RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NCOA7 (Homo sapiens)

Ensembl gene IDs: ENSG00000111912

Ensembl transcript IDs: ENST00000229634.13, ENST00000368357.7, ENST00000392477.7, ENST00000417494.5, ENST00000419660.1, ENST00000428318.1, ENST00000433571.2, ENST00000438495.6, ENST00000444128.2, ENST00000453302.5, ENST00000487635.1

Found 539 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCTACATGGACCTTCCAGAATCTTTCTGCAATGTGATCATGCTCTaGGATGATGGCAGAAAGGAAGCATTGGGGTGGGATGAGGCAGGC +
Preference number: 1 (lower is better)
Translates to: LYMDLPESFCNVIML*DDGRKEALGWDEAG
Trigger: GCCTGCCTCATCCCACCCCAATGCTTCCTTTCTGCCATCATCTCAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTCCATGTAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR TCA 90 bp GGAGGGTGGCTACAGGGAATGAAGAGGGAGTTTCCAGGGCAGCAGTaGAAACATGAGCTCTGGACCTTGTTTAGTCTTGGATATTTCACC +
Preference number: 1 (lower is better)
Translates to: GGWLQGMKREFPGQQ*KHELWTLFSLGYFT
Trigger: GGTGAAATATCCAAGACTAAACAAGGTCCAGAGCTCATGTTTTCACTGCTGCCCTGGAAACTCCCTCTTCATTCCCTGTAGCCACCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392477.7
3UTR TCA 90 bp CAATGTCTGCCCTCTACATGGACCTTCCAGAATCTTTCTGCAATGTaGTCATGCTCTGAGATGATGGCAGAAAGGAAGCATTGGGGTGGG +
Preference number: 1 (lower is better)
Translates to: QCLPSTWTFQNLSAM*SCSEMMAERKHWGG
Trigger: CCCACCCCAATGCTTCCTTTCTGCCATCATCTCAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTCCATGTAGAGGGCAGACATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR CCA 90 bp ATATGGACTTATGAACTGAGGAATTATGAAGCAATGAAGACTGCTTaGGGTCTTCATCTAGCCCAACATCTAGGGGCTAGGTGTCAGGAT +
Preference number: 1 (lower is better)
Translates to: IWTYELRNYEAMKTA*GLHLAQHLGARCQD
Trigger: ATCCTGACACCTAGCCCCTAGATGTTGGGCTAGATGAAGACCCCAAGCAGTCTTCATTGCTTCATAATTCCTCAGTTCATAAGTCCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392477.7
3UTR CCA 90 bp CTGAAGAAACATTTGGTTGCCTCCTCCCACCCAAGTCCTTTGATATaGACTTATGAACTGAGGAATTATGAAGCAATGAAGACTGCTTGG +
Preference number: 1 (lower is better)
Translates to: LKKHLVASSHPSPLI*TYELRNYEAMKTAW
Trigger: CCAAGCAGTCTTCATTGCTTCATAATTCCTCAGTTCATAAGTCCATATCAAAGGACTTGGGTGGGAGGAGGCAACCAAATGTTTCTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392477.7
3UTR CCA 90 bp TCCCTCCCTCAACATGTGGGGATTATAATTCCAATGAGATGTTGGTaGGGACACACAGCCAAACCATATCAATGTGTCTCTAAAACTTTA +
Preference number: 1 (lower is better)
Translates to: SLPQHVGIIIPMRCW*GHTAKPYQCVSKTL
Trigger: TAAAGTTTTAGAGACACATTGATATGGTTTGGCTGTGTGTCCCCACCAACATCTCATTGGAATTATAATCCCCACATGTTGAGGGAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392477.7
3UTR-3UTR CCA 90 bp TCACATGGCTGGGTAGGCGTCAGGAAATTTACAATCATGGCAGAAGGCAAAGGGGGGGTTTCACCATGTTaGCCAGACTGGTCTCAAACT +
Preference number: 2 (lower is better)
Translates to: SHGWVGVRKFTIMAEGKGGVSPC*PDWSQT
Trigger: AGTTTGAGACCAGTCTGGCCAACATGGTGAAACCCC...CCCTTTGCCTTCTGCCATGATTGTAAATTTCCTGACGCCTACCCAGCCATGTGA
50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000392477.7
3UTR-3UTR CCA 90 bp GTTTCACATGGCTGGGTAGGCGTCAGGAAATTTACAATCATGGCAGAAGGCAAAAGTGCAGGATGTCTCTaGTGGCTTGTAGCACGGGGA +
Preference number: 2 (lower is better)
Translates to: VSHGWVGVRKFTIMAEGKSAGCL*WLVARG
Trigger: TCCCCGTGCTACAAGCCACCAGAGACATCCTGCACT...TTTGCCTTCTGCCATGATTGTAAATTTCCTGACGCCTACCCAGCCATGTGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392477.7
3UTR-3UTR TCA 90 bp GAATGGACAATACTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACAACTTGTGACCTTGAGTaGTCCACCTGCCTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: EWTILFYIENTASGYALTTCDLE*STCLGL
Trigger: GAGGCCGAGGCAGGTGGATCACTCAAGGTCACAAGT...TGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAGTATTGTCCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR-3UTR CCA 90 bp GAATGGACAATACTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACAAAGGAAGCATTGGGGTaGGATGAGGCAGGCTGGGCT +
Preference number: 2 (lower is better)
Translates to: EWTILFYIENTASGYALTKEALG*DEAGWA
Trigger: AGCCCAGCCTGCCTCATCCCACCCCAATGCTTCCTT...TGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAGTATTGTCCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR-3UTR TCA 90 bp ATTAAGGGAAGACATACTTATAATAGTGCAGGATGTCTCTGGTGGCTTGTAGCATTTCCAGGGCAGCAGTaGAAACATGAGCTCTGGACC +
Preference number: 2 (lower is better)
Translates to: IKGRHTYNSAGCLWWLVAFPGQQ*KHELWT
Trigger: GGTCCAGAGCTCATGTTTTCACTGCTGCCCTGGAAA...TGCTACAAGCCACCAGAGACATCCTGCACTATTATAAGTATGTCTTCCCTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392477.7
3UTR-3UTR CCA 90 bp TGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTAAGGAAGCATTGGGGTaGGATGAGGCAGGCTGGGCT +
Preference number: 2 (lower is better)
Translates to: WRKWEYKVFSTTWILSFFKEALG*DEAGWA
Trigger: AGCCCAGCCTGCCTCATCCCACCCCAATGCTTCCTT...AAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR-3UTR CCA 90 bp GAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTAAGGAAGCATTGGGGTaGGATGAGGCAGGCTGGGCT +
Preference number: 2 (lower is better)
Translates to: EEVGVQSLFNNLDFKFLSKEALG*DEAGWA
Trigger: AGCCCAGCCTGCCTCATCCCACCCCAATGCTTCCTT...AGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR-3UTR CCA 90 bp TCTGGATATGCTCTCACAATTATAGTATCATGGACTAAACTAGGTCAGAGTGAAAAGGAAGCATTGGGGTaGGATGAGGCAGGCTGGGCT +
Preference number: 2 (lower is better)
Translates to: SGYALTIIVSWTKLGQSEKEALG*DEAGWA
Trigger: AGCCCAGCCTGCCTCATCCCACCCCAATGCTTCCTT...TTCACTCTGACCTAGTTTAGTCCATGATACTATAATTGTGAGAGCATATCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR-3UTR CCA 90 bp AGGATGTCTCTGGTGGCTTGTAGCACGGGGATGCATCTAATCATTTTCAGTAGACTGACAGGAGGCCACTaGACAATTTGTTCTCTTTCA +
Preference number: 2 (lower is better)
Translates to: RMSLVACSTGMHLIIFSRLTGGH*TICSLS
Trigger: TGAAAGAGAACAAATTGTCCAGTGGCCTCCTGTCAG...TCTACTGAAAATGATTAGATGCATCCCCGTGCTACAAGCCACCAGAGACATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392477.7
3UTR-3UTR GCA 90 bp GAATGGACAATACTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACATTCAAGCAATTCTCCTaGCTCAGCCTCCCGAGTAGG +
Preference number: 2 (lower is better)
Translates to: EWTILFYIENTASGYALTFKQFS*LSLPSR
Trigger: CCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAA...TGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAGTATTGTCCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR-3UTR CCA 90 bp AGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTAAGGAAGCATTGGGGTaGGATGAGGCAGGCTGGGCT +
Preference number: 2 (lower is better)
Translates to: RKWEYKVFSTTWILSFFLKEALG*DEAGWA
Trigger: AGCCCAGCCTGCCTCATCCCACCCCAATGCTTCCTT...AAGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR-3UTR CCA 90 bp TCCTCCCACCCAAGTCCTTTGATATGGACTTATGAACTGAGGAATTATGAAGCACCATGTTGGCCAGACTaGTCTCAAACTTGTGACCTT +
Preference number: 2 (lower is better)
Translates to: SSHPSPLIWTYELRNYEAPCWPD*SQTCDL
Trigger: AAGGTCACAAGTTTGAGACCAGTCTGGCCAACATGG...TGCTTCATAATTCCTCAGTTCATAAGTCCATATCAAAGGACTTGGGTGGGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392477.7
3UTR-3UTR TCA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTCACACCTCCAGATCCTaGACTATGAAGTCTTCCTTT +
Preference number: 2 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFHTSRS*TMKSSF
Trigger: AAAGGAAGACTTCATAGTTCAGGATCTGGAGGTGTG...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444128.2
3UTR-3UTR GCA 90 bp CTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACAATTATAGTATCATTCAAGCAATTCTCCTaGCTCAGCCTCCCGAGTAGG +
Preference number: 2 (lower is better)
Translates to: LFYIENTASGYALTIIVSFKQFS*LSLPSR
Trigger: CCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAA...TGATACTATAATTGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR-3UTR CCA 90 bp GAATGGACAATACTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACACCATGTTGGCCAGACTaGTCTCAAACTTGTGACCTT +
Preference number: 2 (lower is better)
Translates to: EWTILFYIENTASGYALTPCWPD*SQTCDL
Trigger: AAGGTCACAAGTTTGAGACCAGTCTGGCCAACATGG...TGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAGTATTGTCCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR-3UTR CCA 90 bp GTTTCACATGGCTGGGTAGGCGTCAGGAAATTTACAATCATGGCAGAAGGCAAACCAAGTCCTTTGATATaGACTTATGAACTGAGGAAT +
Preference number: 2 (lower is better)
Translates to: VSHGWVGVRKFTIMAEGKPSPLI*TYELRN
Trigger: ATTCCTCAGTTCATAAGTCCATATCAAAGGACTTGG...TTTGCCTTCTGCCATGATTGTAAATTTCCTGACGCCTACCCAGCCATGTGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392477.7
3UTR-3UTR TCA 90 bp GAATGGACAATACTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACAGATCATGCTCTGAGATaGTGGCAGAAAGGAAGCATT +
Preference number: 2 (lower is better)
Translates to: EWTILFYIENTASGYALTDHALR*WQKGSI
Trigger: AATGCTTCCTTTCTGCCATCATCTCAGAGCATGATC...TGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAGTATTGTCCATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR-3UTR TCA 90 bp CTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACAATTATAGTATCAGTAGGAGAACTTGAGTaGAACGTACACCCAGGCTAC +
Preference number: 2 (lower is better)
Translates to: LFYIENTASGYALTIIVSVGELE*NVHPGY
Trigger: GTAGCCTGGGTGTACGTTTCACTCAAGTTCTCCTAC...TGATACTATAATTGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR-3UTR TCA 90 bp TCTGGATATGCTCTCACAATTATAGTATCATGGACTAAACTAGGTCAGAGTGAAACGAGCAGGTTAAGGTaGAACTGCCAGTATGCTGTT +
Preference number: 2 (lower is better)
Translates to: SGYALTIIVSWTKLGQSETSRLR*NCQYAV
Trigger: AACAGCATACTGGCAGTTTCACCTTAACCTGCTCGT...TTCACTCTGACCTAGTTTAGTCCATGATACTATAATTGTGAGAGCATATCCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR-3UTR GCA 90 bp TGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTTCTTTCTTCAATGTCTaGCCTCTACATGGACCTTCC +
Preference number: 2 (lower is better)
Translates to: CMDLEEVGVQSLFNNLDFSFFNV*PLHGPS
Trigger: GGAAGGTCCATGTAGAGGGCAGACATTGAAGAAAGA...AAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR-3UTR GCA 90 bp GTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTATCTTTCTTCAATGTCTaGCCTCTACATGGACCTTCC +
Preference number: 2 (lower is better)
Translates to: VWIWRKWEYKVFSTTWILSFFNV*PLHGPS
Trigger: GGAAGGTCCATGTAGAGGGCAGACATTGAAGAAAGA...TAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR-3UTR GCA 90 bp CATATATCTATAAACACTCTGATTCCTCACTGTATGGATTTGGAGGAAGTGGGATCTTTCTTCAATGTCTaGCCTCTACATGGACCTTCC +
Preference number: 2 (lower is better)
Translates to: HISINTLIPHCMDLEEVGSFFNV*PLHGPS
Trigger: GGAAGGTCCATGTAGAGGGCAGACATTGAAGAAAGA...TCCCACTTCCTCCAAATCCATACAGTGAGGAATCAGAGTGTTTATAGATATATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR-3UTR GCA 90 bp CTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACAATTATAGTATCATTACCCAGGATAGAGTaGAGTGGCACGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: LFYIENTASGYALTIIVSLPRIE*SGTILA
Trigger: AGCCAAGATCGTGCCACTGCACTCTATCCTGGGTAA...TGATACTATAATTGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR-3UTR TCA 90 bp TGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTGATCATGCTCTGAGATaGTGGCAGAAAGGAAGCATT +
Preference number: 2 (lower is better)
Translates to: WRKWEYKVFSTTWILSFFDHALR*WQKGSI
Trigger: AATGCTTCCTTTCTGCCATCATCTCAGAGCATGATC...AAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR-3UTR TCA 90 bp GTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAATGTGATCATGCTCTaGGATGATGGCAGAAAGGAA +
Preference number: 2 (lower is better)
Translates to: VWIWRKWEYKVFSTTWILNVIML*DDGRKE
Trigger: TTCCTTTCTGCCATCATCTCAGAGCATGATCACATT...TAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR-3UTR CCA 90 bp CTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACAATTATAGTATCACCATGTTGGCCAGACTaGTCTCAAACTTGTGACCTT +
Preference number: 2 (lower is better)
Translates to: LFYIENTASGYALTIIVSPCWPD*SQTCDL
Trigger: AAGGTCACAAGTTTGAGACCAGTCTGGCCAACATGG...TGATACTATAATTGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR-3UTR TCA 90 bp ATACAGATATATAGATATATGCTGCTTAAGACCTATCACCCTAAACAATCAGGGGATCATGCTCTGAGATaGTGGCAGAAAGGAAGCATT +
Preference number: 2 (lower is better)
Translates to: IQIYRYMLLKTYHPKQSGDHALR*WQKGSI
Trigger: AATGCTTCCTTTCTGCCATCATCTCAGAGCATGATC...CCCTGATTGTTTAGGGTGATAGGTCTTAAGCAGCATATATCTATATATCTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR-3UTR TCA 90 bp AGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTGATCATGCTCTGAGATaGTGGCAGAAAGGAAGCATT +
Preference number: 2 (lower is better)
Translates to: RKWEYKVFSTTWILSFFLDHALR*WQKGSI
Trigger: AATGCTTCCTTTCTGCCATCATCTCAGAGCATGATC...AAGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR-3UTR TCA 90 bp CATATATCTATAAACACTCTGATTCCTCACTGTATGGATTTGGAGGAAGTGGGAAATCTTTCTGCAATGTaGTCATGCTCTGAGATGATG +
Preference number: 2 (lower is better)
Translates to: HISINTLIPHCMDLEEVGNLSAM*SCSEMM
Trigger: CATCATCTCAGAGCATGATCACATTGCAGAAAGATT...TCCCACTTCCTCCAAATCCATACAGTGAGGAATCAGAGTGTTTATAGATATATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR-3UTR TCA 90 bp GTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAATCTTTCTGCAATGTaGTCATGCTCTGAGATGATG +
Preference number: 2 (lower is better)
Translates to: VWIWRKWEYKVFSTTWILNLSAM*SCSEMM
Trigger: CATCATCTCAGAGCATGATCACATTGCAGAAAGATT...TAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR-3UTR GCA 90 bp ATTAAGGGAAGACATACTTATAATAGTGCAGGATGTCTCTGGTGGCTTGTAGCAGAGGTTGTCATTCATTaGACAGCTAGAAAGATTAGA +
Preference number: 2 (lower is better)
Translates to: IKGRHTYNSAGCLWWLVAEVVIH*TARKIR
Trigger: TCTAATCTTTCTAGCTGTGCAATGAATGACAACCTC...TGCTACAAGCCACCAGAGACATCCTGCACTATTATAAGTATGTCTTCCCTTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392477.7
3UTR-3UTR CCA 90 bp CTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACAATTATAGTATCACTGACAGGAGGCCACTaGACAATTTGTTCTCTTTCA +
Preference number: 2 (lower is better)
Translates to: LFYIENTASGYALTIIVSLTGGH*TICSLS
Trigger: TGAAAGAGAACAAATTGTCCAGTGGCCTCCTGTCAG...TGATACTATAATTGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR-3UTR TCA 90 bp TCTGGATATGCTCTCACAATTATAGTATCATGGACTAAACTAGGTCAGAGTGAAAATGTACGCTTTTATTaGCTAAATGGAAAGCTGGCC +
Preference number: 2 (lower is better)
Translates to: SGYALTIIVSWTKLGQSENVRFY*LNGKLA
Trigger: GGCCAGCTTTCCATTTAGTCAATAAAAGCGTACATT...TTCACTCTGACCTAGTTTAGTCCATGATACTATAATTGTGAGAGCATATCCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR CAA 90 bp TCAACTCATATATCTATAAACACTCTGATTCCTCACTGTATGGATTaGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTT +
Preference number: 2 (lower is better)
Translates to: STHISINTLIPHCMD*EEVGVQSLFNNLDF
Trigger: AAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAGTGAGGAATCAGAGTGTTTATAGATATATGAGTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR-3UTR TCA 90 bp CTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACAATTATAGTATCAAATCTTTCTGCAATGTaGTCATGCTCTGAGATGATG +
Preference number: 2 (lower is better)
Translates to: LFYIENTASGYALTIIVSNLSAM*SCSEMM
Trigger: CATCATCTCAGAGCATGATCACATTGCAGAAAGATT...TGATACTATAATTGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR-3UTR TCA 90 bp ATACAGATATATAGATATATGCTGCTTAAGACCTATCACCCTAAACAATCAGGGCCAGATCCTGAACTATaGAGTCTTCCTTTTTGGAAA +
Preference number: 2 (lower is better)
Translates to: IQIYRYMLLKTYHPKQSGPDPEL*SLPFWK
Trigger: TTTCCAAAAAGGAAGACTTCATAGTTCAGGATCTGG...CCCTGATTGTTTAGGGTGATAGGTCTTAAGCAGCATATATCTATATATCTGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444128.2
3UTR-3UTR CCA 90 bp GAATGGACAATACTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACAAGAAACCAAGACAATTaGTCCAATTTGACGTTTTTC +
Preference number: 2 (lower is better)
Translates to: EWTILFYIENTASGYALTRNQDN*SNLTFF
Trigger: GAAAAACGTCAAATTGGACCAATTGTCTTGGTTTCT...TGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAGTATTGTCCATTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR-3UTR CAA 90 bp AGGATGTCTCTGGTGGCTTGTAGCACGGGGATGCATCTAATCATTTTCAGTAGAAGCAATGAAGACTGCTaGGGGTCTTCATCTAGCCCA +
Preference number: 3 (lower is better)
Translates to: RMSLVACSTGMHLIIFSRSNEDC*GSSSSP
Trigger: TGGGCTAGATGAAGACCCCAAGCAGTCTTCATTGCT...TCTACTGAAAATGATTAGATGCATCCCCGTGCTACAAGCCACCAGAGACATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392477.7
3UTR TCA 72 bp GACCTTCCAGAATCTTTCTGCAATGTGATCATGCTCTaGGATGATGGCAGAAAGGAAGCATTGGGGTGGGAT +
Preference number: 3 (lower is better)
Translates to: DLPESFCNVIML*DDGRKEALGWD
Trigger: ATCCCACCCCAATGCTTCCTTTCTGCCATCATCTCAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR-3UTR CAA 90 bp GAATGGACAATACTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACATGCAGTGGCACGATCTaGGCTCACTACAACCTCTGC +
Preference number: 3 (lower is better)
Translates to: EWTILFYIENTASGYALTCSGTI*AHYNLC
Trigger: GCAGAGGTTGTAGTGAGCCAAGATCGTGCCACTGCA...TGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAGTATTGTCCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR TCA 72 bp CCCTCTACATGGACCTTCCAGAATCTTTCTGCAATGTaGTCATGCTCTGAGATGATGGCAGAAAGGAAGCAT +
Preference number: 3 (lower is better)
Translates to: PSTWTFQNLSAM*SCSEMMAERKH
Trigger: ATGCTTCCTTTCTGCCATCATCTCAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTCCATGTAGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR CCA 72 bp TATGAACTGAGGAATTATGAAGCAATGAAGACTGCTTaGGGTCTTCATCTAGCCCAACATCTAGGGGCTAGG +
Preference number: 3 (lower is better)
Translates to: YELRNYEAMKTA*GLHLAQHLGAR
Trigger: CCTAGCCCCTAGATGTTGGGCTAGATGAAGACCCCAAGCAGTCTTCATTGCTTCATAATTCCTCAGTTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392477.7
3UTR TCA 72 bp CTCACACCAACACATTATTTAACGAGCAGGTTAAGGTaGAACTGCCAGTATGCTGTTAGTCAAGAGTCCTCA +
Preference number: 3 (lower is better)
Translates to: LTPTHYLTSRLR*NCQYAVSQESS
Trigger: TGAGGACTCTTGACTAACAGCATACTGGCAGTTTCACCTTAACCTGCTCGTTAAATAATGTGTTGGTGTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR TCA 72 bp AGGGTGGAACTGCCAAACATTTTAAAACAGATCTCATaGAAACTCCCTCACTATCATGAGAACAGCATGGGG +
Preference number: 3 (lower is better)
Translates to: RVELPNILKQIS*KLPHYHENSMG
Trigger: CCCCATGCTGTTCTCATGATAGTGAGGGAGTTTTCATGAGATCTGTTTTAAAATGTTTGGCAGTTCCACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392477.7
3UTR CCA 72 bp GAAAAGAGGTTTAATGGACTCACAGTTTCACATGGCTaGGTAGGCGTCAGGAAATTTACAATCATGGCAGAA +
Preference number: 3 (lower is better)
Translates to: EKRFNGLTVSHG*VGVRKFTIMAE
Trigger: TTCTGCCATGATTGTAAATTTCCTGACGCCTACCCAGCCATGTGAAACTGTGAGTCCATTAAACCTCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392477.7
3UTR-3UTR CAA 90 bp AAAACTTTAAAAGGCATCAAGGAGAGGGAGATCAAATTAAGGGAAGACATACTTCTCAAACTTGTGACCTaGAGTGATCCACCTGCCTCG +
Preference number: 3 (lower is better)
Translates to: KTLKGIKEREIKLREDILLKLVT*SDPPAS
Trigger: CGAGGCAGGTGGATCACTCAAGGTCACAAGTTTGAG...AAGTATGTCTTCCCTTAATTTGATCTCCCTCTCCTTGATGCCTTTTAAAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392477.7
3UTR-3UTR CAA 90 bp ATTAAGGGAAGACATACTTATAATAGTGCAGGATGTCTCTGGTGGCTTGTAGCAGTTAAGAGGAGGAGGTaGTCATTCATTGCACAGCTA +
Preference number: 3 (lower is better)
Translates to: IKGRHTYNSAGCLWWLVAVKRRR*SFIAQL
Trigger: TAGCTGTGCAATGAATGACAACCTCCTCCTCTTAAC...TGCTACAAGCCACCAGAGACATCCTGCACTATTATAAGTATGTCTTCCCTTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392477.7
3UTR-3UTR CAA 90 bp TCTGGATATGCTCTCACAATTATAGTATCATGGACTAAACTAGGTCAGAGTGAACCTCACTGTATGGATTaGGAGGAAGTGGGAGTACAA +
Preference number: 3 (lower is better)
Translates to: SGYALTIIVSWTKLGQSEPHCMD*EEVGVQ
Trigger: TTGTACTCCCACTTCCTCCAAATCCATACAGTGAGG...TTCACTCTGACCTAGTTTAGTCCATGATACTATAATTGTGAGAGCATATCCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR-3UTR CAA 90 bp GAATGGACAATACTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACAACTAGCAAGCAGTCTTaGGCTTTCATAAAAGTCTGG +
Preference number: 3 (lower is better)
Translates to: EWTILFYIENTASGYALTTSKQS*AFIKVW
Trigger: CCAGACTTTTATGAAAGCCAAAGACTGCTTGCTAGT...TGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAGTATTGTCCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR TCA 72 bp GCTGTTAGTCAAGAGTCCTCAGTAGGAGAACTTGAGTaGAACGTACACCCAGGCTACAGATTTAAAATTTTA +
Preference number: 3 (lower is better)
Translates to: AVSQESSVGELE*NVHPGYRFKIL
Trigger: TAAAATTTTAAATCTGTAGCCTGGGTGTACGTTTCACTCAAGTTCTCCTACTGAGGACTCTTGACTAACAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR-3UTR CAA 90 bp AGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTAAAGTGCTGCAAGAGTaGCTTCGTCCGTGGTATAAA +
Preference number: 3 (lower is better)
Translates to: RKWEYKVFSTTWILSFFLKVLQE*LRPWYK
Trigger: TTTATACCACGGACGAAGCAACTCTTGCAGCACTTT...AAGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444128.2
3UTR TCA 72 bp ATTTATCAGAGAGTAAAGTGTCCCTTACGGAAATTATaGAGTAGGTTAAGACAGATGTTAAGAGGAGGAGGT +
Preference number: 3 (lower is better)
Translates to: IYQRVKCPLRKL*SRLRQMLRGGG
Trigger: ACCTCCTCCTCTTAACATCTGTCTTAACCTACTTCATAATTTCCGTAAGGGACACTTTACTCTCTGATAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392477.7
3UTR-3UTR CAA 90 bp TCTGGATATGCTCTCACAATTATAGTATCATGGACTAAACTAGGTCAGAGTGAAAAATGTACGCTTTTATaGACTAAATGGAAAGCTGGC +
Preference number: 3 (lower is better)
Translates to: SGYALTIIVSWTKLGQSEKCTLL*TKWKAG
Trigger: GCCAGCTTTCCATTTAGTCAATAAAAGCGTACATTT...TTCACTCTGACCTAGTTTAGTCCATGATACTATAATTGTGAGAGCATATCCAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR-3UTR CAA 90 bp CTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACAATTATAGTATCAAAATGTACGCTTTTATaGACTAAATGGAAAGCTGGC +
Preference number: 3 (lower is better)
Translates to: LFYIENTASGYALTIIVSKCTLL*TKWKAG
Trigger: GCCAGCTTTCCATTTAGTCAATAAAAGCGTACATTT...TGATACTATAATTGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR CCA 72 bp ACAGCATCTGGATATGCTCTCACAATTATAGTATCATaGACTAAACTAGGTCAGAGTGAAGTATATGCAAAA +
Preference number: 3 (lower is better)
Translates to: TASGYALTIIVS*TKLGQSEVYAK
Trigger: TTTTGCATATACTTCACTCTGACCTAGTTTAGTCCATGATACTATAATTGTGAGAGCATATCCAGATGCTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR TCA 72 bp TTAAATTTGCATGGAATTAAGGAGTATAATAATTGTTaGTCTGACAGGAGGCCACTGGACAATTTGTTCTCT +
Preference number: 3 (lower is better)
