RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NCOA6 (Homo sapiens)

Ensembl gene IDs: ENSG00000198646

Ensembl transcript IDs: ENST00000359003.7, ENST00000374796.6, ENST00000434040.5, ENST00000471897.1, ENST00000593786.1, ENST00000612493.4, ENST00000616167.1, ENST00000626057.1, ENST00000628752.2

Found 1141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCAGGGCTCAACAGTCCTaGTTTCCCCATTGCACTTTA +
Preference number: 2 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFRAQQS*FPHCTL
Trigger: TAAAGTGCAATGGGGAAAGCAGGACTGTTGAGCCCT...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
3UTR-3UTR GCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGAGGGCTCAACAGTCCTaGTTTCCCCATTGCACTTTA +
Preference number: 2 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQRAQQS*FPHCTL
Trigger: TAAAGTGCAATGGGGAAAGCAGGACTGTTGAGCCCT...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
3UTR-3UTR GCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCAGGGCTCAACAGTCCTaGTTTCCCCATTGCACTTTA +
Preference number: 2 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLRAQQS*FPHCTL
Trigger: TAAAGTGCAATGGGGAAAGCAGGACTGTTGAGCCCT...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
3UTR-3UTR TCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTCCCCATTGCACTTTATaGAACAGGTTGCAGGGACTA +
Preference number: 2 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCPHCTL*NRLQGL
Trigger: TAGTCCCTGCAACCTGTTTCATAAAGTGCAATGGGG...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
3UTR-3UTR GCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCCCTGTACTCTAGGCTaGTTAGGAAATGTGAAAACT +
Preference number: 2 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFPCTLG*LGNVKT
Trigger: AGTTTTCACATTTCCTAAGCAGCCTAGAGTACAGGG...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
3UTR-3UTR GCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTACCCTGTACTCTAGGCTaGTTAGGAAATGTGAAAACT +
Preference number: 2 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLPCTLG*LGNVKT
Trigger: AGTTTTCACATTTCCTAAGCAGCCTAGAGTACAGGG...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
3UTR-3UTR CAA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCAGTCCTGCTTTCCCCATaGCACTTTATGAAACAGGTT +
Preference number: 3 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAVLLSP*HFMKQV
Trigger: AACCTGTTTCATAAAGTGCAATGGGGAAAGCAGGAC...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
3UTR-3UTR CAA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAACATTTTAGAAACCTaGAACTTCAACTCGCAACAC +
Preference number: 3 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHNILET*NFNSQH
Trigger: GTGTTGCGAGTTGAAGTTCAAGGTTTCTAAAATGTT...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
3UTR-3UTR CAA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGAACATTTTAGAAACCTaGAACTTCAACTCGCAACAC +
Preference number: 3 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQNILET*NFNSQH
Trigger: GTGTTGCGAGTTGAAGTTCAAGGTTTCTAAAATGTT...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
3UTR-3UTR CAA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTAACATTTTAGAAACCTaGAACTTCAACTCGCAACAC +
Preference number: 3 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCNILET*NFNSQH
Trigger: GTGTTGCGAGTTGAAGTTCAAGGTTTCTAAAATGTT...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCCCGTCAGTCCTCGCGTaGGCCCGTCTGTCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPPSVLA*ARLSRR
Trigger: GCGGCGGGACAGACGGGCGCACGCGAGGACTGACGG...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000612493.4
CDS-3UTR CCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCTGGGCTGGGCCCTGGTaGCCGCAGGACCTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPWAGPW*PQDLSL
Trigger: CAGGGACAGGTCCTGCGGCCACCAGGGCCCAGCCCA...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCCTGCTGGGCCATGTGTaGGCTGGGCCCTGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPLLGHV*AGPWWP
Trigger: CGGCCACCAGGGCCCAGCCCACACATGGCCCAGCAG...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACTGCTGGGCCATGTGTaGGCTGGGCCCTGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTALLGHV*AGPWWP
Trigger: CGGCCACCAGGGCCCAGCCCACACATGGCCCAGCAG...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCCGTCAGTCCTCGCGTaGGCCCGTCTGTCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFPSVLA*ARLSRR
Trigger: GCGGCGGGACAGACGGGCGCACGCGAGGACTGACGG...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000612493.4
CDS-3UTR TCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCAGGTGGCTGCTGCTGCTaGGGCAGTTGTGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAGGCCC*GSCGCG
Trigger: GCCACAGCCACAACTGCCTCAGCAGCAGCAGCCACC...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTGCCCGCCGCCCTCGGTaGGTCCGTCCGTCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTARRPR*VRPSVL
Trigger: GAGGACTGACGGACGGACGCACCGAGGGCGGCGGGC...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000612493.4
CDS-3UTR GCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCGCCCGCCGCCCTCGGTaGGTCCGTCCGTCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLARRPR*VRPSVL
Trigger: GAGGACTGACGGACGGACGCACCGAGGGCGGCGGGC...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000612493.4
CDS-3UTR CCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCCTGCTGCAAGGGAGTTaGGACCCTAGAGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPLLQGS*DPRGPS
Trigger: GGAGGGCCCTCTAGGGTCCCAACTCCCTTGCAGCAG...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCAGCCCATCAGCTGAGATaGTGGGCCCTGCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAAHQLR*WALLGL
Trigger: CAGCCCCAGCAGGGCCCACCATCTCAGCTGATGGGC...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCCTGCTGTGGTGGCTGTaGTGGGGGTGCCACATGCTG +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPLLWWL*WGCHML
Trigger: CAGCATGTGGCACCCCCACCACAGCCACCACAGCAG...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCCCGCCAGTGGCGAGCTaGAAGGATTCTGCGGGCTCT +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPPPVAS*KDSAGS
Trigger: AGAGCCCGCAGAATCCTTCCAGCTCGCCACTGGCGG...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGTGCATGCCCATCAGCTaGGATGGTGGGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRCMPIS*DGGPCW
Trigger: CCAGCAGGGCCCACCATCTCAGCTGATGGGCATGCA...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCGGTCTTGCCTGGAGTTaGTGTTGCATTGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPGLAWS*CCIGPG
Trigger: GCCCGGCCCAATGCAACAGCAACTCCAGGCAAGACC...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCGGGCTGCATCATATTTaGCGGCCCGTGGGACACCTG +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPGLHHI*RPVGHL
Trigger: CAGGTGTCCCACGGGCCGCCAAATATGATGCAGCCC...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCAGATGGTGGGCCCTGCTaGGGCTGGCCTTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTADGGPC*GWPCML
Trigger: CAACATGCAAGGCCAGCCCCAGCAGGGCCCACCATC...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCTGGACCATCTGGCCCTaGGAGGGCACGATTTGCTGG +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPWTIWP*EGTICW
Trigger: CCAGCAAATCGTGCCCTCCCAGGGCCAGATGGTCCA...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTGGGCTGGGCCCTGGTaGCCGCAGGACCTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLWAGPW*PQDLSL
Trigger: CAGGGACAGGTCCTGCGGCCACCAGGGCCCAGCCCA...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGCTGCTGGGCCATGTGTaGGCTGGGCCCTGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQLLGHV*AGPWWP
Trigger: CGGCCACCAGGGCCCAGCCCACACATGGCCCAGCAG...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGCTGACTGGGAGGTGGTaGCTGCTGCTGCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRLTGRW*LLLLRQ
Trigger: CTGCCTCAGCAGCAGCAGCCACCACCTCCCAGTCAG...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCGGTGGCCGTGAGAGCTaGGCAGGGAATTTACAGGGG +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPGGRES*AGNLQG
Trigger: CCCCTGTAAATTCCCTGCCCAGCTCTCACGGCCACC...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGTCCGACCCGGAGAGCTaGCAGGCTGCTGAAATCCCT +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRSDPES*QAAEIP
Trigger: AGGGATTTCAGCAGCCTGTCAGCTCTCCGGGTCGGA...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCAGGAGGACCAGCTCCTTaGCCACCTGCATGCTGGACA +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAGGPAP*PPACWT
Trigger: TGTCCAGCATGCAGGTGGTCAAGGAGCTGGTCCTCC...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCAGGGCTGGTCCCGGCATaGCATTGGACTGGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAGLVPA*HWTGSE
Trigger: CTCAGAACCAGTCCAATGTCATGCCGGGACCAGCCC...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACCAGGCAACGGTGGCTaGTCAGCCTCTTCCAGACCA +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAPGNGG*SASSRP
Trigger: TGGTCTGGAAGAGGCTGATCAGCCACCGTTGCCTGG...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGCCAGGCAACGGTGGCTaGTCAGCCTCTTCCAGACCA +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRPGNGG*SASSRP
Trigger: TGGTCTGGAAGAGGCTGATCAGCCACCGTTGCCTGG...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCAGTGAGGTGGGGCTGCTaGAAGGGAGTTGGGACCCTA +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAVRWGC*KGVGTL
Trigger: TAGGGTCCCAACTCCCTTGCAGCAGCCCCACCTCAC...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGTTGGTGAGGTGGGGCTaGTGCAAGGGAGTTGGGACC +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRLVRWG*CKGVGT
Trigger: GGTCCCAACTCCCTTGCAGCAGCCCCACCTCACCAA...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCGTAGCAGGATCACCATaGTGCTGGGCCATGTGTGGG +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPVAGSP*CWAMCG
Trigger: CCCACACATGGCCCAGCAGCATGGTGATCCTGCTAC...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCAGCTGCAGCTCTGGATTaGGGCCTGGTGCCATCATGG +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAAAALD*GLVPSW
Trigger: CCATGATGGCACCAGGCCCCAATCCAGAGCTGCAGC...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCCAGCTGGTTCCAGCCTaGAGGAACAGGCACCTGAGT +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPQLVPA*RNRHLS
Trigger: ACTCAGGTGCCTGTTCCTCCAGGCTGGAACCAGCTG...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGCAGAGAACCCTGGGCTaGAGGAGGTTGAAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRQRTLG*RRLKGS
Trigger: GGAGCCCTTCAACCTCCTCCAGCCCAGGGTTCTCTG...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCGGGCCCTGCTGGGGCTaGCCTTGCATGTTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFGPCWG*PCMLLR
Trigger: CCTCAGCAACATGCAAGGCCAGCCCCAGCAGGGCCC...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCGCCCATCAGCTGAGATaGTGGGCCCTGCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFAHQLR*WALLGL
Trigger: CAGCCCCAGCAGGGCCCACCATCTCAGCTGATGGGC...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCTGTTGCTGGACCATCTaGCCCTGGGAGGGCACGATT +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPCCWTI*PWEGTI
Trigger: AATCGTGCCCTCCCAGGGCCAGATGGTCCAGCAACA...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCGGTGGGGTCATCCTTTaGGGCGAGGGCCCAAGATTT +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPGGVIL*GEGPRF
Trigger: AAATCTTGGGCCCTCGCCCCAAAGGATGACCCCACC...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTTGGGCTGGGCCCTGGTaGCCGCAGGACCTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCWAGPW*PQDLSL
Trigger: CAGGGACAGGTCCTGCGGCCACCAGGGCCCAGCCCA...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTGTGTGGGCTGGGCCCTaGTGGCCGCAGGACCTGTCC +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCVWAGP*WPQDLS
Trigger: GGACAGGTCCTGCGGCCACCAGGGCCCAGCCCACAC...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCGCGACGGGGCTATGCTaGGTAGAAGTTCTGGATGGG +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPATGLC*VEVLDG
Trigger: CCCATCCAGAACTTCTACCCAGCATAGCCCCGTCGC...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACTTCCCGGGGGATGTTaGATGTCACACGCACGCTGT +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTALPGGC*MSHARC
Trigger: ACAGCGTGCGTGTGACATTCAACATCCCCCGGGAAG...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCTCCATTGCATCTGACTaGGAAGCAGGGCGAGGAGTC +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPSIASD*EAGRGV
Trigger: GACTCCTCGCCCTGCTTCTCAGTCAGATGCAATGGA...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCGGCCTTGCATGTTGCTaGGGTTCACTTGAGGAACCC +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPGLACC*GSLEEP
Trigger: GGGTTCCTCAAGTGAACCTCAGCAACATGCAAGGCC...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTGCATGCCCATCAGCTaGGATGGTGGGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLCMPIS*DGGPCW
Trigger: CCAGCAGGGCCCACCATCTCAGCTGATGGGCATGCA...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACGGTGGCTGCTGCTGCTaGGGCAGTTGTGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHGGCCC*GSCGCG
Trigger: GCCACAGCCACAACTGCCTCAGCAGCAGCAGCCACC...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCTGCTGCACAGGGGGATaGGAAGGGACAACTGGAGAA +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPCCTGG*EGTTGE
Trigger: TTCTCCAGTTGTCCCTTCTCATCCCCCTGTGCAGCA...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCAGTAGAGCTGGAGGCTaGAGCAGGTCGAGAAGATCG +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPSRAGG*SRSRRS
Trigger: CGATCTTCTCGACCTGCTTCAGCCTCCAGCTCTACT...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGTGGGAGGGCACGATTTaGTGGTGCATGCCCATCAGC +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRWEGTI*WCMPIS
Trigger: GCTGATGGGCATGCACCAGCAAATCGTGCCCTCCCA...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCATGGCTGTGGTGGGGGTaGCACATGCTGCATGAGTTG +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAWLWWG*HMLHEL
Trigger: CAACTCATGCAGCATGTGGCACCCCCACCACAGCCA...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCCTGCTGATGTTGCTGTaGGGGTCTTGCCTGCAACTG +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPLLMLL*GSCLQL
Trigger: CAGTTGCAGGCAAGACCCCCACAGCAACATCAGCAG...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTCTGCTGCAAGGGAGTTaGGACCCTAGAGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLLLQGS*DPRGPS
Trigger: GGAGGGCCCTCTAGGGTCCCAACTCCCTTGCAGCAG...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCTGGCCCCTGGTTTGGTaGTTGCTGCTGCATCACCAT +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPWPLVW*LLLHHH
Trigger: ATGGTGATGCAGCAGCAACCACCAAACCAGGGGCCA...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACTGTGGCCCCTGGTTTaGTGGTTGCTGCTGCATCAC +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTALWPLV*WLLLHH
Trigger: GTGATGCAGCAGCAACCACCAAACCAGGGGCCACAG...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCCTGAATTCCCAGGGGTaGTTGCTGTGGTCGAAGGCA +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPLNSQG*LLWSKA
Trigger: TGCCTTCGACCACAGCAACCACCCCTGGGAATTCAG...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACGGGCCCTGCTGGGGCTaGCCTTGCATGTTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHGPCWG*PCMLLR
Trigger: CCTCAGCAACATGCAAGGCCAGCCCCAGCAGGGCCC...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCCATCAGCTGAGATGGTaGGCCCTGCTGGGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLHQLRW*ALLGLA
Trigger: GGCCAGCCCCAGCAGGGCCCACCATCTCAGCTGATG...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCCTCTTCCAGACCAGCTaGGCGAGTATCTGGGGTGTT +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPLFQTS*ASIWGV
Trigger: AACACCCCAGATACTCGCCCAGCTGGTCTGGAAGAG...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTCTGCTGTGGTGGCTGTaGTGGGGGTGCCACATGCTG +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLLLWWL*WGCHML
Trigger: CAGCATGTGGCACCCCCACCACAGCCACCACAGCAG...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCCGCCAGTGGCGAGCTaGAAGGATTCTGCGGGCTCT +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFPPVAS*KDSAGS
Trigger: AGAGCCCGCAGAATCCTTCCAGCTCGCCACTGGCGG...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGGCCTCCTGGGACAGATaGTGCTTCACTGCCACTTGC +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRASWDR*CFTATC
Trigger: GCAAGTGGCAGTGAAGCACCATCTGTCCCAGGAGGC...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGCTGAAGGTTCTGTGCTaGGAGGGCGGTTGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRLKVLC*EGGCWV
Trigger: CACCCAACAACCGCCCTCCCAGCACAGAACCTTCAG...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGTGGATCCATTGCATCTaGCTGAGAAGCAGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRWIHCI*LRSRAR
Trigger: CCTCGCCCTGCTTCTCAGTCAGATGCAATGGATCCA...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCATGGATCCATTGCATCTaGCTGAGAAGCAGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAWIHCI*LRSRAR
Trigger: CCTCGCCCTGCTTCTCAGTCAGATGCAATGGATCCA...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCACAGGCTGCATTGGGTaGTGTGGGGGAGCTAAAGAT +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPTGCIG*CGGAKD
Trigger: ATCTTTAGCTCCCCCACATCACCCAATGCAGCCTGT...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCATGTGGCTGTTGCTGCTaGTGTTGCTGTGGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTACGCCC*CCCGGL
Trigger: AAGACCCCCACAGCAACATCAGCAGCAACAGCCACA...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCAGGAGACTTGTTGGTaGGGTGGGGCTGCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFQETCW*GGAAAR
Trigger: CCTTGCAGCAGCCCCACCTCACCAACAAGTCTCCTG...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGCAGCTGAGGGGCTCCTaGATTCCCAGGGGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQQLRGS*IPRGGC
Trigger: GCAACCACCCCTGGGAATTCAGGAGCCCCTCAGCTG...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTGCATGCCCATCAGCTaGGATGGTGGGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLCMPIS*DGGPCW
Trigger: CCAGCAGGGCCCACCATCTCAGCTGATGGGCATGCA...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTGGGCTGGTCCCGGCATaGCATTGGACTGGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLGLVPA*HWTGSE
Trigger: CTCAGAACCAGTCCAATGTCATGCCGGGACCAGCCC...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGTGCTGCACAGGGGGATaGGAAGGGACAACTGGAGAA +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRCCTGG*EGTTGE
Trigger: TTCTCCAGTTGTCCCTTCTCATCCCCCTGTGCAGCA...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCGAGGGAAGAGTGTTCTaGTCTGCTGAGGTGTTCACC +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPEGRVF*SAEVFT
Trigger: GGTGAACACCTCAGCAGATCAGAACACTCTTCCCTC...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTCGGTACGGCGGAGATaGGCTCGGAGGGTACCAGAG +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLSVRRR*ARRVPE
Trigger: CTCTGGTACCCTCCGAGCTCATCTCCGCCGTACCGA...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCTGTTGTTGTTGTTGCTaGTGCTGCTGCAGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPCCCCC*CCCSWG
Trigger: TCCCCAGCTGCAGCAGCAGCAGCAACAACAACAACA...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCGATGCAGGGGATCCCTaGTGGAAGGAGGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFDAGDP*WKEEGE
Trigger: CTCACCCTCCTCCTTCCAGCAGGGATCCCCTGCATC...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCCCATGAGGCTGGGCTaGATCATATTTGGCGGCCCG +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFPMRLG*IIFGGP
Trigger: CGGGCCGCCAAATATGATGCAGCCCAGCCTCATGGG...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCTGCTGGGAAAGCATCTaGTTGGGTGGGGTCATCCTT +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPCWESI*LGGVIL
Trigger: AAGGATGACCCCACCCAAGCAGATGCTTTCCCAGCA...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCGCAGGATCACCATGCTaGTGGGCCATGTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFAGSPC*WAMCGL
Trigger: CAGCCCACACATGGCCCAGCAGCATGGTGATCCTGC...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTCTGGGCTTCGCCGGTTaGCAGAGGACCCTGGACTAT +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLLGFAG*QRTLDY
Trigger: ATAGTCCAGGGTCCTCTGGCAACCGGCGAAGCCCAG...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCTGCTGCTGCTGCAGCTaGGGAAAATTAGCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPCCCCS*GKLAGF
Trigger: GAACCCAGCTAATTTTCCCCAGCTGCAGCAGCAGCA...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGGTTGGGGCAGTAAACTaGGGTCGAATTCCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRVGAVN*GRIPCG
Trigger: GCCACAGGGAATTCGACCCCAGTTTACTGCCCCAAC...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCAGAGAACCCTGGGCTaGAGGAGGTTGAAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFQRTLG*RRLKGS
Trigger: GGAGCCCTTCAACCTCCTCCAGCCCAGGGTTCTCTG...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCCTGCTGCAAGGGAGTTaGGACCCTAGAGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLLLQGS*DPRGPS
Trigger: GGAGGGCCCTCTAGGGTCCCAACTCCCTTGCAGCAG...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTGGGCCCTGCTGGGGCTaGCCTTGCATGTTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCGPCWG*PCMLLR
Trigger: CCTCAGCAACATGCAAGGCCAGCCCCAGCAGGGCCC...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCGATGGTGGGCCCTGCTaGGGCTGGCCTTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLDGGPC*GWPCML
Trigger: CAACATGCAAGGCCAGCCCCAGCAGGGCCCACCATC...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTACATCAGCTGAGATGGTaGGCCCTGCTGGGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLHQLRW*ALLGLA
Trigger: GGCCAGCCCCAGCAGGGCCCACCATCTCAGCTGATG...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTGCCCATCAGCTGAGATaGTGGGCCCTGCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCAHQLR*WALLGL
Trigger: CAGCCCCAGCAGGGCCCACCATCTCAGCTGATGGGC...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCAAAGGTTCCTTGTTGCTaGACCATCTGGCCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAKVPCC*TIWPWE
Trigger: CTCCCAGGGCCAGATGGTCCAGCAACAAGGAACCTT...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCAGGGTTCACCATCATCTaGCCCTGTGGCATAAGCTGG +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAGFTII*PCGISW
Trigger: CCAGCTTATGCCACAGGGCCAGATGATGGTGAACCC...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCAAAGCATCTGCTTGGGTaGGGTCATCCTTTGGGGCGA +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAKHLLG*GHPLGR
Trigger: TCGCCCCAAAGGATGACCCCACCCAAGCAGATGCTT...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCGTGTGGGCTGGGCCCTaGTGGCCGCAGGACCTGTCC +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVVWAGP*WPQDLS
Trigger: GGACAGGTCCTGCGGCCACCAGGGCCCAGCCCACAC...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACTCTTCCAGACCAGCTaGGCGAGTATCTGGGGTGTT +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTALFQTS*ASIWGV
Trigger: AACACCCCAGATACTCGCCCAGCTGGTCTGGAAGAG...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTCTGTGGTGGCTGTGGTaGGGGTGCCACATGCTGCAT +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLLWWLW*GCHMLH
Trigger: ATGCAGCATGTGGCACCCCCACCACAGCCACCACAG...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCTGTGGTGGCTGTGGTaGGGGTGCCACATGCTGCAT +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFLWWLW*GCHMLH
Trigger: ATGCAGCATGTGGCACCCCCACCACAGCCACCACAG...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCTGCATGGGCATTCTCTaGGAGTCGGGGTTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFCMGIL*ESGFRG
Trigger: CCCCCTGAACCCCGACTCCCAGAGAATGCCCATGCA...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTGCATGGGCATTCTCTaGGAGTCGGGGTTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLCMGIL*ESGFRG
Trigger: CCCCCTGAACCCCGACTCCCAGAGAATGCCCATGCA...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGTGCCACTCTGTTGCATaGGCATTCTCTGGGAGTCGG +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRCHSVA*AFSGSR
Trigger: CCGACTCCCAGAGAATGCCCATGCAACAGAGTGGCA...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCTTGGGCCTAGATGTCTaGGTTGGCGCAGCCACATTT +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPLGLDV*VGAATF
Trigger: AAATGTGGCTGCGCCAACCCAGACATCTAGGCCCAA...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCATCCCAGGGCTTGGAGTaGTTTTCCTACTGGACCCAG +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTASQGLE*FSYWTQ
Trigger: CTGGGTCCAGTAGGAAAACCACTCCAAGCCCTGGGA...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCGGGTGCTGGGGGCGTTaGGGTTTTACTGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFGCWGR*GFTVQL
Trigger: GAGCTGGACAGTAAAACCCCAACGCCCCCAGCACCC...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTCACCGCCAGGTAAGCTaGGTCCTGCTGAGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTHRQVS*VLLRQC
Trigger: GCACTGCCTCAGCAGGACCCAGCTTACCTGGCGGTG...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCTCGAGCGTACACTGGTaGGGAGAGCACCGCCAGGTA +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFSSVHW*GEHRQV
Trigger: TACCTGGCGGTGCTCTCCCCACCAGTGTACGCTCGA...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCTATCGAGCGTACACTaGTGGGGAGAGCACCGCCAG +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFLSSVH*WGEHRQ
Trigger: CTGGCGGTGCTCTCCCCACCAGTGTACGCTCGATAG...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCGGTGGCGCATGCCTGTaGTCTCAACTGGCATGGGAG +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFGGACL*SQLAWE
Trigger: CTCCCATGCCAGTTGAGACCACAGGCATGCGCCACC...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS-3UTR TCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCGACCCGGAGAGCTaGCAGGCTGCTGAAATCCCT +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTSDPES*QAAEIP
Trigger: AGGGATTTCAGCAGCCTGTCAGCTCTCCGGGTCGGA...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCAGTGGTCGAAGGCACCTaGCCTTGCATAAAGTTCGGA +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAVVEGT*PCIKFG
Trigger: TCCGAACTTTATGCAAGGTCAGGTGCCTTCGACCAC...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGGTGGTCGAAGGCACCTaGCCTTGCATAAAGTTCGGA +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRVVEGT*PCIKFG
Trigger: TCCGAACTTTATGCAAGGTCAGGTGCCTTCGACCAC...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTCAGCTGAGGGGCTCCTaGATTCCCAGGGGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCQLRGS*IPRGGC
Trigger: GCAACCACCCCTGGGAATTCAGGAGCCCCTCAGCTG...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTGGAGGACCAGCTCCTTaGCCACCTGCATGCTGGACA +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTGGPAP*PPACWT
Trigger: TGTCCAGCATGCAGGTGGTCAAGGAGCTGGTCCTCC...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGGGAGGACCAGCTCCTTaGCCACCTGCATGCTGGACA +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQGGPAP*PPACWT
Trigger: TGTCCAGCATGCAGGTGGTCAAGGAGCTGGTCCTCC...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCCATAAGCTGGGCCCTTaGAAGGATCATAGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPHKLGP*KDHRVL
Trigger: CAGAACCCTATGATCCTTTCAAGGGCCCAGCTTATG...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACGGGCTGGTCCCGGCATaGCATTGGACTGGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHGLVPA*HWTGSE
Trigger: CTCAGAACCAGTCCAATGTCATGCCGGGACCAGCCC...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCACTTGCTTCAGGGAGTaGGGCCATCTCCGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLTCFRE*GHLRQW
Trigger: CCACTGGCGGAGATGGCCTCACTCCCTGAAGCAAGT...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACCAGAGGAGTGGGACTaGCCAATACATTTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAPEEWD*PIHFSA
Trigger: TGCCGAGAAATGTATTGGTCAGTCCCACTCCTCTGG...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGGGCCGGGCATTAGACTaGGCAGCTGACTGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQGRALD*AADCPS
Trigger: TGAGGGACAGTCAGCTGCTCAGTCTAATGCCCGGCC...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCAACAGGGGTGGCTCGTaGGCTAAGGACCAAAGGTCG +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFNRGGS*AKDQRS
Trigger: CGACCTTTGGTCCTTAGCTCACGAGCCACCCCTGTT...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTGGAGGGGAAGGAAGCTaGACAGGGGTGGCTCGTGAG +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCGGEGS*TGVARE
Trigger: CTCACGAGCCACCCCTGTTCAGCTTCCTTCCCCTCC...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTAGGAGGGGAAGGAAGCTaGACAGGGGTGGCTCGTGAG +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLGGEGS*TGVARE
Trigger: CTCACGAGCCACCCCTGTTCAGCTTCCTTCCCCTCC...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCAAGTGTTCTGATCTGCTaGGGTGTTCACCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTASVLIC*GVHLRA
Trigger: AGCCCTCAGGTGAACACCTCAGCAGATCAGAACACT...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTTCGGTACGGCGGAGATaGGCTCGGAGGGTACCAGAG +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCSVRRR*ARRVPE
Trigger: CTCTGGTACCCTCCGAGCTCATCTCCGCCGTACCGA...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCTATTCCTGGACCACTTaGCATAGGAAATCCCGCCTC +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPYSWTT*HRKSRL
Trigger: GAGGCGGGATTTCCTATGGCAAGTGGTCCAGGAATA...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCTGTTGTTGTTGCTGCTaGTGCTGCAGCTGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPCCCCC*CCSWGK
Trigger: TTTTCCCCAGCTGCAGCAGCAGCAGCAACAACAACA...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTGGTCTTGCCTGGAGTTaGTGTTGCATTGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTGLAWS*CCIGPG
Trigger: GCCCGGCCCAATGCAACAGCAACTCCAGGCAAGACC...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGTGGGCTTGTGAGGCTTaGTGGCTGCCAAAGGGATAT +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRWACEA*WLPKGY
Trigger: ATATCCCTTTGGCAGCCAGCAAGCCTCACAAGCCCA...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGGTGAGGTGGGGCTGCTaGAAGGGAGTTGGGACCCTA +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQVRWGC*KGVGTL
Trigger: TAGGGTCCCAACTCCCTTGCAGCAGCCCCACCTCAC...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACTTGGTGAGGTGGGGCTaGTGCAAGGGAGTTGGGACC +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHLVRWG*CKGVGT
Trigger: GGTCCCAACTCCCTTGCAGCAGCCCCACCTCACCAA...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTTGGTGAGGTGGGGCTaGTGCAAGGGAGTTGGGACC +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQLVRWG*CKGVGT
Trigger: GGTCCCAACTCCCTTGCAGCAGCCCCACCTCACCAA...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTCCCATGAGGCTGGGCTaGATCATATTTGGCGGCCCG +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTPMRLG*IIFGGP
Trigger: CGGGCCGCCAAATATGATGCAGCCCAGCCTCATGGG...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACCCCATGAGGCTGGGCTaGATCATATTTGGCGGCCCG +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHPMRLG*IIFGGP
Trigger: CGGGCCGCCAAATATGATGCAGCCCAGCCTCATGGG...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGCGATTTGCTGGTGCATaGCCATCAGCTGAGATGGTG +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRRFAGA*PSAEMV
Trigger: CACCATCTCAGCTGATGGGCATGCACCAGCAAATCG...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGCAGATGGTGCTTCACTaGCACTTGCTTCAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRQMVLH*HLLQGV
Trigger: CACTCCCTGAAGCAAGTGGCAGTGAAGCACCATCTG...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCTGGAGGGATGCTTGGTaGAACGTTAGAACTGACCTC +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPWRDAW*NVRTDL
Trigger: GAGGTCAGTTCTAACGTTGCACCAAGCATCCCTCCA...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGCTGGGCTTCGCCGGTTaGCAGAGGACCCTGGACTAT +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQLGFAG*QRTLDY
Trigger: ATAGTCCAGGGTCCTCTGGCAACCGGCGAAGCCCAG...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCATCTGCGACGGGGCTATaGTGGGTAGAAGTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTASATGL*WVEVLD
Trigger: ATCCAGAACTTCTACCCAGCATAGCCCCGTCGCAGA...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCCCGAGATCGCACCACTaGACTCCAGCCTCGGTGACA +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLPRSHH*TPASVT
Trigger: TGTCACCGAGGCTGGAGTGCAGTGGTGCGATCTCGG...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS-3UTR CCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCCTTTGCTGCTGTATATaGAGCCCAGAGAGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPLCCCI*SPERSG
Trigger: TCCACTCCTCTCTGGGCTCCATATACAGCAGCAAAG...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGGCCTTCTTCCACCCTTaGTTTGCAGTCATTGTGCCC +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRAFFHP*FAVIVP
Trigger: GGGCACAATGACTGCAAACCAAGGGTGGAAGAAGGC...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCTGGGTTATTTTGAGGTaGCCTTGGTCCCATCTGCTG +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPWVILR*PWSHLL
Trigger: CAGCAGATGGGACCAAGGCCACCTCAAAATAACCCA...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCTGTGGCCCCTGGTTTaGTGGTTGCTGCTGCATCAC +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFLWPLV*WLLLHH
Trigger: GTGATGCAGCAGCAACCACCAAACCAGGGGCCACAG...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCGGGCTGCATCATATTTaGCGGCCCGTGGGACACCTG +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLGLHHI*RPVGHL
Trigger: CAGGTGTCCCACGGGCCGCCAAATATGATGCAGCCC...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTGGACCATCTGGCCCTaGGAGGGCACGATTTGCTGG +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLWTIWP*EGTICW
Trigger: CCAGCAAATCGTGCCCTCCCAGGGCCAGATGGTCCA...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGATTTGTGGGCCCTGCTaGGAAAGCATCTGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRICGPC*ESICLG
Trigger: ACCCAAGCAGATGCTTTCCCAGCAGGGCCCACAAAT...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCAATTTGTGGGCCCTGCTaGGAAAGCATCTGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAICGPC*ESICLG
Trigger: ACCCAAGCAGATGCTTTCCCAGCAGGGCCCACAAAT...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTGGTCCCCTCATTATCTaGGCTGGTCCCGGCATGACA +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLGPLII*AGPGMT
Trigger: TGTCATGCCGGGACCAGCCCAGATAATGAGGGGACC...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTTCACAGGCCCTTGCTaGGGCAGCATCTGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLFTGPC*GSICPD
Trigger: GTCAGGACAGATGCTGCCCCAGCAAGGGCCTGTGAA...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCAGCCCATAACCTGAGATaGACTGTTGTTCACAGGCCC +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAAHNLR*TVVHRP
Trigger: GGGCCTGTGAACAACAGTCCATCTCAGGTTATGGGC...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTCTGCTGCTGAGACTGTaGCTGACTGGGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTLLLRL*LTGRWW
Trigger: CCACCACCTCCCAGTCAGCCACAGTCTCAGCAGCAG...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCCTGCTGCTGAGACTGTaGCTGACTGGGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLLLLRL*LTGRWW
Trigger: CCACCACCTCCCAGTCAGCCACAGTCTCAGCAGCAG...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGGTTGTTTGGGCCTCCTaGGACAGATGGTGCTTCACT +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRVVWAS*DRWCFT
Trigger: AGTGAAGCACCATCTGTCCCAGGAGGCCCAAACAAC...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGGGTGGCCGTGAGAGCTaGGCAGGGAATTTACAGGGG +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQGGRES*AGNLQG
Trigger: CCCCTGTAAATTCCCTGCCCAGCTCTCACGGCCACC...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTGGCGCAGCCACATTTaGGAAGTGGTGGCCGTGAGA +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLWRSHI*EVVAVR
Trigger: TCTCACGGCCACCACTTCCCAAATGTGGCTGCGCCA...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGTTGGGCCTAGATGTCTaGGTTGGCGCAGCCACATTT +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRLGLDV*VGAATF
Trigger: AAATGTGGCTGCGCCAACCCAGACATCTAGGCCCAA...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCTGAAGGTTCTGTGCTaGGAGGGCGGTTGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFLKVLC*EGGCWV
