNL*LIGLQF
Trigger: AAACTGCAGACCTATCAGCCAGAGGTTGTTAAGGCA...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGCAGAAGGTGAGTTCTaGAATGTAGAAGTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVIAEGEF*NVEVGG
Trigger: GCCTCCTACTTCTACATTCCAGAACTCACCTTCTGC...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGGGATCAGCAAAAGAATaGCCTCTAGAGCTAACTGAG +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLGSAKE*PLELTE
Trigger: CTCAGTTAGCTCTAGAGGCCATTCTTTTGCTGATCC...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTTCGTGTCTCACCACTaGTCACAACTGAGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRFVSHH*SQLRCW
Trigger: CCAACACCTCAGTTGTGACCAGTGGTGAGACACGAA...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAATGCAATCGGTGTTGGTaGAGTACTGCTGAGCATCCG +
Preference number: 4 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIECNRCW*STAEHP
Trigger: CGGATGCTCAGCAGTACTCCACCAACACCGATTGCA...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATCTTTCCAGTTACCAGTaGCATTCTCCCAAAACTGTT +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNLSSYQ*HSPKTV
Trigger: AACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGGTGATAGGAGGGTCTTaGTCAGTAGCTAATCACAGA +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLVIGGS*SVANHR
Trigger: TCTGTGATTAGCTACTGACCAAGACCCTCCTATCAC...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
3UTR CAA 72 bp TTTAAATCATCCACAGTGACTCAGCTCATGGTCTCGTaGTTGGAAACACTAGGAGTTTTCAGGACAGTCTCT +
Preference number: 4 (lower is better)
Translates to: FKSSTVTQLMVS*LETLGVFRTVS
Trigger: AGAGACTGTCCTGAAAACTCCTAGTGTTTCCAACAACGAGACCATGAGCTGAGTCACTGTGGATGATTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR TCA 90 bp CTCCAGGTGATGGTAAATAAAGTAATACGCACATGCATTATGATGAGGATGGAGCTGTCAGAACCTGGGTaGAATTCTGAAAGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: LQVMVNKVIRTCIMMRMELSEPG*NSESKE
Trigger: TTCCTTGCTTTCAGAATTTCACCCAGGTTCTGACAG...CTCCATCCTCATCATAATGCATGTGCGTATTACTTTATTTACCATCACCTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR TCA 90 bp ATAAACATGCAGTGGAAAACTGGCTGTCAGAATACTTTTATGAAGAGTATTAGGCTAGTTCTCCTTTCTTaGGGCCTGTCAGAACCTGGG +
Preference number: 4 (lower is better)
Translates to: INMQWKTGCQNTFMKSIRLVLLS*GLSEPG
Trigger: CCCAGGTTCTGACAGGCCTCAAGAAAGGAGAACTAG...CCTAATACTCTTCATAAAAGTATTCTGACAGCCAGTTTTCCACTGCATGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR TCA 90 bp GGAGGACTGATCTCCTTTACTGATTGGTCTAAATTCAAAAGTGAATTGGTTAAAGATTCCAGTGAATCATaGTCCACTGGGGATGGGCCT +
Preference number: 4 (lower is better)
Translates to: GGLISFTDWSKFKSELVKDSSES*STGDGP
Trigger: AGGCCCATCCCCAGTGGATCATGATTCACTGGAATC...TTTAACCAATTCACTTTTGAATTTAGACCAATCAGTAAAGGAGATCAGTCCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR TCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTGTACACCTTGGTATCTaGTGGCTGGTTATACAGTGG +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFVHLGI*WLVIQW
Trigger: CCACTGTATAACCAGCCATCAGATACCAAGGTGTAC...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATATCACCTGGTTTGTCTTaGTGTTCTCATGGTACACCT +
Preference number: 4 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVISPGLS*CSHGTP
Trigger: AGGTGTACCATGAGAACATCAAGACAAACCAGGTGA...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATTCCCATAATTCCTTCTaGCGAGGGCTTTATAATTCT +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNSHNSF*RGLYNS
Trigger: AGAATTATAAAGCCCTCGTCAGAAGGAATTATGGGA...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTAGCGACACTTTCACATTaGGACACATCTCGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLATLSH*DTSRSS
Trigger: TGAAGAGCGAGATGTGTCTCAATGTGAAAGTGTCGC...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAATATCTTCATCCTCCTaGGCAGAAACAGTGGAAGCG +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQISSSS*AETVEA
Trigger: CGCTTCCACTGTTTCTGCTCAGGAGGATGAAGATAT...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTCTCCTCCAGGAGTGCTaGCTCATGCATTGCTTTAAT +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFLLQEC*LMHCFN
Trigger: ATTAAAGCAATGCATGAGTCAGCACTCCTGGAGGAG...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAAGAGATAGATCCCACTaGCGGCTTGGGTGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKRDRSH*RLGCFL
Trigger: CAAGAAACACCCAAGCCGTCAGTGGGATCTATCTCT...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTTTAAACTGATTTCATaGGCTGTTCTTGGACTCCTA +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAFKLIS*AVLGLL
Trigger: TAGGAGTCCAAGAACAGCTCATGAAATCAGTTTAAA...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAATCTTTGAGGTCAGAATaGGGACTCCCCCTGGGTAAT +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKSLRSE*GLPLGN
Trigger: ATTACCCAGGGGGAGTCCTCATTCTGACCTCAAAGA...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTATGCCTTGGAATCTCATaGATGGAACGCCCCATTTCT +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLCLGIS*MERPIS
Trigger: AGAAATGGGGCGTTCCATTCATGAGATTCCAAGGCA...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTAGTAACCTGGAGTTGGTaGAAGCTGTCTCTGAAACAG +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLVTWSW*KLSLKQ
Trigger: CTGTTTCAGAGACAGCTTTCACCAACTCCAGGTTAC...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTTGCAACATGGTCTCCTaGGTTCTTACTGAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFCNMVS*VLTEGE
Trigger: TTCCCCTTCAGTAAGAACTCAGGAGACCATGTTGCA...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAAGGCATGATTCGTAGCTaGGCAGTTGGATCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIEGMIRS*AVGSKG
Trigger: ACCTTTGGATCCAACTGCTCAGCTACGAATCATGCC...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGGGATCATTTTCCGCTTaGTTTGCCTTAACAACCTCT +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRGSFSA*FALTTS
Trigger: AGAGGTTGTTAAGGCAAATCAAGCGGAAAATGATCC...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGGGATCATTTTCCGCTTaGTTTGCCTTAACAACCTCT +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLGSFSA*FALTTS
Trigger: AGAGGTTGTTAAGGCAAATCAAGCGGAAAATGATCC...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAATTGTTGGGGAGATGGTaGTTCCTGCTGTGGTCGATA +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKLLGRW*FLLWSI
Trigger: TATCGACCACAGCAGGAATCACCATCTCCCCAACAA...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGTACCAAAGCAGAAGGTaGGTTCTGGAATGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLYQSRR*VLECRS
Trigger: ACTTCTACATTCCAGAACTCACCTTCTGCTTTGGTA...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTACCAAAGCAGAAGGTaGGTTCTGGAATGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRYQSRR*VLECRS
Trigger: ACTTCTACATTCCAGAACTCACCTTCTGCTTTGGTA...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTTGGGCTGTAACGGTTTaGTGTTTTAGTCCTCACAGG +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFWAVTV*CFSPHR
Trigger: CCTGTGAGGACTAAAACATCAAACCGTTACAGCCCA...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTATGGGCTGTAACGGTTTaGTGTTTTAGTCCTCACAGG +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLWAVTV*CFSPHR
Trigger: CCTGTGAGGACTAAAACATCAAACCGTTACAGCCCA...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTGGGCTGTAACGGTTTaGTGTTTTAGTCCTCACAGG +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRWAVTV*CFSPHR
Trigger: CCTGTGAGGACTAAAACATCAAACCGTTACAGCCCA...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGGACATGACAACTCCATaGTCCTCAACTTTGTCATCA +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLDMTTP*SSTLSS
Trigger: TGATGACAAAGTTGAGGATCATGGAGTTGTCATGTC...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGGACATGACAACTCCATaGTCCTCAACTTTGTCATCA +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRDMTTP*SSTLSS
Trigger: TGATGACAAAGTTGAGGATCATGGAGTTGTCATGTC...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTGCTGTTTGACTTGCTaGTCAGCTTTGGTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRCCLTC*SALVCK
Trigger: TTTGCAAACCAAAGCTGATCAGCAAGTCAAACAGCA...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGTGCTGTTTGACTTGCTaGTCAGCTTTGGTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLCCLTC*SALVCK
Trigger: TTTGCAAACCAAAGCTGATCAGCAAGTCAAACAGCA...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCATTATTATAGTCCACTaGATTGCCTGTATCAAAGGC +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAIIIVH*IACIKG
Trigger: GCCTTTGATACAGGCAATTCAGTGGACTATAATAAT...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGAATCACCCCCAAAGTTaGTGCGCTGATTTGAACATA +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLNHPQS*CADLNI
Trigger: TATGTTCAAATCAGCGCATCAACTTTGGGGGTGATT...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGAAAGTACAATGCCCGTaGCAGCCAACATTATGTAAC +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLKVQCP*QPTLCN
Trigger: GTTACATAATGTTGGCTGTCACGGGCATTGTACTTT...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGGGACTGTGTTCACCATaGGTTTTTCAGGATGCAGCA +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRGLCSP*VFQDAA
Trigger: TGCTGCATCCTGAAAAACTCATGGTGAACACAGTCC...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAGACAGCTTCAACTGGTaGAGGAGAAGGAGCACTTTC +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQDSFNW*RRRSTF
Trigger: GAAAGTGCTCCTTCTCCTTCACCAGTTGAAGCTGTC...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR GCA 90 bp ATAAGCCCATTCATGTTAATGAACTTGACTCGTCTTTGTTCTGCATCAAACATCCTTCGAAGCTGTTGCTaGTGCTGTTGCTGCAAAAGC +
Preference number: 4 (lower is better)
Translates to: ISPFMLMNLTRLCSASNILRSCC*CCCCKS
Trigger: GCTTTTGCAGCAACAGCAGCAGCAACAGCTTCGAAG...GATGTTTGATGCAGAACAAAGACGAGTCAAGTTCATTAACATGAATGGGCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR GCA 90 bp ATAAGCCCATTCATGTTAATGAACTTGACTCGTCTTTGTTCTGCATCAAACATCATCCTTCTTAGCATCTaGAGAAGCCCTCAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: ISPFMLMNLTRLCSASNIILLSI*RSPQPF
Trigger: GAAGGGCTGAGGGCTTCTGCAGATGCTAAGAAGGAT...GATGTTTGATGCAGAACAAAGACGAGTCAAGTTCATTAACATGAATGGGCTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR GCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTAGCTGGTTTCTGCCTCTaGGTTTCCCATAATTCCTTC +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLAGFCL*VSHNSF
Trigger: GAAGGAATTATGGGAAACGCAGAGGCAGAAACCAGC...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGCAATTTGCTGGTTTCTaGCTCTGCGTTTCCCATAAT +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRQFAGF*LCVSHN
Trigger: ATTATGGGAAACGCAGAGGCAGAAACCAGCAAATTG...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGCATTTTAGCAATTGCTaGCCAGTTACGACCATGTTC +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRHFSNC*PVTTMF
Trigger: GAACATGGTCGTAACTGGGCAGCAATTGCTAAAATG...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATACACCATTTTAGCAATTaGTGCCCAGTTACGACCATG +
Preference number: 4 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVIHHFSN*CPVTTM
Trigger: CATGGTCGTAACTGGGCAGCAATTGCTAAAATGGTG...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCCACCATTTTAGCAATTaGTGCCCAGTTACGACCATG +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIHHFSN*CPVTTM
Trigger: CATGGTCGTAACTGGGCAGCAATTGCTAAAATGGTG...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGACCTTCAACTTTAGATaGATGGTTTTCTGGCACCCT +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLTFNFR*MVFWHP
Trigger: AGGGTGCCAGAAAACCATGCATCTAAAGTTGAAGGT...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAATAGGAAACATTCTCTaGCTCTCTGGCTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQIGNIL*LSGSPS
Trigger: GGATGGAGAGCCAGAGAGGCAGAGAATGTTTCCTAT...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGATAGGAAACATTCTCTaGCTCTCTGGCTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRIGNIL*LSGSPS
Trigger: GGATGGAGAGCCAGAGAGGCAGAGAATGTTTCCTAT...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTGTATGTTACATGGGGTaGAGGATACCATTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFVCYMG*RIPLVG
Trigger: TCCCACCAATGGTATCCTGCACCCCATGTAACATAC...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTAGTATGTTACATGGGGTaGAGGATACCATTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLVCYMG*RIPLVG
Trigger: TCCCACCAATGGTATCCTGCACCCCATGTAACATAC...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAGAAGTCAAATAAGTaGCTGGTGTTCCCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVIEKSNK*LVFPVR
Trigger: TCTCACAGGGAACACCAGGCACTTATTTGACTTCTC...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAATTCTTGTATGGCTCCTaGGGTACCTCTGACTACACC +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKFLYGS*GTSDYT
Trigger: GGTGTAGTCAGAGGTACCGCAGGAGCCATACAAGAA...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAACCCGTAGGGATGGAATaGTCTCCACTGAAATTTTGC +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQPVGME*SPLKFC
Trigger: GCAAAATTTCAGTGGAGAGCATTCCATCCCTACGGG...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAACATGGCCTTTGGATaGAGCTTCCTCTCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQNMAFG*SFLSAF
Trigger: AAAGGCAGAGAGGAAGCTGCATCCAAAGGCCATGTT...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp ATAAACATGCAGTGGAAAACTGGCTGTCAGAATACTTTTATGAAGAGTATTAGGCAATTATCGGCCGTGTaGTCTGGACCACTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: INMQWKTGCQNTFMKSIRQLSAV*SGPLLE
Trigger: CTCCAGAAGTGGTCCAGAGCACACGGCCGATAATTG...CCTAATACTCTTCATAAAAGTATTCTGACAGCCAGTTTTCCACTGCATGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR GCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAACGCACGGTCTCGCCTaGTTTCACATCCTCATATTT +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQTHGLA*FHILIF
Trigger: AAATATGAGGATGTGAAAGCAGGCGAGACCGTGCGT...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTTCTGCTCTAGCTGCTaGTGTTCACTAACTGCTGCT +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRFCSSC*CSLTAA
Trigger: AGCAGCAGTTAGTGAACAGCAGCAGCTAGAGCAGAA...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAATTGTCCGAGGCAATTTaGCGGGTGATGATCACGTCT +
Preference number: 4 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIELSEAI*RVMITS
Trigger: AGACGTGATCATCACCCGGCAAATTGCCTCGGACAA...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGATTTTCCGCTTGATTTaGCTTAACAACCTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRIFRLI*LNNLWL
Trigger: CAGCCAGAGGTTGTTAAGGCAAATCAAGCGGAAAAT...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCGTTCCCCTCACTTTGTaGAGTTCAGTCATCACTATC +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIVPLTL*SSVITI
Trigger: GATAGTGATGACTGAACTGCACAAAGTGAGGGGAAC...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGGTTAAATTACCAGTGTaGGTAACAGTGAGGTATGCC +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRVKLPV*VTVRYA
Trigger: GGCATACCTCACTGTTACGCACACTGGTAATTTAAC...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATACAAAGTGAGAGTAAATaGTGGTCCATAGTGATGGGG +
Preference number: 4 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVIQSESK*WSIVMG
Trigger: CCCCATCACTATGGACCAGCATTTACTCTCACTTTG...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGATCAGAACTATTTTCTaGACCTTCGCTGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLIRTIF*TFAVFW
Trigger: CCAGAAGACAGCGAAGGTGCAGAAAATAGTTCTGAT...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAACACTGGGGATGGGCCTaGATGAAACGGTTCATAACT +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKHWGWA*MKRFIT
Trigger: AGTTATGAACCGTTTCATCCAGGCCCATCCCCAGTG...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395851.5
CDS-3UTR CCA 90 bp ATAAGCCCATTCATGTTAATGAACTTGACTCGTCTTTGTTCTGCATCAAACATCCACTGGGGATGGGCCTaGATGAAACGGTTCATAACT +
Preference number: 4 (lower is better)
Translates to: ISPFMLMNLTRLCSASNIHWGWA*MKRFIT
Trigger: AGTTATGAACCGTTTCATCCAGGCCCATCCCCAGTG...GATGTTTGATGCAGAACAAAGACGAGTCAAGTTCATTAACATGAATGGGCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR CCA 90 bp TTCCTCATCACCTGGTTTGTCTTGATGTTCTCATGGTACACCTTGGTATCTGATTTGGTATCTGATGGCTaGTTATACAGTGGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: FLITWFVLMFSWYTLVSDLVSDG*LYSGSS
Trigger: TGAACTGCCACTGTATAACCAGCCATCAGATACCAA...ATCAGATACCAAGGTGTACCATGAGAACATCAAGACAAACCAGGTGATGAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR CCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGTCTCATGGTACACCTTaGTATCTGATGGCTGGTTAT +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLSHGTP*YLMAGY
Trigger: ATAACCAGCCATCAGATACCAAGGTGTACCATGAGA...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAGGTCGAGCAATTTGCTaGTTTCTGCCTCTGCGTTTC +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQGRAIC*FLPLRF
Trigger: GAAACGCAGAGGCAGAAACCAGCAAATTGCTCGACC...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTAGATGCATGGTTTTCTaGCACCCTCACTTCAACGTC +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFRCMVF*HPHFNV
Trigger: GACGTTGAAGTGAGGGTGCCAGAAAACCATGCATCT...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAATCGATGCTGAAGCTGTaGCAGATCCAGTGGATTTGG +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQSMLKL*QIQWIW
Trigger: CCAAATCCACTGGATCTGCCACAGCTTCAGCATCGA...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAGCAGGATACCATTGGTaGGATAACAGCAGCTCGATG +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQAGYHW*DNSSSM
Trigger: CATCGAGCTGCTGTTATCCCACCAATGGTATCCTGC...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGCAGGATACCATTGGTaGGATAACAGCAGCTCGATG +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKAGYHW*DNSSSM
Trigger: CATCGAGCTGCTGTTATCCCACCAATGGTATCCTGC...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTCACTGGGGTTCCAATTaGTATGTTACATGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFHWGSN*YVTWGA
Trigger: TGCACCCCATGTAACATACCAATTGGAACCCCAGTG...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGAGCATAGCCGCTCACTaGGGTTCCAATTGGTATGTT +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRSIAAH*GSNWYV
Trigger: AACATACCAATTGGAACCCCAGTGAGCGGCTATGCT...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCTTGGATGTGCCACATaGACTTGTAGAACTTCTACA +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLLGCAT*TCRTST
Trigger: TGTAGAAGTTCTACAAGTCCATGTGGCACATCCAAG...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGCTTGGATGTGCCACATaGACTTGTAGAACTTCTACA +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRLGCAT*TCRTST
Trigger: TGTAGAAGTTCTACAAGTCCATGTGGCACATCCAAG...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTTCCCACTCTCTGTTTaGACTCTTGGATGTGCCACA +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRFPLSV*TLGCAT
Trigger: TGTGGCACATCCAAGAGTCCAAACAGAGAGTGGGAA...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTGACTGCTGTCTTCAATaGGCATTCTCGAAATGGACC +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFDCCLQ*AFSKWT
Trigger: GGTCCATTTCGAGAATGCCCATTGAAGACAGCAGTC...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCGTGAGCCTCTGGACATaGTGTTTTGATAACTCACAG +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIVSLWT*CFDNSQ
Trigger: CTGTGAGTTATCAAAACACCATGTCCAGAGGCTCAC...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp ATAAACATGCAGTGGAAAACTGGCTGTCAGAATACTTTTATGAAGAGTATTAGGGGGATACTTTCCCTCTaGGTAGGGGTCAGTGTCGAT +
Preference number: 4 (lower is better)
Translates to: INMQWKTGCQNTFMKSIRGILSL*VGVSVD
Trigger: ATCGACACTGACCCCTACCCAGAGGGAAAGTATCCC...CCTAATACTCTTCATAAAAGTATTCTGACAGCCAGTTTTCCACTGCATGTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CCA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAAGTGTGTTGGGTGTCCTaGAGACATGGAAGCAGAGTT +
Preference number: 4 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIEVCWVS*RHGSRV
Trigger: AACTCTGCTTCCATGTCTCCAGGACACCCAACACAC...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp CTCCAGGTGATGGTAAATAAAGTAATACGCACATGCATTATGATGAGGATGGAGGTCTCTGTTGCAACATaGTCTCCTGAGTTCTTACTG +
Preference number: 4 (lower is better)
Translates to: LQVMVNKVIRTCIMMRMEVSVAT*SPEFLL
Trigger: CAGTAAGAACTCAGGAGACCATGTTGCAACAGAGAC...CTCCATCCTCATCATAATGCATGTGCGTATTACTTTATTTACCATCACCTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTGCAGAAGGTGAGTTCTaGAATGTAGAAGTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFAEGEF*NVEVGG
Trigger: GCCTCCTACTTCTACATTCCAGAACTCACCTTCTGC...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTAGCAGAAGGTGAGTTCTaGAATGTAGAAGTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLAEGEF*NVEVGG
Trigger: GCCTCCTACTTCTACATTCCAGAACTCACCTTCTGC...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCCAGGCCTACTTCCCCTaGATTTGTCCACAAGATTTT +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIQAYFP*ICPQDF
Trigger: AAAATCTTGTGGACAAATCCAGGGGAAGTAGGCCTG...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp ATAAACATGCAGTGGAAAACTGGCTGTCAGAATACTTTTATGAAGAGTATTAGGGACGTGACTCCTCTCTaGGGATTTTCCAGGCCTACT +
Preference number: 4 (lower is better)
Translates to: INMQWKTGCQNTFMKSIRDVTPL*GFSRPT
Trigger: AGTAGGCCTGGAAAATCCCCAGAGAGGAGTCACGTC...CCTAATACTCTTCATAAAAGTATTCTGACAGCCAGTTTTCCACTGCATGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAATCACAACTGAGGTGTTaGCAGTACCAGGCACTACTC +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKSQLRC*QYQALL
Trigger: GAGTAGTGCCTGGTACTGCCAACACCTCAGTTGTGA...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAATTCGTGTCTCACCACTaGTCACAACTGAGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIEFVSHH*SQLRCW
Trigger: CCAACACCTCAGTTGTGACCAGTGGTGAGACACGAA...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGACATGCAATCGGTGTTaGTGGAGTACTGCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRTCNRC*WSTAEH
Trigger: ATGCTCAGCAGTACTCCACCAACACCGATTGCATGT...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTGTAAGCTTTTCCTTTaGAACCTGAGACACCAGGAG +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLICKLFL*NLRHQE
Trigger: CTCCTGGTGTCTCAGGTTCCAAAGGAAAAGCTTACA...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGAGTGAGAGTAAATGCTaGTCCATAGTGATGGGGAAA +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRSESKC*SIVMGK
Trigger: TTTCCCCATCACTATGGACCAGCATTTACTCTCACT...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTCTTGCTATCTTGGGTaGCAGAGGTGGAAGAAAATC +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLISCYLG*QRWKKI
Trigger: GATTTTCTTCCACCTCTGCCACCCAAGATAGCAAGA...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTATTGGTCTTGCTATCTTaGGTGGCAGAGGTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLLVLLS*VAEVEE
Trigger: TTCTTCCACCTCTGCCACCCAAGATAGCAAGACCAA...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
3UTR CAA 72 bp TGCTTTATCCTCTTCTTTTTCTTCTACTTTTTCTTCTaGCGAGGGTCGAGCAATTTGCTGGTTTCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: CFILFFFFYFFF*RGSSNLLVSAS
Trigger: AGAGGCAGAAACCAGCAAATTGCTCGACCCTCGCAAGAAGAAAAAGTAGAAGAAAAAGAAGAGGATAAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR TCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAGTACACCTTGGTATCTaGTGGCTGGTTATACAGTGG +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQVHLGI*WLVIQW
Trigger: CCACTGTATAACCAGCCATCAGATACCAAGGTGTAC...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR TCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTATCACCTGGTTTGTCTTaGTGTTCTCATGGTACACCT +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLSPGLS*CSHGTP
Trigger: AGGTGTACCATGAGAACATCAAGACAAACCAGGTGA...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAACTCTGCCCAACTCGCTaGAATCTTTCTTGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQLCPTR*NLSCCS
Trigger: AGAACAGCAAGAAAGATTTCAGCGAGTTGGGCAGAG...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR TCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAGCGACACTTTCACATTaGGACACATCTCGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQATLSH*DTSRSS
Trigger: TGAAGAGCGAGATGTGTCTCAATGTGAAAGTGTCGC...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR TCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAATATCTTCATCCTCCTaGGCAGAAACAGTGGAAGCG +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQISSSS*AETVEA
Trigger: CGCTTCCACTGTTTCTGCTCAGGAGGATGAAGATAT...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR TCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAACTCCTCCAGGAGTGCTaGCTCATGCATTGCTTTAAT +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQLLQEC*LMHCFN
Trigger: ATTAAAGCAATGCATGAGTCAGCACTCCTGGAGGAG...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR TCA 90 bp GGAGGACTGATCTCCTTTACTGATTGGTCTAAATTCAAAAGTGAATTGGTTAAATCTTTGAGGTCAGAATaGGGACTCCCCCTGGGTAAT +
Preference number: 4 (lower is better)
Translates to: GGLISFTDWSKFKSELVKSLRSE*GLPLGN
Trigger: ATTACCCAGGGGGAGTCCTCATTCTGACCTCAAAGA...TTTAACCAATTCACTTTTGAATTTAGACCAATCAGTAAAGGAGATCAGTCCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR TCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTATACAGTCCTTTCTTTaGGGTCAGAATGAGGACTCC +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFIQSFL*GQNEDS
Trigger: GGAGTCCTCATTCTGACCTCAAAGAAAGGACTGTAT...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGGATGGCAGATTGACCTaGGTTGTTGTCAAACTTTAT +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRDGRLT*VVVKLY
Trigger: ATAAAGTTTGACAACAACTCAGGTCAATCTGCCATC...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAACTTGTTCCCCCTGGATaGGGCACTAAAATTGTTGGA +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKLVPPG*GTKIVG
Trigger: TCCAACAATTTTAGTGCCTCATCCAGGGGGAACAAG...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTATTGGATCCAAAGGTGTaGTTACACTGGTTCCATTGG +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLLDPKV*LHWFHW
Trigger: CCAATGGAACCAGTGTAATCACACCTTTGGATCCAA...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAAGTGTATAAACACTaGACAGATCTCTTCTCCACC +
Preference number: 4 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVIEVYKH*TDLFST
Trigger: GGTGGAGAAGAGATCTGTTCAGTGTTTATACACTTC...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGCTCAGAATAAACTACTaGAGAATGAGGCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRLRINY*RMRLGL
Trigger: AAGCCCCAGCCTCATTCTTCAGTAGTTTATTCTGAG...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAACTCAGAATAAACTACTaGAGAATGAGGCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQLRINY*RMRLGL
Trigger: AAGCCCCAGCCTCATTCTTCAGTAGTTTATTCTGAG...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAATTCTGGAGAGACCCTTaGACCTGGTCTTTGATGATG +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKFWRDP*TWSLMM
Trigger: CATCATCAAAGACCAGGTTCAAGGGTCTCTCCAGAA...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGAAGCTTGGTGAAGAATaGAGGCAAGTAGCTTATACT +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLKLGEE*RQVAYT
Trigger: AGTATAAGCTACTTGCCTTCATTCTTCACCAAGCTT...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGATTTCCTGCTGTTTaGCTTGCTGATCAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQRFPAV*LADQLW
Trigger: CCAAAGCTGATCAGCAAGTCAAACAGCAGGAAATCT...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATATTATTATAGTCCACTaGATTGCCTGTATCAAAGGC +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNIIIVH*IACIKG
Trigger: GCCTTTGATACAGGCAATTCAGTGGACTATAATAAT...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATACCAAAGTTGATGCGCTaGTTTGAACATAAGTACACC +
Preference number: 4 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVIPKLMR*FEHKYT
Trigger: GGTGTACTTATGTTCAAATCAGCGCATCAACTTTGG...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCCCAAAGTTGATGCGCTaGTTTGAACATAAGTACACC +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIPKLMR*FEHKYT
Trigger: GGTGTACTTATGTTCAAATCAGCGCATCAACTTTGG...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTTTTCCTTTGGAACCTaGGACACCAGGAGCCTTAAA +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRFSFGT*DTRSLK
Trigger: TTTAAGGCTCCTGGTGTCTCAGGTTCCAAAGGAAAA...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAATTTTCCTTTGGAACCTaGGACACCAGGAGCCTTAAA +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQFSFGT*DTRSLK
Trigger: TTTAAGGCTCCTGGTGTCTCAGGTTCCAAAGGAAAA...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAAGGACTGTGTTCACCATaGGTTTTTCAGGATGCAGCA +
Preference number: 4 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIEGLCSP*VFQDAA
Trigger: TGCTGCATCCTGAAAAACTCATGGTGAACACAGTCC...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTTTAAATCATCCACAGTaGCTCAGCTCATGGTCTCGT +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFLNHPQ*LSSWSR
Trigger: ACGAGACCATGAGCTGAGTCACTGTGGATGATTTAA...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR TCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATGGTGTTTCATACCTGTaGGAAGATATCTCTTTTGTT +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNGVSYL*EDISFV
