RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NCOA3 (Homo sapiens)

Ensembl gene IDs: ENSG00000124151

Ensembl transcript IDs: ENST00000371997.3, ENST00000371998.8, ENST00000372004.7, ENST00000497292.1

Found 875 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGCTTCTGCAAATAAAAAGGGAACTGGGCAGGCATACATGTAACTaGCAATCCATTCTGTTTACTTTCAGCTGCACCCACCTCTGGATC +
Preference number: 1 (lower is better)
Translates to: QLLQIKRELGRHTCN*QSILFTFSCTHLWI
Trigger: GATCCAGAGGTGGGTGCAGCTGAAAGTAAACAGAATGGATTGCCAGTTACATGTATGCCTGCCCAGTTCCCTTTTTATTTGCAGAAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
3UTR TCA 90 bp GAGCTCAAAGCTGGTCCTTTCTTCCAAGATGGATGCCTGGAACAATaGTTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACAGTGG +
Preference number: 1 (lower is better)
Translates to: ELKAGPFFQDGCLEQ*FLPNNPSAVSFVQW
Trigger: CCACTGTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATCCATCTTGGAAGAAAGGACCAGCTTTGAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR TCA 90 bp TCACCAATTCCACTGGACAAAGGGTCAACACAGAACTACTACACCTaGAGGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAA +
Preference number: 1 (lower is better)
Translates to: SPIPLDKGSTQNYYT*RLGLCSLSNTATRE
Trigger: TTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACCCTTTGTCCAGTGGAATTGGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR GCA 90 bp GGCAGGCATACATGTAACTGGCAATCCATTCTGTTTACTTTCAGCTaGACCCACCTCTGGATCAAAGAACTTCTAGGACATCAAGCCAAT +
Preference number: 1 (lower is better)
Translates to: GRHTCNWQSILFTFS*THLWIKELLGHQAN
Trigger: ATTGGCTTGATGTCCTAGAAGTTCTTTGATCCAGAGGTGGGTGCAGCTGAAAGTAAACAGAATGGATTGCCAGTTACATGTATGCCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
3UTR CCA 90 bp TTCCACTGGACAAAGGGTCAACACAGAACTACTACACCTGAAGGCTaGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGAT +
Preference number: 1 (lower is better)
Translates to: FHWTKGQHRTTTPEG*DYALCPILQLEKPD
Trigger: ATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACCCTTTGTCCAGTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR TCA 90 bp CTGACCTGGTTCTTCCTCTGTCTCCAAACAGGAGAGTATACTATCTaGAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATC +
Preference number: 1 (lower is better)
Translates to: LTWFFLCLQTGEYTI*KAQATTMEVFGFTI
Trigger: GATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGGAGACAGAGGAAGAACCAGGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR CCA 90 bp CTGCGATTAAATACTGTCATCTCATTTCCTTTCTGCAAAGCCATTTaGACATCCATGACAGTTCCTGGAGGTGAAGTATTACAGGACATG +
Preference number: 1 (lower is better)
Translates to: LRLNTVISFPFCKAI*TSMTVPGGEVLQDM
Trigger: CATGTCCTGTAATACTTCACCTCCAGGAACTGTCATGGATGTCCAAATGGCTTTGCAGAAAGGAAATGAGATGACAGTATTTAATCGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR TCA 90 bp AACATACACACACACACACACACATACACACACACACACAGCCCATaGATTGCTATTATTTCGGACTGCTTAAAATCCAAAAGATTCTCT +
Preference number: 1 (lower is better)
Translates to: NIHTHTHTYTHTHSP*IAIISDCLKSKRFS
Trigger: AGAGAATCTTTTGGATTTTAAGCAGTCCGAAATAATAGCAATTCATGGGCTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR GCA 90 bp ACACACACACACACACACATACACACACACACACAGCCCATGAATTaGTATTATTTCGGACTGCTTAAAATCCAAAAGATTCTCTTCAAA +
Preference number: 1 (lower is better)
Translates to: THTHTHIHTHTQPMN*YYFGLLKIQKILFK
Trigger: TTTGAAGAGAATCTTTTGGATTTTAAGCAGTCCGAAATAATAGCAATTCATGGGCTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR TCA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGCAGAACTACTACACCTaGAGGCTGGGACTATGCTCT +
Preference number: 2 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRQNYYT*RLGLCS
Trigger: AGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTG...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR TCA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGCCATTTGGACATCCATaGCAGTTCCTGGAGGTGAAG +
Preference number: 2 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRPFGHP*QFLEVK
Trigger: CTTCACCTCCAGGAACTGTCATGGATGTCCAAATGG...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR TCA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGAACACTGCGAGATTCTaGTTCAGAATGCAGTACCTG +
Preference number: 2 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRNTARF*FRMQYL
Trigger: CAGGTACTGCATTCTGAATCAGAATCTCGCAGTGTT...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR CCA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGTCCAAGATGGATGCCTaGAACAATGATTCCTTCCCA +
Preference number: 2 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRSKMDA*NNDSFP
Trigger: TGGGAAGGAATCATTGTTCCAGGCATCCATCTTGGA...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR CAA 90 bp GGCTTAAAATCCAGTCCTGCTCAAATGACATCACTTAAAATACCCTaGATGGAGCTCAAAGCTGGTCCTTTCTTCCAAGATGGATGCCTG +
Preference number: 2 (lower is better)
Translates to: GLKSSPAQMTSLKIP*MELKAGPFFQDGCL
Trigger: CAGGCATCCATCTTGGAAGAAAGGACCAGCTTTGAGCTCCATCAAGGGTATTTTAAGTGATGTCATTTGAGCAGGACTGGATTTTAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR TCA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAACAGAACTACTACACCTaGAGGCTGGGACTATGCTCT +
Preference number: 2 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQEQNYYT*RLGLCS
Trigger: AGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTG...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR TCA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGCCATTTGGACATCCATaGCAGTTCCTGGAGGTGAAG +
Preference number: 2 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRPFGHP*QFLEVK
Trigger: CTTCACCTCCAGGAACTGTCATGGATGTCCAAATGG...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR TCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTCCATTTGGACATCCATaGCAGTTCCTGGAGGTGAAG +
Preference number: 2 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFPFGHP*QFLEVK
Trigger: CTTCACCTCCAGGAACTGTCATGGATGTCCAAATGG...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR GCA 90 bp GAAGAGAGAAAACACCCTGCTCGTTTATTAACAGTGTGCCTTGGAGTTGAAAACGAGGGGTTTAAAAGGTaGTCAGTTAGACTGTGGCTC +
Preference number: 2 (lower is better)
Translates to: EERKHPARLLTVCLGVENEGFKR*SVRLWL
Trigger: GAGCCACAGTCTAACTGAGCACCTTTTAAACCCCTC...GTTTTCAACTCCAAGGCACACTGTTAATAAACGAGCAGGGTGTTTTCTCTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR CCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACGATGGAGCTCAAAGCTaGTCCTTTCTTCCAAGATGG +
Preference number: 2 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHDGAQS*SFLPRW
Trigger: CCATCTTGGAAGAAAGGACCAGCTTTGAGCTCCATC...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR TCA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATCCAGTCCTGCTCAAATaGCATCACTTAAAATACCCT +
Preference number: 2 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHPVLLK*HHLKYP
Trigger: AGGGTATTTTAAGTGATGTCATTTGAGCAGGACTGG...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR TCA 90 bp GAAGAGAGAAAACACCCTGCTCGTTTATTAACAGTGTGCCTTGGAGTTGAAAACGTTAGACTGTGGCTCTaGATCACAGTAAAACTGGCT +
Preference number: 2 (lower is better)
Translates to: EERKHPARLLTVCLGVENVRLWL*ITVKLA
Trigger: AGCCAGTTTTACTGTGATTCAGAGCCACAGTCTAAC...GTTTTCAACTCCAAGGCACACTGTTAATAAACGAGCAGGGTGTTTTCTCTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR CCA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTATCCAAGATGGATGCCTaGAACAATGATTCCTTCCCA +
Preference number: 2 (lower is better)
Translates to: GWDYALCPILQLEKPDILSKMDA*NNDSFP
Trigger: TGGGAAGGAATCATTGTTCCAGGCATCCATCTTGGA...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR CCA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATGATGGAGCTCAAAGCTaGTCCTTTCTTCCAAGATGG +
Preference number: 2 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDDGAQS*SFLPRW
Trigger: CCATCTTGGAAGAAAGGACCAGCTTTGAGCTCCATC...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR CCA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAAGATGGAGCTCAAAGCTaGTCCTTTCTTCCAAGATGG +
Preference number: 2 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQEDGAQS*SFLPRW
Trigger: CCATCTTGGAAGAAAGGACCAGCTTTGAGCTCCATC...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR CCA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTACTACACCTGAAGGCTaGGACTATGCTCTTTGTCCA +
Preference number: 2 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVTTPEG*DYALCP
Trigger: TGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGT...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR CCA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGACTACACCTGAAGGCTaGGACTATGCTCTTTGTCCA +
Preference number: 2 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRTTPEG*DYALCP
Trigger: TGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGT...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR CCA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGCACAGGCCACTACAATaGAAGTTTTCGGATTTACAA +
Preference number: 2 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRHRPLQ*KFSDLQ
Trigger: TTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTG...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR TCA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTACCAGTCCTGCTCAAATaGCATCACTTAAAATACCCT +
Preference number: 2 (lower is better)
Translates to: GWDYALCPILQLEKPDILPVLLK*HHLKYP
Trigger: AGGGTATTTTAAGTGATGTCATTTGAGCAGGACTGG...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR GCA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGCCCAAATTAACAAAGTaGTTAGTTCTGGTAGAGGAA +
Preference number: 2 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRPKLTK*LVLVEE
Trigger: TTCCTCTACCAGAACTAAGCACTTTGTTAATTTGGG...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR CCA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGTCCAAGATGGATGCCTaGAACAATGATTCCTTCCCA +
Preference number: 2 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRSKMDA*NNDSFP
Trigger: TGGGAAGGAATCATTGTTCCAGGCATCCATCTTGGA...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR CCA 90 bp GAAGAGAGAAAACACCCTGCTCGTTTATTAACAGTGTGCCTTGGAGTTGAAAACTTCTGCAAAGCCATTTaGACATCCATGACAGTTCCT +
Preference number: 2 (lower is better)
Translates to: EERKHPARLLTVCLGVENFCKAI*TSMTVP
Trigger: AGGAACTGTCATGGATGTCCAAATGGCTTTGCAGAA...GTTTTCAACTCCAAGGCACACTGTTAATAAACGAGCAGGGTGTTTTCTCTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR CCA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATTGCAGTACCTGGCCTTaGGTTTTCAGAAGTTTATTT +
Preference number: 2 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHCSTWP*VFRSLF
Trigger: AAATAAACTTCTGAAAACCCAAGGCCAGGTACTGCA...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR TCA 90 bp CAACTCAACACCATTAGTAAAGGACAATTCAGAATCACCAATTCCACTGGACAAGGATGCCTGGAACAATaGTTCCTTCCCAATAATCCT +
Preference number: 2 (lower is better)
Translates to: QLNTISKGQFRITNSTGQGCLEQ*FLPNNP
Trigger: AGGATTATTGGGAAGGAATCATTGTTCCAGGCATCC...TTGTCCAGTGGAATTGGTGATTCTGAATTGTCCTTTACTAATGGTGTTGAGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR TCA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCCAGTCCTGCTCAAATaGCATCACTTAAAATACCCT +
Preference number: 2 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVPVLLK*HHLKYP
Trigger: AGGGTATTTTAAGTGATGTCATTTGAGCAGGACTGG...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR GCA 90 bp GAAGAGAGAAAACACCCTGCTCGTTTATTAACAGTGTGCCTTGGAGTTGAAAACACACAGCCCATGAATTaGTATTATTTCGGACTGCTT +
Preference number: 2 (lower is better)
Translates to: EERKHPARLLTVCLGVENTQPMN*YYFGLL
Trigger: AAGCAGTCCGAAATAATAGCAATTCATGGGCTGTGT...GTTTTCAACTCCAAGGCACACTGTTAATAAACGAGCAGGGTGTTTTCTCTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR CCA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAATCCTTTCTTCCAAGATaGATGCCTGGAACAATGATT +
Preference number: 2 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKSFLPR*MPGTMI
Trigger: AATCATTGTTCCAGGCATCCATCTTGGAAGAAAGGA...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR CCA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTATCCTTTCTTCCAAGATaGATGCCTGGAACAATGATT +
Preference number: 2 (lower is better)
Translates to: GWDYALCPILQLEKPDILSFLPR*MPGTMI
Trigger: AATCATTGTTCCAGGCATCCATCTTGGAAGAAAGGA...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR CCA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGTCTTCCAATGTTCTCTaGCCCACCTACGTGTATTTA +
Preference number: 2 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRSSNVL*PTYVYL
Trigger: TAAATACACGTAGGTGGGCCAGAGAACATTGGAAGA...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR CCA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTAATCACCAATTCCACTaGACAAAGGGTCAACACAGA +
Preference number: 2 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVNHQFH*TKGQHR
Trigger: TCTGTGTTGACCCTTTGTCCAGTGGAATTGGTGATT...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR TCA 90 bp GAAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATCTTTCTTAGATCACACACACAGCCCATaGATTGCTATTATTTCGGAC +
Preference number: 2 (lower is better)
Translates to: EKHRPLQWKFSDLQSFLDHTHSP*IAIISD
Trigger: GTCCGAAATAATAGCAATTCATGGGCTGTGTGTGTG...ATCTAAGAAAGATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR TCA 90 bp GAAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATCTTTCTTAGATGCTAGCAGAGACCTCTaGAATTCACAGACATTCAGA +
Preference number: 2 (lower is better)
Translates to: EKHRPLQWKFSDLQSFLDASRDL*NSQTFR
Trigger: TCTGAATGTCTGTGAATTTCAGAGGTCTCTGCTAGC...ATCTAAGAAAGATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR GCA 90 bp GAAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATCTTTCTTAGATGATTCTGATTCAGAATaGAGTACCTGGCCTTGGGTT +
Preference number: 2 (lower is better)
Translates to: EKHRPLQWKFSDLQSFLDDSDSE*STWPWV
Trigger: AACCCAAGGCCAGGTACTGCATTCTGAATCAGAATC...ATCTAAGAAAGATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR GCA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATTATTCACAGAAACACTaGGAGATTCTGATTCAGAAT +
Preference number: 2 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHYSQKH*EILIQN
Trigger: ATTCTGAATCAGAATCTCGCAGTGTTTCTGTGAATA...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR TCA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTGACACAAAAGTTTTATaGTCAGTAACACTCCATGTC +
Preference number: 2 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVDTKVL*SVTLHV
Trigger: GACATGGAGTGTTACTGATCATAAAACTTTTGTGTC...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR CCA 90 bp TTAGCATGTGAAAAGTTTGCTACTGCTGCGATTAAATACTGTCATCTCATTTCCTCTTCCAATGTTCTCTaGCCCACCTACGTGTATTTA +
Preference number: 2 (lower is better)
Translates to: LACEKFATAAIKYCHLISSSNVL*PTYVYL
Trigger: TAAATACACGTAGGTGGGCCAGAGAACATTGGAAGA...GGAAATGAGATGACAGTATTTAATCGCAGCAGTAGCAAACTTTTCACATGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR TCA 72 bp CCACTGGACAAAGGGTCAACACAGAACTACTACACCTaGAGGCTGGGACTATGCTCTTTGTCCAATACTGCA +
Preference number: 3 (lower is better)
Translates to: PLDKGSTQNYYT*RLGLCSLSNTA
Trigger: TGCAGTATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACCCTTTGTCCAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR CAA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGCACACAGCCCATGAATaGCTATTATTTCGGACTGCT +
Preference number: 3 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRHTAHE*LLFRTA
Trigger: AGCAGTCCGAAATAATAGCAATTCATGGGCTGTGTG...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR CAA 90 bp GGTCAACACAGAACTACTACACCTGAAGGCTGGGACTATGCTCTTTGTCCAATATCACTTAAAATACCCTaGATGGAGCTCAAAGCTGGT +
Preference number: 3 (lower is better)
Translates to: GQHRTTTPEGWDYALCPISLKIP*MELKAG
Trigger: ACCAGCTTTGAGCTCCATCAAGGGTATTTTAAGTGA...TATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR CAA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATTTTCTGCAAAGCCATTaGGACATCCATGACAGTTCC +
Preference number: 3 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHFLQSH*DIHDSS