Translates to: LNLHGIKEYNNC*SDRRPLDNLFS
Trigger: AGAGAACAAATTGTCCAGTGGCCTCCTGTCAGATCAACAATTATTATACTCCTTAATTCCATGCAAATTTAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp CTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAGTATACCCTTGCACCCTTaGAGGAAGGCGTCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LGWGFFFQPALGGLIEPSIPLHP*RKASGQ
Trigger: CTGGCCCGACGCCTTCCTGCAAGGGTGCAAGGGTAT...ACTGGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp AGGCTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAAGGAAGCATTGGGGTaGGATGAGGCAGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RLGWGFFFQPALGGLIEPKEALG*DEAGWA
Trigger: AGCCCAGCCTGCCTCATCCCACCCCAATGCTTCCTT...GGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp CTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAGTGGTGGCTACAGGGAATaGAGAGGGAGTTTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LGWGFFFQPALGGLIEPSGGYRE*RGSFQG
Trigger: GCCCTGGAAACTCCCTCTTCATTCCCTGTAGCCACC...ACTGGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR GCA 90 bp AGGCTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCGCTGCTTTCTCCGTTTaGCGTACTGCTGGACCATGG +
Preference number: 4 (lower is better)
Translates to: RLGWGFFFQPALGGLIEPAAFSV*RTAGPW
Trigger: CCATGGTCCAGCAGTACGGCAAACGGAGAAAGCAGC...GGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp AGGCTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAGTGCAGGATGTCTCTaGTGGCTTGTAGCACGGGGA +
Preference number: 4 (lower is better)
Translates to: RLGWGFFFQPALGGLIEPSAGCL*WLVARG
Trigger: TCCCCGTGCTACAAGCCACCAGAGACATCCTGCACT...GGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR GCA 90 bp AGGCTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAGGGCTGACTGCACCTaGATTTCCACGGCAGAATTG +
Preference number: 4 (lower is better)
Translates to: RLGWGFFFQPALGGLIEPRADCT*ISTAEL
Trigger: CAATTCTGCCGTGGAAATGCAGGTGCAGTCAGCCCT...GGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR GCA 90 bp AGGCTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCTCCCGTGCTCTAACGTaGTATAGGCCAGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: RLGWGFFFQPALGGLIEPSRALT*YRPVSM
Trigger: CATGGAGACTGGCCTATAGCACGTTAGAGCACGGGA...GGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp AGGCTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCGCAGTGGCACGATCTTaGCTCACTACAACCTCTGCT +
Preference number: 4 (lower is better)
Translates to: RLGWGFFFQPALGGLIEPAVARS*LTTTSA
Trigger: AGCAGAGGTTGTAGTGAGCCAAGATCGTGCCACTGC...GGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp AGGCTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCCATAGTAGCTGCATGTaGTCTTCCTGCGCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: RLGWGFFFQPALGGLIEPHSSCM*SSCALP
Trigger: AGGCAAAGCGCAGGAAGAGCACATGCAGCTACTATG...GGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp CTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAGTAGGAGAGTTGGCATCTaGCACAAAAAGGACCTGGCC +
Preference number: 4 (lower is better)
Translates to: LGWGFFFQPALGGLIEPSRRVGI*HKKDLA
Trigger: GGCCAGGTCCTTTTTGTGCCAGATGCCAACTCTCCT...ACTGGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp CTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAGTACTGTGGGAGAACCATaGGATGTCTCCCTAGAGGAG +
Preference number: 4 (lower is better)
Translates to: LGWGFFFQPALGGLIEPSTVGEP*DVSLEE
Trigger: CTCCTCTAGGGAGACATCCCATGGTTCTCCCACAGT...ACTGGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp CTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAGTATAGGCCAGTCTCCATaGATACCCTTGCACCCTTGC +
Preference number: 4 (lower is better)
Translates to: LGWGFFFQPALGGLIEPSIGQSP*IPLHPC
Trigger: GCAAGGGTGCAAGGGTATCCATGGAGACTGGCCTAT...ACTGGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp CTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAGTGCAGTGGCACGATCTTaGCTCACTACAACCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LGWGFFFQPALGGLIEPSAVARS*LTTTSA
Trigger: AGCAGAGGTTGTAGTGAGCCAAGATCGTGCCACTGC...ACTGGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp AGGCTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCTTGGTTTTCCCACTTTaGTGCACAGGAACATGGGTG +
Preference number: 4 (lower is better)
Translates to: RLGWGFFFQPALGGLIEPLVFPL*CTGTWV
Trigger: CACCCATGTTCCTGTGCATCAAAGTGGGAAAACCAA...GGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR TCA 90 bp CTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAGTGTAGGAGAACTTGAGTaGAACGTACACCCAGGCTAC +
Preference number: 4 (lower is better)
Translates to: LGWGFFFQPALGGLIEPSVGELE*NVHPGY
Trigger: GTAGCCTGGGTGTACGTTTCACTCAAGTTCTCCTAC...ACTGGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp CTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAGTCTCAGTAGGAGAACTTaGGTGAAACGTACACCCAGG +
Preference number: 4 (lower is better)
Translates to: LGWGFFFQPALGGLIEPSLSRRT*VKRTPR
Trigger: CCTGGGTGTACGTTTCACTCAAGTTCTCCTACTGAG...ACTGGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp CTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAGTAACCAGTACTCTGGCTaGTTTCTCCGTTTGCCGTAC +
Preference number: 4 (lower is better)
Translates to: LGWGFFFQPALGGLIEPSNQYSG*FLRLPY
Trigger: GTACGGCAAACGGAGAAAGCAGCCAGAGTACTGGTT...ACTGGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR GCA 90 bp CTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAGTTGCATGTGCTCTTCCTaGGCTTTGCCTCTTCAACAG +
Preference number: 4 (lower is better)
Translates to: LGWGFFFQPALGGLIEPSCMCSS*ALPLQQ
Trigger: CTGTTGAAGAGGCAAAGCGCAGGAAGAGCACATGCA...ACTGGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp CTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAGTATGGGATCACCCGCCTaGGAAAGAGAACTACTAAGG +
Preference number: 4 (lower is better)
Translates to: LGWGFFFQPALGGLIEPSMGSPA*ERELLR
Trigger: CCTTAGTAGTTCTCTTTCCCAGGCGGGTGATCCCAT...ACTGGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp CTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAGTAGCAAACCAGTACTCTaGCTGCTTTCTCCGTTTGCC +
Preference number: 4 (lower is better)
Translates to: LGWGFFFQPALGGLIEPSSKPVL*LLSPFA
Trigger: GGCAAACGGAGAAAGCAGCCAGAGTACTGGTTTGCT...ACTGGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTGGTGGCCTCTGCTGCTaGGCGCCGGGGAGCGCATCC +
Preference number: 4 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFGGLCC*APGSAS
Trigger: GGATGCGCTCCCCGGCGCCCAGCAGCAGAGGCCACC...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR TCA 90 bp AGGCTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCGTTGATATCCTTTTCTaGAGCCAGGTCTTCCCATTC +
Preference number: 4 (lower is better)
Translates to: RLGWGFFFQPALGGLIEPVDILF*SQVFPF
Trigger: GAATGGGAAGACCTGGCTTCAGAAAAGGATATCAAC...GGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR TCA 90 bp CTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAGTAAGAATGTGTACAAATaGTCCACCCTCTCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: LGWGFFFQPALGGLIEPSKNVYK*STLSRG
Trigger: TCCTCGGGAGAGGGTGGATCATTTGTACACATTCTT...ACTGGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR TCA 90 bp CTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAGTTCTTCCTTCCCAGTATaGGTCCTTGTAGCTACAGCT +
Preference number: 4 (lower is better)
Translates to: LGWGFFFQPALGGLIEPSSSFPV*VLVATA
Trigger: AGCTGTAGCTACAAGGACTCATACTGGGAAGGAAGA...ACTGGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR TCA 90 bp CTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAGTACGAGCAGGTTAAGGTaGAACTGCCAGTATGCTGTT +
Preference number: 4 (lower is better)
Translates to: LGWGFFFQPALGGLIEPSTSRLR*NCQYAV
Trigger: AACAGCATACTGGCAGTTTCACCTTAACCTGCTCGT...ACTGGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp TCACATGGCTGGGTAGGCGTCAGGAAATTTACAATCATGGCAGAAGGCAAAGGGCTCCGTTTGCCGTACTaGTGGACCATGGCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: SHGWVGVRKFTIMAEGKGLRLPY*WTMAAV
Trigger: CACTGCAGCCATGGTCCAGCAGTACGGCAAACGGAG...CCCTTTGCCTTCTGCCATGATTGTAAATTTCCTGACGCCTACCCAGCCATGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR GCA 90 bp AGGCTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCTCTTTCTTCAATGTCTaGCCTCTACATGGACCTTCC +
Preference number: 4 (lower is better)
Translates to: RLGWGFFFQPALGGLIEPSFFNV*PLHGPS
Trigger: GGAAGGTCCATGTAGAGGGCAGACATTGAAGAAAGA...GGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp GTCTGCCCTCTACATGGACCTTCCAGAATCTTTCTGCAATGTGATCATGCTCTGGGTCGCATGCATTTCTaGGAGCGGTGGCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: VCPLHGPSRIFLQCDHALGRMHF*ERWPLL
Trigger: CAGCAGAGGCCACCGCTCCCAGAAATGCATGCGACC...CAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTCCATGTAGAGGGCAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229634.13
ENST00000392477.7
CDS-3UTR CCA 90 bp CTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAGTCCAGCTCTTGGTTGTTaGCTCACTGAAGAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: LGWGFFFQPALGGLIEPSPALGC*LTEEVV
Trigger: GACAACTTCTTCAGTGAGCCAACAACCAAGAGCTGG...ACTGGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp AGGCTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCCTGACAGGAGGCCACTaGACAATTTGTTCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: RLGWGFFFQPALGGLIEPLTGGH*TICSLS
Trigger: TGAAAGAGAACAAATTGTCCAGTGGCCTCCTGTCAG...GGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp CTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAGTGATCATGCTCTGAGATaGTGGCAGAAAGGAAGCATT +
Preference number: 4 (lower is better)
Translates to: LGWGFFFQPALGGLIEPSDHALR*WQKGSI
Trigger: AATGCTTCCTTTCTGCCATCATCTCAGAGCATGATC...ACTGGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp AGGCTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCCCTCTTTTTAATCAGTaGGTCGTAACCTTGACTCAG +
Preference number: 4 (lower is better)
Translates to: RLGWGFFFQPALGGLIEPPLFNQ*VVTLTQ
Trigger: CTGAGTCAAGGTTACGACTCACTGATTAAAAAGAGG...GGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000368357.7
CDS-3UTR GCA 90 bp TCACATGGCTGGGTAGGCGTCAGGAAATTTACAATCATGGCAGAAGGCAAAGGGCTGCTGGACCATGGCTaGAGTGTGAGTGGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: SHGWVGVRKFTIMAEGKGLLDHG*SVSGKG
Trigger: TCCTTTGCCACTCACACTGCAGCCATGGTCCAGCAG...CCCTTTGCCTTCTGCCATGATTGTAAATTTCCTGACGCCTACCCAGCCATGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR GCA 90 bp GTCTGCCCTCTACATGGACCTTCCAGAATCTTTCTGCAATGTGATCATGCTCTGCTCCGTTTGCCGTACTaGTGGACCATGGCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: VCPLHGPSRIFLQCDHALLRLPY*WTMAAV
Trigger: CACTGCAGCCATGGTCCAGCAGTACGGCAAACGGAG...CAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTCCATGTAGAGGGCAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR GCA 90 bp CTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAGTTCTTTCTTCAATGTCTaGCCTCTACATGGACCTTCC +
Preference number: 4 (lower is better)
Translates to: LGWGFFFQPALGGLIEPSSFFNV*PLHGPS
Trigger: GGAAGGTCCATGTAGAGGGCAGACATTGAAGAAAGA...ACTGGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp CTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAGTATAGCCTTAAGGTACTaGAAGGAGAGTTGGCATCTG +
Preference number: 4 (lower is better)
Translates to: LGWGFFFQPALGGLIEPSIALRY*KESWHL
Trigger: CAGATGCCAACTCTCCTTCCAGTACCTTAAGGCTAT...ACTGGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp CTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAGTTGGCTGCAGTGTGAGTaGCAAAGGATTTTCTCATTG +
Preference number: 4 (lower is better)
Translates to: LGWGFFFQPALGGLIEPSWLQCE*QRIFSL
Trigger: CAATGAGAAAATCCTTTGCCACTCACACTGCAGCCA...ACTGGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp GTCTGCCCTCTACATGGACCTTCCAGAATCTTTCTGCAATGTGATCATGCTCTGAAGGAAGCATTGGGGTaGGATGAGGCAGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: VCPLHGPSRIFLQCDHALKEALG*DEAGWA
Trigger: AGCCCAGCCTGCCTCATCCCACCCCAATGCTTCCTT...CAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTCCATGTAGAGGGCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp CTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAGTGCTCTTCGTCAGGTCTaGCACAATAGAAAATCTGGA +
Preference number: 4 (lower is better)
Translates to: LGWGFFFQPALGGLIEPSALRQV*HNRKSG
Trigger: TCCAGATTTTCTATTGTGCCAGACCTGACGAAGAGC...ACTGGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp GTCTGCCCTCTACATGGACCTTCCAGAATCTTTCTGCAATGTGATCATGCTCTGCTTCCATGGGGCAGATaGGACCATACTCCTCACACC +
Preference number: 4 (lower is better)
Translates to: VCPLHGPSRIFLQCDHALLPWGR*DHTPHT
Trigger: GGTGTGAGGAGTATGGTCTCATCTGCCCCATGGAAG...CAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTCCATGTAGAGGGCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR TCA 90 bp AGGCTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCCTGAACTTGAAAGGATaGGTTGCATATGCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: RLGWGFFFQPALGGLIEPLNLKG*VAYAPK
Trigger: TTTTGGAGCATATGCAACTCATCCTTTCAAGTTCAG...GGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp AGGCTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAATCTTTCTGCAATGTaGTCATGCTCTGAGATGATG +
Preference number: 4 (lower is better)
Translates to: RLGWGFFFQPALGGLIEPNLSAM*SCSEMM
Trigger: CATCATCTCAGAGCATGATCACATTGCAGAAAGATT...GGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp AGGCTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCTTAGTTCTGTACGCCTaGTCTCCTTTAACTGATTAC +
Preference number: 4 (lower is better)
Translates to: RLGWGFFFQPALGGLIEPLVLYA*SPLTDY
Trigger: GTAATCAGTTAAAGGAGATCAGGCGTACAGAACTAA...GGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR TCA 90 bp CTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAGTGAGTATAATAATTGTTaGTCTGACAGGAGGCCACTG +
Preference number: 4 (lower is better)
Translates to: LGWGFFFQPALGGLIEPSEYNNC*SDRRPL
Trigger: CAGTGGCCTCCTGTCAGATCAACAATTATTATACTC...ACTGGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp GTCTGCCCTCTACATGGACCTTCCAGAATCTTTCTGCAATGTGATCATGCTCTGCTCCATGGATACCCTTaGACCCTTGCAGGAAGGCGT +
Preference number: 4 (lower is better)
Translates to: VCPLHGPSRIFLQCDHALLHGYP*TLAGRR
Trigger: ACGCCTTCCTGCAAGGGTGCAAGGGTATCCATGGAG...CAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTCCATGTAGAGGGCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp AGGCTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCATAAGACTCTTTCAATaGGTTTCAAGGCCTTTCGTG +
Preference number: 4 (lower is better)
Translates to: RLGWGFFFQPALGGLIEPIRLFQ*VSRPFV
Trigger: CACGAAAGGCCTTGAAACCCATTGAAAGAGTCTTAT...GGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp TGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTTCCAGGAGCGCGCTGTaGGGCCGTAGGACAGGCAGC +
Preference number: 4 (lower is better)
Translates to: CMDLEEVGVQSLFNNLDFSRSAL*GRRTGS
Trigger: GCTGCCTGTCCTACGGCCCCACAGCGCGCTCCTGGA...AAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp TCACATGGCTGGGTAGGCGTCAGGAAATTTACAATCATGGCAGAAGGCAAAGGGATCATGAGAACAGCATaGGGGAAACCGCCCCCATGT +
Preference number: 4 (lower is better)
Translates to: SHGWVGVRKFTIMAEGKGIMRTA*GKPPPC
Trigger: ACATGGGGGCGGTTTCCCCCATGCTGTTCTCATGAT...CCCTTTGCCTTCTGCCATGATTGTAAATTTCCTGACGCCTACCCAGCCATGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR TCA 90 bp GTCTGCCCTCTACATGGACCTTCCAGAATCTTTCTGCAATGTGATCATGCTCTGTTTCCAGGGCAGCAGTaGAAACATGAGCTCTGGACC +
Preference number: 4 (lower is better)
Translates to: VCPLHGPSRIFLQCDHALFPGQQ*KHELWT
Trigger: GGTCCAGAGCTCATGTTTTCACTGCTGCCCTGGAAA...CAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTCCATGTAGAGGGCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR GCA 90 bp AGGATGTCTCTGGTGGCTTGTAGCACGGGGATGCATCTAATCATTTTCAGTAGAAAGGCTAGGGCTGACTaGACCTGCATTTCCACGGCA +
Preference number: 4 (lower is better)
Translates to: RMSLVACSTGMHLIIFSRKARAD*TCISTA
Trigger: TGCCGTGGAAATGCAGGTGCAGTCAGCCCTAGCCTT...TCTACTGAAAATGATTAGATGCATCCCCGTGCTACAAGCCACCAGAGACATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR GCA 90 bp TCACATGGCTGGGTAGGCGTCAGGAAATTTACAATCATGGCAGAAGGCAAAGGGTCTGGCGAACCAGACTaGTTGTCCACTTCTGGCATT +
Preference number: 4 (lower is better)
Translates to: SHGWVGVRKFTIMAEGKGSGEPD*LSTSGI
Trigger: AATGCCAGAAGTGGACAAGCAGTCTGGTTCGCCAGA...CCCTTTGCCTTCTGCCATGATTGTAAATTTCCTGACGCCTACCCAGCCATGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR GCA 90 bp TCCTCCCACCCAAGTCCTTTGATATGGACTTATGAACTGAGGAATTATGAAGCAATACCCTTGCACCCTTaGAGGAAGGCGTCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SSHPSPLIWTYELRNYEAIPLHP*RKASGQ
Trigger: CTGGCCCGACGCCTTCCTGCAAGGGTGCAAGGGTAT...TGCTTCATAATTCCTCAGTTCATAAGTCCATATCAAAGGACTTGGGTGGGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR CCA 90 bp AGGCTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAATGTCTATTCCCCCTaGTTCAATACTTTTTCCATC +
Preference number: 4 (lower is better)
Translates to: RLGWGFFFQPALGGLIEPNVYSP*FNTFSI
Trigger: GATGGAAAAAGTATTGAACCAGGGGGAATAGACATT...GGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp TCACATGGCTGGGTAGGCGTCAGGAAATTTACAATCATGGCAGAAGGCAAAGGGTATTGCCCTCAGTTATaGGATCACCCGCCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: SHGWVGVRKFTIMAEGKGYCPQL*DHPPGK
Trigger: TTTCCCAGGCGGGTGATCCCATAACTGAGGGCAATA...CCCTTTGCCTTCTGCCATGATTGTAAATTTCCTGACGCCTACCCAGCCATGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR CCA 90 bp GAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTCCAGGAGCGCGCTGTaGGGCCGTAGGACAGGCAGC +
Preference number: 4 (lower is better)
Translates to: EEVGVQSLFNNLDFKFLSSRSAL*GRRTGS
Trigger: GCTGCCTGTCCTACGGCCCCACAGCGCGCTCCTGGA...AGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp GTCTGCCCTCTACATGGACCTTCCAGAATCTTTCTGCAATGTGATCATGCTCTGATAGGCCAGTCTCCATaGATACCCTTGCACCCTTGC +
Preference number: 4 (lower is better)
Translates to: VCPLHGPSRIFLQCDHALIGQSP*IPLHPC
Trigger: GCAAGGGTGCAAGGGTATCCATGGAGACTGGCCTAT...CAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTCCATGTAGAGGGCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp GTCTGCCCTCTACATGGACCTTCCAGAATCTTTCTGCAATGTGATCATGCTCTGAGAGCGTCTTTAAGCTaGTCCCGTGCTCTAACGTGC +
Preference number: 4 (lower is better)
Translates to: VCPLHGPSRIFLQCDHALRASLS*SRALTC
Trigger: GCACGTTAGAGCACGGGACCAGCTTAAAGACGCTCT...CAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTCCATGTAGAGGGCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp AGGCTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAGAGAACACAGCATCTaGATATGCTCTCACAATTAT +
Preference number: 4 (lower is better)
Translates to: RLGWGFFFQPALGGLIEPREHSI*ICSHNY
Trigger: ATAATTGTGAGAGCATATCCAGATGCTGTGTTCTCT...GGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp AGGCTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCCCAAGTCCTTTGATATaGACTTATGAACTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: RLGWGFFFQPALGGLIEPPSPLI*TYELRN
Trigger: ATTCCTCAGTTCATAAGTCCATATCAAAGGACTTGG...GGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR GCA 90 bp CTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAGTGAGGTTGTCATTCATTaGACAGCTAGAAAGATTAGA +
Preference number: 4 (lower is better)
Translates to: LGWGFFFQPALGGLIEPSEVVIH*TARKIR
Trigger: TCTAATCTTTCTAGCTGTGCAATGAATGACAACCTC...ACTGGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR CCA 90 bp GTCTGCCCTCTACATGGACCTTCCAGAATCTTTCTGCAATGTGATCATGCTCTGTTCTACTCGGCTTTCTaGCGAACCAGACTGCTTGTC +
Preference number: 4 (lower is better)
Translates to: VCPLHGPSRIFLQCDHALFYSAF*RTRLLV
Trigger: GACAAGCAGTCTGGTTCGCCAGAAAGCCGAGTAGAA...CAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTCCATGTAGAGGGCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp TCACATGGCTGGGTAGGCGTCAGGAAATTTACAATCATGGCAGAAGGCAAAGGGCACCCAGGTCTTATCTaGCTCTTTATTGCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: SHGWVGVRKFTIMAEGKGHPGLI*LFIALS
Trigger: ACTGAGGGCAATAAAGAGCCAGATAAGACCTGGGTG...CCCTTTGCCTTCTGCCATGATTGTAAATTTCCTGACGCCTACCCAGCCATGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR CCA 90 bp AAAACTTTAAAAGGCATCAAGGAGAGGGAGATCAAATTAAGGGAAGACATACTTTCCAGGAGCGCGCTGTaGGGCCGTAGGACAGGCAGC +
Preference number: 4 (lower is better)
Translates to: KTLKGIKEREIKLREDILSRSAL*GRRTGS
Trigger: GCTGCCTGTCCTACGGCCCCACAGCGCGCTCCTGGA...AAGTATGTCTTCCCTTAATTTGATCTCCCTCTCCTTGATGCCTTTTAAAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR CCA 90 bp AGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTTCCAGGAGCGCGCTGTaGGGCCGTAGGACAGGCAGC +
Preference number: 4 (lower is better)
Translates to: RKWEYKVFSTTWILSFFLSRSAL*GRRTGS
Trigger: GCTGCCTGTCCTACGGCCCCACAGCGCGCTCCTGGA...AAGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp AGGATGTCTCTGGTGGCTTGTAGCACGGGGATGCATCTAATCATTTTCAGTAGAAGAGCGTCTTTAAGCTaGTCCCGTGCTCTAACGTGC +
Preference number: 4 (lower is better)
Translates to: RMSLVACSTGMHLIIFSRRASLS*SRALTC
Trigger: GCACGTTAGAGCACGGGACCAGCTTAAAGACGCTCT...TCTACTGAAAATGATTAGATGCATCCCCGTGCTACAAGCCACCAGAGACATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR CCA 90 bp AGGCTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAGAAACCAAGACAATTaGTCCAATTTGACGTTTTTC +
Preference number: 4 (lower is better)
Translates to: RLGWGFFFQPALGGLIEPRNQDN*SNLTFF
Trigger: GAAAAACGTCAAATTGGACCAATTGTCTTGGTTTCT...GGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp TCACATGGCTGGGTAGGCGTCAGGAAATTTACAATCATGGCAGAAGGCAAAGGGAGACAATTAGGAGGGTaGCTACAGGGAATGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SHGWVGVRKFTIMAEGKGRQLGG*LQGMKR
Trigger: CCTCTTCATTCCCTGTAGCCACCCTCCTAATTGTCT...CCCTTTGCCTTCTGCCATGATTGTAAATTTCCTGACGCCTACCCAGCCATGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR TCA 90 bp GTCTGCCCTCTACATGGACCTTCCAGAATCTTTCTGCAATGTGATCATGCTCTGTCCATTTGTGCACCTTaGCAGCTGTTGTCCAGAGTA +
Preference number: 4 (lower is better)
Translates to: VCPLHGPSRIFLQCDHALSICAP*QLLSRV
Trigger: TACTCTGGACAACAGCTGTCAAGGTGCACAAATGGA...CAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTCCATGTAGAGGGCAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR TCA 90 bp GTCTGCCCTCTACATGGACCTTCCAGAATCTTTCTGCAATGTGATCATGCTCTGACGAGCAGGTTAAGGTaGAACTGCCAGTATGCTGTT +