Trigger: AACAAAAGAGATATCTTCTCACAGGTATGAAACACC...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395851.5
CDS-3UTR GCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAACTCAGGAGGTTTAGCTaGCTCTTCTTCAAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQLRRFS*LFFKLL
Trigger: CAACAGCTTGAAGAAGAGGCAGCTAAACCTCCTGAG...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR GCA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATCTCAGGAGGTTTAGCTaGCTCTTCTTCAAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNLRRFS*LFFKLL
Trigger: CAACAGCTTGAAGAAGAGGCAGCTAAACCTCCTGAG...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAGCTGGTTTCTGCCTCTaGGTTTCCCATAATTCCTTC +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQAGFCL*VSHNSF
Trigger: GAAGGAATTATGGGAAACGCAGAGGCAGAAACCAGC...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR GCA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATGCTGGTTTCTGCCTCTaGGTTTCCCATAATTCCTTC +
Preference number: 4 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNAGFCL*VSHNSF
Trigger: GAAGGAATTATGGGAAACGCAGAGGCAGAAACCAGC...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCCAATTTGCTGGTTTCTaGCTCTGCGTTTCCCATAAT +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIQFAGF*LCVSHN
Trigger: ATTATGGGAAACGCAGAGGCAGAAACCAGCAAATTG...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAACACCATTTTAGCAATTaGTGCCCAGTTACGACCATG +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQHHFSN*CPVTTM
Trigger: CATGGTCGTAACTGGGCAGCAATTGCTAAAATGGTG...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAATAGGAAACATTCTCTaGCTCTCTGGCTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQIGNIL*LSGSPS
Trigger: GGATGGAGAGCCAGAGAGGCAGAGAATGTTTCCTAT...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR GCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAGTATGTTACATGGGGTaGAGGATACCATTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQVCYMG*RIPLVG
Trigger: TCCCACCAATGGTATCCTGCACCCCATGTAACATAC...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR GCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGGAGAAGTCAAATAAGTaGCTGGTGTTCCCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKREKSNK*LVFPVR
Trigger: TCTCACAGGGAACACCAGGCACTTATTTGACTTCTC...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAAAACATGGCCTTTGGATaGAGCTTCCTCTCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIENMAFG*SFLSAF
Trigger: AAAGGCAGAGAGGAAGCTGCATCCAAAGGCCATGTT...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTAAAAGCTTTCAGTTGTTaGTCTTGGTGTCCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLKAFSC*SWCPLH
Trigger: ATGCAGGGGACACCAAGAGCAACAACTGAAAGCTTT...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTAAATGGCACCTTCAAATaGTCGTATGGGAGGACTTTC +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLNGTFK*SYGRTF
Trigger: GAAAGTCCTCCCATACGAGCATTTGAAGGTGCCATT...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGGGACGCAAGTTCACTTaGATCTGTTGTGAGGTAATG +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRGRKFT*ICCEVM
Trigger: CATTACCTCACAACAGATGCAAGTGAACTTGCGTCC...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATTTCTGCTCTAGCTGCTaGTGTTCACTAACTGCTGCT +
Preference number: 4 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNFCSSC*CSLTAA
Trigger: AGCAGCAGTTAGTGAACAGCAGCAGCTAGAGCAGAA...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCATTTTCCGCTTGATTTaGCTTAACAACCTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIIFRLI*LNNLWL
Trigger: CAGCCAGAGGTTGTTAAGGCAAATCAAGCGGAAAAT...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTAGTTCCCCTCACTTTGTaGAGTTCAGTCATCACTATC +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLVPLTL*SSVITI
Trigger: GATAGTGATGACTGAACTGCACAAAGTGAGGGGAAC...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTGTTCCCCTCACTTTGTaGAGTTCAGTCATCACTATC +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFVPLTL*SSVITI
Trigger: GATAGTGATGACTGAACTGCACAAAGTGAGGGGAAC...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCCAAGGGGATATACACTaGAAAAAGGTCATCTATTTA +
Preference number: 4 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAQGDIH*KKVIYL
Trigger: TAAATAGATGACCTTTTTGCAGTGTATATCCCCTTG...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAACAAAGTGAGAGTAAATaGTGGTCCATAGTGATGGGG +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQQSESK*WSIVMG
Trigger: CCCCATCACTATGGACCAGCATTTACTCTCACTTTG...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATAAAGTAATACGCACATaGATTATGATGAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNKVIRT*IMMRME
Trigger: CTCCATCCTCATCATAATGCATGTGCGTATTACTTT...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR GCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGACAGTAAGTTGTCAGTaGTGCTCTGTGCTTACCACT +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRTVSCQ*CSVLTT
Trigger: AGTGGTAAGCACAGAGCAGCACTGACAACTTACTGT...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CCA 90 bp CTCCAGGTGATGGTAAATAAAGTAATACGCACATGCATTATGATGAGGATGGAGTTGGTATCTGATGGCTaGTTATACAGTGGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: LQVMVNKVIRTCIMMRMELVSDG*LYSGSS
Trigger: TGAACTGCCACTGTATAACCAGCCATCAGATACCAA...CTCCATCCTCATCATAATGCATGTGCGTATTACTTTATTTACCATCACCTGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTCTCATGGTACACCTTaGTATCTGATGGCTGGTTAT +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLISHGTP*YLMAGY
Trigger: ATAACCAGCCATCAGATACCAAGGTGTACCATGAGA...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTAATCAAACATCATAGGTaGAATCACAGAGAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLIKHHR*NHRELP
Trigger: CGGCAGCTCTCTGTGATTCCACCTATGATGTTTGAT...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp ATCTCCTTTTCATGGTCAGTCCAAACATTCATAAACTGCCTATCTTTATACACTGGTCGAGCAATTTGCTaGTTTCTGCCTCTGCGTTTC +
Preference number: 4 (lower is better)
Translates to: ISFSWSVQTFINCLSLYTGRAIC*FLPLRF
Trigger: GAAACGCAGAGGCAGAAACCAGCAAATTGCTCGACC...AGTGTATAAAGATAGGCAGTTTATGAATGTTTGGACTGACCATGAAAAGGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR CCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGCCTGAGCAGAAACAGTaGAAGCGACACTTTCACATT +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRPEQKQ*KRHFHI
Trigger: AATGTGAAAGTGTCGCTTCCACTGTTTCTGCTCAGG...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAAGATGCATGGTTTTCTaGCACCCTCACTTCAACGTC +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQRCMVF*HPHFNV
Trigger: GACGTTGAAGTGAGGGTGCCAGAAAACCATGCATCT...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGGTTCCACCTTCTCACTaGCTCTATCCAAGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRVPPSH*LYPSLF
Trigger: AAAGAGACTTGGATAGAGCCAGTGAGAAGGTGGAAC...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp ATAAACATGCAGTGGAAAACTGGCTGTCAGAATACTTTTATGAAGAGTATTAGGGCAGGATACCATTGGTaGGATAACAGCAGCTCGATG +
Preference number: 4 (lower is better)
Translates to: INMQWKTGCQNTFMKSIRAGYHW*DNSSSM
Trigger: CATCGAGCTGCTGTTATCCCACCAATGGTATCCTGC...CCTAATACTCTTCATAAAAGTATTCTGACAGCCAGTTTTCCACTGCATGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CCA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAACACTGGGGTTCCAATTaGTATGTTACATGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIEHWGSN*YVTWGA
Trigger: TGCACCCCATGTAACATACCAATTGGAACCCCAGTG...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAACACTGGGGTTCCAATTaGTATGTTACATGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQHWGSN*YVTWGA
Trigger: TGCACCCCATGTAACATACCAATTGGAACCCCAGTG...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAAGCATAGCCGCTCACTaGGGTTCCAATTGGTATGTT +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQSIAAH*GSNWYV
Trigger: AACATACCAATTGGAACCCCAGTGAGCGGCTATGCT...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAAGCATAGCCGCTCACTaGGGTTCCAATTGGTATGTT +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKSIAAH*GSNWYV
Trigger: AACATACCAATTGGAACCCCAGTGAGCGGCTATGCT...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAATTCCCACTCTCTGTTTaGACTCTTGGATGTGCCACA +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQFPLSV*TLGCAT
Trigger: TGTGGCACATCCAAGAGTCCAAACAGAGAGTGGGAA...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CCA 90 bp GGAGGACTGATCTCCTTTACTGATTGGTCTAAATTCAAAAGTGAATTGGTTAAAATCCCACTGACGGCTTaGGTGTTTCTTGAGTGTAGG +
Preference number: 4 (lower is better)
Translates to: GGLISFTDWSKFKSELVKIPLTA*VFLECR
Trigger: CCTACACTCAAGAAACACCCAAGCCGTCAGTGGGAT...TTTAACCAATTCACTTTTGAATTTAGACCAATCAGTAAAGGAGATCAGTCCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAAGATTCCTGTTGCCGTaGCAGTCCAAGAGAGATAGA +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKRFLLP*QSKRDR
Trigger: TCTATCTCTCTTGGACTGCCACGGCAACAGGAATCT...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAACCACTGAAATTTTGCTaGTTGGAGTTCCCCGAGTTA +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQPLKFC*LEFPEL
Trigger: TAACTCGGGGAACTCCAACCAGCAAAATTTCAGTGG...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGACTGCTGTCTTCAATaGGCATTCTCGAAATGGACC +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKDCCLQ*AFSKWT
Trigger: GGTCCATTTCGAGAATGCCCATTGAAGACAGCAGTC...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAATTCATGAGCTGTTCTTaGACTCCTAGTCCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKFMSCS*TPSPFS
Trigger: CGAGAAGGGACTAGGAGTCCAAGAACAGCTCATGAA...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp ATAAACATGCAGTGGAAAACTGGCTGTCAGAATACTTTTATGAAGAGTATTAGGAATGAGGACTCCCCCTaGGTAATGCTCGGCATATCA +
Preference number: 4 (lower is better)
Translates to: INMQWKTGCQNTFMKSIRNEDSP*VMLGIS
Trigger: TGATATGCCGAGCATTACCCAGGGGGAGTCCTCATT...CCTAATACTCTTCATAAAAGTATTCTGACAGCCAGTTTTCCACTGCATGTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTTTCAGTTGTTGCTCTTaGTGTCCCCTGCATTATGGA +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFFSCCS*CPLHYG
Trigger: TCCATAATGCAGGGGACACCAAGAGCAACAACTGAA...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGTTGTCAAACTTTATTaGTGTGCCCTGGGAAATGGA +
Preference number: 4 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVIVVKLY*CALGNG
Trigger: TCCATTTCCCAGGGCACACCAATAAAGTTTGACAAC...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTACACTTTTATGTTCTCTaGCACAATTTCCAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLHFYVL*HNFQRR
Trigger: CCTCCGCTGGAAATTGTGCCAGAGAACATAAAAGTG...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTCACTTTTATGTTCTCTaGCACAATTTCCAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFHFYVL*HNFQRR
Trigger: CCTCCGCTGGAAATTGTGCCAGAGAACATAAAAGTG...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTTCATGGGTGAGCCTCTaGACATGGTGTTTTGATAAC +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFSWVSL*TWCFDN
Trigger: GTTATCAAAACACCATGTCCAGAGGCTCACCCATGA...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTAGTCTCTGTTGCAACATaGTCTCCTGAGTTCTTACTG +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLVSVAT*SPEFLL
Trigger: CAGTAAGAACTCAGGAGACCATGTTGCAACAGAGAC...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAGTTCCATTGGTTCCTTaGAAAACACTGGGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQVPLVP*KTLGLC
Trigger: ACAGAGACCCAGTGTTTTCCAAGGAACCAATGGAAC...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAATGCCTTAACAACCTCTaGCTGATAGGTCTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQCLNNL*LIGLQF
Trigger: AAACTGCAGACCTATCAGCCAGAGGTTGTTAAGGCA...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTCAGGCCTACTTCCCCTaGATTTGTCCACAAGATTTT +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFQAYFP*ICPQDF
Trigger: AAAATCTTGTGGACAAATCCAGGGGAAGTAGGCCTG...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATACATGCAATCGGTGTTaGTGGAGTACTGCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNTCNRC*WSTAEH
Trigger: ATGCTCAGCAGTACTCCACCAACACCGATTGCATGT...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTATCTTGCTATCTTGGGTaGCAGAGGTGGAAGAAAATC +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLSCYLG*QRWKKI
Trigger: GATTTTCTTCCACCTCTGCCACCCAAGATAGCAAGA...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp ATCTCCTTTTCATGGTCAGTCCAAACATTCATAAACTGCCTATCTTTATACACTTTGCTGCAAAAGCTGTaGTGCCTGACTCACTTCAAG +
Preference number: 4 (lower is better)
Translates to: ISFSWSVQTFINCLSLYTLLQKL*CLTHFK
Trigger: CTTGAAGTGAGTCAGGCATCACAGCTTTTGCAGCAA...AGTGTATAAAGATAGGCAGTTTATGAATGTTTGGACTGACCATGAAAAGGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR TCA 90 bp ATAAACATGCAGTGGAAAACTGGCTGTCAGAATACTTTTATGAAGAGTATTAGGGTACACCTTGGTATCTaGTGGCTGGTTATACAGTGG +
Preference number: 4 (lower is better)
Translates to: INMQWKTGCQNTFMKSIRVHLGI*WLVIQW
Trigger: CCACTGTATAACCAGCCATCAGATACCAAGGTGTAC...CCTAATACTCTTCATAAAAGTATTCTGACAGCCAGTTTTCCACTGCATGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR TCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAATCACCTGGTTTGTCTTaGTGTTCTCATGGTACACCT +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQSPGLS*CSHGTP
Trigger: AGGTGTACCATGAGAACATCAAGACAAACCAGGTGA...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR TCA 90 bp ATAAACATGCAGTGGAAAACTGGCTGTCAGAATACTTTTATGAAGAGTATTAGGCTCTGCCCAACTCGCTaGAATCTTTCTTGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: INMQWKTGCQNTFMKSIRLCPTR*NLSCCS
Trigger: AGAACAGCAAGAAAGATTTCAGCGAGTTGGGCAGAG...CCTAATACTCTTCATAAAAGTATTCTGACAGCCAGTTTTCCACTGCATGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR TCA 90 bp ATCTCCTTTTCATGGTCAGTCCAAACATTCATAAACTGCCTATCTTTATACACTCTCTGCCCAACTCGCTaGAATCTTTCTTGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: ISFSWSVQTFINCLSLYTLCPTR*NLSCCS
Trigger: AGAACAGCAAGAAAGATTTCAGCGAGTTGGGCAGAG...AGTGTATAAAGATAGGCAGTTTATGAATGTTTGGACTGACCATGAAAAGGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR TCA 90 bp CTCCAGGTGATGGTAAATAAAGTAATACGCACATGCATTATGATGAGGATGGAGTCCCATAATTCCTTCTaGCGAGGGCTTTATAATTCT +
Preference number: 4 (lower is better)
Translates to: LQVMVNKVIRTCIMMRMESHNSF*RGLYNS
Trigger: AGAATTATAAAGCCCTCGTCAGAAGGAATTATGGGA...CTCCATCCTCATCATAATGCATGTGCGTATTACTTTATTTACCATCACCTGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR TCA 90 bp GGAGGACTGATCTCCTTTACTGATTGGTCTAAATTCAAAAGTGAATTGGTTAAAGCGACACTTTCACATTaGGACACATCTCGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: GGLISFTDWSKFKSELVKATLSH*DTSRSS
Trigger: TGAAGAGCGAGATGTGTCTCAATGTGAAAGTGTCGC...TTTAACCAATTCACTTTTGAATTTAGACCAATCAGTAAAGGAGATCAGTCCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR TCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAATGGGCATTTATTTGCTaGGCTACCACCAAATCTTCA +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQWAFIC*ATTKSS
Trigger: TGAAGATTTGGTGGTAGCTCAGCAAATAAATGCCCA...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGTTTAAACTGATTTCATaGGCTGTTCTTGGACTCCTA +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLFKLIS*AVLGLL
Trigger: TAGGAGTCCAAGAACAGCTCATGAAATCAGTTTAAA...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGAGCTTCTCTTTAAACTaGTTTCATGAGCTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRSFSLN*FHELFL
Trigger: CAAGAACAGCTCATGAAATCAGTTTAAAGAGAAGCT...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGAGACTCCCTCATTaGCATCCCTTGCTTTATATT +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQRRLPH*HPLLYI
Trigger: AATATAAAGCAAGGGATGTCAATGAGGGAGTCTCCT...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTTCACTAACTGCTGCTaGCCTGCTTCTCAAATTTTC +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRFTNCC*PASQIF
Trigger: GAAAATTTGAGAAGCAGGTCAGCAGCAGTTAGTGAA...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAATTCACTAACTGCTGCTaGCCTGCTTCTCAAATTTTC +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQFTNCC*PASQIF
Trigger: GAAAATTTGAGAAGCAGGTCAGCAGCAGTTAGTGAA...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp GGAGGACTGATCTCCTTTACTGATTGGTCTAAATTCAAAAGTGAATTGGTTAAAGCTACTAGAAGAGTCTaGACTTTGAGAGCCACGTTC +
Preference number: 4 (lower is better)
Translates to: GGLISFTDWSKFKSELVKATRRV*TLRATF
Trigger: GAACGTGGCTCTCAAAGTTCAGACTCTTCTAGTAGC...TTTAACCAATTCACTTTTGAATTTAGACCAATCAGTAAAGGAGATCAGTCCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR TCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCGTCTGCGAGGAAACTTaGTTTCTAGCAAAATCTTGT +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIVCEET*FLAKSC
Trigger: ACAAGATTTTGCTAGAAATCAAGTTTCCTCGCAGAC...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGTCTGCGAGGAAACTTaGTTTCTAGCAAAATCTTGT +
Preference number: 4 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVIVCEET*FLAKSC
Trigger: ACAAGATTTTGCTAGAAATCAAGTTTCCTCGCAGAC...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATATATTTTCAAGCTTGGTaGAGAATGAAGGCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVIYFQAW*RMKASS
Trigger: GCTACTTGCCTTCATTCTTCACCAAGCTTGAAAATA...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTATGCTGTTTGACTTGCTaGTCAGCTTTGGTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLCCLTC*SALVCK
Trigger: TTTGCAAACCAAAGCTGATCAGCAAGTCAAACAGCA...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAAGATTTCCTGCTGTTTaGCTTGCTGATCAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKRFPAV*LADQLW
Trigger: CCAAAGCTGATCAGCAAGTCAAACAGCAGGAAATCT...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTCCAAAGTTGATGCGCTaGTTTGAACATAAGTACACC +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFPKLMR*FEHKYT
Trigger: GGTGTACTTATGTTCAAATCAGCGCATCAACTTTGG...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGAATCACCCCCAAAGTTaGTGCGCTGATTTGAACATA +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRNHPQS*CADLNI
Trigger: TATGTTCAAATCAGCGCATCAACTTTGGGGGTGATT...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAAGTGAAAGCTTTGACTaGAGACAAATGTGGGCTTAT +
Preference number: 4 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVISESFD*RQMWAY
Trigger: ATAAGCCCACATTTGTCTTCAGTCAAAGCTTTCACT...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCCAGAAACTATACGGTTaGCCTTCAAATAATGCAGGA +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIQKLYG*PSNNAG
Trigger: TCCTGCATTATTTGAAGGTCAACCGTATAGTTTCTG...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR GCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGGGAATCACAGAGAGCTaGCGCATTTGTTTCTCATTA +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRGITES*RICFSL
Trigger: TAATGAGAAACAAATGCGGCAGCTCTCTGTGATTCC...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTGACTCGTCTTTGTTCTaGATCAAACATCATAGGTGG +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFDSSLF*IKHHRW
Trigger: CCACCTATGATGTTTGATGCAGAACAAAGACGAGTC...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCTACTTTTTCTTCTTaGGAGGGTCGAGCAATTTGC +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRSTFSS*EGRAIC
Trigger: GCAAATTGCTCGACCCTCGCAAGAAGAAAAAGTAGA...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATATTCCTCAGTTTCTTCTaGTGTACCATCTATCTTGTC +
Preference number: 4 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVIFLSFF*CTIYLV
Trigger: GACAAGATAGATGGTACAGCAGAAGAAACTGAGGAA...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTCATTTTAGCAATTGCTaGCCAGTTACGACCATGTTC +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFHFSNC*PVTTMF
Trigger: GAACATGGTCGTAACTGGGCAGCAATTGCTAAAATG...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAACACCATTTTAGCAATTaGTGCCCAGTTACGACCATG +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQHHFSN*CPVTTM
Trigger: CATGGTCGTAACTGGGCAGCAATTGCTAAAATGGTG...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR GCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGGAAGTTTTCTGTTTATaGTGCTGTAAGAGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLEVFCL*CCKRLS
Trigger: TGACAACCTCTTACAGCAGCATAAACAGAAAACTTC...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATAGGAGTGCTGACTCATaGATTGCTTTAATGTGTCGC +
Preference number: 4 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNRSADS*IALMCR
Trigger: GCGACACATTAAAGCAATGCATGAGTCAGCACTCCT...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAAGGAGTGCTGACTCATaGATTGCTTTAATGTGTCGC +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQRSADS*IALMCR
Trigger: GCGACACATTAAAGCAATGCATGAGTCAGCACTCCT...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR GCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAAGGAGTGCTGACTCATaGATTGCTTTAATGTGTCGC +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKRSADS*IALMCR
Trigger: GCGACACATTAAAGCAATGCATGAGTCAGCACTCCT...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATGAGAAGTCAAATAAGTaGCTGGTGTTCCCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNEKSNK*LVFPVR
Trigger: TCTCACAGGGAACACCAGGCACTTATTTGACTTCTC...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAAAAAGCTTTCAGTTGTTaGTCTTGGTGTCCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIEKAFSC*SWCPLH
Trigger: ATGCAGGGGACACCAAGAGCAACAACTGAAAGCTTT...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAAATGGCACCTTCAAATaGTCGTATGGGAGGACTTTC +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKNGTFK*SYGRTF
Trigger: GAAAGTCCTCCCATACGAGCATTTGAAGGTGCCATT...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAAGGACGCAAGTTCACTTaGATCTGTTGTGAGGTAATG +
Preference number: 4 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIEGRKFT*ICCEVM
Trigger: CATTACCTCACAACAGATGCAAGTGAACTTGCGTCC...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAGTCTATGAAGTTAGCTaGAGTAATGGTAGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQVYEVS*SNGSLP
Trigger: GGGAAGACTACCATTACTGCAGCTAACTTCATAGAC...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATAGTCCACTGAATTaGCTGTATCAAAGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRYSPLN*LYQRQF
Trigger: AAACTGCCTTTGATACAGGCAATTCAGTGGACTATA...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGTATAGTCCACTGAATTaGCTGTATCAAAGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: CADLNISTPDTTARGYTLYSPLN*LYQRQF
Trigger: AAACTGCCTTTGATACAGGCAATTCAGTGGACTATA...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGGTTAAATTACCAGTGTaGGTAACAGTGAGGTATGCC +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRVKLPV*VTVRYA
Trigger: GGCATACCTCACTGTTACGCACACTGGTAATTTAAC...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAATCAGAACTATTTTCTaGACCTTCGCTGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQIRTIF*TFAVFW
Trigger: CCAGAAGACAGCGAAGGTGCAGAAAATAGTTCTGAT...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp ATCTCCTTTTCATGGTCAGTCCAAACATTCATAAACTGCCTATCTTTATACACTTTTGCCTCCGAATGCTaGATCCTTCTTAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: ISFSWSVQTFINCLSLYTFASEC*ILLSIC
Trigger: GCAGATGCTAAGAAGGATCCAGCATTCGGAGGCAAA...AGTGTATAAAGATAGGCAGTTTATGAATGTTTGGACTGACCATGAAAAGGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR CCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAATTGGTATCTGATGGCTaGTTATACAGTGGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQLVSDG*LYSGSS
Trigger: TGAACTGCCACTGTATAACCAGCCATCAGATACCAA...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTATTGGTATCTGATGGCTaGTTATACAGTGGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLLVSDG*LYSGSS
Trigger: TGAACTGCCACTGTATAACCAGCCATCAGATACCAA...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAATCTCATGGTACACCTTaGTATCTGATGGCTGGTTAT +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQSHGTP*YLMAGY
Trigger: ATAACCAGCCATCAGATACCAAGGTGTACCATGAGA...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGTCTTGATGTTCTCATaGTACACCTTGGTATCTGAT +
Preference number: 4 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVIVLMFS*YTLVSD
Trigger: ATCAGATACCAAGGTGTACCATGAGAACATCAAGAC...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAATCAAACATCATAGGTaGAATCACAGAGAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKIKHHR*NHRELP
Trigger: CGGCAGCTCTCTGTGATTCCACCTATGATGTTTGAT...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAATCAAACATCATAGGTaGAATCACAGAGAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQIKHHR*NHRELP
Trigger: CGGCAGCTCTCTGTGATTCCACCTATGATGTTTGAT...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAACCTGAGCAGAAACAGTaGAAGCGACACTTTCACATT +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQPEQKQ*KRHFHI
Trigger: AATGTGAAAGTGTCGCTTCCACTGTTTCTGCTCAGG...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAATGCTGTCATTCACCTaGGTCTCCACACTTTCATCT +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQMLSFT*VSTLSS
Trigger: AGATGAAAGTGTGGAGACCCAGGTGAATGACAGCAT...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAATCAACTTTAGATGCATaGTTTTCTGGCACCCTCACT +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQSTLDA*FSGTLT
Trigger: AGTGAGGGTGCCAGAAAACCATGCATCTAAAGTTGA...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTATCAACTTTAGATGCATaGTTTTCTGGCACCCTCACT +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLSTLDA*FSGTLT
Trigger: AGTGAGGGTGCCAGAAAACCATGCATCTAAAGTTGA...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATCCAAGTCTCTTTCTTTaGTATTATCACCTTCAACTT +
Preference number: 4 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNPSLFL*YYHLQL
Trigger: AAGTTGAAGGTGATAATACCAAAGAAAGAGACTTGG...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAGTTCCACCTTCTCACTaGCTCTATCCAAGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQVPPSH*LYPSLF
Trigger: AAAGAGACTTGGATAGAGCCAGTGAGAAGGTGGAAC...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGAATTGGTATGTTACATaGGGTGCAGGATACCATTGG +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRNWYVT*GAGYHW
Trigger: CCAATGGTATCCTGCACCCCATGTAACATACCAATT...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATAGTTATCACTTGATGTaGAGCAGGCTGAAGGACTTC +
Preference number: 4 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNSYHLM*SRLKDF
Trigger: GAAGTCCTTCAGCCTGCTCCACATCAAGTGATAACT...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAACCACTGAAATTTTGCTaGTTGGAGTTCCCCGAGTTA +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKPLKFC*LEFPEL
Trigger: TAACTCGGGGAACTCCAACCAGCAAAATTTCAGTGG...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTATTTATTGGTGTGCCCTaGGAAATGGAACCCTCAATT +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLFIGVP*EMEPSI
Trigger: AATTGAGGGTTCCATTTCCCAGGGCACACCAATAAA...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTTTTATTGGTGTGCCCTaGGAAATGGAACCCTCAATT +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFFIGVP*EMEPSI
Trigger: AATTGAGGGTTCCATTTCCCAGGGCACACCAATAAA...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTGTTGTCAAACTTTATTaGTGTGCCCTGGGAAATGGA +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFVVKLY*CALGNG
Trigger: TCCATTTCCCAGGGCACACCAATAAAGTTTGACAAC...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATTGCCTTAACAACCTCTaGCTGATAGGTCTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNCLNNL*LIGLQF
Trigger: AAACTGCAGACCTATCAGCCAGAGGTTGTTAAGGCA...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAACAGGCCTACTTCCCCTaGATTTGTCCACAAGATTTT +
Preference number: 4 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIEQAYFP*ICPQDF
Trigger: AAAATCTTGTGGACAAATCCAGGGGAAGTAGGCCTG...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGATCAGCAAAAGAATaGCCTCTAGAGCTAACTGAG +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKGSAKE*PLELTE
Trigger: CTCAGTTAGCTCTAGAGGCCATTCTTTTGCTGATCC...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTGAATACTTAGGGGCATaGTTAAATTACCAGTGTGCG +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFEYLGA*LNYQCA
Trigger: CGCACACTGGTAATTTAACCATGCCCCTAAGTATTC...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCAAATCCATGTATAAGTaGACCCACACAGTTCAAACC +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIKSMYK*THTVQT
Trigger: GGTTTGAACTGTGTGGGTCCACTTATACATGGATTT...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTTCATTAAGTGGAAGTaGATCATCATGAAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRFIKWK*IIMKVF
Trigger: GAAGACCTTCATGATGATCCACTTCCACTTAATGAA...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGCTGTCCAATGGTCACTaGAGTTTTCTGGGCATAAAT +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRLSNGH*SFLGIN
Trigger: ATTTATGCCCAGAAAACTCCAGTGACCATTGGACAG...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268712.8