Trigger: CACCCAACAACCGCCCTCCCAGCACAGAACCTTCAG...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCGCATCAGGCCAGAGTTaGTTGTCAGTGGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFASGQS*LSVGLQ
Trigger: CTGCAGCCCCACTGACAACCAACTCTGGCCTGATGC...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGGGGTGCTGGGGGCGTTaGGGTTTTACTGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQGCWGR*GFTVQL
Trigger: GAGCTGGACAGTAAAACCCCAACGCCCCCAGCACCC...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTACACCGCCAGGTAAGCTaGGTCCTGCTGAGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLHRQVS*VLLRQC
Trigger: GCACTGCCTCAGCAGGACCCAGCTTACCTGGCGGTG...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCGAGCGTACACTGGTaGGGAGAGCACCGCCAGGTA +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTSSVHW*GEHRQV
Trigger: TACCTGGCGGTGCTCTCCCCACCAGTGTACGCTCGA...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTGCGACGGGGCTATGCTaGGTAGAAGTTCTGGATGGG +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLATGLC*VEVLDG
Trigger: CCCATCCAGAACTTCTACCCAGCATAGCCCCGTCGC...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCAATTTACCTCCAGCTCTaGTCTGGCAACAGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAIYLQL*SGNRGL
Trigger: CAGGCCTCTGTTGCCAGACCAGAGCTGGAGGTAAAT...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACGCCTGTGGTCTCAACTaGCATGGGAGGTGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHACGLN*HGRWEG
Trigger: ACCCTCCCACCTCCCATGCCAGTTGAGACCACAGGC...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS-3UTR TCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACTGCTGGTTGTTGCTCTaGGCAAGGATCCGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHCWLLL*ARIRSR
Trigger: GCGGCTACGGATCCTTGCTCAGAGCAACAACCAGCA...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCATTGCATCTGACTaGGAAGCAGGGCGAGGAGTC +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLSIASD*EAGRGV
Trigger: GACTCCTCGCCCTGCTTCTCAGTCAGATGCAATGGA...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCTGTGGCTGTTGCTGCTaGTGTTGCTGTGGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFCGCCC*CCCGGL
Trigger: AAGACCCCCACAGCAACATCAGCAGCAACAGCCACA...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCATGCAAACTCTTCATCTaGGGAGCTGTGAACTGGCCT +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTACKLFI*GAVNWP
Trigger: AGGCCAGTTCACAGCTCCTCAGATGAAGAGTTTGCA...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTCAGGAGACTTGTTGGTaGGGTGGGGCTGCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCQETCW*GGAAAR
Trigger: CCTTGCAGCAGCCCCACCTCACCAACAAGTCTCCTG...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCATTGTTCATGTTGCCATaGATTCCCATGAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTALFMLP*IPMRLG
Trigger: GCCCAGCCTCATGGGAATTCATGGCAACATGAACAA...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGTTGCTGAGGTTCACTTaGGGAACCCCAGAAGTACCA +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRLLRFT*GTPEVP
Trigger: TGGTACTTCTGGGGTTCCTCAAGTGAACCTCAGCAA...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCGGGCAGCATCTGTCCTaGCATCTGTCCCGTAAACTG +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFGQHLS*HLSRKL
Trigger: CAGTTTACGGGACAGATGTCAGGACAGATGCTGCCC...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCAGAGCTAACAGGTCTTaGCATTACTGGAGGGATGCT +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPRANRS*HYWRDA
Trigger: AGCATCCCTCCAGTAATGTCAAGACCTGTTAGCTCT...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTGGCCGGGCATTAGACTaGGCAGCTGACTGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCGRALD*AADCPS
Trigger: TGAGGGACAGTCAGCTGCTCAGTCTAATGCCCGGCC...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAACAGGGGTGGCTCGTaGGCTAAGGACCAAAGGTCG +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHNRGGS*AKDQRS
Trigger: CGACCTTTGGTCCTTAGCTCACGAGCCACCCCTGTT...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTGCTGAGGTGTTCACCTaGGGGCTAGCCTCATCTGGA +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTAEVFT*GLASSG
Trigger: TCCAGATGAGGCTAGCCCTCAGGTGAACACCTCAGC...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGGCTGAGGTGTTCACCTaGGGGCTAGCCTCATCTGGA +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQAEVFT*GLASSG
Trigger: TCCAGATGAGGCTAGCCCTCAGGTGAACACCTCAGC...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTAAGGTTGAGGCTGCAGTaGGCCGAGATCGCACCACTG +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLRLRLQ*AEIAPL
Trigger: CAGTGGTGCGATCTCGGCTCACTGCAGCCTCAACCT...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS-3UTR GCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGGAAGCTGCTGGTTGTTaGTCTGAGCAAGGATCCGTA +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIREAAGC*SEQGSV
Trigger: TACGGATCCTTGCTCAGAGCAACAACCAGCAGCTTC...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGTGTTGCTGCTGCTGCTaGAGCTGGGGAAAATTAGCT +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRCCCCC*SWGKLA
Trigger: AGCTAATTTTCCCCAGCTGCAGCAGCAGCAGCAACA...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCTGTTGTTGCTGCTGCTaGTGCAGCTGGGGAAAATTA +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPCCCCC*CSWGKL
Trigger: TAATTTTCCCCAGCTGCAGCAGCAGCAGCAACAACA...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGTGTTGTTGTTGCTGCTaGTGCTGCAGCTGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRCCCCC*CCSWGK
Trigger: TTTTCCCCAGCTGCAGCAGCAGCAGCAACAACAACA...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTGATGCAGGGGATCCCTaGTGGAAGGAGGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCDAGDP*WKEEGE
Trigger: CTCACCCTCCTCCTTCCAGCAGGGATCCCCTGCATC...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTAGATGCAGGGGATCCCTaGTGGAAGGAGGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLDAGDP*WKEEGE
Trigger: CTCACCCTCCTCCTTCCAGCAGGGATCCCCTGCATC...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCATTCCCAGGGGTGGTTaGTGTGGTCGAAGGCACCTG +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLIPRGG*CGRRHL
Trigger: CAGGTGCCTTCGACCACAGCAACCACCCCTGGGAAT...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCAATCATTTGTGGGCCCTaGTGGGAAAGCATCTGCTTG +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAIICGP*WESICL
Trigger: CAAGCAGATGCTTTCCCAGCAGGGCCCACAAATGAT...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTGCAGGATCACCATGCTaGTGGGCCATGTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCAGSPC*WAMCGL
Trigger: CAGCCCACACATGGCCCAGCAGCATGGTGATCCTGC...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTGTAGCAGGATCACCATaGTGCTGGGCCATGTGTGGG +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTVAGSP*CWAMCG
Trigger: CCCACACATGGCCCAGCAGCATGGTGATCCTGCTAC...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCGGTTGTCAGTGGGGCTaGAGGAATTGTGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFGCQWG*RNCAWL
Trigger: CAGCCAAGCACAATTCCTGCAGCCCCACTGACAACC...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCTTTGAGACTAAATTCTaGGACGGGGCTATGCTGGGT +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPFETKF*DGAMLG
Trigger: ACCCAGCATAGCCCCGTCGCAGAATTTAGTCTCAAA...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAGCACTTTGTGGACTaGTTGAGCTCAGGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAQHFVD*LSSGVP
Trigger: TGGAACTCCTGAGCTCAAGCAGTCCACAAAGTGCTG...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS-3UTR CCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTGCTGCAGCTCTGGATTaGGGCCTGGTGCCATCATGG +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCAAALD*GLVPSW
Trigger: CCATGATGGCACCAGGCCCCAATCCAGAGCTGCAGC...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGCTTTGCTGCTGTATATaGAGCCCAGAGAGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRLCCCI*SPERSG
Trigger: TCCACTCCTCTCTGGGCTCCATATACAGCAGCAAAG...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCAACAGGCACCTGAGTTaGGGCAGTAAACTGGGGTCG +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFNRHLS*GSKLGS
Trigger: CGACCCCAGTTTACTGCCCCAACTCAGGTGCCTGTT...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTCAGCTGGTTCCAGCCTaGAGGAACAGGCACCTGAGT +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTQLVPA*RNRHLS
Trigger: ACTCAGGTGCCTGTTCCTCCAGGCTGGAACCAGCTG...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCCAGCTGGTTCCAGCCTaGAGGAACAGGCACCTGAGT +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLQLVPA*RNRHLS
Trigger: ACTCAGGTGCCTGTTCCTCCAGGCTGGAACCAGCTG...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCGAGTTGCTGTTGCATTaGGCCGGGCAAGGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLELLLH*AGQGSL
Trigger: AAGGCTCCCTTGCCCGGCCCAATGCAACAGCAACTC...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACGAGTTGCTGTTGCATTaGGCCGGGCAAGGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHELLLH*AGQGSL
Trigger: AAGGCTCCCTTGCCCGGCCCAATGCAACAGCAACTC...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCAAGCTGTGAACTGGCCTaGGTTGCTCATCTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTASCELA*VAHLRK
Trigger: TTTCCTCAGATGAGCAACCCAGGCCAGTTCACAGCT...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCAATTTTGAGGTGGCCTTaGTCCCATCTGCTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAILRWP*SHLLLS
Trigger: ACTCAGCAGCAGATGGGACCAAGGCCACCTCAAAAT...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGATTTTGAGGTGGCCTTaGTCCCATCTGCTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRILRWP*SHLLLS
Trigger: ACTCAGCAGCAGATGGGACCAAGGCCACCTCAAAAT...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCTGGCCCCTGGTTTGGTaGTTGCTGCTGCATCACCAT +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFWPLVW*LLLHHH
Trigger: ATGGTGATGCAGCAGCAACCACCAAACCAGGGGCCA...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCTGAATTCCCAGGGGTaGTTGCTGTGGTCGAAGGCA +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFLNSQG*LLWSKA
Trigger: TGCCTTCGACCACAGCAACCACCCCTGGGAATTCAG...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTGTTGCTGGACCATCTaGCCCTGGGAGGGCACGATT +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLCCWTI*PWEGTI
Trigger: AATCGTGCCCTCCCAGGGCCAGATGGTCCAGCAACA...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACTGTTGCTGGACCATCTaGCCCTGGGAGGGCACGATT +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHCCWTI*PWEGTI
Trigger: AATCGTGCCCTCCCAGGGCCAGATGGTCCAGCAACA...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACCCTGTGGCATAAGCTaGGCCCTTGAAAGGATCATA +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAPCGIS*ALERII
Trigger: TATGATCCTTTCAAGGGCCCAGCTTATGCCACAGGG...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACGGTGGGGTCATCCTTTaGGGCGAGGGCCCAAGATTT +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHGGVIL*GEGPRF
Trigger: AAATCTTGGGCCCTCGCCCCAAAGGATGACCCCACC...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCGGGAAAGCATCTGCTTaGGTGGGGTCATCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFGKASA*VGSSFG
Trigger: CCCAAAGGATGACCCCACCCAAGCAGATGCTTTCCC...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTGGCGCCATCATTTGTaGGCCCTGCTGGGAAAGCAT +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLWRHHL*ALLGKH
Trigger: ATGCTTTCCCAGCAGGGCCCACAAATGATGGCGCCA...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTGGTCCCCTCATTATCTaGGCTGGTCCCGGCATGACA +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTGPLII*AGPGMT
Trigger: TGTCATGCCGGGACCAGCCCAGATAATGAGGGGACC...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTTCTCCAGGCAACGGTaGCTGATCAGCCTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLFSRQR*LISLFQ
Trigger: CTGGAAGAGGCTGATCAGCCACCGTTGCCTGGAGAA...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCTTCTCCAGGCAACGGTaGCTGATCAGCCTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFFSRQR*LISLFQ
Trigger: CTGGAAGAGGCTGATCAGCCACCGTTGCCTGGAGAA...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACTGGCGCAGCCACATTTaGGAAGTGGTGGCCGTGAGA +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHWRSHI*EVVAVR
Trigger: TCTCACGGCCACCACTTCCCAAATGTGGCTGCGCCA...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGAGTTGGTTGTCAGTaGGGCTGCAGGAATTGTGCT +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRRVGCQ*GCRNCA
Trigger: AGCACAATTCCTGCAGCCCCACTGACAACCAACTCT...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCGCATCAGGCCAGAGTTaGTTGTCAGTGGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLASGQS*LSVGLQ
Trigger: CTGCAGCCCCACTGACAACCAACTCTGGCCTGATGC...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCTACTGTCCAGCTCTGTaGATAACTGCTCTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPYCPAL*ITALFP
Trigger: TGGGAACAGAGCAGTTATCCACAGAGCTGGACAGTA...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCTCATTTTTAGCAGAGTaGGTGCTGGGGGCGTTGGGG +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFSFLAE*VLGALG
Trigger: CCCCAACGCCCCCAGCACCCACTCTGCTAAAAATGA...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTACTATCGAGCGTACACTaGTGGGGAGAGCACCGCCAG +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLLSSVH*WGEHRQ
Trigger: CTGGCGGTGCTCTCCCCACCAGTGTACGCTCGATAG...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGAACTGGCATGGGAGGTaGGAGGGTTGCTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQNWHGR*EGCLSP
Trigger: TGGGCTCAAGCAACCCTCCCACCTCCCATGCCAGTT...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS-3UTR TCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTACTTCCCGGGGGATGTTaGATGTCACACGCACGCTGT +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLLPGGC*MSHARC
Trigger: ACAGCGTGCGTGTGACATTCAACATCCCCCGGGAAG...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTTGCTGGTTGTTGCTCTaGGCAAGGATCCGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCCWLLL*ARIRSR
Trigger: GCGGCTACGGATCCTTGCTCAGAGCAACAACCAGCA...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTATGCTGGTTGTTGCTCTaGGCAAGGATCCGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLCWLLL*ARIRSR
Trigger: GCGGCTACGGATCCTTGCTCAGAGCAACAACCAGCA...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACCGCCTCCATCCTAACTaGATTTCCAGCTCCCATGGG +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHRLHPN*ISSSHG
Trigger: CCCATGGGAGCTGGAAATTCAGTTAGGATGGAGGCG...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCCGCCTCCATCCTAACTaGATTTCCAGCTCCCATGGG +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLRLHPN*ISSSHG
Trigger: CCCATGGGAGCTGGAAATTCAGTTAGGATGGAGGCG...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACTGGATCCATTGCATCTaGCTGAGAAGCAGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHWIHCI*LRSRAR
Trigger: CCTCGCCCTGCTTCTCAGTCAGATGCAATGGATCCA...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCACAGGCTGCATTGGGTaGTGTGGGGGAGCTAAAGAT +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFTGCIG*CGGAKD
Trigger: ATCTTTAGCTCCCCCACATCACCCAATGCAGCCTGT...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTGTGGCTGTTGCTGCTaGTGTTGCTGTGGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQCGCCC*CCCGGL
Trigger: AAGACCCCCACAGCAACATCAGCAGCAACAGCCACA...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCGGTCCCATCTGCTGCTaGGTTTGGTTAACCGTTGGG +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLGPICC*VWLTVG
Trigger: CCCAACGGTTAACCAAACTCAGCAGCAGATGGGACC...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTGGTCCCATCTGCTGCTaGGTTTGGTTAACCGTTGGG +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTGPICC*VWLTVG
Trigger: CCCAACGGTTAACCAAACTCAGCAGCAGATGGGACC...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTGGAAGTGGGTTATTTTaGGGTGGCCTTGGTCCCATC +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLGSGLF*GGLGPI
Trigger: GATGGGACCAAGGCCACCTCAAAATAACCCACTTCC...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCGGCACATTTCCCTGTTaGACCATAGGATTCCGACCC +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFGTFPC*TIGFRP
Trigger: GGGTCGGAATCCTATGGTTCAACAGGGAAATGTGCC...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCCAGCTGAGGGGCTCCTaGATTCCCAGGGGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVQLRGS*IPRGGC
Trigger: GCAACCACCCCTGGGAATTCAGGAGCCCCTCAGCTG...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTGGCCTTGCATGTTGCTaGGGTTCACTTGAGGAACCC +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTGLACC*GSLEEP
Trigger: GGGTTCCTCAAGTGAACCTCAGCAACATGCAAGGCC...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACGGCCTTGCATGTTGCTaGGGTTCACTTGAGGAACCC +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHGLACC*GSLEEP
Trigger: GGGTTCCTCAAGTGAACCTCAGCAACATGCAAGGCC...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACGGGCAGCATCTGTCCTaGCATCTGTCCCGTAAACTG +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHGQHLS*HLSRKL
Trigger: CAGTTTACGGGACAGATGTCAGGACAGATGCTGCCC...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTGGGCAGCATCTGTCCTaGCATCTGTCCCGTAAACTG +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTGQHLS*HLSRKL
Trigger: CAGTTTACGGGACAGATGTCAGGACAGATGCTGCCC...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCCACTCTGCAATAAGTTaGCCAACAATGGGCTCGTTA +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPHSAIS*PTMGSL
Trigger: TAACGAGCCCATTGTTGGTCAACTTATTGCAGAGTG...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTTGCACCTTGAGTTGCTaGAAGGGGCGATGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCCTLSC*KGRWSR
Trigger: CCTGGACCATCGCCCCTTTCAGCAACTCAAGGTGCA...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTGGGGAGTTGCACCTTaGGTTGCTGAAAGGGGCGAT +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTWGVAP*VAERGD
Trigger: ATCGCCCCTTTCAGCAACTCAAGGTGCAACTCCCCA...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGATTAGACTGAGCAGCTaGCTGTCCCTCAGAAACCAT +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRIRLSS*LSLRNH
Trigger: ATGGTTTCTGAGGGACAGTCAGCTGCTCAGTCTAAT...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTGAGGTTACAATGAGCTaGGATGGCACGACTGCACTC +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLEVTMS*DGTTAL
Trigger: GAGTGCAGTCGTGCCATCTCAGCTCATTGTAACCTC...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS-3UTR TCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTGACGGGTGGATCACTTaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTDGWIT*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAAGTGATCCACCCGTC...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS-3UTR GCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCTTGCTGTGGGGGTCTTaGCTGCAACTGTTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFLLWGS*LQLLLL
Trigger: CAGCAACAACAGTTGCAGGCAAGACCCCCACAGCAA...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTGGGCTTGTGAGGCTTaGTGGCTGCCAAAGGGATAT +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLWACEA*WLPKGY
Trigger: ATATCCCTTTGGCAGCCAGCAAGCCTCACAAGCCCA...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTATTCCCAGGGGTGGTTaGTGTGGTCGAAGGCACCTG +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCIPRGG*CGRRHL
Trigger: CAGGTGCCTTCGACCACAGCAACCACCCCTGGGAAT...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCGATTTGCTGGTGCATaGCCATCAGCTGAGATGGTG +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFRFAGA*PSAEMV
Trigger: CACCATCTCAGCTGATGGGCATGCACCAGCAAATCG...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTATGGGAGGGCACGATTTaGTGGTGCATGCCCATCAGC +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLWEGTI*WCMPIS
Trigger: GCTGATGGGCATGCACCAGCAAATCGTGCCCTCCCA...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTTCAAGGTTCCTTGTTaGTGGACCATCTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLFKVPC*WTIWPW
Trigger: CCAGGGCCAGATGGTCCAGCAACAAGGAACCTTGAA...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCTGCTGGGAAAGCATCTaGTTGGGTGGGGTCATCCTT +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFCWESI*LGGVIL
Trigger: AAGGATGACCCCACCCAAGCAGATGCTTTCCCAGCA...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTTGTTCACAGGCCCTTaGTGGGGCAGCATCTGTCCT +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTLFTGP*WGSICP
Trigger: AGGACAGATGCTGCCCCAGCAAGGGCCTGTGAACAA...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTAAGTTGTGGCTGTGGCTaGTGCTGTGGTGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLSCGCG*CCGGCG
Trigger: ACCACAGCCACCACAGCAGCAGCCACAGCCACAACT...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTACGGAGGCAGGTCCTTaGAGACTGACCATGACAGGC +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCTEAGP*RLTMTG
Trigger: GCCTGTCATGGTCAGTCTGCAAGGACCTGCCTCCGT...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTTTCTGAAGGTTCTGTaGTGGGAGGGCGGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLFLKVL*WEGGCW
Trigger: CCAACAACCGCCCTCCCAGCACAGAACCTTCAGAAA...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCAGGCAACTCCACATTCTaGAATAGGGCTGCATTTGTC +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAGNSTF*NRAAFV
Trigger: GACAAATGCAGCCCTATTGCAGAATGTGGAGTTGCC...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGTCACTCAATTCGGGATaGACAAGGGATGAACACAGC +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRSLNSG*TRDEHS
Trigger: GCTGTGTTCATCCCTTGTGCATCCCGAATTGAGTGA...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCGGTTGTCAGTGGGGCTaGAGGAATTGTGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLGCQWG*RNCAWL
Trigger: CAGCCAAGCACAATTCCTGCAGCCCCACTGACAACC...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCTTTCTTCGCTTGGATTaGACCGCACTGGTTATGTCT +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPFLRLD*TALVMS
Trigger: AGACATAACCAGTGCGGTGCAATCCAAGCGAAGAAA...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTTTGAGACTAAATTCTaGGACGGGGCTGGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTFETKF*DGAGGR
Trigger: CCGGCCACCAGCCCCGTCGCAGAATTTAGTCTCAAA...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000612493.4
CDS-3UTR CCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACCTGCTGATGTTGCTGTaGGGGTCTTGCCTGCAACTG +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHLLMLL*GSCLQL
Trigger: CAGTTGCAGGCAAGACCCCCACAGCAACATCAGCAG...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCCTGCTGATGTTGCTGTaGGGGTCTTGCCTGCAACTG +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLLLMLL*GSCLQL
Trigger: CAGTTGCAGGCAAGACCCCCACAGCAACATCAGCAG...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTGTTGGGGCAGTAAACTaGGGTCGAATTCCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTVGAVN*GRIPCG
Trigger: GCCACAGGGAATTCGACCCCAGTTTACTGCCCCAAC...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCGCCTTCTTCCACCCTTaGTTTGCAGTCATTGTGCCC +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFAFFHP*FAVIVP
Trigger: GGGCACAATGACTGCAAACCAAGGGTGGAAGAAGGC...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTGCCTTCTTCCACCCTTaGTTTGCAGTCATTGTGCCC +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLAFFHP*FAVIVP
Trigger: GGGCACAATGACTGCAAACCAAGGGTGGAAGAAGGC...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTGAGTTGCTGTTGCATTaGGCCGGGCAAGGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCELLLH*AGQGSL
Trigger: AAGGCTCCCTTGCCCGGCCCAATGCAACAGCAACTC...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCAGTTTGGTTAACCGTTaGGGAGGATGCAGGGGATCC +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFSLVNR*GGCRGS
Trigger: GGATCCCCTGCATCCTCCCCAACGGTTAACCAAACT...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTACTGTGGCCCCTGGTTTaGTGGTTGCTGCTGCATCAC +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLLWPLV*WLLLHH
Trigger: GTGATGCAGCAGCAACCACCAAACCAGGGGCCACAG...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAAACTCTGTGGCCCCTaGTTTGGTGGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHKLCGP*FGGCCC
Trigger: GCAGCAGCAACCACCAAACCAGGGGCCACAGAGTTT...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTAAACTCTGTGGCCCCTaGTTTGGTGGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTKLCGP*FGGCCC
Trigger: GCAGCAGCAACCACCAAACCAGGGGCCACAGAGTTT...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCGATGGTGGGCCCTGCTaGGGCTGGCCTTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVDGGPC*GWPCML
Trigger: CAACATGCAAGGCCAGCCCCAGCAGGGCCCACCATC...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACGGGTTCACCATCATCTaGCCCTGTGGCATAAGCTGG +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHGFTII*PCGISW
Trigger: CCAGCTTATGCCACAGGGCCAGATGATGGTGAACCC...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTGGGTTCACCATCATCTaGCCCTGTGGCATAAGCTGG +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTGFTII*PCGISW
Trigger: CCAGCTTATGCCACAGGGCCAGATGATGGTGAACCC...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTGGTGGGGTCATCCTTTaGGGCGAGGGCCCAAGATTT +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCGGVIL*GEGPRF
Trigger: AAATCTTGGGCCCTCGCCCCAAAGGATGACCCCACC...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTGGGAAAGCATCTGCTTaGGTGGGGTCATCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTGKASA*VGSSFG
Trigger: CCCAAAGGATGACCCCACCCAAGCAGATGCTTTCCC...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTATTTGTGGGCCCTGCTaGGAAAGCATCTGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLICGPC*ESICLG
Trigger: ACCCAAGCAGATGCTTTCCCAGCAGGGCCCACAAAT...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTGGCGCCATCATTTGTaGGCCCTGCTGGGAAAGCAT +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLWRHHL*ALLGKH
Trigger: ATGCTTTCCCAGCAGGGCCCACAAATGATGGCGCCA...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTGGCGCCATCATTTGTaGGCCCTGCTGGGAAAGCAT +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTWRHHL*ALLGKH
Trigger: ATGCTTTCCCAGCAGGGCCCACAAATGATGGCGCCA...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTAGGTCCCCTCATTATCTaGGCTGGTCCCGGCATGACA +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLGPLII*AGPGMT
Trigger: TGTCATGCCGGGACCAGCCCAGATAATGAGGGGACC...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTATTCACAGGCCCTTGCTaGGGCAGCATCTGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLFTGPC*GSICPD
Trigger: GTCAGGACAGATGCTGCCCCAGCAAGGGCCTGTGAA...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTTTCACAGGCCCTTGCTaGGGCAGCATCTGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCFTGPC*GSICPD
Trigger: GTCAGGACAGATGCTGCCCCAGCAAGGGCCTGTGAA...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTTCTCCAGGCAACGGTaGCTGATCAGCCTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTFSRQR*LISLFQ
Trigger: CTGGAAGAGGCTGATCAGCCACCGTTGCCTGGAGAA...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGTGGCCTCTGTTCAACTaGTTGAGAAGGATAACCTGG +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRWPLFN*LRRITW
Trigger: CCAGGTTATCCTTCTCAACCAGTTGAACAGAGGCCA...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCCTGACTGGGAGGTGGTaGCTGCTGCTGCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVLTGRW*LLLLRQ
Trigger: CTGCCTCAGCAGCAGCAGCCACCACCTCCCAGTCAG...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTGCCACTCTGTTGCATaGGCATTCTCTGGGAGTCGG +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTCHSVA*AFSGSR
Trigger: CCGACTCCCAGAGAATGCCCATGCAACAGAGTGGCA...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTGCCTCCTGGGACAGATaGTGCTTCACTGCCACTTGC +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCASWDR*CFTATC
Trigger: GCAAGTGGCAGTGAAGCACCATCTGTCCCAGGAGGC...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCCTAGATGTCTGGGTTaGCGCAGCCACATTTGGGAA +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFPRCLG*RSHIWE
Trigger: TTCCCAAATGTGGCTGCGCCAACCCAGACATCTAGG...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCGGGGCTGGCTCTGTTTaGTGTTTTGGGCCTAGATGT +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFGAGSV*CFGPRC
Trigger: ACATCTAGGCCCAAAACACCAAACAGAGCCAGCCCC...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCGAGGATAATAGGGTCTaGGGCTGGCTCTGTTTGGTG +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFEDNRV*GWLCLV
Trigger: CACCAAACAGAGCCAGCCCCAGACCCTATTATCCTC...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTGGGAGGGCGGTTGTTaGGTGTCTGAGGATAATAGG +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLWEGGC*VSEDNR
Trigger: CCTATTATCCTCAGACACCCAACAACCGCCCTCCCA...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCCTGCGACTGTTGCTTaGACTTGCCCGTTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFPATVA*TCPFCC
Trigger: GCAACAAAACGGGCAAGTCCAAGCAACAGTCGCAGG...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTCTTACTAGACGAGACTaGGCTTCGCCGGTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTLTRRD*ASPVAR
Trigger: TCTGGCAACCGGCGAAGCCCAGTCTCGTCTAGTAAG...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTCGGAGGGTACCAGAGTaGTTACTATCGAGCGTACAC +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLRRVPE*LLSSVH
Trigger: GTGTACGCTCGATAGTAACCACTCTGGTACCCTCCG...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCGGTAGAAGTTCTGGATaGGATCCCACCTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFGRSSG*DPTFSS
Trigger: GGAGGAGAAGGTGGGATCCCATCCAGAACTTCTACC...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCTGGATTTTCTTCGCTTaGATTGCACCGCACTGGTTA +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPWIFFA*IAPHWL
Trigger: TAACCAGTGCGGTGCAATCCAAGCGAAGAAAATCCA...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACTGGTCTCAACTGGCATaGGAGGTGGGAGGGTTGCTT +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHWSQLA*EVGGLL
Trigger: AAGCAACCCTCCCACCTCCCATGCCAGTTGAGACCA...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS-3UTR TCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTTCCATTGCATCTGACTaGGAAGCAGGGCGAGGAGTC +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCSIASD*EAGRGV
Trigger: GACTCCTCGCCCTGCTTCTCAGTCAGATGCAATGGA...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAAAGATCCTGAGGGATaGCTTTGCTGCTGTATATGG +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRKDPEG*LCCCIW
Trigger: CCATATACAGCAGCAAAGTCATCCCTCAGGATCTTT...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTCCTGGGTTGCTCATCTaGGGAAAGTTTGTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTPGLLI*GKFVWA
Trigger: AGCCCACACAAACTTTCCTCAGATGAGCAACCCAGG...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCTGCAAACTCTTCATCTaGGGAGCTGTGAACTGGCCT +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFCKLFI*GAVNWP
Trigger: AGGCCAGTTCACAGCTCCTCAGATGAAGAGTTTGCA...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGGGAAGTGGGTTATTTTaGGGTGGCCTTGGTCCCATC +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQGSGLF*GGLGPI
Trigger: GATGGGACCAAGGCCACCTCAAAATAACCCACTTCC...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCGGAAGTGGGTTATTTTaGGGTGGCCTTGGTCCCATC +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLGSGLF*GGLGPI
Trigger: GATGGGACCAAGGCCACCTCAAAATAACCCACTTCC...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCGGCACATTTCCCTGTTaGACCATAGGATTCCGACCC +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLGTFPC*TIGFRP
Trigger: GGGTCGGAATCCTATGGTTCAACAGGGAAATGTGCC...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTGGCACATTTCCCTGTTaGACCATAGGATTCCGACCC +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTGTFPC*TIGFRP
Trigger: GGGTCGGAATCCTATGGTTCAACAGGGAAATGTGCC...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCTTGTTCATGTTGCCATaGATTCCCATGAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFLFMLP*IPMRLG
Trigger: GCCCAGCCTCATGGGAATTCATGGCAACATGAACAA...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCATAAGCTGGGCCCTTaGAAGGATCATAGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFHKLGP*KDHRVL
Trigger: CAGAACCCTATGATCCTTTCAAGGGCCCAGCTTATG...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGCACTCTGCAATAAGTTaGCCAACAATGGGCTCGTTA +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRHSAIS*PTMGSL
Trigger: TAACGAGCCCATTGTTGGTCAACTTATTGCAGAGTG...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCCCAGGCAACGGTGGCTaGTCAGCCTCTTCCAGACCA +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVPGNGG*SASSRP
Trigger: TGGTCTGGAAGAGGCTGATCAGCCACCGTTGCCTGG...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTACCTGGTGGCCGGTTTaGAAATTCTGGCAGTTTAGG +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLTWWPV*KFWQFR
Trigger: CCTAAACTGCCAGAATTTTCAAACCGGCCACCAGGT...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTCTTTGTTTATCAGGTaGTGGTGGCACGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQSLFIR*WWHGGR
Trigger: CCTGCCTCCGTGCCACCATCACCTGATAAACAAAGA...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCACTTGCTTCAGGGAGTaGGGCCATCTCCGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVTCFRE*GHLRQW
Trigger: CCACTGGCGGAGATGGCCTCACTCCCTGAAGCAAGT...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTTGGGGAGTTGCACCTTaGGTTGCTGAAAGGGGCGAT +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCWGVAP*VAERGD
Trigger: ATCGCCCCTTTCAGCAACTCAAGGTGCAACTCCCCA...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACTGGCAATCACTGTCCTaGGGCACATTCAAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHWQSLS*GTFKLS
Trigger: GGAGAGCTTGAATGTGCCTCAGGACAGTGATTGCCA...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTGGCAATCACTGTCCTaGGGCACATTCAAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQWQSLS*GTFKLS
Trigger: GGAGAGCTTGAATGTGCCTCAGGACAGTGATTGCCA...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGACGGAGGTTACAATaGGCTGAGATGGCACGACTG +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHRRRLQ*AEMARL
Trigger: CAGTCGTGCCATCTCAGCTCATTGTAACCTCCGTCT...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS-3UTR GCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCTGTTGTTGTTGCTGCTaGTGCTGCAGCTGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFCCCCC*CCSWGK
Trigger: TTTTCCCCAGCTGCAGCAGCAGCAGCAACAACAACA...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTGTTGTTGTTGTTGCTaGTGCTGCTGCAGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQCCCCC*CCCSWG
Trigger: TCCCCAGCTGCAGCAGCAGCAGCAACAACAACAACA...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACTGTTGTTGTTGTTGCTaGTGCTGCTGCAGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHCCCCC*CCCSWG
Trigger: TCCCCAGCTGCAGCAGCAGCAGCAACAACAACAACA...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTGCCTGCAACTGTTGTTaGTGCTGTTGCTGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLACNCC*CCCCCC
Trigger: GCAACAACAGCAACAGCAGCAACAACAGTTGCAGGC...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTGTGGGGGTCTTGCCTaGAACTGTTGTTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQCGGLA*NCCCCC
Trigger: ACAGCAGCAACAACAGTTGCAGGCAAGACCCCCACA...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACTTGCTGTGGGGGTCTTaGCTGCAACTGTTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHLLWGS*LQLLLL
Trigger: CAGCAACAACAGTTGCAGGCAAGACCCCCACAGCAA...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTTGCTGTGGGGGTCTTaGCTGCAACTGTTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTLLWGS*LQLLLL
Trigger: CAGCAACAACAGTTGCAGGCAAGACCCCCACAGCAA...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCTTCCACCCTTGGTTTaGAGTCATTGTGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFLPPLV*SHCAQR
Trigger: TCTCTGGGCACAATGACTGCAAACCAAGGGTGGAAG...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTCTTCCACCCTTGGTTTaGAGTCATTGTGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLLPPLV*SHCAQR