Preference number: 4 (lower is better)
Translates to: VCPLHGPSRIFLQCDHALTSRLR*NCQYAV
Trigger: AACAGCATACTGGCAGTTTCACCTTAACCTGCTCGT...CAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTCCATGTAGAGGGCAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp ATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGAGGGGATCGGTCGCATaGATTTCTGGGAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: MDLEEVGVQSLFNNLDFKRGSVA*ISGSGG
Trigger: GCCACCGCTCCCAGAAATGCATGCGACCGATCCCCT...CTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000229634.13
ENST00000392477.7
CDS-3UTR GCA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTCTCCGTTTGCCGTACTaGTGGACCATGGCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFLRLPY*WTMAAV
Trigger: CACTGCAGCCATGGTCCAGCAGTACGGCAAACGGAG...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp ATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGGGTCGCATGCATTTCTaGGAGCGGTGGCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: MDLEEVGVQSLFNNLDFKGRMHF*ERWPLL
Trigger: CAGCAGAGGCCACCGCTCCCAGAAATGCATGCGACC...CTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229634.13
ENST00000392477.7
CDS-3UTR CCA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTAAGGAAGCATTGGGGTaGGATGAGGCAGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFKEALG*DEAGWA
Trigger: AGCCCAGCCTGCCTCATCCCACCCCAATGCTTCCTT...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp TCACATGGCTGGGTAGGCGTCAGGAAATTTACAATCATGGCAGAAGGCAAAGGGCTGACAGGAGGCCACTaGACAATTTGTTCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: SHGWVGVRKFTIMAEGKGLTGGH*TICSLS
Trigger: TGAAAGAGAACAAATTGTCCAGTGGCCTCCTGTCAG...CCCTTTGCCTTCTGCCATGATTGTAAATTTCCTGACGCCTACCCAGCCATGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR TCA 90 bp GTCTGCCCTCTACATGGACCTTCCAGAATCTTTCTGCAATGTGATCATGCTCTGCACACCTCCAGATCCTaGACTATGAAGTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: VCPLHGPSRIFLQCDHALHTSRS*TMKSSF
Trigger: AAAGGAAGACTTCATAGTTCAGGATCTGGAGGTGTG...CAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTCCATGTAGAGGGCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp GTCTGCCCTCTACATGGACCTTCCAGAATCTTTCTGCAATGTGATCATGCTCTGGATCATGCTCTGAGATaGTGGCAGAAAGGAAGCATT +
Preference number: 4 (lower is better)
Translates to: VCPLHGPSRIFLQCDHALDHALR*WQKGSI
Trigger: AATGCTTCCTTTCTGCCATCATCTCAGAGCATGATC...CAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTCCATGTAGAGGGCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp GTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAACTTGTGACCTTGAGTaGTCCACCTGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: VWIWRKWEYKVFSTTWILTCDLE*STCLGL
Trigger: GAGGCCGAGGCAGGTGGATCACTCAAGGTCACAAGT...TAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTCTGCTGGACCATGGCTaGAGTGTGAGTGGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFLLDHG*SVSGKG
Trigger: TCCTTTGCCACTCACACTGCAGCCATGGTCCAGCAG...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR GCA 90 bp TGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTGCCAGCTGCTCGATGTaGATATTCTCCAGGAGCGCG +
Preference number: 4 (lower is better)
Translates to: CMDLEEVGVQSLFNNLDFASCSM*IFSRSA
Trigger: CGCGCTCCTGGAGAATATGCACATCGAGCAGCTGGC...AAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp GTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAGCCAGCTGCTCGATGTaGATATTCTCCAGGAGCGCG +
Preference number: 4 (lower is better)
Translates to: VWIWRKWEYKVFSTTWILASCSM*IFSRSA
Trigger: CGCGCTCCTGGAGAATATGCACATCGAGCAGCTGGC...TAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp GTCTGCCCTCTACATGGACCTTCCAGAATCTTTCTGCAATGTGATCATGCTCTGTCTTTCTTCAATGTCTaGCCTCTACATGGACCTTCC +
Preference number: 4 (lower is better)
Translates to: VCPLHGPSRIFLQCDHALSFFNV*PLHGPS
Trigger: GGAAGGTCCATGTAGAGGGCAGACATTGAAGAAAGA...CAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTCCATGTAGAGGGCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp GTCTGCCCTCTACATGGACCTTCCAGAATCTTTCTGCAATGTGATCATGCTCTGGGCACAAAAAGGACCTaGCCTGGAACAATAGTATGT +
Preference number: 4 (lower is better)
Translates to: VCPLHGPSRIFLQCDHALGTKRT*PGTIVC
Trigger: ACATACTATTGTTCCAGGCCAGGTCCTTTTTGTGCC...CAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTCCATGTAGAGGGCAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp GTCTGCCCTCTACATGGACCTTCCAGAATCTTTCTGCAATGTGATCATGCTCTGTGGCTGCAGTGTGAGTaGCAAAGGATTTTCTCATTG +
Preference number: 4 (lower is better)
Translates to: VCPLHGPSRIFLQCDHALWLQCE*QRIFSL
Trigger: CAATGAGAAAATCCTTTGCCACTCACACTGCAGCCA...CAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTCCATGTAGAGGGCAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp GTCTGCCCTCTACATGGACCTTCCAGAATCTTTCTGCAATGTGATCATGCTCTGGAGTTGCTTCGTCCGTaGTATAAATCAGCATCTAGC +
Preference number: 4 (lower is better)
Translates to: VCPLHGPSRIFLQCDHALELLRP*YKSASS
Trigger: GCTAGATGCTGATTTATACCACGGACGAAGCAACTC...CAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTCCATGTAGAGGGCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp GTCTGCCCTCTACATGGACCTTCCAGAATCTTTCTGCAATGTGATCATGCTCTGACAGTTTCACATGGCTaGGTAGGCGTCAGGAAATTT +
Preference number: 4 (lower is better)
Translates to: VCPLHGPSRIFLQCDHALTVSHG*VGVRKF
Trigger: AAATTTCCTGACGCCTACCCAGCCATGTGAAACTGT...CAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTCCATGTAGAGGGCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR TCA 90 bp GTCTGCCCTCTACATGGACCTTCCAGAATCTTTCTGCAATGTGATCATGCTCTGACATCGGGAGACCACTaGACAAAGAATGTGTACAAA +
Preference number: 4 (lower is better)
Translates to: VCPLHGPSRIFLQCDHALTSGDH*TKNVYK
Trigger: TTTGTACACATTCTTTGTTCAGTGGTCTCCCGATGT...CAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTCCATGTAGAGGGCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR TCA 90 bp TCACATGGCTGGGTAGGCGTCAGGAAATTTACAATCATGGCAGAAGGCAAAGGGCCAGATCCTGAACTATaGAGTCTTCCTTTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: SHGWVGVRKFTIMAEGKGPDPEL*SLPFWK
Trigger: TTTCCAAAAAGGAAGACTTCATAGTTCAGGATCTGG...CCCTTTGCCTTCTGCCATGATTGTAAATTTCCTGACGCCTACCCAGCCATGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR TCA 90 bp GTCTGCCCTCTACATGGACCTTCCAGAATCTTTCTGCAATGTGATCATGCTCTGAATGTGATCATGCTCTaGGATGATGGCAGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: VCPLHGPSRIFLQCDHALNVIML*DDGRKE
Trigger: TTCCTTTCTGCCATCATCTCAGAGCATGATCACATT...CAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTCCATGTAGAGGGCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp TGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTCAGCAGAAGAGAGGGTaGGGGTGGAACTGCCAAACA +
Preference number: 4 (lower is better)
Translates to: CMDLEEVGVQSLFNNLDFQQKRG*GWNCQT
Trigger: TGTTTGGCAGTTCCACCCTCACCCTCTCTTCTGCTG...AAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR GCA 90 bp GTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAAGGCTAGGGCTGACTaGACCTGCATTTCCACGGCA +
Preference number: 4 (lower is better)
Translates to: VWIWRKWEYKVFSTTWILKARAD*TCISTA
Trigger: TGCCGTGGAAATGCAGGTGCAGTCAGCCCTAGCCTT...TAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR GCA 90 bp ATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGGCTGCTTTCTCCGTTTaGCGTACTGCTGGACCATGG +
Preference number: 4 (lower is better)
Translates to: MDLEEVGVQSLFNNLDFKAAFSV*RTAGPW
Trigger: CCATGGTCCAGCAGTACGGCAAACGGAGAAAGCAGC...CTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR GCA 90 bp GAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTGCCAGCTGCTCGATGTaGATATTCTCCAGGAGCGCG +
Preference number: 4 (lower is better)
Translates to: EEVGVQSLFNNLDFKFLSASCSM*IFSRSA
Trigger: CGCGCTCCTGGAGAATATGCACATCGAGCAGCTGGC...AGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp TGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTGCCAGCTGCTCGATGTaGATATTCTCCAGGAGCGCG +
Preference number: 4 (lower is better)
Translates to: WRKWEYKVFSTTWILSFFASCSM*IFSRSA
Trigger: CGCGCTCCTGGAGAATATGCACATCGAGCAGCTGGC...AAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp TCTGGATATGCTCTCACAATTATAGTATCATGGACTAAACTAGGTCAGAGTGAAGCCAGCTGCTCGATGTaGATATTCTCCAGGAGCGCG +
Preference number: 4 (lower is better)
Translates to: SGYALTIIVSWTKLGQSEASCSM*IFSRSA
Trigger: CGCGCTCCTGGAGAATATGCACATCGAGCAGCTGGC...TTCACTCTGACCTAGTTTAGTCCATGATACTATAATTGTGAGAGCATATCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp AGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTATACCCTTGCACCCTTaGAGGAAGGCGTCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: RKWEYKVFSTTWILSFFLIPLHP*RKASGQ
Trigger: CTGGCCCGACGCCTTCCTGCAAGGGTGCAAGGGTAT...AAGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp ATACAGATATATAGATATATGCTGCTTAAGACCTATCACCCTAAACAATCAGGGATACCCTTGCACCCTTaGAGGAAGGCGTCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: IQIYRYMLLKTYHPKQSGIPLHP*RKASGQ
Trigger: CTGGCCCGACGCCTTCCTGCAAGGGTGCAAGGGTAT...CCCTGATTGTTTAGGGTGATAGGTCTTAAGCAGCATATATCTATATATCTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp GAATGGACAATACTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACACTCCATGGATACCCTTaGACCCTTGCAGGAAGGCGT +
Preference number: 4 (lower is better)
Translates to: EWTILFYIENTASGYALTLHGYP*TLAGRR
Trigger: ACGCCTTCCTGCAAGGGTGCAAGGGTATCCATGGAG...TGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAGTATTGTCCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp ATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGCTCCATGGATACCCTTaGACCCTTGCAGGAAGGCGT +
Preference number: 4 (lower is better)
Translates to: MDLEEVGVQSLFNNLDFKLHGYP*TLAGRR
Trigger: ACGCCTTCCTGCAAGGGTGCAAGGGTATCCATGGAG...CTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp GTCTGCCCTCTACATGGACCTTCCAGAATCTTTCTGCAATGTGATCATGCTCTGAAGTGCTGCAAGAGTTaGTTCGTCCGTGGTATAAAT +
Preference number: 4 (lower is better)
Translates to: VCPLHGPSRIFLQCDHALKCCKS*FVRGIN
Trigger: ATTTATACCACGGACGAAGCAACTCTTGCAGCACTT...CAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTCCATGTAGAGGGCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTTCAAGCAATTCTCCTaGCTCAGCCTCCCGAGTAGG +
Preference number: 4 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFFKQFS*LSLPSR
Trigger: CCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAA...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp TCCTCCCACCCAAGTCCTTTGATATGGACTTATGAACTGAGGAATTATGAAGCATTACCCAGGATAGAGTaGAGTGGCACGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SSHPSPLIWTYELRNYEALPRIE*SGTILA
Trigger: AGCCAAGATCGTGCCACTGCACTCTATCCTGGGTAA...TGCTTCATAATTCCTCAGTTCATAAGTCCATATCAAAGGACTTGGGTGGGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR GCA 90 bp GTCTGCCCTCTACATGGACCTTCCAGAATCTTTCTGCAATGTGATCATGCTCTGGTTTTCTCTCTACTCTaGTTCCACACCACAGTTACT +
Preference number: 4 (lower is better)
Translates to: VCPLHGPSRIFLQCDHALVFSLL*FHTTVT
Trigger: AGTAACTGTGGTGTGGAAGCAGAGTAGAGAGAAAAC...CAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTCCATGTAGAGGGCAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438495.6
CDS-3UTR CCA 90 bp ATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGCGTACTGCTGGACCATaGCTGCAGTGTGAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: MDLEEVGVQSLFNNLDFKRTAGP*LQCEWQ
Trigger: TTGCCACTCACACTGCAGCCATGGTCCAGCAGTACG...CTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp TGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTCGTACTGCTGGACCATaGCTGCAGTGTGAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: CMDLEEVGVQSLFNNLDFRTAGP*LQCEWQ
Trigger: TTGCCACTCACACTGCAGCCATGGTCCAGCAGTACG...AAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp GTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTACGTACTGCTGGACCATaGCTGCAGTGTGAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: VWIWRKWEYKVFSTTWILRTAGP*LQCEWQ
Trigger: TTGCCACTCACACTGCAGCCATGGTCCAGCAGTACG...TAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTAGAGCGTCTTTAAGCTaGTCCCGTGCTCTAACGTGC +
Preference number: 4 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFRASLS*SRALTC
Trigger: GCACGTTAGAGCACGGGACCAGCTTAAAGACGCTCT...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp GTCTGCCCTCTACATGGACCTTCCAGAATCTTTCTGCAATGTGATCATGCTCTGAGAGGATCAGATTTATaGGGGTCAAACATGATGTTG +
Preference number: 4 (lower is better)
Translates to: VCPLHGPSRIFLQCDHALRGSDL*GSNMML
Trigger: CAACATCATGTTTGACCCTCATAAATCTGATCCTCT...CAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTCCATGTAGAGGGCAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR TCA 90 bp GAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTCTTCCATGGGGCAGATaGGACCATACTCCTCACACC +
Preference number: 4 (lower is better)
Translates to: EEVGVQSLFNNLDFKFLSLPWGR*DHTPHT
Trigger: GGTGTGAGGAGTATGGTCTCATCTGCCCCATGGAAG...AGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR TCA 90 bp GTTTCACATGGCTGGGTAGGCGTCAGGAAATTTACAATCATGGCAGAAGGCAAATGGTTGTTGGCTCACTaGAGAAGTTGTCAATCATGT +
Preference number: 4 (lower is better)
Translates to: VSHGWVGVRKFTIMAEGKWLLAH*RSCQSC
Trigger: ACATGATTGACAACTTCTTCAGTGAGCCAACAACCA...TTTGCCTTCTGCCATGATTGTAAATTTCCTGACGCCTACCCAGCCATGTGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR TCA 90 bp AGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTACTTGTGACCTTGAGTaGTCCACCTGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: RKWEYKVFSTTWILSFFLTCDLE*STCLGL
Trigger: GAGGCCGAGGCAGGTGGATCACTCAAGGTCACAAGT...AAGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp ATACAGATATATAGATATATGCTGCTTAAGACCTATCACCCTAAACAATCAGGGACTTGTGACCTTGAGTaGTCCACCTGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: IQIYRYMLLKTYHPKQSGTCDLE*STCLGL
Trigger: GAGGCCGAGGCAGGTGGATCACTCAAGGTCACAAGT...CCCTGATTGTTTAGGGTGATAGGTCTTAAGCAGCATATATCTATATATCTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTGTAGGAGAACTTGAGTaGAACGTACACCCAGGCTAC +
Preference number: 4 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFVGELE*NVHPGY
Trigger: GTAGCCTGGGTGTACGTTTCACTCAAGTTCTCCTAC...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp TGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTAAGGCTAGGGCTGACTaGACCTGCATTTCCACGGCA +
Preference number: 4 (lower is better)
Translates to: WRKWEYKVFSTTWILSFFKARAD*TCISTA
Trigger: TGCCGTGGAAATGCAGGTGCAGTCAGCCCTAGCCTT...AAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR GCA 90 bp TGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTCCATGGATACCCTTaGACCCTTGCAGGAAGGCGT +
Preference number: 4 (lower is better)
Translates to: WRKWEYKVFSTTWILSFFLHGYP*TLAGRR
Trigger: ACGCCTTCCTGCAAGGGTGCAAGGGTATCCATGGAG...AAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp CATATATCTATAAACACTCTGATTCCTCACTGTATGGATTTGGAGGAAGTGGGATTCAAGCAATTCTCCTaGCTCAGCCTCCCGAGTAGG +
Preference number: 4 (lower is better)
Translates to: HISINTLIPHCMDLEEVGFKQFS*LSLPSR
Trigger: CCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAA...TCCCACTTCCTCCAAATCCATACAGTGAGGAATCAGAGTGTTTATAGATATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp GTCTGCCCTCTACATGGACCTTCCAGAATCTTTCTGCAATGTGATCATGCTCTGAAAAAGGACCTGGCCTaGAACAATAGTATGTGTGAA +
Preference number: 4 (lower is better)
Translates to: VCPLHGPSRIFLQCDHALKKDLA*NNSMCE
Trigger: TTCACACATACTATTGTTCCAGGCCAGGTCCTTTTT...CAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTCCATGTAGAGGGCAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp TGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAGGAGAGTTGGCATCTaGCACAAAAAGGACCTGGCC +
Preference number: 4 (lower is better)
Translates to: CMDLEEVGVQSLFNNLDFRRVGI*HKKDLA
Trigger: GGCCAGGTCCTTTTTGTGCCAGATGCCAACTCTCCT...AAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp GAATGGACAATACTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACAACTGTGGGAGAACCATaGGATGTCTCCCTAGAGGAG +
Preference number: 4 (lower is better)
Translates to: EWTILFYIENTASGYALTTVGEP*DVSLEE
Trigger: CTCCTCTAGGGAGACATCCCATGGTTCTCCCACAGT...TGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAGTATTGTCCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTTCTACTCGGCTTTCTaGCGAACCAGACTGCTTGTC +
Preference number: 4 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFFYSAF*RTRLLV
Trigger: GACAAGCAGTCTGGTTCGCCAGAAAGCCGAGTAGAA...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTATGGGATCACCCGCCTaGGAAAGAGAACTACTAAGG +
Preference number: 4 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFMGSPA*ERELLR
Trigger: CCTTAGTAGTTCTCTTTCCCAGGCGGGTGATCCCAT...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTAGCAAACCAGTACTCTaGCTGCTTTCTCCGTTTGCC +
Preference number: 4 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFSKPVL*LLSPFA
Trigger: GGCAAACGGAGAAAGCAGCCAGAGTACTGGTTTGCT...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp TCCTCCCACCCAAGTCCTTTGATATGGACTTATGAACTGAGGAATTATGAAGCACCAGCTCTTGGTTGTTaGCTCACTGAAGAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: SSHPSPLIWTYELRNYEAPALGC*LTEEVV
Trigger: GACAACTTCTTCAGTGAGCCAACAACCAAGAGCTGG...TGCTTCATAATTCCTCAGTTCATAAGTCCATATCAAAGGACTTGGGTGGGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR CCA 90 bp TGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTATAGGCCAGTCTCCATaGATACCCTTGCACCCTTGC +
Preference number: 4 (lower is better)
Translates to: CMDLEEVGVQSLFNNLDFIGQSP*IPLHPC
Trigger: GCAAGGGTGCAAGGGTATCCATGGAGACTGGCCTAT...AAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp TGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAGAGCGTCTTTAAGCTaGTCCCGTGCTCTAACGTGC +
Preference number: 4 (lower is better)
Translates to: CMDLEEVGVQSLFNNLDFRASLS*SRALTC
Trigger: GCACGTTAGAGCACGGGACCAGCTTAAAGACGCTCT...AAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp CATATATCTATAAACACTCTGATTCCTCACTGTATGGATTTGGAGGAAGTGGGATTGACTCAGGCCGGTTaGGACACAGGAGGCAAATAC +
Preference number: 4 (lower is better)
Translates to: HISINTLIPHCMDLEEVGLTQAG*DTGGKY
Trigger: GTATTTGCCTCCTGTGTCCCAACCGGCCTGAGTCAA...TCCCACTTCCTCCAAATCCATACAGTGAGGAATCAGAGTGTTTATAGATATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368357.7
CDS-3UTR CCA 90 bp CATATATCTATAAACACTCTGATTCCTCACTGTATGGATTTGGAGGAAGTGGGAGCAGTGGCACGATCTTaGCTCACTACAACCTCTGCT +
Preference number: 4 (lower is better)
Translates to: HISINTLIPHCMDLEEVGAVARS*LTTTSA
Trigger: AGCAGAGGTTGTAGTGAGCCAAGATCGTGCCACTGC...TCCCACTTCCTCCAAATCCATACAGTGAGGAATCAGAGTGTTTATAGATATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp ATACAGATATATAGATATATGCTGCTTAAGACCTATCACCCTAAACAATCAGGGGCAGGATGTCTCTGGTaGCTTGTAGCACGGGGATGC +
Preference number: 4 (lower is better)
Translates to: IQIYRYMLLKTYHPKQSGAGCLW*LVARGC
Trigger: GCATCCCCGTGCTACAAGCCACCAGAGACATCCTGC...CCCTGATTGTTTAGGGTGATAGGTCTTAAGCAGCATATATCTATATATCTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR CCA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTCCAATGAGATGTTGGTaGGGACACACAGCCAAACCA +
Preference number: 4 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFPMRCW*GHTAKP
Trigger: TGGTTTGGCTGTGTGTCCCCACCAACATCTCATTGG...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR TCA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTCCTCTTTTTAATCAGTaGGTCGTAACCCTACAGGGC +
Preference number: 4 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFPLFNQ*VVTLQG
Trigger: GCCCTGTAGGGTTACGACTCACTGATTAAAAAGAGG...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229634.13
ENST00000392477.7
CDS-3UTR TCA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTAAGAATGTGTACAAATaGTCCACCCTCTCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFKNVYK*STLSRG
Trigger: TCCTCGGGAGAGGGTGGATCATTTGTACACATTCTT...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR TCA 90 bp GTTTCACATGGCTGGGTAGGCGTCAGGAAATTTACAATCATGGCAGAAGGCAAACTGAACTTGAAAGGATaGGTTGCATATGCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: VSHGWVGVRKFTIMAEGKLNLKG*VAYAPK
Trigger: TTTTGGAGCATATGCAACTCATCCTTTCAAGTTCAG...TTTGCCTTCTGCCATGATTGTAAATTTCCTGACGCCTACCCAGCCATGTGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR TCA 90 bp GAATGGACAATACTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACACCTTGTAGCTACAGCTaGGGCTGTCTCTGCATTTTG +
Preference number: 4 (lower is better)
Translates to: EWTILFYIENTASGYALTPCSYS*GCLCIL
Trigger: CAAAATGCAGAGACAGCCTCAGCTGTAGCTACAAGG...TGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAGTATTGTCCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR TCA 90 bp GTTTCACATGGCTGGGTAGGCGTCAGGAAATTTACAATCATGGCAGAAGGCAAATTAGTTCTGTACGCCTaGTCTCCTTTAACTGATTAC +
Preference number: 4 (lower is better)
Translates to: VSHGWVGVRKFTIMAEGKLVLYA*SPLTDY
Trigger: GTAATCAGTTAAAGGAGATCAGGCGTACAGAACTAA...TTTGCCTTCTGCCATGATTGTAAATTTCCTGACGCCTACCCAGCCATGTGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR TCA 90 bp ATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGGTAGGAGAACTTGAGTaGAACGTACACCCAGGCTAC +
Preference number: 4 (lower is better)
Translates to: MDLEEVGVQSLFNNLDFKVGELE*NVHPGY
Trigger: GTAGCCTGGGTGTACGTTTCACTCAAGTTCTCCTAC...CTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTACGAGCAGGTTAAGGTaGAACTGCCAGTATGCTGTT +
Preference number: 4 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFTSRLR*NCQYAV
Trigger: AACAGCATACTGGCAGTTTCACCTTAACCTGCTCGT...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp AGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTCTGCTGGACCATGGCTaGAGTGTGAGTGGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: RKWEYKVFSTTWILSFFLLLDHG*SVSGKG
Trigger: TCCTTTGCCACTCACACTGCAGCCATGGTCCAGCAG...AAGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR GCA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTGCTCTTCCTGCGCTTTaGCTCTTCAACAGTGATGAT +
Preference number: 4 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFALPAL*LFNSDD
Trigger: ATCATCACTGTTGAAGAGGCAAAGCGCAGGAAGAGC...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp ATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTGCATGTGCTCTTCCTaGGCTTTGCCTCTTCAACAG +