3UTR CAA 72 bp ATAGGGTCCTCCATAAGCCCATTCATGTTAATGAACTaGACTCGTCTTTGTTCTGCATCAAACATCATAGGT +
Preference number: 4 (lower is better)
Translates to: IGSSISPFMLMN*TRLCSASNIIG
Trigger: ACCTATGATGTTTGATGCAGAACAAAGACGAGTCAAGTTCATTAACATGAATGGGCTTATGGAGGACCCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR TCA 90 bp ATCTCCTTTTCATGGTCAGTCCAAACATTCATAAACTGCCTATCTTTATACACTTCACCTGGTTTGTCTTaGTGTTCTCATGGTACACCT +
Preference number: 4 (lower is better)
Translates to: ISFSWSVQTFINCLSLYTSPGLS*CSHGTP
Trigger: AGGTGTACCATGAGAACATCAAGACAAACCAGGTGA...AGTGTATAAAGATAGGCAGTTTATGAATGTTTGGACTGACCATGAAAAGGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR TCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAATGGGCATTTATTTGCTaGGCTACCACCAAATCTTCA +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKWAFIC*ATTKSS
Trigger: TGAAGATTTGGTGGTAGCTCAGCAAATAAATGCCCA...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAATGGGCATTTATTTGCTaGGCTACCACCAAATCTTCA +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQWAFIC*ATTKSS
Trigger: TGAAGATTTGGTGGTAGCTCAGCAAATAAATGCCCA...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR TCA 90 bp GGAGGACTGATCTCCTTTACTGATTGGTCTAAATTCAAAAGTGAATTGGTTAAATGGAATGCTCTCCACTaGAATTTTGCTGGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: GGLISFTDWSKFKSELVKWNALH*NFAGWS
Trigger: ACTCCAACCAGCAAAATTTCAGTGGAGAGCATTCCA...TTTAACCAATTCACTTTTGAATTTAGACCAATCAGTAAAGGAGATCAGTCCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR TCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTGATGGCAGATTGACCTaGGTTGTTGTCAAACTTTAT +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFDGRLT*VVVKLY
Trigger: ATAAAGTTTGACAACAACTCAGGTCAATCTGCCATC...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTGGTGTTTCATACCTGTaGGAAGATAAGCTACTAGAA +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFGVSYL*EDKLLE
Trigger: TTCTAGTAGCTTATCTTCTCACAGGTATGAAACACC...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTATATTTTCAAGCTTGGTaGAGAATGAAGGCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLYFQAW*RMKASS
Trigger: GCTACTTGCCTTCATTCTTCACCAAGCTTGAAAATA...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAAGACATGACAACTCCATaGTCCTCAACTTTGTCATCA +
Preference number: 4 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIEDMTTP*SSTLSS
Trigger: TGATGACAAAGTTGAGGATCATGGAGTTGTCATGTC...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCATTATTATAGTCCACTaGATTGCCTGTATCAAAGGC +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIIIIVH*IACIKG
Trigger: GCCTTTGATACAGGCAATTCAGTGGACTATAATAAT...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAAATCACCCCCAAAGTTaGTGCGCTGATTTGAACATA +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKNHPQS*CADLNI
Trigger: TATGTTCAAATCAGCGCATCAACTTTGGGGGTGATT...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
39% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTAAGTGAAAGCTTTGACTaGAGACAAATGTGGGCTTAT +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLSESFD*RQMWAY
Trigger: ATAAGCCCACATTTGTCTTCAGTCAAAGCTTTCACT...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAAAAGCAAAAGGAGGACTaGTCTCCTTTACTGATTGGT +
Preference number: 4 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIEKQKED*SPLLIG
Trigger: ACCAATCAGTAAAGGAGATCAGTCCTCCTTTTGCTT...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR TCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAAATCAGTTGGGAGGCTaGCAACTTACAAAGCACAAT +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQNQLGG*QLTKHN
Trigger: ATTGTGCTTTGTAAGTTGTCAGCCTCCCAACTGATT...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR GCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTTCTCATTATTCTCCTaGTCAGAGAGCCCATCAATA +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRFSLFS*SESPSI
Trigger: TATTGATGGGCTCTCTGAGCAGGAGAATAATGAGAA...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTTTCTCATTATTCTCCTaGTCAGAGAGCCCATCAATA +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFFSLFS*SESPSI
Trigger: TATTGATGGGCTCTCTGAGCAGGAGAATAATGAGAA...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTATTCTCATTATTCTCCTaGTCAGAGAGCCCATCAATA +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLFSLFS*SESPSI
Trigger: TATTGATGGGCTCTCTGAGCAGGAGAATAATGAGAA...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAGGAATCACAGAGAGCTaGCGCATTTGTTTCTCATTA +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQGITES*RICFSL
Trigger: TAATGAGAAACAAATGCGGCAGCTCTCTGTGATTCC...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR GCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAGACTCGTCTTTGTTCTaGATCAAACATCATAGGTGG +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQDSSLF*IKHHRW
Trigger: CCACCTATGATGTTTGATGCAGAACAAAGACGAGTC...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR GCA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAAGACTCGTCTTTGTTCTaGATCAAACATCATAGGTGG +
Preference number: 4 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIEDSSLF*IKHHRW
Trigger: CCACCTATGATGTTTGATGCAGAACAAAGACGAGTC...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp ATAAGCCCATTCATGTTAATGAACTTGACTCGTCTTTGTTCTGCATCAAACATCGACTCGTCTTTGTTCTaGATCAAACATCATAGGTGG +
Preference number: 4 (lower is better)
Translates to: ISPFMLMNLTRLCSASNIDSSLF*IKHHRW
Trigger: CCACCTATGATGTTTGATGCAGAACAAAGACGAGTC...GATGTTTGATGCAGAACAAAGACGAGTCAAGTTCATTAACATGAATGGGCTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR GCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAACAATTTGCTGGTTTCTaGCTCTGCGTTTCCCATAAT +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQQFAGF*LCVSHN
Trigger: ATTATGGGAAACGCAGAGGCAGAAACCAGCAAATTG...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR GCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAACAATTTGCTGGTTTCTaGCTCTGCGTTTCCCATAAT +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKQFAGF*LCVSHN
Trigger: ATTATGGGAAACGCAGAGGCAGAAACCAGCAAATTG...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp ATAAGCCCATTCATGTTAATGAACTTGACTCGTCTTTGTTCTGCATCAAACATCCAATTTGCTGGTTTCTaGCTCTGCGTTTCCCATAAT +
Preference number: 4 (lower is better)
Translates to: ISPFMLMNLTRLCSASNIQFAGF*LCVSHN
Trigger: ATTATGGGAAACGCAGAGGCAGAAACCAGCAAATTG...GATGTTTGATGCAGAACAAAGACGAGTCAAGTTCATTAACATGAATGGGCTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR GCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAATCTACTTTTTCTTCTTaGGAGGGTCGAGCAATTTGC +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQSTFSS*EGRAIC
Trigger: GCAAATTGCTCGACCCTCGCAAGAAGAAAAAGTAGA...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR GCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAACATTTTAGCAATTGCTaGCCAGTTACGACCATGTTC +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQHFSNC*PVTTMF
Trigger: GAACATGGTCGTAACTGGGCAGCAATTGCTAAAATG...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR GCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAACCTTCAACTTTAGATaGATGGTTTTCTGGCACCCT +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQTFNFR*MVFWHP
Trigger: AGGGTGCCAGAAAACCATGCATCTAAAGTTGAAGGT...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR GCA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAAACCTTCAACTTTAGATaGATGGTTTTCTGGCACCCT +
Preference number: 4 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIETFNFR*MVFWHP
Trigger: AGGGTGCCAGAAAACCATGCATCTAAAGTTGAAGGT...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR GCA 90 bp ATAAACATGCAGTGGAAAACTGGCTGTCAGAATACTTTTATGAAGAGTATTAGGGGACGCAAGTTCACTTaGATCTGTTGTGAGGTAATG +
Preference number: 4 (lower is better)
Translates to: INMQWKTGCQNTFMKSIRGRKFT*ICCEVM
Trigger: CATTACCTCACAACAGATGCAAGTGAACTTGCGTCC...CCTAATACTCTTCATAAAAGTATTCTGACAGCCAGTTTTCCACTGCATGTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR GCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAATCAGAACTATTTTCTaGACCTTCGCTGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQIRTIF*TFAVFW
Trigger: CCAGAAGACAGCGAAGGTGCAGAAAATAGTTCTGAT...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAATGGCAGTTCAACTTTTaGGCCAAGACCTTCAAAAAT +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQWQFNF*AKTFKN
Trigger: ATTTTTGAAGGTCTTGGCCCAAAAGTTGAACTGCCA...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAATTGGTATCTGATGGCTaGTTATACAGTGGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQLVSDG*LYSGSS
Trigger: TGAACTGCCACTGTATAACCAGCCATCAGATACCAA...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAATCTCATGGTACACCTTaGTATCTGATGGCTGGTTAT +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQSHGTP*YLMAGY
Trigger: ATAACCAGCCATCAGATACCAAGGTGTACCATGAGA...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CCA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTAGTCTTGATGTTCTCATaGTACACCTTGGTATCTGAT +
Preference number: 4 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLVLMFS*YTLVSD
Trigger: ATCAGATACCAAGGTGTACCATGAGAACATCAAGAC...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTGTCTTGATGTTCTCATaGTACACCTTGGTATCTGAT +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFVLMFS*YTLVSD
Trigger: ATCAGATACCAAGGTGTACCATGAGAACATCAAGAC...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp ATCTCCTTTTCATGGTCAGTCCAAACATTCATAAACTGCCTATCTTTATACACTATCAAACATCATAGGTaGAATCACAGAGAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: ISFSWSVQTFINCLSLYTIKHHR*NHRELP
Trigger: CGGCAGCTCTCTGTGATTCCACCTATGATGTTTGAT...AGTGTATAAAGATAGGCAGTTTATGAATGTTTGGACTGACCATGAAAAGGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR CCA 90 bp ATAAACATGCAGTGGAAAACTGGCTGTCAGAATACTTTTATGAAGAGTATTAGGCCTGAGCAGAAACAGTaGAAGCGACACTTTCACATT +
Preference number: 4 (lower is better)
Translates to: INMQWKTGCQNTFMKSIRPEQKQ*KRHFHI
Trigger: AATGTGAAAGTGTCGCTTCCACTGTTTCTGCTCAGG...CCTAATACTCTTCATAAAAGTATTCTGACAGCCAGTTTTCCACTGCATGTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CCA 90 bp ATAAACATGCAGTGGAAAACTGGCTGTCAGAATACTTTTATGAAGAGTATTAGGATGCTGTCATTCACCTaGGTCTCCACACTTTCATCT +
Preference number: 4 (lower is better)
Translates to: INMQWKTGCQNTFMKSIRMLSFT*VSTLSS
Trigger: AGATGAAAGTGTGGAGACCCAGGTGAATGACAGCAT...CCTAATACTCTTCATAAAAGTATTCTGACAGCCAGTTTTCCACTGCATGTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAATCAACTTTAGATGCATaGTTTTCTGGCACCCTCACT +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQSTLDA*FSGTLT
Trigger: AGTGAGGGTGCCAGAAAACCATGCATCTAAAGTTGA...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CCA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAATCAACTTTAGATGCATaGTTTTCTGGCACCCTCACT +
Preference number: 4 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIESTLDA*FSGTLT
Trigger: AGTGAGGGTGCCAGAAAACCATGCATCTAAAGTTGA...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAAATTGGTATGTTACATaGGGTGCAGGATACCATTGG +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQNWYVT*GAGYHW
Trigger: CCAATGGTATCCTGCACCCCATGTAACATACCAATT...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAAATTGGTATGTTACATaGGGTGCAGGATACCATTGG +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKNWYVT*GAGYHW
Trigger: CCAATGGTATCCTGCACCCCATGTAACATACCAATT...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAACTTGGATGTGCCACATaGACTTGTAGAACTTCTACA +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQLGCAT*TCRTST
Trigger: TGTAGAAGTTCTACAAGTCCATGTGGCACATCCAAG...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAACTCATATCTGGATTTTaGAGGAGGCCCTTTATCTTT +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQLISGF*RRPFIF
Trigger: AAAGATAAAGGGCCTCCTCCAAAATCCAGATATGAG...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGAATACTTAGGGGCATaGTTAAATTACCAGTGTGCG +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKEYLGA*LNYQCA
Trigger: CGCACACTGGTAATTTAACCATGCCCCTAAGTATTC...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAACTTTCCAGTTACCAGTaGCATTCTCCCAAAACTGTT +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKLSSYQ*HSPKTV
Trigger: AACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATATTCATTAAGTGGAAGTaGATCATCATGAAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVIFIKWK*IIMKVF
Trigger: GAAGACCTTCATGATGATCCACTTCCACTTAATGAA...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTTTTTAACTGTCCAATaGTCACTGGAGTTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRFLTVQ*SLEFSG
Trigger: CCCAGAAAACTCCAGTGACCATTGGACAGTTAAAAA...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAGACAGTCTCTTCATGTaGGTGTTTTCATTACAGTTC +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQDSLFM*VFSLQF
Trigger: GAACTGTAATGAAAACACCCACATGAAGAGACTGTC...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR TCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAATCCCATAATTCCTTCTaGCGAGGGCTTTATAATTCT +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQSHNSF*RGLYNS
Trigger: AGAATTATAAAGCCCTCGTCAGAAGGAATTATGGGA...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR TCA 90 bp GGAGGACTGATCTCCTTTACTGATTGGTCTAAATTCAAAAGTGAATTGGTTAAATGTTTGATGGCAGATTaGCCTGAGTTGTTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: GGLISFTDWSKFKSELVKCLMAD*PELLSN
Trigger: GTTTGACAACAACTCAGGTCAATCTGCCATCAAACA...TTTAACCAATTCACTTTTGAATTTAGACCAATCAGTAAAGGAGATCAGTCCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR TCA 90 bp GGAGGACTGATCTCCTTTACTGATTGGTCTAAATTCAAAAGTGAATTGGTTAAAGAAGTGTATAAACACTaGACAGATCTCTTCTCCACC +
Preference number: 4 (lower is better)
Translates to: GGLISFTDWSKFKSELVKEVYKH*TDLFST
Trigger: GGTGGAGAAGAGATCTGTTCAGTGTTTATACACTTC...TTTAACCAATTCACTTTTGAATTTAGACCAATCAGTAAAGGAGATCAGTCCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR TCA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATGGTGTTTCATACCTGTaGGAAGATAAGCTACTAGAA +
Preference number: 4 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNGVSYL*EDKLLE
Trigger: TTCTAGTAGCTTATCTTCTCACAGGTATGAAACACC...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp GGAGGACTGATCTCCTTTACTGATTGGTCTAAATTCAAAAGTGAATTGGTTAAAGGATCATTTTCCGCTTaGTTTGCCTTAACAACCTCT +
Preference number: 4 (lower is better)
Translates to: GGLISFTDWSKFKSELVKGSFSA*FALTTS
Trigger: AGAGGTTGTTAAGGCAAATCAAGCGGAAAATGATCC...TTTAACCAATTCACTTTTGAATTTAGACCAATCAGTAAAGGAGATCAGTCCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR TCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGTCTGCGAGGAAACTTaGTTTCTAGCAAAATCTTGT +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKVCEET*FLAKSC
Trigger: ACAAGATTTTGCTAGAAATCAAGTTTCCTCGCAGAC...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATAAGCTTGGTGAAGAATaGAGGCAAGTAGCTTATACT +
Preference number: 4 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNKLGEE*RQVAYT
Trigger: AGTATAAGCTACTTGCCTTCATTCTTCACCAAGCTT...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp ATAAACATGCAGTGGAAAACTGGCTGTCAGAATACTTTTATGAAGAGTATTAGGAAAGTACAATGCCCGTaGCAGCCAACATTATGTAAC +
Preference number: 4 (lower is better)
Translates to: INMQWKTGCQNTFMKSIRKVQCP*QPTLCN
Trigger: GTTACATAATGTTGGCTGTCACGGGCATTGTACTTT...CCTAATACTCTTCATAAAAGTATTCTGACAGCCAGTTTTCCACTGCATGTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR GCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAATTCTCATTATTCTCCTaGTCAGAGAGCCCATCAATA +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQFSLFS*SESPSI
Trigger: TATTGATGGGCTCTCTGAGCAGGAGAATAATGAGAA...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR GCA 90 bp ATAAACATGCAGTGGAAAACTGGCTGTCAGAATACTTTTATGAAGAGTATTAGGGGAATCACAGAGAGCTaGCGCATTTGTTTCTCATTA +
Preference number: 4 (lower is better)
Translates to: INMQWKTGCQNTFMKSIRGITES*RICFSL
Trigger: TAATGAGAAACAAATGCGGCAGCTCTCTGTGATTCC...CCTAATACTCTTCATAAAAGTATTCTGACAGCCAGTTTTCCACTGCATGTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR GCA 90 bp ATCTCCTTTTCATGGTCAGTCCAAACATTCATAAACTGCCTATCTTTATACACTGGAATCACAGAGAGCTaGCGCATTTGTTTCTCATTA +
Preference number: 4 (lower is better)
Translates to: ISFSWSVQTFINCLSLYTGITES*RICFSL
Trigger: TAATGAGAAACAAATGCGGCAGCTCTCTGTGATTCC...AGTGTATAAAGATAGGCAGTTTATGAATGTTTGGACTGACCATGAAAAGGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR GCA 90 bp ATAAACATGCAGTGGAAAACTGGCTGTCAGAATACTTTTATGAAGAGTATTAGGTCTACTTTTTCTTCTTaGGAGGGTCGAGCAATTTGC +
Preference number: 4 (lower is better)
Translates to: INMQWKTGCQNTFMKSIRSTFSS*EGRAIC
Trigger: GCAAATTGCTCGACCCTCGCAAGAAGAAAAAGTAGA...CCTAATACTCTTCATAAAAGTATTCTGACAGCCAGTTTTCCACTGCATGTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR GCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAATTCCTCAGTTTCTTCTaGTGTACCATCTATCTTGTC +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQFLSFF*CTIYLV
Trigger: GACAAGATAGATGGTACAGCAGAAGAAACTGAGGAA...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR GCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAATTCCTCAGTTTCTTCTaGTGTACCATCTATCTTGTC +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKFLSFF*CTIYLV
Trigger: GACAAGATAGATGGTACAGCAGAAGAAACTGAGGAA...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGGTTTTCTGTTTATGCTaGTGTAAGAGGTTGTCAAGA +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRVFCLC*CKRLSR
Trigger: TCTTGACAACCTCTTACAGCAGCATAAACAGAAAAC...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAGTTTTCTGTTTATGCTaGTGTAAGAGGTTGTCAAGA +
Preference number: 4 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQVFCLC*CKRLSR
Trigger: TCTTGACAACCTCTTACAGCAGCATAAACAGAAAAC...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTGAAGTTTTCTGTTTATaGTGCTGTAAGAGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFEVFCL*CCKRLS
Trigger: TGACAACCTCTTACAGCAGCATAAACAGAAAACTTC...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCCAAGGGGATATACACTaGAAAAAGGTCATCTATTTA +
Preference number: 4 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIQGDIH*KKVIYL
Trigger: TAAATAGATGACCTTTTTGCAGTGTATATCCCCTTG...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAATGGCAGTTCAACTTTTaGGCCAAGACCTTCAAAAAT +
Preference number: 4 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIEWQFNF*AKTFKN
Trigger: ATTTTTGAAGGTCTTGGCCCAAAAGTTGAACTGCCA...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAATGGCAGTTCAACTTTTaGGCCAAGACCTTCAAAAAT +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQWQFNF*AKTFKN
Trigger: ATTTTTGAAGGTCTTGGCCCAAAAGTTGAACTGCCA...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAGTCTTGATGTTCTCATaGTACACCTTGGTATCTGAT +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQVLMFS*YTLVSD
Trigger: ATCAGATACCAAGGTGTACCATGAGAACATCAAGAC...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CCA 90 bp ATAAACATGCAGTGGAAAACTGGCTGTCAGAATACTTTTATGAAGAGTATTAGGGTTGTCAAACTTTATTaGTGTGCCCTGGGAAATGGA +
Preference number: 4 (lower is better)
Translates to: INMQWKTGCQNTFMKSIRVVKLY*CALGNG
Trigger: TCCATTTCCCAGGGCACACCAATAAAGTTTGACAAC...CCTAATACTCTTCATAAAAGTATTCTGACAGCCAGTTTTCCACTGCATGTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CCA 90 bp ATAAACATGCAGTGGAAAACTGGCTGTCAGAATACTTTTATGAAGAGTATTAGGGAATACTTAGGGGCATaGTTAAATTACCAGTGTGCG +
Preference number: 4 (lower is better)
Translates to: INMQWKTGCQNTFMKSIREYLGA*LNYQCA
Trigger: CGCACACTGGTAATTTAACCATGCCCCTAAGTATTC...CCTAATACTCTTCATAAAAGTATTCTGACAGCCAGTTTTCCACTGCATGTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR TCA 90 bp ATCTCCTTTTCATGGTCAGTCCAAACATTCATAAACTGCCTATCTTTATACACTTCCCATAATTCCTTCTaGCGAGGGCTTTATAATTCT +
Preference number: 4 (lower is better)
Translates to: ISFSWSVQTFINCLSLYTSHNSF*RGLYNS
Trigger: AGAATTATAAAGCCCTCGTCAGAAGGAATTATGGGA...AGTGTATAAAGATAGGCAGTTTATGAATGTTTGGACTGACCATGAAAAGGAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR TCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAATTTAAACTGATTTCATaGGCTGTTCTTGGACTCCTA +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKFKLIS*AVLGLL
Trigger: TAGGAGTCCAAGAACAGCTCATGAAATCAGTTTAAA...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR TCA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAAAGCTTCTCTTTAAACTaGTTTCATGAGCTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIESFSLN*FHELFL
Trigger: CAAGAACAGCTCATGAAATCAGTTTAAAGAGAAGCT...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR TCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAAGCTTCTCTTTAAACTaGTTTCATGAGCTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKSFSLN*FHELFL
Trigger: CAAGAACAGCTCATGAAATCAGTTTAAAGAGAAGCT...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAGTTTTCTGTTTATGCTaGTGTAAGAGGTTGTCAAGA +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQVFCLC*CKRLSR
Trigger: TCTTGACAACCTCTTACAGCAGCATAAACAGAAAAC...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR GCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAGAAGTTTTCTGTTTATaGTGCTGTAAGAGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQEVFCL*CCKRLS
Trigger: TGACAACCTCTTACAGCAGCATAAACAGAAAACTTC...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CCA 90 bp ATCTCCTTTTCATGGTCAGTCCAAACATTCATAAACTGCCTATCTTTATACACTTGGCAGTTCAACTTTTaGGCCAAGACCTTCAAAAAT +
Preference number: 4 (lower is better)
Translates to: ISFSWSVQTFINCLSLYTWQFNF*AKTFKN
Trigger: ATTTTTGAAGGTCTTGGCCCAAAAGTTGAACTGCCA...AGTGTATAAAGATAGGCAGTTTATGAATGTTTGGACTGACCATGAAAAGGAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR CCA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGCCAAGTCTCTTTCTTTaGTATTATCACCTTCAACTT +
Preference number: 4 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRPSLFL*YYHLQL
Trigger: AAGTTGAAGGTGATAATACCAAAGAAAGAGACTTGG...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR GCA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAACAAGGGGATATACACTaGAAAAAGGTCATCTATTTA +
Preference number: 4 (lower is better)
Translates to: DLNISTPDTTARGYTLQKQGDIH*KKVIYL
Trigger: TAAATAGATGACCTTTTTGCAGTGTATATCCCCTTG...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CCA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAACCAAGTCTCTTTCTTTaGTATTATCACCTTCAACTT +
Preference number: 4 (lower is better)
Translates to: TVSVRTNIIISWEADNLQPSLFL*YYHLQL
Trigger: AAGTTGAAGGTGATAATACCAAAGAAAGAGACTTGG...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CCA 90 bp ATAAACATGCAGTGGAAAACTGGCTGTCAGAATACTTTTATGAAGAGTATTAGGCATGCAGTGGAAAACTaGCTGTCAGAATACTTTTAT +
Preference number: 4 (lower is better)
Translates to: INMQWKTGCQNTFMKSIRHAVEN*LSEYFY
Trigger: ATAAAAGTATTCTGACAGCCAGTTTTCCACTGCATG...CCTAATACTCTTCATAAAAGTATTCTGACAGCCAGTTTTCCACTGCATGTTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS GCA 90 bp CCTCCGCGGCGTGGTGGGGCGGCGGCGGCCTCCTCTGGCCGGAGCTaGGTACAGGGAAGCCGGTCCCCTCGTGGCTGGGAGCTGGAGGGG +
Preference number: 5 (lower is better)
Translates to: PPRRGGAAAASSGRS*VQGSRSPRGWELEG
Trigger: CCCCTCCAGCTCCCAGCCACGAGGGGACCGGCTTCCCTGTACGCAGCTCCGGCCAGAGGAGGCCGCCGCCGCCCCACCACGCCGCGGAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430577.2
CDS CCA 90 bp GAGCTGGCTAAGCGTGGGAGCCGACGTGCGCCCCGGCCTGAGGAGTaGGACGCGGCCACGGCGCGCGGCCCTACACCGGGACCTCGTTCG +
Preference number: 5 (lower is better)
Translates to: ELAKRGSRRAPRPEE*DAATARGPTPGPRS
Trigger: CGAACGAGGTCCCGGTGTAGGGCCGCGCGCCGTGGCCGCGTCCCACTCCTCAGGCCGGGGCGCACGTCGGCTCCCACGCTTAGCCAGCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268712.8
ENST00000395857.7
ENST00000411510.5
ENST00000436828.5
ENST00000460276.5
ENST00000582357.5
ENST00000585296.1
CDS GCA 90 bp CGCGGCGAGTCGGACGCTCACTCCAGCCGCCGCCGCCGCCGCGGCTaGTGCTTCGCCACCTTGGCCGCCATCTTGACTCAACCCCTCTCC +
Preference number: 5 (lower is better)
Translates to: RGESDAHSSRRRRRG*CFATLAAILTQPLS
Trigger: GGAGAGGGGTTGAGTCAAGATGGCGGCCAAGGTGGCGAAGCAGCAGCCGCGGCGGCGGCGGCGGCTGGAGTGAGCGTCCGACTCGCCGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395857.7
ENST00000585296.1
CDS GCA 90 bp GGCGAGTCGGACGCTCACTCCAGCCGCCGCCGCCGCCGCGGCTGCTaGTTCGCCACCTTGGCCGCCATCTTGACTCAACCCCTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: GESDAHSSRRRRRGC*FATLAAILTQPLSL
Trigger: GAGGGAGAGGGGTTGAGTCAAGATGGCGGCCAAGGTGGCGAAGCAGCAGCCGCGGCGGCGGCGGCGGCTGGAGTGAGCGTCCGACTCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395857.7
ENST00000585296.1
CDS GCA 90 bp CCATGCGCGCCCCGTGGATCCAGGAGTCACGTCATCAGACAGTGCTaGCCGGGCAGCAGCAGTGGCAGAAGCTGCGTCCTTGAGGCTCCG +
Preference number: 5 (lower is better)
Translates to: PCAPRGSRSHVIRQC*PGSSSGRSCVLEAP
Trigger: CGGAGCCTCAAGGACGCAGCTTCTGCCACTGCTGCTGCCCGGGCAGCACTGTCTGATGACGTGACTCCTGGATCCACGGGGCGCGCATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583234.1
CDS CCA 90 bp GGCCTCCTCTGGCCGGAGCTGCGTACAGGGAAGCCGGTCCCCTCGTaGCTGGGAGCTGGAGGGGTGCATTTCGACCTGCCCAAGATACTT +
Preference number: 5 (lower is better)
Translates to: GLLWPELRTGKPVPS*LGAGGVHFDLPKIL
Trigger: AAGTATCTTGGGCAGGTCGAAATGCACCCCTCCAGCTCCCAGCCACGAGGGGACCGGCTTCCCTGTACGCAGCTCCGGCCAGAGGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430577.2
CDS GCA 90 bp TGGTGGGGGCTCTTCAGTAGCCGCTGCGGCTGCAGCACTGGCAGCTaGAGCTTCGTTTGTCATGGACCTGGTGATCCGGCCCTTACGGCG +
Preference number: 5 (lower is better)
Translates to: WWGLFSSRCGCSTGS*SFVCHGPGDPALTA
Trigger: CGCCGTAAGGGCCGGATCACCAGGTCCATGACAAACGAAGCTGCAGCTGCCAGTGCTGCAGCCGCAGCGGCTACTGAAGAGCCCCCACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
ENST00000583226.1
CDS CCA 90 bp CACAGGCTCTGTAGAAATGGGTTCTGGTGGCGGTGGCAGAGGTGGTaGGGGCTCTTCAGTAGCCGCTGCGGCTGCAGCACTGGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: HRLCRNGFWWRWQRW*GLFSSRCGCSTGSC
Trigger: GCAGCTGCCAGTGCTGCAGCCGCAGCGGCTACTGAAGAGCCCCCACCACCTCTGCCACCGCCACCAGAACCCATTTCTACAGAGCCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
ENST00000583226.1
CDS TCA 90 bp CGGCTGCAGCACTGGCAGCTGCAGCTTCGTTTGTCATGGACCTGGTaGTCCGGCCCTTACGGCGGCCCTGACTGTTGGCAGTCTTTCGCC +
Preference number: 5 (lower is better)
Translates to: RLQHWQLQLRLSWTW*SGPYGGPDCWQSFA
Trigger: GGCGAAAGACTGCCAACAGTCAGGGCCGCCGTAAGGGCCGGATCACCAGGTCCATGACAAACGAAGCTGCAGCTGCCAGTGCTGCAGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
ENST00000583226.1
CDS GCA 90 bp TTCTGGTGGCGGTGGCAGAGGTGGTGGGGGCTCTTCAGTAGCCGCTaGGGCTGCAGCACTGGCAGCTGCAGCTTCGTTTGTCATGGACCT +
Preference number: 5 (lower is better)
Translates to: FWWRWQRWWGLFSSR*GCSTGSCSFVCHGP
Trigger: AGGTCCATGACAAACGAAGCTGCAGCTGCCAGTGCTGCAGCCGCAGCGGCTACTGAAGAGCCCCCACCACCTCTGCCACCGCCACCAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
ENST00000583226.1
CDS CCA 90 bp TCCTCTGGCCGGAGCTGCGTACAGGGAAGCCGGTCCCCTCGTGGCTaGGAGCTGGAGGGGTGCATTTCGACCTGCCCAAGATACTTTCTA +
Preference number: 5 (lower is better)
Translates to: SSGRSCVQGSRSPRG*ELEGCISTCPRYFL
Trigger: TAGAAAGTATCTTGGGCAGGTCGAAATGCACCCCTCCAGCTCCCAGCCACGAGGGGACCGGCTTCCCTGTACGCAGCTCCGGCCAGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430577.2
CDS GCA 90 bp CCAAGTGCGTGGGCAGGTGGCTCCGATAAACCTCGCCTGCAGTGCTaGCTCTGTGATGGGGATCAAACGGACTGTGGCTCACGACAGGGT +
Preference number: 5 (lower is better)
Translates to: PSAWAGGSDKPRLQC*LCDGDQTDCGSRQG
Trigger: ACCCTGTCGTGAGCCACAGTCCGTTTGATCCCCATCACAGAGGCAGCACTGCAGGCGAGGTTTATCGGAGCCACCTGCCCACGCACTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
CDS GCA 90 bp GGCTGGATCCAAGTGCGTGGGCAGGTGGCTCCGATAAACCTCGCCTaGAGTGCTGCCTCTGTGATGGGGATCAAACGGACTGTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: GWIQVRGQVAPINLA*SAASVMGIKRTVAH
Trigger: GTGAGCCACAGTCCGTTTGATCCCCATCACAGAGGCAGCACTGCAGGCGAGGTTTATCGGAGCCACCTGCCCACGCACTTGGATCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
CDS GCA 90 bp TGCGTACAGGGAAGCCGGTCCCCTCGTGGCTGGGAGCTGGAGGGGTaGATTTCGACCTGCCCAAGATACTTTCTAGGGCTCTGGCTGGAA +
Preference number: 5 (lower is better)
Translates to: CVQGSRSPRGWELEG*ISTCPRYFLGLWLE
Trigger: TTCCAGCCAGAGCCCTAGAAAGTATCTTGGGCAGGTCGAAATGCACCCCTCCAGCTCCCAGCCACGAGGGGACCGGCTTCCCTGTACGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430577.2
CDS TCA 90 bp GAGAGCAGTGGGGCAGGCTCTCGCTCCCAGATCCTGTTCTGTTGGTaGGGAGCTGCTTGGTTCACCGCAGAGGGAGCACATGCAATCGGT +
Preference number: 5 (lower is better)
Translates to: ESSGAGSRSQILFCW*GAAWFTAEGAHAIG
Trigger: ACCGATTGCATGTGCTCCCTCTGCGGTGAACCAAGCAGCTCCTCACCAACAGAACAGGATCTGGGAGCGAGAGCCTGCCCCACTGCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000464381.5
ENST00000470782.5
ENST00000580617.5
CDS TCA 90 bp CAGACAGTGCTGCCCGGGCAGCAGCAGTGGCAGAAGCTGCGTCCTTaGGGCTCCGCATGTCCTTCAACATCAGACACCATCTCACCCTTG +
Preference number: 5 (lower is better)