Trigger: TCTCTGGGCACAATGACTGCAAACCAAGGGTGGAAG...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCGGTCTTGCCTGGAGTTaGTGTTGCATTGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVGLAWS*CCIGPG
Trigger: GCCCGGCCCAATGCAACAGCAACTCCAGGCAAGACC...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTGGGCTTGTGAGGCTTaGTGGCTGCCAAAGGGATAT +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLWACEA*WLPKGY
Trigger: ATATCCCTTTGGCAGCCAGCAAGCCTCACAAGCCCA...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCGTGAGGTGGGGCTGCTaGAAGGGAGTTGGGACCCTA +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVVRWGC*KGVGTL
Trigger: TAGGGTCCCAACTCCCTTGCAGCAGCCCCACCTCAC...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCTGGACATTTTGATTTaGTTGCAGCTGAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFLDILI*LQLRGS
Trigger: GGAGCCCCTCAGCTGCAAGCAAATCAAAATGTCCAG...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGCTCCTTGACCACCTaGATGCTGGACATTTTGATT +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRSSLTT*MLDILI
Trigger: AATCAAAATGTCCAGCATGCAGGTGGTCAAGGAGCT...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACTTCAAGGTTCCTTGTTaGTGGACCATCTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHFKVPC*WTIWPW
Trigger: CCAGGGCCAGATGGTCCAGCAACAAGGAACCTTGAA...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTTTGTTCACAGGCCCTTaGTGGGGCAGCATCTGTCCT +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCLFTGP*WGSICP
Trigger: AGGACAGATGCTGCCCCAGCAAGGGCCTGTGAACAA...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCGCAGGATCACCATGCTaGTGGGCCATGTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVAGSPC*WAMCGL
Trigger: CAGCCCACACATGGCCCAGCAGCATGGTGATCCTGC...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTCCTGGGACAGATGGTaGTTCACTGCCACTTGCTTC +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLSWDRW*FTATCF
Trigger: GAAGCAAGTGGCAGTGAAGCACCATCTGTCCCAGGA...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTTTCTGAAGGTTCTGTaGTGGGAGGGCGGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLFLKVL*WEGGCW
Trigger: CCAACAACCGCCCTCCCAGCACAGAACCTTCAGAAA...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCTGCGACGGGGCTATaGTGGGTAGAAGTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTSATGL*WVEVLD
Trigger: ATCCAGAACTTCTACCCAGCATAGCCCCGTCGCAGA...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGAGCAAAATGAGCCCCTaGTCTGTACCAGGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQSKMSP*SVPGAE
Trigger: CTCAGCACCTGGTACAGAGCAGGGGCTCATTTTGCT...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS-3UTR CCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCGGCCTGGTGCCATCATaGAAGATGACACATTTCCAC +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFGLVPS*KMTHFH
Trigger: GTGGAAATGTGTCATCTTCCATGATGGCACCAGGCC...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTGGCCTGGTGCCATCATaGAAGATGACACATTTCCAC +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLGLVPS*KMTHFH
Trigger: GTGGAAATGTGTCATCTTCCATGATGGCACCAGGCC...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCGCTGCAGCTCTGGATTaGGGCCTGGTGCCATCATGG +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVAAALD*GLVPSW
Trigger: CCATGATGGCACCAGGCCCCAATCCAGAGCTGCAGC...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACTGCTGCTGCTGCAGCTaGGGAAAATTAGCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHCCCCS*GKLAGF
Trigger: GAACCCAGCTAATTTTCCCCAGCTGCAGCAGCAGCA...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCGGGTCGAATTCCCTGTaGCTGTTGCTGCTGATGTTG +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLGSNSL*LLLLML
Trigger: CAACATCAGCAGCAACAGCCACAGGGAATTCGACCC...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTAGTTGGGGCAGTAAACTaGGGTCGAATTCCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLVGAVN*GRIPCG
Trigger: GCCACAGGGAATTCGACCCCAGTTTACTGCCCCAAC...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTAAACAGGCACCTGAGTTaGGGCAGTAAACTGGGGTCG +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLNRHLS*GSKLGS
Trigger: CGACCCCAGTTTACTGCCCCAACTCAGGTGCCTGTT...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCCAGAGAACCCTGGGCTaGAGGAGGTTGAAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVQRTLG*RRLKGS
Trigger: GGAGCCCTTCAACCTCCTCCAGCCCAGGGTTCTCTG...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTAAGGCGTCTGTACCGTaGCTAAGGATGGTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTKASVP*LRMVLP
Trigger: AGGCAAGACCATCCTTAGCCACGGTACAGACGCCTT...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCAAGGCGTCTGTACCGTaGCTAAGGATGGTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLKASVP*LRMVLP
Trigger: AGGCAAGACCATCCTTAGCCACGGTACAGACGCCTT...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCAGCTGTGAACTGGCCTaGGTTGCTCATCTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFSCELA*VAHLRK
Trigger: TTTCCTCAGATGAGCAACCCAGGCCAGTTCACAGCT...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGAGTTTGGTTAACCGTTaGGGAGGATGCAGGGGATCC +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQSLVNR*GGCRGS
Trigger: GGATCCCCTGCATCCTCCCCAACGGTTAACCAAACT...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTAAACTCTGTGGCCCCTaGTTTGGTGGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCKLCGP*FGGCCC
Trigger: GCAGCAGCAACCACCAAACCAGGGGCCACAGAGTTT...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCGGGCTGCATCATATTTaGCGGCCCGTGGGACACCTG +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVGLHHI*RPVGHL
Trigger: CAGGTGTCCCACGGGCCGCCAAATATGATGCAGCCC...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTAAGGTTCCTTGTTGCTaGACCATCTGGCCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCKVPCC*TIWPWE
Trigger: CTCCCAGGGCCAGATGGTCCAGCAACAAGGAACCTT...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCCCTGTGGCATAAGCTaGGCCCTTGAAAGGATCATA +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFPCGIS*ALERII
Trigger: TATGATCCTTTCAAGGGCCCAGCTTATGCCACAGGG...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTAAGCATCTGCTTGGGTaGGGTCATCCTTTGGGGCGA +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCKHLLG*GHPLGR
Trigger: TCGCCCCAAAGGATGACCCCACCCAAGCAGATGCTT...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTAGGGAAAGCATCTGCTTaGGTGGGGTCATCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLGKASA*VGSSFG
Trigger: CCCAAAGGATGACCCCACCCAAGCAGATGCTTTCCC...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTCCTCATTATCTGGGCTaGTCCCGGCATGACATTGGA +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTPHYLG*SRHDIG
Trigger: TCCAATGTCATGCCGGGACCAGCCCAGATAATGAGG...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGCCTCATTATCTGGGCTaGTCCCGGCATGACATTGGA +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQPHYLG*SRHDIG
Trigger: TCCAATGTCATGCCGGGACCAGCCCAGATAATGAGG...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGGCCCATAACCTGAGATaGACTGTTGTTCACAGGCCC +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQAHNLR*TVVHRP
Trigger: GGGCCTGTGAACAACAGTCCATCTCAGGTTATGGGC...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTGCCCATAACCTGAGATaGACTGTTGTTCACAGGCCC +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTAHNLR*TVVHRP
Trigger: GGGCCTGTGAACAACAGTCCATCTCAGGTTATGGGC...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTCCATGGCCTGAGAAGTaGTTTCCCGAGGCACTGTTT +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTPWPEK*FPEALF
Trigger: AAACAGTGCCTCGGGAAACCACTTCTCAGGCCATGG...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACCCATGGCCTGAGAAGTaGTTTCCCGAGGCACTGTTT +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHPWPEK*FPEALF
Trigger: AAACAGTGCCTCGGGAAACCACTTCTCAGGCCATGG...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTACTCTTCCAGACCAGCTaGGCGAGTATCTGGGGTGTT +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLLFQTS*ASIWGV
Trigger: AACACCCCAGATACTCGCCCAGCTGGTCTGGAAGAG...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACGTTGTTTGGGCCTCCTaGGACAGATGGTGCTTCACT +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHVVWAS*DRWCFT
Trigger: AGTGAAGCACCATCTGTCCCAGGAGGCCCAAACAAC...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACGGGGCTGGCTCTGTTTaGTGTTTTGGGCCTAGATGT +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHGAGSV*CFGPRC
Trigger: ACATCTAGGCCCAAAACACCAAACAGAGCCAGCCCC...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCGAGGATAATAGGGTCTaGGGCTGGCTCTGTTTGGTG +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLEDNRV*GWLCLV
Trigger: CACCAAACAGAGCCAGCCCCAGACCCTATTATCCTC...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTGGGAGGGCGGTTGTTaGGTGTCTGAGGATAATAGG +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTWEGGC*VSEDNR
Trigger: CCTATTATCCTCAGACACCCAACAACCGCCCTCCCA...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGCCTGCGACTGTTGCTTaGACTTGCCCGTTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQPATVA*TCPFCC
Trigger: GCAACAAAACGGGCAAGTCCAAGCAACAGTCGCAGG...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTTCCCAGGGCTTGGAGTaGTTTTCCTACTGGACCCAG +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCSQGLE*FSYWTQ
Trigger: CTGGGTCCAGTAGGAAAACCACTCCAAGCCCTGGGA...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTTGCCTCCCAGGGCTTaGAGTGGTTTTCCTACTGGA +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTLPPRA*SGFPTG
Trigger: TCCAGTAGGAAAACCACTCCAAGCCCTGGGAGGCAA...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTTGCCTCCCAGGGCTTaGAGTGGTTTTCCTACTGGA +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQLPPRA*SGFPTG
Trigger: TCCAGTAGGAAAACCACTCCAAGCCCTGGGAGGCAA...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTACCTGTCTGGATGTTTaGAGCAGGACTACTGGAGAG +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLTCLDV*SRTTGE
Trigger: CTCTCCAGTAGTCCTGCTCCAAACATCCAGACAGGT...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACGTTGCCAGAGGACCCTaGACTATTGGTCAAAAGGGG +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHVARGP*TIGQKG
Trigger: CCCCTTTTGACCAATAGTCCAGGGTCCTCTGGCAAC...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTTCATTTTTAGCAGAGTaGGTGCTGGGGGCGTTGGGG +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCSFLAE*VLGALG
Trigger: CCCCAACGCCCCCAGCACCCACTCTGCTAAAAATGA...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCATTTACCTCCAGCTCTaGTCTGGCAACAGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLIYLQL*SGNRGL
Trigger: CAGGCCTCTGTTGCCAGACCAGAGCTGGAGGTAAAT...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACATTTACCTCCAGCTCTaGTCTGGCAACAGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHIYLQL*SGNRGL
Trigger: CAGGCCTCTGTTGCCAGACCAGAGCTGGAGGTAAAT...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
3UTR CAA 72 bp CAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCATaGCACTTTATGAAACAGGTTGCAGGGACTAGGAAA +
Preference number: 4 (lower is better)
Translates to: QHQKGSTVLLSP*HFMKQVAGTRK
Trigger: TTTCCTAGTCCCTGCAACCTGTTTCATAAAGTGCAATGGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCCTTCCCCTTCAATCTaGACGGAGAGAATCCCTAAA +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFPSPSI*TERIPK
Trigger: TTTAGGGATTCTCTCCGTTCAGATTGAAGGGGAAGG...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTGCAAACTCTTCATCTaGGGAGCTGTGAACTGGCCT +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTCKLFI*GAVNWP
Trigger: AGGCCAGTTCACAGCTCCTCAGATGAAGAGTTTGCA...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTGTGGTCGAAGGCACCTaGCCTTGCATAAAGTTCGGA +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCVVEGT*PCIKFG
Trigger: TCCGAACTTTATGCAAGGTCAGGTGCCTTCGACCAC...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTGCCATGAATTCCCATaGGGCTGGGCTGCATCATAT +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTCHEFP*GWAASY
Trigger: ATATGATGCAGCCCAGCCTCATGGGAATTCATGGCA...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCAGGATCATAGGGTTCTaGGGGTTCAAGGTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFRIIGF*GFKVPC
Trigger: ACAAGGAACCTTGAACCCTCAGAACCCTATGATCCT...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGCATAAGCTGGGCCCTTaGAAGGATCATAGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQHKLGP*KDHRVL
Trigger: CAGAACCCTATGATCCTTTCAAGGGCCCAGCTTATG...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCAACCATGTTGGTTTGTTaGATGCTAACATCAGGCATC +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTATMLVC*MLTSGI
Trigger: GATGCCTGATGTTAGCATTCAACAAACCAACATGGT...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGACCATGTTGGTTTGTTaGATGCTAACATCAGGCATC +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRTMLVC*MLTSGI
Trigger: GATGCCTGATGTTAGCATTCAACAAACCAACATGGT...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACGACTGGAAGCCTAACTaGTTTGGGATCCTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHDWKPN*FGILLH
Trigger: ATGCAGCAGGATCCCAAATCAGTTAGGCTTCCAGTC...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACCTGTCATCATTAACTaGTTCTGGGGAAGTACTACA +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAPVIIN*FWGSTT
Trigger: TGTAGTACTTCCCCAGAATCAGTTAATGATGACAGG...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCTGCACCTTGAGTTGCTaGAAGGGGCGATGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVCTLSC*KGRWSR
Trigger: CCTGGACCATCGCCCCTTTCAGCAACTCAAGGTGCA...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCCTGCTATGGAGGCATTaGGTCTTTCTGGTGACAGAC +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLLLWRH*VFLVTD
Trigger: GTCTGTCACCAGAAAGACTCAATGCCTCCATAGCAG...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGGAGTTGTCAAGAAGTTaGCTTAACGATGTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRELSRS*LNDVGA
Trigger: AGCACCAACATCGTTAAGTCAACTTCTTGACAACTC...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACGGGATGCACAAGGGATaGACACAGCTCATTACTGTG +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHGMHKG*TQLITV
Trigger: CACAGTAATGAGCTGTGTTCATCCCTTGTGCATCCC...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCATTAGACTGAGCAGCTaGCTGTCCCTCAGAAACCAT +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFIRLSS*LSLRNH
Trigger: ATGGTTTCTGAGGGACAGTCAGCTGCTCAGTCTAAT...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCAATTGTGCTTGGCTGTaGTCCTTTCATAACCTGAAT +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPNCAWL*SFHNLN
Trigger: ATTCAGGTTATGAAAGGATCACAGCCAAGCACAATT...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCCGCCCTTATTATCAATaGGAATTCTCCCCTCATTTT +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPRPYYQ*EFSPHF
Trigger: AAAATGAGGGGAGAATTCTCATTGATAATAAGGGCG...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS-3UTR TCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCTGGCAAATTAGAGGTTaGACATCCAACACTCAAACA +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPWQIRG*TSNTQT
Trigger: TGTTTGAGTGTTGGATGTTCAACCTCTAATTTGCCA...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS-3UTR TCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCATGCTTAATAAGGACCTaGGACAGACTCCACCAAAAA +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTACLIRT*DRLHQK
Trigger: TTTTTGGTGGAGTCTGTCTCAGGTCCTTATTAAGCA...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS-3UTR GCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGGAAGCTGCTGGTTGTTaGTCTGAGCAAGGATCCGTA +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQEAAGC*SEQGSV
Trigger: TACGGATCCTTGCTCAGAGCAACAACCAGCAGCTTC...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGGCCTGCAACTGTTGTTaGTGCTGTTGCTGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQACNCC*CCCCCC
Trigger: GCAACAACAGCAACAGCAGCAACAACAGTTGCAGGC...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTGCCTGCAACTGTTGTTaGTGCTGTTGCTGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTACNCC*CCCCCC
Trigger: GCAACAACAGCAACAGCAGCAACAACAGTTGCAGGC...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCCTGGACATTTTGATTTaGTTGCAGCTGAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLLDILI*LQLRGS
Trigger: GGAGCCCCTCAGCTGCAAGCAAATCAAAATGTCCAG...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTCGATTTGCTGGTGCATaGCCATCAGCTGAGATGGTG +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCRFAGA*PSAEMV
Trigger: CACCATCTCAGCTGATGGGCATGCACCAGCAAATCG...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCTGGGAGGGCACGATTTaGTGGTGCATGCCCATCAGC +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVWEGTI*WCMPIS
Trigger: GCTGATGGGCATGCACCAGCAAATCGTGCCCTCCCA...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTATCATTTGTGGGCCCTaGTGGGAAAGCATCTGCTTG +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTIICGP*WESICL
Trigger: CAAGCAGATGCTTTCCCAGCAGGGCCCACAAATGAT...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCATCATTTGTGGGCCCTaGTGGGAAAGCATCTGCTTG +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLIICGP*WESICL
Trigger: CAAGCAGATGCTTTCCCAGCAGGGCCCACAAATGAT...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCAATCTGTCCCGTAAACTaGACCATATTTCCTTGCATG +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAICPVN*TIFPCM
Trigger: CATGCAAGGAAATATGGTGCAGTTTACGGGACAGAT...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCGTAGCAGGATCACCATaGTGCTGGGCCATGTGTGGG +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVVAGSP*CWAMCG
Trigger: CCCACACATGGCCCAGCAGCATGGTGATCCTGCTAC...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGACTGACATCGTTATTTaGTGTAGTAGCAGGATCACC +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRTDIVI*CSSRIT
Trigger: GGTGATCCTGCTACTACAGCAAATAACGATGTCAGT...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCTGGCTGTGGTGGGGGTaGCACATGCTGCATGAGTTG +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVWLWWG*HMLHEL
Trigger: CAACTCATGCAGCATGTGGCACCCCCACCACAGCCA...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCAGTTGTGGCTGTGGCTaGTGCTGTGGTGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVSCGCG*CCGGCG
Trigger: ACCACAGCCACCACAGCAGCAGCCACAGCCACAACT...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTCAGATGGTGCTTCACTaGCACTTGCTTCAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCQMVLH*HLLQGV
Trigger: CACTCCCTGAAGCAAGTGGCAGTGAAGCACCATCTG...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTATCCTGGGACAGATGGTaGTTCACTGCCACTTGCTTC +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLSWDRW*FTATCF
Trigger: GAAGCAAGTGGCAGTGAAGCACCATCTGTCCCAGGA...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTGGCAACTCCACATTCTaGAATAGGGCTGCATTTGTC +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLGNSTF*NRAAFV
Trigger: GACAAATGCAGCCCTATTGCAGAATGTGGAGTTGCC...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGAACAACACCCCCAACTaGAGCCACAGACACAGTAGA +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQNNTPN*SHRHSR
Trigger: TCTACTGTGTCTGTGGCTGCAGTTGGGGGTGTTGTT...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCAACAACACCCCCAACTaGAGCCACAGACACAGTAGA +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLNNTPN*SHRHSR
Trigger: TCTACTGTGTCTGTGGCTGCAGTTGGGGGTGTTGTT...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTGGAGGGATGCTTGGTaGAACGTTAGAACTGACCTC +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLWRDAW*NVRTDL
Trigger: GAGGTCAGTTCTAACGTTGCACCAAGCATCCCTCCA...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCGGGCTGCAGGAATTGTaGTTGGCTGTGATCCTTTCA +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLGLQEL*LAVILS
Trigger: TGAAAGGATCACAGCCAAGCACAATTCCTGCAGCCC...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTAGCTCTGTGGATAACTaGTCTGTTCCCATGAGCCCC +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCSSVDN*SVPMSP
Trigger: GGGGCTCATGGGAACAGAGCAGTTATCCACAGAGCT...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCTTTGAGACTAAATTCTaGGACGGGGCTATGCTGGGT +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFFETKF*DGAMLG
Trigger: ACCCAGCATAGCCCCGTCGCAGAATTTAGTCTCAAA...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACCCTGTACTCTAGGCTaGTTAGGAAATGTGAAAACT +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAPCTLG*LGNVKT
Trigger: AGTTTTCACATTTCCTAAGCAGCCTAGAGTACAGGG...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGGGCCTGGTGCCATCATaGAAGATGACACATTTCCAC +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQGLVPS*KMTHFH
Trigger: GTGGAAATGTGTCATCTTCCATGATGGCACCAGGCC...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACCTTTGCTGCTGTATATaGAGCCCAGAGAGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHLCCCI*SPERSG
Trigger: TCCACTCCTCTCTGGGCTCCATATACAGCAGCAAAG...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGCTGGGGAAAATTAGCTaGGTTCATTTGTCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRLGKIS*VHLSVH
Trigger: GTGAACAGACAAATGAACCCAGCTAATTTTCCCCAG...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTATGCTGCTGCTGCAGCTaGGGAAAATTAGCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLCCCCS*GKLAGF
Trigger: GAACCCAGCTAATTTTCCCCAGCTGCAGCAGCAGCA...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTGGGTCGAATTCCCTGTaGCTGTTGCTGCTGATGTTG +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCGSNSL*LLLLML
Trigger: CAACATCAGCAGCAACAGCCACAGGGAATTCGACCC...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCAGCTGTGAACTGGCCTaGGTTGCTCATCTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLSCELA*VAHLRK
Trigger: TTTCCTCAGATGAGCAACCCAGGCCAGTTCACAGCT...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTATTTTGAGGTGGCCTTaGTCCCATCTGCTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTILRWP*SHLLLS
Trigger: ACTCAGCAGCAGATGGGACCAAGGCCACCTCAAAAT...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTGGGTTATTTTGAGGTaGCCTTGGTCCCATCTGCTG +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTWVILR*PWSHLL
Trigger: CAGCAGATGGGACCAAGGCCACCTCAAAATAACCCA...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCCCCTGTGGCATAAGCTaGGCCCTTGAAAGGATCATA +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLPCGIS*ALERII
Trigger: TATGATCCTTTCAAGGGCCCAGCTTATGCCACAGGG...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTCATCATCTGGTTATGTaGCGCCATCATTTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTHHLVM*RHHLWA
Trigger: GGCCCACAAATGATGGCGCCACATAACCAGATGATG...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACCATCATCTGGTTATGTaGCGCCATCATTTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHHHLVM*RHHLWA
Trigger: GGCCCACAAATGATGGCGCCACATAACCAGATGATG...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTCCTCATTATCTGGGCTaGTCCCGGCATGACATTGGA +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCPHYLG*SRHDIG
Trigger: TCCAATGTCATGCCGGGACCAGCCCAGATAATGAGG...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCTTGCATGTTTGGAGTTaGTCCCCTCATTATCTGGGC +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFLHVWS*SPHYLG
Trigger: GCCCAGATAATGAGGGGACCAACTCCAAACATGCAA...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCTGGCCTCTGTTCAACTaGTTGAGAAGGATAACCTGG +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFWPLFN*LRRITW
Trigger: CCAGGTTATCCTTCTCAACCAGTTGAACAGAGGCCA...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTAGGCATCTGCTGAAGTaGCCTCTGTTCAACTGGTTG +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTRHLLK*PLFNWL
Trigger: CAACCAGTTGAACAGAGGCCACTTCAGCAGATGCCT...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTCCTAGATGTCTGGGTTaGCGCAGCCACATTTGGGAA +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCPRCLG*RSHIWE
Trigger: TTCCCAAATGTGGCTGCGCCAACCCAGACATCTAGG...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTAATAGGGTCTGGGGCTaGCTCTGTTTGGTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTNRVWG*LCLVFW
Trigger: CCAAAACACCAAACAGAGCCAGCCCCAGACCCTATT...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCAATAGGGTCTGGGGCTaGCTCTGTTTGGTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLNRVWG*LCLVFW
Trigger: CCAAAACACCAAACAGAGCCAGCCCCAGACCCTATT...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCAAGGTGCTTGCCCGATaGCCTTCAAAGTTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFKVLAR*PSKLLD
Trigger: ATCCAACAACTTTGAAGGCCATCGGGCAAGCACCTT...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTGCTGCCCATCCTTTTTaGACTGATCTTCAGGGACAA +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLAAHPF*TDLQGQ
Trigger: TTGTCCCTGAAGATCAGTCCAAAAAGGATGGGCAGC...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCTCCCCAGAAACTACTaGAGGTGTTACTTCCAGATC +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFLPRNY*RCYFQI
Trigger: GATCTGGAAGTAACACCTCCAGTAGTTTCTGGGGAG...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTACCTGTCTGGATGTTTaGAGCAGGACTACTGGAGAG +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTTCLDV*SRTTGE
Trigger: CTCTCCAGTAGTCCTGCTCCAAACATCCAGACAGGT...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTGGGGAGAAACCATTGTaGTTGACTGTGAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLGEKPL*LTVKRE
Trigger: TTCCCTCTTCACAGTCAACCACAATGGTTTCTCCCC...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCTACTGTCCAGCTCTGTaGATAACTGCTCTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFYCPAL*ITALFP
Trigger: TGGGAACAGAGCAGTTATCCACAGAGCTGGACAGTA...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCAGGCCTGCAGTGCTGTaGTTGAAGTTTCCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFRPAVL*LKFPLR
Trigger: TCTCAAAGGAAACTTCAACCACAGCACTGCAGGCCT...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTCTTGGCTTCGGTTCTaGGCCAAAGCCAGGTTAATA +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLSWLRF*AKARLI
Trigger: TATTAACCTGGCTTTGGCTCAGAACCGAAGCCAAGA...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCTTGGCTTCGGTTCTaGGCCAAAGCCAGGTTAATA +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTSWLRF*AKARLI
Trigger: TATTAACCTGGCTTTGGCTCAGAACCGAAGCCAAGA...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCCGCCTCCATCCTAACTaGATTTCCAGCTCCCATGGG +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVRLHPN*ISSSHG
Trigger: CCCATGGGAGCTGGAAATTCAGTTAGGATGGAGGCG...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCTGCCATCATGGAAGATaGCACATTTCCACCCGGGGG +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVCHHGR*HISTRG
Trigger: CCCCCGGGTGGAAATGTGTCATCTTCCATGATGGCA...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCAAAGATCCTGAGGGATaGCTTTGCTGCTGTATATGG +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFKDPEG*LCCCIW
Trigger: CCATATACAGCAGCAAAGTCATCCCTCAGGATCTTT...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCGGTCCCATCTGCTGCTaGGTTTGGTTAACCGTTGGG +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVGPICC*VWLTVG
Trigger: CCCAACGGTTAACCAAACTCAGCAGCAGATGGGACC...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTATGCCATGAATTCCCATaGGGCTGGGCTGCATCATAT +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLCHEFP*GWAASY
Trigger: ATATGATGCAGCCCAGCCTCATGGGAATTCATGGCA...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTTTGTTCATGTTGCCATaGATTCCCATGAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCLFMLP*IPMRLG
Trigger: GCCCAGCCTCATGGGAATTCATGGCAACATGAACAA...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTTTGCTGAGGTTCACTTaGGGAACCCCAGAAGTACCA +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCLLRFT*GTPEVP
Trigger: TGGTACTTCTGGGGTTCCTCAAGTGAACCTCAGCAA...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCAGGATCATAGGGTTCTaGGGGTTCAAGGTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLRIIGF*GFKVPC
Trigger: ACAAGGAACCTTGAACCCTCAGAACCCTATGATCCT...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTAGGATCATAGGGTTCTaGGGGTTCAAGGTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTRIIGF*GFKVPC
Trigger: ACAAGGAACCTTGAACCCTCAGAACCCTATGATCCT...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCATTATTCCCCTGCATTTaGTTGGTCATAATCTGCTCT +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTALFPCI*LVIICS
Trigger: AGAGCAGATTATGACCAATCAAATGCAGGGGAATAA...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTAACCTGGTGGCCGGTTTaGAAATTCTGGCAGTTTAGG +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLTWWPV*KFWQFR
Trigger: CCTAAACTGCCAGAATTTTCAAACCGGCCACCAGGT...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTGACTGGAAGCCTAACTaGTTTGGGATCCTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCDWKPN*FGILLH
Trigger: ATGCAGCAGGATCCCAAATCAGTTAGGCTTCCAGTC...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTACTGCTATGGAGGCATTaGGTCTTTCTGGTGACAGAC +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLLLWRH*VFLVTD
Trigger: GTCTGTCACCAGAAAGACTCAATGCCTCCATAGCAG...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACATTCATGGTAAGATTTaGAGGTGCTTGCCCGATGGC +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHIHGKI*RCLPDG
Trigger: GCCATCGGGCAAGCACCTTCAAATCTTACCATGAAT...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGAGGGCTGCATTTGTCTaGGAGGCCAGAGTAAGTTTA +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQRAAFV*EARVSL
Trigger: TAAACTTACTCTGGCCTCTCAGACAAATGCAGCCCT...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCAGGGCTGCATTTGTCTaGGAGGCCAGAGTAAGTTTA +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLRAAFV*EARVSL
Trigger: TAAACTTACTCTGGCCTCTCAGACAAATGCAGCCCT...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCGACACAGTAGAATTCTaGGGATTCAGCCCACTGTTG +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLDTVEF*GFSPLL
Trigger: CAACAGTGGGCTGAATCCTCAGAATTCTACTGTGTC...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTGACACAGTAGAATTCTaGGGATTCAGCCCACTGTTG +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTDTVEF*GFSPLL
Trigger: CAACAGTGGGCTGAATCCTCAGAATTCTACTGTGTC...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCCATCCTTTTTGGACTaGTCTTCAGGGACAACCATT +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFPSFLD*SSGTTI
Trigger: AATGGTTGTCCCTGAAGATCAGTCCAAAAAGGATGG...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGCCGCATTGGGCATTGTaGCAACTGTTGACATCAATG +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQPHWAL*QLLTSM
Trigger: CATTGATGTCAACAGTTGTCACAATGCCCAATGCGG...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCGATGCTATGCCACCATaGTTGCTTTTTGTGGTCGGT +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLDAMPP*LLFVVG
Trigger: ACCGACCACAAAAAGCAATCATGGTGGCATAGCATC...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCAGTAGAGCTGGAGGCTaGAGCAGGTCGAGAAGATCG +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVSRAGG*SRSRRS
Trigger: CGATCTTCTCGACCTGCTTCAGCCTCCAGCTCTACT...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACCCCCATTGCACTTTATaGAACAGGTTGCAGGGACTA +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHPHCTL*NRLQGL
Trigger: TAGTCCCTGCAACCTGTTTCATAAAGTGCAATGGGG...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGCTCTGTACCAGGTGCTaGGGAATCAGAAATGAACAG +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQLCTRC*GIRNEQ
Trigger: CTGTTCATTTCTGATTCCTCAGCACCTGGTACAGAG...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS-3UTR TCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACGCAAAAGTGATGGCGTaGGAAGAGTTCTATCCTAGC +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHAKVMA*EEFYPS
Trigger: GCTAGGATAGAACTCTTCTCACGCCATCACTTTTGC...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS-3UTR GCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTGAAGCTGCTGGTTGTTaGTCTGAGCAAGGATCCGTA +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCEAAGC*SEQGSV
Trigger: TACGGATCCTTGCTCAGAGCAACAACCAGCAGCTTC...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTATATTCCTGGACCACTTaGCATAGGAAATCCCGCCTC +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLYSWTT*HRKSRL
Trigger: GAGGCGGGATTTCCTATGGCAAGTGGTCCAGGAATA...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTTATTCCTGGACCACTTaGCATAGGAAATCCCGCCTC +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCYSWTT*HRKSRL
Trigger: GAGGCGGGATTTCCTATGGCAAGTGGTCCAGGAATA...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTATGTTGCTGCTGCTGCTaGAGCTGGGGAAAATTAGCT +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLCCCCC*SWGKLA
Trigger: AGCTAATTTTCCCCAGCTGCAGCAGCAGCAGCAACA...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTGTTGTTGCTGCTGCTaGTGCAGCTGGGGAAAATTA +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTCCCCC*CSWGKL
Trigger: TAATTTTCCCCAGCTGCAGCAGCAGCAGCAACAACA...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTACTTCCACCCTTGGTTTaGAGTCATTGTGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLLPPLV*SHCAQR
Trigger: TCTCTGGGCACAATGACTGCAAACCAAGGGTGGAAG...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTTTGGTGGTTGCTGCTaGATCACCATGAAGTTAGGT +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLFGGCC*ITMKLG
Trigger: ACCTAACTTCATGGTGATGCAGCAGCAACCACCAAA...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCTGGTTTGGTGGTTGCTaGTGCATCACCATGAAGTTA +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFWFGGC*CITMKL
Trigger: TAACTTCATGGTGATGCAGCAGCAACCACCAAACCA...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTCTGGACATTTTGATTTaGTTGCAGCTGAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCLDILI*LQLRGS
Trigger: GGAGCCCCTCAGCTGCAAGCAAATCAAAATGTCCAG...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCAGCTCCTTGACCACCTaGATGCTGGACATTTTGATT +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFSSLTT*MLDILI
Trigger: AATCAAAATGTCCAGCATGCAGGTGGTCAAGGAGCT...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCTGCACCATATTTCCTTaGATGTTTGGAGTTGGTCCC +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFCTIFP*MFGVGP
Trigger: GGGACCAACTCCAAACATGCAAGGAAATATGGTGCA...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCTTGTTCACAGGCCCTTaGTGGGGCAGCATCTGTCCT +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVLFTGP*WGSICP
Trigger: AGGACAGATGCTGCCCCAGCAAGGGCCTGTGAACAA...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCGATTTGGGATCCTGCTaGATCATGAGCATCATCATC +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFDLGSC*IMSIII
Trigger: GATGATGATGCTCATGATGCAGCAGGATCCCAAATC...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTAGATTTGAAGGTGCTTaGCCGATGGCCTTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLRFEGA*PMAFKV
Trigger: AACTTTGAAGGCCATCGGGCAAGCACCTTCAAATCT...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTACTGTTGCTTGGACTTaGCCGTTTTGTTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTTVAWT*PFCCSR
Trigger: TCTGGAGCAACAAAACGGGCAAGTCCAAGCAACAGT...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCACTCAATTCGGGATaGACAAGGGATGAACACAGC +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTSLNSG*TRDEHS
Trigger: GCTGTGTTCATCCCTTGTGCATCCCGAATTGAGTGA...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGCTATGCCACCATGATTaGTTTTTGTGGTCGGTACGG +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQLCHHD*FLWSVR
Trigger: CCGTACCGACCACAAAAAGCAATCATGGTGGCATAG...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCCTATGCCACCATGATTaGTTTTTGTGGTCGGTACGG +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLLCHHD*FLWSVR
Trigger: CCGTACCGACCACAAAAAGCAATCATGGTGGCATAG...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTAGGGCTCAACAGTCCTaGTTTCCCCATTGCACTTTA +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTRAQQS*FPHCTL
Trigger: TAAAGTGCAATGGGGAAAGCAGGACTGTTGAGCCCT...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCCACAGGTTGCCAGTTTaGAACCTCTGCTACAGAAGT +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLHRLPV*NLCYRS