Preference number: 4 (lower is better)
Translates to: MDLEEVGVQSLFNNLDFKCMCSS*ALPLQQ
Trigger: CTGTTGAAGAGGCAAAGCGCAGGAAGAGCACATGCA...CTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp TGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTTGCATGTGCTCTTCCTaGGCTTTGCCTCTTCAACAG +
Preference number: 4 (lower is better)
Translates to: CMDLEEVGVQSLFNNLDFCMCSS*ALPLQQ
Trigger: CTGTTGAAGAGGCAAAGCGCAGGAAGAGCACATGCA...AAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp TGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTCATAGTAGCTGCATGTaGTCTTCCTGCGCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: CMDLEEVGVQSLFNNLDFHSSCM*SSCALP
Trigger: AGGCAAAGCGCAGGAAGAGCACATGCAGCTACTATG...AAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp GAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTCCCGTGCTCTAACGTaGTATAGGCCAGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: EEVGVQSLFNNLDFKFLSSRALT*YRPVSM
Trigger: CATGGAGACTGGCCTATAGCACGTTAGAGCACGGGA...AGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp TGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTTCCCGTGCTCTAACGTaGTATAGGCCAGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: WRKWEYKVFSTTWILSFFSRALT*YRPVSM
Trigger: CATGGAGACTGGCCTATAGCACGTTAGAGCACGGGA...AAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp TGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAGCTTCCTTCCATCTTaGAGCGGAGCGAAGTCTCTT +
Preference number: 4 (lower is better)
Translates to: CMDLEEVGVQSLFNNLDFSFLPS*SGAKSL
Trigger: AAGAGACTTCGCTCCGCTGCAAGATGGAAGGAAGCT...AAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368357.7
CDS-3UTR GCA 90 bp GAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTTCAAGCAATTCTCCTaGCTCAGCCTCCCGAGTAGG +
Preference number: 4 (lower is better)
Translates to: EEVGVQSLFNNLDFKFLSFKQFS*LSLPSR
Trigger: CCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAA...AGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp CATATATCTATAAACACTCTGATTCCTCACTGTATGGATTTGGAGGAAGTGGGATTACCCAGGATAGAGTaGAGTGGCACGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: HISINTLIPHCMDLEEVGLPRIE*SGTILA
Trigger: AGCCAAGATCGTGCCACTGCACTCTATCCTGGGTAA...TCCCACTTCCTCCAAATCCATACAGTGAGGAATCAGAGTGTTTATAGATATATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp TCTGGATATGCTCTCACAATTATAGTATCATGGACTAAACTAGGTCAGAGTGAAAGGAGAGTTGGCATCTaGCACAAAAAGGACCTGGCC +
Preference number: 4 (lower is better)
Translates to: SGYALTIIVSWTKLGQSERRVGI*HKKDLA
Trigger: GGCCAGGTCCTTTTTGTGCCAGATGCCAACTCTCCT...TTCACTCTGACCTAGTTTAGTCCATGATACTATAATTGTGAGAGCATATCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp AGGATGTCTCTGGTGGCTTGTAGCACGGGGATGCATCTAATCATTTTCAGTAGAATAAGACTCTTTCAATaGGTTTCAAGGCCTTTCGTG +
Preference number: 4 (lower is better)
Translates to: RMSLVACSTGMHLIIFSRIRLFQ*VSRPFV
Trigger: CACGAAAGGCCTTGAAACCCATTGAAAGAGTCTTAT...TCTACTGAAAATGATTAGATGCATCCCCGTGCTACAAGCCACCAGAGACATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR CCA 90 bp GTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTATTCTACTCGGCTTTCTaGCGAACCAGACTGCTTGTC +
Preference number: 4 (lower is better)
Translates to: VWIWRKWEYKVFSTTWILFYSAF*RTRLLV
Trigger: GACAAGCAGTCTGGTTCGCCAGAAAGCCGAGTAGAA...TAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp TGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTTATTGCCCTCAGTTATaGGATCACCCGCCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: CMDLEEVGVQSLFNNLDFYCPQL*DHPPGK
Trigger: TTTCCCAGGCGGGTGATCCCATAACTGAGGGCAATA...AAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp GAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTATAGGCCAGTCTCCATaGATACCCTTGCACCCTTGC +
Preference number: 4 (lower is better)
Translates to: EEVGVQSLFNNLDFKFLSIGQSP*IPLHPC
Trigger: GCAAGGGTGCAAGGGTATCCATGGAGACTGGCCTAT...AGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp TGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTATAGGCCAGTCTCCATaGATACCCTTGCACCCTTGC +
Preference number: 4 (lower is better)
Translates to: WRKWEYKVFSTTWILSFFIGQSP*IPLHPC
Trigger: GCAAGGGTGCAAGGGTATCCATGGAGACTGGCCTAT...AAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTCCATGTTGGCCAGACTaGTCTCAAACTTGTGACCTT +
Preference number: 4 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFPCWPD*SQTCDL
Trigger: AAGGTCACAAGTTTGAGACCAGTCTGGCCAACATGG...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR CAA 72 bp GAAAGATTAGAAGAGACTGGTAGATACAGCCAAGAGTaGTCTCTGGTAACCATAATGAGAGCAGTTTCCGTG +
Preference number: 4 (lower is better)
Translates to: ERLEETGRYSQE*SLVTIMRAVSV
Trigger: CACGGAAACTGCTCTCATTATGGTTACCAGAGACAACTCTTGGCTGTATCTACCAGTCTCTTCTAATCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR TCA 90 bp ATTAAGGGAAGACATACTTATAATAGTGCAGGATGTCTCTGGTGGCTTGTAGCAGTTGATATCCTTTTCTaGAGCCAGGTCTTCCCATTC +
Preference number: 4 (lower is better)
Translates to: IKGRHTYNSAGCLWWLVAVDILF*SQVFPF
Trigger: GAATGGGAAGACCTGGCTTCAGAAAAGGATATCAAC...TGCTACAAGCCACCAGAGACATCCTGCACTATTATAAGTATGTCTTCCCTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR TCA 90 bp TCCTCCCACCCAAGTCCTTTGATATGGACTTATGAACTGAGGAATTATGAAGCAATTCCACCACCAGTTTaGGAAGAAAGTTCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: SSHPSPLIWTYELRNYEAIPPPV*EESSSK
Trigger: CTTGGAAGAACTTTCTTCTCAAACTGGTGGTGGAAT...TGCTTCATAATTCCTCAGTTCATAAGTCCATATCAAAGGACTTGGGTGGGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR TCA 90 bp GTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAAGAATGTGTACAAATaGTCCACCCTCTCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: VWIWRKWEYKVFSTTWILKNVYK*STLSRG
Trigger: TCCTCGGGAGAGGGTGGATCATTTGTACACATTCTT...TAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR TCA 90 bp GAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTCCTTGTAGCTACAGCTaGGGCTGTCTCTGCATTTTG +
Preference number: 4 (lower is better)
Translates to: EEVGVQSLFNNLDFKFLSPCSYS*GCLCIL
Trigger: CAAAATGCAGAGACAGCCTCAGCTGTAGCTACAAGG...AGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR TCA 90 bp TGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTAGAGGACAAAGATCCTaGGGTAGGTCAGATGGCAAG +
Preference number: 4 (lower is better)
Translates to: WRKWEYKVFSTTWILSFFRGQRS*GRSDGK
Trigger: CTTGCCATCTGACCTACCTCAGGATCTTTGTCCTCT...AAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR TCA 90 bp TCCTCCCACCCAAGTCCTTTGATATGGACTTATGAACTGAGGAATTATGAAGCAGAGTATAATAATTGTTaGTCTGACAGGAGGCCACTG +
Preference number: 4 (lower is better)
Translates to: SSHPSPLIWTYELRNYEAEYNNC*SDRRPL
Trigger: CAGTGGCCTCCTGTCAGATCAACAATTATTATACTC...TGCTTCATAATTCCTCAGTTCATAAGTCCATATCAAAGGACTTGGGTGGGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR TCA 90 bp TGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTGTAGGAGAACTTGAGTaGAACGTACACCCAGGCTAC +
Preference number: 4 (lower is better)
Translates to: WRKWEYKVFSTTWILSFFVGELE*NVHPGY
Trigger: GTAGCCTGGGTGTACGTTTCACTCAAGTTCTCCTAC...AAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp GAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTCTCAGTAGGAGAACTTaGGTGAAACGTACACCCAGG +
Preference number: 4 (lower is better)
Translates to: EEVGVQSLFNNLDFKFLSLSRRT*VKRTPR
Trigger: CCTGGGTGTACGTTTCACTCAAGTTCTCCTACTGAG...AGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp TGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTCAGTAGGAGAACTTaGGTGAAACGTACACCCAGG +
Preference number: 4 (lower is better)
Translates to: WRKWEYKVFSTTWILSFFLSRRT*VKRTPR
Trigger: CCTGGGTGTACGTTTCACTCAAGTTCTCCTACTGAG...AAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp ATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGACGAGCAGGTTAAGGTaGAACTGCCAGTATGCTGTT +
Preference number: 4 (lower is better)
Translates to: MDLEEVGVQSLFNNLDFKTSRLR*NCQYAV
Trigger: AACAGCATACTGGCAGTTTCACCTTAACCTGCTCGT...CTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp ATACAGATATATAGATATATGCTGCTTAAGACCTATCACCCTAAACAATCAGGGAGGGCTGACTGCACCTaGATTTCCACGGCAGAATTG +
Preference number: 4 (lower is better)
Translates to: IQIYRYMLLKTYHPKQSGRADCT*ISTAEL
Trigger: CAATTCTGCCGTGGAAATGCAGGTGCAGTCAGCCCT...CCCTGATTGTTTAGGGTGATAGGTCTTAAGCAGCATATATCTATATATCTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR GCA 90 bp GAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTCTGGCGAACCAGACTaGTTGTCCACTTCTGGCATT +
Preference number: 4 (lower is better)
Translates to: EEVGVQSLFNNLDFKFLSSGEPD*LSTSGI
Trigger: AATGCCAGAAGTGGACAAGCAGTCTGGTTCGCCAGA...AGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR GCA 90 bp TGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTAACCAGTACTCTGGCTaGTTTCTCCGTTTGCCGTAC +
Preference number: 4 (lower is better)
Translates to: WRKWEYKVFSTTWILSFFNQYSG*FLRLPY
Trigger: GTACGGCAAACGGAGAAAGCAGCCAGAGTACTGGTT...AAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR GCA 90 bp GAATGGACAATACTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACAGCTCTTCCTGCGCTTTaGCTCTTCAACAGTGATGAT +
Preference number: 4 (lower is better)
Translates to: EWTILFYIENTASGYALTALPAL*LFNSDD
Trigger: ATCATCACTGTTGAAGAGGCAAAGCGCAGGAAGAGC...TGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAGTATTGTCCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp TGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTGCTCTTCCTGCGCTTTaGCTCTTCAACAGTGATGAT +
Preference number: 4 (lower is better)
Translates to: CMDLEEVGVQSLFNNLDFALPAL*LFNSDD
Trigger: ATCATCACTGTTGAAGAGGCAAAGCGCAGGAAGAGC...AAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp GAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTGCATGTGCTCTTCCTaGGCTTTGCCTCTTCAACAG +
Preference number: 4 (lower is better)
Translates to: EEVGVQSLFNNLDFKFLSCMCSS*ALPLQQ
Trigger: CTGTTGAAGAGGCAAAGCGCAGGAAGAGCACATGCA...AGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp GTCTGCCCTCTACATGGACCTTCCAGAATCTTTCTGCAATGTGATCATGCTCTGAGGATGAGTTGCATATaGTCCAAAAATCTGATTATC +
Preference number: 4 (lower is better)
Translates to: VCPLHGPSRIFLQCDHALRMSCI*SKNLII
Trigger: GATAATCAGATTTTTGGAGCATATGCAACTCATCCT...CAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTCCATGTAGAGGGCAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTCTTTCTTCAATGTCTaGCCTCTACATGGACCTTCC +
Preference number: 4 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFSFFNV*PLHGPS
Trigger: GGAAGGTCCATGTAGAGGGCAGACATTGAAGAAAGA...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp AGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTTTCAAGCAATTCTCCTaGCTCAGCCTCCCGAGTAGG +
Preference number: 4 (lower is better)
Translates to: RKWEYKVFSTTWILSFFLFKQFS*LSLPSR
Trigger: CCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAA...AAGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp TGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTTTACCCAGGATAGAGTaGAGTGGCACGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: WRKWEYKVFSTTWILSFFLPRIE*SGTILA
Trigger: AGCCAAGATCGTGCCACTGCACTCTATCCTGGGTAA...AAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp GAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTGAAGAAACATTTGGTTaGCTCCTCCCACCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: EEVGVQSLFNNLDFKFLSEETFG*LLPPKS
Trigger: GGACTTGGGTGGGAGGAGGCAACCAAATGTTTCTTC...AGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR CCA 90 bp GTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAGAGTTTAGGGTGTCCTaGTTTCCAGCAGTGTATTCC +
Preference number: 4 (lower is better)
Translates to: VWIWRKWEYKVFSTTWILEFRVS*FPAVYS
Trigger: GGAATACACTGCTGGAAACCAGGACACCCTAAACTC...TAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp TGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTGAGTTTAGGGTGTCCTaGTTTCCAGCAGTGTATTCC +
Preference number: 4 (lower is better)
Translates to: CMDLEEVGVQSLFNNLDFEFRVS*FPAVYS
Trigger: GGAATACACTGCTGGAAACCAGGACACCCTAAACTC...AAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTATAGCCTTAAGGTACTaGAAGGAGAGTTGGCATCTG +
Preference number: 4 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFIALRY*KESWHL
Trigger: CAGATGCCAACTCTCCTTCCAGTACCTTAAGGCTAT...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp ATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGCCATTCTCCAGGCGATaGCAAGGCATCTTTGATCTT +
Preference number: 4 (lower is better)
Translates to: MDLEEVGVQSLFNNLDFKPFSRR*QGIFDL
Trigger: AAGATCAAAGATGCCTTGCCATCGCCTGGAGAATGG...CTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229634.13
CDS-3UTR CCA 90 bp AGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTACTGTGGGAGAACCATaGGATGTCTCCCTAGAGGAG +
Preference number: 4 (lower is better)
Translates to: RKWEYKVFSTTWILSFFLTVGEP*DVSLEE
Trigger: CTCCTCTAGGGAGACATCCCATGGTTCTCCCACAGT...AAGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTTTCTTTCGTTCCTCTaGGTCAAGAGAAAGGCACTC +
Preference number: 4 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFFLSFL*VKRKAL
Trigger: GAGTGCCTTTCTCTTGACCCAGAGGAACGAAAGAAA...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp TGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTTATTGCCCTCAGTTATaGGATCACCCGCCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: WRKWEYKVFSTTWILSFFYCPQL*DHPPGK
Trigger: TTTCCCAGGCGGGTGATCCCATAACTGAGGGCAATA...AAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp ATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGCACCCAGGTCTTATCTaGCTCTTTATTGCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: MDLEEVGVQSLFNNLDFKHPGLI*LFIALS
Trigger: ACTGAGGGCAATAAAGAGCCAGATAAGACCTGGGTG...CTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp TCTGGATATGCTCTCACAATTATAGTATCATGGACTAAACTAGGTCAGAGTGAAAGCAAACCAGTACTCTaGCTGCTTTCTCCGTTTGCC +
Preference number: 4 (lower is better)
Translates to: SGYALTIIVSWTKLGQSESKPVL*LLSPFA
Trigger: GGCAAACGGAGAAAGCAGCCAGAGTACTGGTTTGCT...TTCACTCTGACCTAGTTTAGTCCATGATACTATAATTGTGAGAGCATATCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp CATATATCTATAAACACTCTGATTCCTCACTGTATGGATTTGGAGGAAGTGGGACCAGCTCTTGGTTGTTaGCTCACTGAAGAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: HISINTLIPHCMDLEEVGPALGC*LTEEVV
Trigger: GACAACTTCTTCAGTGAGCCAACAACCAAGAGCTGG...TCCCACTTCCTCCAAATCCATACAGTGAGGAATCAGAGTGTTTATAGATATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp GTCTGCCCTCTACATGGACCTTCCAGAATCTTTCTGCAATGTGATCATGCTCTGAGAAACCAAGACAATTaGTCCAATTTGACGTTTTTC +
Preference number: 4 (lower is better)
Translates to: VCPLHGPSRIFLQCDHALRNQDN*SNLTFF
Trigger: GAAAAACGTCAAATTGGACCAATTGTCTTGGTTTCT...CAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTCCATGTAGAGGGCAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp TGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTCCATGTTGGCCAGACTaGTCTCAAACTTGTGACCTT +
Preference number: 4 (lower is better)
Translates to: CMDLEEVGVQSLFNNLDFPCWPD*SQTCDL
Trigger: AAGGTCACAAGTTTGAGACCAGTCTGGCCAACATGG...AAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp CATATATCTATAAACACTCTGATTCCTCACTGTATGGATTTGGAGGAAGTGGGACCATGTTGGCCAGACTaGTCTCAAACTTGTGACCTT +
Preference number: 4 (lower is better)
Translates to: HISINTLIPHCMDLEEVGPCWPD*SQTCDL
Trigger: AAGGTCACAAGTTTGAGACCAGTCTGGCCAACATGG...TCCCACTTCCTCCAAATCCATACAGTGAGGAATCAGAGTGTTTATAGATATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp ATACAGATATATAGATATATGCTGCTTAAGACCTATCACCCTAAACAATCAGGGGCAGTGGCACGATCTTaGCTCACTACAACCTCTGCT +
Preference number: 4 (lower is better)
Translates to: IQIYRYMLLKTYHPKQSGAVARS*LTTTSA
Trigger: AGCAGAGGTTGTAGTGAGCCAAGATCGTGCCACTGC...CCCTGATTGTTTAGGGTGATAGGTCTTAAGCAGCATATATCTATATATCTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp GAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTTGGTTTTCCCACTTTaGTGCACAGGAACATGGGTG +
Preference number: 4 (lower is better)
Translates to: EEVGVQSLFNNLDFKFLSLVFPL*CTGTWV
Trigger: CACCCATGTTCCTGTGCATCAAAGTGGGAAAACCAA...AGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR TCA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTACATCGGGAGACCACTaGACAAAGAATGTGTACAAA +
Preference number: 4 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFTSGDH*TKNVYK
Trigger: TTTGTACACATTCTTTGTTCAGTGGTCTCCCGATGT...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR TCA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTGGTTGTTGGCTCACTaGAGAAGTTGTCAATCATGT +
Preference number: 4 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFWLLAH*RSCQSC
Trigger: ACATGATTGACAACTTCTTCAGTGAGCCAACAACCA...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR TCA 90 bp GTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTACACACCTCCAGATCCTaGACTATGAAGTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: VWIWRKWEYKVFSTTWILHTSRS*TMKSSF
Trigger: AAAGGAAGACTTCATAGTTCAGGATCTGGAGGTGTG...TAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp ATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGGATCATGCTCTGAGATaGTGGCAGAAAGGAAGCATT +
Preference number: 4 (lower is better)
Translates to: MDLEEVGVQSLFNNLDFKDHALR*WQKGSI
Trigger: AATGCTTCCTTTCTGCCATCATCTCAGAGCATGATC...CTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp GTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTATGGCGGCGGATGTTGTaGGCAAGTTCATTACAAATT +
Preference number: 4 (lower is better)
Translates to: VWIWRKWEYKVFSTTWILWRRML*ASSLQI
Trigger: AATTTGTAATGAACTTGCTCACAACATCCGCCGCCA...TAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368357.7
CDS-3UTR TCA 90 bp ATACAGATATATAGATATATGCTGCTTAAGACCTATCACCCTAAACAATCAGGGAGAGGACAAAGATCCTaGGGTAGGTCAGATGGCAAG +
Preference number: 4 (lower is better)
Translates to: IQIYRYMLLKTYHPKQSGRGQRS*GRSDGK
Trigger: CTTGCCATCTGACCTACCTCAGGATCTTTGTCCTCT...CCCTGATTGTTTAGGGTGATAGGTCTTAAGCAGCATATATCTATATATCTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR TCA 90 bp AGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTCTCAGTAGGAGAACTTaGGTGAAACGTACACCCAGG +
Preference number: 4 (lower is better)
Translates to: RKWEYKVFSTTWILSFFLLSRRT*VKRTPR
Trigger: CCTGGGTGTACGTTTCACTCAAGTTCTCCTACTGAG...AAGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp AGGATGTCTCTGGTGGCTTGTAGCACGGGGATGCATCTAATCATTTTCAGTAGATCTGGCATTATATCTTaGTTCTCACAGGTTTCTAAA +
Preference number: 4 (lower is better)
Translates to: RMSLVACSTGMHLIIFSRSGIIS*FSQVSK
Trigger: TTTAGAAACCTGTGAGAAGCAAGATATAATGCCAGA...TCTACTGAAAATGATTAGATGCATCCCCGTGCTACAAGCCACCAGAGACATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR GCA 90 bp ATACAGATATATAGATATATGCTGCTTAAGACCTATCACCCTAAACAATCAGGGAACCAGTACTCTGGCTaGTTTCTCCGTTTGCCGTAC +
Preference number: 4 (lower is better)
Translates to: IQIYRYMLLKTYHPKQSGNQYSG*FLRLPY
Trigger: GTACGGCAAACGGAGAAAGCAGCCAGAGTACTGGTT...CCCTGATTGTTTAGGGTGATAGGTCTTAAGCAGCATATATCTATATATCTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR GCA 90 bp TCTGGATATGCTCTCACAATTATAGTATCATGGACTAAACTAGGTCAGAGTGAAGCTCTTCCTGCGCTTTaGCTCTTCAACAGTGATGAT +
Preference number: 4 (lower is better)
Translates to: SGYALTIIVSWTKLGQSEALPAL*LFNSDD
Trigger: ATCATCACTGTTGAAGAGGCAAAGCGCAGGAAGAGC...TTCACTCTGACCTAGTTTAGTCCATGATACTATAATTGTGAGAGCATATCCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp CTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACAATTATAGTATCACATAGTAGCTGCATGTaGTCTTCCTGCGCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: LFYIENTASGYALTIIVSHSSCM*SSCALP
Trigger: AGGCAAAGCGCAGGAAGAGCACATGCAGCTACTATG...TGATACTATAATTGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp AGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTCATAGTAGCTGCATGTaGTCTTCCTGCGCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: RKWEYKVFSTTWILSFFLHSSCM*SSCALP
Trigger: AGGCAAAGCGCAGGAAGAGCACATGCAGCTACTATG...AAGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp ATTAAGGGAAGACATACTTATAATAGTGCAGGATGTCTCTGGTGGCTTGTAGCACTTCCACAGCAATGTTaGACTTGTCTGGCTCTAAAA +
Preference number: 4 (lower is better)
Translates to: IKGRHTYNSAGCLWWLVALPQQC*TCLALK
Trigger: TTTTAGAGCCAGACAAGTGCAACATTGCTGTGGAAG...TGCTACAAGCCACCAGAGACATCCTGCACTATTATAAGTATGTCTTCCCTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR GCA 90 bp ATACAGATATATAGATATATGCTGCTTAAGACCTATCACCCTAAACAATCAGGGTTACCCAGGATAGAGTaGAGTGGCACGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: IQIYRYMLLKTYHPKQSGLPRIE*SGTILA
Trigger: AGCCAAGATCGTGCCACTGCACTCTATCCTGGGTAA...CCCTGATTGTTTAGGGTGATAGGTCTTAAGCAGCATATATCTATATATCTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp TGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTGGCACAAAAAGGACCTaGCCTGGAACAATAGTATGT +
Preference number: 4 (lower is better)
Translates to: CMDLEEVGVQSLFNNLDFGTKRT*PGTIVC
Trigger: ACATACTATTGTTCCAGGCCAGGTCCTTTTTGTGCC...AAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp GTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAATAGCCTTAAGGTACTaGAAGGAGAGTTGGCATCTG +
Preference number: 4 (lower is better)
Translates to: VWIWRKWEYKVFSTTWILIALRY*KESWHL
Trigger: CAGATGCCAACTCTCCTTCCAGTACCTTAAGGCTAT...TAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp ATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGCATTGTAGAGCGCAATaGAAACAACCTCTTCCATGG +
Preference number: 4 (lower is better)
Translates to: MDLEEVGVQSLFNNLDFKHCRAQ*KQPLPW
Trigger: CCATGGAAGAGGTTGTTTCCATTGCGCTCTACAATG...CTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp GAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTCACCCAGGTCTTATCTaGCTCTTTATTGCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: EEVGVQSLFNNLDFKFLSHPGLI*LFIALS
Trigger: ACTGAGGGCAATAAAGAGCCAGATAAGACCTGGGTG...AGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp GAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTGCAATGAAGACTGCTTaGGGTCTTCATCTAGCCCAA +
Preference number: 4 (lower is better)
Translates to: EEVGVQSLFNNLDFKFLSAMKTA*GLHLAQ