Translates to: QTVLPGQQQWQKLRP*GSACPSTSDTISPL
Trigger: CAAGGGTGAGATGGTGTCTGATGTTGAAGGACATGCGGAGCCTCAAGGACGCAGCTTCTGCCACTGCTGCTGCCCGGGCAGCACTGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583234.1
CDS GCA 90 bp GATCCAAGTGCGTGGGCAGGTGGCTCCGATAAACCTCGCCTGCAGTaGTGCCTCTGTGATGGGGATCAAACGGACTGTGGCTCACGACAG +
Preference number: 5 (lower is better)
Translates to: DPSAWAGGSDKPRLQ*CLCDGDQTDCGSRQ
Trigger: CTGTCGTGAGCCACAGTCCGTTTGATCCCCATCACAGAGGCAGCACTGCAGGCGAGGTTTATCGGAGCCACCTGCCCACGCACTTGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
CDS CCA 90 bp GTAAGCAGCCGCTGCAGGATCCAAAGCCCTGTGAAAAGGCATGGCTaGATCCAAGTGCGTGGGCAGGTGGCTCCGATAAACCTCGCCTGC +
Preference number: 5 (lower is better)
Translates to: VSSRCRIQSPVKRHG*IQVRGQVAPINLAC
Trigger: GCAGGCGAGGTTTATCGGAGCCACCTGCCCACGCACTTGGATCCAGCCATGCCTTTTCACAGGGCTTTGGATCCTGCAGCGGCTGCTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
CDS CCA 90 bp GAGCAGCAAGCTGTCCTGTTTCTCATGCACAACCGGAACCTGGGGTaGGGAGATGGGCTCGTAGGGCTCCGAAGAGACGTGACTCCTCTC +
Preference number: 5 (lower is better)
Translates to: EQQAVLFLMHNRNLG*GDGLVGLRRDVTPL
Trigger: GAGAGGAGTCACGTCTCTTCGGAGCCCTACGAGCCCATCTCCCCACCCCAGGTTCCGGTTGTGCATGAGAAACAGGACAGCTTGCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000464381.5
ENST00000470782.5
ENST00000579606.1
ENST00000580554.1
ENST00000583234.1
CDS CCA 90 bp CAGGTAAGCAGCCGCAGGATCCAAAGCCCTGTGAAAAGGCATGGCTaGATCCAAGTGCGTGGGCAGGTGGCTCCGATAAACCTCGCCTGC +
Preference number: 5 (lower is better)
Translates to: QVSSRRIQSPVKRHG*IQVRGQVAPINLAC
Trigger: GCAGGCGAGGTTTATCGGAGCCACCTGCCCACGCACTTGGATCCAGCCATGCCTTTTCACAGGGCTTTGGATCCTGCGGCTGCTTACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
CDS TCA 90 bp TTCATGCAGTGTGGACCTAAGAACGGAGGGGCCAGAGCTTACCACTaGCGTGTGCCGGGAACGCACGGTCTCGCCTGCTTTCACATCCTC +
Preference number: 5 (lower is better)
Translates to: FMQCGPKNGGARAYH*RVPGTHGLACFHIL
Trigger: GAGGATGTGAAAGCAGGCGAGACCGTGCGTTCCCGGCACACGTCAGTGGTAAGCTCTGGCCCCTCCGTTCTTAGGTCCACACTGCATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
CDS TCA 90 bp GGTGAGCGGGCATCATTCCTCTGCTCTGCAGGCTCTGCGCCCCTCTaGGACAAGAGCAGCAAGCTGTCCTGTTTCTCATGCACAACCGGA +
Preference number: 5 (lower is better)
Translates to: GERASFLCSAGSAPL*DKSSKLSCFSCTTG
Trigger: TCCGGTTGTGCATGAGAAACAGGACAGCTTGCTGCTCTTGTCTCAGAGGGGCGCAGAGCCTGCAGAGCAGAGGAATGATGCCCGCTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000464381.5
ENST00000470782.5
ENST00000579606.1
ENST00000580554.1
ENST00000583234.1
CDS GCA 90 bp CCTGAGTTCTTACTGAAGGGGAAGGGGAGCGAACATATCCATGACTaGCAGGTCGGCCAGGCTGTTCTGAGCCTGGCCGCAGGTAGAGGT +
Preference number: 5 (lower is better)
Translates to: PEFLLKGKGSEHIHD*QVGQAVLSLAAGRG
Trigger: ACCTCTACCTGCGGCCAGGCTCAGAACAGCCTGGCCGACCTGGCAGTCATGGATATGTTCGCTCCCCTTCCCCTTCAGTAAGAACTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
ENST00000584872.1
CDS CCA 90 bp CAGGATCCAAAGCCCTGTGAAAAGGCATGGCTGGATCCAAGTGCGTaGGCAGGTGGCTCCGATAAACCTCGCCTGCAGTGCTGCCTCTGT +
Preference number: 5 (lower is better)
Translates to: QDPKPCEKAWLDPSA*AGGSDKPRLQCCLC
Trigger: ACAGAGGCAGCACTGCAGGCGAGGTTTATCGGAGCCACCTGCCCACGCACTTGGATCCAGCCATGCCTTTTCACAGGGCTTTGGATCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
CDS CCA 90 bp ACAGGTAAGCAGCCGCTGCAGGATCCAAAGCCCTGTGAAAAGGCATaGCTGGATCCAAGTGCGTGGGCAGGTGGCTCCGATAAACCTCGC +
Preference number: 5 (lower is better)
Translates to: TGKQPLQDPKPCEKA*LDPSAWAGGSDKPR
Trigger: GCGAGGTTTATCGGAGCCACCTGCCCACGCACTTGGATCCAGCCATGCCTTTTCACAGGGCTTTGGATCCTGCAGCGGCTGCTTACCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
CDS CCA 90 bp ACTGTGGCTCACGACAGGGTCCACCCCAGGCACTGGAGACTTCGCTaGGATACTTTCCCTCTGGGTAGGGGTCAGTGTCGATTTCCTTTC +
Preference number: 5 (lower is better)
Translates to: TVAHDRVHPRHWRLR*DTFPLGRGQCRFPF
Trigger: GAAAGGAAATCGACACTGACCCCTACCCAGAGGGAAAGTATCCCAGCGAAGTCTCCAGTGCCTGGGGTGGACCCTGTCGTGAGCCACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
CDS CCA 90 bp GGTCAGGTCAATGATTCCTCTCGTTGCTGGGTATGGGAGACCCAGTaGCTGCTCTCTTGGGGAGAGTCCTCTGGCCACATCTGGACGCAA +
Preference number: 5 (lower is better)
Translates to: GQVNDSSRCWVWETQ*LLSWGESSGHIWTQ
Trigger: TTGCGTCCAGATGTGGCCAGAGGACTCTCCCCAAGAGAGCAGCCACTGGGTCTCCCATACCCAGCAACGAGAGGAATCATTGACCTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
ENST00000584872.1
CDS CCA 90 bp GAAACAGGTAAGCAGCCGCAGGATCCAAAGCCCTGTGAAAAGGCATaGCTGGATCCAAGTGCGTGGGCAGGTGGCTCCGATAAACCTCGC +
Preference number: 5 (lower is better)
Translates to: ETGKQPQDPKPCEKA*LDPSAWAGGSDKPR
Trigger: GCGAGGTTTATCGGAGCCACCTGCCCACGCACTTGGATCCAGCCATGCCTTTTCACAGGGCTTTGGATCCTGCGGCTGCTTACCTGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
CDS GCA 90 bp GGTCCTCCGTGCACTGGTGTCATCATAAATCCCAGGGCTCAGTTGTaGTTTGGGAGCTTCATGCAGTGTGGACCTAAGAACGGAGGGGCC +
Preference number: 5 (lower is better)
Translates to: GPPCTGVIINPRAQL*FGSFMQCGPKNGGA
Trigger: GGCCCCTCCGTTCTTAGGTCCACACTGCATGAAGCTCCCAAAGCACAACTGAGCCCTGGGATTTATGATGACACCAGTGCACGGAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
CDS GCA 90 bp AGGTCAATGATTCCTCTCGTTGCTGGGTATGGGAGACCCAGTGGCTaGTCTCTTGGGGAGAGTCCTCTGGCCACATCTGGACGCAAGTTC +
Preference number: 5 (lower is better)
Translates to: RSMIPLVAGYGRPSG*SLGESPLATSGRKF
Trigger: GAACTTGCGTCCAGATGTGGCCAGAGGACTCTCCCCAAGAGAGCAGCCACTGGGTCTCCCATACCCAGCAACGAGAGGAATCATTGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
ENST00000584872.1
CDS CCA 90 bp CCTTACGGCGGCCCTGACTGTTGGCAGTCTTTCGCCCCCGGGGTGTaGCTTGCTCTCTTTCCTCAGTTTCTTCTGCTGTACCATCTATCT +
Preference number: 5 (lower is better)
Translates to: PYGGPDCWQSFAPGV*LALFPQFLLLYHLS
Trigger: AGATAGATGGTACAGCAGAAGAAACTGAGGAAAGAGAGCAAGCCACACCCCGGGGGCGAAAGACTGCCAACAGTCAGGGCCGCCGTAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
ENST00000583226.1
CDS CCA 90 bp TGGCACCCTCACTTCAACGTCCACAGAGTCAGCTTTGGTAGCGGGTaGGGGATCACAAACAGAACCCTCTTCAGCACTGTGCTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: WHPHFNVHRVSFGSG*GITNRTLFSTVLLL
Trigger: CAGCAGGAGCACAGTGCTGAAGAGGGTTCTGTTTGTGATCCCCCACCCGCTACCAAAGCTGACTCTGTGGACGTTGAAGTGAGGGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS GCA 90 bp AGTGTGGACCTAAGAACGGAGGGGCCAGAGCTTACCACTGACGTGTaGCGGGAACGCACGGTCTCGCCTGCTTTCACATCCTCATATTTT +
Preference number: 5 (lower is better)
Translates to: SVDLRTEGPELTTDV*RERTVSPAFTSSYF
Trigger: AAAATATGAGGATGTGAAAGCAGGCGAGACCGTGCGTTCCCGGCACACGTCAGTGGTAAGCTCTGGCCCCTCCGTTCTTAGGTCCACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
CDS GCA 90 bp GTTCTGTTGGTGAGGAGCTGCTTGGTTCACCGCAGAGGGAGCACATaGAATCGGTGTTGGTGGAGTACTGCTGAGCATCCGCATAGTCAG +
Preference number: 5 (lower is better)
Translates to: VLLVRSCLVHRRGST*NRCWWSTAEHPHSQ
Trigger: CTGACTATGCGGATGCTCAGCAGTACTCCACCAACACCGATTGCATGTGCTCCCTCTGCGGTGAACCAAGCAGCTCCTCACCAACAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000464381.5
ENST00000470782.5
ENST00000580617.5
CDS TCA 90 bp ATCCACATCCTCATCAGCGCTGCACGTGGCACTGGAATCATTGTCTaGCTGGGGCTCGGGCCTTTGGGCATTTATTTGCTGAGCTACCAC +
Preference number: 5 (lower is better)
Translates to: IHILISAARGTGIIV*LGLGPLGIYLLSYH
Trigger: GTGGTAGCTCAGCAAATAAATGCCCAAAGGCCCGAGCCCCAGTCAGACAATGATTCCAGTGCCACGTGCAGCGCTGATGAGGATGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS TCA 90 bp AACCTCTGGCTGATAGGTCTGCAGTTTCTCCTGGGGTGGCGCAGGTaGGCTGGCAGGACTTATCACCTCAATAGCATCGCTAGGTGTTTC +
Preference number: 5 (lower is better)
Translates to: NLWLIGLQFLLGWRR*AGRTYHLNSIARCF
Trigger: GAAACACCTAGCGATGCTATTGAGGTGATAAGTCCTGCCAGCTCACCTGCGCCACCCCAGGAGAAACTGCAGACCTATCAGCCAGAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
CDS TCA 90 bp CACTATAGCGGGCTGCACTCATATCAGGCTGTGGAGCGGCTTTACTaGCTTCTCTTGGAGAAAGCCTACACGGTGAGGCTGACCTTGCTG +
Preference number: 5 (lower is better)
Translates to: HYSGLHSYQAVERLY*LLLEKAYTVRLTLL
Trigger: CAGCAAGGTCAGCCTCACCGTGTAGGCTTTCTCCAAGAGAAGTCAGTAAAGCCGCTCCACAGCCTGATATGAGTGCAGCCCGCTATAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436068.1
CDS CCA 90 bp AGGAGCTGCTTGGTTCACCGCAGAGGGAGCACATGCAATCGGTGTTaGTGGAGTACTGCTGAGCATCCGCATAGTCAGAGGGTTATAAGG +
Preference number: 5 (lower is better)
Translates to: RSCLVHRRGSTCNRC*WSTAEHPHSQRVIR
Trigger: CCTTATAACCCTCTGACTATGCGGATGCTCAGCAGTACTCCACCAACACCGATTGCATGTGCTCCCTCTGCGGTGAACCAAGCAGCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000464381.5
ENST00000470782.5
ENST00000580617.5
CDS-3UTR CAA 90 bp GAGGATGGAGGGAGTGGTTCACAGCACCTCACCTTCGGGTCCTCAGGTAGAACTCAGCTGGTTTTGTACTaGGAACTGCTAAGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: EDGGSGSQHLTFGSSGRTQLVLY*ELLRRE
Trigger: CTCCCTCCTTAGCAGTTCCAAGTACAAAACCAGCTG...AGTTCTACCTGAGGACCCGAAGGTGAGGTGCTGTGAACCACTCCCTCCATCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CAA 90 bp GAGGATGGAGGGAGTGGTTCACAGCACCTCACCTTCGGGTCCTCAGGTAGAACTCGGCTTGGGTGTTTCTaGAGTGTAGGAAGCCTGATT +
Preference number: 5 (lower is better)
Translates to: EDGGSGSQHLTFGSSGRTRLGCF*SVGSLI
Trigger: AATCAGGCTTCCTACACTCAAGAAACACCCAAGCCG...AGTTCTACCTGAGGACCCGAAGGTGAGGTGCTGTGAACCACTCCCTCCATCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS GCA 90 bp CTTTCTAGGGCTCTGGCTGGAATTCGCACCAAGCCCTCACTGAAATaGTGGGCGAGGCCGATTTGTCCACGATGTTGCTCCTTAACTTCT +
Preference number: 5 (lower is better)
Translates to: LSRALAGIRTKPSLK*WARPICPRCCSLTS
Trigger: AGAAGTTAAGGAGCAACATCGTGGACAAATCGGCCTCGCCCAGCATTTCAGTGAGGGCTTGGTGCGAATTCCAGCCAGAGCCCTAGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430577.2
CDS CCA 90 bp TACTTGGAACTGCTAAGGAGGGAGATGTACTGGGTGCAGTTTCCGTaGTGGGCTCAAGCTCAACCGCAGGTTCTGTGTTTCCTCGAGAAG +
Preference number: 5 (lower is better)
Translates to: YLELLRREMYWVQFP*WAQAQPQVLCFLEK
Trigger: CTTCTCGAGGAAACACAGAACCTGCGGTTGAGCTTGAGCCCACCACGGAAACTGCACCCAGTACATCTCCCTCCTTAGCAGTTCCAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS CCA 90 bp CTTCAGCTGGTTTTGTACTTGGAACTGCTAAGGAGGGAGATGTACTaGGTGCAGTTTCCGTGGTGGGCTCAAGCTCAACCGCAGGTTCTG +
Preference number: 5 (lower is better)
Translates to: LQLVLYLELLRREMY*VQFPWWAQAQPQVL
Trigger: CAGAACCTGCGGTTGAGCTTGAGCCCACCACGGAAACTGCACCCAGTACATCTCCCTCCTTAGCAGTTCCAAGTACAAAACCAGCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS CCA 90 bp CTGGCAGCTTCATGCTTACTCTCTTTTGTTTTGGACACATCCATCTaGGGTGCAGAAGCTGCAGCATCCACAAGAGCAGCCAGGGCATCC +
Preference number: 5 (lower is better)
Translates to: LAASCLLSFVLDTSI*GAEAAASTRAARAS
Trigger: GGATGCCCTGGCTGCTCTTGTGGATGCTGCAGCTTCTGCACCCCAGATGGATGTGTCCAAAACAAAAGAGAGTAAGCATGAAGCTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
CDS-3UTR CAA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACGTGGCACTGGAATCATaGTCTGACTGGGGCTCGGGC +
Preference number: 5 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHVALES*SDWGSG
Trigger: GCCCGAGCCCCAGTCAGACAATGATTCCAGTGCCAC...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS CCA 90 bp TCTAGGGCTCTGGCTGGAATTCGCACCAAGCCCTCACTGAAATGCTaGGCGAGGCCGATTTGTCCACGATGTTGCTCCTTAACTTCTAAT +
Preference number: 5 (lower is better)
Translates to: SRALAGIRTKPSLKC*ARPICPRCCSLTSN
Trigger: ATTAGAAGTTAAGGAGCAACATCGTGGACAAATCGGCCTCGCCCAGCATTTCAGTGAGGGCTTGGTGCGAATTCCAGCCAGAGCCCTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430577.2
CDS-3UTR CAA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCCCCCCGGGGTGTGGCTaGCTCTCTTTCCTCAGTTTC +
Preference number: 5 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAPPGCG*LSFLSF
Trigger: GAAACTGAGGAAAGAGAGCAAGCCACACCCCGGGGG...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
52% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS TCA 90 bp TGTGCTCCTGCTGATCTACATCCATCTGCTCTGCTGTCTCAGCACTaGTGCTGTCATTCACCTGGGTCTCCACACTTTCATCTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: CAPADLHPSALLSQH*CCHSPGSPHFHLQL
Trigger: CAGCTGAAGATGAAAGTGTGGAGACCCAGGTGAATGACAGCATCAGTGCTGAGACAGCAGAGCAGATGGATGTAGATCAGCAGGAGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS TCA 90 bp CATGGGGTGCAGGATACCATTGGTGGGATAACAGCAGCTCGATGCTaGAGCTGTGGCAGATCCAGTGGATTTGGTTTTAACGGAGATGAG +
Preference number: 5 (lower is better)
Translates to: HGVQDTIGGITAARC*SCGRSSGFGFNGDE
Trigger: CTCATCTCCGTTAAAACCAAATCCACTGGATCTGCCACAGCTTCAGCATCGAGCTGCTGTTATCCCACCAATGGTATCCTGCACCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS TCA 90 bp GGCAGATTCCTGTTGCCGTGGCAGTCCAAGAGAGATAGATCCCACTaGCGGCTTGGGTGTTTCTTGAGTGTAGGAAGCCTGATTATGAGA +
Preference number: 5 (lower is better)
Translates to: GRFLLPWQSKRDRSH*RLGCFLSVGSLIMR
Trigger: TCTCATAATCAGGCTTCCTACACTCAAGAAACACCCAAGCCGTCAGTGGGATCTATCTCTCTTGGACTGCCACGGCAACAGGAATCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS TCA 90 bp GGCTGGGGCTTGCCACTTGGAAAGGCTGAAGAAGTGTATAAACACTaGACAGATCTCTTCTCCACCTCCAGGGTTTTCTGCTCTAGCTGC +
Preference number: 5 (lower is better)
Translates to: GWGLPLGKAEEVYKH*TDLFSTSRVFCSSC
Trigger: GCAGCTAGAGCAGAAAACCCTGGAGGTGGAGAAGAGATCTGTTCAGTGTTTATACACTTCTTCAGCCTTTCCAAGTGGCAAGCCCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
CDS TCA 90 bp AGGCCTTCCCCTGGATTTGTCCACAAGATTTTCTGGAGAGACCCTTaGACCTGGTCTTTGATGATGGACAGACTGAGCCTGGGATTCTGG +
Preference number: 5 (lower is better)
Translates to: RPSPGFVHKIFWRDP*TWSLMMDRLSLGFW
Trigger: CCAGAATCCCAGGCTCAGTCTGTCCATCATCAAAGACCAGGTTCAAGGGTCTCTCCAGAAAATCTTGTGGACAAATCCAGGGGAAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579606.1
CDS CCA 90 bp AATGTGTCGCTGGTAGAGAGCATAGCCGCTCACTGGGGTTCCAATTaGTATGTTACATGGGGTGCAGGATACCATTGGTGGGATAACAGC +
Preference number: 5 (lower is better)
Translates to: NVSLVESIAAHWGSN*YVTWGAGYHWWDNS
Trigger: GCTGTTATCCCACCAATGGTATCCTGCACCCCATGTAACATACCAATTGGAACCCCAGTGAGCGGCTATGCTCTCTACCAGCGACACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS CCA 90 bp TGGATGCAGCTTCCTCTCTGCCTTTCTCAGGACTGCTGTCTTCAATaGGCATTCTCGAAATGGACCCCTTCACCAAAGCCTCTGTTGGTA +
Preference number: 5 (lower is better)
Translates to: WMQLPLCLSQDCCLQ*AFSKWTPSPKPLLV
Trigger: TACCAACAGAGGCTTTGGTGAAGGGGTCCATTTCGAGAATGCCCATTGAAGACAGCAGTCCTGAGAAAGGCAGAGAGGAAGCTGCATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
CDS CCA 90 bp CTCTGGACATGGTGTTTTGATAACTCACAGGGGTCCTCCGTGCACTaGTGTCATCATAAATCCCAGGGCTCAGTTGTGCTTTGGGAGCTT +
Preference number: 5 (lower is better)
Translates to: LWTWCFDNSQGSSVH*CHHKSQGSVVLWEL
Trigger: AAGCTCCCAAAGCACAACTGAGCCCTGGGATTTATGATGACACCAGTGCACGGAGGACCCCTGTGAGTTATCAAAACACCATGTCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
CDS-3UTR CAA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATGCCTGGTTGGTCGAGTaGTCGGAAGCCGAACGCCTT +
Preference number: 5 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNAWLVE*SEAERL
Trigger: AAGGCGTTCGGCTTCCGACAACTCGACCAACCAGGC...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAGGGGCGGTGGCCTGGTaGGTCGAGTTGTCGGAAGCC +
Preference number: 5 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQGAVAW*VELSEA
Trigger: GGCTTCCGACAACTCGACCAACCAGGCCACCGCCCC...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACTCACCAAAGCCTCTGTaGGTATGCCAGTCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHSPKPL*VCQSGA
Trigger: TGCCCCAGACTGGCATACCAACAGAGGCTTTGGTGA...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCCAGCTGCAAGGTGTGTaGGGTGTCCTGGAGACATGG +
Preference number: 5 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAQLQGV*GVLETW
Trigger: CCATGTCTCCAGGACACCCAACACACCTTGCAGCTG...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATCGTTCCCTCGCATCCTaGTCCGAGGCAATTTGCCGG +
Preference number: 5 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNRSLAS*SEAICR
Trigger: CCGGCAAATTGCCTCGGACAAGGATGCGAGGGAACG...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS TCA 90 bp ACTAGTTCTCCTTTCTTGAGGCCTGTCAGAACCTGGGTGAAATTCTaGAAGCAAGGAAGGTCGCCTTCGAAGCTGTTGCTGCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: TSSPFLRPVRTWVKF*KQGRSPSKLLLLLL
Trigger: CAACAGCAGCAGCAACAGCTTCGAAGGCGACCTTCCTTGCTTTCAGAATTTCACCCAGGTTCTGACAGGCCTCAAGAAAGGAGAACTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000411510.5
ENST00000430577.2
ENST00000436828.5
ENST00000582357.5
ENST00000585296.1
CDS TCA 90 bp CAAATCTATCTGTTCTTGTCTCTGCCGCTGCTCCTCCAGGAGTGCTaGCTCATGCATTGCTTTAATGTGTCGCTGGTAGAGAGCATAGCC +
Preference number: 5 (lower is better)
Translates to: QIYLFLSLPLLLQEC*LMHCFNVSLVESIA
Trigger: GGCTATGCTCTCTACCAGCGACACATTAAAGCAATGCATGAGTCAGCACTCCTGGAGGAGCAGCGGCAGAGACAAGAACAGATAGATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS TCA 90 bp TGCATTATGGAGCCAGACAATACAGTCCTTTCTTTGAGGTCAGAATaGGGACTCCCCCTGGGTAATGCTCGGCATATCAGCCCCTCTAAC +
Preference number: 5 (lower is better)
Translates to: CIMEPDNTVLSLRSE*GLPLGNARHISPSN
Trigger: GTTAGAGGGGCTGATATGCCGAGCATTACCCAGGGGGAGTCCTCATTCTGACCTCAAAGAAAGGACTGTATTGTCTGGCTCCATAATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
CDS TCA 90 bp TTGGTGTCCCCTGCATTATGGAGCCAGACAATACAGTCCTTTCTTTaGGGTCAGAATGAGGACTCCCCCTGGGTAATGCTCGGCATATCA +
Preference number: 5 (lower is better)
Translates to: LVSPALWSQTIQSFL*GQNEDSPWVMLGIS
Trigger: TGATATGCCGAGCATTACCCAGGGGGAGTCCTCATTCTGACCTCAAAGAAAGGACTGTATTGTCTGGCTCCATAATGCAGGGGACACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
CDS TCA 90 bp CTCCATTGCGTAAAGCTGATACTGACTTGGGTAACCTGGAGTTGGTaGAAGCTGTCTCTGAAACAGGTAAGCAGCCGCTGCAGGATCCAA +
Preference number: 5 (lower is better)
Translates to: LHCVKLILTWVTWSW*KLSLKQVSSRCRIQ
Trigger: TTGGATCCTGCAGCGGCTGCTTACCTGTTTCAGAGACAGCTTTCACCAACTCCAGGTTACCCAAGTCAGTATCAGCTTTACGCAATGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
CDS TCA 90 bp CCTACTTCCCCTGGATTTGTCCACAAGATTTTCTGGAGAGACCCTTaGACCTGGTCTTTGATGATGGACAGACTGAGCCTGGGATTCTGG +
Preference number: 5 (lower is better)
Translates to: PTSPGFVHKIFWRDP*TWSLMMDRLSLGFW
Trigger: CCAGAATCCCAGGCTCAGTCTGTCCATCATCAAAGACCAGGTTCAAGGGTCTCTCCAGAAAATCTTGTGGACAAATCCAGGGGAAGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000464381.5
ENST00000470782.5
ENST00000580554.1
CDS TCA 90 bp CTCCATTGCGTAAAGCTGATACTGACTTGGGTAACCTGGAGTTGGTaGAAGCTGTCTCTGAAACAGGTAAGCAGCCGCAGGATCCAAAGC +
Preference number: 5 (lower is better)
Translates to: LHCVKLILTWVTWSW*KLSLKQVSSRRIQS
Trigger: GCTTTGGATCCTGCGGCTGCTTACCTGTTTCAGAGACAGCTTTCACCAACTCCAGGTTACCCAAGTCAGTATCAGCTTTACGCAATGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
CDS CCA 90 bp CTTGAGGCTCCGCATGTCCTTCAACATCAGACACCATCTCACCCTTaGCTCCTTAGTCCAGGTGAAACCTCAAGGGTTTTCCTACCTATT +
Preference number: 5 (lower is better)
Translates to: LEAPHVLQHQTPSHP*LLSPGETSRVFLPI
Trigger: AATAGGTAGGAAAACCCTTGAGGTTTCACCTGGACTAAGGAGCCAAGGGTGAGATGGTGTCTGATGTTGAAGGACATGCGGAGCCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583234.1
CDS-3UTR CAA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATTCCACAGAGTCAGCTTaGGTAGCGGGTGGGGGATCA +
Preference number: 5 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNSTESA*VAGGGS
Trigger: TGATCCCCCACCCGCTACCAAAGCTGACTCTGTGGA...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGGTGGCACTGGAATCATaGTCTGACTGGGGCTCGGGC +
Preference number: 5 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRVALES*SDWGSG
Trigger: GCCCGAGCCCCAGTCAGACAATGATTCCAGTGCCAC...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGGGCGGTGGCCTGGTaGGTCGAGTTGTCGGAAGCC +
Preference number: 5 (lower is better)
Translates to: DLNISTPDTTARGYTLQKGAVAW*VELSEA
Trigger: GGCTTCCGACAACTCGACCAACCAGGCCACCGCCCC...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCGGGCTCAGTTGTGCTTaGGGAGCTTCATGCAGTGTG +
Preference number: 5 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAGLSCA*GASCSV
Trigger: CACACTGCATGAAGCTCCCAAAGCACAACTGAGCCC...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGCCATGGGAGGAGTGCTaGTTCCCCCTGGATGAGGCA +
Preference number: 5 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRPWEEC*FPLDEA
Trigger: TGCCTCATCCAGGGGGAACAAGCACTCCTCCCATGG...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCATGGGTCCTGGGCACTaGCCCCATTCCCTCTGCCTG +
Preference number: 5 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIMGPGH*PHSLCL
Trigger: CAGGCAGAGGGAATGGGGCAAGTGCCCAGGACCCAT...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTTGGTGAGGAGCTGCTaGGTTCACCGCAGAGGGAGC +
Preference number: 5 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRLVRSC*VHRRGS
Trigger: GCTCCCTCTGCGGTGAACCAAGCAGCTCCTCACCAA...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS TCA 90 bp GAATCATTGTCTGACTGGGGCTCGGGCCTTTGGGCATTTATTTGCTaGGCTACCACCAAATCTTCATCTCTAGGTTCCACCTTCTCACTG +
Preference number: 5 (lower is better)
Translates to: ESLSDWGSGLWAFIC*ATTKSSSLGSTFSL
Trigger: CAGTGAGAAGGTGGAACCTAGAGATGAAGATTTGGTGGTAGCTCAGCAAATAAATGCCCAAAGGCCCGAGCCCCAGTCAGACAATGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS TCA 90 bp ATACCTTCCCCTGGATTTGTCCACAAGATTTTCTGGAGAGACCCTTaGACCTGGTCTTTGATGATGGACAGACTGAGCCTGGGATTCTGG +
Preference number: 5 (lower is better)
Translates to: IPSPGFVHKIFWRDP*TWSLMMDRLSLGFW
Trigger: CCAGAATCCCAGGCTCAGTCTGTCCATCATCAAAGACCAGGTTCAAGGGTCTCTCCAGAAAATCTTGTGGACAAATCCAGGGGAAGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472189.1
CDS CCA 90 bp ATGCATTGCTTTAATGTGTCGCTGGTAGAGAGCATAGCCGCTCACTaGGGTTCCAATTGGTATGTTACATGGGGTGCAGGATACCATTGG +
Preference number: 5 (lower is better)
Translates to: MHCFNVSLVESIAAH*GSNWYVTWGAGYHW
Trigger: CCAATGGTATCCTGCACCCCATGTAACATACCAATTGGAACCCCAGTGAGCGGCTATGCTCTCTACCAGCGACACATTAAAGCAATGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS CCA 90 bp GTTTTAGTCCTCACAGGTGTAGATACCAAAGCAGAAGGTGAGTTCTaGAATGTAGAAGTAGGAGGCTGCTGGGGAGTCTGCGAGGAAACT +
Preference number: 5 (lower is better)
Translates to: VLVLTGVDTKAEGEF*NVEVGGCWGVCEET
Trigger: AGTTTCCTCGCAGACTCCCCAGCAGCCTCCTACTTCTACATTCCAGAACTCACCTTCTGCTTTGGTATCTACACCTGTGAGGACTAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000464381.5
ENST00000470782.5
ENST00000472189.1
ENST00000579606.1
ENST00000580554.1
CDS CCA 90 bp ATTTCTGCCAACCAGCATATTTTACCTCTGACTACACCTTCATGTTaGGCCCTGACCAACAGACCCTCAGGTTGTGAGTTTTGGCTTCGG +
Preference number: 5 (lower is better)
Translates to: ISANQHILPLTTPSC*ALTNRPSGCEFWLR
Trigger: CCGAAGCCAAAACTCACAACCTGAGGGTCTGTTGGTCAGGGCCCAACATGAAGGTGTAGTCAGAGGTAAAATATGCTGGTTGGCAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458113.6
CDS-3UTR CAA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACCAGCTGGTTTTGTACTaGGAACTGCTAAGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHQLVLY*ELLRRE
Trigger: CTCCCTCCTTAGCAGTTCCAAGTACAAAACCAGCTG...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACCGGCTTGGGTGTTTCTaGAGTGTAGGAAGCCTGATT +
Preference number: 5 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHRLGCF*SVGSLI
Trigger: AATCAGGCTTCCTACACTCAAGAAACACCCAAGCCG...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACCTCTCCACTGAAATTTaGCTGGTTGGAGTTCCCCGA +
Preference number: 5 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHLSTEI*LVGVPR
Trigger: TCGGGGAACTCCAACCAGCAAAATTTCAGTGGAGAG...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACGAACGCCCCATTTCTTaGATGGTGGTGATGCCATCA +
Preference number: 5 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHERPIS*MVVMPS
Trigger: TGATGGCATCACCACCATCAAAGAAATGGGGCGTTC...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGGTTCCCTCTCAGCACTaGCAGCAGCTGCAAGGTGTG +
Preference number: 5 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRVPSQH*QQLQGV
Trigger: CACACCTTGCAGCTGCTGCAAGTGCTGAGAGGGAAC...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGGCAGGCCTTGGCTTATaGAAGGGCCCCCAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRAGLGL*KGPQQA
Trigger: TGCCTGCTGGGGGCCCTTCAATAAGCCAAGGCCTGC...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGATGGGTCCTGGGCACTaGCCCCATTCCCTCTGCCTG +
Preference number: 5 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRMGPGH*PHSLCL
Trigger: CAGGCAGAGGGAATGGGGCAAGTGCCCAGGACCCAT...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATCTGTCCTCGCTGGGCTaGACAGCTTCAACTGGTGAA +
Preference number: 5 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNLSSLG*TASTGE
Trigger: TTCACCAGTTGAAGCTGTCAAGCCCAGCGAGGACAG...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395851.5
ENST00000395857.7
CDS TCA 90 bp AGCATTTTCAGGACTGTCCTCGCTGGGCTTGACAGCTTCAACTGGTaGAGGAGAAGGAGCACTTTCTGTATCAGAACTATTTTCTGCACC +
Preference number: 5 (lower is better)
Translates to: SIFRTVLAGLDSFNW*RRRSTFCIRTIFCT
Trigger: GGTGCAGAAAATAGTTCTGATACAGAAAGTGCTCCTTCTCCTTCACCAGTTGAAGCTGTCAAGCCCAGCGAGGACAGTCCTGAAAATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS GCA 90 bp TTATTGGTGTGCCCTGGGAAATGGAACCCTCAATTATCGGCCGTGTaGTCTGGACCACTTCTGGAGTTTTCCGACTTTCCTGAGTTAAAA +
Preference number: 5 (lower is better)
Translates to: LLVCPGKWNPQLSAV*SGPLLEFSDFPELK
Trigger: TTTTAACTCAGGAAAGTCGGAAAACTCCAGAAGTGGTCCAGAGCACACGGCCGATAATTGAGGGTTCCATTTCCCAGGGCACACCAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
CDS CCA 90 bp ACATCCATCTGCTCTGCTGTCTCAGCACTGATGCTGTCATTCACCTaGGTCTCCACACTTTCATCTTCAGCTGGTTTTGTACTTGGAACT +
Preference number: 5 (lower is better)
Translates to: TSICSAVSALMLSFT*VSTLSSSAGFVLGT
Trigger: AGTTCCAAGTACAAAACCAGCTGAAGATGAAAGTGTGGAGACCCAGGTGAATGACAGCATCAGTGCTGAGACAGCAGAGCAGATGGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS CCA 90 bp ATAATGTCTTCCAGCCCAAGATTACTGGCAGGATCAGCAAAAGAATaGCCTCTAGAGCTAACTGAGCCTGACGTAGTAACTGCTGGCAGA +
Preference number: 5 (lower is better)
Translates to: IMSSSPRLLAGSAKE*PLELTEPDVVTAGR
Trigger: TCTGCCAGCAGTTACTACGTCAGGCTCAGTTAGCTCTAGAGGCCATTCTTTTGCTGATCCTGCCAGTAATCTTGGGCTGGAAGACATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000464381.5
ENST00000470782.5
ENST00000579573.2
ENST00000580554.1
ENST00000582565.1
CDS CCA 90 bp AAGAAACATCAGAAGTTCTGTTCATCATGGGTGAGCCTCTGGACATaGTGTTTTGATAACTCACAGGGGTCCTCCGTGCACTGGTGTCAT +
Preference number: 5 (lower is better)
Translates to: KKHQKFCSSWVSLWT*CFDNSQGSSVHWCH
Trigger: ATGACACCAGTGCACGGAGGACCCCTGTGAGTTATCAAAACACCATGTCCAGAGGCTCACCCATGATGAACAGAACTTCTGATGTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395857.7
CDS-3UTR CAA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCACTAGTTCTCCTTTCTaGAGGCCTGTCAGAACCTGG +
Preference number: 5 (lower is better)
Translates to: GILRGMVKLPVCVTVRYATSSPF*RPVRTW
Trigger: CCAGGTTCTGACAGGCCTCAAGAAAGGAGAACTAGT...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395851.5
CDS-3UTR CAA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTACCCCCGGGGTGTGGCTaGCTCTCTTTCCTCAGTTTC +
Preference number: 5 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLPPGCG*LSFLSF
Trigger: GAAACTGAGGAAAGAGAGCAAGCCACACCCCGGGGG...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATACTGTCCTCGCTGGGCTaGACAGCTTCAACTTCGCTG +
Preference number: 5 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVILSSLG*TASTSL
Trigger: CAGCGAAGTTGAAGCTGTCAAGCCCAGCGAGGACAG...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CAA 90 bp CTCCAGGTGATGGTAAATAAAGTAATACGCACATGCATTATGATGAGGATGGAGTCCACAGAGTCAGCTTaGGTAGCGGGTGGGGGATCA +
Preference number: 5 (lower is better)
Translates to: LQVMVNKVIRTCIMMRMESTESA*VAGGGS
Trigger: TGATCCCCCACCCGCTACCAAAGCTGACTCTGTGGA...CTCCATCCTCATCATAATGCATGTGCGTATTACTTTATTTACCATCACCTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CAA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAGTGGCACTGGAATCATaGTCTGACTGGGGCTCGGGC +
Preference number: 5 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQVALES*SDWGSG
Trigger: GCCCGAGCCCCAGTCAGACAATGATTCCAGTGCCAC...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCCAAATCTATCTGTTCTaGTCTCTGCCGCTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAQIYLF*SLPLLL
Trigger: GAGGAGCAGCGGCAGAGACAAGAACAGATAGATTTG...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTAGCCTGGTTGGTCGAGTaGTCGGAAGCCGAACGCCTT +
Preference number: 5 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLAWLVE*SEAERL
Trigger: AAGGCGTTCGGCTTCCGACAACTCGACCAACCAGGC...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGGAAGCCACTGTGGTTTaGGATGACGGGATGAGAGGG +
Preference number: 5 (lower is better)
Translates to: CADLNISTPDTTARGYTLEATVV*DDGMRG
Trigger: CCCTCTCATCCCGTCATCCAAAACCACAGTGGCTTC...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGGACTACACCTTCATGTaGGGCCCTGACCAACAGACC +
Preference number: 5 (lower is better)
Translates to: CADLNISTPDTTARGYTLDYTFM*GPDQQT
Trigger: GGTCTGTTGGTCAGGGCCCAACATGAAGGTGTAGTC...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGTCACCAAAGCCTCTGTaGGTATGCCAGTCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: CADLNISTPDTTARGYTLSPKPL*VCQSGA