Trigger: ACTTCTGTAGCAGAGGTTGCAAACTGGCAACCTGTG...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS-3UTR GCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCAATCCAACCACAGGTTaGCAGTTTGCAACCTCTGCT +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLNPTTG*QFATSA
Trigger: AGCAGAGGTTGCAAACTGGCAACCTGTGGTTGGATT...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS-3UTR CCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCGTACTTTTAGCTTGCTaGACTCCATGTGTAACAAAT +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPVLLAC*TPCVTN
Trigger: ATTTGTTACACATGGAGTCCAGCAAGCTAAAAGTAC...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGCATCCTTATTATTCCTaGACCACTTGCCATAGGAAA +
Preference number: 4 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRHPYYS*TTCHRK
Trigger: TTTCCTATGGCAAGTGGTCCAGGAATAATAAGGATG...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCAACAGGCACCTGAGTTaGGGCAGTAAACTGGGGTCG +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVNRHLS*GSKLGS
Trigger: CGACCCCAGTTTACTGCCCCAACTCAGGTGCCTGTT...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTATGGGTTATTTTGAGGTaGCCTTGGTCCCATCTGCTG +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLWVILR*PWSHLL
Trigger: CAGCAGATGGGACCAAGGCCACCTCAAAATAACCCA...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACCATGAAGTTAGGTaGCACATTTCCCTGTTGAAC +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFHHEVR*HISLLN
Trigger: GTTCAACAGGGAAATGTGCCACCTAACTTCATGGTG...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCTGGCCCCTGGTTTGGTaGTTGCTGCTGCATCACCAT +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVWPLVW*LLLHHH
Trigger: ATGGTGATGCAGCAGCAACCACCAAACCAGGGGCCA...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCCTGAATTCCCAGGGGTaGTTGCTGTGGTCGAAGGCA +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVLNSQG*LLWSKA
Trigger: TGCCTTCGACCACAGCAACCACCCCTGGGAATTCAG...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCAAGGTTCCTTGTTGCTaGACCATCTGGCCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVKVPCC*TIWPWE
Trigger: CTCCCAGGGCCAGATGGTCCAGCAACAAGGAACCTT...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTACATCATCTGGTTATGTaGCGCCATCATTTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLHHLVM*RHHLWA
Trigger: GGCCCACAAATGATGGCGCCACATAACCAGATGATG...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTTGCATGTTTGGAGTTaGTCCCCTCATTATCTGGGC +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLLHVWS*SPHYLG
Trigger: GCCCAGATAATGAGGGGACCAACTCCAAACATGCAA...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTTGAAAGACATCCCATaGCCTGAGAAGTGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTLKDIP*PEKWFP
Trigger: GGGAAACCACTTCTCAGGCCATGGGATGTCTTTCAA...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTTGAAAGACATCCCATaGCCTGAGAAGTGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQLKDIP*PEKWFP
Trigger: GGGAAACCACTTCTCAGGCCATGGGATGTCTTTCAA...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTATTGACTGGGAAGCCTaGATTTTGACCACAGGACAT +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLIDWEA*ILTTGH
Trigger: ATGTCCTGTGGTCAAAATCCAGGCTTCCCAGTCAAT...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAAGGTGCTTGCCCGATaGCCTTCAAAGTTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHKVLAR*PSKLLD
Trigger: ATCCAACAACTTTGAAGGCCATCGGGCAAGCACCTT...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTGCTGCCCATCCTTTTTaGACTGATCTTCAGGGACAA +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTAAHPF*TDLQGQ
Trigger: TTGTCCCTGAAGATCAGTCCAAAAAGGATGGGCAGC...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGCTCCCCAGAAACTACTaGAGGTGTTACTTCCAGATC +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQLPRNY*RCYFQI
Trigger: GATCTGGAAGTAACACCTCCAGTAGTTTCTGGGGAG...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTACTGGAGGGATGCTTaGTGCAACGTTAGAACTGAC +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTYWRDA*CNVRTD
Trigger: GTCAGTTCTAACGTTGCACCAAGCATCCCTCCAGTA...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTAGAGTTGGTTGTCAGTaGGGCTGCAGGAATTGTGCT +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCRVGCQ*GCRNCA
Trigger: AGCACAATTCCTGCAGCCCCACTGACAACCAACTCT...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAAAGGTCGACCTGTCTaGATGTTTGGAGCAGGACTA +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHKGRPV*MFGAGL
Trigger: TAGTCCTGCTCCAAACATCCAGACAGGTCGACCTTT...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTATGAGAAGGGACAACTaGAGAAGACGTACAAGGAGG +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTMRRDN*RRRTRR
Trigger: CCTCCTTGTACGTCTTCTCCAGTTGTCCCTTCTCAT...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGGACCCTGGACTATTaGTCAAAAGGGGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHRTLDY*SKGEKP
Trigger: TGGTTTCTCCCCTTTTGACCAATAGTCCAGGGTCCT...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCCTTACTAGACGAGACTaGGCTTCGCCGGTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVLTRRD*ASPVAR
Trigger: TCTGGCAACCGGCGAAGCCCAGTCTCGTCTAGTAAG...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCCTTTCTTACATGCCTTaGTCAACAAAATTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: NLELQLATPKGLNSPAFPLSYMP*STKFGQ
Trigger: TTGGCCAAATTTTGTTGACCAAGGCATGTAAGAAAG...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCAGGCCTGCAGTGCTGTaGTTGAAGTTTCCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLRPAVL*LKFPLR
Trigger: TCTCAAAGGAAACTTCAACCACAGCACTGCAGGCCT...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTGGAGTTTCTTCGGCCTaGGATTTTGGACTTTTCAAC +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLGVSSA*DFGLFN
Trigger: GTTGAAAAGTCCAAAATCCCAGGCCGAAGAAACTCC...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTCCTTCCCCTTCAATCTaGACGGAGAGAATCCCTAAA +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCPSPSI*TERIPK
Trigger: TTTAGGGATTCTCTCCGTTCAGATTGAAGGGGAAGG...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCACAGGCTGCATTGGGTaGTGTGGGGGAGCTAAAGAT +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVTGCIG*CGGAKD
Trigger: ATCTTTAGCTCCCCCACATCACCCAATGCAGCCTGT...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCCCTGGGTTGCTCATCTaGGGAAAGTTTGTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVPGLLI*GKFVWA
Trigger: AGCCCACACAAACTTTCCTCAGATGAGCAACCCAGG...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTACCATGTTGGTTTGTTaGATGCTAACATCAGGCATC +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLTMLVC*MLTSGI
Trigger: GATGCCTGATGTTAGCATTCAACAAACCAACATGGT...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCCACTCTGCAATAAGTTaGCCAACAATGGGCTCGTTA +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLHSAIS*PTMGSL
Trigger: TAACGAGCCCATTGTTGGTCAACTTATTGCAGAGTG...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCTCTTTGTTTATCAGGTaGTGGTGGCACGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVSLFIR*WWHGGR
Trigger: CCTGCCTCCGTGCCACCATCACCTGATAAACAAAGA...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACTTTCTGGTGACAGACTaGTTTCTGAAGGTTCTGTGC +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHFLVTD*FLKVLC
Trigger: GCACAGAACCTTCAGAAATCAGTCTGTCACCAGAAA...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCGGATTTAGGCCTTGTTaGTCAAAGCCCCTGTTTAAA +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFGFRPC*SKPLFK
Trigger: TTTAAACAGGGGCTTTGATCAACAAGGCCTAAATCC...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTAATTCATGGTAAGATTTaGAGGTGCTTGCCCGATGGC +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLIHGKI*RCLPDG
Trigger: GCCATCGGGCAAGCACCTTCAAATCTTACCATGAAT...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCCCATCCTTTTTGGACTaGTCTTCAGGGACAACCATT +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLPSFLD*SSGTTI
Trigger: AATGGTTGTCCCTGAAGATCAGTCCAAAAAGGATGG...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCGAGTTGTCAAGAAGTTaGCTTAACGATGTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFELSRS*LNDVGA
Trigger: AGCACCAACATCGTTAAGTCAACTTCTTGACAACTC...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTCATTGTGACAACTGTTaGCATCAATGCAGACTGCAA +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLHCDNC*HQCRLQ
Trigger: TTGCAGTCTGCATTGATGTCAACAGTTGTCACAATG...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCAGTGTTCTGATCTGCTaGGGTGTTCACCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVSVLIC*GVHLRA
Trigger: AGCCCTCAGGTGAACACCTCAGCAGATCAGAACACT...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCGAGGGAAGAGTGTTCTaGTCTGCTGAGGTGTTCACC +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVEGRVF*SAEVFT
Trigger: GGTGAACACCTCAGCAGATCAGAACACTCTTCCCTC...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTCTTGCCATCACTGACTaGTATAAATATTCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLLAITD*YKYSGV
Trigger: GACCCCTGAATATTTATATCAGTCAGTGATGGCAAG...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS-3UTR TCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTAAGACTGAGGCGCAATaGGGTTTTATTTGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTKTEAQ*GFICPR
Trigger: CCTTGGACAAATAAAACCTCATTGCGCCTCAGTCTT...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS-3UTR TCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTTCTCTGCAAAAGTaGTGGCGTGAGAAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHSSLQK*WREKSS
Trigger: AGAACTCTTCTCACGCCATCACTTTTGCAGAGAACT...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS-3UTR TCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCGGCTGGTGGCCGGTTTaGAAATTCTGGCAGTTTAGG +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVGWWPV*KFWQFR
Trigger: CCTAAACTGCCAGAATTTTCAAACCGGCCACCAGCC...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612493.4
CDS-3UTR GCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTATGTTGTTGCTGCTGCTaGTGCAGCTGGGGAAAATTA +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLCCCCC*CSWGKL
Trigger: TAATTTTCCCCAGCTGCAGCAGCAGCAGCAACAACA...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCTGTGGGGGTCTTGCCTaGAACTGTTGTTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVCGGLA*NCCCCC
Trigger: ACAGCAGCAACAACAGTTGCAGGCAAGACCCCCACA...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTTTGGTGGTTGCTGCTaGATCACCATGAAGTTAGGT +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTFGGCC*ITMKLG
Trigger: ACCTAACTTCATGGTGATGCAGCAGCAACCACCAAA...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTGGTTTGGTGGTTGCTaGTGCATCACCATGAAGTTA +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLWFGGC*CITMKL
Trigger: TAACTTCATGGTGATGCAGCAGCAACCACCAAACCA...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCTTCAAGGTTCCTTGTTaGTGGACCATCTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVFKVPC*WTIWPW
Trigger: CCAGGGCCAGATGGTCCAGCAACAAGGAACCTTGAA...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCTGCTGGGAAAGCATCTaGTTGGGTGGGGTCATCCTT +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVCWESI*LGGVIL
Trigger: AAGGATGACCCCACCCAAGCAGATGCTTTCCCAGCA...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTGCACCATATTTCCTTaGATGTTTGGAGTTGGTCCC +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQCTIFP*MFGVGP
Trigger: GGGACCAACTCCAAACATGCAAGGAAATATGGTGCA...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCACTGACATCGTTATTTaGTGTAGTAGCAGGATCACC +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFTDIVI*CSSRIT
Trigger: GGTGATCCTGCTACTACAGCAAATAACGATGTCAGT...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGCTCCACTGAAAGGTaGATTGAAAGACATCCCATG +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHSSTER*IERHPM
Trigger: CATGGGATGTCTTTCAATGCACCTTTCAGTGGAGCT...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCAGCAGATATGTCACTCTaGAATAAGTTGACCAACAAT +
Preference number: 4 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAADMSL*NKLTNN
Trigger: ATTGTTGGTCAACTTATTGCAGAGTGACATATCTGC...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGACTGATTTGGGATCCTaGTGCATCATGAGCATCATC +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQTDLGS*CIMSII
Trigger: GATGATGCTCATGATGCAGCAGGATCCCAAATCAGT...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTAGATTTGAAGGTGCTTaGCCGATGGCCTTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTRFEGA*PMAFKV
Trigger: AACTTTGAAGGCCATCGGGCAAGCACCTTCAAATCT...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCACTTGCCCGTTTTGTTaGTCCAGAATTAGACTGCTT +
Preference number: 4 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFTCPFC*SRIRLL
Trigger: AAGCAGTCTAATTCTGGAGCAACAAAACGGGCAAGT...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTACTGTTGCTTGGACTTaGCCGTTTTGTTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCTVAWT*PFCCSR
Trigger: TCTGGAGCAACAAAACGGGCAAGTCCAAGCAACAGT...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACTTCAGTCTCTCCATCTaGACCATATTGTTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHFSLSI*TILFFP
Trigger: GGGGAAGAACAATATGGTGCAGATGGAGAGACTGAA...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCAGCTCTGTGGATAACTaGTCTGTTCCCATGAGCCCC +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVSSVDN*SVPMSP
Trigger: GGGGCTCATGGGAACAGAGCAGTTATCCACAGAGCT...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTTTCTTCGCTTGGATTaGACCGCACTGGTTATGTCT +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLFLRLD*TALVMS
Trigger: AGACATAACCAGTGCGGTGCAATCCAAGCGAAGAAA...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTAAGGGCTCAACAGTCCTaGTTTCCCCATTGCACTTTA +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLRAQQS*FPHCTL
Trigger: TAAAGTGCAATGGGGAAAGCAGGACTGTTGAGCCCT...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCGGGTCTGTGTTATGCTaGAGGTACACAGAGCATGGG +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVGSVLC*RYTEHG
Trigger: CCCATGCTCTGTGTACCTGCAGCATAACACAGACCC...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS-3UTR GCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTGCTACAGAAGTTCTCTaGAAAAGTGATGGCGTGAGA +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTATEVL*KSDGVR
Trigger: TCTCACGCCATCACTTTTGCAGAGAACTTCTGTAGC...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS-3UTR CCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTCTGGGGAAAATTAGCTaGGTTCATTTGTCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLLGKIS*VHLSVH
Trigger: GTGAACAGACAAATGAACCCAGCTAATTTTCCCCAG...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCAGTTTGGTTAACCGTTaGGGAGGATGCAGGGGATCC +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVSLVNR*GGCRGS
Trigger: GGATCCCCTGCATCCTCCCCAACGGTTAACCAAACT...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTCACCATGAAGTTAGGTaGCACATTTCCCTGTTGAAC +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTHHEVR*HISLLN
Trigger: GTTCAACAGGGAAATGTGCCACCTAACTTCATGGTG...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCCACCATGAAGTTAGGTaGCACATTTCCCTGTTGAAC +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLHHEVR*HISLLN
Trigger: GTTCAACAGGGAAATGTGCCACCTAACTTCATGGTG...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTATTGCATGTTTGGAGTTaGTCCCCTCATTATCTGGGC +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLLHVWS*SPHYLG
Trigger: GCCCAGATAATGAGGGGACCAACTCCAAACATGCAA...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCCCATGGCCTGAGAAGTaGTTTCCCGAGGCACTGTTT +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVPWPEK*FPEALF
Trigger: AAACAGTGCCTCGGGAAACCACTTCTCAGGCCATGG...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTATTGAAAGACATCCCATaGCCTGAGAAGTGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLLKDIP*PEKWFP
Trigger: GGGAAACCACTTCTCAGGCCATGGGATGTCTTTCAA...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCATTGACTGGGAAGCCTaGATTTTGACCACAGGACAT +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLIDWEA*ILTTGH
Trigger: ATGTCCTGTGGTCAAAATCCAGGCTTCCCAGTCAAT...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTGTTCCTTCCTACTCTaGGAATTCTGGCAATCACTG +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTCSFLL*EFWQSL
Trigger: CAGTGATTGCCAGAATTCCCAGAGTAGGAAGGAACA...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACTGTTCCTTCCTACTCTaGGAATTCTGGCAATCACTG +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHCSFLL*EFWQSL
Trigger: CAGTGATTGCCAGAATTCCCAGAGTAGGAAGGAACA...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTTACTGGAGGGATGCTTaGTGCAACGTTAGAACTGAC +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCYWRDA*CNVRTD
Trigger: GTCAGTTCTAACGTTGCACCAAGCATCCCTCCAGTA...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTAAAAGGTCGACCTGTCTaGATGTTTGGAGCAGGACTA +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLKGRPV*MFGAGL
Trigger: TAGTCCTGCTCCAAACATCCAGACAGGTCGACCTTT...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTGGGGAGAAACCATTGTaGTTGACTGTGAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCGEKPL*LTVKRE
Trigger: TTCCCTCTTCACAGTCAACCACAATGGTTTCTCCCC...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCGTTGCCAGAGGACCCTaGACTATTGGTCAAAAGGGG +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVVARGP*TIGQKG
Trigger: CCCCTTTTGACCAATAGTCCAGGGTCCTCTGGCAAC...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCGGTAGAAGTTCTGGATaGGATCCCACCTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVGRSSG*DPTFSS
Trigger: GGAGGAGAAGGTGGGATCCCATCCAGAACTTCTACC...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGGGAGTTTCTTCGGCCTaGGATTTTGGACTTTTCAAC +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQGVSSA*DFGLFN
Trigger: GTTGAAAAGTCCAAAATCCCAGGCCGAAGAAACTCC...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTGGATTTTCTTCGCTTaGATTGCACCGCACTGGTTA +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLWIFFA*IAPHWL
Trigger: TAACCAGTGCGGTGCAATCCAAGCGAAGAAAATCCA...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACTGGATTTTCTTCGCTTaGATTGCACCGCACTGGTTA +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHWIFFA*IAPHWL
Trigger: TAACCAGTGCGGTGCAATCCAAGCGAAGAAAATCCA...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCCAGGTACACAGAGCATaGGTAATCCAGCCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVQVHRA*VIQPKG
Trigger: CCCTTTGGGCTGGATTACCCATGCTCTGTGTACCTG...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS-3UTR TCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTATGGCAGTTTAGGGCCTaGGTTATCCAAGTTAATTCC +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLWQFRA*VIQVNS
Trigger: GGAATTAACTTGGATAACTCAGGCCCTAAACTGCCA...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGATAGACCATTTTCCTTaGATTGCTTCCCAAGGGAGT +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQIDHFP*IASQGS
Trigger: ACTCCCTTGGGAAGCAATTCAAGGAAAATGGTCTAT...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCATAGACCATTTTCCTTaGATTGCTTCCCAAGGGAGT +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLIDHFP*IASQGS
Trigger: ACTCCCTTGGGAAGCAATTCAAGGAAAATGGTCTAT...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTTTTCTGGTGACAGACTaGTTTCTGAAGGTTCTGTGC +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCFLVTD*FLKVLC
Trigger: GCACAGAACCTTCAGAAATCAGTCTGTCACCAGAAA...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGCATTGTGACAACTGTTaGCATCAATGCAGACTGCAA +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQHCDNC*HQCRLQ
Trigger: TTGCAGTCTGCATTGATGTCAACAGTTGTCACAATG...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTAAACTACACCACACTTaGCAGCTTTGCAATGGTTTC +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTKLHHT*QLCNGF
Trigger: GAAACCATTGCAAAGCTGTCAAGTGTGGTGTAGTTT...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS-3UTR TCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTGCCCCATTCAATAAATaGTGCTGGGATCACTGGTTA +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCAPFNK*CWDHWL
Trigger: TAACCAGTGATCCCAGCATCATTTATTGAATGGGGC...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS-3UTR GCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTTGCACCATATTTCCTTaGATGTTTGGAGTTGGTCCC +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCCTIFP*MFGVGP
Trigger: GGGACCAACTCCAAACATGCAAGGAAATATGGTGCA...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCATCTGTCCCGTAAACTaGACCATATTTCCTTGCATG +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLICPVN*TIFPCM
Trigger: CATGCAAGGAAATATGGTGCAGTTTACGGGACAGAT...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACACTGACATCGTTATTTaGTGTAGTAGCAGGATCACC +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHTDIVI*CSSRIT
Trigger: GGTGATCCTGCTACTACAGCAAATAACGATGTCAGT...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTAGCTCCACTGAAAGGTaGATTGAAAGACATCCCATG +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCSSTER*IERHPM
Trigger: CATGGGATGTCTTTCAATGCACCTTTCAGTGGAGCT...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTACTGATTTGGGATCCTaGTGCATCATGAGCATCATC +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCTDLGS*CIMSII
Trigger: GATGATGCTCATGATGCAGCAGGATCCCAAATCAGT...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTATTCAGTCTCTCCATCTaGACCATATTGTTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLFSLSI*TILFFP
Trigger: GGGGAAGAACAATATGGTGCAGATGGAGAGACTGAA...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACGTGACTCAGATGCTATaGCACCATGATTGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHVTQML*HHDCFL
Trigger: CAAAAAGCAATCATGGTGGCATAGCATCTGAGTCAC...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTATCAAGTCGCAGTCCTaGTTGTTTACTTGGATTTTC +
Preference number: 4 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLIKSQS*LFTWIF
Trigger: GAAAATCCAAGTAAACAAGCAGGACTGCGACTTGAT...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTTTTGCCCCCACTACTaGTATTCACACACAGTACTT +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQFCPHY*YSHTVL
Trigger: AAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAA...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTTTTGCCCCCACTACTaGTATTCACACACAGTACTT +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLFCPHY*YSHTVL
Trigger: AAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAA...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCCTGGGGAAAATTAGCTaGGTTCATTTGTCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLLGKIS*VHLSVH
Trigger: GTGAACAGACAAATGAACCCAGCTAATTTTCCCCAG...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACTTGTTTACCCCAAAATaGCCTGCAGATATGTCACTC +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHLFTPK*PADMSL
Trigger: GAGTGACATATCTGCAGGCCATTTTGGGGTAAACAA...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCAGGCATCTGCTGAAGTaGCCTCTGTTCAACTGGTTG +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVRHLLK*PLFNWL
Trigger: CAACCAGTTGAACAGAGGCCACTTCAGCAGATGCCT...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTACAAAAACAGATCGTaGGCCAGATTTGACCTATGG +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTYKNRS*ARFDLW
Trigger: CCATAGGTCAAATCTGGCCCACGATCTGTTTTTGTA...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS-3UTR TCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTTATTCCCCTGCATTTaGTTGGTCATAATCTGCTCT +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLLFPCI*LVIICS
Trigger: AGAGCAGATTATGACCAATCAAATGCAGGGGAATAA...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTTATTCCCCTGCATTTaGTTGGTCATAATCTGCTCT +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTLFPCI*LVIICS
Trigger: AGAGCAGATTATGACCAATCAAATGCAGGGGAATAA...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTGGATTTAGGCCTTGTTaGTCAAAGCCCCTGTTTAAA +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCGFRPC*SKPLFK
Trigger: TTTAAACAGGGGCTTTGATCAACAAGGCCTAAATCC...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGCACAGCTCATTACTGTaGGGTAAGTTTAGGGAATTA +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQHSSLL*GKFREL
Trigger: TAATTCCCTAAACTTACCTCACAGTAATGAGCTGTG...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCCCGCATTGGGCATTGTaGCAACTGTTGACATCAATG +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVPHWAL*QLLTSM
Trigger: CATTGATGTCAACAGTTGTCACAATGCCCAATGCGG...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGAATTGTGCTTGGCTGTaGTCCTTTCATAACCTGAAT +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQNCAWL*SFHNLN
Trigger: ATTCAGGTTATGAAAGGATCACAGCCAAGCACAATT...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCGATGCTATGCCACCATaGTTGCTTTTTGTGGTCGGT +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVDAMPP*LLFVVG
Trigger: ACCGACCACAAAAAGCAATCATGGTGGCATAGCATC...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCCTGAGGAATCAGAAATaGACAGTAGTGCTAAAGTAC +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLLRNQK*TVVLKY
Trigger: GTACTTTAGCACTACTGTTCATTTCTGATTCCTCAG...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS-3UTR GCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACTCTGTACTTTTAGCTTaGTGGACTCCATGTGTAACA +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHSVLLA*WTPCVT
Trigger: TGTTACACATGGAGTCCAGCAAGCTAAAAGTACAGA...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCCCATTTTCCTTGAATTaGTTCCCAAGGGAGTATTCA +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLPFSLN*FPREYS
Trigger: TGAATACTCCCTTGGGAAGCAATTCAAGGAAAATGG...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTAGTGACTCAGATGCTATaGCACCATGATTGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLVTQML*HHDCFL
Trigger: CAAAAAGCAATCATGGTGGCATAGCATCTGAGTCAC...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR GCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTATCAAGTCGCAGTCCTaGTTGTTTACTTGGATTTTC +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTIKSQS*LFTWIF
Trigger: GAAAATCCAAGTAAACAAGCAGGACTGCGACTTGAT...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACATTTCCTTGCATGTTTaGAGTTGGTCCCCTCATTAT +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHISLHV*SWSPHY
Trigger: ATAATGAGGGGACCAACTCCAAACATGCAAGGAAAT...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTATTTCCTTGCATGTTTaGAGTTGGTCCCCTCATTAT +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTISLHV*SWSPHY
Trigger: ATAATGAGGGGACCAACTCCAAACATGCAAGGAAAT...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTTTGTTTACCCCAAAATaGCCTGCAGATATGTCACTC +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCLFTPK*PADMSL
Trigger: GAGTGACATATCTGCAGGCCATTTTGGGGTAAACAA...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTATTGTTTACCCCAAAATaGCCTGCAGATATGTCACTC +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLLFTPK*PADMSL
Trigger: GAGTGACATATCTGCAGGCCATTTTGGGGTAAACAA...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCATGAGAAGGGACAACTaGAGAAGACGTACAAGGAGG +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVMRRDN*RRRTRR
Trigger: CCTCCTTGTACGTCTTCTCCAGTTGTCCCTTCTCAT...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTAAGGGCTAGCCTCATCTaGATTCAATTCTTTCACTTG +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLRASLI*IQFFHL
Trigger: CAAGTGAAAGAATTGAATCCAGATGAGGCTAGCCCT...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCAGGACCCTGGACTATTaGTCAAAAGGGGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVRTLDY*SKGEKP
Trigger: TGGTTTCTCCCCTTTTGACCAATAGTCCAGGGTCCT...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCAGGCCTGCAGTGCTGTaGTTGAAGTTTCCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVRPAVL*LKFPLR
Trigger: TCTCAAAGGAAACTTCAACCACAGCACTGCAGGCCT...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTTTTCAACTATCTCTTTaGGCTCACTGCTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCFQLSL*AHCFVQ
Trigger: CTGGACAAAGCAGTGAGCCCAAAGAGATAGTTGAAA...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCAGAAAAGTTAGTCAGTaGGACCCCTCTCCATTCCTC +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVRKVSQ*DPSPFL
Trigger: GAGGAATGGAGAGGGGTCCCACTGACTAACTTTTCT...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS-3UTR TCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCTGGCAGTTTAGGGCCTaGGTTATCCAAGTTAATTCC +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVWQFRA*VIQVNS
Trigger: GGAATTAACTTGGATAACTCAGGCCCTAAACTGCCA...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCACAGAATCTAATTTGTaGGTTTGTGGGGTAGCAAAA +
Preference number: 4 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLTESNL*VCGVAK
Trigger: TTTTGCTACCCCACAAACTCACAAATTAGATTCTGT...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGACAGAATCTAATTTGTaGGTTTGTGGGGTAGCAAAA +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQTESNL*VCGVAK
Trigger: TTTTGCTACCCCACAAACTCACAAATTAGATTCTGT...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTTGCTTAAGAACTCTCTaGCCACTCTCAGAAAAGTTA +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCCLRTL*PLSEKL
Trigger: TAACTTTTCTGAGAGTGGTCAGAGAGTTCTTAAGCA...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS-3UTR GCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCTGGTTTGGTGGTTGCTaGTGCATCACCATGAAGTTA +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVWFGGC*CITMKL
Trigger: TAACTTCATGGTGATGCAGCAGCAACCACCAAACCA...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCAGCTCCTTGACCACCTaGATGCTGGACATTTTGATT +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVSSLTT*MLDILI
Trigger: AATCAAAATGTCCAGCATGCAGGTGGTCAAGGAGCT...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCAGCTCCACTGAAAGGTaGATTGAAAGACATCCCATG +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVSSTER*IERHPM
Trigger: CATGGGATGTCTTTCAATGCACCTTTCAGTGGAGCT...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACGCAGATATGTCACTCTaGAATAAGTTGACCAACAAT +
Preference number: 4 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHADMSL*NKLTNN
Trigger: ATTGTTGGTCAACTTATTGCAGAGTGACATATCTGC...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCTTTCTTCGCTTGGATTaGACCGCACTGGTTATGTCT +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVFLRLD*TALVMS
Trigger: AGACATAACCAGTGCGGTGCAATCCAAGCGAAGAAA...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTATCAAGTCGCAGTCCTaGTTGTTTACTTGGATTTTC +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCIKSQS*LFTWIF
Trigger: GAAAATCCAAGTAAACAAGCAGGACTGCGACTTGAT...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGGTACTTTTAGCTTGCTaGACTCCATGTGTAACAAAT +
Preference number: 4 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQVLLAC*TPCVTN
Trigger: ATTTGTTACACATGGAGTCCAGCAAGCTAAAAGTAC...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTATTTCCTTGCATGTTTaGAGTTGGTCCCCTCATTAT +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCISLHV*SWSPHY
Trigger: ATAATGAGGGGACCAACTCCAAACATGCAAGGAAAT...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCATTGACTGGGAAGCCTaGATTTTGACCACAGGACAT +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVIDWEA*ILTTGH
Trigger: ATGTCCTGTGGTCAAAATCCAGGCTTCCCAGTCAAT...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCCCTGTCATCATTAACTaGTTCTGGGGAAGTACTACA +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVPVIIN*FWGSTT
Trigger: TGTAGTACTTCCCCAGAATCAGTTAATGATGACAGG...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR TCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTAACAGCTAATATTTATTaGGCATGTTCTAGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLTANIY*ACSRCQ
Trigger: TTGGCACCTAGAACATGCTCAATAAATATTAGCTGT...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS-3UTR GCA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTGCAGATATGTCACTCTaGAATAAGTTGACCAACAAT +
Preference number: 4 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCADMSL*NKLTNN
Trigger: ATTGTTGGTCAACTTATTGCAGAGTGACATATCTGC...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR GCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCCCCTGTACTCTAGGCTaGTTAGGAAATGTGAAAACT +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVPCTLG*LGNVKT
Trigger: AGTTTTCACATTTCCTAAGCAGCCTAGAGTACAGGG...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCAGGGCTAGCCTCATCTaGATTCAATTCTTTCACTTG +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVRASLI*IQFFHL
Trigger: CAAGTGAAAGAATTGAATCCAGATGAGGCTAGCCCT...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTACTTTCTTACATGCCTTaGTCAACAAAATTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLLSYMP*STKFGQ
Trigger: TTGGCCAAATTTTGTTGACCAAGGCATGTAAGAAAG...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCTTTCAACTATCTCTTTaGGCTCACTGCTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVFQLSL*AHCFVQ
Trigger: CTGGACAAAGCAGTGAGCCCAAAGAGATAGTTGAAA...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CCA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTACTCAACTCTGCTATTaGTACCACAAAAGAAGATAT +
Preference number: 4 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTTQLCY*YHKRRY
Trigger: ATATCTTCTTTTGTGGTACCAATAGCAGAGTTGAGT...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS-3UTR GCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCCCATTTTCCTTGAATTaGTTCCCAAGGGAGTATTCA +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVPFSLN*FPREYS
Trigger: TGAATACTCCCTTGGGAAGCAATTCAAGGAAAATGG...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCCATCCTTATTATTCCTaGACCACTTGCCATAGGAAA +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVHPYYS*TTCHRK
Trigger: TTTCCTATGGCAAGTGGTCCAGGAATAATAAGGATG...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR TCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCGAAAATTTTATGTTCTaGGGTATGTGTAAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVENFMF*GMCKGP
Trigger: TGGCCCTTTACACATACCTCAGAACATAAAATTTTC...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CCA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCGTACTTTTAGCTTGCTaGACTCCATGTGTAACAAAT +
Preference number: 4 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVVLLAC*TPCVTN
Trigger: ATTTGTTACACATGGAGTCCAGCAAGCTAAAAGTAC...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS CCA 90 bp GCCCTGGGAGGGCACGATTTGCTGGTGCATGCCCATCAGCTGAGATaGTGGGCCCTGCTGGGGCTGGCCTTGCATGTTGCTGAGGTTCAC +
Preference number: 5 (lower is better)
Translates to: ALGGHDLLVHAHQLR*WALLGLALHVAEVH
Trigger: GTGAACCTCAGCAACATGCAAGGCCAGCCCCAGCAGGGCCCACCATCTCAGCTGATGGGCATGCACCAGCAAATCGTGCCCTCCCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS TCA 90 bp GCCTCCTGGGACAGATGGTGCTTCACTGCCACTTGCTTCAGGGAGTaGGGCCATCTCCGCCAGTGGCGAGCTGGAAGGATTCTGCGGGCT +
Preference number: 5 (lower is better)
Translates to: ASWDRWCFTATCFRE*GHLRQWRAGRILRA
Trigger: AGCCCGCAGAATCCTTCCAGCTCGCCACTGGCGGAGATGGCCTCACTCCCTGAAGCAAGTGGCAGTGAAGCACCATCTGTCCCAGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS GCA 90 bp GAGGAGGGTGAGGAGGCAGGAGACTTGTTGGTGAGGTGGGGCTGCTaGAAGGGAGTTGGGACCCTAGAGGGCCCTCCCTGCAAACTCTTC +
Preference number: 5 (lower is better)
Translates to: EEGEEAGDLLVRWGC*KGVGTLEGPPCKLF
Trigger: GAAGAGTTTGCAGGGAGGGCCCTCTAGGGTCCCAACTCCCTTGCAGCAGCCCCACCTCACCAACAAGTCTCCTGCCTCCTCACCCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS GCA 90 bp AAGGAGGAGGGTGAGGAGGCAGGAGACTTGTTGGTGAGGTGGGGCTaGTGCAAGGGAGTTGGGACCCTAGAGGGCCCTCCCTGCAAACTC +
Preference number: 5 (lower is better)
Translates to: KEEGEEAGDLLVRWG*CKGVGTLEGPPCKL
Trigger: GAGTTTGCAGGGAGGGCCCTCTAGGGTCCCAACTCCCTTGCAGCAGCCCCACCTCACCAACAAGTCTCCTGCCTCCTCACCCTCCTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CCA 90 bp TGGCGCCATCATTTGTGGGCCCTGCTGGGAAAGCATCTGCTTGGGTaGGGTCATCCTTTGGGGCGAGGGCCCAAGATTTTGGCTCGGGGG +
Preference number: 5 (lower is better)