Trigger: TTGGGCTAGATGAAGACCCCAAGCAGTCTTCATTGC...AGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR CCA 90 bp GTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTATCCAAGGGTAATCTTTaGCCTCTCATTGTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: VWIWRKWEYKVFSTTWILSKGNL*PLIVSS
Trigger: ACTGCTCACAATGAGAGGCCAAAGATTACCCTTGGA...TAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp GAATGGACAATACTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACAGCTCTTCGTCAGGTCTaGCACAATAGAAAATCTGGA +
Preference number: 4 (lower is better)
Translates to: EWTILFYIENTASGYALTALRQV*HNRKSG
Trigger: TCCAGATTTTCTATTGTGCCAGACCTGACGAAGAGC...TGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAGTATTGTCCATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp AAAACTTTAAAAGGCATCAAGGAGAGGGAGATCAAATTAAGGGAAGACATACTTCCTCTTTTTAATCAGTaGGTCGTAACCCTACAGGGC +
Preference number: 4 (lower is better)
Translates to: KTLKGIKEREIKLREDILPLFNQ*VVTLQG
Trigger: GCCCTGTAGGGTTACGACTCACTGATTAAAAAGAGG...AAGTATGTCTTCCCTTAATTTGATCTCCCTCTCCTTGATGCCTTTTAAAGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR TCA 90 bp GAATGGACAATACTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACACACCCTTTCCATCGGTaGAGTATCGACAATTCATTT +
Preference number: 4 (lower is better)
Translates to: EWTILFYIENTASGYALTHPFHR*SIDNSF
Trigger: AAATGAATTGTCGATACTTCACCGATGGAAAGGGTG...TGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAGTATTGTCCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR TCA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTAGAGGATCAGATTTATaGGGGTCAAACATGATGTTG +
Preference number: 4 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFRGSDL*GSNMML
Trigger: CAACATCATGTTTGACCCTCATAAATCTGATCCTCT...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR TCA 90 bp AGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTTCCATTTGTGCACCTTaGCAGCTGTTGTCCAGAGTA +
Preference number: 4 (lower is better)
Translates to: RKWEYKVFSTTWILSFFLSICAP*QLLSRV
Trigger: TACTCTGGACAACAGCTGTCAAGGTGCACAAATGGA...AAGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR TCA 90 bp CTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACAATTATAGTATCATCCATTTGTGCACCTTaGCAGCTGTTGTCCAGAGTA +
Preference number: 4 (lower is better)
Translates to: LFYIENTASGYALTIIVSSICAP*QLLSRV
Trigger: TACTCTGGACAACAGCTGTCAAGGTGCACAAATGGA...TGATACTATAATTGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR TCA 90 bp CTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACAATTATAGTATCATTGGTTTTCCCACTTTaGTGCACAGGAACATGGGTG +
Preference number: 4 (lower is better)
Translates to: LFYIENTASGYALTIIVSLVFPL*CTGTWV
Trigger: CACCCATGTTCCTGTGCATCAAAGTGGGAAAACCAA...TGATACTATAATTGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR TCA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTCCAGATCCTGAACTATaGAGTCTTCCTTTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFPDPEL*SLPFWK
Trigger: TTTCCAAAAAGGAAGACTTCATAGTTCAGGATCTGG...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp TCTGGATATGCTCTCACAATTATAGTATCATGGACTAAACTAGGTCAGAGTGAACACACCTCCAGATCCTaGACTATGAAGTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: SGYALTIIVSWTKLGQSEHTSRS*TMKSSF
Trigger: AAAGGAAGACTTCATAGTTCAGGATCTGGAGGTGTG...TTCACTCTGACCTAGTTTAGTCCATGATACTATAATTGTGAGAGCATATCCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp TCTGGATATGCTCTCACAATTATAGTATCATGGACTAAACTAGGTCAGAGTGAAGATCATGCTCTGAGATaGTGGCAGAAAGGAAGCATT +
Preference number: 4 (lower is better)
Translates to: SGYALTIIVSWTKLGQSEDHALR*WQKGSI
Trigger: AATGCTTCCTTTCTGCCATCATCTCAGAGCATGATC...TTCACTCTGACCTAGTTTAGTCCATGATACTATAATTGTGAGAGCATATCCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp ATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGAATGTGATCATGCTCTaGGATGATGGCAGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: MDLEEVGVQSLFNNLDFKNVIML*DDGRKE
Trigger: TTCCTTTCTGCCATCATCTCAGAGCATGATCACATT...CTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp AGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTTCTTCCTTCCCAGTATaGGTCCTTGTAGCTACAGCT +
Preference number: 4 (lower is better)
Translates to: RKWEYKVFSTTWILSFFLSSFPV*VLVATA
Trigger: AGCTGTAGCTACAAGGACTCATACTGGGAAGGAAGA...AAGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR TCA 90 bp TGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTGAGTATAATAATTGTTaGTCTGACAGGAGGCCACTG +
Preference number: 4 (lower is better)
Translates to: CMDLEEVGVQSLFNNLDFEYNNC*SDRRPL
Trigger: CAGTGGCCTCCTGTCAGATCAACAATTATTATACTC...AAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp GAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTGGCTGTAGATTCAAATaGAGAAGAAGTGTCGGAAGG +
Preference number: 4 (lower is better)
Translates to: EEVGVQSLFNNLDFKFLSGCRFK*RRSVGR
Trigger: CCTTCCGACACTTCTTCTGCATTTGAATCTACAGCC...AGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR GCA 90 bp GAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTACCACCACAAAGCCTTaGTCTTTGGCATCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: EEVGVQSLFNNLDFKFLSTTTKP*SLASFP
Trigger: TGGAAAAGATGCCAAAGAGCAAGGCTTTGTGGTGGT...AGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR GCA 90 bp GTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAAGTGCTGCAAGAGTTaGTTCGTCCGTGGTATAAAT +
Preference number: 4 (lower is better)
Translates to: VWIWRKWEYKVFSTTWILKCCKS*FVRGIN
Trigger: ATTTATACCACGGACGAAGCAACTCTTGCAGCACTT...TAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp ATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGAAGTGCTGCAAGAGTTaGTTCGTCCGTGGTATAAAT +
Preference number: 4 (lower is better)
Translates to: MDLEEVGVQSLFNNLDFKKCCKS*FVRGIN
Trigger: ATTTATACCACGGACGAAGCAACTCTTGCAGCACTT...CTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp ATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGCTTCCACAGCAATGTTaGACTTGTCTGGCTCTAAAA +
Preference number: 4 (lower is better)
Translates to: MDLEEVGVQSLFNNLDFKLPQQC*TCLALK
Trigger: TTTTAGAGCCAGACAAGTGCAACATTGCTGTGGAAG...CTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR GCA 90 bp TCCTCCCACCCAAGTCCTTTGATATGGACTTATGAACTGAGGAATTATGAAGCACACAGCATCTGGATATaGTCTCACAATTATAGTATC +
Preference number: 4 (lower is better)
Translates to: SSHPSPLIWTYELRNYEAHSIWI*SHNYSI
Trigger: GATACTATAATTGTGAGAGCATATCCAGATGCTGTG...TGCTTCATAATTCCTCAGTTCATAAGTCCATATCAAAGGACTTGGGTGGGAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR CCA 90 bp AGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTGAGTTTAGGGTGTCCTaGTTTCCAGCAGTGTATTCC +
Preference number: 4 (lower is better)
Translates to: RKWEYKVFSTTWILSFFLEFRVS*FPAVYS
Trigger: GGAATACACTGCTGGAAACCAGGACACCCTAAACTC...AAGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp ATTAAGGGAAGACATACTTATAATAGTGCAGGATGTCTCTGGTGGCTTGTAGCAAAAAAGGACCTGGCCTaGAACAATAGTATGTGTGAA +
Preference number: 4 (lower is better)
Translates to: IKGRHTYNSAGCLWWLVAKKDLA*NNSMCE
Trigger: TTCACACATACTATTGTTCCAGGCCAGGTCCTTTTT...TGCTACAAGCCACCAGAGACATCCTGCACTATTATAAGTATGTCTTCCCTTAAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR CCA 90 bp GAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTACTGGAAGGAGAGTTaGCATCTGGCACAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: EEVGVQSLFNNLDFKFLSYWKES*HLAQKG
Trigger: TCCTTTTTGTGCCAGATGCCAACTCTCCTTCCAGTA...AGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp TGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTTACTGGAAGGAGAGTTaGCATCTGGCACAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: WRKWEYKVFSTTWILSFFYWKES*HLAQKG
Trigger: TCCTTTTTGTGCCAGATGCCAACTCTCCTTCCAGTA...AAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp GAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTCATTGTAGAGCGCAATaGAAACAACCTCTTCCATGG +
Preference number: 4 (lower is better)
Translates to: EEVGVQSLFNNLDFKFLSHCRAQ*KQPLPW
Trigger: CCATGGAAGAGGTTGTTTCCATTGCGCTCTACAATG...AGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp TGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTCTCCAAAGGTACTATTaGTCTGGAATCCGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: CMDLEEVGVQSLFNNLDFLQRYY*SGIRSH
Trigger: ATGACTTCGGATTCCAGACCAATAGTACCTTTGGAG...AAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp ATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGCTCCAAAGGTACTATTaGTCTGGAATCCGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: MDLEEVGVQSLFNNLDFKLQRYY*SGIRSH
Trigger: ATGACTTCGGATTCCAGACCAATAGTACCTTTGGAG...CTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp GTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTACTCCAAAGGTACTATTaGTCTGGAATCCGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: VWIWRKWEYKVFSTTWILLQRYY*SGIRSH
Trigger: ATGACTTCGGATTCCAGACCAATAGTACCTTTGGAG...TAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp GAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTTTCTTTCGTTCCTCTaGGTCAAGAGAAAGGCACTC +
Preference number: 4 (lower is better)
Translates to: EEVGVQSLFNNLDFKFLSFLSFL*VKRKAL
Trigger: GAGTGCCTTTCTCTTGACCCAGAGGAACGAAAGAAA...AGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp TCTGGATATGCTCTCACAATTATAGTATCATGGACTAAACTAGGTCAGAGTGAATTTCTTTCGTTCCTCTaGGTCAAGAGAAAGGCACTC +
Preference number: 4 (lower is better)
Translates to: SGYALTIIVSWTKLGQSEFLSFL*VKRKAL
Trigger: GAGTGCCTTTCTCTTGACCCAGAGGAACGAAAGAAA...TTCACTCTGACCTAGTTTAGTCCATGATACTATAATTGTGAGAGCATATCCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp TCTGGATATGCTCTCACAATTATAGTATCATGGACTAAACTAGGTCAGAGTGAATGGCTGCAGTGTGAGTaGCAAAGGATTTTCTCATTG +
Preference number: 4 (lower is better)
Translates to: SGYALTIIVSWTKLGQSEWLQCE*QRIFSL
Trigger: CAATGAGAAAATCCTTTGCCACTCACACTGCAGCCA...TTCACTCTGACCTAGTTTAGTCCATGATACTATAATTGTGAGAGCATATCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp ATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGCTCACTGTATGGATTTaGAGGAAGTGGGAGTACAAA +
Preference number: 4 (lower is better)
Translates to: MDLEEVGVQSLFNNLDFKLTVWI*RKWEYK
Trigger: TTTGTACTCCCACTTCCTCCAAATCCATACAGTGAG...CTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp TGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTTCCAAGGGTAATCTTTaGCCTCTCATTGTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: WRKWEYKVFSTTWILSFFSKGNL*PLIVSS
Trigger: ACTGCTCACAATGAGAGGCCAAAGATTACCCTTGGA...AAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp TGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCACCCTTTCCATCGGTaGAGTATCGACAATTCATTT +
Preference number: 4 (lower is better)
Translates to: WRKWEYKVFSTTWILSFFHPFHR*SIDNSF
Trigger: AAATGAATTGTCGATACTTCACCGATGGAAAGGGTG...AAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR TCA 90 bp TCTGGATATGCTCTCACAATTATAGTATCATGGACTAAACTAGGTCAGAGTGAACACCCTTTCCATCGGTaGAGTATCGACAATTCATTT +
Preference number: 4 (lower is better)
Translates to: SGYALTIIVSWTKLGQSEHPFHR*SIDNSF
Trigger: AAATGAATTGTCGATACTTCACCGATGGAAAGGGTG...TTCACTCTGACCTAGTTTAGTCCATGATACTATAATTGTGAGAGCATATCCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR TCA 90 bp GAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTATTCCACCACCAGTTTaGGAAGAAAGTTCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: EEVGVQSLFNNLDFKFLSIPPPV*EESSSK
Trigger: CTTGGAAGAACTTTCTTCTCAAACTGGTGGTGGAAT...AGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR TCA 90 bp TGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTCTGAACTTGAAAGGATaGGTTGCATATGCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: CMDLEEVGVQSLFNNLDFLNLKG*VAYAPK
Trigger: TTTTGGAGCATATGCAACTCATCCTTTCAAGTTCAG...AAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp ATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGCTGAACTTGAAAGGATaGGTTGCATATGCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: MDLEEVGVQSLFNNLDFKLNLKG*VAYAPK
Trigger: TTTTGGAGCATATGCAACTCATCCTTTCAAGTTCAG...CTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp CATATATCTATAAACACTCTGATTCCTCACTGTATGGATTTGGAGGAAGTGGGACCAGATCCTGAACTATaGAGTCTTCCTTTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: HISINTLIPHCMDLEEVGPDPEL*SLPFWK
Trigger: TTTCCAAAAAGGAAGACTTCATAGTTCAGGATCTGG...TCCCACTTCCTCCAAATCCATACAGTGAGGAATCAGAGTGTTTATAGATATATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp ATACAGATATATAGATATATGCTGCTTAAGACCTATCACCCTAAACAATCAGGGCACACCTCCAGATCCTaGACTATGAAGTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: IQIYRYMLLKTYHPKQSGHTSRS*TMKSSF
Trigger: AAAGGAAGACTTCATAGTTCAGGATCTGGAGGTGTG...CCCTGATTGTTTAGGGTGATAGGTCTTAAGCAGCATATATCTATATATCTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp CTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACAATTATAGTATCAGATCATGCTCTGAGATaGTGGCAGAAAGGAAGCATT +
Preference number: 4 (lower is better)
Translates to: LFYIENTASGYALTIIVSDHALR*WQKGSI
Trigger: AATGCTTCCTTTCTGCCATCATCTCAGAGCATGATC...TGATACTATAATTGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp GAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTAATGTGATCATGCTCTaGGATGATGGCAGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: EEVGVQSLFNNLDFKFLSNVIML*DDGRKE
Trigger: TTCCTTTCTGCCATCATCTCAGAGCATGATCACATT...AGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp GAATGGACAATACTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACAAATCTTTCTGCAATGTaGTCATGCTCTGAGATGATG +
Preference number: 4 (lower is better)
Translates to: EWTILFYIENTASGYALTNLSAM*SCSEMM
Trigger: CATCATCTCAGAGCATGATCACATTGCAGAAAGATT...TGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAGTATTGTCCATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp GAATGGACAATACTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACAAATGTACGCTTTTATTaGCTAAATGGAAAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: EWTILFYIENTASGYALTNVRFY*LNGKLA
Trigger: GGCCAGCTTTCCATTTAGTCAATAAAAGCGTACATT...TGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAGTATTGTCCATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp GTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAATGTACGCTTTTATTaGCTAAATGGAAAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: VWIWRKWEYKVFSTTWILNVRFY*LNGKLA
Trigger: GGCCAGCTTTCCATTTAGTCAATAAAAGCGTACATT...TAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp CATATATCTATAAACACTCTGATTCCTCACTGTATGGATTTGGAGGAAGTGGGAAATGTACGCTTTTATTaGCTAAATGGAAAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: HISINTLIPHCMDLEEVGNVRFY*LNGKLA
Trigger: GGCCAGCTTTCCATTTAGTCAATAAAAGCGTACATT...TCCCACTTCCTCCAAATCCATACAGTGAGGAATCAGAGTGTTTATAGATATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTGTAAACGTGATATCATaGGACATTCCTGATATCTCA +
Preference number: 4 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFVNVIS*DIPDIS
Trigger: TGAGATATCAGGAATGTCTCATGATATCACGTTTAC...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp TGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTCCCTTACGGAAATTATaGAGTAGGTTAAGACAGATG +
Preference number: 4 (lower is better)
Translates to: CMDLEEVGVQSLFNNLDFPLRKL*SRLRQM
Trigger: CATCTGTCTTAACCTACTTCATAATTTCCGTAAGGG...AAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR GCA 90 bp AGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTGGCTGTAGATTCAAATaGAGAAGAAGTGTCGGAAGG +
Preference number: 4 (lower is better)
Translates to: RKWEYKVFSTTWILSFFLGCRFK*RRSVGR
Trigger: CCTTCCGACACTTCTTCTGCATTTGAATCTACAGCC...AAGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR GCA 90 bp TCTGGATATGCTCTCACAATTATAGTATCATGGACTAAACTAGGTCAGAGTGAATATCTGGCTCTTTATTaGCCTCAGTTATGGGATCAC +
Preference number: 4 (lower is better)
Translates to: SGYALTIIVSWTKLGQSEYLALY*PQLWDH
Trigger: GTGATCCCATAACTGAGGGCAATAAAGAGCCAGATA...TTCACTCTGACCTAGTTTAGTCCATGATACTATAATTGTGAGAGCATATCCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR GCA 90 bp ATACAGATATATAGATATATGCTGCTTAAGACCTATCACCCTAAACAATCAGGGACCACCACAAAGCCTTaGTCTTTGGCATCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: IQIYRYMLLKTYHPKQSGTTTKP*SLASFP
Trigger: TGGAAAAGATGCCAAAGAGCAAGGCTTTGTGGTGGT...CCCTGATTGTTTAGGGTGATAGGTCTTAAGCAGCATATATCTATATATCTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp ATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGAAAAAGGACCTGGCCTaGAACAATAGTATGTGTGAA +
Preference number: 4 (lower is better)
Translates to: MDLEEVGVQSLFNNLDFKKKDLA*NNSMCE
Trigger: TTCACACATACTATTGTTCCAGGCCAGGTCCTTTTT...CTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp ATACAGATATATAGATATATGCTGCTTAAGACCTATCACCCTAAACAATCAGGGGGCACAAAAAGGACCTaGCCTGGAACAATAGTATGT +
Preference number: 4 (lower is better)
Translates to: IQIYRYMLLKTYHPKQSGGTKRT*PGTIVC
Trigger: ACATACTATTGTTCCAGGCCAGGTCCTTTTTGTGCC...CCCTGATTGTTTAGGGTGATAGGTCTTAAGCAGCATATATCTATATATCTGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp AGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTTACTGGAAGGAGAGTTaGCATCTGGCACAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: RKWEYKVFSTTWILSFFLYWKES*HLAQKG
Trigger: TCCTTTTTGTGCCAGATGCCAACTCTCCTTCCAGTA...AAGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp GTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAAATTTCACCACACCTaGCTCATCTTCTTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: VWIWRKWEYKVFSTTWILKFHHT*LIFFRS
Trigger: ACTTCTGAAGAAGATGAGCCAGGTGTGGTGAAATTT...TAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp ATACAGATATATAGATATATGCTGCTTAAGACCTATCACCCTAAACAATCAGGGCATTGTAGAGCGCAATaGAAACAACCTCTTCCATGG +
Preference number: 4 (lower is better)
Translates to: IQIYRYMLLKTYHPKQSGHCRAQ*KQPLPW
Trigger: CCATGGAAGAGGTTGTTTCCATTGCGCTCTACAATG...CCCTGATTGTTTAGGGTGATAGGTCTTAAGCAGCATATATCTATATATCTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTATTTTCAGATACCTGTaGCCCTTCTTTGTTCTTAGT +
Preference number: 4 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFIFRYL*PFFVLS
Trigger: ACTAAGAACAAAGAAGGGCCACAGGTATCTGAAAAT...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp AGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTGAGTTGCTTCGTCCGTaGTATAAATCAGCATCTAGC +
Preference number: 4 (lower is better)
Translates to: RKWEYKVFSTTWILSFFLELLRP*YKSASS
Trigger: GCTAGATGCTGATTTATACCACGGACGAAGCAACTC...AAGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp CTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACAATTATAGTATCAGAGTTGCTTCGTCCGTaGTATAAATCAGCATCTAGC +
Preference number: 4 (lower is better)
Translates to: LFYIENTASGYALTIIVSELLRP*YKSASS
Trigger: GCTAGATGCTGATTTATACCACGGACGAAGCAACTC...TGATACTATAATTGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp ATACAGATATATAGATATATGCTGCTTAAGACCTATCACCCTAAACAATCAGGGGAGTTGCTTCGTCCGTaGTATAAATCAGCATCTAGC +
Preference number: 4 (lower is better)
Translates to: IQIYRYMLLKTYHPKQSGELLRP*YKSASS
Trigger: GCTAGATGCTGATTTATACCACGGACGAAGCAACTC...CCCTGATTGTTTAGGGTGATAGGTCTTAAGCAGCATATATCTATATATCTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp AGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTCGGAGCGAAGTCTCTTaGGTCAGATTTCTTCAACTA +
Preference number: 4 (lower is better)
Translates to: RKWEYKVFSTTWILSFFLRSEVS*VRFLQL
Trigger: TAGTTGAAGAAATCTGACCCAAGAGACTTCGCTCCG...AAGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368357.7
CDS-3UTR CCA 90 bp ATACAGATATATAGATATATGCTGCTTAAGACCTATCACCCTAAACAATCAGGGACTGATGATCATGTGTaGAGGGATACGAGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: IQIYRYMLLKTYHPKQSGTDDHV*RDTSSH
Trigger: ATGGCTACTCGTATCCCTCCACACATGATCATCAGT...CCCTGATTGTTTAGGGTGATAGGTCTTAAGCAGCATATATCTATATATCTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368357.7
CDS-3UTR CCA 90 bp TCTGGATATGCTCTCACAATTATAGTATCATGGACTAAACTAGGTCAGAGTGAACTCACTGTATGGATTTaGAGGAAGTGGGAGTACAAA +
Preference number: 4 (lower is better)
Translates to: SGYALTIIVSWTKLGQSELTVWI*RKWEYK
Trigger: TTTGTACTCCCACTTCCTCCAAATCCATACAGTGAG...TTCACTCTGACCTAGTTTAGTCCATGATACTATAATTGTGAGAGCATATCCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp AGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTCTGACAGGAGGCCACTaGACAATTTGTTCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: RKWEYKVFSTTWILSFFLLTGGH*TICSLS
Trigger: TGAAAGAGAACAAATTGTCCAGTGGCCTCCTGTCAG...AAGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp TGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTAGAGGATCAGATTTATaGGGGTCAAACATGATGTTG +
Preference number: 4 (lower is better)
Translates to: WRKWEYKVFSTTWILSFFRGSDL*GSNMML
Trigger: CAACATCATGTTTGACCCTCATAAATCTGATCCTCT...AAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR TCA 90 bp AGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTATTCCACCACCAGTTTaGGAAGAAAGTTCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: RKWEYKVFSTTWILSFFLIPPPV*EESSSK
Trigger: CTTGGAAGAACTTTCTTCTCAAACTGGTGGTGGAAT...AAGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR TCA 90 bp AGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTACATCGGGAGACCACTaGACAAAGAATGTGTACAAA +
Preference number: 4 (lower is better)
Translates to: RKWEYKVFSTTWILSFFLTSGDH*TKNVYK
Trigger: TTTGTACACATTCTTTGTTCAGTGGTCTCCCGATGT...AAGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR TCA 90 bp AGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTTGGTTGTTGGCTCACTaGAGAAGTTGTCAATCATGT +
Preference number: 4 (lower is better)
Translates to: RKWEYKVFSTTWILSFFLWLLAH*RSCQSC
Trigger: ACATGATTGACAACTTCTTCAGTGAGCCAACAACCA...AAGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR TCA 90 bp GAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTCTGAACTTGAAAGGATaGGTTGCATATGCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: EEVGVQSLFNNLDFKFLSLNLKG*VAYAPK
Trigger: TTTTGGAGCATATGCAACTCATCCTTTCAAGTTCAG...AGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp TGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCCAGATCCTGAACTATaGAGTCTTCCTTTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: WRKWEYKVFSTTWILSFFPDPEL*SLPFWK