Trigger: GGAACTGTCATGGATGTCCAAATGGCTTTGCAGAAA...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR TCA 72 bp GCTGGTCCTTTCTTCCAAGATGGATGCCTGGAACAATaGTTCCTTCCCAATAATCCTAGTGCAGTGTCATTT +
Preference number: 3 (lower is better)
Translates to: AGPFFQDGCLEQ*FLPNNPSAVSF
Trigger: AAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATCCATCTTGGAAGAAAGGACCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR CAA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTTCTGCAAAGCCATTaGGACATCCATGACAGTTCC +
Preference number: 3 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHFLQSH*DIHDSS
Trigger: GGAACTGTCATGGATGTCCAAATGGCTTTGCAGAAA...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR CAA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAATCACTTAAAATACCCTaGATGGAGCTCAAAGCTGGT +
Preference number: 3 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKSLKIP*MELKAG
Trigger: ACCAGCTTTGAGCTCCATCAAGGGTATTTTAAGTGA...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR CAA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGCACACAGCCCATGAATaGCTATTATTTCGGACTGCT +
Preference number: 3 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRHTAHE*LLFRTA
Trigger: AGCAGTCCGAAATAATAGCAATTCATGGGCTGTGTG...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR TCA 72 bp TTGCTAGAAAATGATACCAAGGCTAGCAGAGACCTCTaGAATTCACAGACATTCAGAAACCCAATTCCGTCA +
Preference number: 3 (lower is better)
Translates to: LLENDTKASRDL*NSQTFRNPIPS
Trigger: TGACGGAATTGGGTTTCTGAATGTCTGTGAATTTCAGAGGTCTCTGCTAGCCTTGGTATCATTTTCTAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR CCA 72 bp CAATCCATTCTGTTTACTTTCAGCTGCACCCACCTCTaGATCAAAGAACTTCTAGGACATCAAGCCAATTAT +
Preference number: 3 (lower is better)
Translates to: QSILFTFSCTHL*IKELLGHQANY
Trigger: ATAATTGGCTTGATGTCCTAGAAGTTCTTTGATCCAGAGGTGGGTGCAGCTGAAAGTAAACAGAATGGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR CAA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAATCACTTAAAATACCCTaGATGGAGCTCAAAGCTGGT +
Preference number: 3 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQESLKIP*MELKAG
Trigger: ACCAGCTTTGAGCTCCATCAAGGGTATTTTAAGTGA...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR CAA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTATGCAGTACCTGGCCTaGGGTTTTCAGAAGTTTATT +
Preference number: 3 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFMQYLA*GFQKFI
Trigger: AATAAACTTCTGAAAACCCAAGGCCAGGTACTGCAT...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR CAA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTATGCAGTACCTGGCCTaGGGTTTTCAGAAGTTTATT +
Preference number: 3 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVMQYLA*GFQKFI
Trigger: AATAAACTTCTGAAAACCCAAGGCCAGGTACTGCAT...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR-3UTR CAA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTAGATATATTTTGAACTaGGTAGGGGAAAGAGGGCAA +
Preference number: 3 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFRYILN*VGERGQ
Trigger: TTGCCCTCTTTCCCCTACCAAGTTCAAAATATATCT...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR TCA 72 bp ACACACACACACACATACACACACACACACAGCCCATaGATTGCTATTATTTCGGACTGCTTAAAATCCAAA +
Preference number: 3 (lower is better)
Translates to: THTHTYTHTHSP*IAIISDCLKSK
Trigger: TTTGGATTTTAAGCAGTCCGAAATAATAGCAATTCATGGGCTGTGTGTGTGTGTGTATGTGTGTGTGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR GCA 72 bp CTATTCACAGAAACACTGCGAGATTCTGATTCAGAATaGAGTACCTGGCCTTGGGTTTTCAGAAGTTTATTT +
Preference number: 3 (lower is better)
Translates to: LFTETLRDSDSE*STWPWVFRSLF
Trigger: AAATAAACTTCTGAAAACCCAAGGCCAGGTACTGCATTCTGAATCAGAATCTCGCAGTGTTTCTGTGAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR CCA 72 bp AATACTGTCATCTCATTTCCTTTCTGCAAAGCCATTTaGACATCCATGACAGTTCCTGGAGGTGAAGTATTA +
Preference number: 3 (lower is better)
Translates to: NTVISFPFCKAI*TSMTVPGGEVL
Trigger: TAATACTTCACCTCCAGGAACTGTCATGGATGTCCAAATGGCTTTGCAGAAAGGAAATGAGATGACAGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR GCA 72 bp CACACACACATACACACACACACACAGCCCATGAATTaGTATTATTTCGGACTGCTTAAAATCCAAAAGATT +
Preference number: 3 (lower is better)
Translates to: HTHIHTHTQPMN*YYFGLLKIQKI
Trigger: AATCTTTTGGATTTTAAGCAGTCCGAAATAATAGCAATTCATGGGCTGTGTGTGTGTGTGTATGTGTGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR GCA 72 bp GAAGAGAGAAAACACCCTGCTCGTTTATTAACAGTGTaGCTTGGAGTTGAAAACAATAAATCAATCCTTGAG +
Preference number: 3 (lower is better)
Translates to: EERKHPARLLTV*LGVENNKSILE
Trigger: CTCAAGGATTGATTTATTGTTTTCAACTCCAAGGCACACTGTTAATAAACGAGCAGGGTGTTTTCTCTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGGGGGGTGCTGGGGTGTaGGGAGAGGTAGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRGGAGV*GEVDSR
Trigger: CCTGCTGTCTACCTCTCCTCACACCCCAGCACCCCC...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
54% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GGTCAACACAGAACTACTACACCTGAAGGCTGGGACTATGCTCTTTGTCCAATAGGGGGTGCTGGGGTGTaGGGAGAGGTAGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: GQHRTTTPEGWDYALCPIGGAGV*GEVDSR
Trigger: CCTGCTGTCTACCTCTCCTCACACCCCAGCACCCCC...TATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGCTGGTAGGAAGATGGTaGTTGCATGCCTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRLVGRW*LHAWPR
Trigger: CCTGGGCCAGGCATGCAATCACCATCTTCCTACCAG...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGCCAAGCCATAGGCCCTaGTGCTCGGCATCTGTAAGC +
Preference number: 4 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRPSHRP*CSASVS
Trigger: GCTTACAGATGCCGAGCAGCAGGGCCTATGGCTTGG...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGGCGGGTGTTGCATCATaGGATTCTGGGAGGGACCCA +
Preference number: 4 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRAGVAS*DSGRDP
Trigger: TGGGTCCCTCCCAGAATCCCATGATGCAACACCCGC...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GGTCAACACAGAACTACTACACCTGAAGGCTGGGACTATGCTCTTTGTCCAATAGCAGGATTCCCCTGGTaGGCAAACTGCTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: GQHRTTTPEGWDYALCPIAGFPW*ANCCWE
Trigger: TTCCCAGCAGCAGTTTGCCCACCAGGGGAATCCTGC...TATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GGTCAACACAGAACTACTACACCTGAAGGCTGGGACTATGCTCTTTGTCCAATAAGCCATAGGCCCTGCTaGTCGGCATCTGTAAGCCTT +
Preference number: 4 (lower is better)
Translates to: GQHRTTTPEGWDYALCPISHRPC*SASVSL
Trigger: AAGGCTTACAGATGCCGAGCAGCAGGGCCTATGGCT...TATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATTGTGGTGCTAGGGTCTaGCAAGCCATAGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHCGARV*QAIGPA
Trigger: AGCAGGGCCTATGGCTTGGCAGACCCTAGCACCACA...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGTGCTGCTGCTGCTGCTaGATCATCATAGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRCCCCC*IIIATL
Trigger: GAGGGTGGCTATGATGATGCAGCAGCAGCAGCAGCA...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GGTCAACACAGAACTACTACACCTGAAGGCTGGGACTATGCTCTTTGTCCAATATGCTGCTGCTGCTGCTaGTGCATCATCATAGCCACC +
Preference number: 4 (lower is better)
Translates to: GQHRTTTPEGWDYALCPICCCCC*CIIIAT
Trigger: GGTGGCTATGATGATGCAGCAGCAGCAGCAGCAGCA...TATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGCTGAAGGCCTGGGTTTaGTGCTGTTGCTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRLKAWV*CCCCCC
Trigger: GCAACAGCAGCAACAGCAGCAAACCCAGGCCTTCAG...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGGGCCAGGAACCCAGTTaGTTAGATGCTGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRGQEPS*LDAAAW
Trigger: CCAAGCAGCAGCATCTAACCAACTGGGTTCCTGGCC...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAGGTGGGCTGAAGGCCTaGGTTTGCTGCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: GWDYALCPILQLEKPDILGGLKA*VCCCCC
Trigger: GCAGCAACAGCAGCAAACCCAGGCCTTCAGCCCACC...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GAAGAGAGAAAACACCCTGCTCGTTTATTAACAGTGTGCCTTGGAGTTGAAAACGGTGGGCTGAAGGCCTaGGTTTGCTGCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: EERKHPARLLTVCLGVENGGLKA*VCCCCC
Trigger: GCAGCAACAGCAGCAAACCCAGGCCTTCAGCCCACC...GTTTTCAACTCCAAGGCACACTGTTAATAAACGAGCAGGGTGTTTTCTCTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATGCGGGTGTTGCATCATaGGATTCTGGGAGGGACCCA +
Preference number: 4 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHAGVAS*DSGRDP
Trigger: TGGGTCCCTCCCAGAATCCCATGATGCAACACCCGC...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGTTAAGAAAACCCTGCTaGGAGCTCACCTGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRLRKPC*ELTWGC
Trigger: GCAGCCCCAGGTGAGCTCCCAGCAGGGTTTTCTTAA...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371998.8
CDS-3UTR TCA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATATCATAGCTCGTGGCTaGGACAGGGCAAAGCACTGC +
Preference number: 4 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHIIARG*DRAKHC
Trigger: GCAGTGCTTTGCCCTGTCTCAGCCACGAGCTATGAT...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACCTGGTAGGAAGATGGTaGTTGCATGCCTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHLVGRW*LHAWPR
Trigger: CCTGGGCCAGGCATGCAATCACCATCTTCCTACCAG...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GAAGAGAGAAAACACCCTGCTCGTTTATTAACAGTGTGCCTTGGAGTTGAAAACCTGGTAGGAAGATGGTaGTTGCATGCCTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: EERKHPARLLTVCLGVENLVGRW*LHAWPR
Trigger: CCTGGGCCAGGCATGCAATCACCATCTTCCTACCAG...GTTTTCAACTCCAAGGCACACTGTTAATAAACGAGCAGGGTGTTTTCTCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGTTAGCTGCTCCTGCTTaGCAACATTTCCGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRLAAPA*QHFRPH
Trigger: GTGGGGACGGAAATGTTGTCAAGCAGGAGCAGCTAA...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGTGGCATCTGTGTTGCTaGGAAGAGTGTGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRWHLCC*EECAAG
Trigger: ACCAGCTGCACACTCTTCTCAGCAACACAGATGCCA...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGTGGCATCTGTGTTGCTaGGAAGAGTGTGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRWHLCC*EECAAG
Trigger: ACCAGCTGCACACTCTTCTCAGCAACACAGATGCCA...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTGTCCGGGGTCTCATaGTGTTGGCTCGTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHLSGVS*CWLVGA
Trigger: TGCACCCACGAGCCAACATCATGAGACCCCGGACAA...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GGTCAACACAGAACTACTACACCTGAAGGCTGGGACTATGCTCTTTGTCCAATAGGAGGGACCCATTCTTaGCGACATCATTGCATTGGG +
Preference number: 4 (lower is better)
Translates to: GQHRTTTPEGWDYALCPIGGTHS*RHHCIG
Trigger: CCCAATGCAATGATGTCGTCAAGAATGGGTCCCTCC...TATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGGGAGGGACCCATTCTTaGCGACATCATTGCATTGGG +
Preference number: 4 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRGGTHS*RHHCIG
Trigger: CCCAATGCAATGATGTCGTCAAGAATGGGTCCCTCC...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GGTCAACACAGAACTACTACACCTGAAGGCTGGGACTATGCTCTTTGTCCAATATTGGCGACATACTCATaGCGCCTACCGAACTGTTGC +
Preference number: 4 (lower is better)
Translates to: GQHRTTTPEGWDYALCPILATYS*RLPNCC
Trigger: GCAACAGTTCGGTAGGCGGCATGAGTATGTCGCCAA...TATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACCCAAGCCATAGGCCCTaGTGCTCGGCATCTGTAAGC +
Preference number: 4 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYPSHRP*CSASVS
Trigger: GCTTACAGATGCCGAGCAGCAGGGCCTATGGCTTGG...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTGTGGTGCTAGGGTCTaGCAAGCCATAGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHCGARV*QAIGPA
Trigger: AGCAGGGCCTATGGCTTGGCAGACCCTAGCACCACA...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATCTAGCTCCACTCATCTaGCCTGTGGTGCTAGGGTCT +
Preference number: 4 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHLAPLI*PVVLGS
Trigger: AGACCCTAGCACCACAGGGCAGATGAGTGGAGCTAG...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGAAGATGGTGATTGCATaGCTGGCCCAGGGGTCAATG +
Preference number: 4 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRKMVIA*LAQGSM
Trigger: CATTGACCCCTGGGCCAGGCATGCAATCACCATCTT...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGACCCCTTTGATTCTCTaGCCCCTCAACACTGCTCTC +
Preference number: 4 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRTPLIL*PLNTAL
Trigger: GAGAGCAGTGTTGAGGGGGCAGAGAATCAAAGGGGT...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GGTCAACACAGAACTACTACACCTGAAGGCTGGGACTATGCTCTTTGTCCAATACATTGGAGGCCCCTGTaGTGGGTATGTCTGTCCATA +
Preference number: 4 (lower is better)
Translates to: GQHRTTTPEGWDYALCPIHWRPL*WVCLSI
Trigger: TATGGACAGACATACCCAGCACAGGGGCCTCCAATG...TATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGGACTTAGCAGCTCTCTaGTGCGTTGGGCGACCATTT +
Preference number: 4 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRDLAAL*CVGRPF
Trigger: AAATGGTCGCCCAACGCAGCAGAGAGCTGCTAAGTC...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GGTCAACACAGAACTACTACACCTGAAGGCTGGGACTATGCTCTTTGTCCAATATGTTGCTGCTGCTGCTaGTGCTGCATCATCATAGCC +
Preference number: 4 (lower is better)
Translates to: GQHRTTTPEGWDYALCPICCCCC*CCIIIA
Trigger: GGCTATGATGATGCAGCAGCAGCAGCAGCAGCAACA...TATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACGAGCTCACCTGGGGCTaGATCATAGGCCTCATCACC +
Preference number: 4 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYELTWG*IIGLIT
Trigger: GGTGATGAGGCCTATGATGCAGCCCCAGGTGAGCTC...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371998.8
CDS-3UTR CCA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGCTGAGGACTGATAGATaGATGCAGCCTGCGGGTGTT +
Preference number: 4 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRLRTDR*MQPAGV
Trigger: AACACCCGCAGGCTGCATCCATCTATCAGTCCTCAG...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAAACTGCAGGATTCCCCTaGTGGGCAAACTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKTAGFP*WANCCW
Trigger: CCAGCAGCAGTTTGCCCACCAGGGGAATCCTGCAGT...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGCTGAAGGAAGTGGGTTaGGACAAAGCCATGTCGATC +
Preference number: 4 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRLKEVG*DKAMSI
Trigger: GATCGACATGGCTTTGTCTCAACCCACTTCCTTCAG...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATGGCTACCTCAGCTGGTaGATTCCCATTCTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHGYLSW*IPILQQ
Trigger: TTGCTGCAGAATGGGAATTCACCAGCTGAGGTAGCC...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGATGCCTGTCCCTGATTaGCAAGTTCAGGAATGCCCA +
Preference number: 4 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRMPVPD*QVQECP
Trigger: TGGGCATTCCTGAACTTGTCAATCAGGGACAGGCAT...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAACCCTGCAGCCTCTGCTaGAGCTGCATTCTAAGTTGC +
Preference number: 4 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKPCSLC*SCILSC
Trigger: GCAACTTAGAATGCAGCTTCAGCAGAGGCTGCAGGG...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACAGCCATAGGCCCTGCTaGTCGGCATCTGTAAGCCTT +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHSHRPC*SASVSL
Trigger: AAGGCTTACAGATGCCGAGCAGCAGGGCCTATGGCT...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAACCAAGCCATAGGCCCTaGTGCTCGGCATCTGTAAGC +
Preference number: 4 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQEPSHRP*CSASVS
Trigger: GCTTACAGATGCCGAGCAGCAGGGCCTATGGCTTGG...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAATGTGGTGCTAGGGTCTaGCAAGCCATAGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQECGARV*QAIGPA
Trigger: AGCAGGGCCTATGGCTTGGCAGACCCTAGCACCACA...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACCTAGCTCCACTCATCTaGCCTGTGGTGCTAGGGTCT +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHLAPLI*PVVLGS
Trigger: AGACCCTAGCACCACAGGGCAGATGAGTGGAGCTAG...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGTGTGGTTCCCAGTATTaGCAGAAGATGCCATGGGAG +
Preference number: 4 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRCGSQY*QKMPWE
Trigger: CTCCCATGGCATCTTCTGGCAATACTGGGAACCACA...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTACCTTCACTGATGGCTTaGAGGGCACTGAGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: GWDYALCPILQLEKPDILPSLMA*RALREL