Translates to: WRHHLWALLGKHLLG*GHPLGRGPKILARG
Trigger: CCCCCGAGCCAAAATCTTGGGCCCTCGCCCCAAAGGATGACCCCACCCAAGCAGATGCTTTCCCAGCAGGGCCCACAAATGATGGCGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CCA 90 bp GGAGGGTGGGAAGGCGTCTGTACCGTGGCTAAGGATGGTCTTGCCTaGAGTTGCTGTTGCATTGGGCCGGGCAAGGGAGCCTTCTTCCAC +
Preference number: 5 (lower is better)
Translates to: GGWEGVCTVAKDGLA*SCCCIGPGKGAFFH
Trigger: GTGGAAGAAGGCTCCCTTGCCCGGCCCAATGCAACAGCAACTCCAGGCAAGACCATCCTTAGCCACGGTACAGACGCCTTCCCACCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CCA 90 bp CTGGGAGGGCACGATTTGCTGGTGCATGCCCATCAGCTGAGATGGTaGGCCCTGCTGGGGCTGGCCTTGCATGTTGCTGAGGTTCACTTG +
Preference number: 5 (lower is better)
Translates to: LGGHDLLVHAHQLRW*ALLGLALHVAEVHL
Trigger: CAAGTGAACCTCAGCAACATGCAAGGCCAGCCCCAGCAGGGCCCACCATCTCAGCTGATGGGCATGCACCAGCAAATCGTGCCCTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS GCA 90 bp GTGAAGGCATGTTGTTTGGGCCTCCTGGGACAGATGGTGCTTCACTaGCACTTGCTTCAGGGAGTGAGGCCATCTCCGCCAGTGGCGAGC +
Preference number: 5 (lower is better)
Translates to: VKACCLGLLGQMVLH*HLLQGVRPSPPVAS
Trigger: GCTCGCCACTGGCGGAGATGGCCTCACTCCCTGAAGCAAGTGGCAGTGAAGCACCATCTGTCCCAGGAGGCCCAAACAACATGCCTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CCA 90 bp GTTATTTGCTGTAGTAGCAGGATCACCATGCTGCTGGGCCATGTGTaGGCTGGGCCCTGGTGGCCGCAGGACCTGTCCCTGAATGCCCAT +
Preference number: 5 (lower is better)
Translates to: VICCSSRITMLLGHV*AGPWWPQDLSLNAH
Trigger: ATGGGCATTCAGGGACAGGTCCTGCGGCCACCAGGGCCCAGCCCACACATGGCCCAGCAGCATGGTGATCCTGCTACTACAGCAAATAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CCA 90 bp TCATTTGTTGCTGCTGCTGCTGCTGCTGCTGAGACTGTGGCTGACTaGGAGGTGGTGGCTGCTGCTGCTGAGGCAGTTGTGGCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: SFVAAAAAAAETVAD*EVVAAAAEAVVAVA
Trigger: AGCCACAGCCACAACTGCCTCAGCAGCAGCAGCCACCACCTCCCAGTCAGCCACAGTCTCAGCAGCAGCAGCAGCAGCAGCAACAAATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS TCA 90 bp TCTGAGCAAGGATCCGTAGCCGCTCCGCTGCTTCCCGGGGGATGTTaGATGTCACACGCACGCTGTTCCAGGGCTCCACCTTCTGTACTT +
Preference number: 5 (lower is better)
Translates to: SEQGSVAAPLLPGGC*MSHARCSRAPPSVL
Trigger: AAGTACAGAAGGTGGAGCCCTGGAACAGCGTGCGTGTGACATTCAACATCCCCCGGGAAGCAGCGGAGCGGCTACGGATCCTTGCTCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS TCA 90 bp CTAGATGTCTGGGTTGGCGCAGCCACATTTGGGAAGTGGTGGCCGTaGGAGCTGGGCAGGGAATTTACAGGGGGTTGCTGGGGAGTTGCA +
Preference number: 5 (lower is better)
Translates to: LDVWVGAATFGKWWP*ELGREFTGGCWGVA
Trigger: TGCAACTCCCCAGCAACCCCCTGTAAATTCCCTGCCCAGCTCTCACGGCCACCACTTCCCAAATGTGGCTGCGCCAACCCAGACATCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CCA 90 bp GGAGTGGATCCATTGCATCTGACTGAGAAGCAGGGCGAGGAGTCCTaGGCTGCAGCTCTGGATTGGGGCCTGGTGCCATCATGGAAGATG +
Preference number: 5 (lower is better)
Translates to: GVDPLHLTEKQGEES*AAALDWGLVPSWKM
Trigger: CATCTTCCATGATGGCACCAGGCCCCAATCCAGAGCTGCAGCCCAGGACTCCTCGCCCTGCTTCTCAGTCAGATGCAATGGATCCACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CCA 90 bp TCCAGAAGGCAGCTGGTTCCAGCCTGGAGGAACAGGCACCTGAGTTaGGGCAGTAAACTGGGGTCGAATTCCCTGTGGCTGTTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: SRRQLVPAWRNRHLS*GSKLGSNSLWLLLL
Trigger: CAGCAGCAACAGCCACAGGGAATTCGACCCCAGTTTACTGCCCCAACTCAGGTGCCTGTTCCTCCAGGCTGGAACCAGCTGCCTTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CCA 90 bp AGTTGCTGTTGCATTGGGCCGGGCAAGGGAGCCTTCTTCCACCCTTaGTTTGCAGTCATTGTGCCCAGAGAACCCTGGGCTGGAGGAGGT +
Preference number: 5 (lower is better)
Translates to: SCCCIGPGKGAFFHP*FAVIVPREPWAGGG
Trigger: ACCTCCTCCAGCCCAGGGTTCTCTGGGCACAATGACTGCAAACCAAGGGTGGAAGAAGGCTCCCTTGCCCGGCCCAATGCAACAGCAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS TCA 90 bp TCAGCTGAGATGGTGGGCCCTGCTGGGGCTGGCCTTGCATGTTGCTaGGGTTCACTTGAGGAACCCCAGAAGTACCAGCCTGCTGATTGT +
Preference number: 5 (lower is better)
Translates to: SAEMVGPAGAGLACC*GSLEEPQKYQPADC
Trigger: ACAATCAGCAGGCTGGTACTTCTGGGGTTCCTCAAGTGAACCTCAGCAACATGCAAGGCCAGCCCCAGCAGGGCCCACCATCTCAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS GCA 90 bp CAATCTGAACGGAGAGAATCCCTAAATCCCGAAGCTGCTGGTTGTTaGTCTGAGCAAGGATCCGTAGCCGCTCCGCTGCTTCCCGGGGGA +
Preference number: 5 (lower is better)
Translates to: QSERRESLNPEAAGC*SEQGSVAAPLLPGG
Trigger: TCCCCCGGGAAGCAGCGGAGCGGCTACGGATCCTTGCTCAGAGCAACAACCAGCAGCTTCGGGATTTAGGGATTCTCTCCGTTCAGATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS TCA 90 bp CCTGGGCTGCAGCTCTGGATTGGGGCCTGGTGCCATCATGGAAGATaGCACATTTCCACCCGGGGGTATCATAACAGTGGCAGGGTTGTT +
Preference number: 5 (lower is better)
Translates to: PGLQLWIGAWCHHGR*HISTRGYHNSGRVV
Trigger: AACAACCCTGCCACTGTTATGATACCCCCGGGTGGAAATGTGTCATCTTCCATGATGGCACCAGGCCCCAATCCAGAGCTGCAGCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS TCA 90 bp TCCTCCACTAGGCCACCCGCAAGTGACTCAGATGCTATGCCACCATaGTTGCTTTTTGTGGTCGGTACGGCGGAGATGAGCTCGGAGGGT +
Preference number: 5 (lower is better)
Translates to: SSTRPPASDSDAMPP*LLFVVGTAEMSSEG
Trigger: ACCCTCCGAGCTCATCTCCGCCGTACCGACCACAAAAAGCAATCATGGTGGCATAGCATCTGAGTCACTTGCGGGTGGCCTAGTGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS GCA 90 bp GATAAACTGACATCGTTATTTGCTGTAGTAGCAGGATCACCATGCTaGTGGGCCATGTGTGGGCTGGGCCCTGGTGGCCGCAGGACCTGT +
Preference number: 5 (lower is better)
Translates to: DKLTSLFAVVAGSPC*WAMCGLGPGGRRTC
Trigger: ACAGGTCCTGCGGCCACCAGGGCCCAGCCCACACATGGCCCAGCAGCATGGTGATCCTGCTACTACAGCAAATAACGATGTCAGTTTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS TCA 90 bp AGAAGACGTACAAGGAGGGGAAGGAAGCTGAACAGGGGTGGCTCGTaGGCTAAGGACCAAAGGTCGACCTGTCTGGATGTTTGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: RRRTRRGRKLNRGGS*AKDQRSTCLDVWSR
Trigger: CCTGCTCCAAACATCCAGACAGGTCGACCTTTGGTCCTTAGCTCACGAGCCACCCCTGTTCAGCTTCCTTCCCCTCCTTGTACGTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS GCA 90 bp GGCATTCTTTGTTTATCAGGTGATGGTGGCACGGAGGCAGGTCCTTaGAGACTGACCATGACAGGCACACTGCCACTCTGTTGCATGGGC +
Preference number: 5 (lower is better)
Translates to: GILCLSGDGGTEAGP*RLTMTGTLPLCCMG
Trigger: GCCCATGCAACAGAGTGGCAGTGTGCCTGTCATGGTCAGTCTGCAAGGACCTGCCTCCGTGCCACCATCACCTGATAAACAAAGAATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CCA 90 bp ATTCCGACCCGGAGAGCTGACAGGCTGCTGAAATCCCTGGGGAAGTaGGTTATTTTGAGGTGGCCTTGGTCCCATCTGCTGCTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: IPTRRADRLLKSLGK*VILRWPWSHLLLSL
Trigger: CAAACTCAGCAGCAGATGGGACCAAGGCCACCTCAAAATAACCCACTTCCCCAGGGATTTCAGCAGCCTGTCAGCTCTCCGGGTCGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CCA 90 bp GTTCATGTTGCCATGAATTCCCATGAGGCTGGGCTGCATCATATTTaGCGGCCCGTGGGACACCTGCATCTGGTTTTGAGGAGGACCAGC +
Preference number: 5 (lower is better)
Translates to: VHVAMNSHEAGLHHI*RPVGHLHLVLRRTS
Trigger: GCTGGTCCTCCTCAAAACCAGATGCAGGTGTCCCACGGGCCGCCAAATATGATGCAGCCCAGCCTCATGGGAATTCATGGCAACATGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CCA 90 bp TGGGGGTGCCACATGCTGCATGAGTTGAGGAGGCATCTGCTGAAGTaGCCTCTGTTCAACTGGTTGAGAAGGATAACCTGGTGGCCGGTT +
Preference number: 5 (lower is better)
Translates to: WGCHMLHELRRHLLK*PLFNWLRRITWWPV
Trigger: AACCGGCCACCAGGTTATCCTTCTCAACCAGTTGAACAGAGGCCACTTCAGCAGATGCCTCCTCAACTCATGCAGCATGTGGCACCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CCA 90 bp TGCCACTTGCTTCAGGGAGTGAGGCCATCTCCGCCAGTGGCGAGCTaGAAGGATTCTGCGGGCTCTCCTGATAGACCATTTTCCTTGAAT +
Preference number: 5 (lower is better)
Translates to: CHLLQGVRPSPPVAS*KDSAGSPDRPFSLN
Trigger: ATTCAAGGAAAATGGTCTATCAGGAGAGCCCGCAGAATCCTTCCAGCTCGCCACTGGCGGAGATGGCCTCACTCCCTGAAGCAAGTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCGAGGCAGGAGACTTGTaGGTGAGGTGGGGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: NLELQLATPKGLNSPAFPEAGDL*VRWGCC
Trigger: GCAGCAGCCCCACCTCACCAACAAGTCTCCTGCCTC...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS TCA 90 bp ATTGGGAGCTCCACTGAAAGGTGCATTGAAAGACATCCCATGGCCTaGGAAGTGGTTTCCCGAGGCACTGTTTCCCTGCATGGCCTGCAC +
Preference number: 5 (lower is better)
Translates to: IGSSTERCIERHPMA*EVVSRGTVSLHGLH
Trigger: GTGCAGGCCATGCAGGGAAACAGTGCCTCGGGAAACCACTTCTCAGGCCATGGGATGTCTTTCAATGCACCTTTCAGTGGAGCTCCCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CCA 90 bp TGGCCCCTGGTTTGGTGGTTGCTGCTGCATCACCATGAAGTTAGGTaGCACATTTCCCTGTTGAACCATAGGATTCCGACCCGGAGAGCT +
Preference number: 5 (lower is better)
Translates to: WPLVWWLLLHHHEVR*HISLLNHRIPTRRA
Trigger: AGCTCTCCGGGTCGGAATCCTATGGTTCAACAGGGAAATGTGCCACCTAACTTCATGGTGATGCAGCAGCAACCACCAAACCAGGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CCA 90 bp GTTGTTGGGTGTCTGAGGATAATAGGGTCTGGGGCTGGCTCTGTTTaGTGTTTTGGGCCTAGATGTCTGGGTTGGCGCAGCCACATTTGG +
Preference number: 5 (lower is better)
Translates to: VVGCLRIIGSGAGSV*CFGPRCLGWRSHIW
Trigger: CCAAATGTGGCTGCGCCAACCCAGACATCTAGGCCCAAAACACCAAACAGAGCCAGCCCCAGACCCTATTATCCTCAGACACCCAACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CCA 90 bp GTAAAGGGCCAACAACTGCAACAGAGGGAGGCATCAGGCCAGAGTTaGTTGTCAGTGGGGCTGCAGGAATTGTGCTTGGCTGTGATCCTT +
Preference number: 5 (lower is better)
Translates to: VKGQQLQQREASGQS*LSVGLQELCLAVIL
Trigger: AAGGATCACAGCCAAGCACAATTCCTGCAGCCCCACTGACAACCAACTCTGGCCTGATGCCTCCCTCTGTTGCAGTTGTTGGCCCTTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CCA 90 bp CCACGATGCCTTGAGGTTGAGACTGGGAGGTATGTTAAGGGAGCATaGAGCCAGCCATTCTGCAGATGGGGAAACTGGCACAGTGCTGAA +
Preference number: 5 (lower is better)
Translates to: PRCLEVETGRYVKGA*SQPFCRWGNWHSAE
Trigger: TTCAGCACTGTGCCAGTTTCCCCATCTGCAGAATGGCTGGCTCCATGCTCCCTTAACATACCTCCCAGTCTCAACCTCAAGGCATCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434040.5
ENST00000593786.1
CDS-3UTR CAA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCATGCCTGGAGTTGCTGTaGCATTGGGCCGGGCAAGGG +
Preference number: 5 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTACLELL*HWAGQG
Trigger: CCCTTGCCCGGCCCAATGCAACAGCAACTCCAGGCA...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGGAGGCAGGAGACTTGTaGGTGAGGTGGGGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIREAGDL*VRWGCC
Trigger: GCAGCAGCCCCACCTCACCAACAAGTCTCCTGCCTC...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCAGGGTGGGGTCATCCTTaGGGGCGAGGGCCCAAGATT +
Preference number: 5 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAGWGHP*GRGPKI
Trigger: AATCTTGGGCCCTCGCCCCAAAGGATGACCCCACCC...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCGTTGTTCACAGGCCCTaGCTGGGGCAGCATCTGTCC +
Preference number: 5 (lower is better)
Translates to: NLELQLATPKGLNSPAFPVVHRP*LGQHLS
Trigger: GGACAGATGCTGCCCCAGCAAGGGCCTGTGAACAAC...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS TCA 90 bp ATGCTATGCCACCATGATTGCTTTTTGTGGTCGGTACGGCGGAGATaGGCTCGGAGGGTACCAGAGTGGTTACTATCGAGCGTACACTGG +
Preference number: 5 (lower is better)
Translates to: MLCHHDCFLWSVRRR*ARRVPEWLLSSVHW
Trigger: CCAGTGTACGCTCGATAGTAACCACTCTGGTACCCTCCGAGCTCATCTCCGCCGTACCGACCACAAAAAGCAATCATGGTGGCATAGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CCA 90 bp AAACTGGGGTCGAATTCCCTGTGGCTGTTGCTGCTGATGTTGCTGTaGGGGTCTTGCCTGCAACTGTTGTTGCTGCTGTTGCTGTTGTTG +
Preference number: 5 (lower is better)
Translates to: KLGSNSLWLLLLMLL*GSCLQLLLLLLLLL
Trigger: CAACAACAGCAACAGCAGCAACAACAGTTGCAGGCAAGACCCCCACAGCAACATCAGCAGCAACAGCCACAGGGAATTCGACCCCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CCA 90 bp CGTTTAGGCATTCCTCCTAGGCCTGGATGTAAACTCTGTGGCCCCTaGTTTGGTGGTTGCTGCTGCATCACCATGAAGTTAGGTGGCACA +
Preference number: 5 (lower is better)
Translates to: RLGIPPRPGCKLCGP*FGGCCCITMKLGGT
Trigger: TGTGCCACCTAACTTCATGGTGATGCAGCAGCAACCACCAAACCAGGGGCCACAGAGTTTACATCCAGGCCTAGGAGGAATGCCTAAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CCA 90 bp TTTCCATTGGGAGCTCCACTGAAAGGTGCATTGAAAGACATCCCATaGCCTGAGAAGTGGTTTCCCGAGGCACTGTTTCCCTGCATGGCC +
Preference number: 5 (lower is better)
Translates to: FPLGAPLKGALKDIP*PEKWFPEALFPCMA
Trigger: GGCCATGCAGGGAAACAGTGCCTCGGGAAACCACTTCTCAGGCCATGGGATGTCTTTCAATGCACCTTTCAGTGGAGCTCCCAATGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CCA 90 bp CATTTACCTCCAGCTCTGGTCTGGCAACAGAGGCCTGCAGTGCTGTaGTTGAAGTTTCCTTTGAGACTAAATTCTGCGACGGGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: HLPPALVWQQRPAVL*LKFPLRLNSATGLV
Trigger: CACCAGCCCCGTCGCAGAATTTAGTCTCAAAGGAAACTTCAACCACAGCACTGCAGGCCTCTGTTGCCAGACCAGAGCTGGAGGTAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612493.4
ENST00000628752.2
CDS-3UTR CAA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCTCTGTGGCCCCTGGTTaGGTGGTTGCTGCTGCATCA +
Preference number: 5 (lower is better)
Translates to: NLELQLATPKGLNSPAFPSVAPG*VVAAAS
Trigger: TGATGCAGCAGCAACCACCAAACCAGGGGCCACAGA...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGTGGGCTGCATCATATTaGGCGGCCCGTGGGACACCT +
Preference number: 5 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRWAASY*AARGTP
Trigger: AGGTGTCCCACGGGCCGCCAAATATGATGCAGCCCA...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGTTGGCGCAGCCACATTaGGGAAGTGGTGGCCGTGAG +
Preference number: 5 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRLAQPH*GSGGRE
Trigger: CTCACGGCCACCACTTCCCAAATGTGGCTGCGCCAA...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCATTGGCGCAGCCACATTaGGGAAGTGGTGGCCGTGAG +
Preference number: 5 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTALAQPH*GSGGRE
Trigger: CTCACGGCCACCACTTCCCAAATGTGGCTGCGCCAA...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS TCA 90 bp CCTGAGTTATCCAAGTTAATTCCTTGTTCTCCAGGCAACGGTGGCTaGTCAGCCTCTTCCAGACCAGCTGGGCGAGTATCTGGGGTGTTT +
Preference number: 5 (lower is better)
Translates to: PELSKLIPCSPGNGG*SASSRPAGRVSGVF
Trigger: AAACACCCCAGATACTCGCCCAGCTGGTCTGGAAGAGGCTGATCAGCCACCGTTGCCTGGAGAACAAGGAATTAACTTGGATAACTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
ENST00000628752.2
CDS TCA 90 bp TCCCAAGGGAGTATTCACAGGCATTGGCATTCTTTGTTTATCAGGTaGTGGTGGCACGGAGGCAGGTCCTTGCAGACTGACCATGACAGG +
Preference number: 5 (lower is better)
Translates to: SQGSIHRHWHSLFIR*WWHGGRSLQTDHDR
Trigger: CCTGTCATGGTCAGTCTGCAAGGACCTGCCTCCGTGCCACCATCACCTGATAAACAAAGAATGCCAATGCCTGTGAATACTCCCTTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS TCA 90 bp TCCTCAACAACACCCCCAACTGCAGCCACAGACACAGTAGAATTCTaGGGATTCAGCCCACTGTTGTTAGGAAAGCTCCCAGGTACAGGG +
Preference number: 5 (lower is better)
Translates to: SSTTPPTAATDTVEF*GFSPLLLGKLPGTG
Trigger: CCCTGTACCTGGGAGCTTTCCTAACAACAGTGGGCTGAATCCTCAGAATTCTACTGTGTCTGTGGCTGCAGTTGGGGGTGTTGTTGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS GCA 90 bp TGCTGCTGCTGCTGCTGCTGCTGTTGTTGTTGTTGCTGCTGCTGCTaGAGCTGGGGAAAATTAGCTGGGTTCATTTGTCTGTTCACAGAG +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*SWGKLAGFICLFTE
Trigger: CTCTGTGAACAGACAAATGAACCCAGCTAATTTTCCCCAGCTGCAGCAGCAGCAGCAACAACAACAACAGCAGCAGCAGCAGCAGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS GCA 90 bp TGCTGCTGCTGCTGCTGCTGCTGCTGTTGTTGTTGTTGCTGCTGCTaGTGCAGCTGGGGAAAATTAGCTGGGTTCATTTGTCTGTTCACA +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CSWGKLAGFICLFT
Trigger: TGTGAACAGACAAATGAACCCAGCTAATTTTCCCCAGCTGCAGCAGCAGCAGCAACAACAACAACAGCAGCAGCAGCAGCAGCAGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS GCA 90 bp TGTTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTTGTTGTTGCTGCTaGTGCTGCAGCTGGGGAAAATTAGCTGGGTTCATTTGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CCSWGKLAGFICLF
Trigger: GAACAGACAAATGAACCCAGCTAATTTTCCCCAGCTGCAGCAGCAGCAGCAACAACAACAACAGCAGCAGCAGCAGCAGCAGCAGCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS GCA 90 bp TGTTGTTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTTGTTGTTGCTaGTGCTGCTGCAGCTGGGGAAAATTAGCTGGGTTCATTTGTCTG +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CCCSWGKLAGFICL
Trigger: CAGACAAATGAACCCAGCTAATTTTCCCCAGCTGCAGCAGCAGCAGCAACAACAACAACAGCAGCAGCAGCAGCAGCAGCAGCAACAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS GCA 90 bp TGCTGTTGTTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTTGTTGTTaGTGCTGCTGCTGCAGCTGGGGAAAATTAGCTGGGTTCATTTGT +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CCCCSWGKLAGFIC
Trigger: ACAAATGAACCCAGCTAATTTTCCCCAGCTGCAGCAGCAGCAGCAACAACAACAACAGCAGCAGCAGCAGCAGCAGCAGCAACAACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS GCA 90 bp AGCATCTGTCCTGACATCTGTCCCGTAAACTGCACCATATTTCCTTaGATGTTTGGAGTTGGTCCCCTCATTATCTGGGCTGGTCCCGGC +
Preference number: 5 (lower is better)
Translates to: SICPDICPVNCTIFP*MFGVGPLIIWAGPG
Trigger: GCCGGGACCAGCCCAGATAATGAGGGGACCAACTCCAAACATGCAAGGAAATATGGTGCAGTTTACGGGACAGATGTCAGGACAGATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CCA 90 bp TGCTGCTGCTGCTGCTGTTGTTGTTGTTGCTGCTGCTGCTGCAGCTaGGGAAAATTAGCTGGGTTCATTTGTCTGTTCACAGAGACAGGC +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCS*GKLAGFICLFTETG
Trigger: GCCTGTCTCTGTGAACAGACAAATGAACCCAGCTAATTTTCCCCAGCTGCAGCAGCAGCAGCAACAACAACAACAGCAGCAGCAGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CCA 90 bp CATTTACCTCCAGCTCTGGTCTGGCAACAGAGGCCTGCAGTGCTGTaGTTGAAGTTTCCTTTGAGACTAAATTCTGCGACGGGGCTATGC +
Preference number: 5 (lower is better)
Translates to: HLPPALVWQQRPAVL*LKFPLRLNSATGLC
Trigger: GCATAGCCCCGTCGCAGAATTTAGTCTCAAAGGAAACTTCAACCACAGCACTGCAGGCCTCTGTTGCCAGACCAGAGCTGGAGGTAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCGGCTGCAGCTCTGGATaGGGGCCTGGTGCCATCATG +
Preference number: 5 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFGCSSG*GPGAIM
Trigger: CATGATGGCACCAGGCCCCAATCCAGAGCTGCAGCC...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCGTTGCTGTGGGGGTCTaGCCTGCAACTGTTGTTGCT +
Preference number: 5 (lower is better)
Translates to: NLELQLATPKGLNSPAFPVAVGV*PATVVA
Trigger: AGCAACAACAGTTGCAGGCAAGACCCCCACAGCAAC...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTGGAGTTGCTGTTGCATaGGGCCGGGCAAGGGAGCCT +
Preference number: 5 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLGVAVA*GRAREP
Trigger: AGGCTCCCTTGCCCGGCCCAATGCAACAGCAACTCC...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTGAGGCAGGAGACTTGTaGGTGAGGTGGGGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLEAGDL*VRWGCC
Trigger: GCAGCAGCCCCACCTCACCAACAAGTCTCCTGCCTC...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCCCCCTGGTTTGGTGGTaGCTGCTGCATCACCATGAA +
Preference number: 5 (lower is better)
Translates to: NLELQLATPKGLNSPAFPPLVWW*LLHHHE
Trigger: TTCATGGTGATGCAGCAGCAACCACCAAACCAGGGG...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
52% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAATTCCCAGGGGTGGTaGCTGTGGTCGAAGGCACCT +
Preference number: 5 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRNSQGW*LWSKAP
Trigger: AGGTGCCTTCGACCACAGCAACCACCCCTGGGAATT...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCGTTCAAGGTTCCTTGTaGCTGGACCATCTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: NLELQLATPKGLNSPAFPVQGSL*LDHLAL
Trigger: CAGGGCCAGATGGTCCAGCAACAAGGAACCTTGAAC...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCGGGGTTGCTGGGGAGTaGCACCTTGAGTTGCTGAAA +
Preference number: 5 (lower is better)
Translates to: NLELQLATPKGLNSPAFPGVAGE*HLELLK
Trigger: TTTCAGCAACTCAAGGTGCAACTCCCCAGCAACCCC...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS TCA 90 bp AGATGGACTGTTGTTCACAGGCCCTTGCTGGGGCAGCATCTGTCCTaGCATCTGTCCCGTAAACTGCACCATATTTCCTTGCATGTTTGG +
Preference number: 5 (lower is better)
Translates to: RWTVVHRPLLGQHLS*HLSRKLHHISLHVW
Trigger: CCAAACATGCAAGGAAATATGGTGCAGTTTACGGGACAGATGTCAGGACAGATGCTGCCCCAGCAAGGGCCTGTGAACAACAGTCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS TCA 90 bp AAAGACAGGTGTAATGAACTGAGGCCGGGCATTAGACTGAGCAGCTaGCTGTCCCTCAGAAACCATAACCTTGCTACCCGCATTGGGCAT +
Preference number: 5 (lower is better)
Translates to: KDRCNELRPGIRLSS*LSLRNHNLATRIGH
Trigger: ATGCCCAATGCGGGTAGCAAGGTTATGGTTTCTGAGGGACAGTCAGCTGCTCAGTCTAATGCCCGGCCTCAGTTCATTACACCTGTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS GCA 90 bp TTGCTGACAGGGCCATTAAGCGCAGTTCACACAAACAAACCACGATaGCTTGAGGTTGAGACTGGGAGGTATGTTAAGGGAGCATGGAGC +
Preference number: 5 (lower is better)
Translates to: LLTGPLSAVHTNKPR*LEVETGRYVKGAWS
Trigger: GCTCCATGCTCCCTTAACATACCTCCCAGTCTCAACCTCAAGGCATCGTGGTTTGTTTGTGTGAACTGCGCTTAATGGCCCTGTCAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434040.5
ENST00000593786.1
CDS CCA 90 bp CATCTGTCCCGTAAACTGCACCATATTTCCTTGCATGTTTGGAGTTaGTCCCCTCATTATCTGGGCTGGTCCCGGCATGACATTGGACTG +
Preference number: 5 (lower is better)
Translates to: HLSRKLHHISLHVWS*SPHYLGWSRHDIGL
Trigger: CAGTCCAATGTCATGCCGGGACCAGCCCAGATAATGAGGGGACCAACTCCAAACATGCAAGGAAATATGGTGCAGTTTACGGGACAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS-3UTR CAA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCGGCTGCAGCTCTGGATaGGGGCCTGGTGCCATCATG +
Preference number: 5 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLGCSSG*GPGAIM
Trigger: CATGATGGCACCAGGCCCCAATCCAGAGCTGCAGCC...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCAGTTGCTGTGGGGGTCTaGCCTGCAACTGTTGTTGCT +
Preference number: 5 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAVAVGV*PATVVA
Trigger: AGCAACAACAGTTGCAGGCAAGACCCCCACAGCAAC...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGGGAGTTGCTGTTGCATaGGGCCGGGCAAGGGAGCCT +
Preference number: 5 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQGVAVA*GRAREP
Trigger: AGGCTCCCTTGCCCGGCCCAATGCAACAGCAACTCC...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCTATTTTGAGGTGGCCTaGGTCCCATCTGCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: NLELQLATPKGLNSPAFPYFEVA*VPSAAE
Trigger: CTCAGCAGCAGATGGGACCAAGGCCACCTCAAAATA...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCTGGGAGGGCACGATTaGCTGGTGCATGCCCATCAG +
Preference number: 5 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFLGGHD*LVHAHQ
Trigger: CTGATGGGCATGCACCAGCAAATCGTGCCCTCCCAG...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCGTTGTTCACAGGCCCTaGCTGGGGCAGCATCTGTCC +
Preference number: 5 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFVVHRP*LGQHLS
Trigger: GGACAGATGCTGCCCCAGCAAGGGCCTGTGAACAAC...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCAGAGTTGCACCTTGAGTaGCTGAAAGGGGCGATGGTC +
Preference number: 5 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAELHLE*LKGAMV
Trigger: GACCATCGCCCCTTTCAGCAACTCAAGGTGCAACTC...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGGGGGTTGCTGGGGAGTaGCACCTTGAGTTGCTGAAA +
Preference number: 5 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRGVAGE*HLELLK
Trigger: TTTCAGCAACTCAAGGTGCAACTCCCCAGCAACCCC...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCCTAGACCTGCGACTGTaGCTTGGACTTGCCCGTTTT +
Preference number: 5 (lower is better)
Translates to: NLELQLATPKGLNSPAFPLDLRL*LGLARF
Trigger: AAAACGGGCAAGTCCAAGCAACAGTCGCAGGTCTAG...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCCCAGGTACAGGGGGATaGGCCAGAGGAGTGGGACTG +
Preference number: 5 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLPGTGG*ARGVGL
Trigger: CAGTCCCACTCCTCTGGCCAATCCCCCTGTACCTGG...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCGAGGACCCTGGACTATaGGTCAAAAGGGGAGAAACC +
Preference number: 5 (lower is better)
Translates to: NLELQLATPKGLNSPAFPEDPGL*VKRGET
Trigger: GGTTTCTCCCCTTTTGACCAATAGTCCAGGGTCCTC...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTACTGGGCTTCGCCGGTaGCCAGAGGACCCTGGACTA +
Preference number: 5 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTTGLRR*PEDPGL
Trigger: TAGTCCAGGGTCCTCTGGCAACCGGCGAAGCCCAGT...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCTTTGGGCTCACTGCTTaGTCCAGAGACTATGGCAGC +
Preference number: 5 (lower is better)
Translates to: NLELQLATPKGLNSPAFPFGLTA*SRDYGS
Trigger: GCTGCCATAGTCTCTGGACAAAGCAGTGAGCCCAAA...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCCACTTTGTGGACTGCTaGAGCTCAGGAGTTCCAGAC +
Preference number: 5 (lower is better)
Translates to: NLELQLATPKGLNSPAFPHFVDC*SSGVPD
Trigger: GTCTGGAACTCCTGAGCTCAAGCAGTCCACAAAGTG...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS CCA 90 bp AGTGGTTTTCCTACTGGACCCAGGACTAGACCTGCGACTGTTGCTTaGACTTGCCCGTTTTGTTGCTCCAGAATTAGACTGCTTTCCAGA +
Preference number: 5 (lower is better)
Translates to: SGFPTGPRTRPATVA*TCPFCCSRIRLLSR
Trigger: TCTGGAAAGCAGTCTAATTCTGGAGCAACAAAACGGGCAAGTCCAAGCAACAGTCGCAGGTCTAGTCCTGGGTCCAGTAGGAAAACCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGGCTTCCCGGGGGATGTaGAATGTCACACGCACGCTG +
Preference number: 5 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQASRGM*NVTRTL
Trigger: CAGCGTGCGTGTGACATTCAACATCCCCCGGGAAGC...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTGGCTGCAGCTCTGGATaGGGGCCTGGTGCCATCATG +
Preference number: 5 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCGCSSG*GPGAIM
Trigger: CATGATGGCACCAGGCCCCAATCCAGAGCTGCAGCC...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTATGCCTGGAGTTGCTGTaGCATTGGGCCGGGCAAGGG +
Preference number: 5 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLCLELL*HWAGQG
Trigger: CCCTTGCCCGGCCCAATGCAACAGCAACTCCAGGCA...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCTGCATAAAGTTCGGATaGGCCTGTCCTGCTGAGAAG +
Preference number: 5 (lower is better)
Translates to: NLELQLATPKGLNSPAFPCIKFG*ACPAEK
Trigger: CTTCTCAGCAGGACAGGCCAATCCGAACTTTATGCA...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGCGAAGGCACCTGACCTaGCATAAAGTTCGGATTGGC +
Preference number: 5 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRRRHLT*HKVRIG
Trigger: GCCAATCCGAACTTTATGCAAGGTCAGGTGCCTTCG...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCAGCTGGACATTTTGATTaGCTTGCAGCTGAGGGGCTC +
Preference number: 5 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAAGHFD*LAAEGL
Trigger: GAGCCCCTCAGCTGCAAGCAAATCAAAATGTCCAGC...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGGAGGACCAGCTCCTaGACCACCTGCATGCTGGAC +
Preference number: 5 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHRRTSS*TTCMLD
Trigger: GTCCAGCATGCAGGTGGTCAAGGAGCTGGTCCTCCT...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTGGGCTGCATCATATTaGGCGGCCCGTGGGACACCT +
Preference number: 5 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTWAASY*AARGTP
Trigger: AGGTGTCCCACGGGCCGCCAAATATGATGCAGCCCA...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTGGGCTGCATCATATTaGGCGGCCCGTGGGACACCT +
Preference number: 5 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQWAASY*AARGTP
Trigger: AGGTGTCCCACGGGCCGCCAAATATGATGCAGCCCA...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCAGTTGCTGAGGTTCACTaGAGGAACCCCAGAAGTACC +
Preference number: 5 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAVAEVH*RNPRST
Trigger: GGTACTTCTGGGGTTCCTCAAGTGAACCTCAGCAAC...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGGTTGCTGAGGTTCACTaGAGGAACCCCAGAAGTACC +
Preference number: 5 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRVAEVH*RNPRST
Trigger: GGTACTTCTGGGGTTCCTCAAGTGAACCTCAGCAAC...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTAGGGTGGGGTCATCCTTaGGGGCGAGGGCCCAAGATT +
Preference number: 5 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLGWGHP*GRGPKI
Trigger: AATCTTGGGCCCTCGCCCCAAAGGATGACCCCACCC...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCTATCATTGGGTTCTGTaGGAGCAAAACCTGCCCCTG +
Preference number: 5 (lower is better)
Translates to: NLELQLATPKGLNSPAFPYHWVL*EQNLPL
Trigger: CAGGGGCAGGTTTTGCTCCAACAGAACCCAATGATA...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCGGAAGCCTAACTGATTaGGGATCCTGCTGCATCATG +
Preference number: 5 (lower is better)
Translates to: NLELQLATPKGLNSPAFPGSLTD*GSCCIM
Trigger: CATGATGCAGCAGGATCCCAAATCAGTTAGGCTTCC...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCGTGCTTCACTGCCACTaGCTTCAGGGAGTGAGGCCA +
Preference number: 5 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFVLHCH*LQGVRP
Trigger: TGGCCTCACTCCCTGAAGCAAGTGGCAGTGAAGCAC...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCGCTCTGTTTGGTGTTTaGGGCCTAGATGTCTGGGTT +
Preference number: 5 (lower is better)
Translates to: NLELQLATPKGLNSPAFPALFGV*GLDVWV
Trigger: AACCCAGACATCTAGGCCCAAAACACCAAACAGAGC...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGACCTGCGACTGTTGCTaGGACTTGCCCGTTTTGTTG +
Preference number: 5 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRTCDCC*DLPVLL
Trigger: CAACAAAACGGGCAAGTCCAAGCAACAGTCGCAGGT...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACTAGACCTGCGACTGTaGCTTGGACTTGCCCGTTTT +
Preference number: 5 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTALDLRL*LGLARF
Trigger: AAAACGGGCAAGTCCAAGCAACAGTCGCAGGTCTAG...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTCCAGGTACAGGGGGATaGGCCAGAGGAGTGGGACTG +
Preference number: 5 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCPGTGG*ARGVGL
Trigger: CAGTCCCACTCCTCTGGCCAATCCCCCTGTACCTGG...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGGAGGACCCTGGACTATaGGTCAAAAGGGGAGAAACC +
Preference number: 5 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIREDPGL*VKRGET
Trigger: GGTTTCTCCCCTTTTGACCAATAGTCCAGGGTCCTC...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACACCATGATTGCTTTTaGTGGTCGGTACGGCGGAGA +
Preference number: 5 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAHHDCF*WSVRRR
Trigger: TCTCCGCCGTACCGACCACAAAAAGCAATCATGGTG...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGTTTGGGCTCACTGCTTaGTCCAGAGACTATGGCAGC +
Preference number: 5 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRFGLTA*SRDYGS
Trigger: GCTGCCATAGTCTCTGGACAAAGCAGTGAGCCCAAA...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS TCA 90 bp TATTCCTGGACCACTTGCCATAGGAAATCCCGCCTCCATCCTAACTaGATTTCCAGCTCCCATGGGTCCATTCATTCTCACATCTTGGCT +
Preference number: 5 (lower is better)
Translates to: YSWTTCHRKSRLHPN*ISSSHGSIHSHILA
Trigger: AGCCAAGATGTGAGAATGAATGGACCCATGGGAGCTGGAAATTCAGTTAGGATGGAGGCGGGATTTCCTATGGCAAGTGGTCCAGGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS TCA 90 bp CTGGGAAGTTTGTTAGGATCCGAAGGCTGCCCATCCTTTTTGGACTaGTCTTCAGGGACAACCATTTTAACTTCTTGGGCAGGGACTGCT +
Preference number: 5 (lower is better)
Translates to: LGSLLGSEGCPSFLD*SSGTTILTSWAGTA
Trigger: AGCAGTCCCTGCCCAAGAAGTTAAAATGGTTGTCCCTGAAGATCAGTCCAAAAAGGATGGGCAGCCTTCGGATCCTAACAAACTTCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS GCA 90 bp CCCAGGACTAGACCTGCGACTGTTGCTTGGACTTGCCCGTTTTGTTaGTCCAGAATTAGACTGCTTTCCAGAATTCACTACCACAGAATC +
Preference number: 5 (lower is better)
Translates to: PRTRPATVAWTCPFC*SRIRLLSRIHYHRI
Trigger: GATTCTGTGGTAGTGAATTCTGGAAAGCAGTCTAATTCTGGAGCAACAAAACGGGCAAGTCCAAGCAACAGTCGCAGGTCTAGTCCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS GCA 90 bp TTTCCTACTGGACCCAGGACTAGACCTGCGACTGTTGCTTGGACTTaGCCGTTTTGTTGCTCCAGAATTAGACTGCTTTCCAGAATTCAC +
Preference number: 5 (lower is better)
Translates to: FPTGPRTRPATVAWT*PFCCSRIRLLSRIH
Trigger: GTGAATTCTGGAAAGCAGTCTAATTCTGGAGCAACAAAACGGGCAAGTCCAAGCAACAGTCGCAGGTCTAGTCCTGGGTCCAGTAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS GCA 90 bp AGGCACATTCAAGCTCTCCTTGTTATCCTCAACAACACCCCCAACTaGAGCCACAGACACAGTAGAATTCTGAGGATTCAGCCCACTGTT +
Preference number: 5 (lower is better)
Translates to: RHIQALLVILNNTPN*SHRHSRILRIQPTV
Trigger: AACAGTGGGCTGAATCCTCAGAATTCTACTGTGTCTGTGGCTGCAGTTGGGGGTGTTGTTGAGGATAACAAGGAGAGCTTGAATGTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS GCA 90 bp GCTCACAATTCTCTAAGTCAGAAGTCTAGGCACATCTGGGTTCTCTaGTTGGGATCCCACAAGTCTGAAATCAAGGTGTTGGCCAGGTGT +
Preference number: 5 (lower is better)
Translates to: AHNSLSQKSRHIWVL*LGSHKSEIKVLARC
Trigger: ACACCTGGCCAACACCTTGATTTCAGACTTGTGGGATCCCAAGCAGAGAACCCAGATGTGCCTAGACTTCTGACTTAGAGAATTGTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434040.5
CDS CCA 90 bp CATATTTCCTTGCATGTTTGGAGTTGGTCCCCTCATTATCTGGGCTaGTCCCGGCATGACATTGGACTGGTTCTGAGTGTTAAACTGCTG +
Preference number: 5 (lower is better)
Translates to: HISLHVWSWSPHYLG*SRHDIGLVLSVKLL
Trigger: CAGCAGTTTAACACTCAGAACCAGTCCAATGTCATGCCGGGACCAGCCCAGATAATGAGGGGACCAACTCCAAACATGCAAGGAAATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CCA 90 bp CCACAGTTGGCTCTTCAGTTCGGGAGTTTCTTCGGCCTGGGATTTTaGACTTTTCAACTATCTCTTTGGGCTCACTGCTTTGTCCAGAGA +
Preference number: 5 (lower is better)
Translates to: PQLALQFGSFFGLGF*TFQLSLWAHCFVQR
Trigger: TCTCTGGACAAAGCAGTGAGCCCAAAGAGATAGTTGAAAAGTCCAAAATCCCAGGCCGAAGAAACTCCCGAACTGAAGAGCCAACTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000471897.1
ENST00000612493.4
ENST00000628752.2
CDS CCA 90 bp TTCAGAGGCCACAGTTGGCTCTTCAGTTCGGGAGTTTCTTCGGCCTaGGATTTTGGACTTTTCAACTATCTCTTTGGGCTCACTGCTTTG +
Preference number: 5 (lower is better)
Translates to: FRGHSWLFSSGVSSA*DFGLFNYLFGLTAL
Trigger: CAAAGCAGTGAGCCCAAAGAGATAGTTGAAAAGTCCAAAATCCCAGGCCGAAGAAACTCCCGAACTGAAGAGCCAACTGTGGCCTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000471897.1
ENST00000612493.4
ENST00000628752.2
CDS CCA 90 bp TCTGGGTTCTCTGCTTGGGATCCCACAAGTCTGAAATCAAGGTGTTaGCCAGGTGTGTCCTCATATGGAGGCTTGACTAGAGAAAGATCA +
Preference number: 5 (lower is better)
Translates to: SGFSAWDPTSLKSRC*PGVSSYGGLTRERS
Trigger: TGATCTTTCTCTAGTCAAGCCTCCATATGAGGACACACCTGGCCAACACCTTGATTTCAGACTTGTGGGATCCCAAGCAGAGAACCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434040.5
CDS-3UTR CAA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTGCTTCCCGGGGGATGTaGAATGTCACACGCACGCTG +
Preference number: 5 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCASRGM*NVTRTL
Trigger: CAGCGTGCGTGTGACATTCAACATCCCCCGGGAAGC...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGAGGAGTGGATCCATaGCATCTGACTGAGAAGCAG +
Preference number: 5 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRRGVDP*HLTEKQ
Trigger: CTGCTTCTCAGTCAGATGCAATGGATCCACTCCTCT...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTCAGAGACAGGCTGCATaGGGTGATGTGGGGGAGCTA +
Preference number: 5 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTQRQAA*GDVGEL
Trigger: TAGCTCCCCCACATCACCCAATGCAGCCTGTCTCTG...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTGTTGCTGTGGGGGTCTaGCCTGCAACTGTTGTTGCT +
Preference number: 5 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLVAVGV*PATVVA
Trigger: AGCAACAACAGTTGCAGGCAAGACCCCCACAGCAAC...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCTCATCTGAGGAAAGTTaGTGTGGGCTTGTGAGGCTT +
Preference number: 5 (lower is better)
Translates to: NLELQLATPKGLNSPAFPSSEES*CGLVRL
Trigger: AAGCCTCACAAGCCCACACAAACTTTCCTCAGATGA...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCATGGCACATTTCCCTGTaGAACCATAGGATTCCGACC +
Preference number: 5 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAWHISL*NHRIPT
Trigger: GGTCGGAATCCTATGGTTCAACAGGGAAATGTGCCA...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCTGTGGCCCCTGGTTaGGTGGTTGCTGCTGCATCA +
Preference number: 5 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTSVAPG*VVAAAS
Trigger: TGATGCAGCAGCAACCACCAAACCAGGGGCCACAGA...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTCTGTGGCCCCTGGTTaGGTGGTTGCTGCTGCATCA +
Preference number: 5 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLSVAPG*VVAAAS
Trigger: TGATGCAGCAGCAACCACCAAACCAGGGGCCACAGA...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGAATTCCCAGGGGTGGTaGCTGTGGTCGAAGGCACCT +
Preference number: 5 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQNSQGW*LWSKAP
Trigger: AGGTGCCTTCGACCACAGCAACCACCCCTGGGAATT...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTAGGAGGACCAGCTCCTaGACCACCTGCATGCTGGAC +
Preference number: 5 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCRRTSS*TTCMLD
Trigger: GTCCAGCATGCAGGTGGTCAAGGAGCTGGTCCTCCT...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTCTGGGAGGGCACGATTaGCTGGTGCATGCCCATCAG +