Trigger: TTTCCAAAAAGGAAGACTTCATAGTTCAGGATCTGG...AAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp TGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTAATCTTTCTGCAATGTaGTCATGCTCTGAGATGATG +
Preference number: 4 (lower is better)
Translates to: WRKWEYKVFSTTWILSFFNLSAM*SCSEMM
Trigger: CATCATCTCAGAGCATGATCACATTGCAGAAAGATT...AAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp CATATATCTATAAACACTCTGATTCCTCACTGTATGGATTTGGAGGAAGTGGGACGGGGAAATAATTTATaGCAGACCATTTTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: HISINTLIPHCMDLEEVGRGNNL*QTIFQL
Trigger: AAGCTGAAAAATGGTCTGTCATAAATTATTTCCCCG...TCCCACTTCCTCCAAATCCATACAGTGAGGAATCAGAGTGTTTATAGATATATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp GAATGGACAATACTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACACGGGGAAATAATTTATaGCAGACCATTTTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: EWTILFYIENTASGYALTRGNNL*QTIFQL
Trigger: AAGCTGAAAAATGGTCTGTCATAAATTATTTCCCCG...TGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAGTATTGTCCATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp GTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAGTAAACGTGATATCATaGGACATTCCTGATATCTCA +
Preference number: 4 (lower is better)
Translates to: VWIWRKWEYKVFSTTWILVNVIS*DIPDIS
Trigger: TGAGATATCAGGAATGTCTCATGATATCACGTTTAC...TAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTCTGGCATTATATCTTaGTTCTCACAGGTTTCTAAA +
Preference number: 4 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFSGIIS*FSQVSK
Trigger: TTTAGAAACCTGTGAGAAGCAAGATATAATGCCAGA...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR GCA 90 bp AGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTTATCTGGCTCTTTATTaGCCTCAGTTATGGGATCAC +
Preference number: 4 (lower is better)
Translates to: RKWEYKVFSTTWILSFFLYLALY*PQLWDH
Trigger: GTGATCCCATAACTGAGGGCAATAAAGAGCCAGATA...AAGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR GCA 90 bp ATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTATTATCCATTTGTaGACCTTGACAGCTGTTGTC +
Preference number: 4 (lower is better)
Translates to: MDLEEVGVQSLFNNLDFKFIIHL*TLTAVV
Trigger: GACAACAGCTGTCAAGGTGCACAAATGGATAATAAA...CTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR GCA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTAGGATGAGTTGCATATaGTCCAAAAATCTGATTATC +
Preference number: 4 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFRMSCI*SKNLII
Trigger: GATAATCAGATTTTTGGAGCATATGCAACTCATCCT...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp AGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTAAGTGCTGCAAGAGTTaGTTCGTCCGTGGTATAAAT +
Preference number: 4 (lower is better)
Translates to: RKWEYKVFSTTWILSFFLKCCKS*FVRGIN
Trigger: ATTTATACCACGGACGAAGCAACTCTTGCAGCACTT...AAGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp CTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACAATTATAGTATCAAAGTGCTGCAAGAGTTaGTTCGTCCGTGGTATAAAT +
Preference number: 4 (lower is better)
Translates to: LFYIENTASGYALTIIVSKCCKS*FVRGIN
Trigger: ATTTATACCACGGACGAAGCAACTCTTGCAGCACTT...TGATACTATAATTGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp TCTGGATATGCTCTCACAATTATAGTATCATGGACTAAACTAGGTCAGAGTGAATATCTTACTGCCCTCTaGATCTACTTTATGAGGGTT +
Preference number: 4 (lower is better)
Translates to: SGYALTIIVSWTKLGQSEYLTAL*IYFMRV
Trigger: AACCCTCATAAAGTAGATGCAGAGGGCAGTAAGATA...TTCACTCTGACCTAGTTTAGTCCATGATACTATAATTGTGAGAGCATATCCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368357.7
CDS-3UTR CCA 90 bp GAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTATAAGACTCTTTCAATaGGTTTCAAGGCCTTTCGTG +
Preference number: 4 (lower is better)
Translates to: EEVGVQSLFNNLDFKFLSIRLFQ*VSRPFV
Trigger: CACGAAAGGCCTTGAAACCCATTGAAAGAGTCTTAT...AGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp TCTGGATATGCTCTCACAATTATAGTATCATGGACTAAACTAGGTCAGAGTGAAAAATTTCACCACACCTaGCTCATCTTCTTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: SGYALTIIVSWTKLGQSEKFHHT*LIFFRS
Trigger: ACTTCTGAAGAAGATGAGCCAGGTGTGGTGAAATTT...TTCACTCTGACCTAGTTTAGTCCATGATACTATAATTGTGAGAGCATATCCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp TGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTATTTTCAGATACCTGTaGCCCTTCTTTGTTCTTAGT +
Preference number: 4 (lower is better)
Translates to: CMDLEEVGVQSLFNNLDFIFRYL*PFFVLS
Trigger: ACTAAGAACAAAGAAGGGCCACAGGTATCTGAAAAT...AAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp GTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAATGTCTATTCCCCCTaGTTCAATACTTTTTCCATC +
Preference number: 4 (lower is better)
Translates to: VWIWRKWEYKVFSTTWILNVYSP*FNTFSI
Trigger: GATGGAAAAAGTATTGAACCAGGGGGAATAGACATT...TAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp AGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTCTCACTGTATGGATTTaGAGGAAGTGGGAGTACAAA +
Preference number: 4 (lower is better)
Translates to: RKWEYKVFSTTWILSFFLLTVWI*RKWEYK
Trigger: TTTGTACTCCCACTTCCTCCAAATCCATACAGTGAG...AAGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp ATACAGATATATAGATATATGCTGCTTAAGACCTATCACCCTAAACAATCAGGGCTCACTGTATGGATTTaGAGGAAGTGGGAGTACAAA +
Preference number: 4 (lower is better)
Translates to: IQIYRYMLLKTYHPKQSGLTVWI*RKWEYK
Trigger: TTTGTACTCCCACTTCCTCCAAATCCATACAGTGAG...CCCTGATTGTTTAGGGTGATAGGTCTTAAGCAGCATATATCTATATATCTGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTAGAAACCAAGACAATTaGTCCAATTTGACGTTTTTC +
Preference number: 4 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFRNQDN*SNLTFF
Trigger: GAAAAACGTCAAATTGGACCAATTGTCTTGGTTTCT...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp GAATGGACAATACTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACAAGAGAACACAGCATCTaGATATGCTCTCACAATTAT +
Preference number: 4 (lower is better)
Translates to: EWTILFYIENTASGYALTREHSI*ICSHNY
Trigger: ATAATTGTGAGAGCATATCCAGATGCTGTGTTCTCT...TGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAGTATTGTCCATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
3UTR CAA 72 bp ATATCTATAAACACTCTGATTCCTCACTGTATGGATTaGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAAC +
Preference number: 4 (lower is better)
Translates to: ISINTLIPHCMD*EEVGVQSLFNN
Trigger: GTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAGTGAGGAATCAGAGTGTTTATAGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp AGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTAATGTACGCTTTTATTaGCTAAATGGAAAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: RKWEYKVFSTTWILSFFLNVRFY*LNGKLA
Trigger: GGCCAGCTTTCCATTTAGTCAATAAAAGCGTACATT...AAGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp GAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTGTAAACGTGATATCATaGGACATTCCTGATATCTCA +
Preference number: 4 (lower is better)
Translates to: EEVGVQSLFNNLDFKFLSVNVIS*DIPDIS
Trigger: TGAGATATCAGGAATGTCTCATGATATCACGTTTAC...AGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp TCTGGATATGCTCTCACAATTATAGTATCATGGACTAAACTAGGTCAGAGTGAAGTAAACGTGATATCATaGGACATTCCTGATATCTCA +
Preference number: 4 (lower is better)
Translates to: SGYALTIIVSWTKLGQSEVNVIS*DIPDIS
Trigger: TGAGATATCAGGAATGTCTCATGATATCACGTTTAC...TTCACTCTGACCTAGTTTAGTCCATGATACTATAATTGTGAGAGCATATCCAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp CATATATCTATAAACACTCTGATTCCTCACTGTATGGATTTGGAGGAAGTGGGATCTGGCATTATATCTTaGTTCTCACAGGTTTCTAAA +
Preference number: 4 (lower is better)
Translates to: HISINTLIPHCMDLEEVGSGIIS*FSQVSK
Trigger: TTTAGAAACCTGTGAGAAGCAAGATATAATGCCAGA...TCCCACTTCCTCCAAATCCATACAGTGAGGAATCAGAGTGTTTATAGATATATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR GCA 90 bp TGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTTTTATTATCCATTTGTaGACCTTGACAGCTGTTGTC +
Preference number: 4 (lower is better)
Translates to: WRKWEYKVFSTTWILSFFFIIHL*TLTAVV
Trigger: GACAACAGCTGTCAAGGTGCACAAATGGATAATAAA...AAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR GCA 90 bp GTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGGATGAGTTGCATATaGTCCAAAAATCTGATTATC +
Preference number: 4 (lower is better)
Translates to: VWIWRKWEYKVFSTTWILRMSCI*SKNLII
Trigger: GATAATCAGATTTTTGGAGCATATGCAACTCATCCT...TAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp ATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGAGGATGAGTTGCATATaGTCCAAAAATCTGATTATC +
Preference number: 4 (lower is better)
Translates to: MDLEEVGVQSLFNNLDFKRMSCI*SKNLII
Trigger: GATAATCAGATTTTTGGAGCATATGCAACTCATCCT...CTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp TGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCACAGCATCTGGATATaGTCTCACAATTATAGTATC +
Preference number: 4 (lower is better)
Translates to: WRKWEYKVFSTTWILSFFHSIWI*SHNYSI
Trigger: GATACTATAATTGTGAGAGCATATCCAGATGCTGTG...AAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp ATACAGATATATAGATATATGCTGCTTAAGACCTATCACCCTAAACAATCAGGGAAATTTCACCACACCTaGCTCATCTTCTTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: IQIYRYMLLKTYHPKQSGKFHHT*LIFFRS
Trigger: ACTTCTGAAGAAGATGAGCCAGGTGTGGTGAAATTT...CCCTGATTGTTTAGGGTGATAGGTCTTAAGCAGCATATATCTATATATCTGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR TCA 90 bp ATACAGATATATAGATATATGCTGCTTAAGACCTATCACCCTAAACAATCAGGGCGGGGAAATAATTTATaGCAGACCATTTTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: IQIYRYMLLKTYHPKQSGRGNNL*QTIFQL
Trigger: AAGCTGAAAAATGGTCTGTCATAAATTATTTCCCCG...CCCTGATTGTTTAGGGTGATAGGTCTTAAGCAGCATATATCTATATATCTGTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR TCA 90 bp CTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACAATTATAGTATCAATTTTCAGTAGAGTCTaGAGAAACATTTGGTTGCCT +
Preference number: 4 (lower is better)
Translates to: LFYIENTASGYALTIIVSIFSRV*RNIWLP
Trigger: AGGCAACCAAATGTTTCTTCAGACTCTACTGAAAAT...TGATACTATAATTGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR GCA 90 bp ATACAGATATATAGATATATGCTGCTTAAGACCTATCACCCTAAACAATCAGGGTTTATTATCCATTTGTaGACCTTGACAGCTGTTGTC +
Preference number: 4 (lower is better)
Translates to: IQIYRYMLLKTYHPKQSGFIIHL*TLTAVV
Trigger: GACAACAGCTGTCAAGGTGCACAAATGGATAATAAA...CCCTGATTGTTTAGGGTGATAGGTCTTAAGCAGCATATATCTATATATCTGTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR GCA 90 bp TCTGGATATGCTCTCACAATTATAGTATCATGGACTAAACTAGGTCAGAGTGAAAGGATGAGTTGCATATaGTCCAAAAATCTGATTATC +
Preference number: 4 (lower is better)
Translates to: SGYALTIIVSWTKLGQSERMSCI*SKNLII
Trigger: GATAATCAGATTTTTGGAGCATATGCAACTCATCCT...TTCACTCTGACCTAGTTTAGTCCATGATACTATAATTGTGAGAGCATATCCAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp CTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACAATTATAGTATCACACAGCATCTGGATATaGTCTCACAATTATAGTATC +
Preference number: 4 (lower is better)
Translates to: LFYIENTASGYALTIIVSHSIWI*SHNYSI
Trigger: GATACTATAATTGTGAGAGCATATCCAGATGCTGTG...TGATACTATAATTGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR GCA 90 bp ATACAGATATATAGATATATGCTGCTTAAGACCTATCACCCTAAACAATCAGGGCACAGCATCTGGATATaGTCTCACAATTATAGTATC +
Preference number: 4 (lower is better)
Translates to: IQIYRYMLLKTYHPKQSGHSIWI*SHNYSI
Trigger: GATACTATAATTGTGAGAGCATATCCAGATGCTGTG...CCCTGATTGTTTAGGGTGATAGGTCTTAAGCAGCATATATCTATATATCTGTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp AGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTATTTTCAGATACCTGTaGCCCTTCTTTGTTCTTAGT +
Preference number: 4 (lower is better)
Translates to: RKWEYKVFSTTWILSFFLIFRYL*PFFVLS
Trigger: ACTAAGAACAAAGAAGGGCCACAGGTATCTGAAAAT...AAGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CCA 90 bp CTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACAATTATAGTATCAAGAGAACACAGCATCTaGATATGCTCTCACAATTAT +
Preference number: 4 (lower is better)
Translates to: LFYIENTASGYALTIIVSREHSI*ICSHNY
Trigger: ATAATTGTGAGAGCATATCCAGATGCTGTGTTCTCT...TGATACTATAATTGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CCA 90 bp CTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACAATTATAGTATCAAGAAACCAAGACAATTaGTCCAATTTGACGTTTTTC +
Preference number: 4 (lower is better)
Translates to: LFYIENTASGYALTIIVSRNQDN*SNLTFF
Trigger: GAAAAACGTCAAATTGGACCAATTGTCTTGGTTTCT...TGATACTATAATTGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS GCA 90 bp AGAAGGGGATCGGTCGCATGCATTTCTGGGAGCGGTGGCCTCTGCTaGTGGGCGCCGGGGAGCGCATCCTCTCGGCGGGTGGAAGGAGGG +
Preference number: 5 (lower is better)
Translates to: RRGSVACISGSGGLC*WAPGSASSRRVEGG
Trigger: CCCTCCTTCCACCCGCCGAGAGGATGCGCTCCCCGGCGCCCAGCAGCAGAGGCCACCGCTCCCAGAAATGCATGCGACCGATCCCCTTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417494.5
ENST00000453302.5
CDS GCA 90 bp GGGAGAAGGGGATCGGTCGCATGCATTTCTGGGAGCGGTGGCCTCTaGTGCTGGGCGCCGGGGAGCGCATCCTCTCGGCGGGTGGAAGGA +
Preference number: 5 (lower is better)
Translates to: GRRGSVACISGSGGL*CWAPGSASSRRVEG
Trigger: TCCTTCCACCCGCCGAGAGGATGCGCTCCCCGGCGCCCAGCAGCAGAGGCCACCGCTCCCAGAAATGCATGCGACCGATCCCCTTCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417494.5
ENST00000453302.5
CDS CCA 90 bp CCTGGGCGACAGAGTGGGAATCTACAGGGCGGGGGCGCCGGCTCCTaGGGTCCGGGAGAAGGGGATCGGTCGCATGCATTTCTGGGAGCG +
Preference number: 5 (lower is better)
Translates to: PGRQSGNLQGGGAGS*GPGEGDRSHAFLGA
Trigger: CGCTCCCAGAAATGCATGCGACCGATCCCCTTCTCCCGGACCCCAGGAGCCGGCGCCCCCGCCCTGTAGATTCCCACTCTGTCGCCCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453302.5
CDS-3UTR CAA 90 bp AGGCTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCTCTCCATGGATACCCTaGCACCCTTGCAGGAAGGCG +
Preference number: 5 (lower is better)
Translates to: RLGWGFFFQPALGGLIEPSPWIP*HPCRKA
Trigger: CGCCTTCCTGCAAGGGTGCAAGGGTATCCATGGAGA...GGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CAA 90 bp CTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAGTGGCTGCTTTCTCCGTTaGCCGTACTGCTGGACCATG +
Preference number: 5 (lower is better)
Translates to: LGWGFFFQPALGGLIEPSGCFLR*PYCWTM
Trigger: CATGGTCCAGCAGTACGGCAAACGGAGAAAGCAGCC...ACTGGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp AGGCTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCTGCAGTGGCACGATCTaGGCTCACTACAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: RLGWGFFFQPALGGLIEPCSGTI*AHYNLC
Trigger: GCAGAGGTTGTAGTGAGCCAAGATCGTGCCACTGCA...GGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CAA 90 bp AGGCTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCCACCACCACAAAGCCTaGCTCTTTGGCATCTTTTCC +
Preference number: 5 (lower is better)
Translates to: RLGWGFFFQPALGGLIEPHHHKA*LFGIFS
Trigger: GGAAAAGATGCCAAAGAGCAAGGCTTTGTGGTGGTG...GGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp CTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAGTTGGGGTTTCACCATGTaGGCCAGACTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: LGWGFFFQPALGGLIEPSWGFTM*ARLVSN
Trigger: GTTTGAGACCAGTCTGGCCAACATGGTGAAACCCCA...ACTGGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS GCA 90 bp TCTCCCGAGGAACAGCAAACCAGTACTCTGGCTGCTTTCTCCGTTTaGCGTACTGCTGGACCATGGCTGCAGTGTGAGTGGCAAAGGATT +
Preference number: 5 (lower is better)
Translates to: SPEEQQTSTLAAFSV*RTAGPWLQCEWQRI
Trigger: AATCCTTTGCCACTCACACTGCAGCCATGGTCCAGCAGTACGGCAAACGGAGAAAGCAGCCAGAGTACTGGTTTGCTGTTCCTCGGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS GCA 90 bp CCGATTTCCGGTAGAGCGTCTTTAAGCTGGTCCCGTGCTCTAACGTaGTATAGGCCAGTCTCCATGGATACCCTTGCACCCTTGCAGGAA +
Preference number: 5 (lower is better)
Translates to: PISGRASLSWSRALT*YRPVSMDTLAPLQE
Trigger: TTCCTGCAAGGGTGCAAGGGTATCCATGGAGACTGGCCTATAGCACGTTAGAGCACGGGACCAGCTTAAAGACGCTCTACCGGAAATCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000433571.2
ENST00000438495.6
ENST00000444128.2
CDS CCA 90 bp GTACAAATGATCCACCCTCTCCCGAGGAACAGCAAACCAGTACTCTaGCTGCTTTCTCCGTTTGCCGTACTGCTGGACCATGGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: VQMIHPLPRNSKPVL*LLSPFAVLLDHGCS
Trigger: ACTGCAGCCATGGTCCAGCAGTACGGCAAACGGAGAAAGCAGCCAGAGTACTGGTTTGCTGTTCCTCGGGAGAGGGTGGATCATTTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp CTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAGTCACCACCACAAAGCCTaGCTCTTTGGCATCTTTTCC +
Preference number: 5 (lower is better)
Translates to: LGWGFFFQPALGGLIEPSHHHKA*LFGIFS
Trigger: GGAAAAGATGCCAAAGAGCAAGGCTTTGTGGTGGTG...ACTGGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp GTCTGCCCTCTACATGGACCTTCCAGAATCTTTCTGCAATGTGATCATGCTCTGGATACCCTTGCACCCTaGCAGGAAGGCGTCGGGCCA +
Preference number: 5 (lower is better)
Translates to: VCPLHGPSRIFLQCDHALDTLAP*QEGVGP
Trigger: TGGCCCGACGCCTTCCTGCAAGGGTGCAAGGGTATC...CAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTCCATGTAGAGGGCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CAA 90 bp AGGCTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCCCTCACTGTATGGATTaGGAGGAAGTGGGAGTACAA +
Preference number: 5 (lower is better)
Translates to: RLGWGFFFQPALGGLIEPPHCMD*EEVGVQ
Trigger: TTGTACTCCCACTTCCTCCAAATCCATACAGTGAGG...GGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS CCA 90 bp CAGGACTGTCTAGTGATGCCGATTTCCGGTAGAGCGTCTTTAAGCTaGTCCCGTGCTCTAACGTGCTATAGGCCAGTCTCCATGGATACC +
Preference number: 5 (lower is better)
Translates to: QDCLVMPISGRASLS*SRALTCYRPVSMDT
Trigger: GGTATCCATGGAGACTGGCCTATAGCACGTTAGAGCACGGGACCAGCTTAAAGACGCTCTACCGGAAATCGGCATCACTAGACAGTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000433571.2
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CAA 90 bp AGGCTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCATTGGTTTTCCCACTTaGATGCACAGGAACATGGGT +
Preference number: 5 (lower is better)
Translates to: RLGWGFFFQPALGGLIEPIGFPT*MHRNMG
Trigger: ACCCATGTTCCTGTGCATCAAAGTGGGAAAACCAAT...GGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp AGGCTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCTCTTCCACAGCAATGTaGCACTTGTCTGGCTCTAAA +
Preference number: 5 (lower is better)
Translates to: RLGWGFFFQPALGGLIEPSSTAM*HLSGSK
Trigger: TTTAGAGCCAGACAAGTGCAACATTGCTGTGGAAGA...GGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp CTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAGTTCTCCAAAGGTACTATaGGTCTGGAATCCGAAGTCA +
Preference number: 5 (lower is better)
Translates to: LGWGFFFQPALGGLIEPSSPKVL*VWNPKS
Trigger: TGACTTCGGATTCCAGACCAATAGTACCTTTGGAGA...ACTGGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp AGGCTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCCATTCCACCACCAGTTaGAGAAGAAAGTTCTTCCAA +
Preference number: 5 (lower is better)
Translates to: RLGWGFFFQPALGGLIEPHSTTS*RRKFFQ
Trigger: TTGGAAGAACTTTCTTCTCAAACTGGTGGTGGAATG...GGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp GTCTGCCCTCTACATGGACCTTCCAGAATCTTTCTGCAATGTGATCATGCTCTGTCTCCATGGATACCCTaGCACCCTTGCAGGAAGGCG +
Preference number: 5 (lower is better)
Translates to: VCPLHGPSRIFLQCDHALSPWIP*HPCRKA
Trigger: CGCCTTCCTGCAAGGGTGCAAGGGTATCCATGGAGA...CAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTCCATGTAGAGGGCAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CAA 90 bp CTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAGTAAAGTGCTGCAAGAGTaGCTTCGTCCGTGGTATAAA +
Preference number: 5 (lower is better)
Translates to: LGWGFFFQPALGGLIEPSKVLQE*LRPWYK
Trigger: TTTATACCACGGACGAAGCAACTCTTGCAGCACTTT...ACTGGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CAA 90 bp AGGCTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCACAGCAATGTTGCACTaGTCTGGCTCTAAAACTACT +
Preference number: 5 (lower is better)
Translates to: RLGWGFFFQPALGGLIEPTAMLH*SGSKTT
Trigger: AGTAGTTTTAGAGCCAGACAAGTGCAACATTGCTGT...GGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp AGGCTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCACTAGCAAGCAGTCTTaGGCTTTCATAAAAGTCTGG +
Preference number: 5 (lower is better)
Translates to: RLGWGFFFQPALGGLIEPTSKQS*AFIKVW
Trigger: CCAGACTTTTATGAAAGCCAAAGACTGCTTGCTAGT...GGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CAA 90 bp AGGCTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAGATACAGCCAAGAGTaGTCTCTGGTAACCATAATG +
Preference number: 5 (lower is better)
Translates to: RLGWGFFFQPALGGLIEPRYSQE*SLVTIM
Trigger: CATTATGGTTACCAGAGACAACTCTTGGCTGTATCT...GGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS CCA 90 bp CACTGTGTGCAGCACCCATTGGCAGGGATTAGTCTGCAGTGGAAATaGACCCTCAGCTATTCTCCAAAGCTACTTGTCTCCAAGCTTGCT +
Preference number: 5 (lower is better)
Translates to: HCVQHPLAGISLQWK*TLSYSPKLLVSKLA
Trigger: AGCAAGCTTGGAGACAAGTAGCTTTGGAGAATAGCTGAGGGTCCATTTCCACTGCAGACTAATCCCTGCCAATGGGTGCTGCACACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433571.2
CDS-3UTR CAA 90 bp TCACATGGCTGGGTAGGCGTCAGGAAATTTACAATCATGGCAGAAGGCAAAGGGGTGTCGGAAGGTTCCTaGCTGAGCTTAGTCACTGTG +
Preference number: 5 (lower is better)
Translates to: SHGWVGVRKFTIMAEGKGVSEGS*LSLVTV
Trigger: CACAGTGACTAAGCTCAGCAAGGAACCTTCCGACAC...CCCTTTGCCTTCTGCCATGATTGTAAATTTCCTGACGCCTACCCAGCCATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR CAA 90 bp AGGCTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCATTTCCACGGCAGAATaGTTTATTTGTGACTCAGCT +
Preference number: 5 (lower is better)
Translates to: RLGWGFFFQPALGGLIEPISTAE*FICDSA
Trigger: AGCTGAGTCACAAATAAACAATTCTGCCGTGGAAAT...GGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp CTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAGTACTAGCAAGCAGTCTTaGGCTTTCATAAAAGTCTGG +
Preference number: 5 (lower is better)
Translates to: LGWGFFFQPALGGLIEPSTSKQS*AFIKVW
Trigger: CCAGACTTTTATGAAAGCCAAAGACTGCTTGCTAGT...ACTGGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS GCA 90 bp GTACTCTGGCTGCTTTCTCCGTTTGCCGTACTGCTGGACCATGGCTaGAGTGTGAGTGGCAAAGGATTTTCTCATTGGTTTTCCCACTTT +
Preference number: 5 (lower is better)
Translates to: VLWLLSPFAVLLDHG*SVSGKGFSHWFSHF
Trigger: AAAGTGGGAAAACCAATGAGAAAATCCTTTGCCACTCACACTGCAGCCATGGTCCAGCAGTACGGCAAACGGAGAAAGCAGCCAGAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS CCA 90 bp TGTGTACAAATGATCCACCTCCCAAACACTGTGTGCAGCACCCATTaGCAGGGATTAGTCTGCAGTGGAAATGGACCCTCAGCTATTCTC +