Trigger: CAGCTCTCTCAGTGCCCTGCAAGCCATCAGTGAAGG...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGGCTATCCAGAGACACTaGTCGGTTATATGGAGGACG +
Preference number: 4 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRAIQRH*SVIWRT
Trigger: CGTCCTCCATATAACCGAGCAGTGTCTCTGGATAGC...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGAGCTGCATTCTAAGTTaGTTGGGGGTGTTTGTCCGG +
Preference number: 4 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRSCILS*LGVFVR
Trigger: CCGGACAAACACCCCCAAGCAACTTAGAATGCAGCT...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAAAACCCTGCTGGGGCTaGATCATAGGCCTCATCACC +
Preference number: 4 (lower is better)
Translates to: GWDYALCPILQLEKPDILKPCWG*IIGLIT
Trigger: GGTGATGAGGCCTATGATGCAGCCCCAGCAGGGTTT...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371997.3
ENST00000372004.7
CDS-3UTR GCA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATGACTTAGCAGCTCTCTaGTGCGTTGGGCGACCATTT +
Preference number: 4 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHDLAAL*CVGRPF
Trigger: AAATGGTCGCCCAACGCAGCAGAGAGCTGCTAAGTC...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTGCTGCTGCTGCTGCTaGATCATCATAGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHCCCCC*IIIATL
Trigger: GAGGGTGGCTATGATGATGCAGCAGCAGCAGCAGCA...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGTGCTGTTGCTGCTGCTaGTGCTGCTGCATCATCATA +
Preference number: 4 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRCCCCC*CCCIII
Trigger: TATGATGATGCAGCAGCAGCAGCAGCAGCAACAGCA...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATTGGCATTGTGGGTCCTaGCAAAAGCCCATCCATGCT +
Preference number: 4 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHWHCGS*QKPIHA
Trigger: AGCATGGATGGGCTTTTGGCAGGACCCACAATGCCA...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATCCCTGGTGGGCAAACTaGTGCTGGGAAAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDPWWAN*CWEKEL
Trigger: CAGCTCCTTTTCCCAGCAGCAGTTTGCCCACCAGGG...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGCCCTGGTGGGCAAACTaGTGCTGGGAAAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRPWWAN*CWEKEL
Trigger: CAGCTCCTTTTCCCAGCAGCAGTTTGCCCACCAGGG...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GAAGAGAGAAAACACCCTGCTCGTTTATTAACAGTGTGCCTTGGAGTTGAAAACACCAGGACTCCCATGTaGGGGGCTACTCATGTTGAG +
Preference number: 4 (lower is better)
Translates to: EERKHPARLLTVCLGVENTRTPM*GATHVE
Trigger: CTCAACATGAGTAGCCCCCCACATGGGAGTCCTGGT...GTTTTCAACTCCAAGGCACACTGTTAATAAACGAGCAGGGTGTTTTCTCTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATTGCCAGAAGATGCCATaGGAGAGTGCACACCTGCAA +
Preference number: 4 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHCQKMP*ESAHLQ
Trigger: TTGCAGGTGTGCACTCTCCCATGGCATCTTCTGGCA...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGCTGCTGTTGCAATACTaGTCTCGCACCTGGTATGCT +
Preference number: 4 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRLLLQY*SRTWYA
Trigger: AGCATACCAGGTGCGAGACCAGTATTGCAACAGCAG...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GGTCAACACAGAACTACTACACCTGAAGGCTGGGACTATGCTCTTTGTCCAATACTGCTGTTGCAATACTaGTCTCGCACCTGGTATGCT +
Preference number: 4 (lower is better)
Translates to: GQHRTTTPEGWDYALCPILLLQY*SRTWYA
Trigger: AGCATACCAGGTGCGAGACCAGTATTGCAACAGCAG...TATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGTTCCAGGTTGGAAGGTaGCCCAACAAGATCATCCAG +
Preference number: 4 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRFQVGR*PNKIIQ
Trigger: CTGGATGATCTTGTTGGGCCACCTTCCAACCTGGAA...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACAAAGCCTCCTTGCATTaGAGGCCCCTGTGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHKASLH*RPLCWV
Trigger: TACCCAGCACAGGGGCCTCCAATGCAAGGAGGCTTT...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAAAAGCCTCCTTGCATTaGAGGCCCCTGTGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: GWDYALCPILQLEKPDILKASLH*RPLCWV
Trigger: TACCCAGCACAGGGGCCTCCAATGCAAGGAGGCTTT...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATGAGCTTGTGGCATTGTaGGTCCTGCCAAAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHELVAL*VLPKAH
Trigger: ATGGGCTTTTGGCAGGACCCACAATGCCACAAGCTC...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACTTGCGGAGGAGCTTGTaGCATTGTGGGTCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYLRRSL*HCGSCQ
Trigger: TTGGCAGGACCCACAATGCCACAAGCTCCTCCGCAA...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGCACTCGACCAAAGGCTaGATCTGGTTGTTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRHSTKG*IWLLSH
Trigger: ATGGGACAACAACCAGATCCAGCCTTTGGTCGAGTG...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTGCGGGTGTTGCATCATaGGATTCTGGGAGGGACCCA +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFAGVAS*DSGRDP
Trigger: TGGGTCCCTCCCAGAATCCCATGATGCAACACCCGC...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTGCAGGATTCCCCTGGTaGGCAAACTGCTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVAGFPW*ANCCWE
Trigger: TTCCCAGCAGCAGTTTGCCCACCAGGGGAATCCTGC...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATGCAGGATTCCCCTGGTaGGCAAACTGCTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDAGFPW*ANCCWE
Trigger: TTCCCAGCAGCAGTTTGCCCACCAGGGGAATCCTGC...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGCAATTTGCGTTTTCGTaGATCACTGGCCAGTGGATC +
Preference number: 4 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRQFAFS*ITGQWI
Trigger: GATCCACTGGCCAGTGATTCACGAAAACGCAAATTG...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTATGGCCCAGGGGTCAATaGAGCTATGTTACTGGAACC +
Preference number: 4 (lower is better)
Translates to: GWDYALCPILQLEKPDILWPRGQ*SYVTGT
Trigger: GGTTCCAGTAACATAGCTTCATTGACCCCTGGGCCA...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACTGGCCCAGGGGTCAATaGAGCTATGTTACTGGAACC +
Preference number: 4 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYWPRGQ*SYVTGT
Trigger: GGTTCCAGTAACATAGCTTCATTGACCCCTGGGCCA...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GAAGAGAGAAAACACCCTGCTCGTTTATTAACAGTGTGCCTTGGAGTTGAAAACGGCTACCTCAGCTGGTaGATTCCCATTCTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: EERKHPARLLTVCLGVENGYLSW*IPILQQ
Trigger: TTGCTGCAGAATGGGAATTCACCAGCTGAGGTAGCC...GTTTTCAACTCCAAGGCACACTGTTAATAAACGAGCAGGGTGTTTTCTCTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACTTAGCTGCTCCTGCTTaGCAACATTTCCGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYLAAPA*QHFRPH
Trigger: GTGGGGACGGAAATGTTGTCAAGCAGGAGCAGCTAA...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGGTCTTTCTCTTGACTTaGGCTAGGAATGGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRVFLLT*ARNGGA
Trigger: AGCTCCACCATTCCTAGCTCAAGTCAAGAGAAAGAC...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTATCACCAGGCCTCATTTaGAGCATCTGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: GWDYALCPILQLEKPDILSPGLI*SICCCC
Trigger: ACAGCAGCAGCAGATGCTTCAAATGAGGCCTGGTGA...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATATGCCTGTCCCTGATTaGCAAGTTCAGGAATGCCCA +
Preference number: 4 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHMPVPD*QVQECP
Trigger: TGGGCATTCCTGAACTTGTCAATCAGGGACAGGCAT...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATCCCTGCAGCCTCTGCTaGAGCTGCATTCTAAGTTGC +
Preference number: 4 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDPCSLC*SCILSC
Trigger: GCAACTTAGAATGCAGCTTCAGCAGAGGCTGCAGGG...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTAGTGCCTGTCGGCTCTaGTTCAAAAACTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFSACRL*FKNCWP
Trigger: GGGCCAGCAGTTTTTGAATCAGAGCCGACAGGCACT...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACCCTGGCCAAATTTCCTaGTGGCCAGCCCTTCATTTC +
Preference number: 4 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYPGQIS*WPALHF
Trigger: GAAATGAAGGGCTGGCCATCAGGAAATTTGGCCAGG...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTACCTGGCCAAATTTCCTaGTGGCCAGCCCTTCATTTC +
Preference number: 4 (lower is better)
Translates to: GWDYALCPILQLEKPDILPGQIS*WPALHF
Trigger: GAAATGAAGGGCTGGCCATCAGGAAATTTGGCCAGG...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGTGTCAGCAGTATTTCTaGTCAGGACCCATAGGCATG +
Preference number: 4 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRCQQYF*SGPIGM
Trigger: CATGCCTATGGGTCCTGATCAGAAATACTGCTGACA...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTGGCGACATACTCATaGCGCCTACCGAACTGTTGC +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHLATYS*RLPNCC
Trigger: GCAACAGTTCGGTAGGCGGCATGAGTATGTCGCCAA...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATCTAGCTCCACTCATCTaGCCTGTGGTGCTAGGGTCT +
Preference number: 4 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDLAPLI*PVVLGS
Trigger: AGACCCTAGCACCACAGGGCAGATGAGTGGAGCTAG...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACAAGATGGTGATTGCATaGCTGGCCCAGGGGTCAATG +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHKMVIA*LAQGSM
Trigger: CATTGACCCCTGGGCCAGGCATGCAATCACCATCTT...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATGGGAGAGTGCACACCTaGAACAGGAGAAAACTGATG +
Preference number: 4 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHGRVHT*NRRKLM
Trigger: CATCAGTTTTCTCCTGTTGCAGGTGTGCACTCTCCC...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAAGATGCCATGGGAGAGTaGACACCTGCAACAGGAGAA +
Preference number: 4 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKDAMGE*TPATGE
Trigger: TTCTCCTGTTGCAGGTGTGCACTCTCCCATGGCATC...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAACCTTCACTGATGGCTTaGAGGGCACTGAGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQEPSLMA*RALREL
Trigger: CAGCTCTCTCAGTGCCCTGCAAGCCATCAGTGAAGG...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACACCCCTTTGATTCTCTaGCCCCTCAACACTGCTCTC +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHTPLIL*PLNTAL
Trigger: GAGAGCAGTGTTGAGGGGGCAGAGAATCAAAGGGGT...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACACCCAGTTGGTTAGATaGTGCTGCTTGGCCATAGGG +
Preference number: 4 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYTQLVR*CCLAIG
Trigger: CCCTATGGCCAAGCAGCAGCATCTAACCAACTGGGT...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAAACCCAGTTGGTTAGATaGTGCTGCTTGGCCATAGGG +
Preference number: 4 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKTQLVR*CCLAIG
Trigger: CCCTATGGCCAAGCAGCAGCATCTAACCAACTGGGT...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTACATTGGAGGCCCCTGTaGTGGGTATGTCTGTCCATA +
Preference number: 4 (lower is better)
Translates to: GWDYALCPILQLEKPDILHWRPL*WVCLSI
Trigger: TATGGACAGACATACCCAGCACAGGGGCCTCCAATG...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATAAACCCTGCTGGGGCTaGATCATAGGCCTCATCACC +
Preference number: 4 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDKPCWG*IIGLIT
Trigger: GGTGATGAGGCCTATGATGCAGCCCCAGCAGGGTTT...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371997.3
ENST00000372004.7
CDS-3UTR GCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTTGCTGCTGCTGCTGCTaGATCATCATAGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFCCCCC*IIIATL
Trigger: GAGGGTGGCTATGATGATGCAGCAGCAGCAGCAGCA...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTTGCTGCTGCTGCTGCTaGTGCATCATCATAGCCACC +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFCCCCC*CIIIAT
Trigger: GGTGGCTATGATGATGCAGCAGCAGCAGCAGCAGCA...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAATGCTGCTGCTGCTGCTaGTGCATCATCATAGCCACC +
Preference number: 4 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQECCCCC*CIIIAT
Trigger: GGTGGCTATGATGATGCAGCAGCAGCAGCAGCAGCA...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAATGTTGCTGCTGCTGCTaGTGCTGCATCATCATAGCC +
Preference number: 4 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKCCCCC*CCIIIA
Trigger: GGCTATGATGATGCAGCAGCAGCAGCAGCAGCAACA...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACAAGGCCTGGGTTTGCTaGTGTTGCTGCTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHKAWVC*CCCCCC
Trigger: ACAGCAACAGCAGCAACAGCAGCAAACCCAGGCCTT...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAAAGGCCTGGGTTTGCTaGTGTTGCTGCTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: GWDYALCPILQLEKPDILKAWVC*CCCCCC
Trigger: ACAGCAACAGCAGCAACAGCAGCAAACCCAGGCCTT...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTACCAAAAGCCCATCCATaGTGGGGGAAGCAGTCACAT +
Preference number: 4 (lower is better)
Translates to: GWDYALCPILQLEKPDILPKAHP*WGKQSH
Trigger: ATGTGACTGCTTCCCCCAGCATGGATGGGCTTTTGG...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACTGGCATTGTGGGTCCTaGCAAAAGCCCATCCATGCT +
Preference number: 4 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYWHCGS*QKPIHA
Trigger: AGCATGGATGGGCTTTTGGCAGGACCCACAATGCCA...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAACACCATACTATACACTaGAGGATTCCCCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKHHTIH*RIPLVG
Trigger: GCCCACCAGGGGAATCCTGCAGTGTATAGTATGGTG...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGGGCGCATTTCAGGACTaGCGTTTATGTCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRGAFQD*RLCLPE
Trigger: TTCTGGAAGACATAAACGCCAGTCCTGAAATGCGCC...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATACCAGGACTCCCATGTaGGGGGCTACTCATGTTGAG +
Preference number: 4 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDTRTPM*GATHVE
Trigger: CTCAACATGAGTAGCCCCCCACATGGGAGTCCTGGT...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAGATATTCTGCTGGTTTaGGGCAAGACCAGGACTCCC +
Preference number: 4 (lower is better)
Translates to: GWDYALCPILQLEKPDILDILLV*GKTRTP
Trigger: GGGAGTCCTGGTCTTGCCCCAAACCAGCAGAATATC...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GAAGAGAGAAAACACCCTGCTCGTTTATTAACAGTGTGCCTTGGAGTTGAAAACGATATTCTGCTGGTTTaGGGCAAGACCAGGACTCCC +
Preference number: 4 (lower is better)
Translates to: EERKHPARLLTVCLGVENDILLV*GKTRTP
Trigger: GGGAGTCCTGGTCTTGCCCCAAACCAGCAGAATATC...GTTTTCAACTCCAAGGCACACTGTTAATAAACGAGCAGGGTGTTTTCTCTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACTGCCAGAAGATGCCATaGGAGAGTGCACACCTGCAA +
Preference number: 4 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYCQKMP*ESAHLQ
Trigger: TTGCAGGTGTGCACTCTCCCATGGCATCTTCTGGCA...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGCTGCTGGAAAAGCTGTaGTTCCCAGTATTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRLLEKL*FPVLPE
Trigger: TTCTGGCAATACTGGGAACCACAGCTTTTCCAGCAG...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GGTCAACACAGAACTACTACACCTGAAGGCTGGGACTATGCTCTTTGTCCAATATCCACTCCTTCCACTTaGGGCTGTAGTTCTTTAGAG +
Preference number: 4 (lower is better)
Translates to: GQHRTTTPEGWDYALCPISTPST*GCSSLE
Trigger: CTCTAAAGAACTACAGCCCCAAGTGGAAGGAGTGGA...TATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGTCCACTCCTTCCACTTaGGGCTGTAGTTCTTTAGAG +
Preference number: 4 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRSTPST*GCSSLE
Trigger: CTCTAAAGAACTACAGCCCCAAGTGGAAGGAGTGGA...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGGATTCCCACCCAACATaGGTTGCTTTGGTAACATGG +
Preference number: 4 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRDSHPT*VALVTW
Trigger: CCATGTTACCAAAGCAACCCATGTTGGGTGGGAATC...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTGGCCAGGAACCCAGTTaGTTAGATGCTGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVGQEPS*LDAAAW
Trigger: CCAAGCAGCAGCATCTAACCAACTGGGTTCCTGGCC...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTGGCCAGGAACCCAGTTaGTTAGATGCTGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFGQEPS*LDAAAW
Trigger: CCAAGCAGCAGCATCTAACCAACTGGGTTCCTGGCC...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATGAGAAACTTGTTCCATaGACAACATGCCATCGGGCC +
Preference number: 4 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHEKLVP*TTCHRA
Trigger: GGCCCGATGGCATGTTGTCCATGGAACAAGTTTCTC...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAGCTCTTTCGTCACTCTaGCCTTCCAGGTTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: GWDYALCPILQLEKPDILALSSL*PSRLEG