Preference number: 5 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCLGGHD*LVHAHQ
Trigger: CTGATGGGCATGCACCAGCAAATCGTGCCCTCCCAG...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTACTGGGAGGGCACGATTaGCTGGTGCATGCCCATCAG +
Preference number: 5 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLLGGHD*LVHAHQ
Trigger: CTGATGGGCATGCACCAGCAAATCGTGCCCTCCCAG...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCAGGGTTCAAGGTTCCTaGTTGCTGGACCATCTGGCC +
Preference number: 5 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFRVQGS*LLDHLA
Trigger: GGCCAGATGGTCCAGCAACAAGGAACCTTGAACCCT...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCATGTGGCGCCATCATTaGTGGGCCCTGCTGGGAAAG +
Preference number: 5 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLMWRHH*WALLGK
Trigger: CTTTCCCAGCAGGGCCCACAAATGATGGCGCCACAT...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACATGTGGCGCCATCATTaGTGGGCCCTGCTGGGAAAG +
Preference number: 5 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHMWRHH*WALLGK
Trigger: CTTTCCCAGCAGGGCCCACAAATGATGGCGCCACAT...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCCTGCACCATATTTCCTaGCATGTTTGGAGTTGGTCC +
Preference number: 5 (lower is better)
Translates to: NLELQLATPKGLNSPAFPLHHIS*HVWSWS
Trigger: GGACCAACTCCAAACATGCAAGGAAATATGGTGCAG...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTGTTGTTCACAGGCCCTaGCTGGGGCAGCATCTGTCC +
Preference number: 5 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCVVHRP*LGQHLS
Trigger: GGACAGATGCTGCCCCAGCAAGGGCCTGTGAACAAC...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCATCCAAGTTAATTCCTaGTTCTCCAGGCAACGGTGG +
Preference number: 5 (lower is better)
Translates to: NLELQLATPKGLNSPAFPIQVNS*FSRQRW
Trigger: CCACCGTTGCCTGGAGAACAAGGAATTAACTTGGAT...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCGTGAAGGCATGTTGTTaGGGCCTCCTGGGACAGATG +
Preference number: 5 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFVKACC*GLLGQM
Trigger: CATCTGTCCCAGGAGGCCCAAACAACATGCCTTCAC...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGCAGACTGCAAGTGAGTaGGCAAAGCTGCTGATGTGT +
Preference number: 5 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRQTASE*AKLLMC
Trigger: ACACATCAGCAGCTTTGCCAACTCACTTGCAGTCTG...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCAACCTTGCTACCCGCATaGGGCATTGTGACAACTGTT +
Preference number: 5 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTATLLPA*GIVTTV
Trigger: AACAGTTGTCACAATGCCCAATGCGGGTAGCAAGGT...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCGTGGGGCTGCAGGAATaGTGCTTGGCTGTGATCCTT +
Preference number: 5 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFVGLQE*CLAVIL
Trigger: AAGGATCACAGCCAAGCACAATTCCTGCAGCCCCAC...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCAAAATCCAACCACAGGTaGCCAGTTTGCAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAKSNHR*PVCNLC
Trigger: GCAGAGGTTGCAAACTGGCAACCTGTGGTTGGATTT...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS TCA 90 bp TTTACCTGTTCCTTCCTACTCTGGGAATTCTGGCAATCACTGTCCTaGGGCACATTCAAGCTCTCCTTGTTATCCTCAACAACACCCCCA +
Preference number: 5 (lower is better)
Translates to: FTCSFLLWEFWQSLS*GTFKLSLLSSTTPP
Trigger: TGGGGGTGTTGTTGAGGATAACAAGGAGAGCTTGAATGTGCCTCAGGACAGTGATTGCCAGAATTCCCAGAGTAGGAAGGAACAGGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS TCA 90 bp GAGAGGGCATTAGGCGGTACAGGAGCAGAAGAAAATTTTATGTTCTaGGGTATGTGTAAAGGGCCAACAACTGCAACAGAGGGAGGCATC +
Preference number: 5 (lower is better)
Translates to: ERALGGTGAEENFMF*GMCKGPTTATEGGI
Trigger: GATGCCTCCCTCTGTTGCAGTTGTTGGCCCTTTACACATACCTCAGAACATAAAATTTTCTTCTGCTCCTGTACCGCCTAATGCCCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS TCA 90 bp AATTTCTCAGCTTCGAGATTCCCAGCCATGCAGGTGATGCAAATGTaGACGCCAGACTCATGGAGGGTAGGCATGTGGTTTCAAATTCTC +
Preference number: 5 (lower is better)
Translates to: NFSASRFPAMQVMQM*TPDSWRVGMWFQIL
Trigger: GAGAATTTGAAACCACATGCCTACCCTCCATGAGTCTGGCGTTCACATTTGCATCACCTGCATGGCTGGGAATCTCGAAGCTGAGAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626057.1
CDS CCA 90 bp AGATCGTTTACGATGTCCATTTTCCACACTTTCAGAGGCCACAGTTaGCTCTTCAGTTCGGGAGTTTCTTCGGCCTGGGATTTTGGACTT +
Preference number: 5 (lower is better)
Translates to: RSFTMSIFHTFRGHS*LFSSGVSSAWDFGL
Trigger: AAGTCCAAAATCCCAGGCCGAAGAAACTCCCGAACTGAAGAGCCAACTGTGGCCTCTGAAAGTGTGGAAAATGGACATCGTAAACGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000471897.1
ENST00000612493.4
ENST00000628752.2
CDS CCA 90 bp CTGTGCCCAGCAGGATTCTCACCCTACATGGTATGGAGACAAAGCTaGCACAGATACAACTTGGTTTGTTTGGGACATAAGACACTTGGT +
Preference number: 5 (lower is better)
Translates to: LCPAGFSPYMVWRQS*HRYNLVCLGHKTLG
Trigger: ACCAAGTGTCTTATGTCCCAAACAAACCAAGTTGTATCTGTGCCAGCTTTGTCTCCATACCATGTAGGGTGAGAATCCTGCTGGGCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471897.1
CDS CCA 90 bp TTTAGGCTAAAGTGTCCCTGTGCCCAGCAGGATTCTCACCCTACATaGTATGGAGACAAAGCTGGCACAGATACAACTTGGTTTGTTTGG +
Preference number: 5 (lower is better)
Translates to: FRLKCPCAQQDSHPT*YGDKAGTDTTWFVW
Trigger: CCAAACAAACCAAGTTGTATCTGTGCCAGCTTTGTCTCCATACCATGTAGGGTGAGAATCCTGCTGGGCACAGGGACACTTTAGCCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471897.1
CDS-3UTR CAA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCATTCATTCTCACATCTaGGCTTCGGTTCTGAGCCAA +
Preference number: 5 (lower is better)
Translates to: NLELQLATPKGLNSPAFPIHSHI*ASVLSQ
Trigger: TTGGCTCAGAACCGAAGCCAAGATGTGAGAATGAAT...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTACAGAGACAGGCTGCATaGGGTGATGTGGGGGAGCTA +
Preference number: 5 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLQRQAA*GDVGEL
Trigger: TAGCTCCCCCACATCACCCAATGCAGCCTGTCTCTG...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCATTAGCTGGGTTCATTaGTCTGTTCACAGAGACAGG +
Preference number: 5 (lower is better)
Translates to: NLELQLATPKGLNSPAFPISWVH*SVHRDR
Trigger: CCTGTCTCTGTGAACAGACAAATGAACCCAGCTAAT...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCAATTCCCTGTGGCTGTaGCTGCTGATGTTGCTGTGG +
Preference number: 5 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFNSLWL*LLMLLW
Trigger: CCACAGCAACATCAGCAGCAACAGCCACAGGGAATT...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCTGCCTGGAGTTGCTGTaGCATTGGGCCGGGCAAGGG +
Preference number: 5 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVCLELL*HWAGQG
Trigger: CCCTTGCCCGGCCCAATGCAACAGCAACTCCAGGCA...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGTCATCTGAGGAAAGTTaGTGTGGGCTTGTGAGGCTT +
Preference number: 5 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRSSEES*CGLVRL
Trigger: AAGCCTCACAAGCCCACACAAACTTTCCTCAGATGA...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTCATCTGCTGCTGAGTTaGGTTAACCGTTGGGGAGGA +
Preference number: 5 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLHLLLS*VNRWGG
Trigger: TCCTCCCCAACGGTTAACCAAACTCAGCAGCAGATG...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCGGGAAGTGGGTTATTTaGAGGTGGCCTTGGTCCCAT +
Preference number: 5 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFGKWVI*RWPWSH
Trigger: ATGGGACCAAGGCCACCTCAAAATAACCCACTTCCC...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCCCCCTGGTTTGGTGGTaGCTGCTGCATCACCATGAA +
Preference number: 5 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLPLVWW*LLHHHE
Trigger: TTCATGGTGATGCAGCAGCAACCACCAAACCAGGGG...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACCCCCTGGTTTGGTGGTaGCTGCTGCATCACCATGAA +
Preference number: 5 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHPLVWW*LLHHHE
Trigger: TTCATGGTGATGCAGCAGCAACCACCAAACCAGGGG...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTCGAAGGCACCTGACCTaGCATAAAGTTCGGATTGGC +
Preference number: 5 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLRRHLT*HKVRIG
Trigger: GCCAATCCGAACTTTATGCAAGGTCAGGTGCCTTCG...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTAATTCCCAGGGGTGGTaGCTGTGGTCGAAGGCACCT +
Preference number: 5 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCNSQGW*LWSKAP
Trigger: AGGTGCCTTCGACCACAGCAACCACCCCTGGGAATT...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCGCTGGACATTTTGATTaGCTTGCAGCTGAGGGGCTC +
Preference number: 5 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFAGHFD*LAAEGL
Trigger: GAGCCCCTCAGCTGCAAGCAAATCAAAATGTCCAGC...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCATGCATGCTGGACATTTaGATTTGCTTGCAGCTGAGG +
Preference number: 5 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTACMLDI*ICLQLR
Trigger: CCTCAGCTGCAAGCAAATCAAAATGTCCAGCATGCA...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGGTTCAAGGTTCCTTGTaGCTGGACCATCTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQVQGSL*LDHLAL
Trigger: CAGGGCCAGATGGTCCAGCAACAAGGAACCTTGAAC...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGGGTTCAAGGTTCCTaGTTGCTGGACCATCTGGCC +
Preference number: 5 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHRVQGS*LLDHLA
Trigger: GGCCAGATGGTCCAGCAACAAGGAACCTTGAACCCT...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCAGGGGACCATGTTGGTTaGTTGAATGCTAACATCAGG +
Preference number: 5 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAGDHVG*LNANIR
Trigger: CCTGATGTTAGCATTCAACAAACCAACATGGTCCCC...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGATCCAAGTTAATTCCTaGTTCTCCAGGCAACGGTGG +
Preference number: 5 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRIQVNS*FSRQRW
Trigger: CCACCGTTGCCTGGAGAACAAGGAATTAACTTGGAT...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTAGTGCTTCACTGCCACTaGCTTCAGGGAGTGAGGCCA +
Preference number: 5 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLVLHCH*LQGVRP
Trigger: TGGCCTCACTCCCTGAAGCAAGTGGCAGTGAAGCAC...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGGAGTTGCACCTTGAGTaGCTGAAAGGGGCGATGGTC +
Preference number: 5 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQELHLE*LKGAMV
Trigger: GACCATCGCCCCTTTCAGCAACTCAAGGTGCAACTC...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTGGAATTTACAGGGGGTaGCTGGGGAGTTGCACCTTG +
Preference number: 5 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTGIYRG*LGSCTL
Trigger: CAAGGTGCAACTCCCCAGCAACCCCCTGTAAATTCC...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCGGATTCAGCCCACTGTaGTTAGGAAAGCTCCCAGGT +
Preference number: 5 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFGFSPL*LGKLPG
Trigger: ACCTGGGAGCTTTCCTAACAACAGTGGGCTGAATCC...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCTCGACACTGGGAAGTTaGTTAGGATCCGAAGGCTGC +
Preference number: 5 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFSTLGS*LGSEGC
Trigger: GCAGCCTTCGGATCCTAACAAACTTCCCAGTGTCGA...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCATCAGAAACCATAACCTaGCTACCCGCATTGGGCATT +
Preference number: 5 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTASETIT*LPALGI
Trigger: AATGCCCAATGCGGGTAGCAAGGTTATGGTTTCTGA...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCACTGGGCTTCGCCGGTaGCCAGAGGACCCTGGACTA +
Preference number: 5 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVTGLRR*PEDPGL
Trigger: TAGTCCAGGGTCCTCTGGCAACCGGCGAAGCCCAGT...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGCCTGCAGTGCTGTGGTaGAAGTTTCCTTTGAGACTA +
Preference number: 5 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRPAVLW*KFPLRL
Trigger: TAGTCTCAAAGGAAACTTCAACCACAGCACTGCAGG...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTTTGGGCTCACTGCTTaGTCCAGAGACTATGGCAGC +
Preference number: 5 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLFGLTA*SRDYGS
Trigger: GCTGCCATAGTCTCTGGACAAAGCAGTGAGCCCAAA...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCTTTCAGAGGCCACAGTaGGCTCTTCAGTTCGGGAGT +
Preference number: 5 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFFQRPQ*ALQFGS
Trigger: ACTCCCGAACTGAAGAGCCAACTGTGGCCTCTGAAA...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTTTCAGAGGCCACAGTaGGCTCTTCAGTTCGGGAGT +
Preference number: 5 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLFQRPQ*ALQFGS
Trigger: ACTCCCGAACTGAAGAGCCAACTGTGGCCTCTGAAA...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCATTTTCTTCGCTTGGATaGCACCGCACTGGTTATGTC +
Preference number: 5 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAFSSLG*HRTGYV
Trigger: GACATAACCAGTGCGGTGCAATCCAAGCGAAGAAAA...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGTTGGATTTTCTTCGCTaGGATTGCACCGCACTGGTT +
Preference number: 5 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRLDFLR*DCTALV
Trigger: AACCAGTGCGGTGCAATCCAAGCGAAGAAAATCCAA...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCGTCCTGCTTTCCCCATaGCACTTTATGAAACAGGTT +
Preference number: 5 (lower is better)
Translates to: NLELQLATPKGLNSPAFPVLLSP*HFMKQV
Trigger: AACCTGTTTCATAAAGTGCAATGGGGAAAGCAGGAC...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCTTCCAAATGAGAAGATaGCTTTTGCCCCCACTACTG +
Preference number: 5 (lower is better)
Translates to: NLELQLATPKGLNSPAFPFQMRR*LLPPLL
Trigger: CAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS TCA 90 bp GGGGGTTTAATTGTCACATTGGGAGCTCCAGAGTTGTCAAGAAGTTaGCTTAACGATGTTGGTGCTTCCCTCATAGCAGGAGACACCAAA +
Preference number: 5 (lower is better)
Translates to: GGLIVTLGAPELSRS*LNDVGASLIAGDTK
Trigger: TTTGGTGTCTCCTGCTATGAGGGAAGCACCAACATCGTTAAGTCAACTTCTTGACAACTCTGGAGCTCCCAATGTGACAATTAAACCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGATTCATTCTCACATCTaGGCTTCGGTTCTGAGCCAA +
Preference number: 5 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRIHSHI*ASVLSQ
Trigger: TTGGCTCAGAACCGAAGCCAAGATGTGAGAATGAAT...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCAGAGGAGTGGATCCATaGCATCTGACTGAGAAGCAG +
Preference number: 5 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFRGVDP*HLTEKQ
Trigger: CTGCTTCTCAGTCAGATGCAATGGATCCACTCCTCT...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGATTAGCTGGGTTCATTaGTCTGTTCACAGAGACAGG +
Preference number: 5 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRISWVH*SVHRDR
Trigger: CCTGTCTCTGTGAACAGACAAATGAACCCAGCTAAT...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAATTCCCTGTGGCTGTaGCTGCTGATGTTGCTGTGG +
Preference number: 5 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHNSLWL*LLMLLW
Trigger: CCACAGCAACATCAGCAGCAACAGCCACAGGGAATT...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCTTCCACCCTTGGTTaGCAGTCATTGTGCCCAGAG +
Preference number: 5 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTSSTLG*QSLCPE
Trigger: CTCTGGGCACAATGACTGCAAACCAAGGGTGGAAGA...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTCTTCCACCCTTGGTTaGCAGTCATTGTGCCCAGAG +
Preference number: 5 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLSSTLG*QSLCPE
Trigger: CTCTGGGCACAATGACTGCAAACCAAGGGTGGAAGA...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACCATCTGCTGCTGAGTTaGGTTAACCGTTGGGGAGGA +
Preference number: 5 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHHLLLS*VNRWGG
Trigger: TCCTCCCCAACGGTTAACCAAACTCAGCAGCAGATG...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTCATCTGCTGCTGAGTTaGGTTAACCGTTGGGGAGGA +
Preference number: 5 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTHLLLS*VNRWGG
Trigger: TCCTCCCCAACGGTTAACCAAACTCAGCAGCAGATG...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTATTTTGAGGTGGCCTaGGTCCCATCTGCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQYFEVA*VPSAAE
Trigger: CTCAGCAGCAGATGGGACCAAGGCCACCTCAAAATA...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTATTTTGAGGTGGCCTaGGTCCCATCTGCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLYFEVA*VPSAAE
Trigger: CTCAGCAGCAGATGGGACCAAGGCCACCTCAAAATA...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGGGGAAGTGGGTTATTTaGAGGTGGCCTTGGTCCCAT +
Preference number: 5 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQGKWVI*RWPWSH
Trigger: ATGGGACCAAGGCCACCTCAAAATAACCCACTTCCC...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCTGGCACATTTCCCTGTaGAACCATAGGATTCCGACC +
Preference number: 5 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFWHISL*NHRIPT
Trigger: GGTCGGAATCCTATGGTTCAACAGGGAAATGTGCCA...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCTGCATAAAGTTCGGATaGGCCTGTCCTGCTGAGAAG +
Preference number: 5 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFCIKFG*ACPAEK
Trigger: CTTCTCAGCAGGACAGGCCAATCCGAACTTTATGCA...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTGCATAAAGTTCGGATaGGCCTGTCCTGCTGAGAAG +
Preference number: 5 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLCIKFG*ACPAEK
Trigger: CTTCTCAGCAGGACAGGCCAATCCGAACTTTATGCA...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGCGAAGGCACCTGACCTaGCATAAAGTTCGGATTGGC +
Preference number: 5 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQRRHLT*HKVRIG
Trigger: GCCAATCCGAACTTTATGCAAGGTCAGGTGCCTTCG...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCAGGAGGACCAGCTCCTaGACCACCTGCATGCTGGAC +
Preference number: 5 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVRRTSS*TTCMLD
Trigger: GTCCAGCATGCAGGTGGTCAAGGAGCTGGTCCTCCT...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCTATTTCCTTGCATGTTaGGAGTTGGTCCCCTCATTA +
Preference number: 5 (lower is better)
Translates to: NLELQLATPKGLNSPAFPYFLAC*ELVPSL
Trigger: TAATGAGGGGACCAACTCCAAACATGCAAGGAAATA...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCATCACTCTGCAATAAGTaGACCAACAATGGGCTCGTT +
Preference number: 5 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTASLCNK*TNNGLV
Trigger: AACGAGCCCATTGTTGGTCAACTTATTGCAGAGTGA...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTCACATGCTGCATGAGTaGAGGAGGCATCTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTHMLHE*RRHLLK
Trigger: CTTCAGCAGATGCCTCCTCAACTCATGCAGCATGTG...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACCACATGCTGCATGAGTaGAGGAGGCATCTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHHMLHE*RRHLLK
Trigger: CTTCAGCAGATGCCTCCTCAACTCATGCAGCATGTG...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTCATCATCATCATTTGTaGCTGCTGCTGCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLHHHHL*LLLLLL
Trigger: CAGCAGCAGCAGCAGCAGCAACAAATGATGATGATG...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTAGTGAAGGCATGTTGTTaGGGCCTCCTGGGACAGATG +
Preference number: 5 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLVKACC*GLLGQM
Trigger: CATCTGTCCCAGGAGGCCCAAACAACATGCCTTCAC...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTACATGTGAAGGCATGTaGTTTGGGCCTCCTGGGACA +
Preference number: 5 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTTCEGM*FGPPGT
Trigger: TGTCCCAGGAGGCCCAAACAACATGCCTTCACATGT...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCGCGATGGTCCAGGTTTaGGCCCTGTCATCATTAACT +
Preference number: 5 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFAMVQV*ALSSLT
Trigger: AGTTAATGATGACAGGGCCAAAACCTGGACCATCGC...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTAGGAATTTACAGGGGGTaGCTGGGGAGTTGCACCTTG +
Preference number: 5 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLGIYRG*LGSCTL
Trigger: CAAGGTGCAACTCCCCAGCAACCCCCTGTAAATTCC...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACACCTGCGACTGTTGCTaGGACTTGCCCGTTTTGTTG +
Preference number: 5 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHTCDCC*DLPVLL
Trigger: CAACAAAACGGGCAAGTCCAAGCAACAGTCGCAGGT...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTTTTGCCTCCCAGGGCTaGGAGTGGTTTTCCTACTGG +
Preference number: 5 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCFASQG*EWFSYW
Trigger: CCAGTAGGAAAACCACTCCAAGCCCTGGGAGGCAAA...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTATTTGCCTCCCAGGGCTaGGAGTGGTTTTCCTACTGG +
Preference number: 5 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLFASQG*EWFSYW
Trigger: CCAGTAGGAAAACCACTCCAAGCCCTGGGAGGCAAA...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGGGAGACACCAAATTTTaGTTCTCTTCGACACTGGGA +
Preference number: 5 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRGDTKF*FSSTLG
Trigger: TCCCAGTGTCGAAGAGAACAAAAATTTGGTGTCTCC...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCCACCATGATTGCTTTTaGTGGTCGGTACGGCGGAGA +
Preference number: 5 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLHHDCF*WSVRRR
Trigger: TCTCCGCCGTACCGACCACAAAAAGCAATCATGGTG...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGGTCCTGCTTTCCCCATaGCACTTTATGAAACAGGTT +
Preference number: 5 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRVLLSP*HFMKQV
Trigger: AACCTGTTTCATAAAGTGCAATGGGGAAAGCAGGAC...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGTTCCAAATGAGAAGATaGCTTTTGCCCCCACTACTG +
Preference number: 5 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRFQMRR*LLPPLL
Trigger: CAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGGCAAGAGAATCACTaGAACCTGGGAGACGGAGGT +
Preference number: 5 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHRQENH*NLGDGG
Trigger: ACCTCCGTCTCCCAGGTTCAAGTGATTCTCTTGCCT...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS CCA 90 bp TATAAATATTCAGGGGTCTGTGTTATGCTGCAGGTACACAGAGCATaGGTAATCCAGCCCAAAGGGCAGAGCCAAGACGTTTATTCATTC +
Preference number: 5 (lower is better)
Translates to: YKYSGVCVMLQVHRA*VIQPKGQSQDVYSF
Trigger: GAATGAATAAACGTCTTGGCTCTGCCCTTTGGGCTGGATTACCCATGCTCTGTGTACCTGCAGCATAACACAGACCCCTGAATATTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS-3UTR CAA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTAGAGGAGTGGATCCATaGCATCTGACTGAGAAGCAG +
Preference number: 5 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTRGVDP*HLTEKQ
Trigger: CTGCTTCTCAGTCAGATGCAATGGATCCACTCCTCT...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTAATTCCCTGTGGCTGTaGCTGCTGATGTTGCTGTGG +
Preference number: 5 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCNSLWL*LLMLLW
Trigger: CCACAGCAACATCAGCAGCAACAGCCACAGGGAATT...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTTGGCTAAGGATGGTCTaGCCTGGAGTTGCTGTTGCA +
Preference number: 5 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCWLRMV*PGVAVA
Trigger: TGCAACAGCAACTCCAGGCAAGACCATCCTTAGCCA...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTGGCACATTTCCCTGTaGAACCATAGGATTCCGACC +
Preference number: 5 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTWHISL*NHRIPT
Trigger: GGTCGGAATCCTATGGTTCAACAGGGAAATGTGCCA...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTAGCTGGACATTTTGATTaGCTTGCAGCTGAGGGGCTC +
Preference number: 5 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLAGHFD*LAAEGL
Trigger: GAGCCCCTCAGCTGCAAGCAAATCAAAATGTCCAGC...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTAGTTGCTGAGGTTCACTaGAGGAACCCCAGAAGTACC +
Preference number: 5 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLVAEVH*RNPRST
Trigger: GGTACTTCTGGGGTTCCTCAAGTGAACCTCAGCAAC...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTATCATTGGGTTCTGTaGGAGCAAAACCTGCCCCTG +
Preference number: 5 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQYHWVL*EQNLPL
Trigger: CAGGGGCAGGTTTTGCTCCAACAGAACCCAATGATA...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCATATTTCCTTGCATGTTaGGAGTTGGTCCCCTCATTA +
Preference number: 5 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAYFLAC*ELVPSL
Trigger: TAATGAGGGGACCAACTCCAAACATGCAAGGAAATA...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTCTGCACCATATTTCCTaGCATGTTTGGAGTTGGTCC +
Preference number: 5 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLLHHIS*HVWSWS
Trigger: GGACCAACTCCAAACATGCAAGGAAATATGGTGCAG...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCCCACTGAAAGGTGCATaGAAAGACATCCCATGGCCT +
Preference number: 5 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLPLKGA*KDIPWP
Trigger: AGGCCATGGGATGTCTTTCAATGCACCTTTCAGTGG...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTCCACTGAAAGGTGCATaGAAAGACATCCCATGGCCT +
Preference number: 5 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTPLKGA*KDIPWP
Trigger: AGGCCATGGGATGTCTTTCAATGCACCTTTCAGTGG...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCTGGGAAGCCTGGATTTaGACCACAGGACATCTGATT +
Preference number: 5 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFWEAWI*TTGHLI
Trigger: AATCAGATGTCCTGTGGTCAAAATCCAGGCTTCCCA...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACCCTCTGTTCAACTGGTaGAGAAGGATAACCTGGTGG +
Preference number: 5 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHPLFNW*RRITWW
Trigger: CCACCAGGTTATCCTTCTCAACCAGTTGAACAGAGG...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGCCTCTGTTCAACTGGTaGAGAAGGATAACCTGGTGG +
Preference number: 5 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQPLFNW*RRITWW
Trigger: CCACCAGGTTATCCTTCTCAACCAGTTGAACAGAGG...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACCATCATCATCATTTGTaGCTGCTGCTGCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHHHHHL*LLLLLL
Trigger: CAGCAGCAGCAGCAGCAGCAACAAATGATGATGATG...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACGGAAGCCTAACTGATTaGGGATCCTGCTGCATCATG +
Preference number: 5 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHGSLTD*GSCCIM
Trigger: CATGATGCAGCAGGATCCCAAATCAGTTAGGCTTCC...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCCCTGCTATGGAGGCATaGAGTCTTTCTGGTGACAGA +
Preference number: 5 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLPAMEA*SLSGDR
Trigger: TCTGTCACCAGAAAGACTCAATGCCTCCATAGCAGG...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCATGTGGGGTAGCAAAATaGGAAGGATTCATGGTAAGA +
Preference number: 5 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTACGVAK*EGFMVR
Trigger: TCTTACCATGAATCCTTCCAATTTTGCTACCCCACA...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTTCGACACTGGGAAGTTaGTTAGGATCCGAAGGCTGC +
Preference number: 5 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCSTLGS*LGSEGC
Trigger: GCAGCCTTCGGATCCTAACAAACTTCCCAGTGTCGA...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGGACAAATACAGTTATTaGATTTGGGGGCAAGGGAGT +
Preference number: 5 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRDKYSY*IWGQGS
Trigger: ACTCCCTTGCCCCCAAATCAAATAACTGTATTTGTC...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGACCTTGCTACCCGCATaGGGCATTGTGACAACTGTT +
Preference number: 5 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQTLLPA*GIVTTV
Trigger: AACAGTTGTCACAATGCCCAATGCGGGTAGCAAGGT...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCAGAAACCATAACCTaGCTACCCGCATTGGGCATT +
Preference number: 5 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLSETIT*LPALGI
Trigger: AATGCCCAATGCGGGTAGCAAGGTTATGGTTTCTGA...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCAAAATTTGGCCAATTTaGTCCACTTTTCCTTTGCCC +
Preference number: 5 (lower is better)
Translates to: NLELQLATPKGLNSPAFPKIWPI*STFPLP
Trigger: GGGCAAAGGAAAAGTGGACAAAATTGGCCAAATTTT...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp AACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTCCCCACTTTCTTACATGCCTaGGTCAACAAAATTTGGCCA +
Preference number: 5 (lower is better)
Translates to: NLELQLATPKGLNSPAFPTFLHA*VNKIWP
Trigger: TGGCCAAATTTTGTTGACCAAGGCATGTAAGAAAGT...GGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGTGGTTGAAGTTTCCTTaGAGACTAAATTCTGCGACG +
Preference number: 5 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRWLKFP*RLNSAT
Trigger: CGTCGCAGAATTTAGTCTCAAAGGAAACTTCAACCA...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGTTTTCAACTATCTCTTaGGGCTCACTGCTTTGTCCA +
Preference number: 5 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRFSTIS*GSLLCP
Trigger: TGGACAAAGCAGTGAGCCCAAAGAGATAGTTGAAAA...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAAGTCGCAGTCCTGCTaGTTTACTTGGATTTTCTTC +
Preference number: 5 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRKSQSC*FTWIFF
Trigger: GAAGAAAATCCAAGTAAACAAGCAGGACTGCGACTT...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCAAAGTCGCAGTCCTGCTaGTTTACTTGGATTTTCTTC +
Preference number: 5 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAKSQSC*FTWIFF
Trigger: GAAGAAAATCCAAGTAAACAAGCAGGACTGCGACTT...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTACCACAGGTTGCCAGTTaGCAACCTCTGCTACAGAAG +
Preference number: 5 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLPQVAS*QPLLQK
Trigger: CTTCTGTAGCAGAGGTTGCAAACTGGCAACCTGTGG...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS GCA 90 bp TGGAAGGATTCTGCGGGCTCTCCTGATAGACCATTTTCCTTGAATTaGTTCCCAAGGGAGTATTCACAGGCATTGGCATTCTTTGTTTAT +
Preference number: 5 (lower is better)
Translates to: WKDSAGSPDRPFSLN*FPREYSQALAFFVY
Trigger: ATAAACAAAGAATGCCAATGCCTGTGAATACTCCCTTGGGAAGCAATTCAAGGAAAATGGTCTATCAGGAGAGCCCGCAGAATCCTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTGCATGCTGGACATTTaGATTTGCTTGCAGCTGAGG +
Preference number: 5 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQCMLDI*ICLQLR
Trigger: CCTCAGCTGCAAGCAAATCAAAATGTCCAGCATGCA...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCGTTCAAGGTTCCTTGTaGCTGGACCATCTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVVQGSL*LDHLAL
Trigger: CAGGGCCAGATGGTCCAGCAACAAGGAACCTTGAAC...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTTATCATTGGGTTCTGTaGGAGCAAAACCTGCCCCTG +
Preference number: 5 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCYHWVL*EQNLPL
Trigger: CAGGGGCAGGTTTTGCTCCAACAGAACCCAATGATA...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACCTGCACCATATTTCCTaGCATGTTTGGAGTTGGTCC +
Preference number: 5 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHLHHIS*HVWSWS
Trigger: GGACCAACTCCAAACATGCAAGGAAATATGGTGCAG...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACGGGGACCATGTTGGTTaGTTGAATGCTAACATCAGG +
Preference number: 5 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHGDHVG*LNANIR
Trigger: CCTGATGTTAGCATTCAACAAACCAACATGGTCCCC...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTCCACTGAAAGGTGCATaGAAAGACATCCCATGGCCT +
Preference number: 5 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCPLKGA*KDIPWP
Trigger: AGGCCATGGGATGTCTTTCAATGCACCTTTCAGTGG...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTGGGAAGCCTGGATTTaGACCACAGGACATCTGATT +
Preference number: 5 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLWEAWI*TTGHLI
Trigger: AATCAGATGTCCTGTGGTCAAAATCCAGGCTTCCCA...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACTGGAGGATGGACATTTaGAGAGACTGGAAGCCTAAC +
Preference number: 5 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHWRMDI*RDWKPN
Trigger: GTTAGGCTTCCAGTCTCTCAAAATGTCCATCCTCCA...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTGCGATGGTCCAGGTTTaGGCCCTGTCATCATTAACT +
Preference number: 5 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCAMVQV*ALSSLT
Trigger: AGTTAATGATGACAGGGCCAAAACCTGGACCATCGC...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTAGCTCTGTTTGGTGTTTaGGGCCTAGATGTCTGGGTT +
Preference number: 5 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLALFGV*GLDVWV
Trigger: AACCCAGACATCTAGGCCCAAAACACCAAACAGAGC...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCACATTCAAGCTCTCCTaGTTATCCTCAACAACACCC +
Preference number: 5 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFTFKLS*LSSTTP
Trigger: GGGTGTTGTTGAGGATAACAAGGAGAGCTTGAATGT...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTACATTCAAGCTCTCCTaGTTATCCTCAACAACACCC +
Preference number: 5 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLTFKLS*LSSTTP
Trigger: GGGTGTTGTTGAGGATAACAAGGAGAGCTTGAATGT...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTATGACAGATGCTTTTTaGAGGTCCTCCCCAGAAACT +
Preference number: 5 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLMTDAF*RSSPET
Trigger: AGTTTCTGGGGAGGACCTCAAAAAAGCATCTGTCAT...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCGTGGGGCTGCAGGAATaGTGCTTGGCTGTGATCCTT +
Preference number: 5 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVVGLQE*CLAVIL
Trigger: AAGGATCACAGCCAAGCACAATTCCTGCAGCCCCAC...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCATTCAATTCTTTCACTaGCTGCACAGGGGGATGAGA +
Preference number: 5 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFIQFFH*LHRGMR
Trigger: TCTCATCCCCCTGTGCAGCAAGTGAAAGAATTGAAT...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGAAAGGGGAGAAACCATaGTGGTTGACTGTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQKGEKP*WLTVKR
Trigger: CCTCTTCACAGTCAACCACAATGGTTTCTCCCCTTT...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTCCTGCAGTGCTGTGGTaGAAGTTTCCTTTGAGACTA +
Preference number: 5 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTPAVLW*KFPLRL
Trigger: TAGTCTCAAAGGAAACTTCAACCACAGCACTGCAGG...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACTTTTCTTCGCTTGGATaGCACCGCACTGGTTATGTC +
Preference number: 5 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHFSSLG*HRTGYV
Trigger: GACATAACCAGTGCGGTGCAATCCAAGCGAAGAAAA...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTTGGATTTTCTTCGCTaGGATTGCACCGCACTGGTT +
Preference number: 5 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQLDFLR*DCTALV
Trigger: AACCAGTGCGGTGCAATCCAAGCGAAGAAAATCCAA...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACACATAGATCAGGGGTaGGCAAATGTTTTTGTAAAG +
Preference number: 5 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTAHIDQG*ANVFVK
Trigger: CTTTACAAAAACATTTGCCAACCCCTGATCTATGTG...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS TCA 90 bp TTAGCTGAAGTTGTGATGGGATTGGAAGTGACAAATACAGTTATTTaGTTTGGGGGCAAGGGAGTGGAAATGGAGGAAGAGCTAACAGGT +
Preference number: 5 (lower is better)
Translates to: LAEVVMGLEVTNTVI*FGGKGVEMEEELTG
Trigger: ACCTGTTAGCTCTTCCTCCATTTCCACTCCCTTGCCCCCAAATCAAATAACTGTATTTGTCACTTCCAATCCCATCACAACTTCAGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CCA 90 bp TGTTTATTAGCTCACAATTCTCTAAGTCAGAAGTCTAGGCACATCTaGGTTCTCTGCTTGGGATCCCACAAGTCTGAAATCAAGGTGTTG +
Preference number: 5 (lower is better)
Translates to: CLLAHNSLSQKSRHI*VLCLGSHKSEIKVL
Trigger: CAACACCTTGATTTCAGACTTGTGGGATCCCAAGCAGAGAACCCAGATGTGCCTAGACTTCTGACTTAGAGAATTGTGAGCTAATAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434040.5
CDS CCA 90 bp TTCTCAGGAGATTATTTTCCCTCTTACCCAAAGACCAGGTCAAGATaGACACATCCTTTTTGTCTCCCTTCGCTAGTAGGTGTTGGTTTT +
Preference number: 5 (lower is better)
Translates to: FSGDYFPSYPKTRSR*THPFCLPSLVGVGF
Trigger: AAAACCAACACCTACTAGCGAAGGGAGACAAAAAGGATGTGTCCATCTTGACCTGGTCTTTGGGTAAGAGGGAAAATAATCTCCTGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626057.1
CDS-3UTR CAA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGATTCATTCTCACATCTaGGCTTCGGTTCTGAGCCAA +
Preference number: 5 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQIHSHI*ASVLSQ
Trigger: TTGGCTCAGAACCGAAGCCAAGATGTGAGAATGAAT...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCGGGAAGTGGGTTATTTaGAGGTGGCCTTGGTCCCAT +
Preference number: 5 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVGKWVI*RWPWSH
Trigger: ATGGGACCAAGGCCACCTCAAAATAACCCACTTCCC...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTTGCATGCTGGACATTTaGATTTGCTTGCAGCTGAGG +
Preference number: 5 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCCMLDI*ICLQLR
Trigger: CCTCAGCTGCAAGCAAATCAAAATGTCCAGCATGCA...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTCTTATTCCCCTGCATTaGATTGGTCATAATCTGCTC +
Preference number: 5 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLLIPLH*IGHNLL