Preference number: 5 (lower is better)
Translates to: CVQMIHLPNTVCSTH*QGLVCSGNGPSAIL
Trigger: GAGAATAGCTGAGGGTCCATTTCCACTGCAGACTAATCCCTGCCAATGGGTGCTGCACACAGTGTTTGGGAGGTGGATCATTTGTACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433571.2
CDS-3UTR CAA 90 bp CTGGGCTGGGGCTTCTTTTTCCAGCCAGCTTTAGGAGGGCTGATCGAACCCAGTAACTTACTGAATGGGTaGATATCCTTTTCTGAAGCC +
Preference number: 5 (lower is better)
Translates to: LGWGFFFQPALGGLIEPSNLLNG*ISFSEA
Trigger: GGCTTCAGAAAAGGATATCAACCCATTCAGTAAGTT...ACTGGGTTCGATCAGCCCTCCTAAAGCTGGCTGGAAAAAGAAGCCCCAGCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp GTCTGCCCTCTACATGGACCTTCCAGAATCTTTCTGCAATGTGATCATGCTCTGCTCAAACTTGTGACCTaGAGTGATCCACCTGCCTCG +
Preference number: 5 (lower is better)
Translates to: VCPLHGPSRIFLQCDHALLKLVT*SDPPAS
Trigger: CGAGGCAGGTGGATCACTCAAGGTCACAAGTTTGAG...CAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTCCATGTAGAGGGCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CAA 90 bp GTCTGCCCTCTACATGGACCTTCCAGAATCTTTCTGCAATGTGATCATGCTCTGTGGGGTTTCACCATGTaGGCCAGACTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: VCPLHGPSRIFLQCDHALWGFTM*ARLVSN
Trigger: GTTTGAGACCAGTCTGGCCAACATGGTGAAACCCCA...CAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTCCATGTAGAGGGCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS GCA 90 bp TTCGTCCTCGTCTTCATAGTAGCTGCATGTGCTCTTCCTGCGCTTTaGCTCTTCAACAGTGATGATCTTCACAAAAGGCTCTTCGTCAGG +
Preference number: 5 (lower is better)
Translates to: FVLVFIVAACALPAL*LFNSDDLHKRLFVR
Trigger: CCTGACGAAGAGCCTTTTGTGAAGATCATCACTGTTGAAGAGGCAAAGCGCAGGAAGAGCACATGCAGCTACTATGAAGACGAGGACGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438495.6
ENST00000444128.2
CDS CCA 90 bp GTGTCGGAAGGTTCCTTGCTGAGCTTAGTCACTGTGGGAGAACCATaGGATGTCTCCCTAGAGGAGTCCAGTTTCTTTAATTTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: VSEGSLLSLVTVGEP*DVSLEESSFFNFSD
Trigger: GTCAGAGAAATTAAAGAAACTGGACTCCTCTAGGGAGACATCCCATGGTTCTCCCACAGTGACTAAGCTCAGCAAGGAACCTTCCGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp CATATATCTATAAACACTCTGATTCCTCACTGTATGGATTTGGAGGAAGTGGGAGATACCCTTGCACCCTaGCAGGAAGGCGTCGGGCCA +
Preference number: 5 (lower is better)
Translates to: HISINTLIPHCMDLEEVGDTLAP*QEGVGP
Trigger: TGGCCCGACGCCTTCCTGCAAGGGTGCAAGGGTATC...TCCCACTTCCTCCAAATCCATACAGTGAGGAATCAGAGTGTTTATAGATATATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CAA 90 bp GAATGGACAATACTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACAGATACCCTTGCACCCTaGCAGGAAGGCGTCGGGCCA +
Preference number: 5 (lower is better)
Translates to: EWTILFYIENTASGYALTDTLAP*QEGVGP
Trigger: TGGCCCGACGCCTTCCTGCAAGGGTGCAAGGGTATC...TGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAGTATTGTCCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CAA 90 bp TGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTGATACCCTTGCACCCTaGCAGGAAGGCGTCGGGCCA +
Preference number: 5 (lower is better)
Translates to: CMDLEEVGVQSLFNNLDFDTLAP*QEGVGP
Trigger: TGGCCCGACGCCTTCCTGCAAGGGTGCAAGGGTATC...AAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CAA 90 bp AGGATGTCTCTGGTGGCTTGTAGCACGGGGATGCATCTAATCATTTTCAGTAGATGGGGTTTCACCATGTaGGCCAGACTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: RMSLVACSTGMHLIIFSRWGFTM*ARLVSN
Trigger: GTTTGAGACCAGTCTGGCCAACATGGTGAAACCCCA...TCTACTGAAAATGATTAGATGCATCCCCGTGCTACAAGCCACCAGAGACATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS CCA 90 bp GTCTTATCTGGCTCTTTATTGCCCTCAGTTATGGGATCACCCGCCTaGGAAAGAGAACTACTAAGGGTAATGTCTATTCCCCCTGGTTCA +
Preference number: 5 (lower is better)
Translates to: VLSGSLLPSVMGSPA*ERELLRVMSIPPGS
Trigger: TGAACCAGGGGGAATAGACATTACCCTTAGTAGTTCTCTTTCCCAGGCGGGTGATCCCATAACTGAGGGCAATAAAGAGCCAGATAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTGGCTGCTTTCTCCGTTaGCCGTACTGCTGGACCATG +
Preference number: 5 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFGCFLR*PYCWTM
Trigger: CATGGTCCAGCAGTACGGCAAACGGAGAAAGCAGCC...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp GAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTGATACCCTTGCACCCTaGCAGGAAGGCGTCGGGCCA +
Preference number: 5 (lower is better)
Translates to: EEVGVQSLFNNLDFKFLSDTLAP*QEGVGP
Trigger: TGGCCCGACGCCTTCCTGCAAGGGTGCAAGGGTATC...AGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CAA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTCTCCATGGATACCCTaGCACCCTTGCAGGAAGGCG +
Preference number: 5 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFSPWIP*HPCRKA
Trigger: CGCCTTCCTGCAAGGGTGCAAGGGTATCCATGGAGA...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CAA 90 bp GTCTGCCCTCTACATGGACCTTCCAGAATCTTTCTGCAATGTGATCATGCTCTGCCTCACTGTATGGATTaGGAGGAAGTGGGAGTACAA +
Preference number: 5 (lower is better)
Translates to: VCPLHGPSRIFLQCDHALPHCMD*EEVGVQ
Trigger: TTGTACTCCCACTTCCTCCAAATCCATACAGTGAGG...CAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTCCATGTAGAGGGCAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CAA 90 bp TCACATGGCTGGGTAGGCGTCAGGAAATTTACAATCATGGCAGAAGGCAAAGGGTCCCACCCAAGTCCTTaGATATGGACTTATGAACTG +
Preference number: 5 (lower is better)
Translates to: SHGWVGVRKFTIMAEGKGSHPSP*IWTYEL
Trigger: CAGTTCATAAGTCCATATCAAAGGACTTGGGTGGGA...CCCTTTGCCTTCTGCCATGATTGTAAATTTCCTGACGCCTACCCAGCCATGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS GCA 90 bp AAGTGTGGCTCTCTCTCTAATGAGGAACAAGTTTTCTCTCTACTCTaGTTCCACACCACAGTTACTTGTAGCCACGCTGAGCTACAACTG +
Preference number: 5 (lower is better)
Translates to: KCGSLSNEEQVFSLL*FHTTVTCSHAELQL
Trigger: CAGTTGTAGCTCAGCGTGGCTACAAGTAACTGTGGTGTGGAAGCAGAGTAGAGAGAAAACTTGTTCCTCATTAGAGAGAGAGCCACACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438495.6
CDS-3UTR CAA 90 bp TGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTTCTCCATGGATACCCTaGCACCCTTGCAGGAAGGCG +
Preference number: 5 (lower is better)
Translates to: CMDLEEVGVQSLFNNLDFSPWIP*HPCRKA
Trigger: CGCCTTCCTGCAAGGGTGCAAGGGTATCCATGGAGA...AAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CAA 90 bp GTCTGCCCTCTACATGGACCTTCCAGAATCTTTCTGCAATGTGATCATGCTCTGAAAGTGCTGCAAGAGTaGCTTCGTCCGTGGTATAAA +
Preference number: 5 (lower is better)
Translates to: VCPLHGPSRIFLQCDHALKVLQE*LRPWYK
Trigger: TTTATACCACGGACGAAGCAACTCTTGCAGCACTTT...CAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTCCATGTAGAGGGCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CAA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTGCAGTGGCACGATCTaGGCTCACTACAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFCSGTI*AHYNLC
Trigger: GCAGAGGTTGTAGTGAGCCAAGATCGTGCCACTGCA...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS CCA 90 bp GGGCTTTGTAGGTGTATGTCCTGTGGACTTCTCCAAAGGTACTATTaGTCTGGAATCCGAAGTCATAATTTTCTCTCCATTCTGCTGTCG +
Preference number: 5 (lower is better)
Translates to: GLCRCMSCGLLQRYY*SGIRSHNFLSILLS
Trigger: CGACAGCAGAATGGAGAGAAAATTATGACTTCGGATTCCAGACCAATAGTACCTTTGGAGAAGTCCACAGGACATACACCTACAAAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp GTTTCACATGGCTGGGTAGGCGTCAGGAAATTTACAATCATGGCAGAAGGCAAAAAAGTGCTGCAAGAGTaGCTTCGTCCGTGGTATAAA +
Preference number: 5 (lower is better)
Translates to: VSHGWVGVRKFTIMAEGKKVLQE*LRPWYK
Trigger: TTTATACCACGGACGAAGCAACTCTTGCAGCACTTT...TTTGCCTTCTGCCATGATTGTAAATTTCCTGACGCCTACCCAGCCATGTGAAAC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR CAA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTAAGCTTCCTTCCATCTaGCAGCGGAGCGAAGTCTCT +
Preference number: 5 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFKLPSI*QRSEVS
Trigger: AGAGACTTCGCTCCGCTGCAAGATGGAAGGAAGCTT...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368357.7
CDS-3UTR CAA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTGGGGTTTCACCATGTaGGCCAGACTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFWGFTM*ARLVSN
Trigger: GTTTGAGACCAGTCTGGCCAACATGGTGAAACCCCA...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CAA 90 bp GTTTCACATGGCTGGGTAGGCGTCAGGAAATTTACAATCATGGCAGAAGGCAAAGTTAAGAGGAGGAGGTaGTCATTCATTGCACAGCTA +
Preference number: 5 (lower is better)
Translates to: VSHGWVGVRKFTIMAEGKVKRRR*SFIAQL
Trigger: TAGCTGTGCAATGAATGACAACCTCCTCCTCTTAAC...TTTGCCTTCTGCCATGATTGTAAATTTCCTGACGCCTACCCAGCCATGTGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS GCA 90 bp TTCAGTTCAACATCATTCTCTGTTCCCAAAAAGGCTAGGGCTGACTaGACCTGCATTTCCACGGCAGAATTGTTTATTTGTGACTCAGCT +
Preference number: 5 (lower is better)
Translates to: FSSTSFSVPKKARAD*TCISTAELFICDSA
Trigger: AGCTGAGTCACAAATAAACAATTCTGCCGTGGAAATGCAGGTGCAGTCAGCCCTAGCCTTTTTGGGAACAGAGAATGATGTTGAACTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS GCA 90 bp TGTATGTTCAGTGTGTTTTCTACTCGGCTTTCTGGCGAACCAGACTaGTTGTCCACTTCTGGCATTATATCTTGCTTCTCACAGGTTTCT +
Preference number: 5 (lower is better)
Translates to: CMFSVFSTRLSGEPD*LSTSGIISCFSQVS
Trigger: AGAAACCTGTGAGAAGCAAGATATAATGCCAGAAGTGGACAAGCAGTCTGGTTCGCCAGAAAGCCGAGTAGAAAACACACTGAACATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp GTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAGTGTCGGAAGGTTCCTaGCTGAGCTTAGTCACTGTG +
Preference number: 5 (lower is better)
Translates to: VWIWRKWEYKVFSTTWILVSEGS*LSLVTV
Trigger: CACAGTGACTAAGCTCAGCAAGGAACCTTCCGACAC...TAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp ATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGGTGTCGGAAGGTTCCTaGCTGAGCTTAGTCACTGTG +
Preference number: 5 (lower is better)
Translates to: MDLEEVGVQSLFNNLDFKVSEGS*LSLVTV
Trigger: CACAGTGACTAAGCTCAGCAAGGAACCTTCCGACAC...CTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTGGCGAACCAGACTGCTaGTCCACTTCTGGCATTATA +
Preference number: 5 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFGEPDC*STSGII
Trigger: TATAATGCCAGAAGTGGACAAGCAGTCTGGTTCGCC...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp AGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTGGCTGCTTTCTCCGTTaGCCGTACTGCTGGACCATG +
Preference number: 5 (lower is better)
Translates to: RKWEYKVFSTTWILSFFLGCFLR*PYCWTM
Trigger: CATGGTCCAGCAGTACGGCAAACGGAGAAAGCAGCC...AAGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp CTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACAATTATAGTATCATCTCCATGGATACCCTaGCACCCTTGCAGGAAGGCG +
Preference number: 5 (lower is better)
Translates to: LFYIENTASGYALTIIVSSPWIP*HPCRKA
Trigger: CGCCTTCCTGCAAGGGTGCAAGGGTATCCATGGAGA...TGATACTATAATTGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CAA 90 bp GAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTCTTGACTCAGGCCGGTaGGGACACAGGAGGCAAATA +
Preference number: 5 (lower is better)
Translates to: EEVGVQSLFNNLDFKFLSLDSGR*GHRRQI
Trigger: TATTTGCCTCCTGTGTCCCAACCGGCCTGAGTCAAG...AGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368357.7
CDS-3UTR CAA 90 bp CATATATCTATAAACACTCTGATTCCTCACTGTATGGATTTGGAGGAAGTGGGACTCAAACTTGTGACCTaGAGTGATCCACCTGCCTCG +
Preference number: 5 (lower is better)
Translates to: HISINTLIPHCMDLEEVGLKLVT*SDPPAS
Trigger: CGAGGCAGGTGGATCACTCAAGGTCACAAGTTTGAG...TCCCACTTCCTCCAAATCCATACAGTGAGGAATCAGAGTGTTTATAGATATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS TCA 90 bp CTTGTTGATAGATTTGAACTTACTGAATGGGTTGATATCCTTTTCTaGAGCCAGGTCTTCCCATTCTCCAGGCGATGGCAAGGCATCTTT +
Preference number: 5 (lower is better)
Translates to: LVDRFELTEWVDILF*SQVFPFSRRWQGIF
Trigger: AAAGATGCCTTGCCATCGCCTGGAGAATGGGAAGACCTGGCTTCAGAAAAGGATATCAACCCATTCAGTAAGTTCAAATCTATCAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229634.13
CDS TCA 90 bp GTGGTAATGGATGATGACTGCAAGTCACAGTGGCGGCGGATGTTGTaGGCAAGTTCATTACAAATTTATGTCTTACTTAAGCTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: VVMDDDCKSQWRRML*ASSLQIYVLLKLPS
Trigger: GGAAGGAAGCTTAAGTAAGACATAAATTTGTAATGAACTTGCTCACAACATCCGCCGCCACTGTGACTTGCAGTCATCATCCATTACCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368357.7
CDS TCA 90 bp CTTGTTGATAGATTTGAACTTACTGAATGGGTTGATATCCTTTTCTaGAGCCAGGTCTTCCCATTCTCCAGGCCTGTACAGAGGACAAAG +
Preference number: 5 (lower is better)
Translates to: LVDRFELTEWVDILF*SQVFPFSRPVQRTK
Trigger: CTTTGTCCTCTGTACAGGCCTGGAGAATGGGAAGACCTGGCTTCAGAAAAGGATATCAACCCATTCAGTAAGTTCAAATCTATCAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS GCA 90 bp TCAACATCATTCTCTGTTCCCAAAAAGGCTAGGGCTGACTGCACCTaGATTTCCACGGCAGAATTGTTTATTTGTGACTCAGCTTTCTTT +
Preference number: 5 (lower is better)
Translates to: STSFSVPKKARADCT*ISTAELFICDSAFF
Trigger: AAAGAAAGCTGAGTCACAAATAAACAATTCTGCCGTGGAAATGCAGGTGCAGTCAGCCCTAGCCTTTTTGGGAACAGAGAATGATGTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp ATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGGGCGAACCAGACTGCTaGTCCACTTCTGGCATTATA +
Preference number: 5 (lower is better)
Translates to: MDLEEVGVQSLFNNLDFKGEPDC*STSGII
Trigger: TATAATGCCAGAAGTGGACAAGCAGTCTGGTTCGCC...CTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp ATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGCACCACCACAAAGCCTaGCTCTTTGGCATCTTTTCC +
Preference number: 5 (lower is better)
Translates to: MDLEEVGVQSLFNNLDFKHHHKA*LFGIFS
Trigger: GGAAAAGATGCCAAAGAGCAAGGCTTTGTGGTGGTG...CTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp GTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAATGATCTCCCAGCTCTaGGTTGTTGGCTCACTGAAG +
Preference number: 5 (lower is better)
Translates to: VWIWRKWEYKVFSTTWILMISQL*VVGSLK
Trigger: CTTCAGTGAGCCAACAACCAAGAGCTGGGAGATCAT...TAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp GTCTGCCCTCTACATGGACCTTCCAGAATCTTTCTGCAATGTGATCATGCTCTGAAATGTACGCTTTTATaGACTAAATGGAAAGCTGGC +
Preference number: 5 (lower is better)
Translates to: VCPLHGPSRIFLQCDHALKCTLL*TKWKAG
Trigger: GCCAGCTTTCCATTTAGTCAATAAAAGCGTACATTT...CAGAGCATGATCACATTGCAGAAAGATTCTGGAAGGTCCATGTAGAGGGCAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CAA 90 bp AAAACTTTAAAAGGCATCAAGGAGAGGGAGATCAAATTAAGGGAAGACATACTTTGCAGTGGCACGATCTaGGCTCACTACAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: KTLKGIKEREIKLREDILCSGTI*AHYNLC
Trigger: GCAGAGGTTGTAGTGAGCCAAGATCGTGCCACTGCA...AAGTATGTCTTCCCTTAATTTGATCTCCCTCTCCTTGATGCCTTTTAAAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR CAA 90 bp AGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTTGCAGTGGCACGATCTaGGCTCACTACAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: RKWEYKVFSTTWILSFFLCSGTI*AHYNLC
Trigger: GCAGAGGTTGTAGTGAGCCAAGATCGTGCCACTGCA...AAGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS CCA 90 bp GAAAGAATATCATTATTGAAAGTGCTGCAAGAGTTGCTTCGTCCGTaGTATAAATCAGCATCTAGCCATAAACCAAATCGTCCCCCTCCA +
Preference number: 5 (lower is better)
Translates to: ERISLLKVLQELLRP*YKSASSHKPNRPPP
Trigger: TGGAGGGGGACGATTTGGTTTATGGCTAGATGCTGATTTATACCACGGACGAAGCAACTCTTGCAGCACTTTCAATAATGATATTCTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
CDS-3UTR CAA 90 bp GTTTCACATGGCTGGGTAGGCGTCAGGAAATTTACAATCATGGCAGAAGGCAAATCCTTGTTGATAGATTaGAACTTACTGAATGGGTTG +
Preference number: 5 (lower is better)
Translates to: VSHGWVGVRKFTIMAEGKSLLID*NLLNGL
Trigger: CAACCCATTCAGTAAGTTCAAATCTATCAACAAGGA...TTTGCCTTCTGCCATGATTGTAAATTTCCTGACGCCTACCCAGCCATGTGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR CAA 90 bp GAATGGACAATACTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACAATCCATTTGTGCACCTaGACAGCTGTTGTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: EWTILFYIENTASGYALTIHLCT*TAVVQS
Trigger: ACTCTGGACAACAGCTGTCAAGGTGCACAAATGGAT...TGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAGTATTGTCCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTAAAGTGCTGCAAGAGTaGCTTCGTCCGTGGTATAAA +
Preference number: 5 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFKVLQE*LRPWYK
Trigger: TTTATACCACGGACGAAGCAACTCTTGCAGCACTTT...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CAA 90 bp CTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACAATTATAGTATCACTCAAACTTGTGACCTaGAGTGATCCACCTGCCTCG +
Preference number: 5 (lower is better)
Translates to: LFYIENTASGYALTIIVSLKLVT*SDPPAS
Trigger: CGAGGCAGGTGGATCACTCAAGGTCACAAGTTTGAG...TGATACTATAATTGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS TCA 90 bp CCATACTCCTCACACCCATTTTCAATAACCAGAGGATCAGATTTATaGGGGTCAAACATGATGTTGTTAGGAGTCACTATCATAACACCG +
Preference number: 5 (lower is better)
Translates to: PYSSHPFSITRGSDL*GSNMMLLGVTIITP
Trigger: CGGTGTTATGATAGTGACTCCTAACAACATCATGTTTGACCCTCATAAATCTGATCCTCTGGTTATTGAAAATGGGTGTGAGGAGTATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS TCA 90 bp TTGTCTGGCTCTAAAACTACTGTATTATTATCTTCCTTCCCAGTATaGGTCCTTGTAGCTACAGCTGAGGCTGTCTCTGCATTTTGTTTG +
Preference number: 5 (lower is better)
Translates to: LSGSKTTVLLSSFPV*VLVATAEAVSAFCL
Trigger: CAAACAAAATGCAGAGACAGCCTCAGCTGTAGCTACAAGGACTCATACTGGGAAGGAAGATAATAATACAGTAGTTTTAGAGCCAGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000417494.5
ENST00000419660.1
ENST00000428318.1
ENST00000453302.5
ENST00000487635.1
CDS-3UTR CAA 90 bp GAATGGACAATACTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACATCTCCAAAGGTACTATaGGTCTGGAATCCGAAGTCA +
Preference number: 5 (lower is better)
Translates to: EWTILFYIENTASGYALTSPKVL*VWNPKS
Trigger: TGACTTCGGATTCCAGACCAATAGTACCTTTGGAGA...TGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAGTATTGTCCATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp CTGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTTATCTGGCTCTTTATaGCCCTCAGTTATGGGATCA +
Preference number: 5 (lower is better)
Translates to: LYGFGGSGSTKSFQQPGFLSGSL*PSVMGS
Trigger: TGATCCCATAACTGAGGGCAATAAAGAGCCAGATAA...AAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp TGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTATCCATTTGTGCACCTaGACAGCTGTTGTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: WRKWEYKVFSTTWILSFFIHLCT*TAVVQS
Trigger: ACTCTGGACAACAGCTGTCAAGGTGCACAAATGGAT...AAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp TCTGGATATGCTCTCACAATTATAGTATCATGGACTAAACTAGGTCAGAGTGAAATCCATTTGTGCACCTaGACAGCTGTTGTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: SGYALTIIVSWTKLGQSEIHLCT*TAVVQS
Trigger: ACTCTGGACAACAGCTGTCAAGGTGCACAAATGGAT...TTCACTCTGACCTAGTTTAGTCCATGATACTATAATTGTGAGAGCATATCCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp CATATATCTATAAACACTCTGATTCCTCACTGTATGGATTTGGAGGAAGTGGGAATTGGTTTTCCCACTTaGATGCACAGGAACATGGGT +
Preference number: 5 (lower is better)
Translates to: HISINTLIPHCMDLEEVGIGFPT*MHRNMG
Trigger: ACCCATGTTCCTGTGCATCAAAGTGGGAAAACCAAT...TCCCACTTCCTCCAAATCCATACAGTGAGGAATCAGAGTGTTTATAGATATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp CTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACAATTATAGTATCAATGATCTCCCAGCTCTaGGTTGTTGGCTCACTGAAG +
Preference number: 5 (lower is better)
Translates to: LFYIENTASGYALTIIVSMISQL*VVGSLK
Trigger: CTTCAGTGAGCCAACAACCAAGAGCTGGGAGATCAT...TGATACTATAATTGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp ATACAGATATATAGATATATGCTGCTTAAGACCTATCACCCTAAACAATCAGGGGCGGAGCGAAGTCTCTaGGGTCAGATTTCTTCAACT +
Preference number: 5 (lower is better)
Translates to: IQIYRYMLLKTYHPKQSGAERSL*GQISST
Trigger: AGTTGAAGAAATCTGACCCAAGAGACTTCGCTCCGC...CCCTGATTGTTTAGGGTGATAGGTCTTAAGCAGCATATATCTATATATCTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368357.7
CDS-3UTR CAA 90 bp AGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTAGCAATGAAGACTGCTaGGGGTCTTCATCTAGCCCA +
Preference number: 5 (lower is better)
Translates to: RKWEYKVFSTTWILSFFLSNEDC*GSSSSP
Trigger: TGGGCTAGATGAAGACCCCAAGCAGTCTTCATTGCT...AAGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR CAA 90 bp AGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTAGTCTGAAGAAACATTaGGTTGCCTCCTCCCACCCA +
Preference number: 5 (lower is better)
Translates to: RKWEYKVFSTTWILSFFLSLKKH*VASSHP
Trigger: TGGGTGGGAGGAGGCAACCAAATGTTTCTTCAGACT...AAGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR CAA 90 bp ATTAAGGGAAGACATACTTATAATAGTGCAGGATGTCTCTGGTGGCTTGTAGCATCGAGCAAAATAACTTaGTTTCCGTTCCTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: IKGRHTYNSAGCLWWLVASSKIT*FPFLLL
Trigger: GAGAAGAAGGAACGGAAACAAAGTTATTTTGCTCGA...TGCTACAAGCCACCAGAGACATCCTGCACTATTATAAGTATGTCTTCCCTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR CAA 90 bp GTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTATTATCTGGCTCTTTATaGCCCTCAGTTATGGGATCA +
Preference number: 5 (lower is better)
Translates to: VWIWRKWEYKVFSTTWILLSGSL*PSVMGS
Trigger: TGATCCCATAACTGAGGGCAATAAAGAGCCAGATAA...TAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp ATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGGGCTCACTGAAGAAGTaGTCAATCATGTTCAGTTCT +
Preference number: 5 (lower is better)
Translates to: MDLEEVGVQSLFNNLDFKGSLKK*SIMFSS
Trigger: AGAACTGAACATGATTGACAACTTCTTCAGTGAGCC...CTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp TGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTGGCTCACTGAAGAAGTaGTCAATCATGTTCAGTTCT +
Preference number: 5 (lower is better)
Translates to: CMDLEEVGVQSLFNNLDFGSLKK*SIMFSS
Trigger: AGAACTGAACATGATTGACAACTTCTTCAGTGAGCC...AAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp TGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTAAAGTGCTGCAAGAGTaGCTTCGTCCGTGGTATAAA +
Preference number: 5 (lower is better)
Translates to: WRKWEYKVFSTTWILSFFKVLQE*LRPWYK
Trigger: TTTATACCACGGACGAAGCAACTCTTGCAGCACTTT...AAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CAA 90 bp ATACAGATATATAGATATATGCTGCTTAAGACCTATCACCCTAAACAATCAGGGCCTCACTGTATGGATTaGGAGGAAGTGGGAGTACAA +
Preference number: 5 (lower is better)
Translates to: IQIYRYMLLKTYHPKQSGPHCMD*EEVGVQ
Trigger: TTGTACTCCCACTTCCTCCAAATCCATACAGTGAGG...CCCTGATTGTTTAGGGTGATAGGTCTTAAGCAGCATATATCTATATATCTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CAA 90 bp TGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTACTAGCAAGCAGTCTTaGGCTTTCATAAAAGTCTGG +
Preference number: 5 (lower is better)
Translates to: CMDLEEVGVQSLFNNLDFTSKQS*AFIKVW