Trigger: TGCCCCAGACTGGCATACCAACAGAGGCTTTGGTGA...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAACCATGGGAGGAGTGCTaGTTCCCCCTGGATGAGGCA +
Preference number: 5 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQPWEEC*FPLDEA
Trigger: TGCCTCATCCAGGGGGAACAAGCACTCCTCCCATGG...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGCCATGGGAGGAGTGCTaGTTCCCCCTGGATGAGGCA +
Preference number: 5 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRPWEEC*FPLDEA
Trigger: TGCCTCATCCAGGGGGAACAAGCACTCCTCCCATGG...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGGACATGGAAGCAGAGTaGTACGGCCTGGGAGGGAAA +
Preference number: 5 (lower is better)
Translates to: CADLNISTPDTTARGYTLDMEAE*YGLGGK
Trigger: TTTCCCTCCCAGGCCGTACAACTCTGCTTCCATGTC...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATACAGCTGCAAGGTGTGTaGGGTGTCCTGGAGACATGG +
Preference number: 5 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVIQLQGV*GVLETW
Trigger: CCATGTCTCCAGGACACCCAACACACCTTGCAGCTG...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGCAGGCCTTGGCTTATaGAAGGGCCCCCAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: DLNISTPDTTARGYTLQKAGLGL*KGPQQA
Trigger: TGCCTGCTGGGGGCCCTTCAATAAGCCAAGGCCTGC...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAAATGGGTCCTGGGCACTaGCCCCATTCCCTCTGCCTG +
Preference number: 5 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIEMGPGH*PHSLCL
Trigger: CAGGCAGAGGGAATGGGGCAAGTGCCCAGGACCCAT...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTTTGGTGAGGAGCTGCTaGGTTCACCGCAGAGGGAGC +
Preference number: 5 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFLVRSC*VHRRGS
Trigger: GCTCCCTCTGCGGTGAACCAAGCAGCTCCTCACCAA...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATCCAGATCCTGTTCTGTaGGTGAGGAGCTGCTTGGTT +
Preference number: 5 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNPDPVL*VRSCLV
Trigger: AACCAAGCAGCTCCTCACCAACAGAACAGGATCTGG...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATGTTGGTCTTGCTATCTaGGGTGGCAGAGGTGGAAGA +
Preference number: 5 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNVGLAI*GGRGGR
Trigger: TCTTCCACCTCTGCCACCCAAGATAGCAAGACCAAC...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGGAGAAGGGGTTGGTCTaGCTATCTTGGGTGGCAGAG +
Preference number: 5 (lower is better)
Translates to: CADLNISTPDTTARGYTLEKGLV*LSWVAE
Trigger: CTCTGCCACCCAAGATAGCAAGACCAACCCCTTCTC...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGGAGAAGGGGTTGGTCTaGCTATCTTGGGTGGCAGAG +
Preference number: 5 (lower is better)
Translates to: RKGILRGMVKLPVCVTVREKGLV*LSWVAE
Trigger: CTCTGCCACCCAAGATAGCAAGACCAACCCCTTCTC...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCTGTCCTCGCTGGGCTaGACAGCTTCAACTGGTGAA +
Preference number: 5 (lower is better)
Translates to: CADLNISTPDTTARGYTLLSSLG*TASTGE
Trigger: TTCACCAGTTGAAGCTGTCAAGCCCAGCGAGGACAG...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395851.5
ENST00000395857.7
CDS TCA 90 bp GGTAGACTTGTTAGAAGAAACATCAGAAGTTCTGTTCATCATGGGTaGGCCTCTGGACATGGTGTTTTGATAACTCACAGGGGTCCTCCG +
Preference number: 5 (lower is better)
Translates to: GRLVRRNIRSSVHHG*ASGHGVLITHRGPP
Trigger: CGGAGGACCCCTGTGAGTTATCAAAACACCATGTCCAGAGGCTCACCCATGATGAACAGAACTTCTGATGTTTCTTCTAACAAGTCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395857.7
CDS TCA 90 bp TTGCTGCAGTATTGTGCATCTGTGCTTCCTGTTCTAGAGCACGTTTaGCCTCAGCATAAGGCATATAGGCGACTGATTTTCCTTCCCACT +
Preference number: 5 (lower is better)
Translates to: LLQYCASVLPVLEHV*PQHKAYRRLIFLPT
Trigger: AGTGGGAAGGAAAATCAGTCGCCTATATGCCTTATGCTGAGGTCAAACGTGCTCTAGAACAGGAAGCACAGATGCACAATACTGCAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436068.1
CDS-3UTR CAA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTCGCCTTCGAAGCTGTaGCTGCTGCTGTTGCTGCAA +
Preference number: 5 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLISPSKL*LLLLLQ
Trigger: TTGCAGCAACAGCAGCAGCAACAGCTTCGAAGGCGA...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CAA 90 bp ATTCCAGTGAATCATGATCCACTGGGGATGGGCCTGGATGAAACGGTTCATAACATCACCTGGTTTGTCTaGATGTTCTCATGGTACACC +
Preference number: 5 (lower is better)
Translates to: IPVNHDPLGMGLDETVHNITWFV*MFSWYT
Trigger: GGTGTACCATGAGAACATCAAGACAAACCAGGTGAT...GTTATGAACCGTTTCATCCAGGCCCATCCCCAGTGGATCATGATTCACTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR CAA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAACCCCCGGGGTGTGGCTaGCTCTCTTTCCTCAGTTTC +
Preference number: 5 (lower is better)
Translates to: TVSVRTNIIISWEADNLQPPGCG*LSFLSF
Trigger: GAAACTGAGGAAAGAGAGCAAGCCACACCCCGGGGG...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CAA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATCCCCCGGGGTGTGGCTaGCTCTCTTTCCTCAGTTTC +
Preference number: 5 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNPPGCG*LSFLSF
Trigger: GAAACTGAGGAAAGAGAGCAAGCCACACCCCGGGGG...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTGCTGCTGTAAGAGGTaGTCAAGATTGTGTCGCCTT +
Preference number: 5 (lower is better)
Translates to: GILRGMVKLPVCVTVRYACCCKR*SRLCRL
Trigger: AAGGCGACACAATCTTGACAACCTCTTACAGCAGCA...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCAGCGACACTTTCACATaGAGACACATCTCGCTCTTC +
Preference number: 5 (lower is better)
Translates to: GILRGMVKLPVCVTVRYASDTFT*RHISLF
Trigger: GAAGAGCGAGATGTGTCTCAATGTGAAAGTGTCGCT...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACCATCTTCAGCTGGTTTaGTACTTGGAACTGCTAAGG +
Preference number: 5 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHHLQLV*YLELLR
Trigger: CCTTAGCAGTTCCAAGTACAAAACCAGCTGAAGATG...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCCACAGAGTCAGCTTaGGTAGCGGGTGGGGGATCA +
Preference number: 5 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRSTESA*VAGGGS
Trigger: TGATCCCCCACCCGCTACCAAAGCTGACTCTGTGGA...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTCTGGGGCTCGGGCCTTaGGGCATTTATTTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFLGLGP*GIYLLS
Trigger: GCTCAGCAAATAAATGCCCAAAGGCCCGAGCCCCAG...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAGTGGCACTGGAATCATaGTCTGACTGGGGCTCGGGC +
Preference number: 5 (lower is better)
Translates to: TVSVRTNIIISWEADNLQVALES*SDWGSG
Trigger: GCCCGAGCCCCAGTCAGACAATGATTCCAGTGCCAC...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CAA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGCTTCCCACTCTCTGTTaGGACTCTTGGATGTGCCAC +
Preference number: 5 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRLPTLC*DSWMCH
Trigger: GTGGCACATCCAAGAGTCCAAACAGAGAGTGGGAAG...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCTTCCCACTCTCTGTTaGGACTCTTGGATGTGCCAC +
Preference number: 5 (lower is better)
Translates to: CADLNISTPDTTARGYTLLPTLC*DSWMCH
Trigger: GTGGCACATCCAAGAGTCCAAACAGAGAGTGGGAAG...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATGCCTGGTTGGTCGAGTaGTCGGAAGCCGAACGCCTT +
Preference number: 5 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNAWLVE*SEAERL
Trigger: AAGGCGTTCGGCTTCCGACAACTCGACCAACCAGGC...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGTTTGGCAGATTCCTGTaGCCGTGGCAGTCCAAGAGA +
Preference number: 5 (lower is better)
Translates to: CADLNISTPDTTARGYTLFGRFL*PWQSKR
Trigger: TCTCTTGGACTGCCACGGCAACAGGAATCTGCCAAA...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCGACTACACCTTCATGTaGGGCCCTGACCAACAGACC +
Preference number: 5 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIDYTFM*GPDQQT
Trigger: GGTCTGTTGGTCAGGGCCCAACATGAAGGTGTAGTC...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATGAACGCCCCATTTCTTaGATGGTGGTGATGCCATCA +
Preference number: 5 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNERPIS*MVVMPS
Trigger: TGATGGCATCACCACCATCAAAGAAATGGGGCGTTC...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGGGCTCAGTTGTGCTTaGGGAGCTTCATGCAGTGTG +
Preference number: 5 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVIGLSCA*GASCSV
Trigger: CACACTGCATGAAGCTCCCAAAGCACAACTGAGCCC...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTTGGGTAACCTGGAGTaGGTGAAAGCTGTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: GILRGMVKLPVCVTVRYALGNLE*VKAVSE
Trigger: TTCAGAGACAGCTTTCACCAACTCCAGGTTACCCAA...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACGAGGCACTAAAATTGTaGGAGGCATATTGGTCAGGT +
Preference number: 5 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHEALKL*EAYWSG
Trigger: ACCTGACCAATATGCCTCCAACAATTTTAGTGCCTC...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTAGTTCCCTCTCAGCACTaGCAGCAGCTGCAAGGTGTG +
Preference number: 5 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLVPSQH*QQLQGV
Trigger: CACACCTTGCAGCTGCTGCAAGTGCTGAGAGGGAAC...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATAACACTGGGTCTCTGTaGCAACATGGTCTCCTGAGT +
Preference number: 5 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNNTGSL*QHGLLS
Trigger: ACTCAGGAGACCATGTTGCAACAGAGACCCAGTGTT...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp GGAGGACTGATCTCCTTTACTGATTGGTCTAAATTCAAAAGTGAATTGGTTAAAGCAGGCCTTGGCTTATaGAAGGGCCCCCAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: GGLISFTDWSKFKSELVKAGLGL*KGPQQA
Trigger: TGCCTGCTGGGGGCCCTTCAATAAGCCAAGGCCTGC...TTTAACCAATTCACTTTTGAATTTAGACCAATCAGTAAAGGAGATCAGTCCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CAA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAACGTTCCCTCGCATCCTaGTCCGAGGCAATTTGCCGG +
Preference number: 5 (lower is better)
Translates to: DLNISTPDTTARGYTLQKRSLAS*SEAICR
Trigger: CCGGCAAATTGCCTCGGACAAGGATGCGAGGGAACG...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAACTGAGTTGAGCCTGTaGAAGAGGGCCTGTCTTCCC +
Preference number: 5 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVITELSL*KRACLP
Trigger: GGGAAGACAGGCCCTCTTCAACAGGCTCAACTCAGT...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATACCTTGGCCGCCATCTaGACTCAACCCCTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNTLAAI*TQPLSL
Trigger: GAGGGAGAGGGGTTGAGTCAAGATGGCGGCCAAGGT...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395857.7
CDS GCA 90 bp GGACTTGTAGAACTTCTACATTCCAAATCTATCTGTTCTTGTCTCTaGCGCTGCTCCTCCAGGAGTGCTGACTCATGCATTGCTTTAATG +
Preference number: 5 (lower is better)
Translates to: GLVELLHSKSICSCL*RCSSRSADSCIALM
Trigger: CATTAAAGCAATGCATGAGTCAGCACTCCTGGAGGAGCAGCGGCAGAGACAAGAACAGATAGATTTGGAATGTAGAAGTTCTACAAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS GCA 90 bp CAAGATATGTCCACTTTTGCCTTCATAAATAACATGGCCTTTGGATaGAGCTTCCTCTCTGCCTTTCTCAGGACTGCTGTCTTCAATGGG +
Preference number: 5 (lower is better)
Translates to: QDMSTFAFINNMAFG*SFLSAFLRTAVFNG
Trigger: CCCATTGAAGACAGCAGTCCTGAGAAAGGCAGAGAGGAAGCTGCATCCAAAGGCCATGTTATTTATGAAGGCAAAAGTGGACATATCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
CDS CCA 90 bp TCTTTCTTTGGTATTATCACCTTCAACTTTAGATGCATGGTTTTCTaGCACCCTCACTTCAACGTCCACAGAGTCAGCTTTGGTAGCGGG +
Preference number: 5 (lower is better)
Translates to: SFFGIITFNFRCMVF*HPHFNVHRVSFGSG
Trigger: CCCGCTACCAAAGCTGACTCTGTGGACGTTGAAGTGAGGGTGCCAGAAAACCATGCATCTAAAGTTGAAGGTGATAATACCAAAGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS CCA 90 bp ATGAATGGAACGCCCCATTTCTTTGATGGTGGTGATGCCATCATATaGTTTTCCTTTGGTAATGGCACCTTCAAATGCTCGTATGGGAGG +
Preference number: 5 (lower is better)
Translates to: MNGTPHFFDGGDAII*FSFGNGTFKCSYGR
Trigger: CCTCCCATACGAGCATTTGAAGGTGCCATTACCAAAGGAAAACCATATGATGGCATCACCACCATCAAAGAAATGGGGCGTTCCATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
CDS-3UTR CAA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAATCGCCTTCGAAGCTGTaGCTGCTGCTGTTGCTGCAA +
Preference number: 5 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQSPSKL*LLLLLQ
Trigger: TTGCAGCAACAGCAGCAGCAACAGCTTCGAAGGCGA...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395851.5
CDS-3UTR CAA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGACTAGTTCTCCTTTCTaGAGGCCTGTCAGAACCTGG +
Preference number: 5 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRTSSPF*RPVRTW
Trigger: CCAGGTTCTGACAGGCCTCAAGAAAGGAGAACTAGT...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395851.5
CDS-3UTR CAA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAATCCACAGAGTCAGCTTaGGTAGCGGGTGGGGGATCA +
Preference number: 5 (lower is better)
Translates to: TVSVRTNIIISWEADNLQSTESA*VAGGGS
Trigger: TGATCCCCCACCCGCTACCAAAGCTGACTCTGTGGA...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CAA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCCCTTTGGGCATTTATTaGCTGAGCTACCACCAAATC +
Preference number: 5 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAPLGIY*LSYHQI
Trigger: GATTTGGTGGTAGCTCAGCAAATAAATGCCCAAAGG...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAACTGGGGCTCGGGCCTTaGGGCATTTATTTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: TVSVRTNIIISWEADNLQLGLGP*GIYLLS
Trigger: GCTCAGCAAATAAATGCCCAAAGGCCCGAGCCCCAG...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CAA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAACTGGGGCTCGGGCCTTaGGGCATTTATTTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: DLNISTPDTTARGYTLQKLGLGP*GIYLLS
Trigger: GCTCAGCAAATAAATGCCCAAAGGCCCGAGCCCCAG...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATCTGGGGCTCGGGCCTTaGGGCATTTATTTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNLGLGP*GIYLLS
Trigger: GCTCAGCAAATAAATGCCCAAAGGCCCGAGCCCCAG...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTCACTGGGGTTCCAATaGGTATGTTACATGGGGTGC +
Preference number: 5 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRSLGFQ*VCYMGC
Trigger: GCACCCCATGTAACATACCAATTGGAACCCCAGTGA...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCCTTCCCACTCTCTGTTaGGACTCTTGGATGTGCCAC +
Preference number: 5 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLILPTLC*DSWMCH
Trigger: GTGGCACATCCAAGAGTCCAAACAGAGAGTGGGAAG...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAGAAGCCACTGTGGTTTaGGATGACGGGATGAGAGGG +
Preference number: 5 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQEATVV*DDGMRG
Trigger: CCCTCTCATCCCGTCATCCAAAACCACAGTGGCTTC...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGGAAGCCACTGTGGTTTaGGATGACGGGATGAGAGGG +
Preference number: 5 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKREATVV*DDGMRG
Trigger: CCCTCTCATCCCGTCATCCAAAACCACAGTGGCTTC...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGGGCAAAGTAGCTGATTaGGCAGATTCCTGTTGCCGT +
Preference number: 5 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRGKVAD*ADSCCR
Trigger: ACGGCAACAGGAATCTGCCAAATCAGCTACTTTGCC...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATAGTTATACTTCCTTCTaGTATGGCTCCTGCGGTACC +
Preference number: 5 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNSYTSF*YGSCGT
Trigger: GGTACCGCAGGAGCCATACAAGAAGGAAGTATAACT...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTTCACCAAAGCCTCTGTaGGTATGCCAGTCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFSPKPL*VCQSGA
Trigger: TGCCCCAGACTGGCATACCAACAGAGGCTTTGGTGA...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATTTTCAGTTGTTGCTCTaGGTGTCCCCTGCATTATGG +
Preference number: 5 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNFQLLL*VSPALW
Trigger: CCATAATGCAGGGGACACCAAGAGCAACAACTGAAA...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGGAACGCCCCATTTCTTaGATGGTGGTGATGCCATCA +
Preference number: 5 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRERPIS*MVVMPS
Trigger: TGATGGCATCACCACCATCAAAGAAATGGGGCGTTC...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGATTCCACGGGATAGTTaGCTAGGCCCCGTGATTAAG +
Preference number: 5 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRIPRDS*LGPVIK
Trigger: CTTAATCACGGGGCCTAGCAAACTATCCCGTGGAAT...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTAGGGCTCAGTTGTGCTTaGGGAGCTTCATGCAGTGTG +
Preference number: 5 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLGLSCA*GASCSV
Trigger: CACACTGCATGAAGCTCCCAAAGCACAACTGAGCCC...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATAAAGCTGATACTGACTaGGGTAACCTGGAGTTGGTG +
Preference number: 5 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNKADTD*GNLELV
Trigger: CACCAACTCCAGGTTACCCAAGTCAGTATCAGCTTT...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAACAGCTGCAAGGTGTGTaGGGTGTCCTGGAGACATGG +
Preference number: 5 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIEQLQGV*GVLETW
Trigger: CCATGTCTCCAGGACACCCAACACACCTTGCAGCTG...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAAGTTCCCTCTCAGCACTaGCAGCAGCTGCAAGGTGTG +
Preference number: 5 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIEVPSQH*QQLQGV
Trigger: CACACCTTGCAGCTGCTGCAAGTGCTGAGAGGGAAC...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGGGTTCCATTGGTTCCTaGGAAAACACTGGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRGSIGS*ENTGSL
Trigger: CAGAGACCCAGTGTTTTCCAAGGAACCAATGGAACC...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACTTACTCTCTTTTGTTTaGGACACATCCATCTGGGGT +
Preference number: 5 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHLLSFV*DTSIWG
Trigger: ACCCCAGATGGATGTGTCCAAAACAAAAGAGAGTAA...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGCTTGTCCGAGGCAATTaGCCGGGTGATGATCACGTC +
Preference number: 5 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRLVRGN*PGDDHV
Trigger: GACGTGATCATCACCCGGCAAATTGCCTCGGACAAG...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACAGGATCATTTTCCGCTaGATTTGCCTTAACAACCTC +
Preference number: 5 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHRIIFR*ICLNNL
Trigger: GAGGTTGTTAAGGCAAATCAAGCGGAAAATGATCCT...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTTCCTGCTGTTTGACTaGCTGATCAGCTTTGGTTTG +
Preference number: 5 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAFLLFD*LISFGL
Trigger: CAAACCAAAGCTGATCAGCAAGTCAAACAGCAGGAA...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTACTGAGTTGAGCCTGTaGAAGAGGGCCTGTCTTCCC +
Preference number: 5 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFTELSL*KRACLP
Trigger: GGGAAGACAGGCCCTCTTCAACAGGCTCAACTCAGT...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCCCAGATCCTGTTCTGTaGGTGAGGAGCTGCTTGGTT +
Preference number: 5 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIPDPVL*VRSCLV
Trigger: AACCAAGCAGCTCCTCACCAACAGAACAGGATCTGG...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGCCTGTTCCCCTCACTTaGTGCAGTTCAGTCATCACT +
Preference number: 5 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRPVPLT*CSSVIT
Trigger: AGTGATGACTGAACTGCACAAAGTGAGGGGAACAGG...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGTTGGTCTTGCTATCTaGGGTGGCAGAGGTGGAAGA +
Preference number: 5 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVIVGLAI*GGRGGR
Trigger: TCTTCCACCTCTGCCACCCAAGATAGCAAGACCAAC...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATATCACTGGGGTTCCAATaGGTATGTTACATGGGGTGC +
Preference number: 5 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVISLGFQ*VCYMGC
Trigger: GCACCCCATGTAACATACCAATTGGAACCCCAGTGA...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATCTGAAATTTTGCTGGTaGGAGTTCCCCGAGTTATAC +
Preference number: 5 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNLKFCW*EFPELY
Trigger: GTATAACTCGGGGAACTCCAACCAGCAAAATTTCAG...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CTCCAGGTGATGGTAAATAAAGTAATACGCACATGCATTATGATGAGGATGGAGCTCTCCACTGAAATTTaGCTGGTTGGAGTTCCCCGA +
Preference number: 5 (lower is better)
Translates to: LQVMVNKVIRTCIMMRMELSTEI*LVGVPR
Trigger: TCGGGGAACTCCAACCAGCAAAATTTCAGTGGAGAG...CTCCATCCTCATCATAATGCATGTGCGTATTACTTTATTTACCATCACCTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CAA 90 bp CTCCAGGTGATGGTAAATAAAGTAATACGCACATGCATTATGATGAGGATGGAGCAAAGCTTTCAGTTGTaGCTCTTGGTGTCCCCTGCA +
Preference number: 5 (lower is better)
Translates to: LQVMVNKVIRTCIMMRMEQSFQL*LLVSPA
Trigger: TGCAGGGGACACCAAGAGCAACAACTGAAAGCTTTG...CTCCATCCTCATCATAATGCATGTGCGTATTACTTTATTTACCATCACCTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CAA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCCAAAGCTTTCAGTTGTaGCTCTTGGTGTCCCCTGCA +
Preference number: 5 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIQSFQL*LLVSPA
Trigger: TGCAGGGGACACCAAGAGCAACAACTGAAAGCTTTG...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGAATCCCAGGGCTCAGTaGTGCTTTGGGAGCTTCATG +
Preference number: 5 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRNPRAQ*CFGSFM
Trigger: CATGAAGCTCCCAAAGCACAACTGAGCCCTGGGATT...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGTCTGGACATGGTGTTTaGATAACTCACAGGGGTCCT +
Preference number: 5 (lower is better)
Translates to: CADLNISTPDTTARGYTLSGHGV*ITHRGP
Trigger: AGGACCCCTGTGAGTTATCAAAACACCATGTCCAGA...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCATTGTTGGAGGCATATaGGTCAGGTCAATGATTCCT +
Preference number: 5 (lower is better)
Translates to: GILRGMVKLPVCVTVRYAIVGGI*VRSMIP
Trigger: AGGAATCATTGACCTGACCAATATGCCTCCAACAAT...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATGACATGGAAGCAGAGTaGTACGGCCTGGGAGGGAAA +
Preference number: 5 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNDMEAE*YGLGGK
Trigger: TTTCCCTCCCAGGCCGTACAACTCTGCTTCCATGTC...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCAGGATCATTTTCCGCTaGATTTGCCTTAACAACCTC +
Preference number: 5 (lower is better)
Translates to: GILRGMVKLPVCVTVRYARIIFR*ICLNNL
Trigger: GAGGTTGTTAAGGCAAATCAAGCGGAAAATGATCCT...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAACTGTCCTCGCTGGGCTaGACAGCTTCAACTGGTGAA +
Preference number: 5 (lower is better)
Translates to: TVSVRTNIIISWEADNLQLSSLG*TASTGE
Trigger: TTCACCAGTTGAAGCTGTCAAGCCCAGCGAGGACAG...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS TCA 90 bp GGGATACTTTCCCTCTGGGTAGGGGTCAGTGTCGATTTCCTTTCATaGTTGGTAGACTTGTTAGAAGAAACATCAGAAGTTCTGTTCATC +
Preference number: 5 (lower is better)
Translates to: GILSLWVGVSVDFLS*LVDLLEETSEVLFI
Trigger: GATGAACAGAACTTCTGATGTTTCTTCTAACAAGTCTACCAATCATGAAAGGAAATCGACACTGACCCCTACCCAGAGGGAAAGTATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395857.7
CDS GCA 90 bp TCTATCCAAGTCTCTTTCTTTGGTATTATCACCTTCAACTTTAGATaGATGGTTTTCTGGCACCCTCACTTCAACGTCCACAGAGTCAGC +
Preference number: 5 (lower is better)
Translates to: SIQVSFFGIITFNFR*MVFWHPHFNVHRVS
Trigger: GCTGACTCTGTGGACGTTGAAGTGAGGGTGCCAGAAAACCATGCATCTAAAGTTGAAGGTGATAATACCAAAGAAAGAGACTTGGATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS CCA 90 bp TCCAAGTCTCTTTCTTTGGTATTATCACCTTCAACTTTAGATGCATaGTTTTCTGGCACCCTCACTTCAACGTCCACAGAGTCAGCTTTG +
Preference number: 5 (lower is better)
Translates to: SKSLSLVLSPSTLDA*FSGTLTSTSTESAL
Trigger: CAAAGCTGACTCTGTGGACGTTGAAGTGAGGGTGCCAGAAAACCATGCATCTAAAGTTGAAGGTGATAATACCAAAGAAAGAGACTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS CCA 90 bp CTGAAGGACTTCCCACTCTCTGTTTGGACTCTTGGATGTGCCACATaGACTTGTAGAACTTCTACATTCCAAATCTATCTGTTCTTGTCT +
Preference number: 5 (lower is better)
Translates to: LKDFPLSVWTLGCAT*TCRTSTFQIYLFLS
Trigger: AGACAAGAACAGATAGATTTGGAATGTAGAAGTTCTACAAGTCCATGTGGCACATCCAAGAGTCCAAACAGAGAGTGGGAAGTCCTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS CCA 90 bp CTACCTACCTTCCCACTCTCTGTTTGGACTCTTGGATGTGCCACATaGACTTGTAGAACTTCTACATTCCAAATCTATCTGTTCTTGTCT +
Preference number: 5 (lower is better)
Translates to: LPTFPLSVWTLGCAT*TCRTSTFQIYLFLS
Trigger: AGACAAGAACAGATAGATTTGGAATGTAGAAGTTCTACAAGTCCATGTGGCACATCCAAGAGTCCAAACAGAGAGTGGGAAGGTAGGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CAA 90 bp ATCTCCTTTTCATGGTCAGTCCAAACATTCATAAACTGCCTATCTTTATACACTTCGCCTTCGAAGCTGTaGCTGCTGCTGTTGCTGCAA +
Preference number: 5 (lower is better)
Translates to: ISFSWSVQTFINCLSLYTSPSKL*LLLLLQ
Trigger: TTGCAGCAACAGCAGCAGCAACAGCTTCGAAGGCGA...AGTGTATAAAGATAGGCAGTTTATGAATGTTTGGACTGACCATGAAAAGGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR CAA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGGTGGCAGTTCAACTTTaGGGCCAAGACCTTCAAAAA +
Preference number: 5 (lower is better)
Translates to: CADLNISTPDTTARGYTLVAVQL*GQDLQK
Trigger: TTTTTGAAGGTCTTGGCCCAAAAGTTGAACTGCCAC...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGATCACCTGGTTTGTCTaGATGTTCTCATGGTACACC +
Preference number: 5 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRITWFV*MFSWYT
Trigger: GGTGTACCATGAGAACATCAAGACAAACCAGGTGAT...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTCAGCTGGTTTTGTACTaGGAACTGCTAAGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFQLVLY*ELLRRE
Trigger: CTCCCTCCTTAGCAGTTCCAAGTACAAAACCAGCTG...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGCATCTTCAGCTGGTTTaGTACTTGGAACTGCTAAGG +
Preference number: 5 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRHLQLV*YLELLR
Trigger: CCTTAGCAGTTCCAAGTACAAAACCAGCTGAAGATG...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAATCACTGGGGTTCCAATaGGTATGTTACATGGGGTGC +
Preference number: 5 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQSLGFQ*VCYMGC
Trigger: GCACCCCATGTAACATACCAATTGGAACCCCAGTGA...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAACTTCCCACTCTCTGTTaGGACTCTTGGATGTGCCAC +
Preference number: 5 (lower is better)
Translates to: TVSVRTNIIISWEADNLQLPTLC*DSWMCH
Trigger: GTGGCACATCCAAGAGTCCAAACAGAGAGTGGGAAG...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CAA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAACGGCTTGGGTGTTTCTaGAGTGTAGGAAGCCTGATT +
Preference number: 5 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQRLGCF*SVGSLI
Trigger: AATCAGGCTTCCTACACTCAAGAAACACCCAAGCCG...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAATTTGGCAGATTCCTGTaGCCGTGGCAGTCCAAGAGA +
Preference number: 5 (lower is better)
Translates to: DLNISTPDTTARGYTLQKFGRFL*PWQSKR
Trigger: TCTCTTGGACTGCCACGGCAACAGGAATCTGCCAAA...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTGGCAAAGTAGCTGATTaGGCAGATTCCTGTTGCCGT +
Preference number: 5 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFGKVAD*ADSCCR
Trigger: ACGGCAACAGGAATCTGCCAAATCAGCTACTTTGCC...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAGGCAAAGTAGCTGATTaGGCAGATTCCTGTTGCCGT +
Preference number: 5 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQGKVAD*ADSCCR
Trigger: ACGGCAACAGGAATCTGCCAAATCAGCTACTTTGCC...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTCTCTCCACTGAAATTTaGCTGGTTGGAGTTCCCCGA +
Preference number: 5 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFLSTEI*LVGVPR
Trigger: TCGGGGAACTCCAACCAGCAAAATTTCAGTGGAGAG...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGCAAAGCTTTCAGTTGTaGCTCTTGGTGTCCCCTGCA +
Preference number: 5 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRQSFQL*LLVSPA
Trigger: TGCAGGGGACACCAAGAGCAACAACTGAAAGCTTTG...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATCCCGTGATTAAGGATTaGACATTGTGTTTGATGGCA +
Preference number: 5 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNPVIKD*TLCLMA
Trigger: TGCCATCAAACACAATGTCAAATCCTTAATCACGGG...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGGTCTTGTGTTCTCCATaGCGTAAAGCTGATACTGAC +
Preference number: 5 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRVLCSP*RKADTD
Trigger: GTCAGTATCAGCTTTACGCAATGGAGAACACAAGAC...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGGAGGCACTAAAATTGTaGGAGGCATATTGGTCAGGT +
Preference number: 5 (lower is better)
Translates to: CADLNISTPDTTARGYTLEALKL*EAYWSG
Trigger: ACCTGACCAATATGCCTCCAACAATTTTAGTGCCTC...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAACACTGGGTCTCTGTaGCAACATGGTCTCCTGAGT +
Preference number: 5 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQNTGSL*QHGLLS
Trigger: ACTCAGGAGACCATGTTGCAACAGAGACCCAGTGTT...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp ATAAACATGCAGTGGAAAACTGGCTGTCAGAATACTTTTATGAAGAGTATTAGGCTTGTCCGAGGCAATTaGCCGGGTGATGATCACGTC +
Preference number: 5 (lower is better)
Translates to: INMQWKTGCQNTFMKSIRLVRGN*PGDDHV
Trigger: GACGTGATCATCACCCGGCAAATTGCCTCGGACAAG...CCTAATACTCTTCATAAAAGTATTCTGACAGCCAGTTTTCCACTGCATGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CAA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGTTTCTGGAGAGACCCTaGAACCTGGTCTTTGATGAT +
Preference number: 5 (lower is better)
Translates to: CADLNISTPDTTARGYTLFLERP*NLVFDD