Trigger: ACCTTCCAACCTGGAAGGCCAGAGTGACGAAAGAGC...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATAAAGCCTCCTTGCATTaGAGGCCCCTGTGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDKASLH*RPLCWV
Trigger: TACCCAGCACAGGGGCCTCCAATGCAAGGAGGCTTT...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACCATGATGTTGGCTCGTaGGTGCATTCCTTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHHDVGS*VHSLER
Trigger: CCTCTCCAAGGAATGCACCCACGAGCCAACATCATG...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GAAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATCTTTCTTAGATGGTGGGCTGAAGGCCTaGGTTTGCTGCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: EKHRPLQWKFSDLQSFLDGGLKA*VCCCCC
Trigger: GCAGCAACAGCAGCAAACCCAGGCCTTCAGCCCACC...ATCTAAGAAAGATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAAAGTCACATTAGGAGGTaGGCTGAAGGCCTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKSHIRR*AEGLGL
Trigger: CAAACCCAGGCCTTCAGCCCACCTCCTAATGTGACT...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACAGTCACATTAGGAGGTaGGCTGAAGGCCTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYSHIRR*AEGLGL
Trigger: CAAACCCAGGCCTTCAGCCCACCTCCTAATGTGACT...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GAAGAGAGAAAACACCCTGCTCGTTTATTAACAGTGTGCCTTGGAGTTGAAAACGAGCTTGTGGCATTGTaGGTCCTGCCAAAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: EERKHPARLLTVCLGVENELVAL*VLPKAH
Trigger: ATGGGCTTTTGGCAGGACCCACAATGCCACAAGCTC...GTTTTCAACTCCAAGGCACACTGTTAATAAACGAGCAGGGTGTTTTCTCTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTTTGCGGAGGAGCTTGTaGCATTGTGGGTCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFLRRSL*HCGSCQ
Trigger: TTGGCAGGACCCACAATGCCACAAGCTCCTCCGCAA...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACCTGAGGACTGATAGATaGATGCAGCCTGCGGGTGTT +
Preference number: 4 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYLRTDR*MQPAGV
Trigger: AACACCCGCAGGCTGCATCCATCTATCAGTCCTCAG...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GGTCAACACAGAACTACTACACCTGAAGGCTGGGACTATGCTCTTTGTCCAATAACTACACCTGAAGGCTaGGACTATGCTCTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: GQHRTTTPEGWDYALCPITTPEG*DYALCP
Trigger: TGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGT...TATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GGTCAACACAGAACTACTACACCTGAAGGCTGGGACTATGCTCTTTGTCCAATAAAACCATCCAATGCCTaGAGTAAAAGCGGTCCTAAG +
Preference number: 4 (lower is better)
Translates to: GQHRTTTPEGWDYALCPIKPSNA*SKSGPK
Trigger: CTTAGGACCGCTTTTACTTCAGGCATTGGATGGTTT...TATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGAAACCATCCAATGCCTaGAGTAAAAGCGGTCCTAAG +
Preference number: 4 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRKPSNA*SKSGPK
Trigger: CTTAGGACCGCTTTTACTTCAGGCATTGGATGGTTT...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp CAACTCAACACCATTAGTAAAGGACAATTCAGAATCACCAATTCCACTGGACAAATCATAGCTCGTGGCTaGGACAGGGCAAAGCACTGC +
Preference number: 4 (lower is better)
Translates to: QLNTISKGQFRITNSTGQIIARG*DRAKHC
Trigger: GCAGTGCTTTGCCCTGTCTCAGCCACGAGCTATGAT...TTGTCCAGTGGAATTGGTGATTCTGAATTGTCCTTTACTAATGGTGTTGAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAACTGAAGGAAGTGGGTTaGGACAAAGCCATGTCGATC +
Preference number: 4 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKLKEVG*DKAMSI
Trigger: GATCGACATGGCTTTGTCTCAACCCACTTCCTTCAG...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACCTGAAGGAAGTGGGTTaGGACAAAGCCATGTCGATC +
Preference number: 4 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYLKEVG*DKAMSI
Trigger: GATCGACATGGCTTTGTCTCAACCCACTTCCTTCAG...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATCCATTCTGTTCTCTCTaGAGGAAGTGGGTTGAGACA +
Preference number: 4 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHPFCSL*RKWVET
Trigger: TGTCTCAACCCACTTCCTTCAGAGAGAACAGAATGG...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTTGGCCCAGGGGTCAATaGAGCTATGTTACTGGAACC +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFWPRGQ*SYVTGT
Trigger: GGTTCCAGTAACATAGCTTCATTGACCCCTGGGCCA...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTATTGGTCAAGGAGGAATaGCCCCGGTCATCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: GWDYALCPILQLEKPDILLVKEE*PRSSEE
Trigger: TTCTTCTGATGACCGGGGTCATTCCTCCTTGACCAA...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATGGCTACCTCAGCTGGTaGATTCCCATTCTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDGYLSW*IPILQQ
Trigger: TTGCTGCAGAATGGGAATTCACCAGCTGAGGTAGCC...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGTTAGCTGCTCCTGCTTaGCAACATTTCCGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRLAAPA*QHFRPH
Trigger: GTGGGGACGGAAATGTTGTCAAGCAGGAGCAGCTAA...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAATCACCAGGCCTCATTTaGAGCATCTGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQESPGLI*SICCCC
Trigger: ACAGCAGCAGCAGATGCTTCAAATGAGGCCTGGTGA...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGTGGCATCTGTGTTGCTaGGAAGAGTGTGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRWHLCC*EECAAG
Trigger: ACCAGCTGCACACTCTTCTCAGCAACACAGATGCCA...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGTCTAATGCCTGTCCCTaGTTGACAAGTTCAGGAATG +
Preference number: 4 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRSNACP*LTSSGM
Trigger: CATTCCTGAACTTGTCAATCAGGGACAGGCATTAGA...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GAAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATCTTTCTTAGATTTGTCCGGGGTCTCATaGTGTTGGCTCGTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: EKHRPLQWKFSDLQSFLDLSGVS*CWLVGA
Trigger: TGCACCCACGAGCCAACATCATGAGACCCCGGACAA...ATCTAAGAAAGATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAACGTTGGGCGACCATTTaGGCATTAAGAAAACCCTGC +
Preference number: 4 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKRWATI*ALRKPC
Trigger: GCAGGGTTTTCTTAATGCTCAAATGGTCGCCCAACG...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACCCAGCCCTTCATTTCTaGGGACTGATAGATGGATGC +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHPALHF*GLIDGC
Trigger: GCATCCATCTATCAGTCCTCAGAAATGAAGGGCTGG...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAACCAGCCCTTCATTTCTaGGGACTGATAGATGGATGC +
Preference number: 4 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKPALHF*GLIDGC
Trigger: GCATCCATCTATCAGTCCTCAGAAATGAAGGGCTGG...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAACAGAACTACTACACCTaGAGGCTGGGACTATGCTCT +
Preference number: 4 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKQNYYT*RLGLCS
Trigger: AGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTG...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACCCATTTGGACATCCATaGCAGTTCCTGGAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHPFGHP*QFLEVK
Trigger: CTTCACCTCCAGGAACTGTCATGGATGTCCAAATGG...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GGTCAACACAGAACTACTACACCTGAAGGCTGGGACTATGCTCTTTGTCCAATAGTTAGACTGTGGCTCTaGATCACAGTAAAACTGGCT +
Preference number: 4 (lower is better)
Translates to: GQHRTTTPEGWDYALCPIVRLWL*ITVKLA
Trigger: AGCCAGTTTTACTGTGATTCAGAGCCACAGTCTAAC...TATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATTCCCTTCCTCCCAACTaGCTAAAACAGGTGTCAAAG +
Preference number: 4 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHSLPPN*LKQVSK
Trigger: CTTTGACACCTGTTTTAGTCAGTTGGGAGGAAGGGA...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATTGGCCCACCCATACTTaGGCCATAATTTTCCTGACT +
Preference number: 4 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHWPTHT*AIIFLT
Trigger: AGTCAGGAAAATTATGGCTCAAGTATGGGTGGGCCA...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGCCTGAGGAAGGAGTCTaGGTCACAGTCACATTTCGG +
Preference number: 4 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRPEEGV*VTVTFR
Trigger: CCGAAATGTGACTGTGACTCAGACTCCTTCCTCAGG...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAACCTGAGGAAGGAGTCTaGGTCACAGTCACATTTCGG +
Preference number: 4 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQEPEEGV*VTVTFR
Trigger: CCGAAATGTGACTGTGACTCAGACTCCTTCCTCAGG...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGTGTAGTAATGCGGCGTaGCACACAGATCATACAAGA +
Preference number: 4 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRCSNAA*HTDHTR
Trigger: TCTTGTATGATCTGTGTGGCACGCCGCATTACTACA...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTTTGGCGACATACTCATaGCGCCTACCGAACTGTTGC +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFLATYS*RLPNCC
Trigger: GCAACAGTTCGGTAGGCGGCATGAGTATGTCGCCAA...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAAGGGAGAGTGCACACCTaGAACAGGAGAAAACTGATG +
Preference number: 4 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKGRVHT*NRRKLM
Trigger: CATCAGTTTTCTCCTGTTGCAGGTGTGCACTCTCCC...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACGGGAGAGTGCACACCTaGAACAGGAGAAAACTGATG +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHGRVHT*NRRKLM
Trigger: CATCAGTTTTCTCCTGTTGCAGGTGTGCACTCTCCC...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTGATGCCATGGGAGAGTaGACACCTGCAACAGGAGAA +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFDAMGE*TPATGE
Trigger: TTCTCCTGTTGCAGGTGTGCACTCTCCCATGGCATC...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACTGTGGTTCCCAGTATTaGCAGAAGATGCCATGGGAG +
Preference number: 4 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYCGSQY*QKMPWE
Trigger: CTCCCATGGCATCTTCTGGCAATACTGGGAACCACA...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACGGACTTAGCTGCTCCTaGTTGACAACATTTCCGTCC +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHGLSCS*LTTFPS
Trigger: GGACGGAAATGTTGTCAAGCAGGAGCAGCTAAGTCC...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGGGAGGACGAATAGACTaGACAGACTGTGAACTTTTC +
Preference number: 4 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRGGRID*TDCELF
Trigger: GAAAAGTTCACAGTCTGTGCAGTCTATTCGTCCTCC...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACGCTATCCAGAGACACTaGTCGGTTATATGGAGGACG +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHAIQRH*SVIWRT
Trigger: CGTCCTCCATATAACCGAGCAGTGTCTCTGGATAGC...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACATCTGCTGCTGCTGTTaGAATACTGGTCTCGCACCT +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHICCCC*NTGLAP
Trigger: AGGTGCGAGACCAGTATTGCAACAGCAGCAGCAGAT...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTACCCAGTTGGTTAGATaGTGCTGCTTGGCCATAGGG +
Preference number: 4 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVTQLVR*CCLAIG
Trigger: CCCTATGGCCAAGCAGCAGCATCTAACCAACTGGGT...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAACATTGGAGGCCCCTGTaGTGGGTATGTCTGTCCATA +
Preference number: 4 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQEHWRPL*WVCLSI
Trigger: TATGGACAGACATACCCAGCACAGGGGCCTCCAATG...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAAAGCTGCATTCTAAGTTaGTTGGGGGTGTTTGTCCGG +
Preference number: 4 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKSCILS*LGVFVR
Trigger: CCGGACAAACACCCCCAAGCAACTTAGAATGCAGCT...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAATTAGCAGCTCTCTGCTaGGTTGGGCGACCATTTGAG +
Preference number: 4 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQELAALC*VGRPFE
Trigger: CTCAAATGGTCGCCCAACGCAGCAGAGAGCTGCTAA...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGTTAGCAGCTCTCTGCTaGGTTGGGCGACCATTTGAG +
Preference number: 4 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRLAALC*VGRPFE
Trigger: CTCAAATGGTCGCCCAACGCAGCAGAGAGCTGCTAA...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATGACTTAGCAGCTCTCTaGTGCGTTGGGCGACCATTT +
Preference number: 4 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDDLAAL*CVGRPF
Trigger: AAATGGTCGCCCAACGCAGCAGAGAGCTGCTAAGTC...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTATGCTGTTGCTGCTGCTaGTGCTGCTGCATCATCATA +
Preference number: 4 (lower is better)
Translates to: GWDYALCPILQLEKPDILCCCCC*CCCIII
Trigger: TATGATGATGCAGCAGCAGCAGCAGCAGCAACAGCA...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GAAGAGAGAAAACACCCTGCTCGTTTATTAACAGTGTGCCTTGGAGTTGAAAACTGCTGTTGCTGCTGCTaGTGCTGCTGCATCATCATA +
Preference number: 4 (lower is better)
Translates to: EERKHPARLLTVCLGVENCCCCC*CCCIII
Trigger: TATGATGATGCAGCAGCAGCAGCAGCAGCAACAGCA...GTTTTCAACTCCAAGGCACACTGTTAATAAACGAGCAGGGTGTTTTCTCTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATTGGCATTGTGGGTCCTaGCAAAAGCCCATCCATGCT +
Preference number: 4 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDWHCGS*QKPIHA
Trigger: AGCATGGATGGGCTTTTGGCAGGACCCACAATGCCA...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATGGACTGATAGATGGATaGAGCCTGCGGGTGTTGCAT +
Preference number: 4 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDGLIDG*SLRVLH
Trigger: ATGCAACACCCGCAGGCTGCATCCATCTATCAGTCC...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTGGACTGATAGATGGATaGAGCCTGCGGGTGTTGCAT +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFGLIDG*SLRVLH
Trigger: ATGCAACACCCGCAGGCTGCATCCATCTATCAGTCC...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTTGGTGGGCAAACTGCTaGTGGGAAAAGGAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFWWANC*WEKELF
Trigger: GAACAGCTCCTTTTCCCAGCAGCAGTTTGCCCACCA...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGCACCATACTATACACTaGAGGATTCCCCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRHHTIH*RIPLVG
Trigger: GCCCACCAGGGGAATCCTGCAGTGTATAGTATGGTG...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGGATTCTGATTCAGAATaGAGTACCTGGCCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRDSDSE*STWPWV
Trigger: AACCCAAGGCCAGGTACTGCATTCTGAATCAGAATC...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGGATTCTGATTCAGAATaGAGTACCTGGCCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRDSDSE*STWPWV
Trigger: AACCCAAGGCCAGGTACTGCATTCTGAATCAGAATC...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTCCATCATAGCTCGTaGCTGAGACAGGGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVLHHSS*LRQGKA
Trigger: TGCTTTGCCCTGTCTCAGCCACGAGCTATGATGGAG...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GGTCAACACAGAACTACTACACCTGAAGGCTGGGACTATGCTCTTTGTCCAATACGAGAATCGATATACTaGGGTTTCTGCATGGCCATT +
Preference number: 4 (lower is better)
Translates to: GQHRTTTPEGWDYALCPIRESIY*GFCMAI
Trigger: AATGGCCATGCAGAAACCCCAGTATATCGATTCTCG...TATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTGATATTCTGCTGGTTTaGGGCAAGACCAGGACTCCC +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFDILLV*GKTRTP
Trigger: GGGAGTCCTGGTCTTGCCCCAAACCAGCAGAATATC...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATTGCCAGAAGATGCCATaGGAGAGTGCACACCTGCAA +
Preference number: 4 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDCQKMP*ESAHLQ
Trigger: TTGCAGGTGTGCACTCTCCCATGGCATCTTCTGGCA...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGACTATCCATCATTCTTaGATTCCCACCCAACATGGG +
Preference number: 4 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRTIHHS*IPTQHG
Trigger: CCCATGTTGGGTGGGAATCCAAGAATGATGGATAGT...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAAGAGAAACTTGTTCCATaGACAACATGCCATCGGGCC +
Preference number: 4 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKEKLVP*TTCHRA
Trigger: GGCCCGATGGCATGTTGTCCATGGAACAAGTTTCTC...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACGAGAAACTTGTTCCATaGACAACATGCCATCGGGCC +
Preference number: 4 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYEKLVP*TTCHRA
Trigger: GGCCCGATGGCATGTTGTCCATGGAACAAGTTTCTC...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACTTCCAGGTTGGAAGGTaGCCCAACAAGATCATCCAG +
Preference number: 4 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYFQVGR*PNKIIQ
Trigger: CTGGATGATCTTGTTGGGCCACCTTCCAACCTGGAA...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTGCTCTTTCGTCACTCTaGCCTTCCAGGTTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFALSSL*PSRLEG