Trigger: CCAGACTTTTATGAAAGCCAAAGACTGCTTGCTAGT...AAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CAA 90 bp CATATATCTATAAACACTCTGATTCCTCACTGTATGGATTTGGAGGAAGTGGGAACTAGCAAGCAGTCTTaGGCTTTCATAAAAGTCTGG +
Preference number: 5 (lower is better)
Translates to: HISINTLIPHCMDLEEVGTSKQS*AFIKVW
Trigger: CCAGACTTTTATGAAAGCCAAAGACTGCTTGCTAGT...TCCCACTTCCTCCAAATCCATACAGTGAGGAATCAGAGTGTTTATAGATATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS GCA 90 bp CAAGTTCATTACAAATTTATGTCTTACTTAAGCTTCCTTCCATCTTaGAGCGGAGCGAAGTCTCTTGGGTCAGATTTCTTCAACTATAAC +
Preference number: 5 (lower is better)
Translates to: QVHYKFMSYLSFLPS*SGAKSLGSDFFNYN
Trigger: GTTATAGTTGAAGAAATCTGACCCAAGAGACTTCGCTCCGCTGCAAGATGGAAGGAAGCTTAAGTAAGACATAAATTTGTAATGAACTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368357.7
CDS GCA 90 bp CACAAGATTATGTATGTAAAGCAAGGGCCAGGGGCACATAGCAGCTaGTCCATAAACTGTTACCATTATTATGATCAATCACAAATGATA +
Preference number: 5 (lower is better)
Translates to: HKIMYVKQGPGAHSS*SINCYHYYDQSQMI
Trigger: TATCATTTGTGATTGATCATAATAATGGTAACAGTTTATGGAGCAGCTGCTATGTGCCCCTGGCCCTTGCTTTACATACATAATCTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487635.1
CDS CCA 90 bp GAAAGAATATCATTATTGAAAGTGCTGCAAGAGTTGCTTCGTCCGTaGTATAAATCAGCATCTAGCCATAAACCAAATCGTCCCCTTAAA +
Preference number: 5 (lower is better)
Translates to: ERISLLKVLQELLRP*YKSASSHKPNRPLK
Trigger: TTTAAGGGGACGATTTGGTTTATGGCTAGATGCTGATTTATACCACGGACGAAGCAACTCTTGCAGCACTTTCAATAATGATATTCTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444128.2
CDS-3UTR CAA 90 bp CATATATCTATAAACACTCTGATTCCTCACTGTATGGATTTGGAGGAAGTGGGAGGGTCAAACATGATGTaGTTAGGAGTCACTATCATA +
Preference number: 5 (lower is better)
Translates to: HISINTLIPHCMDLEEVGGSNMM*LGVTII
Trigger: TATGATAGTGACTCCTAACAACATCATGTTTGACCC...TCCCACTTCCTCCAAATCCATACAGTGAGGAATCAGAGTGTTTATAGATATATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp TGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAACTTACTGAATGGGTaGATATCCTTTTCTGAAGCC +
Preference number: 5 (lower is better)
Translates to: CMDLEEVGVQSLFNNLDFNLLNG*ISFSEA
Trigger: GGCTTCAGAAAAGGATATCAACCCATTCAGTAAGTT...AAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp TGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCATTCCACCACCAGTTaGAGAAGAAAGTTCTTCCAA +
Preference number: 5 (lower is better)
Translates to: WRKWEYKVFSTTWILSFFHSTTS*RRKFFQ
Trigger: TTGGAAGAACTTTCTTCTCAAACTGGTGGTGGAATG...AAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp ATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGATTTCCACGGCAGAATaGTTTATTTGTGACTCAGCT +
Preference number: 5 (lower is better)
Translates to: MDLEEVGVQSLFNNLDFKISTAE*FICDSA
Trigger: AGCTGAGTCACAAATAAACAATTCTGCCGTGGAAAT...CTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp TGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTGGCTCACTGAAGAAGTaGTCAATCATGTTCAGTTCT +
Preference number: 5 (lower is better)
Translates to: WRKWEYKVFSTTWILSFFGSLKK*SIMFSS
Trigger: AGAACTGAACATGATTGACAACTTCTTCAGTGAGCC...AAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp CTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACAATTATAGTATCATCTTCCACAGCAATGTaGCACTTGTCTGGCTCTAAA +
Preference number: 5 (lower is better)
Translates to: LFYIENTASGYALTIIVSSSTAM*HLSGSK
Trigger: TTTAGAGCCAGACAAGTGCAACATTGCTGTGGAAGA...TGATACTATAATTGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp TGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTTCGAGCAAAATAACTTaGTTTCCGTTCCTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: WRKWEYKVFSTTWILSFFSSKIT*FPFLLL
Trigger: GAGAAGAAGGAACGGAAACAAAGTTATTTTGCTCGA...AAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp TGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTGGGTCAAACATGATGTaGTTAGGAGTCACTATCATA +
Preference number: 5 (lower is better)
Translates to: WRKWEYKVFSTTWILSFFGSNMM*LGVTII
Trigger: TATGATAGTGACTCCTAACAACATCATGTTTGACCC...AAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp TGTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTTCCTTGTTGATAGATTaGAACTTACTGAATGGGTTG +
Preference number: 5 (lower is better)
Translates to: CMDLEEVGVQSLFNNLDFSLLID*NLLNGL
Trigger: CAACCCATTCAGTAAGTTCAAATCTATCAACAAGGA...AAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp ATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTCCTTGTTGATAGATTaGAACTTACTGAATGGGTTG +
Preference number: 5 (lower is better)
Translates to: MDLEEVGVQSLFNNLDFKSLLID*NLLNGL
Trigger: CAACCCATTCAGTAAGTTCAAATCTATCAACAAGGA...CTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp CTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACAATTATAGTATCACATTCCACCACCAGTTaGAGAAGAAAGTTCTTCCAA +
Preference number: 5 (lower is better)
Translates to: LFYIENTASGYALTIIVSHSTTS*RRKFFQ
Trigger: TTGGAAGAACTTTCTTCTCAAACTGGTGGTGGAATG...TGATACTATAATTGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp TCTGGATATGCTCTCACAATTATAGTATCATGGACTAAACTAGGTCAGAGTGAAATTTCCACGGCAGAATaGTTTATTTGTGACTCAGCT +
Preference number: 5 (lower is better)
Translates to: SGYALTIIVSWTKLGQSEISTAE*FICDSA
Trigger: AGCTGAGTCACAAATAAACAATTCTGCCGTGGAAAT...TTCACTCTGACCTAGTTTAGTCCATGATACTATAATTGTGAGAGCATATCCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp GTATGGATTTGGAGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGATTTATTATCCATTaGTGCACCTTGACAGCTGTT +
Preference number: 5 (lower is better)
Translates to: VWIWRKWEYKVFSTTWILRFIIH*CTLTAV
Trigger: AACAGCTGTCAAGGTGCACAAATGGATAATAAATCT...TAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCTCCAAATCCATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp GAATGGACAATACTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACACTGACATTTTCAAAGTaGAGTTATATCTTACTGCCC +
Preference number: 5 (lower is better)
Translates to: EWTILFYIENTASGYALTLTFSK*SYILLP
Trigger: GGGCAGTAAGATATAACTCAACTTTGAAAATGTCAG...TGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAGTATTGTCCATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368357.7
CDS-3UTR CAA 90 bp ATACAGATATATAGATATATGCTGCTTAAGACCTATCACCCTAAACAATCAGGGACAGCAATGTTGCACTaGTCTGGCTCTAAAACTACT +
Preference number: 5 (lower is better)
Translates to: IQIYRYMLLKTYHPKQSGTAMLH*SGSKTT
Trigger: AGTAGTTTTAGAGCCAGACAAGTGCAACATTGCTGT...CCCTGATTGTTTAGGGTGATAGGTCTTAAGCAGCATATATCTATATATCTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp GAATGGACAATACTGTTTTACATAGAGAACACAGCATCTGGATATGCTCTCACAAAATGTACGCTTTTATaGACTAAATGGAAAGCTGGC +
Preference number: 5 (lower is better)
Translates to: EWTILFYIENTASGYALTKCTLL*TKWKAG
Trigger: GCCAGCTTTCCATTTAGTCAATAAAAGCGTACATTT...TGTGAGAGCATATCCAGATGCTGTGTTCTCTATGTAAAACAGTATTGTCCATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS-3UTR CAA 90 bp AAAACTTTAAAAGGCATCAAGGAGAGGGAGATCAAATTAAGGGAAGACATACTTGGACCTTGTTTAGTCTaGGATATTTCACCATCCTCT +
Preference number: 5 (lower is better)
Translates to: KTLKGIKEREIKLREDILGPCLV*DISPSS
Trigger: AGAGGATGGTGAAATATCCAAGACTAAACAAGGTCC...AAGTATGTCTTCCCTTAATTTGATCTCCCTCTCCTTGATGCCTTTTAAAGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392477.7
CDS-3UTR CAA 90 bp AGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTTCGAGCAAAATAACTTaGTTTCCGTTCCTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: RKWEYKVFSTTWILSFFLSSKIT*FPFLLL
Trigger: GAGAAGAAGGAACGGAAACAAAGTTATTTTGCTCGA...AAGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp AGGAAGTGGGAGTACAAAGTCTTTTCAACAACCTGGATTTTAAGTTTCTTTCTTAACTTACTGAATGGGTaGATATCCTTTTCTGAAGCC +
Preference number: 5 (lower is better)
Translates to: RKWEYKVFSTTWILSFFLNLLNG*ISFSEA
Trigger: GGCTTCAGAAAAGGATATCAACCCATTCAGTAAGTT...AAGAAAGAAACTTAAAATCCAGGTTGTTGAAAAGACTTTGTACTCCCACTTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp ATACAGATATATAGATATATGCTGCTTAAGACCTATCACCCTAAACAATCAGGGAGATTTATTATCCATTaGTGCACCTTGACAGCTGTT +
Preference number: 5 (lower is better)
Translates to: IQIYRYMLLKTYHPKQSGRFIIH*CTLTAV
Trigger: AACAGCTGTCAAGGTGCACAAATGGATAATAAATCT...CCCTGATTGTTTAGGGTGATAGGTCTTAAGCAGCATATATCTATATATCTGTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368357.7
ENST00000392477.7
CDS-3UTR CAA 90 bp ATACAGATATATAGATATATGCTGCTTAAGACCTATCACCCTAAACAATCAGGGAAATGTACGCTTTTATaGACTAAATGGAAAGCTGGC +
Preference number: 5 (lower is better)
Translates to: IQIYRYMLLKTYHPKQSGKCTLL*TKWKAG
Trigger: GCCAGCTTTCCATTTAGTCAATAAAAGCGTACATTT...CCCTGATTGTTTAGGGTGATAGGTCTTAAGCAGCATATATCTATATATCTGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS GCA 72 bp TCGGTCGCATGCATTTCTGGGAGCGGTGGCCTCTGCTaGTGGGCGCCGGGGAGCGCATCCTCTCGGCGGGTG +
Preference number: 6 (lower is better)
Translates to: SVACISGSGGLC*WAPGSASSRRV
Trigger: CACCCGCCGAGAGGATGCGCTCCCCGGCGCCCAGCAGCAGAGGCCACCGCTCCCAGAAATGCATGCGACCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417494.5
ENST00000453302.5
CDS GCA 72 bp CGGCTCCTGGGGTCCGGGAGAAGGGGATCGGTCGCATaGATTTCTGGGAGCGGTGGCCTCTGCTGCTGGGCG +
Preference number: 6 (lower is better)
Translates to: RLLGSGRRGSVA*ISGSGGLCCWA
Trigger: CGCCCAGCAGCAGAGGCCACCGCTCCCAGAAATGCATGCGACCGATCCCCTTCTCCCGGACCCCAGGAGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229634.13
ENST00000392477.7
ENST00000417494.5
ENST00000453302.5
CDS CCA 72 bp GTCGCATGCATTTCTGGGAGCGGTGGCCTCTGCTGCTaGGCGCCGGGGAGCGCATCCTCTCGGCGGGTGGAA +
Preference number: 6 (lower is better)
Translates to: VACISGSGGLCC*APGSASSRRVE
Trigger: TTCCACCCGCCGAGAGGATGCGCTCCCCGGCGCCCAGCAGCAGAGGCCACCGCTCCCAGAAATGCATGCGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417494.5
ENST00000453302.5
CDS CCA 72 bp CAGAGTGGGAATCTACAGGGCGGGGGCGCCGGCTCCTaGGGTCCGGGAGAAGGGGATCGGTCGCATGCATTT +
Preference number: 6 (lower is better)
Translates to: QSGNLQGGGAGS*GPGEGDRSHAF
Trigger: AAATGCATGCGACCGATCCCCTTCTCCCGGACCCCAGGAGCCGGCGCCCCCGCCCTGTAGATTCCCACTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453302.5
CDS CCA 72 bp AGCTGCTCGATGTGCATATTCTCCAGGAGCGCGCTGTaGGGCCGTAGGACAGGCAGCACCTCTTCGTCCTCG +
Preference number: 6 (lower is better)
Translates to: SCSMCIFSRSAL*GRRTGSTSSSS
Trigger: CGAGGACGAAGAGGTGCTGCCTGTCCTACGGCCCCACAGCGCGCTCCTGGAGAATATGCACATCGAGCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000433571.2
ENST00000438495.6
ENST00000444128.2
CDS GCA 72 bp GCTATAGGCCAGTCTCCATGGATACCCTTGCACCCTTaGAGGAAGGCGTCGGGCCAGCTGCTCGATGTGCAT +
Preference number: 6 (lower is better)
Translates to: AIGQSPWIPLHP*RKASGQLLDVH
Trigger: ATGCACATCGAGCAGCTGGCCCGACGCCTTCCTGCAAGGGTGCAAGGGTATCCATGGAGACTGGCCTATAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000433571.2
ENST00000438495.6
ENST00000444128.2
CDS CAA 72 bp TGCTATAGGCCAGTCTCCATGGATACCCTTGCACCCTaGCAGGAAGGCGTCGGGCCAGCTGCTCGATGTGCA +
Preference number: 6 (lower is better)
Translates to: CYRPVSMDTLAP*QEGVGPAARCA
Trigger: TGCACATCGAGCAGCTGGCCCGACGCCTTCCTGCAAGGGTGCAAGGGTATCCATGGAGACTGGCCTATAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000433571.2
ENST00000438495.6
ENST00000444128.2
CDS GCA 72 bp ACCCTCTCCCGAGGAACAGCAAACCAGTACTCTGGCTaGTTTCTCCGTTTGCCGTACTGCTGGACCATGGCT +
Preference number: 6 (lower is better)
Translates to: TLSRGTANQYSG*FLRLPYCWTMA
Trigger: AGCCATGGTCCAGCAGTACGGCAAACGGAGAAAGCAGCCAGAGTACTGGTTTGCTGTTCCTCGGGAGAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS GCA 72 bp GAACAGCAAACCAGTACTCTGGCTGCTTTCTCCGTTTaGCGTACTGCTGGACCATGGCTGCAGTGTGAGTGG +
Preference number: 6 (lower is better)
Translates to: EQQTSTLAAFSV*RTAGPWLQCEW
Trigger: CCACTCACACTGCAGCCATGGTCCAGCAGTACGGCAAACGGAGAAAGCAGCCAGAGTACTGGTTTGCTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS GCA 72 bp GGTAGAGCGTCTTTAAGCTGGTCCCGTGCTCTAACGTaGTATAGGCCAGTCTCCATGGATACCCTTGCACCC +
Preference number: 6 (lower is better)
Translates to: GRASLSWSRALT*YRPVSMDTLAP
Trigger: GGGTGCAAGGGTATCCATGGAGACTGGCCTATAGCACGTTAGAGCACGGGACCAGCTTAAAGACGCTCTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000433571.2
ENST00000438495.6
ENST00000444128.2
CDS CCA 72 bp ATCCACCCTCTCCCGAGGAACAGCAAACCAGTACTCTaGCTGCTTTCTCCGTTTGCCGTACTGCTGGACCAT +
Preference number: 6 (lower is better)
Translates to: IHPLPRNSKPVL*LLSPFAVLLDH
Trigger: ATGGTCCAGCAGTACGGCAAACGGAGAAAGCAGCCAGAGTACTGGTTTGCTGTTCCTCGGGAGAGGGTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS GCA 72 bp CAGGCAGCACCTCTTCGTCCTCGTCTTCATAGTAGCTaGATGTGCTCTTCCTGCGCTTTGCCTCTTCAACAG +
Preference number: 6 (lower is better)
Translates to: QAAPLRPRLHSS*MCSSCALPLQQ
Trigger: CTGTTGAAGAGGCAAAGCGCAGGAAGAGCACATGCAGCTACTATGAAGACGAGGACGAAGAGGTGCTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000433571.2
ENST00000438495.6
ENST00000444128.2
CDS CCA 72 bp CTAGTGATGCCGATTTCCGGTAGAGCGTCTTTAAGCTaGTCCCGTGCTCTAACGTGCTATAGGCCAGTCTCC +
Preference number: 6 (lower is better)
Translates to: LVMPISGRASLS*SRALTCYRPVS
Trigger: GGAGACTGGCCTATAGCACGTTAGAGCACGGGACCAGCTTAAAGACGCTCTACCGGAAATCGGCATCACTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000433571.2
ENST00000438495.6
ENST00000444128.2
CDS CCA 72 bp ATGATCCACCTCCCAAACACTGTGTGCAGCACCCATTaGCAGGGATTAGTCTGCAGTGGAAATGGACCCTCA +
Preference number: 6 (lower is better)
Translates to: MIHLPNTVCSTH*QGLVCSGNGPS
Trigger: TGAGGGTCCATTTCCACTGCAGACTAATCCCTGCCAATGGGTGCTGCACACAGTGTTTGGGAGGTGGATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433571.2
CDS CAA 90 bp GGGAGGGGCTCTCCCTTTTTCACCCAGGTCTTATCTGGCTCTTTATaGCCCTCAGTTATGGGATCACCCGCCTGGGAAAGAGAACTACTA +
Preference number: 6 (lower is better)
Translates to: GRGSPFFTQVLSGSL*PSVMGSPAWERELL
Trigger: TAGTAGTTCTCTTTCCCAGGCGGGTGATCCCATAACTGAGGGCAATAAAGAGCCAGATAAGACCTGGGTGAAAAAGGGAGAGCCCCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS GCA 72 bp CTCCCTTTTTCACCCAGGTCTTATCTGGCTCTTTATTaGCCTCAGTTATGGGATCACCCGCCTGGGAAAGAG +
Preference number: 6 (lower is better)
Translates to: LPFSPRSYLALY*PQLWDHPPGKE
Trigger: CTCTTTCCCAGGCGGGTGATCCCATAACTGAGGGCAATAAAGAGCCAGATAAGACCTGGGTGAAAAAGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS GCA 72 bp AACACTGTGTGCAGCACCCATTGGCAGGGATTAGTCTaGAGTGGAAATGGACCCTCAGCTATTCTCCAAAGC +
Preference number: 6 (lower is better)
Translates to: NTVCSTHWQGLV*SGNGPSAILQS
Trigger: GCTTTGGAGAATAGCTGAGGGTCCATTTCCACTGCAGACTAATCCCTGCCAATGGGTGCTGCACACAGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433571.2
CDS CCA 72 bp CAGCACCCATTGGCAGGGATTAGTCTGCAGTGGAAATaGACCCTCAGCTATTCTCCAAAGCTACTTGTCTCC +
Preference number: 6 (lower is better)
Translates to: QHPLAGISLQWK*TLSYSPKLLVS
Trigger: GGAGACAAGTAGCTTTGGAGAATAGCTGAGGGTCCATTTCCACTGCAGACTAATCCCTGCCAATGGGTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433571.2
CDS GCA 72 bp CTGCTTTCTCCGTTTGCCGTACTGCTGGACCATGGCTaGAGTGTGAGTGGCAAAGGATTTTCTCATTGGTTT +
Preference number: 6 (lower is better)
Translates to: LLSPFAVLLDHG*SVSGKGFSHWF
Trigger: AAACCAATGAGAAAATCCTTTGCCACTCACACTGCAGCCATGGTCCAGCAGTACGGCAAACGGAGAAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS GCA 72 bp GTCTTCATAGTAGCTGCATGTGCTCTTCCTGCGCTTTaGCTCTTCAACAGTGATGATCTCCCAGCTCTTGGT +
Preference number: 6 (lower is better)
Translates to: VFIVAACALPAL*LFNSDDLPALG
Trigger: ACCAAGAGCTGGGAGATCATCACTGTTGAAGAGGCAAAGCGCAGGAAGAGCACATGCAGCTACTATGAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000433571.2
CDS GCA 72 bp GAATGTGTACAAATGATCCACCTCCCAAACACTGTGTaGAGCACCCATTGGCAGGGATTAGTCTGCAGTGGA +
Preference number: 6 (lower is better)
Translates to: ECVQMIHLPNTV*STHWQGLVCSG
Trigger: TCCACTGCAGACTAATCCCTGCCAATGGGTGCTGCACACAGTGTTTGGGAGGTGGATCATTTGTACACATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433571.2
CDS CAA 72 bp TCTCCCTTTTTCACCCAGGTCTTATCTGGCTCTTTATaGCCCTCAGTTATGGGATCACCCGCCTGGGAAAGA +
Preference number: 6 (lower is better)
Translates to: SPFFTQVLSGSL*PSVMGSPAWER
Trigger: TCTTTCCCAGGCGGGTGATCCCATAACTGAGGGCAATAAAGAGCCAGATAAGACCTGGGTGAAAAAGGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS CAA 90 bp GCACCAGGACTGGATGATGATAGCCTTAAGGTACTGGAAGGAGAGTaGGCATCTGGCACAAAAAGGACCTGGCCTGGAACAATAGTATGT +
Preference number: 6 (lower is better)
Translates to: APGLDDDSLKVLEGE*ASGTKRTWPGTIVC
Trigger: ACATACTATTGTTCCAGGCCAGGTCCTTTTTGTGCCAGATGCCAACTCTCCTTCCAGTACCTTAAGGCTATCATCATCCAGTCCTGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000417494.5
CDS CCA 72 bp GGCTCTTTATTGCCCTCAGTTATGGGATCACCCGCCTaGGAAAGAGAACTACTAAGGGTAATGTCTATTCCC +
Preference number: 6 (lower is better)
Translates to: GSLLPSVMGSPA*ERELLRVMSIP
Trigger: GGGAATAGACATTACCCTTAGTAGTTCTCTTTCCCAGGCGGGTGATCCCATAACTGAGGGCAATAAAGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS GCA 72 bp GTCTTCATAGTAGCTGCATGTGCTCTTCCTGCGCTTTaGCTCTTCAACAGTGATGATCTTCACAAAAGGCTC +
Preference number: 6 (lower is better)
Translates to: VFIVAACALPAL*LFNSDDLHKRL
Trigger: GAGCCTTTTGTGAAGATCATCACTGTTGAAGAGGCAAAGCGCAGGAAGAGCACATGCAGCTACTATGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438495.6
ENST00000444128.2
CDS CAA 72 bp GTGTTTTCTACTCGGCTTTCTGGCGAACCAGACTGCTaGTCCACTTCTGGCATTATATCTTGCTTCTCACAG +
Preference number: 6 (lower is better)
Translates to: VFSTRLSGEPDC*STSGIISCFSQ
Trigger: CTGTGAGAAGCAAGATATAATGCCAGAAGTGGACAAGCAGTCTGGTTCGCCAGAAAGCCGAGTAGAAAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS CAA 72 bp ATCTCCCAGCTCTTGGTTGTTGGCTCACTGAAGAAGTaGTCAATCATGTTCAGTTCTTCCTTCTCCACCACC +
Preference number: 6 (lower is better)
Translates to: ISQLLVVGSLKK*SIMFSSSFSTT
Trigger: GGTGGTGGAGAAGGAAGAACTGAACATGATTGACAACTTCTTCAGTGAGCCAACAACCAAGAGCTGGGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000433571.2
CDS TCA 72 bp CTGCACCTGCATTTCCACGGCAGAATTGTTTATTTGTaGCTCAGCTTTCTTTCGTTCCTCTGGGTCAAGAGA +
Preference number: 6 (lower is better)
Translates to: LHLHFHGRIVYL*LSFLSFLWVKR
Trigger: TCTCTTGACCCAGAGGAACGAAAGAAAGCTGAGTCACAAATAAACAATTCTGCCGTGGAAATGCAGGTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS GCA 72 bp TTCTCTGTTCCCAAAAAGGCTAGGGCTGACTGCACCTaGATTTCCACGGCAGAATTGTTTATTTGTGACTCA +
Preference number: 6 (lower is better)
Translates to: FSVPKKARADCT*ISTAELFICDS
Trigger: TGAGTCACAAATAAACAATTCTGCCGTGGAAATGCAGGTGCAGTCAGCCCTAGCCTTTTTGGGAACAGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS GCA 72 bp AGTGTGTTTTCTACTCGGCTTTCTGGCGAACCAGACTaGTTGTCCACTTCTGGCATTATATCTTGCTTCTCA +
Preference number: 6 (lower is better)
Translates to: SVFSTRLSGEPD*LSTSGIISCFS
Trigger: TGAGAAGCAAGATATAATGCCAGAAGTGGACAAGCAGTCTGGTTCGCCAGAAAGCCGAGTAGAAAACACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS GCA 72 bp ACATCATTCTCTGTTCCCAAAAAGGCTAGGGCTGACTaGACCTGCATTTCCACGGCAGAATTGTTTATTTGT +
Preference number: 6 (lower is better)
Translates to: TSFSVPKKARAD*TCISTAELFIC
Trigger: ACAAATAAACAATTCTGCCGTGGAAATGCAGGTGCAGTCAGCCCTAGCCTTTTTGGGAACAGAGAATGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS CAA 90 bp ATGTTCAGTGTGTTTTCTACTCGGCTTTCTGGCGAACCAGACTGCTaGTCCACTTCTGGCATTATATCTTGCTTCTCACAGGTTTCTAAA +
Preference number: 6 (lower is better)
Translates to: MFSVFSTRLSGEPDC*STSGIISCFSQVSK
Trigger: TTTAGAAACCTGTGAGAAGCAAGATATAATGCCAGAAGTGGACAAGCAGTCTGGTTCGCCAGAAAGCCGAGTAGAAAACACACTGAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS TCA 72 bp GATGATGACTGCAAGTCACAGTGGCGGCGGATGTTGTaGGCAAGTTCATTACAAATTTATGTCTTACTTAAG +
Preference number: 6 (lower is better)
Translates to: DDDCKSQWRRML*ASSLQIYVLLK
Trigger: CTTAAGTAAGACATAAATTTGTAATGAACTTGCTCACAACATCCGCCGCCACTGTGACTTGCAGTCATCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368357.7
CDS TCA 72 bp TCTAAAACTACTGTATTATTATCTTCCTTCCCAGTATaGGTCCTTGTAGCTACAGCTGAGGCTGTCTCTGCA +
Preference number: 6 (lower is better)
Translates to: SKTTVLLSSFPV*VLVATAEAVSA
Trigger: TGCAGAGACAGCCTCAGCTGTAGCTACAAGGACTCATACTGGGAAGGAAGATAATAATACAGTAGTTTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000417494.5
ENST00000419660.1
ENST00000428318.1
ENST00000453302.5
ENST00000487635.1
CDS CCA 72 bp AGGTGTATGTCCTGTGGACTTCTCCAAAGGTACTATTaGTCTGGAATCCGAAGTCATAATTTTCTCTCCATT +
Preference number: 6 (lower is better)
Translates to: RCMSCGLLQRYY*SGIRSHNFLSI
Trigger: AATGGAGAGAAAATTATGACTTCGGATTCCAGACCAATAGTACCTTTGGAGAAGTCCACAGGACATACACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS CCA 72 bp TCATTATTGAAAGTGCTGCAAGAGTTGCTTCGTCCGTaGTATAAATCAGCATCTAGCCATAAACCAAATCGT +
Preference number: 6 (lower is better)
Translates to: SLLKVLQELLRP*YKSASSHKPNR
Trigger: ACGATTTGGTTTATGGCTAGATGCTGATTTATACCACGGACGAAGCAACTCTTGCAGCACTTTCAATAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000438495.6
ENST00000444128.2
CDS CAA 72 bp CAACTGAACTTCAGATTTATTATCCATTTGTGCACCTaGACAGCTGTTGTCCAGAGTAGATTCCAAAGAGGA +
Preference number: 6 (lower is better)
Translates to: QLNFRFIIHLCT*TAVVQSRFQRG
Trigger: TCCTCTTTGGAATCTACTCTGGACAACAGCTGTCAAGGTGCACAAATGGATAATAAATCTGAAGTTCAGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS TCA 72 bp TCACACCCATTTTCAATAACCAGAGGATCAGATTTATaGGGGTCAAACATGATGTTGTTAGGAGTCACTATC +
Preference number: 6 (lower is better)
Translates to: SHPFSITRGSDL*GSNMMLLGVTI
Trigger: GATAGTGACTCCTAACAACATCATGTTTGACCCTCATAAATCTGATCCTCTGGTTATTGAAAATGGGTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
CDS GCA 72 bp ATAGTGGTCACTGAACTTGAAAGGATGAGTTGCATATaGTCCAAAAATCTGATTATCCATATCTTTGATGAC +
Preference number: 6 (lower is better)
Translates to: IVVTELERMSCI*SKNLIIHIFDD
Trigger: GTCATCAAAGATATGGATAATCAGATTTTTGGAGCATATGCAACTCATCCTTTCAAGTTCAGTGACCACTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000229634.13
ENST00000368357.7
ENST00000392477.7
ENST00000433571.2
ENST00000438495.6
ENST00000444128.2
CDS GCA 72 bp TCTCATCAGTCATATATTCCTCTTCCACAGCAATGTTaGACTTGTCTGGCTCTAAAACTACTGTATTATTAT +
Preference number: 6 (lower is better)
Translates to: SHQSYIPLPQQC*TCLALKLLYYY
Trigger: ATAATAATACAGTAGTTTTAGAGCCAGACAAGTGCAACATTGCTGTGGAAGAGGAATATATGACTGATGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368357.7
ENST00000392477.7
ENST00000417494.5
ENST00000419660.1
ENST00000428318.1
ENST00000453302.5
ENST00000487635.1