Trigger: ATCATCAAAGACCAGGTTCAAGGGTCTCTCCAGAAA...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTTTCTGGAGAGACCCTaGAACCTGGTCTTTGATGAT +
Preference number: 5 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRFLERP*NLVFDD
Trigger: ATCATCAAAGACCAGGTTCAAGGGTCTCTCCAGAAA...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCGATGTATTTTCAAGCTaGGTGAAGAATGAAGGCAAG +
Preference number: 5 (lower is better)
Translates to: GILRGMVKLPVCVTVRYADVFSS*VKNEGK
Trigger: CTTGCCTTCATTCTTCACCAAGCTTGAAAATACATC...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAACCAGATCCTGTTCTGTaGGTGAGGAGCTGCTTGGTT +
Preference number: 5 (lower is better)
Translates to: DLNISTPDTTARGYTLQKPDPVL*VRSCLV
Trigger: AACCAAGCAGCTCCTCACCAACAGAACAGGATCTGG...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTCCTGTTCCCCTCACTTaGTGCAGTTCAGTCATCACT +
Preference number: 5 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFPVPLT*CSSVIT
Trigger: AGTGATGACTGAACTGCACAAAGTGAGGGGAACAGG...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTACCTGTTCCCCTCACTTaGTGCAGTTCAGTCATCACT +
Preference number: 5 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLPVPLT*CSSVIT
Trigger: AGTGATGACTGAACTGCACAAAGTGAGGGGAACAGG...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATAAAACAAAAGCTTTGTaGGGCTGCATCAAATGCAGG +
Preference number: 5 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNKTKAL*GCIKCR
Trigger: CCTGCATTTGATGCAGCCCAACAAAGCTTTTGTTTT...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CTTGCTATCTTGGGTGGCAGAGGTGGAAGAAAATCCATGTATAAGTGGACCCACAAAGAATATCATGTTTaGGTTTGCAGTGAACCACAG +
Preference number: 5 (lower is better)
Translates to: LAILGGRGGRKSMYKWTHKEYHV*VCSEPQ
Trigger: CTGTGGTTCACTGCAAACCAAAACATGATATTCTTT...GTGGGTCCACTTATACATGGATTTTCTTCCACCTCTGCCACCCAAGATAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS TCA 90 bp GGGATACTTTCCCTCTGGGTAGGGGTCAGTGTCGATTTCCTTTCATaGTTGGTAGACTTGTTAGAAGAAATTGTAACATCAGAAGTTCTG +
Preference number: 5 (lower is better)
Translates to: GILSLWVGVSVDFLS*LVDLLEEIVTSEVL
Trigger: CAGAACTTCTGATGTTACAATTTCTTCTAACAAGTCTACCAATCATGAAAGGAAATCGACACTGACCCCTACCCAGAGGGAAAGTATCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000458113.6
CDS GCA 90 bp TCAGAGTCACCTCCACCAGAGGAGTTCAACTTACGAAAAATCTCCTaGTTCTTTGATTTAACCATGGGTGATGTATTTTCAAGCTTGGTG +
Preference number: 5 (lower is better)
Translates to: SESPPPEEFNLRKIS*FFDLTMGDVFSSLV
Trigger: CACCAAGCTTGAAAATACATCACCCATGGTTAAATCAAAGAAGCAGGAGATTTTTCGTAAGTTGAACTCCTCTGGTGGAGGTGACTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000464381.5
ENST00000470782.5
ENST00000579606.1
ENST00000583234.1
CDS-3UTR CAA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGTGGCAGTTCAACTTTaGGGCCAAGACCTTCAAAAA +
Preference number: 5 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVIVAVQL*GQDLQK
Trigger: TTTTTGAAGGTCTTGGCCCAAAAGTTGAACTGCCAC...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATATTCTCATGGTACACCTaGGTATCTGATGGCTGGTTA +
Preference number: 5 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVIFSWYT*VSDGWL
Trigger: TAACCAGCCATCAGATACCAAGGTGTACCATGAGAA...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp TTCCTCATCACCTGGTTTGTCTTGATGTTCTCATGGTACACCTTGGTATCTGATACGCTGGCAGATTTTTaGTTCCCTTTGTTTTCTTGC +
Preference number: 5 (lower is better)
Translates to: FLITWFVLMFSWYTLVSDTLADF*FPLFSC
Trigger: GCAAGAAAACAAAGGGAACAAAAAATCTGCCAGCGT...ATCAGATACCAAGGTGTACCATGAGAACATCAAGACAAACCAGGTGATGAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR CAA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATGAACTTGACTCGTCTTaGTTCTGCATCAAACATCAT +
Preference number: 5 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNELDSS*FCIKHH
Trigger: ATGATGTTTGATGCAGAACAAAGACGAGTCAAGTTC...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATGGATGCTGGATAAACTaGTCCTTAAAGATCTCCTTT +
Preference number: 5 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNGCWIN*SLKISF
Trigger: AAAGGAGATCTTTAAGGACAAGTTTATCCAGCATCC...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp TTCCTCATCACCTGGTTTGTCTTGATGTTCTCATGGTACACCTTGGTATCTGATTTCTACTTTTTCTTCTaGCGAGGGTCGAGCAATTTG +
Preference number: 5 (lower is better)
Translates to: FLITWFVLMFSWYTLVSDFYFFF*RGSSNL
Trigger: CAAATTGCTCGACCCTCGCAAGAAGAAAAAGTAGAA...ATCAGATACCAAGGTGTACCATGAGAACATCAAGACAAACCAGGTGATGAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR CAA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTTGCTGCTGTAAGAGGTaGTCAAGATTGTGTCGCCTT +
Preference number: 5 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFCCCKR*SRLCRL
Trigger: AAGGCGACACAATCTTGACAACCTCTTACAGCAGCA...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAACAGCTGGTTTTGTACTaGGAACTGCTAAGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: TVSVRTNIIISWEADNLQQLVLY*ELLRRE
Trigger: CTCCCTCCTTAGCAGTTCCAAGTACAAAACCAGCTG...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CAA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCCAAGTCTCTTTCTTaGGTATTATCACCTTCAACT +
Preference number: 5 (lower is better)
Translates to: GILRGMVKLPVCVTVRYASKSLS*VLSPST
Trigger: AGTTGAAGGTGATAATACCAAAGAAAGAGACTTGGA...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCCCTTTGGGCATTTATTaGCTGAGCTACCACCAAATC +
Preference number: 5 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIPLGIY*LSYHQI
Trigger: GATTTGGTGGTAGCTCAGCAAATAAATGCCCAAAGG...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCGCAGATCCAGTGGATTaGGTTTTAACGGAGATGAGA +
Preference number: 5 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIADPVD*VLTEMR
Trigger: TCTCATCTCCGTTAAAACCAAATCCACTGGATCTGC...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAATCACTGGGGTTCCAATaGGTATGTTACATGGGGTGC +
Preference number: 5 (lower is better)
Translates to: TVSVRTNIIISWEADNLQSLGFQ*VCYMGC
Trigger: GCACCCCATGTAACATACCAATTGGAACCCCAGTGA...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CAA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAACAAATCTATCTGTTCTaGTCTCTGCCGCTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: TVSVRTNIIISWEADNLQQIYLF*SLPLLL
Trigger: GAGGAGCAGCGGCAGAGACAAGAACAGATAGATTTG...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CAA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAACAAATCTATCTGTTCTaGTCTCTGCCGCTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: DLNISTPDTTARGYTLQKQIYLF*SLPLLL
Trigger: GAGGAGCAGCGGCAGAGACAAGAACAGATAGATTTG...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAATCTCTGTTTGGACTCTaGGATGTGCCACATGGACTT +
Preference number: 5 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQSLFGL*DVPHGL
Trigger: AAGTCCATGTGGCACATCCAAGAGTCCAAACAGAGA...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTTCTCTGTTTGGACTCTaGGATGTGCCACATGGACTT +
Preference number: 5 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFSLFGL*DVPHGL
Trigger: AAGTCCATGTGGCACATCCAAGAGTCCAAACAGAGA...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCGAGATTAGTTATCACTaGATGTGGAGCAGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIEISYH*MWSRLK
Trigger: CTTCAGCCTGCTCCACATCAAGTGATAACTAATCTC...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGAGTTATACTTCCTTCTaGTATGGCTCCTGCGGTACC +
Preference number: 5 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRSYTSF*YGSCGT
Trigger: GGTACCGCAGGAGCCATACAAGAAGGAAGTATAACT...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTAAGTTATACTTCCTTCTaGTATGGCTCCTGCGGTACC +
Preference number: 5 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLSYTSF*YGSCGT
Trigger: GGTACCGCAGGAGCCATACAAGAAGGAAGTATAACT...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTTTTCAGTTGTTGCTCTaGGTGTCCCCTGCATTATGG +
Preference number: 5 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFFQLLL*VSPALW
Trigger: CCATAATGCAGGGGACACCAAGAGCAACAACTGAAA...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTGTTGTCAAACTTTATaGGTGTGCCCTGGGAAATGG +
Preference number: 5 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLICCQTL*VCPGKW
Trigger: CCATTTCCCAGGGCACACCAATAAAGTTTGACAACA...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATATTCCACGGGATAGTTaGCTAGGCCCCGTGATTAAG +
Preference number: 5 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNIPRDS*LGPVIK
Trigger: CTTAATCACGGGGCCTAGCAAACTATCCCGTGGAAT...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTATCTGGACATGGTGTTTaGATAACTCACAGGGGTCCT +
Preference number: 5 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLSGHGV*ITHRGP
Trigger: AGGACCCCTGTGAGTTATCAAAACACCATGTCCAGA...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAATTGGGTAACCTGGAGTaGGTGAAAGCTGTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQLGNLE*VKAVSE
Trigger: TTCAGAGACAGCTTTCACCAACTCCAGGTTACCCAA...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTAAAGCTGATACTGACTaGGGTAACCTGGAGTTGGTG +
Preference number: 5 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFKADTD*GNLELV
Trigger: CACCAACTCCAGGTTACCCAAGTCAGTATCAGCTTT...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp GGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTTAAGATTGTCTGTCTaGTGTTCTCCATTGCGTAAA +
Preference number: 5 (lower is better)
Translates to: GILRGMVKLPVCVTVRYALRLSV*CSPLRK
Trigger: TTTACGCAATGGAGAACACAAGACAGACAATCTTAA...GGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAAAACACTGGGTCTCTGTaGCAACATGGTCTCCTGAGT +
Preference number: 5 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIENTGSL*QHGLLS
Trigger: ACTCAGGAGACCATGTTGCAACAGAGACCCAGTGTT...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTTCCATTGGTTCCTaGGAAAACACTGGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: DLNISTPDTTARGYTLQKGSIGS*ENTGSL
Trigger: CAGAGACCCAGTGTTTTCCAAGGAACCAATGGAACC...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGATTACACTGGTTCCATaGGTTCCTTGGAAAACACTG +
Preference number: 5 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRITLVP*VPWKTL
Trigger: CAGTGTTTTCCAAGGAACCAATGGAACCAGTGTAAT...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGTTACTCTCTTTTGTTTaGGACACATCCATCTGGGGT +
Preference number: 5 (lower is better)
Translates to: CADLNISTPDTTARGYTLLLSFV*DTSIWG
Trigger: ACCCCAGATGGATGTGTCCAAAACAAAAGAGAGTAA...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp CTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTATGCCTCAAATAGTCTGCGAGGAAACTaGATTTCTAGCAAAATCTTG +
Preference number: 5 (lower is better)
Translates to: LRGMVKLPVCVTVRYASNSLRGN*ISSKIL
Trigger: CAAGATTTTGCTAGAAATCAAGTTTCCTCGCAGACT...ATTTGAGGCATACCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATACTCATGGTCTCGTTGTaGGAAACACTAGGAGTTTTC +
Preference number: 5 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVILMVSL*ETLGVF
Trigger: GAAAACTCCTAGTGTTTCCAACAACGAGACCATGAG...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS TCA 90 bp CAAAGGCTAACCTGGGACTTACCTAAACAGAAACTTGTTAACTCATaGCTTCATTCAGGAGAAGGAGCAAAAGCTGCCAATTTCTATCAG +
Preference number: 5 (lower is better)
Translates to: QRLTWDLPKQKLVNS*LHSGEGAKAANFYQ
Trigger: CTGATAGAAATTGGCAGCTTTTGCTCCTTCTCCTGAATGAAGTCATGAGTTAACAAGTTTCTGTTTAGGTAAGTCCCAGGTTAGCCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583234.1
CDS GCA 90 bp GTCATAGTACCAAATGCCAAGACAGTGGACATTCTAAGAATAATATaGAGGGGGAAGAAAGCTCATTTACACTTTCCTGGGAATAAAGGC +
Preference number: 5 (lower is better)
Translates to: VIVPNAKTVDILRII*RGKKAHLHFPGNKG
Trigger: GCCTTTATTCCCAGGAAAGTGTAAATGAGCTTTCTTCCCCCTGCATATTATTCTTAGAATGTCCACTGTCTTGGCATTTGGTACTATGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472189.1
CDS-3UTR CAA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTGTGGCAGTTCAACTTTaGGGCCAAGACCTTCAAAAA +
Preference number: 5 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFVAVQL*GQDLQK
Trigger: TTTTTGAAGGTCTTGGCCCAAAAGTTGAACTGCCAC...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTTTCTCATGGTACACCTaGGTATCTGATGGCTGGTTA +
Preference number: 5 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFFSWYT*VSDGWL
Trigger: TAACCAGCCATCAGATACCAAGGTGTACCATGAGAA...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTATCACCTGGTTTGTCTaGATGTTCTCATGGTACACC +
Preference number: 5 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFITWFV*MFSWYT
Trigger: GGTGTACCATGAGAACATCAAGACAAACCAGGTGAT...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAATCACCTGGTTTGTCTaGATGTTCTCATGGTACACC +
Preference number: 5 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQITWFV*MFSWYT
Trigger: GGTGTACCATGAGAACATCAAGACAAACCAGGTGAT...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCACGCTGGCAGATTTTTaGTTCCCTTTGTTTTCTTGC +
Preference number: 5 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLITLADF*FPLFSC
Trigger: GCAAGAAAACAAAGGGAACAAAAAATCTGCCAGCGT...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAATGCTGCTGTAAGAGGTaGTCAAGATTGTGTCGCCTT +
Preference number: 5 (lower is better)
Translates to: TVSVRTNIIISWEADNLQCCCKR*SRLCRL
Trigger: AAGGCGACACAATCTTGACAACCTCTTACAGCAGCA...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CAA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAAGCGACACTTTCACATaGAGACACATCTCGCTCTTC +
Preference number: 5 (lower is better)
Translates to: TVSVRTNIIISWEADNLQSDTFT*RHISLF
Trigger: GAAGAGCGAGATGTGTCTCAATGTGAAAGTGTCGCT...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CAA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAACCTTTGGGCATTTATTaGCTGAGCTACCACCAAATC +
Preference number: 5 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQPLGIY*LSYHQI
Trigger: GATTTGGTGGTAGCTCAGCAAATAAATGCCCAAAGG...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTGCAGATCCAGTGGATTaGGTTTTAACGGAGATGAGA +
Preference number: 5 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFADPVD*VLTEMR
Trigger: TCTCATCTCCGTTAAAACCAAATCCACTGGATCTGC...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp GGAGGACTGATCTCCTTTACTGATTGGTCTAAATTCAAAAGTGAATTGGTTAAACAAATCTATCTGTTCTaGTCTCTGCCGCTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: GGLISFTDWSKFKSELVKQIYLF*SLPLLL
Trigger: GAGGAGCAGCGGCAGAGACAAGAACAGATAGATTTG...TTTAACCAATTCACTTTTGAATTTAGACCAATCAGTAAAGGAGATCAGTCCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CAA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATTCTCTGTTTGGACTCTaGGATGTGCCACATGGACTT +
Preference number: 5 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNSLFGL*DVPHGL
Trigger: AAGTCCATGTGGCACATCCAAGAGTCCAAACAGAGA...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAATCTCTGTTTGGACTCTaGGATGTGCCACATGGACTT +
Preference number: 5 (lower is better)
Translates to: TVSVRTNIIISWEADNLQSLFGL*DVPHGL
Trigger: AAGTCCATGTGGCACATCCAAGAGTCCAAACAGAGA...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CAA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAGAGATTAGTTATCACTaGATGTGGAGCAGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQEISYH*MWSRLK
Trigger: CTTCAGCCTGCTCCACATCAAGTGATAACTAATCTC...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAACTGAAATTTTGCTGGTaGGAGTTCCCCGAGTTATAC +
Preference number: 5 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQLKFCW*EFPELY
Trigger: GTATAACTCGGGGAACTCCAACCAGCAAAATTTCAG...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTACTGAAATTTTGCTGGTaGGAGTTCCCCGAGTTATAC +
Preference number: 5 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLLKFCW*EFPELY
Trigger: GTATAACTCGGGGAACTCCAACCAGCAAAATTTCAG...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAACAGGAGACTCCCTCATaGACATCCCTTGCTTTATAT +
Preference number: 5 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQQETPS*TSLALY
Trigger: ATATAAAGCAAGGGATGTCAATGAGGGAGTCTCCTG...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTACAGGAGACTCCCTCATaGACATCCCTTGCTTTATAT +
Preference number: 5 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLQETPS*TSLALY
Trigger: ATATAAAGCAAGGGATGTCAATGAGGGAGTCTCCTG...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAATGTTGTCAAACTTTATaGGTGTGCCCTGGGAAATGG +
Preference number: 5 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQCCQTL*VCPGKW
Trigger: CCATTTCCCAGGGCACACCAATAAAGTTTGACAACA...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp ATAAACATGCAGTGGAAAACTGGCTGTCAGAATACTTTTATGAAGAGTATTAGGATTCCACGGGATAGTTaGCTAGGCCCCGTGATTAAG +
Preference number: 5 (lower is better)
Translates to: INMQWKTGCQNTFMKSIRIPRDS*LGPVIK
Trigger: CTTAATCACGGGGCCTAGCAAACTATCCCGTGGAAT...CCTAATACTCTTCATAAAAGTATTCTGACAGCCAGTTTTCCACTGCATGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CAA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATAAAGCTGATACTGACTaGGGTAACCTGGAGTTGGTG +
Preference number: 5 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNKADTD*GNLELV
Trigger: CACCAACTCCAGGTTACCCAAGTCAGTATCAGCTTT...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTGTCTTGTGTTCTCCATaGCGTAAAGCTGATACTGAC +
Preference number: 5 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFVLCSP*RKADTD
Trigger: GTCAGTATCAGCTTTACGCAATGGAGAACACAAGAC...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAGTCTTGTGTTCTCCATaGCGTAAAGCTGATACTGAC +
Preference number: 5 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQVLCSP*RKADTD
Trigger: GTCAGTATCAGCTTTACGCAATGGAGAACACAAGAC...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGGAGGCACTAAAATTGTaGGAGGCATATTGGTCAGGT +
Preference number: 5 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKREALKL*EAYWSG
Trigger: ACCTGACCAATATGCCTCCAACAATTTTAGTGCCTC...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp GGAGGACTGATCTCCTTTACTGATTGGTCTAAATTCAAAAGTGAATTGGTTAAAGGTTCCATTGGTTCCTaGGAAAACACTGGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: GGLISFTDWSKFKSELVKGSIGS*ENTGSL
Trigger: CAGAGACCCAGTGTTTTCCAAGGAACCAATGGAACC...TTTAACCAATTCACTTTTGAATTTAGACCAATCAGTAAAGGAGATCAGTCCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CAA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAACCTCATATCTGGATTTaGGAGGAGGCCCTTTATCTT +
Preference number: 5 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQPHIWI*EEALYL
Trigger: AAGATAAAGGGCCTCCTCCAAAATCCAGATATGAGG...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTATTTCTGGAGAGACCCTaGAACCTGGTCTTTGATGAT +
Preference number: 5 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLFLERP*NLVFDD
Trigger: ATCATCAAAGACCAGGTTCAAGGGTCTCTCCAGAAA...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCAAAACAAAAGCTTTGTaGGGCTGCATCAAATGCAGG +
Preference number: 5 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIKTKAL*GCIKCR
Trigger: CCTGCATTTGATGCAGCCCAACAAAGCTTTTGTTTT...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGTTCAAAACAAAAGCTTaGTTGGGCTGCATCAAATGC +
Preference number: 5 (lower is better)
Translates to: CADLNISTPDTTARGYTLFKTKA*LGCIKC
Trigger: GCATTTGATGCAGCCCAACAAAGCTTTTGTTTTGAA...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp GGAAAAAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTTTAACAGTAAACTCTaGTCCCAAGGGAGCAAAGTG +
Preference number: 5 (lower is better)
Translates to: GKRTVFTMSFSGCSIKLIFNSKL*SQGSKV
Trigger: CACTTTGCTCCCTTGGGACAAGAGTTTACTGTTAAA...GATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTTTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS TCA 90 bp CCATTGAGACAGATAAATATGAGAGGTATTATTCGGAAGCACCACTaGAGTGTCCCCAAACCACTACCAAACTACACATTCTTCTTAACT +
Preference number: 5 (lower is better)
Translates to: PLRQINMRGIIRKHH*SVPKPLPNYTFFLT
Trigger: AGTTAAGAAGAATGTGTAGTTTGGTAGTGGTTTGGGGACACTTCAGTGGTGCTTCCGAATAATACCTCTCATATTTATCTGTCTCAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472189.1
CDS GCA 90 bp GGTGATGCCATCATATGGTTTTCCTTTGGTAATGGCACCTTCAAATaGTCGTATGGGAGGACTTTCCCTTTTAATTTGTTTGGGATATTT +
Preference number: 5 (lower is better)
Translates to: GDAIIWFSFGNGTFK*SYGRTFPFNLFGIF
Trigger: AAATATCCCAAACAAATTAAAAGGGAAAGTCCTCCCATACGAGCATTTGAAGGTGCCATTACCAAAGGAAAACCATATGATGGCATCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
CDS-3UTR CAA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAGTGGCAGTTCAACTTTaGGGCCAAGACCTTCAAAAA +
Preference number: 5 (lower is better)
Translates to: TVSVRTNIIISWEADNLQVAVQL*GQDLQK
Trigger: TTTTTGAAGGTCTTGGCCCAAAAGTTGAACTGCCAC...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CAA 90 bp ATAAGCCCATTCATGTTAATGAACTTGACTCGTCTTTGTTCTGCATCAAACATCGTGGCAGTTCAACTTTaGGGCCAAGACCTTCAAAAA +
Preference number: 5 (lower is better)
Translates to: ISPFMLMNLTRLCSASNIVAVQL*GQDLQK
Trigger: TTTTTGAAGGTCTTGGCCCAAAAGTTGAACTGCCAC...GATGTTTGATGCAGAACAAAGACGAGTCAAGTTCATTAACATGAATGGGCTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR CAA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAATTCTCATGGTACACCTaGGTATCTGATGGCTGGTTA +
Preference number: 5 (lower is better)
Translates to: TVSVRTNIIISWEADNLQFSWYT*VSDGWL
Trigger: TAACCAGCCATCAGATACCAAGGTGTACCATGAGAA...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CAA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAATTCTCATGGTACACCTaGGTATCTGATGGCTGGTTA +
Preference number: 5 (lower is better)
Translates to: DLNISTPDTTARGYTLQKFSWYT*VSDGWL
Trigger: TAACCAGCCATCAGATACCAAGGTGTACCATGAGAA...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAATCACCTGGTTTGTCTaGATGTTCTCATGGTACACC +
Preference number: 5 (lower is better)
Translates to: TVSVRTNIIISWEADNLQITWFV*MFSWYT
Trigger: GGTGTACCATGAGAACATCAAGACAAACCAGGTGAT...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CAA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTAACGCTGGCAGATTTTTaGTTCCCTTTGTTTTCTTGC +
Preference number: 5 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLTLADF*FPLFSC
Trigger: GCAAGAAAACAAAGGGAACAAAAAATCTGCCAGCGT...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGTTCATGTTAATGAACTaGACTCGTCTTTGTTCTGCA +
Preference number: 5 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRFMLMN*TRLCSA
Trigger: TGCAGAACAAAGACGAGTCAAGTTCATTAACATGAA...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGTTCATGTTAATGAACTaGACTCGTCTTTGTTCTGCA +
Preference number: 5 (lower is better)
Translates to: CADLNISTPDTTARGYTLFMLMN*TRLCSA
Trigger: TGCAGAACAAAGACGAGTCAAGTTCATTAACATGAA...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTATTCTACTTTTTCTTCTaGCGAGGGTCGAGCAATTTG +
Preference number: 5 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLFYFFF*RGSSNL
Trigger: CAAATTGCTCGACCCTCGCAAGAAGAAAAAGTAGAA...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTTTCTACTTTTTCTTCTaGCGAGGGTCGAGCAATTTG +
Preference number: 5 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFFYFFF*RGSSNL
Trigger: CAAATTGCTCGACCCTCGCAAGAAGAAAAAGTAGAA...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp ATAAACATGCAGTGGAAAACTGGCTGTCAGAATACTTTTATGAAGAGTATTAGGAGCGACACTTTCACATaGAGACACATCTCGCTCTTC +
Preference number: 5 (lower is better)
Translates to: INMQWKTGCQNTFMKSIRSDTFT*RHISLF
Trigger: GAAGAGCGAGATGTGTCTCAATGTGAAAGTGTCGCT...CCTAATACTCTTCATAAAAGTATTCTGACAGCCAGTTTTCCACTGCATGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CAA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAACATCTTCAGCTGGTTTaGTACTTGGAACTGCTAAGG +
Preference number: 5 (lower is better)
Translates to: TVSVRTNIIISWEADNLQHLQLV*YLELLR
Trigger: CCTTAGCAGTTCCAAGTACAAAACCAGCTGAAGATG...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CAA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAACCTTTGGGCATTTATTaGCTGAGCTACCACCAAATC +
Preference number: 5 (lower is better)
Translates to: TVSVRTNIIISWEADNLQPLGIY*LSYHQI
Trigger: GATTTGGTGGTAGCTCAGCAAATAAATGCCCAAAGG...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CAA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAGCAGATCCAGTGGATTaGGTTTTAACGGAGATGAGA +
Preference number: 5 (lower is better)
Translates to: TVSVRTNIIISWEADNLQADPVD*VLTEMR
Trigger: TCTCATCTCCGTTAAAACCAAATCCACTGGATCTGC...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CAA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATGAGATTAGTTATCACTaGATGTGGAGCAGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNEISYH*MWSRLK
Trigger: CTTCAGCCTGCTCCACATCAAGTGATAACTAATCTC...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAACAGGAGACTCCCTCATaGACATCCCTTGCTTTATAT +
Preference number: 5 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIEQETPS*TSLALY
Trigger: ATATAAAGCAAGGGATGTCAATGAGGGAGTCTCCTG...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp GGAGGACTGATCTCCTTTACTGATTGGTCTAAATTCAAAAGTGAATTGGTTAAATTTCAGTTGTTGCTCTaGGTGTCCCCTGCATTATGG +
Preference number: 5 (lower is better)
Translates to: GGLISFTDWSKFKSELVKFQLLL*VSPALW
Trigger: CCATAATGCAGGGGACACCAAGAGCAACAACTGAAA...TTTAACCAATTCACTTTTGAATTTAGACCAATCAGTAAAGGAGATCAGTCCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CAA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAATGTTGTCAAACTTTATaGGTGTGCCCTGGGAAATGG +
Preference number: 5 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIECCQTL*VCPGKW
Trigger: CCATTTCCCAGGGCACACCAATAAAGTTTGACAACA...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp CTCTACATCTCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAACCCGTGATTAAGGATTaGACATTGTGTTTGATGGCA +
Preference number: 5 (lower is better)
Translates to: LYISTLHYYYSPLNCLYQPVIKD*TLCLMA
Trigger: TGCCATCAAACACAATGTCAAATCCTTAATCACGGG...TTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGAGATGTAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTACCCGTGATTAAGGATTaGACATTGTGTTTGATGGCA +
Preference number: 5 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLPVIKD*TLCLMA
Trigger: TGCCATCAAACACAATGTCAAATCCTTAATCACGGG...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp GGAGGACTGATCTCCTTTACTGATTGGTCTAAATTCAAAAGTGAATTGGTTAAATCTGGACATGGTGTTTaGATAACTCACAGGGGTCCT +
Preference number: 5 (lower is better)
Translates to: GGLISFTDWSKFKSELVKSGHGV*ITHRGP
Trigger: AGGACCCCTGTGAGTTATCAAAACACCATGTCCAGA...TTTAACCAATTCACTTTTGAATTTAGACCAATCAGTAAAGGAGATCAGTCCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CAA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATACATGCTTACTCTCTTTaGTTTTGGACACATCCATCT +
Preference number: 5 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVIHAYSL*FWTHPS
Trigger: AGATGGATGTGTCCAAAACAAAAGAGAGTAAGCATG...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp AGAAAAGGAATACTTAGGGGCATGGTTAAATTACCAGTGTGCGTAACAGTGAGGATCTTGTGTGATAATTaGACAGATGTGATCAGCAAG +
Preference number: 5 (lower is better)
Translates to: RKGILRGMVKLPVCVTVRILCDN*TDVISK
Trigger: CTTGCTGATCACATCTGTCAAATTATCACACAAGAT...CCTCACTGTTACGCACACTGGTAATTTAACCATGCCCCTAAGTATTCCTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAATTCCTGCTGTTTGACTaGCTGATCAGCTTTGGTTTG +
Preference number: 5 (lower is better)
Translates to: DLNISTPDTTARGYTLQKFLLFD*LISFGL
Trigger: CAAACCAAAGCTGATCAGCAAGTCAAACAGCAGGAA...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CTCCAGGTGATGGTAAATAAAGTAATACGCACATGCATTATGATGAGGATGGAGTTCAAAACAAAAGCTTaGTTGGGCTGCATCAAATGC +
Preference number: 5 (lower is better)
Translates to: LQVMVNKVIRTCIMMRMEFKTKA*LGCIKC
Trigger: GCATTTGATGCAGCCCAACAAAGCTTTTGTTTTGAA...CTCCATCCTCATCATAATGCATGTGCGTATTACTTTATTTACCATCACCTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CAA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTTTAACAGTAAACTCTaGTCCCAAGGGAGCAAAGTG +
Preference number: 5 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRFNSKL*SQGSKV
Trigger: CACTTTGCTCCCTTGGGACAAGAGTTTACTGTTAAA...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAAACAGGAGTGAAAGCTTaGACTGAAGACAAATGTGGG +
Preference number: 5 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIETGVKA*TEDKCG
Trigger: CCCACATTTGTCTTCAGTCAAAGCTTTCACTCCTGT...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTAGATCTAAAGTTTATGTaGGGGACCTCAGGTATACAG +
Preference number: 5 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLDLKFM*GTSGIQ
Trigger: CTGTATACCTGAGGTCCCCAACATAAACTTTAGATC...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTGATCTAAAGTTTATGTaGGGGACCTCAGGTATACAG +
Preference number: 5 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFDLKFM*GTSGIQ
Trigger: CTGTATACCTGAGGTCCCCAACATAAACTTTAGATC...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGGATATCTCTTTTGTTTaGGACACATCCATCTGGGGT +
Preference number: 5 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRDISFV*DTSIWG