Trigger: ACCTTCCAACCTGGAAGGCCAGAGTGACGAAAGAGC...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAAGCTCTTTCGTCACTCTaGCCTTCCAGGTTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQEALSSL*PSRLEG
Trigger: ACCTTCCAACCTGGAAGGCCAGAGTGACGAAAGAGC...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACGGAAAGCATCCTGTTTaGGCTCTAATGCCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYGKHPV*ALMPVP
Trigger: AGGGACAGGCATTAGAGCCCAAACAGGATGCTTTCC...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAGGAAAGCATCCTGTTTaGGCTCTAATGCCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: GWDYALCPILQLEKPDILGKHPV*ALMPVP
Trigger: AGGGACAGGCATTAGAGCCCAAACAGGATGCTTTCC...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAACGTGGGTGCATTCCTTaGAGAGGAAAATTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKRGCIP*RGKLPC
Trigger: GCAAGGCAATTTTCCTCTCCAAGGAATGCACCCACG...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGCATGATGTTGGCTCGTaGGTGCATTCCTTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRHDVGS*VHSLER
Trigger: CCTCTCCAAGGAATGCACCCACGAGCCAACATCATG...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTATTAAGAAAACCCTGCTaGGGCTGCATCATAGGCCTC +
Preference number: 4 (lower is better)
Translates to: GWDYALCPILQLEKPDILLRKPC*GCIIGL
Trigger: GAGGCCTATGATGCAGCCCCAGCAGGGTTTTCTTAA...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371997.3
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATGAGCTTGTGGCATTGTaGGTCCTGCCAAAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDELVAL*VLPKAH
Trigger: ATGGGCTTTTGGCAGGACCCACAATGCCACAAGCTC...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACCACTCGACCAAAGGCTaGATCTGGTTGTTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYHSTKG*IWLLSH
Trigger: ATGGGACAACAACCAGATCCAGCCTTTGGTCGAGTG...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACTGCATCATGGGATTCTaGGAGGGACCCATTCTTGAC +
Preference number: 4 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYCIMGF*EGPILD
Trigger: GTCAAGAATGGGTCCCTCCCAGAATCCCATGATGCA...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAATGCATCATGGGATTCTaGGAGGGACCCATTCTTGAC +
Preference number: 4 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKCIMGF*EGPILD
Trigger: GTCAAGAATGGGTCCCTCCCAGAATCCCATGATGCA...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTCTGAGGACTGATAGATaGATGCAGCCTGCGGGTGTT +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFLRTDR*MQPAGV
Trigger: AACACCCGCAGGCTGCATCCATCTATCAGTCCTCAG...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GAAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATCTTTCTTAGATACTGCAGGATTCCCCTaGTGGGCAAACTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: EKHRPLQWKFSDLQSFLDTAGFP*WANCCW
Trigger: CCAGCAGCAGTTTGCCCACCAGGGGAATCCTGCAGT...ATCTAAGAAAGATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp TTAGCATGTGAAAAGTTTGCTACTGCTGCGATTAAATACTGTCATCTCATTTCCACTGCAGGATTCCCCTaGTGGGCAAACTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LACEKFATAAIKYCHLISTAGFP*WANCCW
Trigger: CCAGCAGCAGTTTGCCCACCAGGGGAATCCTGCAGT...GGAAATGAGATGACAGTATTTAATCGCAGCAGTAGCAAACTTTTCACATGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATTTCCTTAAGAGGTCCTaGTGCAGAGATGTCAGCAGT +
Preference number: 4 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHFLKRS*CRDVSS
Trigger: ACTGCTGACATCTCTGCACCAGGACCTCTTAAGGAA...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GGTCAACACAGAACTACTACACCTGAAGGCTGGGACTATGCTCTTTGTCCAATATCCAAGATGGATGCCTaGAACAATGATTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: GQHRTTTPEGWDYALCPISKMDA*NNDSFP
Trigger: TGGGAAGGAATCATTGTTCCAGGCATCCATCTTGGA...TATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATGATGGAGCTCAAAGCTaGTCCTTTCTTCCAAGATGG +
Preference number: 4 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHDGAQS*SFLPRW
Trigger: CCATCTTGGAAGAAAGGACCAGCTTTGAGCTCCATC...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATAGCTGCACCCACCTCTaGATCAAAGAACTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHSCTHL*IKELLG
Trigger: TCCTAGAAGTTCTTTGATCCAGAGGTGGGTGCAGCT...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACCAATTTGCGTTTTCGTaGATCACTGGCCAGTGGATC +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHQFAFS*ITGQWI
Trigger: GATCCACTGGCCAGTGATTCACGAAAACGCAAATTG...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAATCTCTCTTGATATCATAGCTCGTGGCTaGGACAGGGCAAAGCACTGC +
Preference number: 4 (lower is better)
Translates to: ALCPILQLEKPDILISLDIIARG*DRAKHC
Trigger: GCAGTGCTTTGCCCTGTCTCAGCCACGAGCTATGAT...ATCAAGAGAGATTAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGAAAGCTCTCAGGGTTTaGTGGAAATGTTCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRKALRV*WKCSFS
Trigger: GGAGAAAGAACATTTCCATCAAACCCTGAGAGCTTT...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAAGGAGAAAACTGATGTaGGGCTATCTTTGGACTCCC +
Preference number: 4 (lower is better)
Translates to: GWDYALCPILQLEKPDILRRKLM*GYLWTP
Trigger: GGGAGTCCAAAGATAGCCTCACATCAGTTTTCTCCT...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GGTCAACACAGAACTACTACACCTGAAGGCTGGGACTATGCTCTTTGTCCAATAGGACTCTTGGAATCCTaGTTGCTTACTTTACTTGGT +
Preference number: 4 (lower is better)
Translates to: GQHRTTTPEGWDYALCPIGLLES*LLTLLG
Trigger: ACCAAGTAAAGTAAGCAATCAGGATTCCAAGAGTCC...TATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGTCTCTGCTATTTGACTaGCACATTGAACTCTCCACT +
Preference number: 4 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRSLLFD*HIELST
Trigger: AGTGGAGAGTTCAATGTGTCAGTCAAATAGCAGAGA...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAATTGGTCAAGGAGGAATaGCCCCGGTCATCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQELVKEE*PRSSEE
Trigger: TTCTTCTGATGACCGGGGTCATTCCTCCTTGACCAA...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAATCTCTCTTGATAGTGCCTGTCGGCTCTaGTTCAAAAACTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: ALCPILQLEKPDILISLDSACRL*FKNCWP
Trigger: GGGCCAGCAGTTTTTGAATCAGAGCCGACAGGCACT...ATCAAGAGAGATTAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCGTTGGGCGACCATTTaGGCATTAAGAAAACCCTGC +
Preference number: 4 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVRWATI*ALRKPC
Trigger: GCAGGGTTTTCTTAATGCTCAAATGGTCGCCCAACG...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGTTCATCTGTCCCATGTaGCCACTGCTGCCATTCATG +
Preference number: 4 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRFICPM*PLLPFM
Trigger: CATGAATGGCAGCAGTGGTCACATGGGACAGATGAA...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTTTCATCTGTCCCATGTaGCCACTGCTGCCATTCATG +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFFICPM*PLLPFM
Trigger: CATGAATGGCAGCAGTGGTCACATGGGACAGATGAA...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAATTCATCTGTCCCATGTaGCCACTGCTGCCATTCATG +
Preference number: 4 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQEFICPM*PLLPFM
Trigger: CATGAATGGCAGCAGTGGTCACATGGGACAGATGAA...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTATGTCAGCAGTATTTCTaGTCAGGACCCATAGGCATG +
Preference number: 4 (lower is better)
Translates to: GWDYALCPILQLEKPDILCQQYF*SGPIGM
Trigger: CATGCCTATGGGTCCTGATCAGAAATACTGCTGACA...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGCAGAACTACTACACCTaGAGGCTGGGACTATGCTCT +
Preference number: 4 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRQNYYT*RLGLCS
Trigger: AGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTG...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GGTCAACACAGAACTACTACACCTGAAGGCTGGGACTATGCTCTTTGTCCAATACAGATACAATTGAGCTaGAAAAGAGACAGACTGACC +
Preference number: 4 (lower is better)
Translates to: GQHRTTTPEGWDYALCPIQIQLS*KRDRLT
Trigger: GGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTG...TATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGAGGGTCAGATACAATTaGGCTGAAAAAGAGACAGAC +
Preference number: 4 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRRVRYN*AEKETD
Trigger: GTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCT...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGGAAATCATGATATTCTaGTGGTTTGGGGCAAGACCA +
Preference number: 4 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFREIMIF*WFGARP
Trigger: TGGTCTTGCCCCAAACCAGCAGAATATCATGATTTC...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp CAACTCAACACCATTAGTAAAGGACAATTCAGAATCACCAATTCCACTGGACAAACCCCTTTGATTCTCTaGCCCCTCAACACTGCTCTC +
Preference number: 4 (lower is better)
Translates to: QLNTISKGQFRITNSTGQTPLIL*PLNTAL
Trigger: GAGAGCAGTGTTGAGGGGGCAGAGAATCAAAGGGGT...TTGTCCAGTGGAATTGGTGATTCTGAATTGTCCTTTACTAATGGTGTTGAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATTTCTGCAGCAACTTGTaGAAAATCCGGTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHFCSNL*KIRCFS
Trigger: AGAGAAGCACCGGATTTTGCACAAGTTGCTGCAGAA...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAAGGACTTAGCTGCTCCTaGTTGACAACATTTCCGTCC +
Preference number: 4 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQEGLSCS*LTTFPS
Trigger: GGACGGAAATGTTGTCAAGCAGGAGCAGCTAAGTCC...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGGGACTTAGCTGCTCCTaGTTGACAACATTTCCGTCC +
Preference number: 4 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRGLSCS*LTTFPS
Trigger: GGACGGAAATGTTGTCAAGCAGGAGCAGCTAAGTCC...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACCCACCCAACATGGGTTaGTTTGGTAACATGGGGAAA +
Preference number: 4 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYPPNMG*FGNMGK
Trigger: TTTCCCCATGTTACCAAAGCAACCCATGTTGGGTGG...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATATCTGCTGCTGCTGTTaGAATACTGGTCTCGCACCT +
Preference number: 4 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDICCCC*NTGLAP
Trigger: AGGTGCGAGACCAGTATTGCAACAGCAGCAGCAGAT...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAACAGTTGGTTAGATGCTaGTGCTTGGCCATAGGGATT +
Preference number: 4 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKQLVRC*CLAIGI
Trigger: AATCCCTATGGCCAAGCAGCAGCATCTAACCAACTG...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACATGTTGGCTCGTGGGTaGATTCCTTGGAGAGGAAAA +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHMLARG*IPWRGK
Trigger: TTTTCCTCTCCAAGGAATGCACCCACGAGCCAACAT...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTAGCTGCATTCTAAGTTaGTTGGGGGTGTTTGTCCGG +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFSCILS*LGVFVR
Trigger: CCGGACAAACACCCCCAAGCAACTTAGAATGCAGCT...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp CAACTCAACACCATTAGTAAAGGACAATTCAGAATCACCAATTCCACTGGACAAAAGGCCTGGGTTTGCTaGTGTTGCTGCTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: QLNTISKGQFRITNSTGQKAWVC*CCCCCC
Trigger: ACAGCAACAGCAGCAACAGCAGCAAACCCAGGCCTT...TTGTCCAGTGGAATTGGTGATTCTGAATTGTCCTTTACTAATGGTGTTGAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GAAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATCTTTCTTAGATCTGAAGGCCTGGGTTTaGTGCTGTTGCTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: EKHRPLQWKFSDLQSFLDLKAWV*CCCCCC
Trigger: GCAACAGCAGCAACAGCAGCAAACCCAGGCCTTCAG...ATCTAAGAAAGATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp CAACTCAACACCATTAGTAAAGGACAATTCAGAATCACCAATTCCACTGGACAACCAAAAGCCCATCCATaGTGGGGGAAGCAGTCACAT +
Preference number: 4 (lower is better)
Translates to: QLNTISKGQFRITNSTGQPKAHP*WGKQSH
Trigger: ATGTGACTGCTTCCCCCAGCATGGATGGGCTTTTGG...TTGTCCAGTGGAATTGGTGATTCTGAATTGTCCTTTACTAATGGTGTTGAGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp CAACTCAACACCATTAGTAAAGGACAATTCAGAATCACCAATTCCACTGGACAAGGACTGATAGATGGATaGAGCCTGCGGGTGTTGCAT +
Preference number: 4 (lower is better)
Translates to: QLNTISKGQFRITNSTGQGLIDG*SLRVLH
Trigger: ATGCAACACCCGCAGGCTGCATCCATCTATCAGTCC...TTGTCCAGTGGAATTGGTGATTCTGAATTGTCCTTTACTAATGGTGTTGAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTCCATGTGACCACTGCTaGCATTCATGTGCACCATAC +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFPCDHC*HSCAPY
Trigger: GTATGGTGCACATGAATGGCAGCAGTGGTCACATGG...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATCCATGTGACCACTGCTaGCATTCATGTGCACCATAC +
Preference number: 4 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDPCDHC*HSCAPY
Trigger: GTATGGTGCACATGAATGGCAGCAGTGGTCACATGG...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGCCATGTGACCACTGCTaGCATTCATGTGCACCATAC +
Preference number: 4 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRPCDHC*HSCAPY
Trigger: GTATGGTGCACATGAATGGCAGCAGTGGTCACATGG...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATCTGTTTACTTTCAGCTaGACCCACCTCTGGATCAAA +
Preference number: 4 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHLFTFS*THLWIK
Trigger: TTTGATCCAGAGGTGGGTGCAGCTGAAAGTAAACAG...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp TTAGCATGTGAAAAGTTTGCTACTGCTGCGATTAAATACTGTCATCTCATTTCCGCATTAAGAAAACCCTaGTGGGAGCTCACCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LACEKFATAAIKYCHLISALRKP*WELTWG
Trigger: GCCCCAGGTGAGCTCCCAGCAGGGTTTTCTTAATGC...GGAAATGAGATGACAGTATTTAATCGCAGCAGTAGCAAACTTTTCACATGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371998.8
CDS-3UTR CCA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGGTTTTCGTGAATCACTaGCCAGTGGATCCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRVFVNH*PVDPSF
Trigger: AAAACTTGGATCCACTGGCCAGTGATTCACGAAAAC...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp CAACTCAACACCATTAGTAAAGGACAATTCAGAATCACCAATTCCACTGGACAACTCCATCATAGCTCGTaGCTGAGACAGGGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: QLNTISKGQFRITNSTGQLHHSS*LRQGKA
Trigger: TGCTTTGCCCTGTCTCAGCCACGAGCTATGATGGAG...TTGTCCAGTGGAATTGGTGATTCTGAATTGTCCTTTACTAATGGTGTTGAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACCAAAGCCAGGCCTCATaGAGGATCTCAGTGAATTTG +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHQSQAS*RISVNL
Trigger: CAAATTCACTGAGATCCTCCATGAGGCCTGGCTTTG...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTACAAAGCCAGGCCTCATaGAGGATCTCAGTGAATTTG +
Preference number: 4 (lower is better)
Translates to: GWDYALCPILQLEKPDILQSQAS*RISVNL
Trigger: CAAATTCACTGAGATCCTCCATGAGGCCTGGCTTTG...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATCGAGAATCGATATACTaGGGTTTCTGCATGGCCATT +
Preference number: 4 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHRESIY*GFCMAI
Trigger: AATGGCCATGCAGAAACCCCAGTATATCGATTCTCG...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACGGCATCTGTAAGCCTTaGTTTGGCGACATACTCATG +
Preference number: 4 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYGICKP*FGDILM
Trigger: CATGAGTATGTCGCCAAACCAAGGCTTACAGATGCC...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACCTGCTGGAAAAGCTGTaGTTCCCAGTATTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYLLEKL*FPVLPE
Trigger: TTCTGGCAATACTGGGAACCACAGCTTTTCCAGCAG...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAGAGAGTTATCCAATTTaGGGCCTGGTGATGACAGAG +
Preference number: 4 (lower is better)
Translates to: GWDYALCPILQLEKPDILESYPI*GLVMTE
Trigger: CTCTGTCATCACCAGGCCCCAAATTGGATAACTCTC...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GGTCAACACAGAACTACTACACCTGAAGGCTGGGACTATGCTCTTTGTCCAATAAAGAAGTTATACTGCTaGTGTCTTTCCCAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: GQHRTTTPEGWDYALCPIKKLYC*CLSQWL
Trigger: AAGCCACTGGGAAAGACACCAGCAGTATAACTTCTT...TATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGAAGAAGTTATACTGCTaGTGTCTTTCCCAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRKKLYC*CLSQWL
Trigger: AAGCCACTGGGAAAGACACCAGCAGTATAACTTCTT...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAATCCACTCCTTCCACTTaGGGCTGTAGTTCTTTAGAG +
Preference number: 4 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKSTPST*GCSSLE
Trigger: CTCTAAAGAACTACAGCCCCAAGTGGAAGGAGTGGA...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACGATTCCCACCCAACATaGGTTGCTTTGGTAACATGG +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHDSHPT*VALVTW
