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Pregenerated sensors for NCOA4 (Homo sapiens)

Ensembl gene IDs: ENSG00000266412

Ensembl transcript IDs: ENST00000583565.5, ENST00000585132.5

Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp CACCGACTCACCAGCTGCCCGGCAAGCGACAGGCTGCTTTACCCCTaGCCCGAGTGCGAAAGGTCCCCGAGCCCGGGCCTCGTCCCGCCC +
Preference number: 5 (lower is better)
Translates to: HRLTSCPASDRLLYP*PECERSPSPGLVPP
Trigger: GGGCGGGACGAGGCCCGGGCTCGGGGACCTTTCGCACTCGGGTCAGGGGTAAAGCAGCCTGTCGCTTGCCGGGCAGCTGGTGAGTCGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585132.5
CDS GCA 90 bp ACAGGCCAGGTCACCGACTCACCAGCTGCCCGGCAAGCGACAGGCTaGTTTACCCCTGACCCGAGTGCGAAAGGTCCCCGAGCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: TGQVTDSPAARQATG*FTPDPSAKGPRARA
Trigger: GGCCCGGGCTCGGGGACCTTTCGCACTCGGGTCAGGGGTAAAGCAGCCTGTCGCTTGCCGGGCAGCTGGTGAGTCGGTGACCTGGCCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585132.5
CDS GCA 90 bp AGCTGGAGCGTGATGGGCTGCTTCACTTTGCACTTAGGCCAGTCATaGAAGACCTGTTTAGCAGTCTTTCAAATGTGTTACCCAGCCTTC +
Preference number: 5 (lower is better)
Translates to: SWSVMGCFTLHLGQS*KTCLAVFQMCYPAF
Trigger: GAAGGCTGGGTAACACATTTGAAAGACTGCTAAACAGGTCTTGCATGACTGGCCTAAGTGCAAAGTGAAGCAGCCCATCACGCTCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583565.5
CDS TCA 72 bp ACCAGCTGCCCGGCAAGCGACAGGCTGCTTTACCCCTaGCCCGAGTGCGAAAGGTCCCCGAGCCCGGGCCTC +
Preference number: 6 (lower is better)
Translates to: TSCPASDRLLYP*PECERSPSPGL
Trigger: GAGGCCCGGGCTCGGGGACCTTTCGCACTCGGGTCAGGGGTAAAGCAGCCTGTCGCTTGCCGGGCAGCTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585132.5
CDS GCA 72 bp GTCACCGACTCACCAGCTGCCCGGCAAGCGACAGGCTaGTTTACCCCTGACCCGAGTGCGAAAGGTCCCCGA +
Preference number: 6 (lower is better)
Translates to: VTDSPAARQATG*FTPDPSAKGPR
Trigger: TCGGGGACCTTTCGCACTCGGGTCAGGGGTAAAGCAGCCTGTCGCTTGCCGGGCAGCTGGTGAGTCGGTGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585132.5
CDS GCA 72 bp CATTCTCCTCACTGCTCCTGTATCACATGGGTGAAATaGCGGCTCCGATTTGGAGAGCTGGAGCGTGATGGG +
Preference number: 6 (lower is better)
Translates to: HSPHCSCITWVK*RLRFGELERDG
Trigger: CCCATCACGCTCCAGCTCTCCAAATCGGAGCCGGCATTTCACCCATGTGATACAGGAGCAGTGAGGAGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583565.5
CDS CAA 90 bp GCCGGCTCCGATTTGGAGAGCTGGAGCGTGATGGGCTGCTTCACTTaGCACTTAGGCCAGTCATGCAAGACCTGTTTAGCAGTCTTTCAA +
Preference number: 6 (lower is better)
Translates to: AGSDLESWSVMGCFT*HLGQSCKTCLAVFQ
Trigger: TTGAAAGACTGCTAAACAGGTCTTGCATGACTGGCCTAAGTGCAAAGTGAAGCAGCCCATCACGCTCCAGCTCTCCAAATCGGAGCCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583565.5
CDS CAA 72 bp GATTTGGAGAGCTGGAGCGTGATGGGCTGCTTCACTTaGCACTTAGGCCAGTCATGCAAGACCTGTTTAGCA +
Preference number: 6 (lower is better)
Translates to: DLESWSVMGCFT*HLGQSCKTCLA
Trigger: TGCTAAACAGGTCTTGCATGACTGGCCTAAGTGCAAAGTGAAGCAGCCCATCACGCTCCAGCTCTCCAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583565.5
CDS GCA 72 bp GTGATGGGCTGCTTCACTTTGCACTTAGGCCAGTCATaGAAGACCTGTTTAGCAGTCTTTCAAATGTGTTAC +
Preference number: 6 (lower is better)
Translates to: VMGCFTLHLGQS*KTCLAVFQMCY
Trigger: GTAACACATTTGAAAGACTGCTAAACAGGTCTTGCATGACTGGCCTAAGTGCAAAGTGAAGCAGCCCATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583565.5
CDS CAA 90 bp CCTTCTTCACCTGTGCCAAATTTCTCACTTTTAGCTTCTCACCATTaGTGTGGAATGCCACAATGCCTGGCACAGTGTAAAATTGAATCA +
Preference number: 6 (lower is better)
Translates to: PSSPVPNFSLLASHH*CGMPQCLAQCKIES
Trigger: TGATTCAATTTTACACTGTGCCAGGCATTGTGGCATTCCACACAAATGGTGAGAAGCTAAAAGTGAGAAATTTGGCACAGGTGAAGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583565.5