Trigger: ACCCCAGATGGATGTGTCCAAAACAAAAGAGATATC...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000395851.5
CDS-3UTR CAA 90 bp TGCGCTGATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGGAGAAGATATCTCTTTaGTTTTGGACACATCCATCT +
Preference number: 5 (lower is better)
Translates to: CADLNISTPDTTARGYTLEKISL*FWTHPS
Trigger: AGATGGATGTGTCCAAAACAAAAGAGATATCTTCTC...CAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATCAGCGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395851.5
CDS-3UTR CAA 90 bp ATCTCCTTTTCATGGTCAGTCCAAACATTCATAAACTGCCTATCTTTATACACTTTCTCATGGTACACCTaGGTATCTGATGGCTGGTTA +
Preference number: 5 (lower is better)
Translates to: ISFSWSVQTFINCLSLYTFSWYT*VSDGWL
Trigger: TAACCAGCCATCAGATACCAAGGTGTACCATGAGAA...AGTGTATAAAGATAGGCAGTTTATGAATGTTTGGACTGACCATGAAAAGGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR CAA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAACGCTGGCAGATTTTTaGTTCCCTTTGTTTTCTTGC +
Preference number: 5 (lower is better)
Translates to: TVSVRTNIIISWEADNLQTLADF*FPLFSC
Trigger: GCAAGAAAACAAAGGGAACAAAAAATCTGCCAGCGT...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CAA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTAGAACTTGACTCGTCTTaGTTCTGCATCAAACATCAT +
Preference number: 5 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLELDSS*FCIKHH
Trigger: ATGATGTTTGATGCAGAACAAAGACGAGTCAAGTTC...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAATTCTACTTTTTCTTCTaGCGAGGGTCGAGCAATTTG +
Preference number: 5 (lower is better)
Translates to: TVSVRTNIIISWEADNLQFYFFF*RGSSNL
Trigger: CAAATTGCTCGACCCTCGCAAGAAGAAAAAGTAGAA...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CAA 90 bp GGAGGACTGATCTCCTTTACTGATTGGTCTAAATTCAAAAGTGAATTGGTTAAACATCTTCAGCTGGTTTaGTACTTGGAACTGCTAAGG +
Preference number: 5 (lower is better)
Translates to: GGLISFTDWSKFKSELVKHLQLV*YLELLR
Trigger: CCTTAGCAGTTCCAAGTACAAAACCAGCTGAAGATG...TTTAACCAATTCACTTTTGAATTTAGACCAATCAGTAAAGGAGATCAGTCCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CAA 90 bp CCCCTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATATCATATGGTTTTCCTTaGGTAATGGCACCTTCAAAT +
Preference number: 5 (lower is better)
Translates to: PLSSYQWHSPKTVSIYVISYGFP*VMAPSN
Trigger: ATTTGAAGGTGCCATTACCAAAGGAAAACCATATGA...TATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp CTCCAGGTGATGGTAAATAAAGTAATACGCACATGCATTATGATGAGGATGGAGTTAAGATTGTCTGTCTaGTGTTCTCCATTGCGTAAA +
Preference number: 5 (lower is better)
Translates to: LQVMVNKVIRTCIMMRMELRLSV*CSPLRK
Trigger: TTTACGCAATGGAGAACACAAGACAGACAATCTTAA...CTCCATCCTCATCATAATGCATGTGCGTATTACTTTATTTACCATCACCTGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CAA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATATTGTTGGAGGCATATaGGTCAGGTCAATGATTCCT +
Preference number: 5 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNIVGGI*VRSMIP
Trigger: AGGAATCATTGACCTGACCAATATGCCTCCAACAAT...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp AAGGACTGTGTTCACCATGAGTTTTTCAGGATGCAGCATAAAGCTTATCTAAATATTACACTGGTTCCATaGGTTCCTTGGAAAACACTG +
Preference number: 5 (lower is better)
Translates to: KDCVHHEFFRMQHKAYLNITLVP*VPWKTL
Trigger: CAGTGTTTTCCAAGGAACCAATGGAACCAGTGTAAT...ATTTAGATAAGCTTTATGCTGCATCCTGAAAAACTCATGGTGAACACAGTCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAAGGATCATTTTCCGCTaGATTTGCCTTAACAACCTC +
Preference number: 5 (lower is better)
Translates to: DLNISTPDTTARGYTLQKRIIFR*ICLNNL
Trigger: GAGGTTGTTAAGGCAAATCAAGCGGAAAATGATCCT...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTAGTCTGCGAGGAAACTaGATTTCTAGCAAAATCTTG +
Preference number: 5 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFSLRGN*ISSKIL
Trigger: CAAGATTTTGCTAGAAATCAAGTTTCCTCGCAGACT...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTATTCAAAACAAAAGCTTaGTTGGGCTGCATCAAATGC +
Preference number: 5 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLFKTKA*LGCIKC
Trigger: GCATTTGATGCAGCCCAACAAAGCTTTTGTTTTGAA...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp ATAAACATGCAGTGGAAAACTGGCTGTCAGAATACTTTTATGAAGAGTATTAGGACGCTGGCAGATTTTTaGTTCCCTTTGTTTTCTTGC +
Preference number: 5 (lower is better)
Translates to: INMQWKTGCQNTFMKSIRTLADF*FPLFSC
Trigger: GCAAGAAAACAAAGGGAACAAAAAATCTGCCAGCGT...CCTAATACTCTTCATAAAAGTATTCTGACAGCCAGTTTTCCACTGCATGTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CAA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAAGAACTTGACTCGTCTTaGTTCTGCATCAAACATCAT +
Preference number: 5 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIEELDSS*FCIKHH
Trigger: ATGATGTTTGATGCAGAACAAAGACGAGTCAAGTTC...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAGAACTTGACTCGTCTTaGTTCTGCATCAAACATCAT +
Preference number: 5 (lower is better)
Translates to: TVSVRTNIIISWEADNLQELDSS*FCIKHH
Trigger: ATGATGTTTGATGCAGAACAAAGACGAGTCAAGTTC...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CAA 90 bp ATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCATCTATTCATGTTAATGAACTaGACTCGTCTTTGTTCTGCA +
Preference number: 5 (lower is better)
Translates to: ISTPDTTARGYTLQKGHLFMLMN*TRLCSA
Trigger: TGCAGAACAAAGACGAGTCAAGTTCATTAACATGAA...TAGATGACCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAAGGATGCTGGATAAACTaGTCCTTAAAGATCTCCTTT +
Preference number: 5 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIEGCWIN*SLKISF
Trigger: AAAGGAGATCTTTAAGGACAAGTTTATCCAGCATCC...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAAGGATGCTGGATAAACTaGTCCTTAAAGATCTCCTTT +
Preference number: 5 (lower is better)
Translates to: TVSVRTNIIISWEADNLQGCWIN*SLKISF
Trigger: AAAGGAGATCTTTAAGGACAAGTTTATCCAGCATCC...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CAA 90 bp TTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAGGTCCAAGTCTCTTTCTTaGGTATTATCACCTTCAACT +
Preference number: 5 (lower is better)
Translates to: FEHKYTRYYSKGIYTAKRSKSLS*VLSPST
Trigger: AGTTGAAGGTGATAATACCAAAGAAAGAGACTTGGA...CCTTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp TCAACCCTCCACTATTATTATAGTCCACTGAATTGCCTGTATCAAAGGCAGTTTTCATATGGTTTTCCTTaGGTAATGGCACCTTCAAAT +
Preference number: 5 (lower is better)
Translates to: STLHYYYSPLNCLYQRQFSYGFP*VMAPSN
Trigger: ATTTGAAGGTGCCATTACCAAAGGAAAACCATATGA...AAACTGCCTTTGATACAGGCAATTCAGTGGACTATAATAATAGTGGAGGGTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp ATAAACATGCAGTGGAAAACTGGCTGTCAGAATACTTTTATGAAGAGTATTAGGATTACACTGGTTCCATaGGTTCCTTGGAAAACACTG +
Preference number: 5 (lower is better)
Translates to: INMQWKTGCQNTFMKSIRITLVP*VPWKTL
Trigger: CAGTGTTTTCCAAGGAACCAATGGAACCAGTGTAAT...CCTAATACTCTTCATAAAAGTATTCTGACAGCCAGTTTTCCACTGCATGTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS-3UTR CAA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAACATGCTTACTCTCTTTaGTTTTGGACACATCCATCT +
Preference number: 5 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIEHAYSL*FWTHPS
Trigger: AGATGGATGTGTCCAAAACAAAAGAGAGTAAGCATG...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAAAGTCTGCGAGGAAACTaGATTTCTAGCAAAATCTTG +
Preference number: 5 (lower is better)
Translates to: DLNISTPDTTARGYTLQKSLRGN*ISSKIL
Trigger: CAAGATTTTGCTAGAAATCAAGTTTCCTCGCAGACT...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAAGATGTATTTTCAAGCTaGGTGAAGAATGAAGGCAAG +
Preference number: 5 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIEDVFSS*VKNEGK
Trigger: CTTGCCTTCATTCTTCACCAAGCTTGAAAATACATC...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp ATCTCCTTTTCATGGTCAGTCCAAACATTCATAAACTGCCTATCTTTATACACTGAACTTGACTCGTCTTaGTTCTGCATCAAACATCAT +
Preference number: 5 (lower is better)
Translates to: ISFSWSVQTFINCLSLYTELDSS*FCIKHH
Trigger: ATGATGTTTGATGCAGAACAAAGACGAGTCAAGTTC...AGTGTATAAAGATAGGCAGTTTATGAATGTTTGGACTGACCATGAAAAGGAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR CAA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAATTCATGTTAATGAACTaGACTCGTCTTTGTTCTGCA +
Preference number: 5 (lower is better)
Translates to: TVSVRTNIIISWEADNLQFMLMN*TRLCSA
Trigger: TGCAGAACAAAGACGAGTCAAGTTCATTAACATGAA...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CAA 90 bp ATCTCCTTTTCATGGTCAGTCCAAACATTCATAAACTGCCTATCTTTATACACTGGATGCTGGATAAACTaGTCCTTAAAGATCTCCTTT +
Preference number: 5 (lower is better)
Translates to: ISFSWSVQTFINCLSLYTGCWIN*SLKISF
Trigger: AAAGGAGATCTTTAAGGACAAGTTTATCCAGCATCC...AGTGTATAAAGATAGGCAGTTTATGAATGTTTGGACTGACCATGAAAAGGAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR CAA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAATCCAAGTCTCTTTCTTaGGTATTATCACCTTCAACT +
Preference number: 5 (lower is better)
Translates to: TVSVRTNIIISWEADNLQSKSLS*VLSPST
Trigger: AGTTGAAGGTGATAATACCAAAGAAAGAGACTTGGA...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CAA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAATCATATGGTTTTCCTTaGGTAATGGCACCTTCAAAT +
Preference number: 5 (lower is better)
Translates to: DLNISTPDTTARGYTLQKSYGFP*VMAPSN
Trigger: ATTTGAAGGTGCCATTACCAAAGGAAAACCATATGA...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp GATTTGAACATAAGTACACCAGATACTACAGCAAGGGGATATACACTGCAAAAATTAAGATTGTCTGTCTaGTGTTCTCCATTGCGTAAA +
Preference number: 5 (lower is better)
Translates to: DLNISTPDTTARGYTLQKLRLSV*CSPLRK
Trigger: TTTACGCAATGGAGAACACAAGACAGACAATCTTAA...TTTTTGCAGTGTATATCCCCTTGCTGTAGTATCTGGTGTACTTATGTTCAAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS-3UTR CAA 90 bp CTTTCCAGTTACCAGTGGCATTCTCCCAAAACTGTTAGTATCTATGTTATAGAAATCTTGTGTGATAATTaGACAGATGTGATCAGCAAG +
Preference number: 5 (lower is better)
Translates to: LSSYQWHSPKTVSIYVIEILCDN*TDVISK
Trigger: CTTGCTGATCACATCTGTCAAATTATCACACAAGAT...TTCTATAACATAGATACTAACAGTTTTGGGAGAATGCCACTGGTAACTGGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268712.8
ENST00000395857.7
CDS-3UTR CAA 90 bp ACTGTGTCTGTTAGGACAAATATAATAATCAGTTGGGAGGCTGACAACTTACAATTCATAAAAGTTCTCTaGGTGATAGCTCTATCTACC +
Preference number: 5 (lower is better)
Translates to: TVSVRTNIIISWEADNLQFIKVL*VIALST
Trigger: GGTAGATAGAGCTATCACCAAGAGAACTTTTATGAA...TTGTAAGTTGTCAGCCTCCCAACTGATTATTATATTTGTCCTAACAGACACAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS-3UTR CAA 90 bp ATCTCCTTTTCATGGTCAGTCCAAACATTCATAAACTGCCTATCTTTATACACTTTCATGTTAATGAACTaGACTCGTCTTTGTTCTGCA +
Preference number: 5 (lower is better)
Translates to: ISFSWSVQTFINCLSLYTFMLMN*TRLCSA
Trigger: TGCAGAACAAAGACGAGTCAAGTTCATTAACATGAA...AGTGTATAAAGATAGGCAGTTTATGAATGTTTGGACTGACCATGAAAAGGAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460276.5
CDS-3UTR CAA 90 bp ATAAACATGCAGTGGAAAACTGGCTGTCAGAATACTTTTATGAAGAGTATTAGGTCCAAGTCTCTTTCTTaGGTATTATCACCTTCAACT +
Preference number: 5 (lower is better)
Translates to: INMQWKTGCQNTFMKSIRSKSLS*VLSPST
Trigger: AGTTGAAGGTGATAATACCAAAGAAAGAGACTTGGA...CCTAATACTCTTCATAAAAGTATTCTGACAGCCAGTTTTCCACTGCATGTTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268712.8
CDS CCA 72 bp AAGCGTGGGAGCCGACGTGCGCCCCGGCCTGAGGAGTaGGACGCGGCCACGGCGCGCGGCCCTACACCGGGA +
Preference number: 6 (lower is better)
Translates to: KRGSRRAPRPEE*DAATARGPTPG
Trigger: TCCCGGTGTAGGGCCGCGCGCCGTGGCCGCGTCCCACTCCTCAGGCCGGGGCGCACGTCGGCTCCCACGCTT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268712.8
ENST00000395857.7
ENST00000411510.5
ENST00000436828.5
ENST00000460276.5
ENST00000582357.5
ENST00000585296.1
CDS GCA 72 bp CGTGGTGGGGCGGCGGCGGCCTCCTCTGGCCGGAGCTaGGTACAGGGAAGCCGGTCCCCTCGTGGCTGGGAG +
Preference number: 6 (lower is better)
Translates to: RGGAAAASSGRS*VQGSRSPRGWE
Trigger: CTCCCAGCCACGAGGGGACCGGCTTCCCTGTACGCAGCTCCGGCCAGAGGAGGCCGCCGCCGCCCCACCACG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430577.2
CDS CCA 72 bp TGGCCGGAGCTGCGTACAGGGAAGCCGGTCCCCTCGTaGCTGGGAGCTGGAGGGGTGCATTTCGACCTGCCC +
Preference number: 6 (lower is better)
Translates to: WPELRTGKPVPS*LGAGGVHFDLP
Trigger: GGGCAGGTCGAAATGCACCCCTCCAGCTCCCAGCCACGAGGGGACCGGCTTCCCTGTACGCAGCTCCGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430577.2
CDS GCA 72 bp GCGCCCCGTGGATCCAGGAGTCACGTCATCAGACAGTaGTGCCCGGGCAGCAGCAGTGGCAGAAGCTGCGTC +
Preference number: 6 (lower is better)
Translates to: APRGSRSHVIRQ*CPGSSSGRSCV
Trigger: GACGCAGCTTCTGCCACTGCTGCTGCCCGGGCAGCACTGTCTGATGACGTGACTCCTGGATCCACGGGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583234.1
CDS CCA 72 bp CGGAGCTGCGTACAGGGAAGCCGGTCCCCTCGTGGCTaGGAGCTGGAGGGGTGCATTTCGACCTGCCCAAGA +
Preference number: 6 (lower is better)
Translates to: RSCVQGSRSPRG*ELEGCISTCPR
Trigger: TCTTGGGCAGGTCGAAATGCACCCCTCCAGCTCCCAGCCACGAGGGGACCGGCTTCCCTGTACGCAGCTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430577.2
CDS GCA 72 bp CGGTGGCAGAGGTGGTGGGGGCTCTTCAGTAGCCGCTaGGGCTGCAGCACTGGCAGCTGCAGCTTCGTTTGT +
Preference number: 6 (lower is better)
Translates to: RWQRWWGLFSSR*GCSTGSCSFVC
Trigger: ACAAACGAAGCTGCAGCTGCCAGTGCTGCAGCCGCAGCGGCTACTGAAGAGCCCCCACCACCTCTGCCACCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
ENST00000583226.1
CDS TCA 72 bp CACTGGCAGCTGCAGCTTCGTTTGTCATGGACCTGGTaGTCCGGCCCTTACGGCGGCCCTGACTGTTGGCAG +
Preference number: 6 (lower is better)
Translates to: HWQLQLRLSWTW*SGPYGGPDCWQ
Trigger: CTGCCAACAGTCAGGGCCGCCGTAAGGGCCGGATCACCAGGTCCATGACAAACGAAGCTGCAGCTGCCAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
ENST00000583226.1
CDS GCA 72 bp GCGTGGGCAGGTGGCTCCGATAAACCTCGCCTGCAGTaGTGCCTCTGTGATGGGGATCAAACGGACTGTGGC +
Preference number: 6 (lower is better)
Translates to: AWAGGSDKPRLQ*CLCDGDQTDCG
Trigger: GCCACAGTCCGTTTGATCCCCATCACAGAGGCAGCACTGCAGGCGAGGTTTATCGGAGCCACCTGCCCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
CDS GCA 72 bp GGAAGCCGGTCCCCTCGTGGCTGGGAGCTGGAGGGGTaGATTTCGACCTGCCCAAGATACTTTCTAGGGCTC +
Preference number: 6 (lower is better)
Translates to: GSRSPRGWELEG*ISTCPRYFLGL
Trigger: GAGCCCTAGAAAGTATCTTGGGCAGGTCGAAATGCACCCCTCCAGCTCCCAGCCACGAGGGGACCGGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430577.2
CDS CCA 72 bp CTCCACAGGCTCTGTAGAAATGGGTTCTGGTGGCGGTaGCAGAGGTGGTGGGGGCTCTTCAGTAGCCGCTGC +
Preference number: 6 (lower is better)
Translates to: LHRLCRNGFWWR*QRWWGLFSSRC
Trigger: GCAGCGGCTACTGAAGAGCCCCCACCACCTCTGCCACCGCCACCAGAACCCATTTCTACAGAGCCTGTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
ENST00000583226.1
CDS CCA 72 bp GCGTACAGGGAAGCCGGTCCCCTCGTGGCTGGGAGCTaGAGGGGTGCATTTCGACCTGCCCAAGATACTTTC +
Preference number: 6 (lower is better)
Translates to: AYREAGPLVAGS*RGAFRPAQDTF
Trigger: GAAAGTATCTTGGGCAGGTCGAAATGCACCCCTCCAGCTCCCAGCCACGAGGGGACCGGCTTCCCTGTACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430577.2
CDS CAA 72 bp CAGTGGGGCAGGCTCTCGCTCCCAGATCCTGTTCTGTaGGTGAGGAGCTGCTTGGTTCACCGCAGAGGGAGC +
Preference number: 6 (lower is better)
Translates to: QWGRLSLPDPVL*VRSCLVHRRGS
Trigger: GCTCCCTCTGCGGTGAACCAAGCAGCTCCTCACCAACAGAACAGGATCTGGGAGCGAGAGCCTGCCCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000464381.5
ENST00000470782.5
ENST00000580617.5
CDS TCA 72 bp TGTGGACCTAAGAACGGAGGGGCCAGAGCTTACCACTaGCGTGTGCCGGGAACGCACGGTCTCGCCTGCTTT +
Preference number: 6 (lower is better)
Translates to: CGPKNGGARAYH*RVPGTHGLACF
Trigger: AAAGCAGGCGAGACCGTGCGTTCCCGGCACACGTCAGTGGTAAGCTCTGGCCCCTCCGTTCTTAGGTCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
CDS TCA 72 bp GGGGCAGGCTCTCGCTCCCAGATCCTGTTCTGTTGGTaGGGAGCTGCTTGGTTCACCGCAGAGGGAGCACAT +
Preference number: 6 (lower is better)
Translates to: GAGSRSQILFCW*GAAWFTAEGAH
Trigger: ATGTGCTCCCTCTGCGGTGAACCAAGCAGCTCCTCACCAACAGAACAGGATCTGGGAGCGAGAGCCTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000464381.5
ENST00000470782.5
ENST00000580617.5
CDS GCA 72 bp CTAAGAACGGAGGGGCCAGAGCTTACCACTGACGTGTaGCGGGAACGCACGGTCTCGCCTGCTTTCACATCC +
Preference number: 6 (lower is better)
Translates to: LRTEGPELTTDV*RERTVSPAFTS
Trigger: GGATGTGAAAGCAGGCGAGACCGTGCGTTCCCGGCACACGTCAGTGGTAAGCTCTGGCCCCTCCGTTCTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
CDS GCA 72 bp TCAGCAAGTGTGATCAGCCGATGGGTCCTGGGCACTTaGCCCATTCCCTCTGCCTGTGAAGAAGGGGGCAGC +
Preference number: 6 (lower is better)
Translates to: SASVISRWVLGT*PIPSACEEGGS
Trigger: GCTGCCCCCTTCTTCACAGGCAGAGGGAATGGGGCAAGTGCCCAGGACCCATCGGCTGATCACACTTGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000464381.5
ENST00000470782.5
CDS CCA 72 bp CAGCCGCTGCAGGATCCAAAGCCCTGTGAAAAGGCATaGCTGGATCCAAGTGCGTGGGCAGGTGGCTCCGAT +
Preference number: 6 (lower is better)
Translates to: QPLQDPKPCEKA*LDPSAWAGGSD
Trigger: ATCGGAGCCACCTGCCCACGCACTTGGATCCAGCCATGCCTTTTCACAGGGCTTTGGATCCTGCAGCGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
CDS CCA 72 bp GCTGTCCTGTTTCTCATGCACAACCGGAACCTGGGGTaGGGAGATGGGCTCGTAGGGCTCCGAAGAGACGTG +
Preference number: 6 (lower is better)
Translates to: AVLFLMHNRNLG*GDGLVGLRRDV
Trigger: CACGTCTCTTCGGAGCCCTACGAGCCCATCTCCCCACCCCAGGTTCCGGTTGTGCATGAGAAACAGGACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000464381.5
ENST00000470782.5
ENST00000579606.1
ENST00000580554.1
ENST00000583234.1
CDS GCA 72 bp TGGGCAGGTGGCTCCGATAAACCTCGCCTGCAGTGCTaGCTCTGTGATGGGGATCAAACGGACTGTGGCTCA +
Preference number: 6 (lower is better)
Translates to: WAGGSDKPRLQC*LCDGDQTDCGS
Trigger: TGAGCCACAGTCCGTTTGATCCCCATCACAGAGGCAGCACTGCAGGCGAGGTTTATCGGAGCCACCTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
CDS GCA 72 bp CAAGTGCGTGGGCAGGTGGCTCCGATAAACCTCGCCTaGAGTGCTGCCTCTGTGATGGGGATCAAACGGACT +
Preference number: 6 (lower is better)
Translates to: QVRGQVAPINLA*SAASVMGIKRT
Trigger: AGTCCGTTTGATCCCCATCACAGAGGCAGCACTGCAGGCGAGGTTTATCGGAGCCACCTGCCCACGCACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
CDS GCA 72 bp TTACTGAAGGGGAAGGGGAGCGAACATATCCATGACTaGCAGGTCGGCCAGGCTGTTCTGAGCCTGGCCGCA +
Preference number: 6 (lower is better)
Translates to: LLKGKGSEHIHD*QVGQAVLSLAA
Trigger: TGCGGCCAGGCTCAGAACAGCCTGGCCGACCTGGCAGTCATGGATATGTTCGCTCCCCTTCCCCTTCAGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
ENST00000584872.1
CDS CCA 72 bp AAGCCCTGTGAAAAGGCATGGCTGGATCCAAGTGCGTaGGCAGGTGGCTCCGATAAACCTCGCCTGCAGTGC +
Preference number: 6 (lower is better)
Translates to: KPCEKAWLDPSA*AGGSDKPRLQC
Trigger: GCACTGCAGGCGAGGTTTATCGGAGCCACCTGCCCACGCACTTGGATCCAGCCATGCCTTTTCACAGGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
CDS CCA 72 bp GTTTCTCATGCACAACCGGAACCTGGGGTGGGGAGATaGGCTCGTAGGGCTCCGAAGAGACGTGACTCCTCT +
Preference number: 6 (lower is better)
Translates to: VSHAQPEPGVGR*ARRAPKRRDSS
Trigger: AGAGGAGTCACGTCTCTTCGGAGCCCTACGAGCCCATCTCCCCACCCCAGGTTCCGGTTGTGCATGAGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000464381.5
ENST00000470782.5
ENST00000579606.1
ENST00000580554.1
ENST00000583234.1
CDS CCA 72 bp GGGCTCGTAGGGCTCCGAAGAGACGTGACTCCTCTCTaGGGATTTTCCAGGCCTTCCCCTGGATTTGTCCAC +
Preference number: 6 (lower is better)
Translates to: GLVGLRRDVTPL*GFSRPSPGFVH
Trigger: GTGGACAAATCCAGGGGAAGGCCTGGAAAATCCCCAGAGAGGAGTCACGTCTCTTCGGAGCCCTACGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579606.1
CDS GCA 72 bp GTGAGGAGCTGCTTGGTTCACCGCAGAGGGAGCACATaGAATCGGTGTTGGTGGAGTACTGCTGAGCATCCG +
Preference number: 6 (lower is better)
Translates to: VRSCLVHRRGST*NRCWWSTAEHP
Trigger: CGGATGCTCAGCAGTACTCCACCAACACCGATTGCATGTGCTCCCTCTGCGGTGAACCAAGCAGCTCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000464381.5
ENST00000470782.5
ENST00000580617.5
CDS GCA 72 bp GCTCTGGCTGGAATTCGCACCAAGCCCTCACTGAAATaGTGGGCGAGGCCGATTTGTCCACGATGTTGCTCC +
Preference number: 6 (lower is better)
Translates to: ALAGIRTKPSLK*WARPICPRCCS
Trigger: GGAGCAACATCGTGGACAAATCGGCCTCGCCCAGCATTTCAGTGAGGGCTTGGTGCGAATTCCAGCCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430577.2
CDS GCA 72 bp AGCAGGCTGAAGGACTGGCGGGACACTATAGCGGGCTaGACTCATATCAGGCTGTGGAGCGGCTTTACTGAC +
Preference number: 6 (lower is better)
Translates to: SRLKDWRDTIAG*THIRLWSGFTD
Trigger: GTCAGTAAAGCCGCTCCACAGCCTGATATGAGTGCAGCCCGCTATAGTGTCCCGCCAGTCCTTCAGCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436068.1
CDS CCA 72 bp GGCCCTGACTGTTGGCAGTCTTTCGCCCCCGGGGTGTaGCTTGCTCTCTTTCCTCAGTTTCTTCTGCTGTAC +
Preference number: 6 (lower is better)
Translates to: GPDCWQSFAPGV*LALFPQFLLLY
Trigger: GTACAGCAGAAGAAACTGAGGAAAGAGAGCAAGCCACACCCCGGGGGCGAAAGACTGCCAACAGTCAGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
ENST00000583226.1
CDS CCA 72 bp CGCTGCAGGATCCAAAGCCCTGTGAAAAGGCATGGCTaGATCCAAGTGCGTGGGCAGGTGGCTCCGATAAAC +
Preference number: 6 (lower is better)
Translates to: RCRIQSPVKRHG*IQVRGQVAPIN
Trigger: GTTTATCGGAGCCACCTGCCCACGCACTTGGATCCAGCCATGCCTTTTCACAGGGCTTTGGATCCTGCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
CDS CCA 72 bp GGGCTCGTAGGGCTCCGAAGAGACGTGACTCCTCTCTaGGGATTTTCCAGGCCTACTTCCCCTGGATTTGTC +
Preference number: 6 (lower is better)
Translates to: GLVGLRRDVTPL*GFSRPTSPGFV
Trigger: GACAAATCCAGGGGAAGTAGGCCTGGAAAATCCCCAGAGAGGAGTCACGTCTCTTCGGAGCCCTACGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000464381.5
ENST00000470782.5
ENST00000580554.1
CDS CCA 72 bp AGCCGCAGGATCCAAAGCCCTGTGAAAAGGCATGGCTaGATCCAAGTGCGTGGGCAGGTGGCTCCGATAAAC +
Preference number: 6 (lower is better)
Translates to: SRRIQSPVKRHG*IQVRGQVAPIN
Trigger: GTTTATCGGAGCCACCTGCCCACGCACTTGGATCCAGCCATGCCTTTTCACAGGGCTTTGGATCCTGCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
CDS CAA 90 bp ACGGCGGCCCTGACTGTTGGCAGTCTTTCGCCCCCGGGGTGTGGCTaGCTCTCTTTCCTCAGTTTCTTCTGCTGTACCATCTATCTTGTC +
Preference number: 6 (lower is better)
Translates to: TAALTVGSLSPPGCG*LSFLSFFCCTIYLV
Trigger: GACAAGATAGATGGTACAGCAGAAGAAACTGAGGAAAGAGAGCAAGCCACACCCCGGGGGCGAAAGACTGCCAACAGTCAGGGCCGCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
ENST00000583226.1
CDS TCA 72 bp CTAGGGCTCTGGCTGGAATTCGCACCAAGCCCTCACTaGAATGCTGGGCGAGGCCGATTTGTCCACGATGTT +
Preference number: 6 (lower is better)
Translates to: LGLWLEFAPSPH*NAGRGRFVHDV
Trigger: AACATCGTGGACAAATCGGCCTCGCCCAGCATTTCAGTGAGGGCTTGGTGCGAATTCCAGCCAGAGCCCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430577.2
CDS CCA 72 bp GGAGACCCAGTGGCTGCTCTCTTGGGGAGAGTCCTCTaGCCACATCTGGACGCAAGTTCACTTGCATCTGTT +
Preference number: 6 (lower is better)
Translates to: GDPVAALLGRVL*PHLDASSLASV
Trigger: AACAGATGCAAGTGAACTTGCGTCCAGATGTGGCCAGAGGACTCTCCCCAAGAGAGCAGCCACTGGGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
ENST00000584872.1
CDS CAA 90 bp AGGGGTCCTCCGTGCACTGGTGTCATCATAAATCCCAGGGCTCAGTaGTGCTTTGGGAGCTTCATGCAGTGTGGACCTAAGAACGGAGGG +
Preference number: 6 (lower is better)
Translates to: RGPPCTGVIINPRAQ*CFGSFMQCGPKNGG
Trigger: CCCTCCGTTCTTAGGTCCACACTGCATGAAGCTCCCAAAGCACAACTGAGCCCTGGGATTTATGATGACACCAGTGCACGGAGGACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
CDS TCA 72 bp CTCATCAGCGCTGCACGTGGCACTGGAATCATTGTCTaGCTGGGGCTCGGGCCTTTGGGCATTTATTTGCTG +
Preference number: 6 (lower is better)
Translates to: LISAARGTGIIV*LGLGPLGIYLL
Trigger: CAGCAAATAAATGCCCAAAGGCCCGAGCCCCAGTCAGACAATGATTCCAGTGCCACGTGCAGCGCTGATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS TCA 72 bp CCCTTCCTCTCTTCGTGTCTCACCACTGGTCACAACTaGGGTGTTGGCAGTACCAGGCACTACTCCCATAGG +
Preference number: 6 (lower is better)
Translates to: PFLSSCLTTGHN*GVGSTRHYSHR
Trigger: CCTATGGGAGTAGTGCCTGGTACTGCCAACACCTCAGTTGTGACCAGTGGTGAGACACGAAGAGAGGAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000464381.5
ENST00000470782.5
ENST00000579573.2
ENST00000580617.5
ENST00000582565.1
CDS TCA 72 bp GGGCTGCACTCATATCAGGCTGTGGAGCGGCTTTACTaGCTTCTCTTGGAGAAAGCCTACACGGTGAGGCTG +
Preference number: 6 (lower is better)
Translates to: GLHSYQAVERLY*LLLEKAYTVRL
Trigger: CAGCCTCACCGTGTAGGCTTTCTCCAAGAGAAGTCAGTAAAGCCGCTCCACAGCCTGATATGAGTGCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436068.1
CDS CCA 72 bp CTAAGGAGGGAGATGTACTGGGTGCAGTTTCCGTGGTaGGCTCAAGCTCAACCGCAGGTTCTGTGTTTCCTC +
Preference number: 6 (lower is better)
Translates to: LRREMYWVQFPW*AQAQPQVLCFL
Trigger: GAGGAAACACAGAACCTGCGGTTGAGCTTGAGCCCACCACGGAAACTGCACCCAGTACATCTCCCTCCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS CCA 72 bp CTGCTAAGGAGGGAGATGTACTGGGTGCAGTTTCCGTaGTGGGCTCAAGCTCAACCGCAGGTTCTGTGTTTC +
Preference number: 6 (lower is better)
Translates to: LLRREMYWVQFP*WAQAQPQVLCF
Trigger: GAAACACAGAACCTGCGGTTGAGCTTGAGCCCACCACGGAAACTGCACCCAGTACATCTCCCTCCTTAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS CCA 72 bp TTGGTTCACCGCAGAGGGAGCACATGCAATCGGTGTTaGTGGAGTACTGCTGAGCATCCGCATAGTCAGAGG +
Preference number: 6 (lower is better)
Translates to: LVHRRGSTCNRC*WSTAEHPHSQR
Trigger: CCTCTGACTATGCGGATGCTCAGCAGTACTCCACCAACACCGATTGCATGTGCTCCCTCTGCGGTGAACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000464381.5
ENST00000470782.5
ENST00000580617.5
CDS CCA 72 bp CTGGCTGGAATTCGCACCAAGCCCTCACTGAAATGCTaGGCGAGGCCGATTTGTCCACGATGTTGCTCCTTA +
Preference number: 6 (lower is better)
Translates to: LAGIRTKPSLKC*ARPICPRCCSL
Trigger: TAAGGAGCAACATCGTGGACAAATCGGCCTCGCCCAGCATTTCAGTGAGGGCTTGGTGCGAATTCCAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430577.2
CDS CAA 72 bp CTGACTGTTGGCAGTCTTTCGCCCCCGGGGTGTGGCTaGCTCTCTTTCCTCAGTTTCTTCTGCTGTACCATC +
Preference number: 6 (lower is better)
Translates to: LTVGSLSPPGCG*LSFLSFFCCTI
Trigger: GATGGTACAGCAGAAGAAACTGAGGAAAGAGAGCAAGCCACACCCCGGGGGCGAAAGACTGCCAACAGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
ENST00000583226.1
CDS CAA 72 bp TCTGGCACCCTCACTTCAACGTCCACAGAGTCAGCTTaGGTAGCGGGTGGGGGATCACAAACAGAACCCTCT +
Preference number: 6 (lower is better)
Translates to: SGTLTSTSTESA*VAGGGSQTEPS
Trigger: AGAGGGTTCTGTTTGTGATCCCCCACCCGCTACCAAAGCTGACTCTGTGGACGTTGAAGTGAGGGTGCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS CAA 90 bp GCATGGTTTTCTGGCACCCTCACTTCAACGTCCACAGAGTCAGCTTaGGTAGCGGGTGGGGGATCACAAACAGAACCCTCTTCAGCACTG +
Preference number: 6 (lower is better)
Translates to: AWFSGTLTSTSTESA*VAGGGSQTEPSSAL
Trigger: CAGTGCTGAAGAGGGTTCTGTTTGTGATCCCCCACCCGCTACCAAAGCTGACTCTGTGGACGTTGAAGTGAGGGTGCCAGAAAACCATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS CAA 90 bp TCCCCTTCCTCTCTTCGTGTCTCACCACTGGTCACAACTGAGGTGTaGGCAGTACCAGGCACTACTCCCATAGGCTGGGACATGACAACT +
Preference number: 6 (lower is better)
Translates to: SPSSLRVSPLVTTEV*AVPGTTPIGWDMTT
Trigger: AGTTGTCATGTCCCAGCCTATGGGAGTAGTGCCTGGTACTGCCAACACCTCAGTTGTGACCAGTGGTGAGACACGAAGAGAGGAAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000464381.5
ENST00000470782.5
ENST00000579573.2
ENST00000580617.5
ENST00000582565.1
CDS GCA 72 bp GAGCCACGTTCCCTCGCATCCTTGTCCGAGGCAATTTaGCGGGTGATGATCACGTCTATGAAGTTAGCTGCA +
Preference number: 6 (lower is better)
Translates to: EPRSLASLSEAI*RVMITSMKLAA
Trigger: TGCAGCTAACTTCATAGACGTGATCATCACCCGGCAAATTGCCTCGGACAAGGATGCGAGGGAACGTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
CDS CCA 72 bp CACTTCAACGTCCACAGAGTCAGCTTTGGTAGCGGGTaGGGGATCACAAACAGAACCCTCTTCAGCACTGTG +
Preference number: 6 (lower is better)
Translates to: HFNVHRVSFGSG*GITNRTLFSTV
Trigger: CACAGTGCTGAAGAGGGTTCTGTTTGTGATCCCCCACCCGCTACCAAAGCTGACTCTGTGGACGTTGAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS CCA 72 bp ATGGCTCCTGCGGTACCTCTGACTACACCTTCATGTTaGGCCCTGACCAACAGACCCTCAGGTTGTGAGTTT +
Preference number: 6 (lower is better)
Translates to: MAPAVPLTTPSC*ALTNRPSGCEF
Trigger: AAACTCACAACCTGAGGGTCTGTTGGTCAGGGCCCAACATGAAGGTGTAGTCAGAGGTACCGCAGGAGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS CCA 72 bp CGGGACACTATAGCGGGCTGCACTCATATCAGGCTGTaGAGCGGCTTTACTGACTTCTCTTGGAGAAAGCCT +
Preference number: 6 (lower is better)
Translates to: RDTIAGCTHIRL*SGFTDFSWRKP
Trigger: AGGCTTTCTCCAAGAGAAGTCAGTAAAGCCGCTCCACAGCCTGATATGAGTGCAGCCCGCTATAGTGTCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436068.1
CDS CAA 72 bp ACATCCTCATCAGCGCTGCACGTGGCACTGGAATCATaGTCTGACTGGGGCTCGGGCCTTTGGGCATTTATT +
Preference number: 6 (lower is better)
Translates to: TSSSALHVALES*SDWGSGLWAFI
Trigger: AATAAATGCCCAAAGGCCCGAGCCCCAGTCAGACAATGATTCCAGTGCCACGTGCAGCGCTGATGAGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS CAA 72 bp AGAGCCACGTTCCCTCGCATCCTTGTCCGAGGCAATTaGCCGGGTGATGATCACGTCTATGAAGTTAGCTGC +
Preference number: 6 (lower is better)
Translates to: RATFPRILVRGN*PGDDHVYEVSC
Trigger: GCAGCTAACTTCATAGACGTGATCATCACCCGGCAAATTGCCTCGGACAAGGATGCGAGGGAACGTGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
CDS TCA 72 bp CTGTTCTTGTCTCTGCCGCTGCTCCTCCAGGAGTGCTaGCTCATGCATTGCTTTAATGTGTCGCTGGTAGAG +
Preference number: 6 (lower is better)