Trigger: CCATGTTACCAAAGCAACCCATGTTGGGTGGGAATC...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAATACTGGTCTCGCACCTaGTATGCTATTAGACCGAAG +
Preference number: 4 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKYWSRT*YAIRPK
Trigger: CTTCGGTCTAATAGCATACCAGGTGCGAGACCAGTA...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTATACTGGTCTCGCACCTaGTATGCTATTAGACCGAAG +
Preference number: 4 (lower is better)
Translates to: GWDYALCPILQLEKPDILYWSRT*YAIRPK
Trigger: CTTCGGTCTAATAGCATACCAGGTGCGAGACCAGTA...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTGCTGTTGCAATACTaGTCTCGCACCTGGTATGCT +
Preference number: 4 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVLLLQY*SRTWYA
Trigger: AGCATACCAGGTGCGAGACCAGTATTGCAACAGCAG...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAAGGAAAGCATCCTGTTTaGGCTCTAATGCCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQEGKHPV*ALMPVP
Trigger: AGGGACAGGCATTAGAGCCCAAACAGGATGCTTTCC...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATCGTGGGTGCATTCCTTaGAGAGGAAAATTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDRGCIP*RGKLPC
Trigger: GCAAGGCAATTTTCCTCTCCAAGGAATGCACCCACG...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTTTAAGAAAACCCTGCTaGGGCTGCATCATAGGCCTC +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFLRKPC*GCIIGL
Trigger: GAGGCCTATGATGCAGCCCCAGCAGGGTTTTCTTAA...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371997.3
ENST00000372004.7
CDS-3UTR CCA 90 bp GCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAATCTCTCTTGATTTGCGGAGGAGCTTGTaGCATTGTGGGTCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: ALCPILQLEKPDILISLDLRRSL*HCGSCQ
Trigger: TTGGCAGGACCCACAATGCCACAAGCTCCTCCGCAA...ATCAAGAGAGATTAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATACCAAAGGCTGGATCTaGTTGTTGTCCCATTCCATA +
Preference number: 4 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHTKGWI*LLSHSI
Trigger: TATGGAATGGGACAACAACCAGATCCAGCCTTTGGT...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGTGCCAGACATGGGCATaGGGTTCATGTTCATCTGTC +
Preference number: 4 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRCQTWA*GSCSSV
Trigger: GACAGATGAACATGAACCCCATGCCCATGTCTGGCA...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTCCTTAAGAGGTCCTaGTGCAGAGATGTCAGCAGT +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHFLKRS*CRDVSS
Trigger: ACTGCTGACATCTCTGCACCAGGACCTCTTAAGGAA...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTCAATTTGCGTTTTCGTaGATCACTGGCCAGTGGATC +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFQFAFS*ITGQWI
Trigger: GATCCACTGGCCAGTGATTCACGAAAACGCAAATTG...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCCATTCTGTTCTCTCTaGAGGAAGTGGGTTGAGACA +
Preference number: 4 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVPFCSL*RKWVET
Trigger: TGTCTCAACCCACTTCCTTCAGAGAGAACAGAATGG...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GAAGAGAGAAAACACCCTGCTCGTTTATTAACAGTGTGCCTTGGAGTTGAAAACTACGAGGAGAAATCATaGTATTCTGCTGGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: EERKHPARLLTVCLGVENYEEKS*YSAGLG
Trigger: CCCCAAACCAGCAGAATATCATGATTTCTCCTCGTA...GTTTTCAACTCCAAGGCACACTGTTAATAAACGAGCAGGGTGTTTTCTCTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGAGGAGAAAACTGATGTaGGGCTATCTTTGGACTCCC +
Preference number: 4 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRRRKLM*GYLWTP
Trigger: GGGAGTCCAAAGATAGCCTCACATCAGTTTTCTCCT...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAAGTCTTTCTCTTGACTTaGGCTAGGAATGGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQEVFLLT*ARNGGA
Trigger: AGCTCCACCATTCCTAGCTCAAGTCAAGAGAAAGAC...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACTGCTTAGTCCCCAGATaGCTACCATTTGAGGATATG +
Preference number: 4 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYCLVPR*LPFEDM
Trigger: CATATCCTCAAATGGTAGTCATCTGGGGACTAAGCA...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAAAGACTGCACAGACTGTaGACTTTTCAAACCCAGAGA +
Preference number: 4 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKRLHRL*TFQTQR
Trigger: TCTCTGGGTTTGAAAAGTTCACAGTCTGTGCAGTCT...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACAGACTGCACAGACTGTaGACTTTTCAAACCCAGAGA +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHRLHRL*TFQTQR
Trigger: TCTCTGGGTTTGAAAAGTTCACAGTCTGTGCAGTCT...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GAAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATCTTTCTTAGATTCACCAGGCCTCATTTaGAGCATCTGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: EKHRPLQWKFSDLQSFLDSPGLI*SICCCC
Trigger: ACAGCAGCAGCAGATGCTTCAAATGAGGCCTGGTGA...ATCTAAGAAAGATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACTCTAATGCCTGTCCCTaGTTGACAAGTTCAGGAATG +
Preference number: 4 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYSNACP*LTSSGM
Trigger: CATTCCTGAACTTGTCAATCAGGGACAGGCATTAGA...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp TTAGCATGTGAAAAGTTTGCTACTGCTGCGATTAAATACTGTCATCTCATTTCCGGAGGGACCCATTCTTaGCGACATCATTGCATTGGG +
Preference number: 4 (lower is better)
Translates to: LACEKFATAAIKYCHLISGGTHS*RHHCIG
Trigger: CCCAATGCAATGATGTCGTCAAGAATGGGTCCCTCC...GGAAATGAGATGACAGTATTTAATCGCAGCAGTAGCAAACTTTTCACATGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAATCTCTCTTGATCCTGGCCAAATTTCCTaGTGGCCAGCCCTTCATTTC +
Preference number: 4 (lower is better)
Translates to: ALCPILQLEKPDILISLDPGQIS*WPALHF
Trigger: GAAATGAAGGGCTGGCCATCAGGAAATTTGGCCAGG...ATCAAGAGAGATTAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTTGTCAGCAGTATTTCTaGTCAGGACCCATAGGCATG +
Preference number: 4 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVCQQYF*SGPIGM
Trigger: CATGCCTATGGGTCCTGATCAGAAATACTGCTGACA...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACAACACTGCGAGATTCTaGTTCAGAATGCAGTACCTG +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHNTARF*FRMQYL
Trigger: CAGGTACTGCATTCTGAATCAGAATCTCGCAGTGTT...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACGTTAGACTGTGGCTCTaGATCACAGTAAAACTGGCT +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHVRLWL*ITVKLA
Trigger: AGCCAGTTTTACTGTGATTCAGAGCCACAGTCTAAC...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAATCCCTTCCTCCCAACTaGCTAAAACAGGTGTCAAAG +
Preference number: 4 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQESLPPN*LKQVSK
Trigger: CTTTGACACCTGTTTTAGTCAGTTGGGAGGAAGGGA...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTTGGCCCACCCATACTTaGGCCATAATTTTCCTGACT +
Preference number: 4 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVWPTHT*AIIFLT
Trigger: AGTCAGGAAAATTATGGCTCAAGTATGGGTGGGCCA...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGTTATCAATAACTCCCTaGCCTGTAGAAGATACATCG +
Preference number: 4 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRLSITP*PVEDTS
Trigger: CGATGTATCTTCTACAGGGCAGGGAGTTATTGATAA...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGTTATCAATAACTCCCTaGCCTGTAGAAGATACATCG +
Preference number: 4 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRLSITP*PVEDTS
Trigger: CGATGTATCTTCTACAGGGCAGGGAGTTATTGATAA...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GAAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATCTTTCTTAGATAAGATGGTGATTGCATaGCTGGCCCAGGGGTCAATG +
Preference number: 4 (lower is better)
Translates to: EKHRPLQWKFSDLQSFLDKMVIA*LAQGSM
Trigger: CATTGACCCCTGGGCCAGGCATGCAATCACCATCTT...ATCTAAGAAAGATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp TTAGCATGTGAAAAGTTTGCTACTGCTGCGATTAAATACTGTCATCTCATTTCCGATGCCATGGGAGAGTaGACACCTGCAACAGGAGAA +
Preference number: 4 (lower is better)
Translates to: LACEKFATAAIKYCHLISDAMGE*TPATGE
Trigger: TTCTCCTGTTGCAGGTGTGCACTCTCCCATGGCATC...GGAAATGAGATGACAGTATTTAATCGCAGCAGTAGCAAACTTTTCACATGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGTGTAACAGTGACCCATaGATATTGGATGTAGAGGAT +
Preference number: 4 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRCNSDP*ILDVED
Trigger: ATCCTCTACATCCAATATGCATGGGTCACTGTTACA...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GGTCAACACAGAACTACTACACCTGAAGGCTGGGACTATGCTCTTTGTCCAATATGTAACAGTGACCCATaGATATTGGATGTAGAGGAT +
Preference number: 4 (lower is better)
Translates to: GQHRTTTPEGWDYALCPICNSDP*ILDVED
Trigger: ATCCTCTACATCCAATATGCATGGGTCACTGTTACA...TATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGTGTAACAGTGACCCATaGATATTGGATGTAGAGGAT +
Preference number: 4 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRCNSDP*ILDVED
Trigger: ATCCTCTACATCCAATATGCATGGGTCACTGTTACA...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAACACAAGAAGTTATACTaGTGGTGTCTTTCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKHKKLY*WCLSQW
Trigger: CCACTGGGAAAGACACCAGCAGTATAACTTCTTGTG...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGTTCTTAGGACTTAGCTaGTCCTGCTTGACAACATTT +
Preference number: 4 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRFLGLS*SCLTTF
Trigger: AAATGTTGTCAAGCAGGAGCAGCTAAGTCCTAAGAA...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACGGAGGACGAATAGACTaGACAGACTGTGAACTTTTC +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHGGRID*TDCELF
Trigger: GAAAAGTTCACAGTCTGTGCAGTCTATTCGTCCTCC...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGCCACCCAACATGGGTTaGTTTGGTAACATGGGGAAA +
Preference number: 4 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRPPNMG*FGNMGK
Trigger: TTTCCCCATGTTACCAAAGCAACCCATGTTGGGTGG...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAACCACCCAACATGGGTTaGTTTGGTAACATGGGGAAA +
Preference number: 4 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQEPPNMG*FGNMGK
Trigger: TTTCCCCATGTTACCAAAGCAACCCATGTTGGGTGG...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTTTGGTTAGATGCTGCTaGTTGGCCATAGGGATTAGC +
Preference number: 4 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVLVRCC*LAIGIS
Trigger: GCTAATCCCTATGGCCAAGCAGCAGCATCTAACCAA...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTTTGGTTAGATGCTGCTaGTTGGCCATAGGGATTAGC +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFLVRCC*LAIGIS
Trigger: GCTAATCCCTATGGCCAAGCAGCAGCATCTAACCAA...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGCAGTTGGTTAGATGCTaGTGCTTGGCCATAGGGATT +
Preference number: 4 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRQLVRC*CLAIGI
Trigger: AATCCCTATGGCCAAGCAGCAGCATCTAACCAACTG...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTACTGATCCATCATTACTaGTGCTTCTTGGCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: GWDYALCPILQLEKPDILLIHHY*CFLALE
Trigger: TTCCAAGGCCAAGAAGCAGCAGTAATGATGGATCAG...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATCTTGGAGAGGAAAATTaGCTTGCTGGTTCATCTGAT +
Preference number: 4 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHLGEEN*LAGSSD
Trigger: ATCAGATGAACCAGCAAGGCAATTTTCCTCTCCAAG...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTATGTTGGCTCGTGGGTaGATTCCTTGGAGAGGAAAA +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFMLARG*IPWRGK
Trigger: TTTTCCTCTCCAAGGAATGCACCCACGAGCCAACAT...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp CAACTCAACACCATTAGTAAAGGACAATTCAGAATCACCAATTCCACTGGACAAGCATTAAGAAAACCCTaGTGGGGCTGCATCATAGGC +
Preference number: 4 (lower is better)
Translates to: QLNTISKGQFRITNSTGQALRKP*WGCIIG
Trigger: GCCTATGATGCAGCCCCAGCAGGGTTTTCTTAATGC...TTGTCCAGTGGAATTGGTGATTCTGAATTGTCCTTTACTAATGGTGTTGAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371997.3
ENST00000372004.7
CDS-3UTR GCA 90 bp TTAGCATGTGAAAAGTTTGCTACTGCTGCGATTAAATACTGTCATCTCATTTCCTGGTGGGCAAACTGCTaGTGGGAAAAGGAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: LACEKFATAAIKYCHLISWWANC*WEKELF
Trigger: GAACAGCTCCTTTTCCCAGCAGCAGTTTGCCCACCA...GGAAATGAGATGACAGTATTTAATCGCAGCAGTAGCAAACTTTTCACATGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GAAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATCTTTCTTAGATTGGTGGGCAAACTGCTaGTGGGAAAAGGAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: EKHRPLQWKFSDLQSFLDWWANC*WEKELF
Trigger: GAACAGCTCCTTTTCCCAGCAGCAGTTTGCCCACCA...ATCTAAGAAAGATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GAAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATCTTTCTTAGATCACCATACTATACACTaGAGGATTCCCCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: EKHRPLQWKFSDLQSFLDHHTIH*RIPLVG
Trigger: GCCCACCAGGGGAATCCTGCAGTGTATAGTATGGTG...ATCTAAGAAAGATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAACTGCTGCCATTCATGTaGACCATACTATACACTGCA +
Preference number: 4 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKLLPFM*TILYTA
Trigger: TGCAGTGTATAGTATGGTGCACATGAATGGCAGCAG...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GAAGAGAGAAAACACCCTGCTCGTTTATTAACAGTGTGCCTTGGAGTTGAAAACGATTCTGATTCAGAATaGAGTACCTGGCCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: EERKHPARLLTVCLGVENDSDSE*STWPWV
Trigger: AACCCAAGGCCAGGTACTGCATTCTGAATCAGAATC...GTTTTCAACTCCAAGGCACACTGTTAATAAACGAGCAGGGTGTTTTCTCTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGGAGGGGTTTAAAAGGTaGTCAGTTAGACTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: YTALKIRSTLVVGLEIIREGFKR*SVRLWL
Trigger: GAGCCACAGTCTAACTGAGCACCTTTTAAACCCCTC...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTGAGGGGTTTAAAAGGTaGTCAGTTAGACTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFEGFKR*SVRLWL
Trigger: GAGCCACAGTCTAACTGAGCACCTTTTAAACCCCTC...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACCTGTTTACTTTCAGCTaGACCCACCTCTGGATCAAA +
Preference number: 4 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYLFTFS*THLWIK
Trigger: TTTGATCCAGAGGTGGGTGCAGCTGAAAGTAAACAG...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGGGCGCATTTCAGGACTaGCGTTTATGTCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRGAFQD*RLCLPE
Trigger: TTCTGGAAGACATAAACGCCAGTCCTGAAATGCGCC...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATGGCATCTGTAAGCCTTaGTTTGGCGACATACTCATG +
Preference number: 4 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDGICKP*FGDILM
Trigger: CATGAGTATGTCGCCAAACCAAGGCTTACAGATGCC...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAAGGCATCTGTAAGCCTTaGTTTGGCGACATACTCATG +
Preference number: 4 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQEGICKP*FGDILM
Trigger: CATGAGTATGTCGCCAAACCAAGGCTTACAGATGCC...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACATCATGATATTCTGCTaGTTTGGGGCAAGACCAGGA +
Preference number: 4 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYIMIFC*FGARPG
Trigger: TCCTGGTCTTGCCCCAAACCAGCAGAATATCATGAT...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTCTGCTGGAAAAGCTGTaGTTCCCAGTATTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFLLEKL*FPVLPE
Trigger: TTCTGGCAATACTGGGAACCACAGCTTTTCCAGCAG...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAAGAGAGTTATCCAATTTaGGGCCTGGTGATGACAGAG +
Preference number: 4 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQEESYPI*GLVMTE
Trigger: CTCTGTCATCACCAGGCCCCAAATTGGATAACTCTC...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACAGCCCAGAGGACTCTTaGAATCCTGATTGCTTACTT +
Preference number: 4 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYSPEDS*NPDCLL
Trigger: AAGTAAGCAATCAGGATTCCAAGAGTCCTCTGGGCT...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTCACTGCTCGGTTATATaGAGGACGAATAGACTGCAC +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFHCSVI*RTNRLH
Trigger: GTGCAGTCTATTCGTCCTCCATATAACCGAGCAGTG...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTGATTCCCACCCAACATaGGTTGCTTTGGTAACATGG +
Preference number: 4 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVDSHPT*VALVTW
Trigger: CCATGTTACCAAAGCAACCCATGTTGGGTGGGAATC...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAACTATCCATCATTCTTaGATTCCCACCCAACATGGG +
Preference number: 4 (lower is better)
Translates to: GWDYALCPILQLEKPDILTIHHS*IPTQHG