Trigger: GAGCAGATTATGACCAATCAAATGCAGGGGAATAAG...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTAGGGGACCATGTTGGTTaGTTGAATGCTAACATCAGG +
Preference number: 5 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLGDHVG*LNANIR
Trigger: CCTGATGTTAGCATTCAACAAACCAACATGGTCCCC...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTTGGGAAGCCTGGATTTaGACCACAGGACATCTGATT +
Preference number: 5 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCWEAWI*TTGHLI
Trigger: AATCAGATGTCCTGTGGTCAAAATCCAGGCTTCCCA...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTAGCGTGACATCCTTATaGACTGGGAAGCCTGGATTT +
Preference number: 5 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCSVTSL*TGKPGF
Trigger: AAATCCAGGCTTCCCAGTCAATAAGGATGTCACGCT...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTAAGCGTGACATCCTTATaGACTGGGAAGCCTGGATTT +
Preference number: 5 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLSVTSL*TGKPGF
Trigger: AAATCCAGGCTTCCCAGTCAATAAGGATGTCACGCT...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTTGGAGGATGGACATTTaGAGAGACTGGAAGCCTAAC +
Preference number: 5 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCWRMDI*RDWKPN
Trigger: GTTAGGCTTCCAGTCTCTCAAAATGTCCATCCTCCA...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTACCATTTTCCTTGAATaGCTTCCCAAGGGAGTATTC +
Preference number: 5 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLTIFLE*LPKGVF
Trigger: GAATACTCCCTTGGGAAGCAATTCAAGGAAAATGGT...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCACATGTGAAGGCATGTaGTTTGGGCCTCCTGGGACA +
Preference number: 5 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVTCEGM*FGPPGT
Trigger: TGTCCCAGGAGGCCCAAACAACATGCCTTCACATGT...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTTGTGGGGTAGCAAAATaGGAAGGATTCATGGTAAGA +
Preference number: 5 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLCGVAK*EGFMVR
Trigger: TCTTACCATGAATCCTTCCAATTTTGCTACCCCACA...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTGGAGACACCAAATTTTaGTTCTCTTCGACACTGGGA +
Preference number: 5 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTGDTKF*FSSTLG
Trigger: TCCCAGTGTCGAAGAGAACAAAAATTTGGTGTCTCC...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCGGTTTAATTGTCACATaGGGAGCTCCAGAGTTGTCA +
Preference number: 5 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLGLIVT*GAPELS
Trigger: TGACAACTCTGGAGCTCCCAATGTGACAATTAAACC...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTAAAGGGGAGAAACCATaGTGGTTGACTGTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCKGEKP*WLTVKR
Trigger: CCTCTTCACAGTCAACCACAATGGTTTCTCCCCTTT...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTCCATCTGCACCATATaGTTCTTCCCCTTTCTCAAG +
Preference number: 5 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLSICTI*FFPFLK
Trigger: CTTGAGAAAGGGGAAGAACAATATGGTGCAGATGGA...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACTCCATCTGCACCATATaGTTCTTCCCCTTTCTCAAG +
Preference number: 5 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHSICTI*FFPFLK
Trigger: CTTGAGAAAGGGGAAGAACAATATGGTGCAGATGGA...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCTTTTCAACTATCTCTTaGGGCTCACTGCTTTGTCCA +
Preference number: 5 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFFSTIS*GSLLCP
Trigger: TGGACAAAGCAGTGAGCCCAAAGAGATAGTTGAAAA...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCCTTCGGCCTGGGATTTaGGACTTTTCAACTATCTCT +
Preference number: 5 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLLRPGI*DFSTIS
Trigger: AGAGATAGTTGAAAAGTCCAAAATCCCAGGCCGAAG...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCTTTCAGAGGCCACAGTaGGCTCTTCAGTTCGGGAGT +
Preference number: 5 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVFQRPQ*ALQFGS
Trigger: ACTCCCGAACTGAAGAGCCAACTGTGGCCTCTGAAA...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTTTGGATTTTCTTCGCTaGGATTGCACCGCACTGGTT +
Preference number: 5 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCLDFLR*DCTALV
Trigger: AACCAGTGCGGTGCAATCCAAGCGAAGAAAATCCAA...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTGTCCTGCTTGTTTACTaGGATTTTCTTCGCTTGGAT +
Preference number: 5 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLVLLVY*DFLRLD
Trigger: ATCCAAGCGAAGAAAATCCAAGTAAACAAGCAGGAC...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCATGAGAAGATTGCTTTaGCCCCCACTACTGCTATTC +
Preference number: 5 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLMRRLL*PPLLLF
Trigger: GAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCAT...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACATGAGAAGATTGCTTTaGCCCCCACTACTGCTATTC +
Preference number: 5 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHMRRLL*PPLLLF
Trigger: GAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCAT...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACTTCCAAATGAGAAGATaGCTTTTGCCCCCACTACTG +
Preference number: 5 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHFQMRR*LLPPLL
Trigger: CAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CCCCCACTACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGTACTCAACTCTGCTATaGGTACCACAAAAGAAGATA +
Preference number: 5 (lower is better)
Translates to: PPLLLFTHSTSTAQYIIRYSTLL*VPQKKI
Trigger: TATCTTCTTTTGTGGTACCAATAGCAGAGTTGAGTA...CCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS-3UTR CAA 90 bp AGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCCACGGCAAATATGGGCTTGCTGTaGACAGATCTTCCAATTTTT +
Preference number: 5 (lower is better)
Translates to: RRLLLPPLLLFTHSTSTANMGLL*TDLPIF
Trigger: AAAAATTGGAAGATCTGTCAACAGCAAGCCCATATT...TGCCGTGGAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS TCA 90 bp GGGTTGGCAAATGTTTTTGTAAAGAGTATTTCCAGCTTTGTGAGCTaGCACAACACATCTCTGTCACGACTACTCAACTCTGCTATTGGT +
Preference number: 5 (lower is better)
Translates to: GLANVFVKSISSFVS*HNTSLSRLLNSAIG
Trigger: ACCAATAGCAGAGTTGAGTAGTCGTGACAGAGATGTGTTGTGTCAGCTCACAAAGCTGGAAATACTCTTTACAAAAACATTTGCCAACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS-3UTR CAA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTTCTGTACTTTTAGCTaGCTGGACTCCATGTGTAAC +
Preference number: 5 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQFCTFS*LDSMCN
Trigger: GTTACACATGGAGTCCAGCAAGCTAAAAGTACAGAA...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTTCTGTACTTTTAGCTaGCTGGACTCCATGTGTAAC +
Preference number: 5 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLFCTFS*LDSMCN
Trigger: GTTACACATGGAGTCCAGCAAGCTAAAAGTACAGAA...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTCTTATTCCCCTGCATTaGATTGGTCATAATCTGCTC +
Preference number: 5 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTLIPLH*IGHNLL
Trigger: GAGCAGATTATGACCAATCAAATGCAGGGGAATAAG...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTATTTCCTTGCATGTTaGGAGTTGGTCCCCTCATTA +
Preference number: 5 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLYFLAC*ELVPSL
Trigger: TAATGAGGGGACCAACTCCAAACATGCAAGGAAATA...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTGACCATGTTGGTTTGTaGAATGCTAACATCAGGCAT +
Preference number: 5 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTDHVGL*NANIRH
Trigger: ATGCCTGATGTTAGCATTCAACAAACCAACATGGTC...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTATCACTCTGCAATAAGTaGACCAACAATGGGCTCGTT +
Preference number: 5 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLSLCNK*TNNGLV
Trigger: AACGAGCCCATTGTTGGTCAACTTATTGCAGAGTGA...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTGAGTATTCACAGGCATaGGCATTCTTTGTTTATCAG +
Preference number: 5 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLEYSQA*AFFVYQ
Trigger: CTGATAAACAAAGAATGCCAATGCCTGTGAATACTC...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCGAGTATTCACAGGCATaGGCATTCTTTGTTTATCAG +
Preference number: 5 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFEYSQA*AFFVYQ
Trigger: CTGATAAACAAAGAATGCCAATGCCTGTGAATACTC...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGACCATTTTCCTTGAATaGCTTCCCAAGGGAGTATTC +
Preference number: 5 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQTIFLE*LPKGVF
Trigger: GAATACTCCCTTGGGAAGCAATTCAAGGAAAATGGT...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCCCTGCTATGGAGGCATaGAGTCTTTCTGGTGACAGA +
Preference number: 5 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVPAMEA*SLSGDR
Trigger: TCTGTCACCAGAAAGACTCAATGCCTCCATAGCAGG...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp ACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGGACAAATACAGTTATTaGATTTGGGGGCAAGGGAGT +
Preference number: 5 (lower is better)
Translates to: TFPNEKIAFAPTTAIHTQDKYSY*IWGQGS
Trigger: ACTCCCTTGCCCCCAAATCAAATAACTGTATTTGTC...CTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTGAAGTTGTGATGGGATaGGAAGTGACAAATACAGTT +
Preference number: 5 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLEVVMG*EVTNTV
Trigger: AACTGTATTTGTCACTTCCAATCCCATCACAACTTC...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCCAGACTGCAAGTGAGTaGGCAAAGCTGCTGATGTGT +
Preference number: 5 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVQTASE*AKLLMC
Trigger: ACACATCAGCAGCTTTGCCAACTCACTTGCAGTCTG...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp TTAGAAACCTTGAACTTCAACTCGCAACACCAAAAGGGCTCAACAGTCCTGCTTAAAATTTGGCCAATTTaGTCCACTTTTCCTTTGCCC +
Preference number: 5 (lower is better)
Translates to: LETLNFNSQHQKGSTVLLKIWPI*STFPLP
Trigger: GGGCAAAGGAAAAGTGGACAAAATTGGCCAAATTTT...AAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAGTTCAAGGTTTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp CCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTCACTTTCTTACATGCCTaGGTCAACAAAATTTGGCCA +
Preference number: 5 (lower is better)
Translates to: PNEKIAFAPTTAIHTQYFTFLHA*VNKIWP
Trigger: TGGCCAAATTTTGTTGACCAAGGCATGTAAGAAAGT...GAAGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTTGGTTGAAGTTTCCTTaGAGACTAAATTCTGCGACG +
Preference number: 5 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTWLKFP*RLNSAT
Trigger: CGTCGCAGAATTTAGTCTCAAAGGAAACTTCAACCA...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTACTTCGGCCTGGGATTTaGGACTTTTCAACTATCTCT +
Preference number: 5 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLLRPGI*DFSTIS
Trigger: AGAGATAGTTGAAAAGTCCAAAATCCCAGGCCGAAG...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTAATGAGAAGATTGCTTTaGCCCCCACTACTGCTATTC +
Preference number: 5 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLMRRLL*PPLLLF
Trigger: GAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCAT...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTACCACACTTGACAGCTTaGCAATGGTTTCCAAAACTC +
Preference number: 5 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLPHLTA*QWFPKL
Trigger: GAGTTTTGGAAACCATTGCAAAGCTGTCAAGTGTGG...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS-3UTR CAA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTAAAACTAAGTAGCTCCTaGGAAGCATCTCCTGCAACA +
Preference number: 5 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLKLSSS*EASPAT
Trigger: TGTTGCAGGAGATGCTTCCAAGGAGCTACTTAGTTT...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS TCA 90 bp TCACTCAATTCGGGATGCACAAGGGATGAACACAGCTCATTACTGTaGGGTAAGTTTAGGGAATTAGAAGGTTCTTTAGAAGAAGACAGA +
Preference number: 5 (lower is better)
Translates to: SLNSGCTRDEHSSLL*GKFRELEGSLEEDR
Trigger: TCTGTCTTCTTCTAAAGAACCTTCTAATTCCCTAAACTTACCTCACAGTAATGAGCTGTGTTCATCCCTTGTGCATCCCGAATTGAGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTTTCTGTACTTTTAGCTaGCTGGACTCCATGTGTAAC +
Preference number: 5 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCFCTFS*LDSMCN
Trigger: GTTACACATGGAGTCCAGCAAGCTAAAAGTACAGAA...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTCTTATTCCCCTGCATTaGATTGGTCATAATCTGCTC +
Preference number: 5 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCLIPLH*IGHNLL
Trigger: GAGCAGATTATGACCAATCAAATGCAGGGGAATAAG...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TACTGCTATTCACACACAGTACTTCCACGGCACAATACATCATTAGGAGATCTAGACCATGTTGGTTTGTaGAATGCTAACATCAGGCAT +
Preference number: 5 (lower is better)
Translates to: YCYSHTVLPRHNTSLGDLDHVGL*NANIRH
Trigger: ATGCCTGATGTTAGCATTCAACAAACCAACATGGTC...TAGATCTCCTAATGATGTATTGTGCCGTGGAAGTACTGTGTGTGAATAGCAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCATCCAAGTTAATTCCTaGTTCTCCAGGCAACGGTGG +
Preference number: 5 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVIQVNS*FSRQRW
Trigger: CCACCGTTGCCTGGAGAACAAGGAATTAACTTGGAT...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CAACATTTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACGAAGTTGTGATGGGATaGGAAGTGACAAATACAGTT +
Preference number: 5 (lower is better)
Translates to: QHFQMRRLLLPPLLLFTHEVVMG*EVTNTV
Trigger: AACTGTATTTGTCACTTCCAATCCCATCACAACTTC...GTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAAATGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp TCATTAGGAGATCTAAAAATGCTCACCCTGTACTCTAGGCTGCTTAGGAAATGTTGGTTGAAGTTTCCTTaGAGACTAAATTCTGCGACG +
Preference number: 5 (lower is better)
Translates to: SLGDLKMLTLYSRLLRKCWLKFP*RLNSAT
Trigger: CGTCGCAGAATTTAGTCTCAAAGGAAACTTCAACCA...ACATTTCCTAAGCAGCCTAGAGTACAGGGTGAGCATTTTTAGATCTCCTAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCCCTGCAGTGCTGTGGTaGAAGTTTCCTTTGAGACTA +
Preference number: 5 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVPAVLW*KFPLRL
Trigger: TAGTCTCAAAGGAAACTTCAACCACAGCACTGCAGG...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCTTTTCTTCGCTTGGATaGCACCGCACTGGTTATGTC +
Preference number: 5 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVFSSLG*HRTGYV
Trigger: GACATAACCAGTGCGGTGCAATCCAAGCGAAGAAAA...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp ACTTCCACGGCACAATACATCATTAGGAGATCTAAAAATGCTCACCCTGTACTCGCAATGAGGTTTTATTaGTCCAAGGTCACACAATCA +
Preference number: 5 (lower is better)
Translates to: TSTAQYIIRRSKNAHPVLAMRFY*SKVTQS
Trigger: TGATTGTGTGACCTTGGACAAATAAAACCTCATTGC...GAGTACAGGGTGAGCATTTTTAGATCTCCTAATGATGTATTGTGCCGTGGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS TCA 90 bp TCTGCTGACACCTCTGATTTCCTTAACCAAAAACTACACCACACTTaGCAGCTTTGCAATGGTTTCCAAAACTCTATTACTCTGCCAAAA +
Preference number: 5 (lower is better)
Translates to: SADTSDFLNQKLHHT*QLCNGFQNSITLPK
Trigger: TTTTGGCAGAGTAATAGAGTTTTGGAAACCATTGCAAAGCTGTCAAGTGTGGTGTAGTTTTTGGTTAAGGAAATCAGAGGTGTCAGCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS CCA 90 bp TCTCACCCTACATGGTATGGAGACAAAGCTGGCACAGATACAACTTaGTTTGTTTGGGACATAAGACACTTGGTCTATTTTTATTTCTAC +
Preference number: 5 (lower is better)
Translates to: SHPTWYGDKAGTDTT*FVWDIRHLVYFYFY
Trigger: GTAGAAATAAAAATAGACCAAGTGTCTTATGTCCCAAACAAACCAAGTTGTATCTGTGCCAGCTTTGTCTCCATACCATGTAGGGTGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471897.1
CDS-3UTR CAA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCATTCAATTCTTTCACTaGCTGCACAGGGGGATGAGA +
Preference number: 5 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVIQFFH*LHRGMR
Trigger: TCTCATCCCCCTGTGCAGCAAGTGAAAGAATTGAAT...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS-3UTR CAA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCCTTCGGCCTGGGATTTaGGACTTTTCAACTATCTCT +
Preference number: 5 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVLRPGI*DFSTIS
Trigger: AGAGATAGTTGAAAAGTCCAAAATCCCAGGCCGAAG...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCGTCCTGCTTTCCCCATaGCACTTTATGAAACAGGTT +
Preference number: 5 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVVLLSP*HFMKQV
Trigger: AACCTGTTTCATAAAGTGCAATGGGGAAAGCAGGAC...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp TTCCAAATGAGAAGATTGCTTTTGCCCCCACTACTGCTATTCACACACAGTACTAACATTTTAGAAACCTaGAACTTCAACTCGCAACAC +
Preference number: 5 (lower is better)
Translates to: FQMRRLLLPPLLLFTHSTNILET*NFNSQH
Trigger: GTGTTGCGAGTTGAAGTTCAAGGTTTCTAAAATGTT...AGTACTGTGTGTGAATAGCAGTAGTGGGGGCAAAAGCAATCTTCTCATTTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCGACCATGTTGGTTTGTaGAATGCTAACATCAGGCAT +
Preference number: 5 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVDHVGL*NANIRH
Trigger: ATGCCTGATGTTAGCATTCAACAAACCAACATGGTC...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCTTTTCAACTATCTCTTaGGGCTCACTGCTTTGTCCA +
Preference number: 5 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVFSTIS*GSLLCP
Trigger: TGGACAAAGCAGTGAGCCCAAAGAGATAGTTGAAAA...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCGTCCTGCTTGTTTACTaGGATTTTCTTCGCTTGGAT +
Preference number: 5 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVVLLVY*DFLRLD
Trigger: ATCCAAGCGAAGAAAATCCAAGTAAACAAGCAGGAC...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS-3UTR CAA 90 bp CACAGCTCAAAATTGCTCTTTGTAAAAGTCACACACATTTCCAAGTATCAAGTCAAGTCGCAGTCCTGCTaGTTTACTTGGATTTTCTTC +
Preference number: 5 (lower is better)
Translates to: HSSKLLFVKVTHISKYQVKSQSC*FTWIFF
Trigger: GAAGAAAATCCAAGTAAACAAGCAGGACTGCGACTT...GACTTGATACTTGGAAATGTGTGTGACTTTTACAAAGAGCAATTTTGAGCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
CDS TCA 90 bp TTCATTCTCTATCATCATATAGACATTGGATGGCAAATTAGAGGTTaGACATCCAACACTCAAACACATAGATCAGGGGTTGGCAAATGT +
Preference number: 5 (lower is better)
Translates to: FILYHHIDIGWQIRG*TSNTQTHRSGVGKC
Trigger: ACATTTGCCAACCCCTGATCTATGTGTTTGAGTGTTGGATGTTCAACCTCTAATTTGCCATCCAATGTCTATATGATGATAGAGAATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS TCA 90 bp TTAATCCTCACAAAACCCTATGAGATTACTATTATCCTTAAAGACTaGGGCGCAATGAGGTTTTATTTGTCCAAGGTCACACAATCAGCA +
Preference number: 5 (lower is better)
Translates to: LILTKPYEITIILKD*GAMRFYLSKVTQSA
Trigger: TGCTGATTGTGTGACCTTGGACAAATAAAACCTCATTGCGCCTCAGTCTTTAAGGATAATAGTAATCTCATAGGGTTTTGTGAGGATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS TCA 90 bp GGTTGTGTAGCAGGAAGTTCCTATCAATCTTGCAGTTCACTTCTCTaGAACTATTCTGTATATCCAAGGATAGTCACTGTAGCATTATTT +
Preference number: 5 (lower is better)
Translates to: GCVAGSSYQSCSSLL*NYSVYPRIVTVALF
Trigger: AAATAATGCTACAGTGACTATCCTTGGATATACAGAATAGTTTCAGAGAAGTGAACTGCAAGATTGATAGGAACTTCCTGCTACACAACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626057.1
CDS TCA 90 bp GAATTAGACTGCTTTCCAGAATTCACTACCACAGAATCTAATTTGTaGGTTTGTGGGGTAGCAAAATTGGAAGGATTCATGGTAAGATTT +
Preference number: 5 (lower is better)
Translates to: ELDCFPEFTTTESNL*VCGVAKLEGFMVRF
Trigger: AAATCTTACCATGAATCCTTCCAATTTTGCTACCCCACAAACTCACAAATTAGATTCTGTGGTAGTGAATTCTGGAAAGCAGTCTAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS GCA 90 bp CTTTGTGAGCTGACACAACACATCTCTGTCACGACTACTCAACTCTaGTATTGGTACCACAAAAGAAGATATGGACAATATATAAATAAA +
Preference number: 5 (lower is better)
Translates to: LCELTQHISVTTTQL*YWYHKRRYGQYINK
Trigger: TTTATTTATATATTGTCCATATCTTCTTTTGTGGTACCAATAGCAGAGTTGAGTAGTCGTGACAGAGATGTGTTGTGTCAGCTCACAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS CCA 72 bp AGCGTACACTGGTGGGGAGAGCACCGCCAGGTAAGCTaGGTCCTGCTGAGGCAGTGCCCGGGCCCACAGGGC +
Preference number: 6 (lower is better)
Translates to: SVHWWGEHRQVS*VLLRQCPGPQG
Trigger: GCCCTGTGGGCCCGGGCACTGCCTCAGCAGGACCCAGCTTACCTGGCGGTGCTCTCCCCACCAGTGTACGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS GCA 72 bp CCATCTGGCCCTGGGAGGGCACGATTTGCTGGTGCATaGCCATCAGCTGAGATGGTGGGCCCTGCTGGGGCT +
Preference number: 6 (lower is better)
Translates to: PSGPGRARFAGA*PSAEMVGPAGA
Trigger: AGCCCCAGCAGGGCCCACCATCTCAGCTGATGGGCATGCACCAGCAAATCGTGCCCTCCCAGGGCCAGATGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS TCA 72 bp GGATCCGTAGCCGCTCCGCTGCTTCCCGGGGGATGTTaGATGTCACACGCACGCTGTTCCAGGGCTCCACCT +
Preference number: 6 (lower is better)
Translates to: GSVAAPLLPGGC*MSHARCSRAPP
Trigger: AGGTGGAGCCCTGGAACAGCGTGCGTGTGACATTCAACATCCCCCGGGAAGCAGCGGAGCGGCTACGGATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS GCA 72 bp GGCGCCATCATTTGTGGGCCCTGCTGGGAAAGCATCTaGTTGGGTGGGGTCATCCTTTGGGGCGAGGGCCCA +
Preference number: 6 (lower is better)
Translates to: GAIICGPCWESI*LGGVILWGEGP
Trigger: TGGGCCCTCGCCCCAAAGGATGACCCCACCCAAGCAGATGCTTTCCCAGCAGGGCCCACAAATGATGGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CAA 90 bp GAGGGGGAGGGTGGGAAGGCGTCTGTACCGTGGCTAAGGATGGTCTaGCCTGGAGTTGCTGTTGCATTGGGCCGGGCAAGGGAGCCTTCT +
Preference number: 6 (lower is better)
Translates to: EGEGGKASVPWLRMV*PGVAVALGRAREPS
Trigger: AGAAGGCTCCCTTGCCCGGCCCAATGCAACAGCAACTCCAGGCAAGACCATCCTTAGCCACGGTACAGACGCCTTCCCACCCTCCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CCA 72 bp GGGCACGATTTGCTGGTGCATGCCCATCAGCTGAGATaGTGGGCCCTGCTGGGGCTGGCCTTGCATGTTGCT +
Preference number: 6 (lower is better)
Translates to: GHDLLVHAHQLR*WALLGLALHVA
Trigger: AGCAACATGCAAGGCCAGCCCCAGCAGGGCCCACCATCTCAGCTGATGGGCATGCACCAGCAAATCGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CCA 72 bp CACGATTTGCTGGTGCATGCCCATCAGCTGAGATGGTaGGCCCTGCTGGGGCTGGCCTTGCATGTTGCTGAG +
Preference number: 6 (lower is better)
Translates to: HDLLVHAHQLRW*ALLGLALHVAE
Trigger: CTCAGCAACATGCAAGGCCAGCCCCAGCAGGGCCCACCATCTCAGCTGATGGGCATGCACCAGCAAATCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CCA 72 bp CGGAGGGTACCAGAGTGGTTACTATCGAGCGTACACTaGTGGGGAGAGCACCGCCAGGTAAGCTGGGTCCTG +
Preference number: 6 (lower is better)
Translates to: RRVPEWLLSSVH*WGEHRQVSWVL
Trigger: CAGGACCCAGCTTACCTGGCGGTGCTCTCCCCACCAGTGTACGCTCGATAGTAACCACTCTGGTACCCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CAA 72 bp GGTGGGAAGGCGTCTGTACCGTGGCTAAGGATGGTCTaGCCTGGAGTTGCTGTTGCATTGGGCCGGGCAAGG +
Preference number: 6 (lower is better)
Translates to: GGKASVPWLRMV*PGVAVALGRAR
Trigger: CCTTGCCCGGCCCAATGCAACAGCAACTCCAGGCAAGACCATCCTTAGCCACGGTACAGACGCCTTCCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CAA 72 bp GCCATCATTTGTGGGCCCTGCTGGGAAAGCATCTGCTaGGGTGGGGTCATCCTTTGGGGCGAGGGCCCAAGA +
Preference number: 6 (lower is better)
Translates to: AIICGPCWESIC*GGVILWGEGPR
Trigger: TCTTGGGCCCTCGCCCCAAAGGATGACCCCACCCAAGCAGATGCTTTCCCAGCAGGGCCCACAAATGATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CAA 90 bp GAGTTGCTGTTGCATTGGGCCGGGCAAGGGAGCCTTCTTCCACCCTaGGTTTGCAGTCATTGTGCCCAGAGAACCCTGGGCTGGAGGAGG +
Preference number: 6 (lower is better)
Translates to: ELLLHWAGQGSLLPP*VCSHCAQRTLGWRR
Trigger: CCTCCTCCAGCCCAGGGTTCTCTGGGCACAATGACTGCAAACCAAGGGTGGAAGAAGGCTCCCTTGCCCGGCCCAATGCAACAGCAACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CAA 90 bp GTGCATGCCCATCAGCTGAGATGGTGGGCCCTGCTGGGGCTGGCCTaGCATGTTGCTGAGGTTCACTTGAGGAACCCCAGAAGTACCAGC +
Preference number: 6 (lower is better)
Translates to: VHAHQLRWWALLGLA*HVAEVHLRNPRSTS
Trigger: GCTGGTACTTCTGGGGTTCCTCAAGTGAACCTCAGCAACATGCAAGGCCAGCCCCAGCAGGGCCCACCATCTCAGCTGATGGGCATGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS GCA 72 bp ACCGTGGCTAAGGATGGTCTTGCCTGGAGTTGCTGTTaGATTGGGCCGGGCAAGGGAGCCTTCTTCCACCCT +
Preference number: 6 (lower is better)
Translates to: TVAKDGLAWSCC*IGPGKGAFFHP
Trigger: AGGGTGGAAGAAGGCTCCCTTGCCCGGCCCAATGCAACAGCAACTCCAGGCAAGACCATCCTTAGCCACGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS GCA 72 bp TGCAGACTGACCATGACAGGCACACTGCCACTCTGTTaGATGGGCATTCTCTGGGAGTCGGGGTTCAGGGGG +
Preference number: 6 (lower is better)
Translates to: CRLTMTGTLPLC*MGILWESGFRG
Trigger: CCCCCTGAACCCCGACTCCCAGAGAATGCCCATGCAACAGAGTGGCAGTGTGCCTGTCATGGTCAGTCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CCA 72 bp CAGCTGGTTCCAGCCTGGAGGAACAGGCACCTGAGTTaGGGCAGTAAACTGGGGTCGAATTCCCTGTGGCTG +
Preference number: 6 (lower is better)
Translates to: QLVPAWRNRHLS*GSKLGSNSLWL
Trigger: CAGCCACAGGGAATTCGACCCCAGTTTACTGCCCCAACTCAGGTGCCTGTTCCTCCAGGCTGGAACCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CCA 72 bp GGGTTCAAGGTTCCTTGTTGCTGGACCATCTGGCCCTaGGAGGGCACGATTTGCTGGTGCATGCCCATCAGC +
Preference number: 6 (lower is better)
Translates to: GFKVPCCWTIWP*EGTICWCMPIS
Trigger: GCTGATGGGCATGCACCAGCAAATCGTGCCCTCCCAGGGCCAGATGGTCCAGCAACAAGGAACCTTGAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CCA 72 bp CCATCATTTGTGGGCCCTGCTGGGAAAGCATCTGCTTaGGTGGGGTCATCCTTTGGGGCGAGGGCCCAAGAT +
Preference number: 6 (lower is better)
Translates to: PSFVGPAGKASA*VGSSFGARAQD
Trigger: ATCTTGGGCCCTCGCCCCAAAGGATGACCCCACCCAAGCAGATGCTTTCCCAGCAGGGCCCACAAATGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CCA 72 bp AGGGTACCAGAGTGGTTACTATCGAGCGTACACTGGTaGGGAGAGCACCGCCAGGTAAGCTGGGTCCTGCTG +
Preference number: 6 (lower is better)
Translates to: RVPEWLLSSVHW*GEHRQVSWVLL
Trigger: CAGCAGGACCCAGCTTACCTGGCGGTGCTCTCCCCACCAGTGTACGCTCGATAGTAACCACTCTGGTACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CCA 72 bp TTCTGCGACGGGGCTATGCTGGGTAGAAGTTCTGGATaGGATCCCACCTTCTCCTCCACTAGGCCACCCGCA +
Preference number: 6 (lower is better)
Translates to: FCDGAMLGRSSG*DPTFSSTRPPA
Trigger: TGCGGGTGGCCTAGTGGAGGAGAAGGTGGGATCCCATCCAGAACTTCTACCCAGCATAGCCCCGTCGCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CAA 72 bp CATCAGCTGAGATGGTGGGCCCTGCTGGGGCTGGCCTaGCATGTTGCTGAGGTTCACTTGAGGAACCCCAGA +
Preference number: 6 (lower is better)
Translates to: HQLRWWALLGLA*HVAEVHLRNPR
Trigger: TCTGGGGTTCCTCAAGTGAACCTCAGCAACATGCAAGGCCAGCCCCAGCAGGGCCCACCATCTCAGCTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CAA 90 bp TGGTGGGCCCTGCTGGGGCTGGCCTTGCATGTTGCTGAGGTTCACTaGAGGAACCCCAGAAGTACCAGCCTGCTGATTGTTCATGTTGCC +
Preference number: 6 (lower is better)
Translates to: WWALLGLALHVAEVH*RNPRSTSLLIVHVA
Trigger: GGCAACATGAACAATCAGCAGGCTGGTACTTCTGGGGTTCCTCAAGTGAACCTCAGCAACATGCAAGGCCAGCCCCAGCAGGGCCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CAA 90 bp CTGCTGCTGTGGTGGCTGTGGTGGGGGTGCCACATGCTGCATGAGTaGAGGAGGCATCTGCTGAAGTGGCCTCTGTTCAACTGGTTGAGA +
Preference number: 6 (lower is better)
Translates to: LLLWWLWWGCHMLHE*RRHLLKWPLFNWLR
Trigger: TCTCAACCAGTTGAACAGAGGCCACTTCAGCAGATGCCTCCTCAACTCATGCAGCATGTGGCACCCCCACCACAGCCACCACAGCAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS TCA 72 bp AGAATCCCTAAATCCCGAAGCTGCTGGTTGTTGCTCTaGGCAAGGATCCGTAGCCGCTCCGCTGCTTCCCGG +
Preference number: 6 (lower is better)
Translates to: RIPKSRSCWLLL*ARIRSRSAASR
Trigger: CCGGGAAGCAGCGGAGCGGCTACGGATCCTTGCTCAGAGCAACAACCAGCAGCTTCGGGATTTAGGGATTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS TCA 72 bp GAAGGCAGCTGGTTCCAGCCTGGAGGAACAGGCACCTaGGTTGGGGCAGTAAACTGGGGTCGAATTCCCTGT +
Preference number: 6 (lower is better)
Translates to: EGSWFQPGGTGT*VGAVNWGRIPC
Trigger: ACAGGGAATTCGACCCCAGTTTACTGCCCCAACTCAGGTGCCTGTTCCTCCAGGCTGGAACCAGCTGCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS TCA 72 bp GACAGATGGTGCTTCACTGCCACTTGCTTCAGGGAGTaGGGCCATCTCCGCCAGTGGCGAGCTGGAAGGATT +
Preference number: 6 (lower is better)
Translates to: DRWCFTATCFRE*GHLRQWRAGRI
Trigger: AATCCTTCCAGCTCGCCACTGGCGGAGATGGCCTCACTCCCTGAAGCAAGTGGCAGTGAAGCACCATCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CCA 72 bp CCTTGGTCCCATCTGCTGCTGAGTTTGGTTAACCGTTaGGGAGGATGCAGGGGATCCCTGCTGGAAGGAGGA +
Preference number: 6 (lower is better)
Translates to: PWSHLLLSLVNR*GGCRGSLLEGG
Trigger: TCCTCCTTCCAGCAGGGATCCCCTGCATCCTCCCCAACGGTTAACCAAACTCAGCAGCAGATGGGACCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CCA 72 bp CATTTGTGGGCCCTGCTGGGAAAGCATCTGCTTGGGTaGGGTCATCCTTTGGGGCGAGGGCCCAAGATTTTG +
Preference number: 6 (lower is better)
Translates to: HLWALLGKHLLG*GHPLGRGPKIL
Trigger: CAAAATCTTGGGCCCTCGCCCCAAAGGATGACCCCACCCAAGCAGATGCTTTCCCAGCAGGGCCCACAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CCA 72 bp AGGCCCCATCATCTGGTTATGTGGCGCCATCATTTGTaGGCCCTGCTGGGAAAGCATCTGCTTGGGTGGGGT +
Preference number: 6 (lower is better)
Translates to: RPHHLVMWRHHL*ALLGKHLLGWG
Trigger: ACCCCACCCAAGCAGATGCTTTCCCAGCAGGGCCCACAAATGATGGCGCCACATAACCAGATGATGGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CCA 72 bp CCGCAGGACCTGTCCCTGAATGCCCATAACCTGAGATaGACTGTTGTTCACAGGCCCTTGCTGGGGCAGCAT +
Preference number: 6 (lower is better)
Translates to: PQDLSLNAHNLR*TVVHRPLLGQH
Trigger: ATGCTGCCCCAGCAAGGGCCTGTGAACAACAGTCCATCTCAGGTTATGGGCATTCAGGGACAGGTCCTGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CAA 72 bp CTGTGGGGGTCTTGCCTGCAACTGTTGTTGCTGCTGTaGCTGTTGTTGCTGCTGCTGCTGCTGCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: LWGSCLQLLLLL*LLLLLLLLLLL
Trigger: CAGCAGCAGCAGCAGCAGCAGCAGCAACAACAGCAACAGCAGCAACAACAGTTGCAGGCAAGACCCCCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CAA 72 bp CTGAGGCCCCATCATCTGGTTATGTGGCGCCATCATTaGTGGGCCCTGCTGGGAAAGCATCTGCTTGGGTGG +
Preference number: 6 (lower is better)
Translates to: LRPHHLVMWRHH*WALLGKHLLGW
Trigger: CCACCCAAGCAGATGCTTTCCCAGCAGGGCCCACAAATGATGGCGCCACATAACCAGATGATGGGGCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CAA 72 bp TGGTGGCTGTGGTGGGGGTGCCACATGCTGCATGAGTaGAGGAGGCATCTGCTGAAGTGGCCTCTGTTCAAC +
Preference number: 6 (lower is better)
Translates to: WWLWWGCHMLHE*RRHLLKWPLFN
Trigger: GTTGAACAGAGGCCACTTCAGCAGATGCCTCCTCAACTCATGCAGCATGTGGCACCCCCACCACAGCCACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CAA 90 bp GGGCTGCATCATATTTGGCGGCCCGTGGGACACCTGCATCTGGTTTaGAGGAGGACCAGCTCCTTGACCACCTGCATGCTGGACATTTTG +
Preference number: 6 (lower is better)
Translates to: GLHHIWRPVGHLHLV*RRTSSLTTCMLDIL
Trigger: CAAAATGTCCAGCATGCAGGTGGTCAAGGAGCTGGTCCTCCTCAAAACCAGATGCAGGTGTCCCACGGGCCGCCAAATATGATGCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS TCA 72 bp TACTGTCCAGCTCTGTGGATAACTGCTCTGTTCCCATaGGCCCCGGAGCTGTGGTGTCTAGCCCTTGGCCTT +
Preference number: 6 (lower is better)
Translates to: YCPALWITALFP*APELWCLALGL
Trigger: AAGGCCAAGGGCTAGACACCACAGCTCCGGGGCTCATGGGAACAGAGCAGTTATCCACAGAGCTGGACAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS GCA 72 bp CGGAGAGAATCCCTAAATCCCGAAGCTGCTGGTTGTTaGTCTGAGCAAGGATCCGTAGCCGCTCCGCTGCTT +
Preference number: 6 (lower is better)
Translates to: RRESLNPEAAGC*SEQGSVAAPLL
Trigger: AAGCAGCGGAGCGGCTACGGATCCTTGCTCAGAGCAACAACCAGCAGCTTCGGGATTTAGGGATTCTCTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CCA 72 bp GCCATGAATTCCCATGAGGCTGGGCTGCATCATATTTaGCGGCCCGTGGGACACCTGCATCTGGTTTTGAGG +
Preference number: 6 (lower is better)
Translates to: AMNSHEAGLHHI*RPVGHLHLVLR
Trigger: CCTCAAAACCAGATGCAGGTGTCCCACGGGCCGCCAAATATGATGCAGCCCAGCCTCATGGGAATTCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CAA 72 bp CTGGGGTCGAATTCCCTGTGGCTGTTGCTGCTGATGTaGCTGTGGGGGTCTTGCCTGCAACTGTTGTTGCTG +
Preference number: 6 (lower is better)
Translates to: LGSNSLWLLLLM*LWGSCLQLLLL
Trigger: CAGCAACAACAGTTGCAGGCAAGACCCCCACAGCAACATCAGCAGCAACAGCCACAGGGAATTCGACCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CAA 72 bp CCTTTGCCCTTACTAGACGAGACTGGGCTTCGCCGGTaGCCAGAGGACCCTGGACTATTGGTCAAAAGGGGA +
Preference number: 6 (lower is better)
Translates to: PLPLLDETGLRR*PEDPGLLVKRG
Trigger: TCCCCTTTTGACCAATAGTCCAGGGTCCTCTGGCAACCGGCGAAGCCCAGTCTCGTCTAGTAAGGGCAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CAA 90 bp CTGTGGGGGTCTTGCCTGCAACTGTTGTTGCTGCTGTTGCTGTTGTaGCTGCTGCTGCTGCTGCTGCTGCTGTTGTTGTTGTTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: LWGSCLQLLLLLLLL*LLLLLLLLLLLLLL
Trigger: CAGCAGCAACAACAACAACAGCAGCAGCAGCAGCAGCAGCAGCAACAACAGCAACAGCAGCAACAACAGTTGCAGGCAAGACCCCCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CAA 90 bp TTACCTCCAGCTCTGGTCTGGCAACAGAGGCCTGCAGTGCTGTGGTaGAAGTTTCCTTTGAGACTAAATTCTGCGACGGGGCTGGTGGCC +
Preference number: 6 (lower is better)
Translates to: LPPALVWQQRPAVLW*KFPLRLNSATGLVA
Trigger: GGCCACCAGCCCCGTCGCAGAATTTAGTCTCAAAGGAAACTTCAACCACAGCACTGCAGGCCTCTGTTGCCAGACCAGAGCTGGAGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612493.4
ENST00000628752.2
CDS TCA 72 bp CAGCTCTGGATTGGGGCCTGGTGCCATCATGGAAGATaGCACATTTCCACCCGGGGGTATCATAACAGTGGC +
Preference number: 6 (lower is better)
Translates to: QLWIGAWCHHGR*HISTRGYHNSG
Trigger: GCCACTGTTATGATACCCCCGGGTGGAAATGTGTCATCTTCCATGATGGCACCAGGCCCCAATCCAGAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS TCA 72 bp ACAAGGAGGGGAAGGAAGCTGAACAGGGGTGGCTCGTaGGCTAAGGACCAAAGGTCGACCTGTCTGGATGTT +
Preference number: 6 (lower is better)
Translates to: TRRGRKLNRGGS*AKDQRSTCLDV
Trigger: AACATCCAGACAGGTCGACCTTTGGTCCTTAGCTCACGAGCCACCCCTGTTCAGCTTCCTTCCCCTCCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CCA 72 bp ATCTGGTTATGTGGCGCCATCATTTGTGGGCCCTGCTaGGAAAGCATCTGCTTGGGTGGGGTCATCCTTTGG +
Preference number: 6 (lower is better)
Translates to: IWLCGAIICGPC*ESICLGGVILW
Trigger: CCAAAGGATGACCCCACCCAAGCAGATGCTTTCCCAGCAGGGCCCACAAATGATGGCGCCACATAACCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CCA 72 bp CTGGGCTTCGCCGGTTGCCAGAGGACCCTGGACTATTaGTCAAAAGGGGAGAAACCATTGTGGTTGACTGTG +
Preference number: 6 (lower is better)
Translates to: LGFAGCQRTLDY*SKGEKPLWLTV
Trigger: CACAGTCAACCACAATGGTTTCTCCCCTTTTGACCAATAGTCCAGGGTCCTCTGGCAACCGGCGAAGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CCA 72 bp AGACGAGACTGGGCTTCGCCGGTTGCCAGAGGACCCTaGACTATTGGTCAAAAGGGGAGAAACCATTGTGGT +
Preference number: 6 (lower is better)
Translates to: RRDWASPVARGP*TIGQKGRNHCG
Trigger: ACCACAATGGTTTCTCCCCTTTTGACCAATAGTCCAGGGTCCTCTGGCAACCGGCGAAGCCCAGTCTCGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CCA 72 bp GACCACTCTCAACTCTCAGCTTGTAGAGGTCCCTCTTaGGTCCTCCTCTTGTGGCCCTCTCCACACATAGCA +
Preference number: 6 (lower is better)
Translates to: DHSQLSACRGPS*VLLLWPSPHIA
Trigger: TGCTATGTGTGGAGAGGGCCACAAGAGGAGGACCCAAGAGGGACCTCTACAAGCTGAGAGTTGAGAGTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434040.5
ENST00000593786.1
ENST00000628752.2
CDS CCA 72 bp GGTCCTCCTCTTGTGGCCCTCTCCACACATAGCATTTaGTCCTTCATGGGAGCACCAGCTGCTCTTCTCTCT +
Preference number: 6 (lower is better)
Translates to: GPPLVALSTHSI*SFMGAPAALLS
Trigger: AGAGAGAAGAGCAGCTGGTGCTCCCATGAAGGACCAAATGCTATGTGTGGAGAGGGCCACAAGAGGAGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593786.1
CDS CAA 72 bp CTGCTGGGGCTGGCCTTGCATGTTGCTGAGGTTCACTaGAGGAACCCCAGAAGTACCAGCCTGCTGATTGTT +
Preference number: 6 (lower is better)
Translates to: LLGLALHVAEVH*RNPRSTSLLIV
Trigger: AACAATCAGCAGGCTGGTACTTCTGGGGTTCCTCAAGTGAACCTCAGCAACATGCAAGGCCAGCCCCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CAA 90 bp GTCGAATTCCCTGTGGCTGTTGCTGCTGATGTTGCTGTGGGGGTCTaGCCTGCAACTGTTGTTGCTGCTGTTGCTGTTGTTGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: VEFPVAVAADVAVGV*PATVVAAVAVVAAA
Trigger: AGCAGCAGCAACAACAGCAACAGCAGCAACAACAGTTGCAGGCAAGACCCCCACAGCAACATCAGCAGCAACAGCCACAGGGAATTCGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CAA 90 bp CGGAGAGCTGACAGGCTGCTGAAATCCCTGGGGAAGTGGGTTATTTaGAGGTGGCCTTGGTCCCATCTGCTGCTGAGTTTGGTTAACCGT +
Preference number: 6 (lower is better)
Translates to: RRADRLLKSLGKWVI*RWPWSHLLLSLVNR
Trigger: ACGGTTAACCAAACTCAGCAGCAGATGGGACCAAGGCCACCTCAAAATAACCCACTTCCCCAGGGATTTCAGCAGCCTGTCAGCTCTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CAA 90 bp GGATTCAGCCCACTGTTGTTAGGAAAGCTCCCAGGTACAGGGGGATaGGCCAGAGGAGTGGGACTGACCAATACATTTCTCGGCAACTCC +
Preference number: 6 (lower is better)
Translates to: GFSPLLLGKLPGTGG*ARGVGLTNTFLGNS
Trigger: GGAGTTGCCGAGAAATGTATTGGTCAGTCCCACTCCTCTGGCCAATCCCCCTGTACCTGGGAGCTTTCCTAACAACAGTGGGCTGAATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CAA 90 bp AAGGGCCAACAACTGCAACAGAGGGAGGCATCAGGCCAGAGTTGGTaGTCAGTGGGGCTGCAGGAATTGTGCTTGGCTGTGATCCTTTCA +
Preference number: 6 (lower is better)
Translates to: KGQQLQQREASGQSW*SVGLQELCLAVILS
Trigger: TGAAAGGATCACAGCCAAGCACAATTCCTGCAGCCCCACTGACAACCAACTCTGGCCTGATGCCTCCCTCTGTTGCAGTTGTTGGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CAA 90 bp TGTAAAGGGCCAACAACTGCAACAGAGGGAGGCATCAGGCCAGAGTaGGTTGTCAGTGGGGCTGCAGGAATTGTGCTTGGCTGTGATCCT +