Translates to: LFLSLPLLLQEC*LMHCFNVSLVE
Trigger: CTCTACCAGCGACACATTAAAGCAATGCATGAGTCAGCACTCCTGGAGGAGCAGCGGCAGAGACAAGAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS TCA 72 bp GGGTCTCTGTTGCAACATGGTCTCCTGAGTTCTTACTaGAGGGGAAGGGGAGCGAACATATCCATGACTGCC +
Preference number: 6 (lower is better)
Translates to: GSLLQHGLLSSY*RGRGANISMTA
Trigger: GGCAGTCATGGATATGTTCGCTCCCCTTCCCCTTCAGTAAGAACTCAGGAGACCATGTTGCAACAGAGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
ENST00000584872.1
CDS GCA 72 bp TGCCCTGGGAAATGGAACCCTCAATTATCGGCCGTGTaGTCTGGACCACTTCTGGAGTTTTCCGACTTTCCT +
Preference number: 6 (lower is better)
Translates to: CPGKWNPQLSAV*SGPLLEFSDFP
Trigger: AGGAAAGTCGGAAAACTCCAGAAGTGGTCCAGAGCACACGGCCGATAATTGAGGGTTCCATTTCCCAGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
CDS CCA 72 bp GTTTTGTACTTGGAACTGCTAAGGAGGGAGATGTACTaGGTGCAGTTTCCGTGGTGGGCTCAAGCTCAACCG +
Preference number: 6 (lower is better)
Translates to: VLYLELLRREMY*VQFPWWAQAQP
Trigger: CGGTTGAGCTTGAGCCCACCACGGAAACTGCACCCAGTACATCTCCCTCCTTAGCAGTTCCAAGTACAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS CCA 72 bp CTGGTAGAGAGCATAGCCGCTCACTGGGGTTCCAATTaGTATGTTACATGGGGTGCAGGATACCATTGGTGG +
Preference number: 6 (lower is better)
Translates to: LVESIAAHWGSN*YVTWGAGYHWW
Trigger: CCACCAATGGTATCCTGCACCCCATGTAACATACCAATTGGAACCCCAGTGAGCGGCTATGCTCTCTACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS CAA 72 bp GCTGGTAGAGAGCATAGCCGCTCACTGGGGTTCCAATaGGTATGTTACATGGGGTGCAGGATACCATTGGTG +
Preference number: 6 (lower is better)
Translates to: AGREHSRSLGFQ*VCYMGCRIPLV
Trigger: CACCAATGGTATCCTGCACCCCATGTAACATACCAATTGGAACCCCAGTGAGCGGCTATGCTCTCTACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS CAA 72 bp CGGAAGCCGAACGCCTTCAGGGAGATTAGTTATCACTaGATGTGGAGCAGGCTGAAGGACTTCCCACTCTCT +
Preference number: 6 (lower is better)
Translates to: RKPNAFREISYH*MWSRLKDFPLS
Trigger: AGAGAGTGGGAAGTCCTTCAGCCTGCTCCACATCAAGTGATAACTAATCTCCCTGAAGGCGTTCGGCTTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS CAA 72 bp CCGTGCACTGGTGTCATCATAAATCCCAGGGCTCAGTaGTGCTTTGGGAGCTTCATGCAGTGTGGACCTAAG +
Preference number: 6 (lower is better)
Translates to: PCTGVIINPRAQ*CFGSFMQCGPK
Trigger: CTTAGGTCCACACTGCATGAAGCTCCCAAAGCACAACTGAGCCCTGGGATTTATGATGACACCAGTGCACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
CDS CAA 72 bp AGGTGTGTTGGGTGTCCTGGAGACATGGAAGCAGAGTaGTACGGCCTGGGAGGGAAAGTAATCTGTGTACCA +
Preference number: 6 (lower is better)
Translates to: RCVGCPGDMEAE*YGLGGKVICVP
Trigger: TGGTACACAGATTACTTTCCCTCCCAGGCCGTACAACTCTGCTTCCATGTCTCCAGGACACCCAACACACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
ENST00000584872.1
CDS CAA 90 bp CCACAAAAACTAGAGATCCCTCTCCTGCACCCTGTTCCCCTCACTTaGTGCAGTTCAGTCATCACTATCCGACAGGGTCTCGTACTGTGC +
Preference number: 6 (lower is better)
Translates to: PQKLEIPLLHPVPLT*CSSVITIRQGLVLC
Trigger: GCACAGTACGAGACCCTGTCGGATAGTGATGACTGAACTGCACAAAGTGAGGGGAACAGGGTGCAGGAGAGGGATCTCTAGTTTTTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000464381.5
ENST00000470782.5
ENST00000580617.5
CDS CAA 90 bp TCGAGTTGTCGGAAGCCGAACGCCTTCAGGGAGATTAGTTATCACTaGATGTGGAGCAGGCTGAAGGACTTCCCACTCTCTGTTTGGACT +
Preference number: 6 (lower is better)
Translates to: SSCRKPNAFREISYH*MWSRLKDFPLSVWT
Trigger: AGTCCAAACAGAGAGTGGGAAGTCCTTCAGCCTGCTCCACATCAAGTGATAACTAATCTCCCTGAAGGCGTTCGGCTTCCGACAACTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS CAA 90 bp TCTCTTGGAGAAAGCCTACACGGTGAGGCTGACCTTGCTGCAGTATaGTGCATCTGTGCTTCCTGTTCTAGAGCACGTTTGACCTCAGCA +
Preference number: 6 (lower is better)
Translates to: SLGESLHGEADLAAV*CICASCSRARLTSA
Trigger: TGCTGAGGTCAAACGTGCTCTAGAACAGGAAGCACAGATGCACAATACTGCAGCAAGGTCAGCCTCACCGTGTAGGCTTTCTCCAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436068.1
CDS CAA 90 bp CAGGCCTTCCCCTGGATTTGTCCACAAGATTTTCTGGAGAGACCCTaGAACCTGGTCTTTGATGATGGACAGACTGAGCCTGGGATTCTG +
Preference number: 6 (lower is better)
Translates to: QAFPWICPQDFLERP*NLVFDDGQTEPGIL
Trigger: CAGAATCCCAGGCTCAGTCTGTCCATCATCAAAGACCAGGTTCAAGGGTCTCTCCAGAAAATCTTGTGGACAAATCCAGGGGAAGGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579606.1
CDS TCA 72 bp CCTTTCTTGAGGCCTGTCAGAACCTGGGTGAAATTCTaGAAGCAAGGAAGGTCGCCTTCGAAGCTGTTGCTG +
Preference number: 6 (lower is better)
Translates to: PFLRPVRTWVKF*KQGRSPSKLLL
Trigger: CAGCAACAGCTTCGAAGGCGACCTTCCTTGCTTTCAGAATTTCACCCAGGTTCTGACAGGCCTCAAGAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000411510.5
ENST00000430577.2
ENST00000436828.5
ENST00000582357.5
ENST00000585296.1
CDS TCA 72 bp TCTGACTGGGGCTCGGGCCTTTGGGCATTTATTTGCTaGGCTACCACCAAATCTTCATCTCTAGGTTCCACC +
Preference number: 6 (lower is better)
Translates to: SDWGSGLWAFIC*ATTKSSSLGST
Trigger: GGTGGAACCTAGAGATGAAGATTTGGTGGTAGCTCAGCAAATAAATGCCCAAAGGCCCGAGCCCCAGTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS TCA 72 bp GAGCCAGACAATACAGTCCTTTCTTTGAGGTCAGAATaGGGACTCCCCCTGGGTAATGCTCGGCATATCAGC +
Preference number: 6 (lower is better)
Translates to: EPDNTVLSLRSE*GLPLGNARHIS
Trigger: GCTGATATGCCGAGCATTACCCAGGGGGAGTCCTCATTCTGACCTCAAAGAAAGGACTGTATTGTCTGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
CDS GCA 72 bp GGACATGGTGTTTTGATAACTCACAGGGGTCCTCCGTaGACTGGTGTCATCATAAATCCCAGGGCTCAGTTG +
Preference number: 6 (lower is better)
Translates to: GHGVLITHRGPP*TGVIINPRAQL
Trigger: CAACTGAGCCCTGGGATTTATGATGACACCAGTGCACGGAGGACCCCTGTGAGTTATCAAAACACCATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
CDS CCA 72 bp CCGAACGCCTTCAGGGAGATTAGTTATCACTTGATGTaGAGCAGGCTGAAGGACTTCCCACTCTCTGTTTGG +
Preference number: 6 (lower is better)
Translates to: PNAFREISYHLM*SRLKDFPLSVW
Trigger: CCAAACAGAGAGTGGGAAGTCCTTCAGCCTGCTCCACATCAAGTGATAACTAATCTCCCTGAAGGCGTTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS CCA 72 bp CTTCCTCTCTGCCTTTCTCAGGACTGCTGTCTTCAATaGGCATTCTCGAAATGGACCCCTTCACCAAAGCCT +
Preference number: 6 (lower is better)
Translates to: LPLCLSQDCCLQ*AFSKWTPSPKP
Trigger: AGGCTTTGGTGAAGGGGTCCATTTCGAGAATGCCCATTGAAGACAGCAGTCCTGAGAAAGGCAGAGAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
CDS CCA 72 bp CAGAAGTTCTGTTCATCATGGGTGAGCCTCTGGACATaGTGTTTTGATAACTCACAGGGGTCCTCCGTGCAC +
Preference number: 6 (lower is better)
Translates to: QKFCSSWVSLWT*CFDNSQGSSVH
Trigger: GTGCACGGAGGACCCCTGTGAGTTATCAAAACACCATGTCCAGAGGCTCACCCATGATGAACAGAACTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
CDS CCA 72 bp CCGCATGTCCTTCAACATCAGACACCATCTCACCCTTaGCTCCTTAGTCCAGGTGAAACCTCAAGGGTTTTC +
Preference number: 6 (lower is better)
Translates to: PHVLQHQTPSHP*LLSPGETSRVF
Trigger: GAAAACCCTTGAGGTTTCACCTGGACTAAGGAGCCAAGGGTGAGATGGTGTCTGATGTTGAAGGACATGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583234.1
CDS CCA 72 bp GGGCTCGTAGGGCTCCGAAGAGACGTGACTCCTCTCTaGGGATTTTCCAGGCCTACTATTGTAATATGTGAA +
Preference number: 6 (lower is better)
Translates to: GLVGLRRDVTPL*GFSRPTIVICE
Trigger: TTCACATATTACAATAGTAGGCCTGGAAAATCCCCAGAGAGGAGTCACGTCTCTTCGGAGCCCTACGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583234.1
CDS CAA 72 bp GAAAGCCTACACGGTGAGGCTGACCTTGCTGCAGTATaGTGCATCTGTGCTTCCTGTTCTAGAGCACGTTTG +
Preference number: 6 (lower is better)
Translates to: ESLHGEADLAAV*CICASCSRARL
Trigger: CAAACGTGCTCTAGAACAGGAAGCACAGATGCACAATACTGCAGCAAGGTCAGCCTCACCGTGTAGGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436068.1
CDS CAA 90 bp CATTCACCTGGGTCTCCACACTTTCATCTTCAGCTGGTTTTGTACTaGGAACTGCTAAGGAGGGAGATGTACTGGGTGCAGTTTCCGTGG +
Preference number: 6 (lower is better)
Translates to: HSPGSPHFHLQLVLY*ELLRREMYWVQFPW
Trigger: CCACGGAAACTGCACCCAGTACATCTCCCTCCTTAGCAGTTCCAAGTACAAAACCAGCTGAAGATGAAAGTGTGGAGACCCAGGTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS CAA 90 bp GCCTACTTCCCCTGGATTTGTCCACAAGATTTTCTGGAGAGACCCTaGAACCTGGTCTTTGATGATGGACAGACTGAGCCTGGGATTCTG +
Preference number: 6 (lower is better)
Translates to: AYFPWICPQDFLERP*NLVFDDGQTEPGIL
Trigger: CAGAATCCCAGGCTCAGTCTGTCCATCATCAAAGACCAGGTTCAAGGGTCTCTCCAGAAAATCTTGTGGACAAATCCAGGGGAAGTAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000464381.5
ENST00000470782.5
ENST00000580554.1
CDS CAA 90 bp AACAAACATGCATTGCCCCATCAGCCCACTGAATACACACAGCACTaGGCAAGTGACCTAGAACAATACCAGGACCCACCACACAGAGAC +
Preference number: 6 (lower is better)
Translates to: NKHALPHQPTEYTQH*ASDLEQYQDPPHRD
Trigger: GTCTCTGTGTGGTGGGTCCTGGTATTGTTCTAGGTCACTTGCCAAGTGCTGTGTGTATTCAGTGGGCTGATGGGGCAATGCATGTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580617.5
CDS TCA 72 bp GCTGATCTACATCCATCTGCTCTGCTGTCTCAGCACTaGTGCTGTCATTCACCTGGGTCTCCACACTTTCAT +
Preference number: 6 (lower is better)
Translates to: ADLHPSALLSQH*CCHSPGSPHFH
Trigger: ATGAAAGTGTGGAGACCCAGGTGAATGACAGCATCAGTGCTGAGACAGCAGAGCAGATGGATGTAGATCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS TCA 72 bp ATTCTGTCCATGGGAGGAGTGCTTGTTCCCCCTGGATaGGGCACTAAAATTGTTGGAGGCATATTGGTCAGG +
Preference number: 6 (lower is better)
Translates to: ILSMGGVLVPPG*GTKIVGGILVR
Trigger: CCTGACCAATATGCCTCCAACAATTTTAGTGCCTCATCCAGGGGGAACAAGCACTCCTCCCATGGACAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
ENST00000584872.1
CDS CCA 72 bp TTTAATGTGTCGCTGGTAGAGAGCATAGCCGCTCACTaGGGTTCCAATTGGTATGTTACATGGGGTGCAGGA +
Preference number: 6 (lower is better)
Translates to: FNVSLVESIAAH*GSNWYVTWGAG
Trigger: TCCTGCACCCCATGTAACATACCAATTGGAACCCCAGTGAGCGGCTATGCTCTCTACCAGCGACACATTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS CCA 72 bp ATGTGGAGCAGGCTGAAGGACTTCCCACTCTCTGTTTaGACTCTTGGATGTGCCACATGGACTTGTAGAACT +
Preference number: 6 (lower is better)
Translates to: MWSRLKDFPLSV*TLGCATWTCRT
Trigger: AGTTCTACAAGTCCATGTGGCACATCCAAGAGTCCAAACAGAGAGTGGGAAGTCCTTCAGCCTGCTCCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS CCA 72 bp TGGTGTTTTGATAACTCACAGGGGTCCTCCGTGCACTaGTGTCATCATAAATCCCAGGGCTCAGTTGTGCTT +
Preference number: 6 (lower is better)
Translates to: WCFDNSQGSSVH*CHHKSQGSVVL
Trigger: AAGCACAACTGAGCCCTGGGATTTATGATGACACCAGTGCACGGAGGACCCCTGTGAGTTATCAAAACACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
CDS CCA 72 bp TCATGCTTACTCTCTTTTGTTTTGGACACATCCATCTaGGGTGCAGAAGCTGCAGCATCCACAAGAGCAGCC +
Preference number: 6 (lower is better)
Translates to: SCLLSFVLDTSI*GAEAAASTRAA
Trigger: GGCTGCTCTTGTGGATGCTGCAGCTTCTGCACCCCAGATGGATGTGTCCAAAACAAAAGAGAGTAAGCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
CDS CAA 72 bp GGGTCTCCACACTTTCATCTTCAGCTGGTTTTGTACTaGGAACTGCTAAGGAGGGAGATGTACTGGGTGCAG +
Preference number: 6 (lower is better)
Translates to: GSPHFHLQLVLY*ELLRREMYWVQ
Trigger: CTGCACCCAGTACATCTCCCTCCTTAGCAGTTCCAAGTACAAAACCAGCTGAAGATGAAAGTGTGGAGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS CAA 72 bp TTTGCTGGTTGGAGTTCCCCGAGTTATACTTCCTTCTaGTATGGCTCCTGCGGTACCTCTGACTACACCTTC +
Preference number: 6 (lower is better)
Translates to: FAGWSSPSYTSF*YGSCGTSDYTF
Trigger: GAAGGTGTAGTCAGAGGTACCGCAGGAGCCATACAAGAAGGAAGTATAACTCGGGGAACTCCAACCAGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
CDS CAA 72 bp GAGCCCCGTAGGGATGGAATGCTCTCCACTGAAATTTaGCTGGTTGGAGTTCCCCGAGTTATACTTCCTTCT +
Preference number: 6 (lower is better)
Translates to: EPRRDGMLSTEI*LVGVPRVILPS
Trigger: AGAAGGAAGTATAACTCGGGGAACTCCAACCAGCAAAATTTCAGTGGAGAGCATTCCATCCCTACGGGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
CDS CAA 72 bp GGCACAATTTCCAGCGGAGGCATTCCACGGGATAGTTaGCTAGGCCCCGTGATTAAGGATTTGACATTGTGT +
Preference number: 6 (lower is better)
Translates to: GTISSGGIPRDS*LGPVIKDLTLC
Trigger: ACACAATGTCAAATCCTTAATCACGGGGCCTAGCAAACTATCCCGTGGAATGCCTCCGCTGGAAATTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
CDS CAA 90 bp TGTTCTCCATTGCGTAAAGCTGATACTGACTTGGGTAACCTGGAGTaGGTGAAAGCTGTCTCTGAAACAGGTAAGCAGCCGCTGCAGGAT +
Preference number: 6 (lower is better)
Translates to: CSPLRKADTDLGNLE*VKAVSETGKQPLQD
Trigger: ATCCTGCAGCGGCTGCTTACCTGTTTCAGAGACAGCTTTCACCAACTCCAGGTTACCCAAGTCAGTATCAGCTTTACGCAATGGAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
CDS CAA 90 bp GTGTTTCCTCGAGAAGTAGCATTTTCAGGACTGTCCTCGCTGGGCTaGACAGCTTCAACTGGTGAAGGAGAAGGAGCACTTTCTGTATCA +
Preference number: 6 (lower is better)
Translates to: VFPREVAFSGLSSLG*TASTGEGEGALSVS
Trigger: TGATACAGAAAGTGCTCCTTCTCCTTCACCAGTTGAAGCTGTCAAGCCCAGCGAGGACAGTCCTGAAAATGCTACTTCTCGAGGAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS CAA 90 bp TGTTCTCCATTGCGTAAAGCTGATACTGACTTGGGTAACCTGGAGTaGGTGAAAGCTGTCTCTGAAACAGGTAAGCAGCCGCAGGATCCA +
Preference number: 6 (lower is better)
Translates to: CSPLRKADTDLGNLE*VKAVSETGKQPQDP
Trigger: TGGATCCTGCGGCTGCTTACCTGTTTCAGAGACAGCTTTCACCAACTCCAGGTTACCCAAGTCAGTATCAGCTTTACGCAATGGAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
CDS CAA 90 bp CATACCTTCCCCTGGATTTGTCCACAAGATTTTCTGGAGAGACCCTaGAACCTGGTCTTTGATGATGGACAGACTGAGCCTGGGATTCTG +
Preference number: 6 (lower is better)
Translates to: HTFPWICPQDFLERP*NLVFDDGQTEPGIL
Trigger: CAGAATCCCAGGCTCAGTCTGTCCATCATCAAAGACCAGGTTCAAGGGTCTCTCCAGAAAATCTTGTGGACAAATCCAGGGGAAGGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472189.1
CDS TCA 72 bp CAGGATACCATTGGTGGGATAACAGCAGCTCGATGCTaGAGCTGTGGCAGATCCAGTGGATTTGGTTTTAAC +
Preference number: 6 (lower is better)
Translates to: QDTIGGITAARC*SCGRSSGFGFN
Trigger: GTTAAAACCAAATCCACTGGATCTGCCACAGCTTCAGCATCGAGCTGCTGTTATCCCACCAATGGTATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS TCA 72 bp GACAGACTGAGCCTGGGATTCTGGGCTGTAACGGTTTaGTGTTTTAGTCCTCACAGGTGTAGATACCAAAGC +
Preference number: 6 (lower is better)
Translates to: DRLSLGFWAVTV*CFSPHRCRYQS
Trigger: GCTTTGGTATCTACACCTGTGAGGACTAAAACATCAAACCGTTACAGCCCAGAATCCCAGGCTCAGTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000464381.5
ENST00000470782.5
ENST00000472189.1
ENST00000579606.1
ENST00000580554.1
CDS TCA 72 bp CCTGGATTTGTCCACAAGATTTTCTGGAGAGACCCTTaGACCTGGTCTTTGATGATGGACAGACTGAGCCTG +
Preference number: 6 (lower is better)
Translates to: PGFVHKIFWRDP*TWSLMMDRLSL
Trigger: CAGGCTCAGTCTGTCCATCATCAAAGACCAGGTTCAAGGGTCTCTCCAGAAAATCTTGTGGACAAATCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000464381.5
ENST00000470782.5
ENST00000472189.1
ENST00000579606.1
ENST00000580554.1
CDS TCA 72 bp AGGACTGTCCTCGCTGGGCTTGACAGCTTCAACTGGTaGAGGAGAAGGAGCACTTTCTGTATCAGAACTATT +
Preference number: 6 (lower is better)
Translates to: RTVLAGLDSFNW*RRRSTFCIRTI
Trigger: AATAGTTCTGATACAGAAAGTGCTCCTTCTCCTTCACCAGTTGAAGCTGTCAAGCCCAGCGAGGACAGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS CAA 72 bp TCACCTGGGTCTCCACACTTTCATCTTCAGCTGGTTTaGTACTTGGAACTGCTAAGGAGGGAGATGTACTGG +
Preference number: 6 (lower is better)
Translates to: SPGSPHFHLQLV*YLELLRREMYW
Trigger: CCAGTACATCTCCCTCCTTAGCAGTTCCAAGTACAAAACCAGCTGAAGATGAAAGTGTGGAGACCCAGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS CAA 72 bp TTGCGTAAAGCTGATACTGACTTGGGTAACCTGGAGTaGGTGAAAGCTGTCTCTGAAACAGGTAAGCAGCCG +
Preference number: 6 (lower is better)
Translates to: LRKADTDLGNLE*VKAVSETGKQP
Trigger: CGGCTGCTTACCTGTTTCAGAGACAGCTTTCACCAACTCCAGGTTACCCAAGTCAGTATCAGCTTTACGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
ENST00000584872.1
CDS CAA 72 bp TCTAACCTGGCAGCTTCATGCTTACTCTCTTTTGTTTaGGACACATCCATCTGGGGTGCAGAAGCTGCAGCA +
Preference number: 6 (lower is better)
Translates to: SNLAASCLLSFV*DTSIWGAEAAA
Trigger: TGCTGCAGCTTCTGCACCCCAGATGGATGTGTCCAAAACAAAAGAGAGTAAGCATGAAGCTGCCAGGTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
CDS CAA 72 bp TCCCTCTGGTCCTTAGCTCTTCCTCATATCTGGATTTaGGAGGAGGCCCTTTATCTTTCCCAGCCTCAGAAT +
Preference number: 6 (lower is better)
Translates to: SLWSLALPHIWI*EEALYLSQPQN
Trigger: ATTCTGAGGCTGGGAAAGATAAAGGGCCTCCTCCAAAATCCAGATATGAGGAAGAGCTAAGGACCAGAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
CDS CAA 72 bp CCCTGGATTTGTCCACAAGATTTTCTGGAGAGACCCTaGAACCTGGTCTTTGATGATGGACAGACTGAGCCT +
Preference number: 6 (lower is better)
Translates to: PWICPQDFLERP*NLVFDDGQTEP
Trigger: AGGCTCAGTCTGTCCATCATCAAAGACCAGGTTCAAGGGTCTCTCCAGAAAATCTTGTGGACAAATCCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000464381.5
ENST00000470782.5
ENST00000472189.1
ENST00000579606.1
ENST00000580554.1
CDS CAA 90 bp TGCTGTCATTCACCTGGGTCTCCACACTTTCATCTTCAGCTGGTTTaGTACTTGGAACTGCTAAGGAGGGAGATGTACTGGGTGCAGTTT +
Preference number: 6 (lower is better)
Translates to: CCHSPGSPHFHLQLV*YLELLRREMYWVQF
Trigger: AAACTGCACCCAGTACATCTCCCTCCTTAGCAGTTCCAAGTACAAAACCAGCTGAAGATGAAAGTGTGGAGACCCAGGTGAATGACAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS CAA 90 bp ATGTTCTCTGGCACAATTTCCAGCGGAGGCATTCCACGGGATAGTTaGCTAGGCCCCGTGATTAAGGATTTGACATTGTGTTTGATGGCA +
Preference number: 6 (lower is better)
Translates to: MFSGTISSGGIPRDS*LGPVIKDLTLCLMA
Trigger: TGCCATCAAACACAATGTCAAATCCTTAATCACGGGGCCTAGCAAACTATCCCGTGGAATGCCTCCGCTGGAAATTGTGCCAGAGAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
CDS CAA 90 bp TGTTCTCCATTGCGTAAAGCTGATACTGACTTGGGTAACCTGGAGTaGGTGAAAGCTGTCTCTGAAACAGGTAAGCAGCCGCTGCTGATT +
Preference number: 6 (lower is better)
Translates to: CSPLRKADTDLGNLE*VKAVSETGKQPLLI
Trigger: AATCAGCAGCGGCTGCTTACCTGTTTCAGAGACAGCTTTCACCAACTCCAGGTTACCCAAGTCAGTATCAGCTTTACGCAATGGAGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584872.1
CDS CAA 90 bp CGCCCCATTTCTTTGATGGTGGTGATGCCATCATATGGTTTTCCTTaGGTAATGGCACCTTCAAATGCTCGTATGGGAGGACTTTCCCTT +
Preference number: 6 (lower is better)
Translates to: RPISLMVVMPSYGFP*VMAPSNARMGGLSL
Trigger: AAGGGAAAGTCCTCCCATACGAGCATTTGAAGGTGCCATTACCAAAGGAAAACCATATGATGGCATCACCACCATCAAAGAAATGGGGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
CDS CAA 90 bp AGCAGTTGGATCCAAAGGTGTGATTACACTGGTTCCATTGGTTCCTaGGAAAACACTGGGTCTCTGTTGCAACATGGTCTCCTGAGTTCT +
Preference number: 6 (lower is better)
Translates to: SSWIQRCDYTGSIGS*ENTGSLLQHGLLSS
Trigger: AGAACTCAGGAGACCATGTTGCAACAGAGACCCAGTGTTTTCCAAGGAACCAATGGAACCAGTGTAATCACACCTTTGGATCCAACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
ENST00000584872.1
CDS CCA 72 bp CCCGTAGGGATGGAATGCTCTCCACTGAAATTTTGCTaGTTGGAGTTCCCCGAGTTATACTTCCTTCTTGTA +
Preference number: 6 (lower is better)
Translates to: PVGMECSPLKFC*LEFPELYFLLV
Trigger: TACAAGAAGGAAGTATAACTCGGGGAACTCCAACCAGCAAAATTTCAGTGGAGAGCATTCCATCCCTACGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
CDS CCA 72 bp TCCAAAGGTGTGATTACACTGGTTCCATTGGTTCCTTaGAAAACACTGGGTCTCTGTTGCAACATGGTCTCC +
Preference number: 6 (lower is better)
Translates to: SKGVITLVPLVP*KTLGLCCNMVS
Trigger: GGAGACCATGTTGCAACAGAGACCCAGTGTTTTCCAAGGAACCAATGGAACCAGTGTAATCACACCTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
ENST00000584872.1
CDS CCA 72 bp AAACATCAGAAGTTCTGTTCATCATGGGTGAGCCTCTaGACATGGTGTTTTGATAACTCACAGGGGTCCTCC +
Preference number: 6 (lower is better)
Translates to: KHQKFCSSWVSL*TWCFDNSQGSS
Trigger: GGAGGACCCCTGTGAGTTATCAAAACACCATGTCCAGAGGCTCACCCATGATGAACAGAACTTCTGATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395857.7
CDS CCA 72 bp AACCAGCATATTTTACCTCTGACTACACCTTCATGTTaGGCCCTGACCAACAGACCCTCAGGTTGTGAGTTT +
Preference number: 6 (lower is better)
Translates to: NQHILPLTTPSC*ALTNRPSGCEF
Trigger: AAACTCACAACCTGAGGGTCTGTTGGTCAGGGCCCAACATGAAGGTGTAGTCAGAGGTAAAATATGCTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458113.6
CDS CAA 72 bp GCCCCTCTAACGGTGCTGATACAGGAGACTCCCTCATaGACATCCCTTGCTTTATATTTCCTTCCACTGATT +
Preference number: 6 (lower is better)
Translates to: APLTVLIQETPS*TSLALYFLPLI
Trigger: AATCAGTGGAAGGAAATATAAAGCAAGGGATGTCAATGAGGGAGTCTCCTGTATCAGCACCGTTAGAGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
CDS CAA 72 bp GCAGTTGGATCCAAAGGTGTGATTACACTGGTTCCATaGGTTCCTTGGAAAACACTGGGTCTCTGTTGCAAC +
Preference number: 6 (lower is better)
Translates to: AVGSKGVITLVP*VPWKTLGLCCN
Trigger: GTTGCAACAGAGACCCAGTGTTTTCCAAGGAACCAATGGAACCAGTGTAATCACACCTTTGGATCCAACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
ENST00000584872.1
CDS CAA 90 bp CATTTCCACTTATTTCTGAAAGGCCAATCAGGAAACAAACATGCATaGCCCCATCAGCCCACTGAATACACACAGCACTTGGCAAGTGAC +
Preference number: 6 (lower is better)
Translates to: HFHLFLKGQSGNKHA*PHQPTEYTQHLASD
Trigger: GTCACTTGCCAAGTGCTGTGTGTATTCAGTGGGCTGATGGGGCAATGCATGTTTGTTTCCTGATTGGCCTTTCAGAAATAAGTGGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580617.5
CDS TCA 72 bp TTGCCACTTGGAAAGGCTGAAGAAGTGTATAAACACTaGACAGATCTCTTCTCCACCTCCAGGGTTTTCTGC +
Preference number: 6 (lower is better)
Translates to: LPLGKAEEVYKH*TDLFSTSRVFC
Trigger: GCAGAAAACCCTGGAGGTGGAGAAGAGATCTGTTCAGTGTTTATACACTTCTTCAGCCTTTCCAAGTGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
CDS TCA 72 bp TTGCCCAGGTATAGGAGACTTAGATTTCCTGCTGTTTaGCTTGCTGATCAGCTTTGGTTTGCAAACTCCTCC +
Preference number: 6 (lower is better)
Translates to: LPRYRRLRFPAV*LADQLWFANSS
Trigger: GGAGGAGTTTGCAAACCAAAGCTGATCAGCAAGTCAAACAGCAGGAAATCTAAGTCTCCTATACCTGGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000579573.2
ENST00000580617.5
ENST00000582565.1
CDS CAA 72 bp GTAGGGATGGAATGCTCTCCACTGAAATTTTGCTGGTaGGAGTTCCCCGAGTTATACTTCCTTCTTGTATGG +
Preference number: 6 (lower is better)
Translates to: VGMECSPLKFCW*EFPELYFLLVW
Trigger: CCATACAAGAAGGAAGTATAACTCGGGGAACTCCAACCAGCAAAATTTCAGTGGAGAGCATTCCATCCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
CDS CAA 72 bp ATCCAAAGGTGTGATTACACTGGTTCCATTGGTTCCTaGGAAAACACTGGGTCTCTGTTGCAACATGGTCTC +
Preference number: 6 (lower is better)
Translates to: IQRCDYTGSIGS*ENTGSLLQHGL
Trigger: GAGACCATGTTGCAACAGAGACCCAGTGTTTTCCAAGGAACCAATGGAACCAGTGTAATCACACCTTTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
ENST00000584872.1
CDS CAA 72 bp TTTCTTCTAACCTGGCAGCTTCATGCTTACTCTCTTTaGTTTTGGACACATCCATCTGGGGTGCAGAAGCTG +
Preference number: 6 (lower is better)
Translates to: FLLTWQLHAYSL*FWTHPSGVQKL
Trigger: CAGCTTCTGCACCCCAGATGGATGTGTCCAAAACAAAAGAGAGTAAGCATGAAGCTGCCAGGTTAGAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
CDS CAA 90 bp AGATTGTCTGTCTTGTGTTCTCCATTGCGTAAAGCTGATACTGACTaGGGTAACCTGGAGTTGGTGAAAGCTGTCTCTGAAACAGGTAAG +
Preference number: 6 (lower is better)
Translates to: RLSVLCSPLRKADTD*GNLELVKAVSETGK
Trigger: CTTACCTGTTTCAGAGACAGCTTTCACCAACTCCAGGTTACCCAAGTCAGTATCAGCTTTACGCAATGGAGAACACAAGACAGACAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
ENST00000584872.1
CDS CAA 90 bp CAGCCTCAGAATAAACTACTGAAGAATGAGGCTGGGGCTTGCCACTaGGAAAGGCTGAAGAAGTGTATAAACACTGAACAGATCTCTTCT +
Preference number: 6 (lower is better)
Translates to: QPQNKLLKNEAGACH*ERLKKCINTEQISS
Trigger: AGAAGAGATCTGTTCAGTGTTTATACACTTCTTCAGCCTTTCCAAGTGGCAAGCCCCAGCCTCATTCTTCAGTAGTTTATTCTGAGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
CDS CAA 90 bp GGTGATAGCTCTATCTACCTACCTTCCCACTCTCTGTTTGGACTCTaGGATGTGCCACATGGACTTGTAGAACTTCTACATTCCAAATCT +
Preference number: 6 (lower is better)
Translates to: GDSSIYLPSHSLFGL*DVPHGLVELLHSKS
Trigger: AGATTTGGAATGTAGAAGTTCTACAAGTCCATGTGGCACATCCAAGAGTCCAAACAGAGAGTGGGAAGGTAGGTAGATAGAGCTATCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395848.5
CDS CAA 90 bp CTCTTCTTTTTCTTCTACTTTTTCTTCTTGCGAGGGTCGAGCAATTaGCTGCTGGTTTCTGCCTCTGCGTTTCCCATAATTCCTTCTGAC +
Preference number: 6 (lower is better)
Translates to: LFFFFYFFFLRGSSN*LLVSASAFPIIPSD
Trigger: GTCAGAAGGAATTATGGGAAACGCAGAGGCAGAAACCAGCAGCAAATTGCTCGACCCTCGCAAGAAGAAAAAGTAGAAGAAAAAGAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000411510.5
ENST00000582357.5
CDS TCA 72 bp TATTGTGCATCTGTGCTTCCTGTTCTAGAGCACGTTTaGCCTCAGCATAAGGCATATAGGCGACTGATTTTC +
Preference number: 6 (lower is better)
Translates to: YCASVLPVLEHV*PQHKAYRRLIF
Trigger: GAAAATCAGTCGCCTATATGCCTTATGCTGAGGTCAAACGTGCTCTAGAACAGGAAGCACAGATGCACAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436068.1
CDS CCA 72 bp GGTATTATCACCTTCAACTTTAGATGCATGGTTTTCTaGCACCCTCACTTCAACGTCCACAGAGTCAGCTTT +
Preference number: 6 (lower is better)
Translates to: GIITFNFRCMVF*HPHFNVHRVSF
Trigger: AAAGCTGACTCTGTGGACGTTGAAGTGAGGGTGCCAGAAAACCATGCATCTAAAGTTGAAGGTGATAATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS CAA 72 bp TCTTTGATGGTGGTGATGCCATCATATGGTTTTCCTTaGGTAATGGCACCTTCAAATGCTCGTATGGGAGGA +
Preference number: 6 (lower is better)
Translates to: SLMVVMPSYGFP*VMAPSNARMGG
Trigger: TCCTCCCATACGAGCATTTGAAGGTGCCATTACCAAAGGAAAACCATATGATGGCATCACCACCATCAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
CDS CAA 72 bp CCAGGTATAGGAGACTTAGATTTCCTGCTGTTTGACTaGCTGATCAGCTTTGGTTTGCAAACTCCTCCTGAA +
Preference number: 6 (lower is better)
Translates to: PGIGDLDFLLFD*LISFGLQTPPE
Trigger: TTCAGGAGGAGTTTGCAAACCAAAGCTGATCAGCAAGTCAAACAGCAGGAAATCTAAGTCTCCTATACCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000579573.2
ENST00000580617.5
ENST00000582565.1
CDS CAA 72 bp TTCTTCTACTTTTTCTTCTTGCGAGGGTCGAGCAATTaGCTGCTGGTTTCTGCCTCTGCGTTTCCCATAATT +
Preference number: 6 (lower is better)
Translates to: FFYFFFLRGSSN*LLVSASAFPII
Trigger: AATTATGGGAAACGCAGAGGCAGAAACCAGCAGCAAATTGCTCGACCCTCGCAAGAAGAAAAAGTAGAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411510.5
ENST00000582357.5
CDS CAA 90 bp TCTCTAGGTTCCACCTTCTCACTGGCTCTATCCAAGTCTCTTTCTTaGGTATTATCACCTTCAACTTTAGATGCATGGTTTTCTGGCACC +
Preference number: 6 (lower is better)
Translates to: SLGSTFSLALSKSLS*VLSPSTLDAWFSGT
Trigger: GGTGCCAGAAAACCATGCATCTAAAGTTGAAGGTGATAATACCAAAGAAAGAGACTTGGATAGAGCCAGTGAGAAGGTGGAACCTAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS TCA 72 bp GTTAGAAGAAACATCAGAAGTTCTGTTCATCATGGGTaGGCCTCTGGACATGGTGTTTTGATAACTCACAGG +
Preference number: 6 (lower is better)
Translates to: VRRNIRSSVHHG*ASGHGVLITHR
Trigger: CCTGTGAGTTATCAAAACACCATGTCCAGAGGCTCACCCATGATGAACAGAACTTCTGATGTTTCTTCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395857.7
CDS TCA 72 bp TCCCTCTGGGTAGGGGTCAGTGTCGATTTCCTTTCATaGTTGGTAGACTTGTTAGAAGAAACATCAGAAGTT +
Preference number: 6 (lower is better)
Translates to: SLWVGVSVDFLS*LVDLLEETSEV
Trigger: AACTTCTGATGTTTCTTCTAACAAGTCTACCAATCATGAAAGGAAATCGACACTGACCCCTACCCAGAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395857.7
CDS GCA 72 bp GCTTTATCCTCTTCTTTTTCTTCTACTTTTTCTTCTTaGGAGGGTCGAGCAATTTGCTGCTGGTTTCTGCCT +
Preference number: 6 (lower is better)
Translates to: ALSSSFSSTFSS*EGRAICCWFLP
Trigger: AGGCAGAAACCAGCAGCAAATTGCTCGACCCTCGCAAGAAGAAAAAGTAGAAGAAAAAGAAGAGGATAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000411510.5
ENST00000582357.5
CDS CCA 72 bp CTTTCTTTGGTATTATCACCTTCAACTTTAGATGCATaGTTTTCTGGCACCCTCACTTCAACGTCCACAGAG +
Preference number: 6 (lower is better)
Translates to: LSLVLSPSTLDA*FSGTLTSTSTE
Trigger: CTCTGTGGACGTTGAAGTGAGGGTGCCAGAAAACCATGCATCTAAAGTTGAAGGTGATAATACCAAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS CAA 72 bp AATAAACTACTGAAGAATGAGGCTGGGGCTTGCCACTaGGAAAGGCTGAAGAAGTGTATAAACACTGAACAG +
Preference number: 6 (lower is better)
Translates to: NKLLKNEAGACH*ERLKKCINTEQ
Trigger: CTGTTCAGTGTTTATACACTTCTTCAGCCTTTCCAAGTGGCAAGCCCCAGCCTCATTCTTCAGTAGTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395857.7
ENST00000458113.6
ENST00000470782.5
CDS CAA 72 bp AGAAGTAGGAGGCTGCTGGGGAGTCTGCGAGGAAACTaGATTTCTAGCAAAATCTTGTGTGATAATTTGACA +
Preference number: 6 (lower is better)
Translates to: RSRRLLGSLRGN*ISSKILCDNLT
Trigger: TGTCAAATTATCACACAAGATTTTGCTAGAAATCAAGTTTCCTCGCAGACTCCCCAGCAGCCTCCTACTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000268712.8
ENST00000395849.6
ENST00000395851.5
ENST00000395857.7
ENST00000458113.6
ENST00000464381.5
ENST00000470782.5
ENST00000472189.1
CDS CAA 72 bp TGCTTTATCCTCTTCTTTTTCTTCTACTTTTTCTTCTaGCGAGGGTCGAGCAATTTGCTGCTGGTTTCTGCC +
Preference number: 6 (lower is better)
Translates to: CFILFFFFYFFF*RGSSNLLLVSA
Trigger: GGCAGAAACCAGCAGCAAATTGCTCGACCCTCGCAAGAAGAAAAAGTAGAAGAAAAAGAAGAGGATAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000411510.5
ENST00000582357.5
CDS CAA 72 bp TCCACCTTCTCACTGGCTCTATCCAAGTCTCTTTCTTaGGTATTATCACCTTCAACTTTAGATGCATGGTTT +
Preference number: 6 (lower is better)
Translates to: STFSLALSKSLS*VLSPSTLDAWF
Trigger: AAACCATGCATCTAAAGTTGAAGGTGATAATACCAAAGAAAGAGACTTGGATAGAGCCAGTGAGAAGGTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268712.8
ENST00000395848.5
ENST00000395851.5
ENST00000395857.7
CDS CAA 72 bp TTTGCTGGTTGGAGTTCCCCGAGTTATACTTCCTTCTaGTATGGCTCCTGCGGTACTTTAATAAATTTATTG +
Preference number: 6 (lower is better)
Translates to: FAGWSSPSYTSF*YGSCGTLINLL
Trigger: CAATAAATTTATTAAAGTACCGCAGGAGCCATACAAGAAGGAAGTATAACTCGGGGAACTCCAACCAGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458113.6