Trigger: CCCATGTTGGGTGGGAATCCAAGAATGATGGATAGT...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GAAGAGAGAAAACACCCTGCTCGTTTATTAACAGTGTGCCTTGGAGTTGAAAACACTATCCATCATTCTTaGATTCCCACCCAACATGGG +
Preference number: 4 (lower is better)
Translates to: EERKHPARLLTVCLGVENTIHHS*IPTQHG
Trigger: CCCATGTTGGGTGGGAATCCAAGAATGATGGATAGT...GTTTTCAACTCCAAGGCACACTGTTAATAAACGAGCAGGGTGTTTTCTCTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTTACTGGTCTCGCACCTaGTATGCTATTAGACCGAAG +
Preference number: 4 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVYWSRT*YAIRPK
Trigger: CTTCGGTCTAATAGCATACCAGGTGCGAGACCAGTA...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAATCTCTCTTGATGCTGCTTCTTGGCCTTaGAAAGCATCCTGTTTGGGC +
Preference number: 4 (lower is better)
Translates to: ALCPILQLEKPDILISLDAASWP*KASCLG
Trigger: GCCCAAACAGGATGCTTTCCAAGGCCAAGAAGCAGC...ATCAAGAGAGATTAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp TTAGCATGTGAAAAGTTTGCTACTGCTGCGATTAAATACTGTCATCTCATTTCCGCTGCTTCTTGGCCTTaGAAAGCATCCTGTTTGGGC +
Preference number: 4 (lower is better)
Translates to: LACEKFATAAIKYCHLISAASWP*KASCLG
Trigger: GCCCAAACAGGATGCTTTCCAAGGCCAAGAAGCAGC...GGAAATGAGATGACAGTATTTAATCGCAGCAGTAGCAAACTTTTCACATGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp CAACTCAACACCATTAGTAAAGGACAATTCAGAATCACCAATTCCACTGGACAACGTGGGTGCATTCCTTaGAGAGGAAAATTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: QLNTISKGQFRITNSTGQRGCIP*RGKLPC
Trigger: GCAAGGCAATTTTCCTCTCCAAGGAATGCACCCACG...TTGTCCAGTGGAATTGGTGATTCTGAATTGTCCTTTACTAATGGTGTTGAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAATCTCTCTTGATCATGATGTTGGCTCGTaGGTGCATTCCTTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: ALCPILQLEKPDILISLDHDVGS*VHSLER
Trigger: CCTCTCCAAGGAATGCACCCACGAGCCAACATCATG...ATCAAGAGAGATTAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp TTAGCATGTGAAAAGTTTGCTACTGCTGCGATTAAATACTGTCATCTCATTTCCAGTCACATTAGGAGGTaGGCTGAAGGCCTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: LACEKFATAAIKYCHLISSHIRR*AEGLGL
Trigger: CAAACCCAGGCCTTCAGCCCACCTCCTAATGTGACT...GGAAATGAGATGACAGTATTTAATCGCAGCAGTAGCAAACTTTTCACATGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAAACCAAAGGCTGGATCTaGTTGTTGTCCCATTCCATA +
Preference number: 4 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKTKGWI*LLSHSI
Trigger: TATGGAATGGGACAACAACCAGATCCAGCCTTTGGT...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTTTCCTTAAGAGGTCCTaGTGCAGAGATGTCAGCAGT +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFFLKRS*CRDVSS
Trigger: ACTGCTGACATCTCTGCACCAGGACCTCTTAAGGAA...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GGTCAACACAGAACTACTACACCTGAAGGCTGGGACTATGCTCTTTGTCCAATATCCTTTCTTCCAAGATaGATGCCTGGAACAATGATT +
Preference number: 4 (lower is better)
Translates to: GQHRTTTPEGWDYALCPISFLPR*MPGTMI
Trigger: AATCATTGTTCCAGGCATCCATCTTGGAAGAAAGGA...TATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATTCTTCCAATGTTCTCTaGCCCACCTACGTGTATTTA +
Preference number: 4 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHSSNVL*PTYVYL
Trigger: TAAATACACGTAGGTGGGCCAGAGAACATTGGAAGA...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR CAA 72 bp AATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTaGTACAGTGGTTTCCTTAAGAGGTCCTGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: NDSFPIILVQCH*YSGFLKRSWCR
Trigger: TCTGCACCAGGACCTCTTAAGGAAACCACTGTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
3UTR CAA 72 bp TCCAGTCCTGCTCAAATGACATCACTTAAAATACCCTaGATGGAGCTCAAAGCTGGTCCTTTCTTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: SSPAQMTSLKIP*MELKAGPFFQD
Trigger: ATCTTGGAAGAAAGGACCAGCTTTGAGCTCCATCAAGGGTATTTTAAGTGATGTCATTTGAGCAGGACTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAAATTTTTATTGGTCTCTaGGTCCACCATCCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKIFIGL*VHHPAS
Trigger: ACTTGCTGGATGGTGGACTCAGAGACCAATAAAAAT...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACATTTTTATTGGTCTCTaGGTCCACCATCCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHIFIGL*VHHPAS
Trigger: ACTTGCTGGATGGTGGACTCAGAGACCAATAAAAAT...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTAAACCATCCAATGCCTaGAGTAAAAGCGGTCCTAAG +
Preference number: 4 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVKPSNA*SKSGPK
Trigger: CTTAGGACCGCTTTTACTTCAGGCATTGGATGGTTT...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GGTCAACACAGAACTACTACACCTGAAGGCTGGGACTATGCTCTTTGTCCAATAATTGACAACCTTTCCTaGAAGATCATGTCTGGTAAT +
Preference number: 4 (lower is better)
Translates to: GQHRTTTPEGWDYALCPIIDNLS*KIMSGN
Trigger: ATTACCAGACATGATCTTTCAGGAAAGGTTGTCAAT...TATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GGTCAACACAGAACTACTACACCTGAAGGCTGGGACTATGCTCTTTGTCCAATACATGGAGGATCTCAGTaGATTTGTATCTATATTGAC +
Preference number: 4 (lower is better)
Translates to: GQHRTTTPEGWDYALCPIHGGSQ*ICIYID
Trigger: GTCAATATAGATACAAATTCACTGAGATCCTCCATG...TATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp CAACTCAACACCATTAGTAAAGGACAATTCAGAATCACCAATTCCACTGGACAACCATTCTGTTCTCTCTaGAGGAAGTGGGTTGAGACA +
Preference number: 4 (lower is better)
Translates to: QLNTISKGQFRITNSTGQPFCSL*RKWVET
Trigger: TGTCTCAACCCACTTCCTTCAGAGAGAACAGAATGG...TTGTCCAGTGGAATTGGTGATTCTGAATTGTCCTTTACTAATGGTGTTGAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTTACGAGGAGAAATCATaGTATTCTGCTGGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVYEEKS*YSAGLG
Trigger: CCCCAAACCAGCAGAATATCATGATTTCTCCTCGTA...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAAGGACTCTTGGAATCCTaGTTGCTTACTTTACTTGGT +
Preference number: 4 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKGLLES*LLTLLG
Trigger: ACCAAGTAAAGTAAGCAATCAGGATTCCAAGAGTCC...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATAGACTGCACAGACTGTaGACTTTTCAAACCCAGAGA +
Preference number: 4 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDRLHRL*TFQTQR
Trigger: TCTCTGGGTTTGAAAAGTTCACAGTCTGTGCAGTCT...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGCCAGTCTCCCATACTTaGGCCATAATTTTCCTGACT +
Preference number: 4 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRPVSHT*AIIFLT
Trigger: AGTCAGGAAAATTATGGCTCAAGTATGGGAGACTGG...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371997.3
CDS-3UTR TCA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATTCTTCCCATGGAGTTTaGATTCATAGGTTCCATTCT +
Preference number: 4 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHSSHGV*IHRFHS
Trigger: AGAATGGAACCTATGAATTCAAACTCCATGGGAAGA...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAATCTCTCTTGATATGCCTGTCCCTGATTaGCAAGTTCAGGAATGCCCA +
Preference number: 4 (lower is better)
Translates to: ALCPILQLEKPDILISLDMPVPD*QVQECP
Trigger: TGGGCATTCCTGAACTTGTCAATCAGGGACAGGCAT...ATCAAGAGAGATTAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGAGAGTTAAAAGATGGTaGTTGTCCCTGAAGATGAAA +
Preference number: 4 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRRVKRW*LSLKMK
Trigger: TTTCATCTTCAGGGACAATCACCATCTTTTAACTCT...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGAGAGTTAAAAGATGGTaGTTGTCCCTGAAGATGAAA +
Preference number: 4 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRRVKRW*LSLKMK
Trigger: TTTCATCTTCAGGGACAATCACCATCTTTTAACTCT...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GGTCAACACAGAACTACTACACCTGAAGGCTGGGACTATGCTCTTTGTCCAATAAGAGTTAAAAGATGGTaGTTGTCCCTGAAGATGAAA +
Preference number: 4 (lower is better)
Translates to: GQHRTTTPEGWDYALCPIRVKRW*LSLKMK
Trigger: TTTCATCTTCAGGGACAATCACCATCTTTTAACTCT...TATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp TTAGCATGTGAAAAGTTTGCTACTGCTGCGATTAAATACTGTCATCTCATTTCCCCAGCCCTTCATTTCTaGGGACTGATAGATGGATGC +
Preference number: 4 (lower is better)
Translates to: LACEKFATAAIKYCHLISPALHF*GLIDGC
Trigger: GCATCCATCTATCAGTCCTCAGAAATGAAGGGCTGG...GGAAATGAGATGACAGTATTTAATCGCAGCAGTAGCAAACTTTTCACATGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTGGATGCCTGGAACAATaGTTCCTTCCCAATAATCCT +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFGCLEQ*FLPNNP
Trigger: AGGATTATTGGGAAGGAATCATTGTTCCAGGCATCC...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACCCAGTCCTGCTCAAATaGCATCACTTAAAATACCCT +
Preference number: 4 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYPVLLK*HHLKYP
Trigger: AGGGTATTTTAAGTGATGTCATTTGAGCAGGACTGG...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GAAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATCTTTCTTAGATCCATTTGGACATCCATaGCAGTTCCTGGAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: EKHRPLQWKFSDLQSFLDPFGHP*QFLEVK
Trigger: CTTCACCTCCAGGAACTGTCATGGATGTCCAAATGG...ATCTAAGAAAGATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGAACACTGCGAGATTCTaGTTCAGAATGCAGTACCTG +
Preference number: 4 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRNTARF*FRMQYL
Trigger: CAGGTACTGCATTCTGAATCAGAATCTCGCAGTGTT...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGCACACACACAGCCCATaGATTGCTATTATTTCGGAC +
Preference number: 4 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRHTHSP*IAIISD
Trigger: GTCCGAAATAATAGCAATTCATGGGCTGTGTGTGTG...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATGCTAGCAGAGACCTCTaGAATTCACAGACATTCAGA +
Preference number: 4 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDASRDL*NSQTFR
Trigger: TCTGAATGTCTGTGAATTTCAGAGGTCTCTGCTAGC...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTGCTAGCAGAGACCTCTaGAATTCACAGACATTCAGA +
Preference number: 4 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVASRDL*NSQTFR
Trigger: TCTGAATGTCTGTGAATTTCAGAGGTCTCTGCTAGC...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATGGAGAGTATACTATCTaGAAAGCACAGGCCACTACA +
Preference number: 4 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDGEYTI*KAQATT
Trigger: TGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCC...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAACAGATACAATTGAGCTaGAAAAGAGACAGACTGACC +
Preference number: 4 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKQIQLS*KRDRLT
Trigger: GGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTG...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACAGGGTCAGATACAATTaGGCTGAAAAAGAGACAGAC +
Preference number: 4 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYRVRYN*AEKETD
Trigger: GTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCT...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGTTAACCAGGTCCTCTTaGTTATATTGCAGGTATTGT +
Preference number: 4 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRLTRSS*LYCRYC
Trigger: ACAATACCTGCAATATAAGCAAGAGGACCTGGTTAA...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGTGTAGTAATGCGGCGTaGCACACAGATCATACAAGA +
Preference number: 4 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRCSNAA*HTDHTR
Trigger: TCTTGTATGATCTGTGTGGCACGCCGCATTACTACA...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACGAAATCATGATATTCTaGTGGTTTGGGGCAAGACCA +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHEIMIF*WFGARP
Trigger: TGGTCTTGCCCCAAACCAGCAGAATATCATGATTTC...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GAAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATCTTTCTTAGATTGTGGTTCCCAGTATTaGCAGAAGATGCCATGGGAG +
Preference number: 4 (lower is better)
Translates to: EKHRPLQWKFSDLQSFLDCGSQY*QKMPWE
Trigger: CTCCCATGGCATCTTCTGGCAATACTGGGAACCACA...ATCTAAGAAAGATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACGGTGAATTCCCATTCTaGAGCAACTTGTGCAAAATC +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHGEFPF*SNLCKI
Trigger: GATTTTGCACAAGTTGCTGCAGAATGGGAATTCACC...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAGGTGAATTCCCATTCTaGAGCAACTTGTGCAAAATC +
Preference number: 4 (lower is better)
Translates to: GWDYALCPILQLEKPDILGEFPF*SNLCKI
Trigger: GATTTTGCACAAGTTGCTGCAGAATGGGAATTCACC...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAACACAAGAAGTTATACTaGTGGTGTCTTTCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQEHKKLY*WCLSQW
Trigger: CCACTGGGAAAGACACCAGCAGTATAACTTCTTGTG...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAAGGAGGACGAATAGACTaGACAGACTGTGAACTTTTC +
Preference number: 4 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQEGGRID*TDCELF
Trigger: GAAAAGTTCACAGTCTGTGCAGTCTATTCGTCCTCC...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp TTAGCATGTGAAAAGTTTGCTACTGCTGCGATTAAATACTGTCATCTCATTTCCGCTATCCAGAGACACTaGTCGGTTATATGGAGGACG +
Preference number: 4 (lower is better)
Translates to: LACEKFATAAIKYCHLISAIQRH*SVIWRT
Trigger: CGTCCTCCATATAACCGAGCAGTGTCTCTGGATAGC...GGAAATGAGATGACAGTATTTAATCGCAGCAGTAGCAAACTTTTCACATGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAATCTCTCTTGATATCTGCTGCTGCTGTTaGAATACTGGTCTCGCACCT +
Preference number: 4 (lower is better)
Translates to: ALCPILQLEKPDILISLDICCCC*NTGLAP
Trigger: AGGTGCGAGACCAGTATTGCAACAGCAGCAGCAGAT...ATCAAGAGAGATTAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGCTGATCCATCATTACTaGTGCTTCTTGGCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRLIHHY*CFLALE
Trigger: TTCCAAGGCCAAGAAGCAGCAGTAATGATGGATCAG...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTACTTGGAGAGGAAAATTaGCTTGCTGGTTCATCTGAT +
Preference number: 4 (lower is better)
Translates to: GWDYALCPILQLEKPDILLGEEN*LAGSSD
Trigger: ATCAGATGAACCAGCAAGGCAATTTTCCTCTCCAAG...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GAAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATCTTTCTTAGATGCATTAAGAAAACCCTaGTGGGGCTGCATCATAGGC +
Preference number: 4 (lower is better)
Translates to: EKHRPLQWKFSDLQSFLDALRKP*WGCIIG
Trigger: GCCTATGATGCAGCCCCAGCAGGGTTTTCTTAATGC...ATCTAAGAAAGATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371997.3
ENST00000372004.7
CDS-3UTR GCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTCTGCTGCCATTCATGTaGACCATACTATACACTGCA +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFLLPFM*TILYTA
Trigger: TGCAGTGTATAGTATGGTGCACATGAATGGCAGCAG...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAACTTAAGAGGTCCTGGTaGAGAGATGTCAGCAGTATT +
Preference number: 4 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQELKRSW*RDVSSI
Trigger: AATACTGCTGACATCTCTGCACCAGGACCTCTTAAG...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTCTTAAGAGGTCCTGGTaGAGAGATGTCAGCAGTATT +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFLKRSW*RDVSSI
Trigger: AATACTGCTGACATCTCTGCACCAGGACCTCTTAAG...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GAAGAGAGAAAACACCCTGCTCGTTTATTAACAGTGTGCCTTGGAGTTGAAAACGGTAAGACCTTGTCCTaGAGTATCACATGGCAATTT +
Preference number: 4 (lower is better)
Translates to: EERKHPARLLTVCLGVENGKTLS*SITWQF
Trigger: AAATTGCCATGTGATACTCCAGGACAAGGTCTTACC...GTTTTCAACTCCAAGGCACACTGTTAATAAACGAGCAGGGTGTTTTCTCTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTATTGTTTCATATCTCTaGCGCATTTCAGGACTGGCG +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFIVSYL*RISGLA
Trigger: CGCCAGTCCTGAAATGCGCCAGAGATATGAAACAAT...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCGAGAATCGATATACTaGGGTTTCTGCATGGCCATT +
Preference number: 4 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVRESIY*GFCMAI
Trigger: AATGGCCATGCAGAAACCCCAGTATATCGATTCTCG...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTATCATGATATTCTGCTaGTTTGGGGCAAGACCAGGA +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFIMIFC*FGARPG
Trigger: TCCTGGTCTTGCCCCAAACCAGCAGAATATCATGAT...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATAGCCCAGAGGACTCTTaGAATCCTGATTGCTTACTT +
Preference number: 4 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDSPEDS*NPDCLL
Trigger: AAGTAAGCAATCAGGATTCCAAGAGTCCTCTGGGCT...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTAGCCCAGAGGACTCTTaGAATCCTGATTGCTTACTT +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFSPEDS*NPDCLL
Trigger: AAGTAAGCAATCAGGATTCCAAGAGTCCTCTGGGCT...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTAGAAGAGTGTGCAGCTaGTCCAATAATGCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVRRVCS*SNNALS