Preference number: 6 (lower is better)
Translates to: CKGPTTATEGGIRPE*VVSGAAGIVLGCDP
Trigger: AGGATCACAGCCAAGCACAATTCCTGCAGCCCCACTGACAACCAACTCTGGCCTGATGCCTCCCTCTGTTGCAGTTGTTGGCCCTTTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CAA 90 bp CTAGACGAGACTGGGCTTCGCCGGTTGCCAGAGGACCCTGGACTATaGGTCAAAAGGGGAGAAACCATTGTGGTTGACTGTGAAGAGGGA +
Preference number: 6 (lower is better)
Translates to: LDETGLRRLPEDPGL*VKRGETIVVDCEEG
Trigger: TCCCTCTTCACAGTCAACCACAATGGTTTCTCCCCTTTTGACCAATAGTCCAGGGTCCTCTGGCAACCGGCGAAGCCCAGTCTCGTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS TCA 72 bp GTAAACTGGGGTCGAATTCCCTGTGGCTGTTGCTGCTaGTGTTGCTGTGGGGGTCTTGCCTGCAACTGTTGT +
Preference number: 6 (lower is better)
Translates to: VNWGRIPCGCCC*CCCGGLACNCC
Trigger: ACAACAGTTGCAGGCAAGACCCCCACAGCAACATCAGCAGCAACAGCCACAGGGAATTCGACCCCAGTTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS TCA 72 bp CACCATCATCTGGCCCTGTGGCATAAGCTGGGCCCTTaGAAGGATCATAGGGTTCTGAGGGTTCAAGGTTCC +
Preference number: 6 (lower is better)
Translates to: HHHLALWHKLGP*KDHRVLRVQGS
Trigger: GGAACCTTGAACCCTCAGAACCCTATGATCCTTTCAAGGGCCCAGCTTATGCCACAGGGCCAGATGATGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS TCA 72 bp TCCCAGGTACAGGGGGATTGGCCAGAGGAGTGGGACTaGCCAATACATTTCTCGGCAACTCCACATTCTGCA +
Preference number: 6 (lower is better)
Translates to: SQVQGDWPEEWD*PIHFSATPHSA
Trigger: TGCAGAATGTGGAGTTGCCGAGAAATGTATTGGTCAGTCCCACTCCTCTGGCCAATCCCCCTGTACCTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS TCA 72 bp CACCATGATTGCTTTTTGTGGTCGGTACGGCGGAGATaGGCTCGGAGGGTACCAGAGTGGTTACTATCGAGC +
Preference number: 6 (lower is better)
Translates to: HHDCFLWSVRRR*ARRVPEWLLSS
Trigger: GCTCGATAGTAACCACTCTGGTACCCTCCGAGCTCATCTCCGCCGTACCGACCACAAAAAGCAATCATGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CCA 72 bp GGAGCTCCACTGAAAGGTGCATTGAAAGACATCCCATaGCCTGAGAAGTGGTTTCCCGAGGCACTGTTTCCC +
Preference number: 6 (lower is better)
Translates to: GAPLKGALKDIP*PEKWFPEALFP
Trigger: GGGAAACAGTGCCTCGGGAAACCACTTCTCAGGCCATGGGATGTCTTTCAATGCACCTTTCAGTGGAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CCA 72 bp GGTCCTCCTCTTGTGGCCCTCTCCACACATAGCATTTaGTCCTTCATGGGAGCACCAGCTCTTCTCTCTGAA +
Preference number: 6 (lower is better)
Translates to: GPPLVALSTHSI*SFMGAPALLSE
Trigger: TTCAGAGAGAAGAGCTGGTGCTCCCATGAAGGACCAAATGCTATGTGTGGAGAGGGCCACAAGAGGAGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434040.5
CDS CCA 72 bp GGTCCTCCTCTTGTGGCCCTCTCCACACATAGCATTTaGTCCTTCATGGGAGCACCAGCTTTAGTAGAGCTG +
Preference number: 6 (lower is better)
Translates to: GPPLVALSTHSI*SFMGAPALVEL
Trigger: CAGCTCTACTAAAGCTGGTGCTCCCATGAAGGACCAAATGCTATGTGTGGAGAGGGCCACAAGAGGAGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628752.2
CDS CAA 72 bp GGGATCCTGCTGCATCATGAGCATCATCATCATTTGTaGCTGCTGCTGCTGCTGCTGCTGAGACTGTGGCTG +
Preference number: 6 (lower is better)
Translates to: GILLHHEHHHHL*LLLLLLLRLWL
Trigger: CAGCCACAGTCTCAGCAGCAGCAGCAGCAGCAGCAACAAATGATGATGATGCTCATGATGCAGCAGGATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CAA 72 bp ACTGGGCTTCGCCGGTTGCCAGAGGACCCTGGACTATaGGTCAAAAGGGGAGAAACCATTGTGGTTGACTGT +
Preference number: 6 (lower is better)
Translates to: TGLRRLPEDPGL*VKRGETIVVDC
Trigger: ACAGTCAACCACAATGGTTTCTCCCCTTTTGACCAATAGTCCAGGGTCCTCTGGCAACCGGCGAAGCCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CAA 90 bp CTGTTGCTGTTGTTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTTGTaGTTGCTGCTGCTGCTGCAGCTGGGGAAAATTAGCTGGGTTCAT +
Preference number: 6 (lower is better)
Translates to: LLLLLLLLLLLLLLL*LLLLLQLGKISWVH
Trigger: ATGAACCCAGCTAATTTTCCCCAGCTGCAGCAGCAGCAGCAACAACAACAACAGCAGCAGCAGCAGCAGCAGCAGCAACAACAGCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CAA 90 bp TTACCTCCAGCTCTGGTCTGGCAACAGAGGCCTGCAGTGCTGTGGTaGAAGTTTCCTTTGAGACTAAATTCTGCGACGGGGCTATGCTGG +
Preference number: 6 (lower is better)
Translates to: LPPALVWQQRPAVLW*KFPLRLNSATGLCW
Trigger: CCAGCATAGCCCCGTCGCAGAATTTAGTCTCAAAGGAAACTTCAACCACAGCACTGCAGGCCTCTGTTGCCAGACCAGAGCTGGAGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS TCA 72 bp TGCATCACCATGAAGTTAGGTGGCACATTTCCCTGTTaGACCATAGGATTCCGACCCGGAGAGCTGACAGGC +
Preference number: 6 (lower is better)
Translates to: CITMKLGGTFPC*TIGFRPGELTG
Trigger: GCCTGTCAGCTCTCCGGGTCGGAATCCTATGGTTCAACAGGGAAATGTGCCACCTAACTTCATGGTGATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS TCA 72 bp TCCAAGTTAATTCCTTGTTCTCCAGGCAACGGTGGCTaGTCAGCCTCTTCCAGACCAGCTGGGCGAGTATCT +
Preference number: 6 (lower is better)
Translates to: SKLIPCSPGNGG*SASSRPAGRVS
Trigger: AGATACTCGCCCAGCTGGTCTGGAAGAGGCTGATCAGCCACCGTTGCCTGGAGAACAAGGAATTAACTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
ENST00000628752.2
CDS TCA 72 bp TGTAATGAACTGAGGCCGGGCATTAGACTGAGCAGCTaGCTGTCCCTCAGAAACCATAACCTTGCTACCCGC +
Preference number: 6 (lower is better)
Translates to: CNELRPGIRLSS*LSLRNHNLATR
Trigger: GCGGGTAGCAAGGTTATGGTTTCTGAGGGACAGTCAGCTGCTCAGTCTAATGCCCGGCCTCAGTTCATTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS TCA 72 bp GCTTCGAGATTCCCAGCCATGCAGGTGATGCAAATGTaGACGCCAGACTCATGGAGGGTAGGCATGTGGTTT +
Preference number: 6 (lower is better)
Translates to: ASRFPAMQVMQM*TPDSWRVGMWF
Trigger: AAACCACATGCCTACCCTCCATGAGTCTGGCGTTCACATTTGCATCACCTGCATGGCTGGGAATCTCGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626057.1
CDS GCA 72 bp TGCTGCTGCTGCTGCTGCTGTTGTTGTTGTTGCTGCTaGTGCTGCAGCTGGGGAAAATTAGCTGGGTTCATT +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*CCSWGKLAGFI
Trigger: AATGAACCCAGCTAATTTTCCCCAGCTGCAGCAGCAGCAGCAACAACAACAACAGCAGCAGCAGCAGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS GCA 72 bp GGATGTAAACTCTGTGGCCCCTGGTTTGGTGGTTGCTaGTGCATCACCATGAAGTTAGGTGGCACATTTCCC +
Preference number: 6 (lower is better)
Translates to: GCKLCGPWFGGC*CITMKLGGTFP
Trigger: GGGAAATGTGCCACCTAACTTCATGGTGATGCAGCAGCAACCACCAAACCAGGGGCCACAGAGTTTACATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS GCA 72 bp GGACCCAGGACTAGACCTGCGACTGTTGCTTGGACTTaGCCGTTTTGTTGCTCCAGAATTAGACTGCTTTCC +
Preference number: 6 (lower is better)
Translates to: GPRTRPATVAWT*PFCCSRIRLLS
Trigger: GGAAAGCAGTCTAATTCTGGAGCAACAAAACGGGCAAGTCCAAGCAACAGTCGCAGGTCTAGTCCTGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CCA 72 bp CTGTCCCGTAAACTGCACCATATTTCCTTGCATGTTTaGAGTTGGTCCCCTCATTATCTGGGCTGGTCCCGG +
Preference number: 6 (lower is better)
Translates to: LSRKLHHISLHV*SWSPHYLGWSR
Trigger: CCGGGACCAGCCCAGATAATGAGGGGACCAACTCCAAACATGCAAGGAAATATGGTGCAGTTTACGGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CCA 72 bp CCTACTGGACCCAGGACTAGACCTGCGACTGTTGCTTaGACTTGCCCGTTTTGTTGCTCCAGAATTAGACTG +
Preference number: 6 (lower is better)
Translates to: PTGPRTRPATVA*TCPFCCSRIRL
Trigger: CAGTCTAATTCTGGAGCAACAAAACGGGCAAGTCCAAGCAACAGTCGCAGGTCTAGTCCTGGGTCCAGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CCA 72 bp TTTGTCCACTTTTCCTTTGCCCTTACTAGACGAGACTaGGCTTCGCCGGTTGCCAGAGGACCCTGGACTATT +
Preference number: 6 (lower is better)
Translates to: FVHFSFALTRRD*ASPVARGPWTI
Trigger: AATAGTCCAGGGTCCTCTGGCAACCGGCGAAGCCCAGTCTCGTCTAGTAAGGGCAAAGGAAAAGTGGACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CAA 72 bp CTGCATCACCATGAAGTTAGGTGGCACATTTCCCTGTaGAACCATAGGATTCCGACCCGGAGAGCTGACAGG +
Preference number: 6 (lower is better)
Translates to: LHHHEVRWHISL*NHRIPTRRADR
Trigger: CCTGTCAGCTCTCCGGGTCGGAATCCTATGGTTCAACAGGGAAATGTGCCACCTAACTTCATGGTGATGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CAA 72 bp CCACTGTTGTTAGGAAAGCTCCCAGGTACAGGGGGATaGGCCAGAGGAGTGGGACTGACCAATACATTTCTC +
Preference number: 6 (lower is better)
Translates to: PLLLGKLPGTGG*ARGVGLTNTFL
Trigger: GAGAAATGTATTGGTCAGTCCCACTCCTCTGGCCAATCCCCCTGTACCTGGGAGCTTTCCTAACAACAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CAA 72 bp GCGCAGTTCACACAAACAAACCACGATGCCTTGAGGTaGAGACTGGGAGGTATGTTAAGGGAGCATGGAGCC +
Preference number: 6 (lower is better)
Translates to: AQFTQTNHDALR*RLGGMLREHGA
Trigger: GGCTCCATGCTCCCTTAACATACCTCCCAGTCTCAACCTCAAGGCATCGTGGTTTGTTTGTGTGAACTGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434040.5
ENST00000593786.1
CDS CAA 90 bp TTGCTGTTGTTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTTGTTGTaGCTGCTGCTGCTGCAGCTGGGGAAAATTAGCTGGGTTCATTTG +
Preference number: 6 (lower is better)
Translates to: LLLLLLLLLLLLLLL*LLLLQLGKISWVHL
Trigger: CAAATGAACCCAGCTAATTTTCCCCAGCTGCAGCAGCAGCAGCAACAACAACAACAGCAGCAGCAGCAGCAGCAGCAGCAACAACAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CAA 90 bp TGGTTGCTGCTGCATCACCATGAAGTTAGGTGGCACATTTCCCTGTaGAACCATAGGATTCCGACCCGGAGAGCTGACAGGCTGCTGAAA +
Preference number: 6 (lower is better)
Translates to: WLLLHHHEVRWHISL*NHRIPTRRADRLLK
Trigger: TTTCAGCAGCCTGTCAGCTCTCCGGGTCGGAATCCTATGGTTCAACAGGGAAATGTGCCACCTAACTTCATGGTGATGCAGCAGCAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CAA 90 bp GGTGTTCACCTGAGGGCTAGCCTCATCTGGATTCAATTCTTTCACTaGCTGCACAGGGGGATGAGAAGGGACAACTGGAGAAGACGTACA +
Preference number: 6 (lower is better)
Translates to: GVHLRASLIWIQFFH*LHRGMRRDNWRRRT
Trigger: TGTACGTCTTCTCCAGTTGTCCCTTCTCATCCCCCTGTGCAGCAAGTGAAAGAATTGAATCCAGATGAGGCTAGCCCTCAGGTGAACACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS TCA 72 bp ACACCCCCAACTGCAGCCACAGACACAGTAGAATTCTaGGGATTCAGCCCACTGTTGTTAGGAAAGCTCCCA +
Preference number: 6 (lower is better)
Translates to: TPPTAATDTVEF*GFSPLLLGKLP
Trigger: TGGGAGCTTTCCTAACAACAGTGGGCTGAATCCTCAGAATTCTACTGTGTCTGTGGCTGCAGTTGGGGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS TCA 72 bp CAAGGTGTTGGCCAGGTGTGTCCTCATATGGAGGCTTaGCTAGAGAAAGATCAACTTCCAAGCTCCCTCTGG +
Preference number: 6 (lower is better)
Translates to: QGVGQVCPHMEA*LEKDQLPSSLW
Trigger: CCAGAGGGAGCTTGGAAGTTGATCTTTCTCTAGTCAAGCCTCCATATGAGGACACACCTGGCCAACACCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434040.5
CDS TCA 72 bp GCACATCTGGGTTCTCTGCTTGGGATCCCACAAGTCTaGAATCAAGGTGTTGGCCAGGTGTGTCCTCATATG +
Preference number: 6 (lower is better)
Translates to: AHLGSLLGIPQV*NQGVGQVCPHM
Trigger: CATATGAGGACACACCTGGCCAACACCTTGATTTCAGACTTGTGGGATCCCAAGCAGAGAACCCAGATGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434040.5
CDS GCA 72 bp TGCTGCTGCTGCTGTTGTTGTTGTTGCTGCTGCTGCTaGAGCTGGGGAAAATTAGCTGGGTTCATTTGTCTG +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*SWGKLAGFICL
Trigger: CAGACAAATGAACCCAGCTAATTTTCCCCAGCTGCAGCAGCAGCAGCAACAACAACAACAGCAGCAGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS GCA 72 bp TGCTGCTGCTGCTGCTGTTGTTGTTGTTGCTGCTGCTaGTGCAGCTGGGGAAAATTAGCTGGGTTCATTTGT +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*CSWGKLAGFIC
Trigger: ACAAATGAACCCAGCTAATTTTCCCCAGCTGCAGCAGCAGCAGCAACAACAACAACAGCAGCAGCAGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS GCA 72 bp TGTAAACTCTGTGGCCCCTGGTTTGGTGGTTGCTGCTaGATCACCATGAAGTTAGGTGGCACATTTCCCTGT +
Preference number: 6 (lower is better)
Translates to: CKLCGPWFGGCC*ITMKLGGTFPC
Trigger: ACAGGGAAATGTGCCACCTAACTTCATGGTGATGCAGCAGCAACCACCAAACCAGGGGCCACAGAGTTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CCA 72 bp CTGCAAACTCTTCATCTGAGGAGCTGTGAACTGGCCTaGGTTGCTCATCTGAGGAAAGTTTGTGTGGGCTTG +
Preference number: 6 (lower is better)
Translates to: LQTLHLRSCELA*VAHLRKVCVGL
Trigger: CAAGCCCACACAAACTTTCCTCAGATGAGCAACCCAGGCCAGTTCACAGCTCCTCAGATGAAGAGTTTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CCA 72 bp AAATCCCTGGGGAAGTGGGTTATTTTGAGGTGGCCTTaGTCCCATCTGCTGCTGAGTTTGGTTAACCGTTGG +
Preference number: 6 (lower is better)
Translates to: KSLGKWVILRWP*SHLLLSLVNRW
Trigger: CCAACGGTTAACCAAACTCAGCAGCAGATGGGACCAAGGCCACCTCAAAATAACCCACTTCCCCAGGGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CCA 72 bp ATTCCTCCTAGGCCTGGATGTAAACTCTGTGGCCCCTaGTTTGGTGGTTGCTGCTGCATCACCATGAAGTTA +
Preference number: 6 (lower is better)
Translates to: IPPRPGCKLCGP*FGGCCCITMKL
Trigger: TAACTTCATGGTGATGCAGCAGCAACCACCAAACCAGGGGCCACAGAGTTTACATCCAGGCCTAGGAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CCA 72 bp TTGCATGTTTGGAGTTGGTCCCCTCATTATCTGGGCTaGTCCCGGCATGACATTGGACTGGTTCTGAGTGTT +
Preference number: 6 (lower is better)
Translates to: LHVWSWSPHYLG*SRHDIGLVLSV
Trigger: AACACTCAGAACCAGTCCAATGTCATGCCGGGACCAGCCCAGATAATGAGGGGACCAACTCCAAACATGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CCA 72 bp CGTAAACTGCACCATATTTCCTTGCATGTTTGGAGTTaGTCCCCTCATTATCTGGGCTGGTCCCGGCATGAC +
Preference number: 6 (lower is better)
Translates to: RKLHHISLHVWS*SPHYLGWSRHD
Trigger: GTCATGCCGGGACCAGCCCAGATAATGAGGGGACCAACTCCAAACATGCAAGGAAATATGGTGCAGTTTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CCA 72 bp CACATGCTGCATGAGTTGAGGAGGCATCTGCTGAAGTaGCCTCTGTTCAACTGGTTGAGAAGGATAACCTGG +
Preference number: 6 (lower is better)
Translates to: HMLHELRRHLLK*PLFNWLRRITW
Trigger: CCAGGTTATCCTTCTCAACCAGTTGAACAGAGGCCACTTCAGCAGATGCCTCCTCAACTCATGCAGCATGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CCA 72 bp AAGTGTCCCTGTGCCCAGCAGGATTCTCACCCTACATaGTATGGAGACAAAGCTGGCACAGATACAACTTGG +
Preference number: 6 (lower is better)
Translates to: KCPCAQQDSHPT*YGDKAGTDTTW
Trigger: CCAAGTTGTATCTGTGCCAGCTTTGTCTCCATACCATGTAGGGTGAGAATCCTGCTGGGCACAGGGACACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471897.1
CDS CAA 72 bp CTGCTGCTGCAGCTGGGGAAAATTAGCTGGGTTCATTaGTCTGTTCACAGAGACAGGCTGCATTGGGTGATG +
Preference number: 6 (lower is better)
Translates to: LLLQLGKISWVH*SVHRDRLHWVM
Trigger: CATCACCCAATGCAGCCTGTCTCTGTGAACAGACAAATGAACCCAGCTAATTTTCCCCAGCTGCAGCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CAA 72 bp TTTGGGATCCTGCTGCATCATGAGCATCATCATCATTaGTTGCTGCTGCTGCTGCTGCTGCTGAGACTGTGG +
Preference number: 6 (lower is better)
Translates to: FGILLHHEHHHH*LLLLLLLLRLW
Trigger: CCACAGTCTCAGCAGCAGCAGCAGCAGCAGCAACAAATGATGATGATGCTCATGATGCAGCAGGATCCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CAA 72 bp TACGATGTCCATTTTCCACACTTTCAGAGGCCACAGTaGGCTCTTCAGTTCGGGAGTTTCTTCGGCCTGGGA +
Preference number: 6 (lower is better)
Translates to: YDVHFPHFQRPQ*ALQFGSFFGLG
Trigger: TCCCAGGCCGAAGAAACTCCCGAACTGAAGAGCCAACTGTGGCCTCTGAAAGTGTGGAAAATGGACATCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000471897.1
ENST00000612493.4
ENST00000628752.2
CDS CAA 90 bp GCCACAGTTGGCTCTTCAGTTCGGGAGTTTCTTCGGCCTGGGATTTaGGACTTTTCAACTATCTCTTTGGGCTCACTGCTTTGTCCAGAG +
Preference number: 6 (lower is better)
Translates to: ATVGSSVREFLRPGI*DFSTISLGSLLCPE
Trigger: CTCTGGACAAAGCAGTGAGCCCAAAGAGATAGTTGAAAAGTCCAAAATCCCAGGCCGAAGAAACTCCCGAACTGAAGAGCCAACTGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000471897.1
ENST00000612493.4
ENST00000628752.2
CDS CAA 90 bp CCAGCTCTTCTCTCTGAAGTGAATCCTGTCCTGATCATCACCTCCTaGCTGACAGGGCCATTAAGCGCAGTTCACACAAACAAACCACGA +
Preference number: 6 (lower is better)
Translates to: PALLSEVNPVLIITS*LTGPLSAVHTNKPR
Trigger: TCGTGGTTTGTTTGTGTGAACTGCGCTTAATGGCCCTGTCAGCAAGGAGGTGATGATCAGGACAGGATTCACTTCAGAGAGAAGAGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434040.5
CDS CAA 90 bp GCTGCTCTTCTCTCTGAAGTGAATCCTGTCCTGATCATCACCTCCTaGCTGACAGGGCCATTAAGCGCAGTTCACACAAACAAACCACGA +
Preference number: 6 (lower is better)
Translates to: AALLSEVNPVLIITS*LTGPLSAVHTNKPR
Trigger: TCGTGGTTTGTTTGTGTGAACTGCGCTTAATGGCCCTGTCAGCAAGGAGGTGATGATCAGGACAGGATTCACTTCAGAGAGAAGAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593786.1
CDS TCA 72 bp ACCACTTGCCATAGGAAATCCCGCCTCCATCCTAACTaGATTTCCAGCTCCCATGGGTCCATTCATTCTCAC +
Preference number: 6 (lower is better)
Translates to: TTCHRKSRLHPN*ISSSHGSIHSH
Trigger: GTGAGAATGAATGGACCCATGGGAGCTGGAAATTCAGTTAGGATGGAGGCGGGATTTCCTATGGCAAGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS TCA 72 bp TTTCCTCAACTTGCCAGGCGGGCATCTCAGGTTCAATaGGGACTAGATAGGAATTCCATCCACAAGGCTGTG +
Preference number: 6 (lower is better)
Translates to: FPQLARRASQVQ*GLDRNSIHKAV
Trigger: CACAGCCTTGTGGATGGAATTCCTATCTAGTCCTCATTGAACCTGAGATGCCCGCCTGGCAAGTTGAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593786.1
CDS TCA 72 bp CTTCATGGGAGCACCAGCTTTAGTAGAGCTGGAGGCTaGAGCAGGTCGAGAAGATCGTTTACGATGTCCATT +
Preference number: 6 (lower is better)
Translates to: LHGSTSFSRAGG*SRSRRSFTMSI
Trigger: AATGGACATCGTAAACGATCTTCTCGACCTGCTTCAGCCTCCAGCTCTACTAAAGCTGGTGCTCCCATGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628752.2
CDS GCA 72 bp GCATTTACCTCCAGCTCTGGTCTGGCAACAGAGGCCTaGAGTGCTGTGGTTGAAGTTTCCTTTGAGACTAAA +
Preference number: 6 (lower is better)
Translates to: AFTSSSGLATEA*SAVVEVSFETK
Trigger: TTTAGTCTCAAAGGAAACTTCAACCACAGCACTGCAGGCCTCTGTTGCCAGACCAGAGCTGGAGGTAAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000628752.2
CDS GCA 72 bp GAGGTGAGGGAGCAAGTATGTACATTTTCCTCAACTTaGCAGGCGGGCATCTCAGGTTCAATGAGGACTAGA +
Preference number: 6 (lower is better)
Translates to: EVREQVCTFSST*QAGISGSMRTR
Trigger: TCTAGTCCTCATTGAACCTGAGATGCCCGCCTGGCAAGTTGAGGAAAATGTACATACTTGCTCCCTCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593786.1
CDS CAA 72 bp CACCTTGAGTTGCTGAAAGGGGCGATGGTCCAGGTTTaGGCCCTGTCATCATTAACTGATTCTGGGGAAGTA +
Preference number: 6 (lower is better)
Translates to: HLELLKGAMVQV*ALSSLTDSGEV
Trigger: TACTTCCCCAGAATCAGTTAATGATGACAGGGCCAAAACCTGGACCATCGCCCCTTTCAGCAACTCAAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CAA 72 bp CTCTCTGAAGTGAATCCTGTCCTGATCATCACCTCCTaGCTGACAGGGCCATTAAGCGCAGTTCACACAAAC +
Preference number: 6 (lower is better)
Translates to: LSEVNPVLIITS*LTGPLSAVHTN
Trigger: GTTTGTGTGAACTGCGCTTAATGGCCCTGTCAGCAAGGAGGTGATGATCAGGACAGGATTCACTTCAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434040.5
ENST00000593786.1
ENST00000626057.1
CDS CAA 72 bp TCAAGGTGTTGGCCAGGTGTGTCCTCATATGGAGGCTaGACTAGAGAAAGATCAACTTCCAAGCTCCCTCTG +
Preference number: 6 (lower is better)
Translates to: SRCWPGVSSYGG*TRERSTSKLPL
Trigger: CAGAGGGAGCTTGGAAGTTGATCTTTCTCTAGTCAAGCCTCCATATGAGGACACACCTGGCCAACACCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434040.5
CDS CAA 72 bp CTCCCTTCGCTAGTAGGTGTTGGTTTTTCCCCTAGTTaGTTCTTTCACTGTGGGTGTAGCCCTTCAAGGGTC +
Preference number: 6 (lower is better)
Translates to: LPSLVGVGFSPS*FFHCGCSPSRV
Trigger: GACCCTTGAAGGGCTACACCCACAGTGAAAGAACAAACTAGGGGAAAAACCAACACCTACTAGCGAAGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626057.1
CDS CAA 90 bp CACAATTCTCTAAGTCAGAAGTCTAGGCACATCTGGGTTCTCTGCTaGGGATCCCACAAGTCTGAAATCAAGGTGTTGGCCAGGTGTGTC +
Preference number: 6 (lower is better)
Translates to: HNSLSQKSRHIWVLC*GSHKSEIKVLARCV
Trigger: GACACACCTGGCCAACACCTTGATTTCAGACTTGTGGGATCCCAAGCAGAGAACCCAGATGTGCCTAGACTTCTGACTTAGAGAATTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434040.5
CDS TCA 72 bp ATGGGTCCATTCATTCTCACATCTTGGCTTCGGTTCTaGGCCAAAGCCAGGTTAATAGCACCTTCCCCTTCA +
Preference number: 6 (lower is better)
Translates to: MGPFILTSWLRF*AKARLIAPSPS
Trigger: TGAAGGGGAAGGTGCTATTAACCTGGCTTTGGCTCAGAACCGAAGCCAAGATGTGAGAATGAATGGACCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS TCA 72 bp GGCGATGGTCCAGGTTTTGGCCCTGTCATCATTAACTaGTTCTGGGGAAGTACTACATGTGAAGGCATGTTG +
Preference number: 6 (lower is better)
Translates to: GDGPGFGPVIIN*FWGSTTCEGML
Trigger: CAACATGCCTTCACATGTAGTACTTCCCCAGAATCAGTTAATGATGACAGGGCCAAAACCTGGACCATCGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS TCA 72 bp CACCGCACTGGTTATGTCTTTAGTAGAGCTGGAGGCTaGAGCAGGTCGAGAAGATCGTTTACGATGTCCATT +
Preference number: 6 (lower is better)
Translates to: HRTGYVFSRAGG*SRSRRSFTMSI
Trigger: AATGGACATCGTAAACGATCTTCTCGACCTGCTTCAGCCTCCAGCTCTACTAAAGACATAACCAGTGCGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000471897.1
ENST00000612493.4
CDS GCA 72 bp CCTGACATCTGTCCCGTAAACTGCACCATATTTCCTTaGATGTTTGGAGTTGGTCCCCTCATTATCTGGGCT +
Preference number: 6 (lower is better)
Translates to: PDICPVNCTIFP*MFGVGPLIIWA
Trigger: AGCCCAGATAATGAGGGGACCAACTCCAAACATGCAAGGAAATATGGTGCAGTTTACGGGACAGATGTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS GCA 72 bp TCTGCGGGCTCTCCTGATAGACCATTTTCCTTGAATTaGTTCCCAAGGGAGTATTCACAGGCATTGGCATTC +
Preference number: 6 (lower is better)
Translates to: SAGSPDRPFSLN*FPREYSQALAF
Trigger: GAATGCCAATGCCTGTGAATACTCCCTTGGGAAGCAATTCAAGGAAAATGGTCTATCAGGAGAGCCCGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CCA 72 bp CACAGTTGGCTCTTCAGTTCGGGAGTTTCTTCGGCCTaGGATTTTGGACTTTTCAACTATCTCTTTGGGCTC +
Preference number: 6 (lower is better)
Translates to: HSWLFSSGVSSA*DFGLFNYLFGL
Trigger: GAGCCCAAAGAGATAGTTGAAAAGTCCAAAATCCCAGGCCGAAGAAACTCCCGAACTGAAGAGCCAACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000471897.1
ENST00000612493.4
ENST00000628752.2
CDS CCA 72 bp ACCATATTAGCAAGGCCCTGTTTTCTCACTTTCTGTTaGCAGGGGACCACTCTCAACTCTCAGCTTGTAGAG +
Preference number: 6 (lower is better)
Translates to: TILARPCFLTFC*QGTTLNSQLVE
Trigger: CTCTACAAGCTGAGAGTTGAGAGTGGTCCCCTGCCAACAGAAAGTGAGAAAACAGGGCCTTGCTAATATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434040.5
CDS CAA 72 bp ATTTCCAGCTCCCATGGGTCCATTCATTCTCACATCTaGGCTTCGGTTCTGAGCCAAAGCCAGGTTAATAGC +
Preference number: 6 (lower is better)
Translates to: ISSSHGSIHSHI*ASVLSQSQVNS
Trigger: GCTATTAACCTGGCTTTGGCTCAGAACCGAAGCCAAGATGTGAGAATGAATGGACCCATGGGAGCTGGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
CDS CAA 72 bp GACTGTCCCTCAGAAACCATAACCTTGCTACCCGCATaGGGCATTGTGACAACTGTTGACATCAATGCAGAC +
Preference number: 6 (lower is better)
Translates to: DCPSETITLLPA*GIVTTVDINAD
Trigger: GTCTGCATTGATGTCAACAGTTGTCACAATGCCCAATGCGGGTAGCAAGGTTATGGTTTCTGAGGGACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CAA 72 bp GGCTCTTCAGTTCGGGAGTTTCTTCGGCCTGGGATTTaGGACTTTTCAACTATCTCTTTGGGCTCACTGCTT +
Preference number: 6 (lower is better)
Translates to: GSSVREFLRPGI*DFSTISLGSLL
Trigger: AAGCAGTGAGCCCAAAGAGATAGTTGAAAAGTCCAAAATCCCAGGCCGAAGAAACTCCCGAACTGAAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000471897.1
ENST00000612493.4
ENST00000628752.2
CDS CAA 72 bp GACCATATTAGCAAGGCCCTGTTTTCTCACTTTCTGTaGGCAGGGGACCACTCTCAACTCTCAGCTTGTAGA +
Preference number: 6 (lower is better)
Translates to: DHISKALFSHFL*AGDHSQLSACR
Trigger: TCTACAAGCTGAGAGTTGAGAGTGGTCCCCTGCCAACAGAAAGTGAGAAAACAGGGCCTTGCTAATATGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434040.5
CDS CAA 90 bp AAGATCGTTTACGATGTCCATTTTCCACACTTTCAGAGGCCACAGTaGGCTCTTCAGTTCGGGAGTTTCTTCGGCCTGGGATTTTGGACT +
Preference number: 6 (lower is better)
Translates to: KIVYDVHFPHFQRPQ*ALQFGSFFGLGFWT
Trigger: AGTCCAAAATCCCAGGCCGAAGAAACTCCCGAACTGAAGAGCCAACTGTGGCCTCTGAAAGTGTGGAAAATGGACATCGTAAACGATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000471897.1
ENST00000612493.4
ENST00000628752.2
CDS CAA 90 bp AGTCTGAAATCAAGGTGTTGGCCAGGTGTGTCCTCATATGGAGGCTaGACTAGAGAAAGATCAACTTCCAAGCTCCCTCTGGATGTTGGA +
Preference number: 6 (lower is better)
Translates to: SLKSRCWPGVSSYGG*TRERSTSKLPLDVG
Trigger: TCCAACATCCAGAGGGAGCTTGGAAGTTGATCTTTCTCTAGTCAAGCCTCCATATGAGGACACACCTGGCCAACACCTTGATTTCAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434040.5
CDS CAA 90 bp ATGTCTCTTCTCTCTGAAGTGAATCCTGTCCTGATCATCACCTCCTaGCTGACAGGGCCATTAAGCGCAGTTCACACAAACAAACCACGA +
Preference number: 6 (lower is better)
Translates to: MSLLSEVNPVLIITS*LTGPLSAVHTNKPR
Trigger: TCGTGGTTTGTTTGTGTGAACTGCGCTTAATGGCCCTGTCAGCAAGGAGGTGATGATCAGGACAGGATTCACTTCAGAGAGAAGAGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626057.1
CDS CAA 90 bp CTTAACGATGTTGGTGCTTCCCTCATAGCAGGAGACACCAAATTTTaGTTCTCTTCGACACTGGGAAGTTTGTTAGGATCCGAAGGCTGC +
Preference number: 6 (lower is better)
Translates to: LNDVGASLIAGDTKF*FSSTLGSLLGSEGC
Trigger: GCAGCCTTCGGATCCTAACAAACTTCCCAGTGTCGAAGAGAACAAAAATTTGGTGTCTCCTGCTATGAGGGAAGCACCAACATCGTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS GCA 72 bp AGACCTGCGACTGTTGCTTGGACTTGCCCGTTTTGTTaGTCCAGAATTAGACTGCTTTCCAGAATTCACTAC +
Preference number: 6 (lower is better)
Translates to: RPATVAWTCPFC*SRIRLLSRIHY
Trigger: GTAGTGAATTCTGGAAAGCAGTCTAATTCTGGAGCAACAAAACGGGCAAGTCCAAGCAACAGTCGCAGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CCA 72 bp GCTCACAATTCTCTAAGTCAGAAGTCTAGGCACATCTaGGTTCTCTGCTTGGGATCCCACAAGTCTGAAATC +
Preference number: 6 (lower is better)
Translates to: AHNSLSQKSRHI*VLCLGSHKSEI
Trigger: GATTTCAGACTTGTGGGATCCCAAGCAGAGAACCCAGATGTGCCTAGACTTCTGACTTAGAGAATTGTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434040.5
CDS CAA 90 bp TTGTTTACCCCAAAATGGCCTGCAGATATGTCACTCTGCAATAAGTaGACCAACAATGGGCTCGTTAGCGTGACATCCTTATTGACTGGG +
Preference number: 6 (lower is better)
Translates to: LFTPKWPADMSLCNK*TNNGLVSVTSLLTG
Trigger: CCCAGTCAATAAGGATGTCACGCTAACGAGCCCATTGTTGGTCAACTTATTGCAGAGTGACATATCTGCAGGCCATTTTGGGGTAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
ENST00000628752.2
CDS CAA 90 bp TTAGAAGAAGACAGATCCTGCAGTGTGGGAATGACAGATGCTTTTTaGAGGTCCTCCCCAGAAACTACTGGAGGTGTTACTTCCAGATCT +
Preference number: 6 (lower is better)
Translates to: LEEDRSCSVGMTDAF*RSSPETTGGVTSRS
Trigger: AGATCTGGAAGTAACACCTCCAGTAGTTTCTGGGGAGGACCTCAAAAAAGCATCTGTCATTCCCACACTGCAGGATCTGTCTTCTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CAA 90 bp AAGTATCAAGTCGCAGTCCTGCTTGTTTACTTGGATTTTCTTCGCTaGGATTGCACCGCACTGGTTATGTCTTTAGTAGAGCTGGAGGCT +
Preference number: 6 (lower is better)
Translates to: KYQVAVLLVYLDFLR*DCTALVMSLVELEA
Trigger: AGCCTCCAGCTCTACTAAAGACATAACCAGTGCGGTGCAATCCAAGCGAAGAAAATCCAAGTAAACAAGCAGGACTGCGACTTGATACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000471897.1
ENST00000612493.4
CDS TCA 72 bp TGGAGGATGGACATTTTGAGAGACTGGAAGCCTAACTaGTTTGGGATCCTGCTGCATCATGAGCATCATCAT +
Preference number: 6 (lower is better)
Translates to: WRMDILRDWKPN*FGILLHHEHHH
Trigger: ATGATGATGCTCATGATGCAGCAGGATCCCAAATCAGTTAGGCTTCCAGTCTCTCAAAATGTCCATCCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS TCA 72 bp GGCAACTCCACATTCTGCAATAGGGCTGCATTTGTCTaGGAGGCCAGAGTAAGTTTAGGGGCTTTTGAATTT +
Preference number: 6 (lower is better)
Translates to: GNSTFCNRAAFV*EARVSLGAFEF
Trigger: AAATTCAAAAGCCCCTAAACTTACTCTGGCCTCTCAGACAAATGCAGCCCTATTGCAGAATGTGGAGTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS TCA 72 bp TTGTTAGGATCCGAAGGCTGCCCATCCTTTTTGGACTaGTCTTCAGGGACAACCATTTTAACTTCTTGGGCA +
Preference number: 6 (lower is better)
Translates to: LLGSEGCPSFLD*SSGTTILTSWA
Trigger: TGCCCAAGAAGTTAAAATGGTTGTCCCTGAAGATCAGTCCAAAAAGGATGGGCAGCCTTCGGATCCTAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS TCA 72 bp ATTGTCACATTGGGAGCTCCAGAGTTGTCAAGAAGTTaGCTTAACGATGTTGGTGCTTCCCTCATAGCAGGA +
Preference number: 6 (lower is better)
Translates to: IVTLGAPELSRS*LNDVGASLIAG
Trigger: TCCTGCTATGAGGGAAGCACCAACATCGTTAAGTCAACTTCTTGACAACTCTGGAGCTCCCAATGTGACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS GCA 72 bp GTCCTGCTTGTTTACTTGGATTTTCTTCGCTTGGATTaGACCGCACTGGTTATGTCTTTAGTAGAGCTGGAG +
Preference number: 6 (lower is better)
Translates to: VLLVYLDFLRLD*TALVMSLVELE
Trigger: CTCCAGCTCTACTAAAGACATAACCAGTGCGGTGCAATCCAAGCGAAGAAAATCCAAGTAAACAAGCAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000471897.1
ENST00000612493.4
CDS CCA 72 bp GCAGGATTCTCACCCTACATGGTATGGAGACAAAGCTaGCACAGATACAACTTGGTTTGTTTGGGACATAAG +
Preference number: 6 (lower is better)
Translates to: AGFSPYMVWRQS*HRYNLVCLGHK
Trigger: CTTATGTCCCAAACAAACCAAGTTGTATCTGTGCCAGCTTTGTCTCCATACCATGTAGGGTGAGAATCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471897.1
CDS CAA 72 bp GACACCAAATTTTTGTTCTCTTCGACACTGGGAAGTTaGTTAGGATCCGAAGGCTGCCCATCCTTTTTGGAC +
Preference number: 6 (lower is better)
Translates to: DTKFLFSSTLGS*LGSEGCPSFLD
Trigger: GTCCAAAAAGGATGGGCAGCCTTCGGATCCTAACAAACTTCCCAGTGTCGAAGAGAACAAAAATTTGGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CAA 72 bp GTTGGTGCTTCCCTCATAGCAGGAGACACCAAATTTTaGTTCTCTTCGACACTGGGAAGTTTGTTAGGATCC +
Preference number: 6 (lower is better)
Translates to: VGASLIAGDTKF*FSSTLGSLLGS
Trigger: GGATCCTAACAAACTTCCCAGTGTCGAAGAGAACAAAAATTTGGTGTCTCCTGCTATGAGGGAAGCACCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CAA 90 bp CCTGTAACTTTCTTACATGCCTTGGTCAACAAAATTTGGCCAATTTaGTCCACTTTTCCTTTGCCCTTACTAGACGAGACTGGGCTTCGC +
Preference number: 6 (lower is better)
Translates to: PVTFLHALVNKIWPI*STFPLPLLDETGLR
Trigger: GCGAAGCCCAGTCTCGTCTAGTAAGGGCAAAGGAAAAGTGGACAAAATTGGCCAAATTTTGTTGACCAAGGCATGTAAGAAAGTTACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CAA 72 bp ATTTCCAAGTATCAAGTCGCAGTCCTGCTTGTTTACTaGGATTTTCTTCGCTTGGATTGCACCGCACTGGTT +
Preference number: 6 (lower is better)
Translates to: ISKYQVAVLLVY*DFLRLDCTALV
Trigger: AACCAGTGCGGTGCAATCCAAGCGAAGAAAATCCAAGTAAACAAGCAGGACTGCGACTTGATACTTGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000471897.1
ENST00000612493.4
CDS CAA 72 bp TCACACACATTTCCAAGTATCAAGTCGCAGTCCTGCTaGTTTACTTGGATTTTCTTCGCTTGGATTGCACCG +
Preference number: 6 (lower is better)
Translates to: SHTFPSIKSQSC*FTWIFFAWIAP
Trigger: CGGTGCAATCCAAGCGAAGAAAATCCAAGTAAACAAGCAGGACTGCGACTTGATACTTGGAAATGTGTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000471897.1
ENST00000612493.4
CDS CAA 72 bp ACTTATACAGGTCAAATCCAACCACAGGTTGCCAGTTaGCAACCTCTGCTACAGAAGTTCTCTGCAAAAGTG +
Preference number: 6 (lower is better)
Translates to: TYTGQIQPQVAS*QPLLQKFSAKV
Trigger: CACTTTTGCAGAGAACTTCTGTAGCAGAGGTTGCAAACTGGCAACCTGTGGTTGGATTTGACCTGTATAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS CAA 90 bp GTCACACACATTTCCAAGTATCAAGTCGCAGTCCTGCTTGTTTACTaGGATTTTCTTCGCTTGGATTGCACCGCACTGGTTATGTCTTTA +
Preference number: 6 (lower is better)
Translates to: VTHISKYQVAVLLVY*DFLRLDCTALVMSL
Trigger: TAAAGACATAACCAGTGCGGTGCAATCCAAGCGAAGAAAATCCAAGTAAACAAGCAGGACTGCGACTTGATACTTGGAAATGTGTGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000471897.1
ENST00000612493.4
CDS TCA 72 bp ATTGTGACAACTGTTGACATCAATGCAGACTGCAAGTaGGTTGGCAAAGCTGCTGATGTGTTAGCTGAAGTT +
Preference number: 6 (lower is better)
Translates to: IVTTVDINADCK*VGKAADVLAEV
Trigger: AACTTCAGCTAACACATCAGCAGCTTTGCCAACTCACTTGCAGTCTGCATTGATGTCAACAGTTGTCACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS GCA 72 bp ACAAAATACTTATACAGGTCAAATCCAACCACAGGTTaGCAGTTTGCAACCTCTGCTACAGAAGTTCTCTGC +
Preference number: 6 (lower is better)
Translates to: TKYLYRSNPTTG*QFATSATEVLC
Trigger: GCAGAGAACTTCTGTAGCAGAGGTTGCAAACTGGCAACCTGTGGTTGGATTTGACCTGTATAAGTATTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS CAA 72 bp AACAAAATACTTATACAGGTCAAATCCAACCACAGGTaGCCAGTTTGCAACCTCTGCTACAGAAGTTCTCTG +
Preference number: 6 (lower is better)
Translates to: NKILIQVKSNHR*PVCNLCYRSSL
Trigger: CAGAGAACTTCTGTAGCAGAGGTTGCAAACTGGCAACCTGTGGTTGGATTTGACCTGTATAAGTATTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS CAA 72 bp CTCCTTGGGTTGTGTAGCAGGAAGTTCCTATCAATCTaGCAGTTCACTTCTCTGAAACTATTCTGTATATCC +
Preference number: 6 (lower is better)
Translates to: LLGLCSRKFLSI*QFTSLKLFCIS
Trigger: GGATATACAGAATAGTTTCAGAGAAGTGAACTGCAAGATTGATAGGAACTTCCTGCTACACAACCCAAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626057.1
CDS CAA 90 bp TTCCAGCATCTCCTTGGGTTGTGTAGCAGGAAGTTCCTATCAATCTaGCAGTTCACTTCTCTGAAACTATTCTGTATATCCAAGGATAGT +
Preference number: 6 (lower is better)
Translates to: FQHLLGLCSRKFLSI*QFTSLKLFCISKDS
Trigger: ACTATCCTTGGATATACAGAATAGTTTCAGAGAAGTGAACTGCAAGATTGATAGGAACTTCCTGCTACACAACCCAAGGAGATGCTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626057.1
CDS CAA 72 bp TTCTTACATGCCTTGGTCAACAAAATTTGGCCAATTTaGTCCACTTTTCCTTTGCCCTTACTAGACGAGACT +
Preference number: 6 (lower is better)
Translates to: FLHALVNKIWPI*STFPLPLLDET
Trigger: AGTCTCGTCTAGTAAGGGCAAAGGAAAAGTGGACAAAATTGGCCAAATTTTGTTGACCAAGGCATGTAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS CAA 72 bp GATGTTTGTTGTTTTTATTTCCAGCATCTCCTTGGGTaGTGTAGCAGGAAGTTCCTATCAATCTTGCAGTTC +
Preference number: 6 (lower is better)
Translates to: DVCCFYFQHLLG*CSRKFLSILQF
Trigger: GAACTGCAAGATTGATAGGAACTTCCTGCTACACAACCCAAGGAGATGCTGGAAATAAAAACAACAAACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626057.1
CDS CAA 90 bp TACATGGTATGGAGACAAAGCTGGCACAGATACAACTTGGTTTGTTaGGGACATAAGACACTTGGTCTATTTTTATTTCTACTCCACATG +
Preference number: 6 (lower is better)
Translates to: YMVWRQSWHRYNLVC*GHKTLGLFLFLLHM
Trigger: CATGTGGAGTAGAAATAAAAATAGACCAAGTGTCTTATGTCCCAAACAAACCAAGTTGTATCTGTGCCAGCTTTGTCTCCATACCATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471897.1
CDS CAA 90 bp TTCTCACCCTACATGGTATGGAGACAAAGCTGGCACAGATACAACTaGGTTTGTTTGGGACATAAGACACTTGGTCTATTTTTATTTCTA +
Preference number: 6 (lower is better)
Translates to: FSPYMVWRQSWHRYN*VCLGHKTLGLFLFL
Trigger: TAGAAATAAAAATAGACCAAGTGTCTTATGTCCCAAACAAACCAAGTTGTATCTGTGCCAGCTTTGTCTCCATACCATGTAGGGTGAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471897.1
CDS CAA 90 bp CTTTTAAAGGATGTTTGTTGTTTTTATTTCCAGCATCTCCTTGGGTaGTGTAGCAGGAAGTTCCTATCAATCTTGCAGTTCACTTCTCTG +
Preference number: 6 (lower is better)
Translates to: LLKDVCCFYFQHLLG*CSRKFLSILQFTSL
Trigger: CAGAGAAGTGAACTGCAAGATTGATAGGAACTTCCTGCTACACAACCCAAGGAGATGCTGGAAATAAAAACAACAAACATCCTTTAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626057.1
CDS TCA 72 bp TGCTTTCCAGAATTCACTACCACAGAATCTAATTTGTaGGTTTGTGGGGTAGCAAAATTGGAAGGATTCATG +
Preference number: 6 (lower is better)
Translates to: CFPEFTTTESNL*VCGVAKLEGFM
Trigger: CATGAATCCTTCCAATTTTGCTACCCCACAAACTCACAAATTAGATTCTGTGGTAGTGAATTCTGGAAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS TCA 72 bp GCAGGAAGTTCCTATCAATCTTGCAGTTCACTTCTCTaGAACTATTCTGTATATCCAAGGATAGTCACTGTA +
Preference number: 6 (lower is better)
Translates to: AGSSYQSCSSLL*NYSVYPRIVTV
Trigger: TACAGTGACTATCCTTGGATATACAGAATAGTTTCAGAGAAGTGAACTGCAAGATTGATAGGAACTTCCTGC
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626057.1
CDS CAA 72 bp CCTTTCTCAAGAGAGCCTGTAACTTTCTTACATGCCTaGGTCAACAAAATTTGGCCAATTTTGTCCACTTTT +
Preference number: 6 (lower is better)
Translates to: PFSREPVTFLHA*VNKIWPILSTF
Trigger: AAAAGTGGACAAAATTGGCCAAATTTTGTTGACCAAGGCATGTAAGAAAGTTACAGGCTCTCTTGAGAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359003.7
ENST00000374796.6
CDS TCA 72 bp ACCTCTGATTTCCTTAACCAAAAACTACACCACACTTaGCAGCTTTGCAATGGTTTCCAAAACTCTATTACT +
Preference number: 6 (lower is better)
Translates to: TSDFLNQKLHHT*QLCNGFQNSIT
Trigger: AGTAATAGAGTTTTGGAAACCATTGCAAAGCTGTCAAGTGTGGTGTAGTTTTTGGTTAAGGAAATCAGAGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS CAA 72 bp GTTGAACATCCAACACTCAAACACATAGATCAGGGGTaGGCAAATGTTTTTGTAAAGAGTATTTCCAGCTTT +
Preference number: 6 (lower is better)
Translates to: VEHPTLKHIDQG*ANVFVKSISSF
Trigger: AAAGCTGGAAATACTCTTTACAAAAACATTTGCCAACCCCTGATCTATGTGTTTGAGTGTTGGATGTTCAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS CAA 72 bp TGGAGACAAAGCTGGCACAGATACAACTTGGTTTGTTaGGGACATAAGACACTTGGTCTATTTTTATTTCTA +
Preference number: 6 (lower is better)
Translates to: WRQSWHRYNLVC*GHKTLGLFLFL
Trigger: TAGAAATAAAAATAGACCAAGTGTCTTATGTCCCAAACAAACCAAGTTGTATCTGTGCCAGCTTTGTCTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471897.1
CDS CAA 72 bp ACAACACATCTCTGTCACGACTACTCAACTCTGCTATaGGTACCACAAAAGAAGATATGGACAATATATAAA +
Preference number: 6 (lower is better)
Translates to: TTHLCHDYSTLL*VPQKKIWTIYK
Trigger: TTTATATATTGTCCATATCTTCTTTTGTGGTACCAATAGCAGAGTTGAGTAGTCGTGACAGAGATGTGTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374796.6
CDS CAA 72 bp TTTCTTCTTCTTCGGTTTATTTGCGTTGGTATTATTTaGCTTATTGTTTACCCCAAAATGGCCTGCAGATAT +
Preference number: 6 (lower is better)
Translates to: FLLLRFICVGII*LIVYPKMACRY
Trigger: ATATCTGCAGGCCATTTTGGGGTAAACAATAAGCAAAATAATACCAACGCAAATAAACCGAAGAAGAAGAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359003.7
ENST00000374796.6
ENST00000612493.4
ENST00000616167.1
ENST00000628752.2