Trigger: CGAAAGAGCATTATTGGACCAGCTGCACACTCTTCT...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAAAGAAGAGTGTGCAGCTaGTCCAATAATGCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQERRVCS*SNNALS
Trigger: CGAAAGAGCATTATTGGACCAGCTGCACACTCTTCT...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATATAATTTGGTTGATATaGAAACTGTTGCGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHIIWLI*KLLRRS
Trigger: GCTCCTCCGCAACAGTTTCCATATCAACCAAATTAT...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAATCTCTCTTGATCACTCGACCAAAGGCTaGATCTGGTTGTTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: ALCPILQLEKPDILISLDHSTKG*IWLLSH
Trigger: ATGGGACAACAACCAGATCCAGCCTTTGGTCGAGTG...ATCAAGAGAGATTAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAATCTCTCTTGATTGCATCATGGGATTCTaGGAGGGACCCATTCTTGAC +
Preference number: 4 (lower is better)
Translates to: ALCPILQLEKPDILISLDCIMGF*EGPILD
Trigger: GTCAAGAATGGGTCCCTCCCAGAATCCCATGATGCA...ATCAAGAGAGATTAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp TTAGCATGTGAAAAGTTTGCTACTGCTGCGATTAAATACTGTCATCTCATTTCCTGCCAGACATGGGCATaGGGTTCATGTTCATCTGTC +
Preference number: 4 (lower is better)
Translates to: LACEKFATAAIKYCHLISCQTWA*GSCSSV
Trigger: GACAGATGAACATGAACCCCATGCCCATGTCTGGCA...GGAAATGAGATGACAGTATTTAATCGCAGCAGTAGCAAACTTTTCACATGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATTCCTTTCTTCCAAGATaGATGCCTGGAACAATGATT +
Preference number: 4 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHSFLPR*MPGTMI
Trigger: AATCATTGTTCCAGGCATCCATCTTGGAAGAAAGGA...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAATCTTCCAATGTTCTCTaGCCCACCTACGTGTATTTA +
Preference number: 4 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKSSNVL*PTYVYL
Trigger: TAAATACACGTAGGTGGGCCAGAGAACATTGGAAGA...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACAATCACCAATTCCACTaGACAAAGGGTCAACACAGA +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHNHQFH*TKGQHR
Trigger: TCTGTGTTGACCCTTTGTCCAGTGGAATTGGTGATT...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACCTAATCCACTCATCTTaGATATACATCAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHLIHSS*IYISNW
Trigger: CCAGTTGCTGATGTATATTCAAGATGAGTGGATTAG...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATGATACATCGGCTTTTTaGACATCATCATCATTGGAA +
Preference number: 4 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHDTSAF*TSSSLE
Trigger: TTCCAATGATGATGATGTTCAAAAAGCCGATGTATC...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GAAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATCTTTCTTAGATAGGAGAAAACTGATGTaGGGCTATCTTTGGACTCCC +
Preference number: 4 (lower is better)
Translates to: EKHRPLQWKFSDLQSFLDRRKLM*GYLWTP
Trigger: GGGAGTCCAAAGATAGCCTCACATCAGTTTTCTCCT...ATCTAAGAAAGATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTGGACTCTTGGAATCCTaGTTGCTTACTTTACTTGGT +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFGLLES*LLTLLG
Trigger: ACCAAGTAAAGTAAGCAATCAGGATTCCAAGAGTCC...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAATCTCTGCTATTTGACTaGCACATTGAACTCTCCACT +
Preference number: 4 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQESLLFD*HIELST
Trigger: AGTGGAGAGTTCAATGTGTCAGTCAAATAGCAGAGA...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAATCTCTCTTGATGTCTTTCTCTTGACTTaGGCTAGGAATGGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: ALCPILQLEKPDILISLDVFLLT*ARNGGA
Trigger: AGCTCCACCATTCCTAGCTCAAGTCAAGAGAAAGAC...ATCAAGAGAGATTAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACTCTTCCCATGGAGTTTaGATTCATAGGTTCCATTCT +
Preference number: 4 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYSSHGV*IHRFHS
Trigger: AGAATGGAACCTATGAATTCAAACTCCATGGGAAGA...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTATCTTCCCATGGAGTTTaGATTCATAGGTTCCATTCT +
Preference number: 4 (lower is better)
Translates to: GWDYALCPILQLEKPDILSSHGV*IHRFHS
Trigger: AGAATGGAACCTATGAATTCAAACTCCATGGGAAGA...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp CAACTCAACACCATTAGTAAAGGACAATTCAGAATCACCAATTCCACTGGACAAAACACTGCGAGATTCTaGTTCAGAATGCAGTACCTG +
Preference number: 4 (lower is better)
Translates to: QLNTISKGQFRITNSTGQNTARF*FRMQYL
Trigger: CAGGTACTGCATTCTGAATCAGAATCTCGCAGTGTT...TTGTCCAGTGGAATTGGTGATTCTGAATTGTCCTTTACTAATGGTGTTGAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp CAACTCAACACCATTAGTAAAGGACAATTCAGAATCACCAATTCCACTGGACAACACACACACAGCCCATaGATTGCTATTATTTCGGAC +
Preference number: 4 (lower is better)
Translates to: QLNTISKGQFRITNSTGQHTHSP*IAIISD
Trigger: GTCCGAAATAATAGCAATTCATGGGCTGTGTGTGTG...TTGTCCAGTGGAATTGGTGATTCTGAATTGTCCTTTACTAATGGTGTTGAGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAACAGATACAATTGAGCTaGAAAAGAGACAGACTGACC +
Preference number: 4 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQEQIQLS*KRDRLT
Trigger: GGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTG...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTAGGGTCAGATACAATTaGGCTGAAAAAGAGACAGAC +
Preference number: 4 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVRVRYN*AEKETD
Trigger: GTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCT...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAATATCACATGGCAATTTaGGTTTTCGTGAATCACTGG +
Preference number: 4 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKYHMAI*VFVNHW
Trigger: CCAGTGATTCACGAAAACGCAAATTGCCATGTGATA...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACTTATCAATAACTCCCTaGCCTGTAGAAGATACATCG +
Preference number: 4 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYLSITP*PVEDTS
Trigger: CGATGTATCTTCTACAGGGCAGGGAGTTATTGATAA...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGTCCTCTTGCTTATATTaGAGGTATTGTGTGACATTT +
Preference number: 4 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRSSCLY*RYCVTF
Trigger: AAATGTCACACAATACCTGCAATATAAGCAAGAGGA...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATTTAACCAGGTCCTCTTaGTTATATTGCAGGTATTGT +
Preference number: 4 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHLTRSS*LYCRYC
Trigger: ACAATACCTGCAATATAAGCAAGAGGACCTGGTTAA...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAACAGATCATACAAGATTaGAAATCTTCCCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQEQIIQD*KSSPSS
Trigger: GGAGGAAGGGGAAGATTTGCAATCTTGTATGATCTG...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGCAGATCATACAAGATTaGAAATCTTCCCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRQIIQD*KSSPSS
Trigger: GGAGGAAGGGGAAGATTTGCAATCTTGTATGATCTG...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTATTCTGGGACCATGACTaGCCATCATTTAGACTAAAA +
Preference number: 4 (lower is better)
Translates to: GWDYALCPILQLEKPDILFWDHD*PSFRLK
Trigger: TTTTAGTCTAAATGATGGGCAGTCATGGTCCCAGAA...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAAGAAATCATGATATTCTaGTGGTTTGGGGCAAGACCA +
Preference number: 4 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQEEIMIF*WFGARP
Trigger: TGGTCTTGCCCCAAACCAGCAGAATATCATGATTTC...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATTTGTGCAAAATCCGGTaGTTCTCTTGTAACAGTGAC +
Preference number: 4 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDLCKIR*FSCNSD
Trigger: GTCACTGTTACAAGAGAAGCACCGGATTTTGCACAA...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAATTGTGCAAAATCCGGTaGTTCTCTTGTAACAGTGAC +
Preference number: 4 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQELCKIR*FSCNSD
Trigger: GTCACTGTTACAAGAGAAGCACCGGATTTTGCACAA...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp CAACTCAACACCATTAGTAAAGGACAATTCAGAATCACCAATTCCACTGGACAATTCTGCAGCAACTTGTaGAAAATCCGGTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: QLNTISKGQFRITNSTGQFCSNL*KIRCFS
Trigger: AGAGAAGCACCGGATTTTGCACAAGTTGCTGCAGAA...TTGTCCAGTGGAATTGGTGATTCTGAATTGTCCTTTACTAATGGTGTTGAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAAGGTGAATTCCCATTCTaGAGCAACTTGTGCAAAATC +
Preference number: 4 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQEGEFPF*SNLCKI
Trigger: GATTTTGCACAAGTTGCTGCAGAATGGGAATTCACC...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAATCTCTCTTGATTTGGTTAGATGCTGCTaGTTGGCCATAGGGATTAGC +
Preference number: 4 (lower is better)
Translates to: ALCPILQLEKPDILISLDLVRCC*LAIGIS
Trigger: GCTAATCCCTATGGCCAAGCAGCAGCATCTAACCAA...ATCAAGAGAGATTAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAATCTCTCTTGATCAGTTGGTTAGATGCTaGTGCTTGGCCATAGGGATT +
Preference number: 4 (lower is better)
Translates to: ALCPILQLEKPDILISLDQLVRC*CLAIGI
Trigger: AATCCCTATGGCCAAGCAGCAGCATCTAACCAACTG...ATCAAGAGAGATTAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAACTTGGAGAGGAAAATTaGCTTGCTGGTTCATCTGAT +
Preference number: 4 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQELGEEN*LAGSSD
Trigger: ATCAGATGAACCAGCAAGGCAATTTTCCTCTCCAAG...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAATCTCTCTTGATATGTTGGCTCGTGGGTaGATTCCTTGGAGAGGAAAA +
Preference number: 4 (lower is better)
Translates to: ALCPILQLEKPDILISLDMLARG*IPWRGK
Trigger: TTTTCCTCTCCAAGGAATGCACCCACGAGCCAACAT...ATCAAGAGAGATTAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACACACAGCCCATGAATTaGTATTATTTCGGACTGCTT +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHTQPMN*YYFGLL
Trigger: AAGCAGTCCGAAATAATAGCAATTCATGGGCTGTGT...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACAGAGAGAAAACACCCTaGTCGTTTATTAACAGTGTG +
Preference number: 4 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYREKTP*SFINSV
Trigger: CACACTGTTAATAAACGAGCAGGGTGTTTTCTCTCT...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAAGAGAGAAAACACCCTaGTCGTTTATTAACAGTGTG +
Preference number: 4 (lower is better)
Translates to: GWDYALCPILQLEKPDILREKTP*SFINSV
Trigger: CACACTGTTAATAAACGAGCAGGGTGTTTTCTCTCT...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GAAGAGAGAAAACACCCTGCTCGTTTATTAACAGTGTGCCTTGGAGTTGAAAACATATACATCAGCAACTaGCTAACCAGTCAAAGGATG +
Preference number: 4 (lower is better)
Translates to: EERKHPARLLTVCLGVENIYISN*LTSQRM
Trigger: CATCCTTTGACTGGTTAGCCAGTTGCTGATGTATAT...GTTTTCAACTCCAAGGCACACTGTTAATAAACGAGCAGGGTGTTTTCTCTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTGTTTTCGTGAATCACTaGCCAGTGGATCCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFVFVNH*PVDPSF
Trigger: AAAACTTGGATCCACTGGCCAGTGATTCACGAAAAC...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGGGTAAGACCTTGTCCTaGAGTATCACATGGCAATTT +
Preference number: 4 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRGKTLS*SITWQF
Trigger: AAATTGCCATGTGATACTCCAGGACAAGGTCTTACC...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATGGTAAGACCTTGTCCTaGAGTATCACATGGCAATTT +
Preference number: 4 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDGKTLS*SITWQF
Trigger: AAATTGCCATGTGATACTCCAGGACAAGGTCTTACC...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GGTCAACACAGAACTACTACACCTGAAGGCTGGGACTATGCTCTTTGTCCAATATTCCAGAATATCATGTaGTGTTTTCATCAACATACG +
Preference number: 4 (lower is better)
Translates to: GQHRTTTPEGWDYALCPIFQNIM*CFHQHT
Trigger: CGTATGTTGATGAAAACACCACATGATATTCTGGAA...TATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAATCTCTCTTGATGGCGCATTTCAGGACTaGCGTTTATGTCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: ALCPILQLEKPDILISLDGAFQD*RLCLPE
Trigger: TTCTGGAAGACATAAACGCCAGTCCTGAAATGCGCC...ATCAAGAGAGATTAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GAAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATCTTTCTTAGATGAGAGTTATCCAATTTaGGGCCTGGTGATGACAGAG +
Preference number: 4 (lower is better)
Translates to: EKHRPLQWKFSDLQSFLDESYPI*GLVMTE
Trigger: CTCTGTCATCACCAGGCCCCAAATTGGATAACTCTC...ATCTAAGAAAGATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATAAGAAGTTATACTGCTaGTGTCTTTCCCAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDKKLYC*CLSQWL
Trigger: AAGCCACTGGGAAAGACACCAGCAGTATAACTTCTT...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GAAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATCTTTCTTAGATCACTGCTCGGTTATATaGAGGACGAATAGACTGCAC +
Preference number: 4 (lower is better)
Translates to: EKHRPLQWKFSDLQSFLDHCSVI*RTNRLH
Trigger: GTGCAGTCTATTCGTCCTCCATATAACCGAGCAGTG...ATCTAAGAAAGATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACATAATTTGGTTGATATaGAAACTGTTGCGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHIIWLI*KLLRRS
Trigger: GCTCCTCCGCAACAGTTTCCATATCAACCAAATTAT...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp CAACTCAACACCATTAGTAAAGGACAATTCAGAATCACCAATTCCACTGGACAAACCAAAGGCTGGATCTaGTTGTTGTCCCATTCCATA +
Preference number: 4 (lower is better)
Translates to: QLNTISKGQFRITNSTGQTKGWI*LLSHSI
Trigger: TATGGAATGGGACAACAACCAGATCCAGCCTTTGGT...TTGTCCAGTGGAATTGGTGATTCTGAATTGTCCTTTACTAATGGTGTTGAGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTCCTTTCTTCCAAGATaGATGCCTGGAACAATGATT +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHSFLPR*MPGTMI
Trigger: AATCATTGTTCCAGGCATCCATCTTGGAAGAAAGGA...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp TTAGCATGTGAAAAGTTTGCTACTGCTGCGATTAAATACTGTCATCTCATTTCCGATGGAGCTCAAAGCTaGTCCTTTCTTCCAAGATGG +
Preference number: 4 (lower is better)
Translates to: LACEKFATAAIKYCHLISDGAQS*SFLPRW
Trigger: CCATCTTGGAAGAAAGGACCAGCTTTGAGCTCCATC...GGAAATGAGATGACAGTATTTAATCGCAGCAGTAGCAAACTTTTCACATGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTTCTTCCAATGTTCTCTaGCCCACCTACGTGTATTTA +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFSSNVL*PTYVYL
Trigger: TAAATACACGTAGGTGGGCCAGAGAACATTGGAAGA...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp TTAGCATGTGAAAAGTTTGCTACTGCTGCGATTAAATACTGTCATCTCATTTCCACTACACCTGAAGGCTaGGACTATGCTCTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LACEKFATAAIKYCHLISTTPEG*DYALCP
Trigger: TGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGT...GGAAATGAGATGACAGTATTTAATCGCAGCAGTAGCAAACTTTTCACATGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GAAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATCTTTCTTAGATAGCTGCACCCACCTCTaGATCAAAGAACTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: EKHRPLQWKFSDLQSFLDSCTHL*IKELLG
Trigger: TCCTAGAAGTTCTTTGATCCAGAGGTGGGTGCAGCT...ATCTAAGAAAGATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATAGGCATACATGTAACTaGCAATCCATTCTGTTTACT +
Preference number: 4 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHRHTCN*QSILFT
Trigger: AGTAAACAGAATGGATTGCCAGTTACATGTATGCCT...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTCTAATCCACTCATCTTaGATATACATCAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFLIHSS*IYISNW
Trigger: CCAGTTGCTGATGTATATTCAAGATGAGTGGATTAG...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACGATACATCGGCTTTTTaGACATCATCATCATTGGAA +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHDTSAF*TSSSLE
Trigger: TTCCAATGATGATGATGTTCAAAAAGCCGATGTATC...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp TTAGCATGTGAAAAGTTTGCTACTGCTGCGATTAAATACTGTCATCTCATTTCCTACGAGGAGAAATCATaGTATTCTGCTGGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: LACEKFATAAIKYCHLISYEEKS*YSAGLG
Trigger: CCCCAAACCAGCAGAATATCATGATTTCTCCTCGTA...GGAAATGAGATGACAGTATTTAATCGCAGCAGTAGCAAACTTTTCACATGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp CAACTCAACACCATTAGTAAAGGACAATTCAGAATCACCAATTCCACTGGACAATCTCTGCTATTTGACTaGCACATTGAACTCTCCACT +
Preference number: 4 (lower is better)
Translates to: QLNTISKGQFRITNSTGQSLLFD*HIELST
Trigger: AGTGGAGAGTTCAATGTGTCAGTCAAATAGCAGAGA...TTGTCCAGTGGAATTGGTGATTCTGAATTGTCCTTTACTAATGGTGTTGAGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GAAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATCTTTCTTAGATTGCTTAGTCCCCAGATaGCTACCATTTGAGGATATG +
Preference number: 4 (lower is better)
Translates to: EKHRPLQWKFSDLQSFLDCLVPR*LPFEDM
Trigger: CATATCCTCAAATGGTAGTCATCTGGGGACTAAGCA...ATCTAAGAAAGATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GAAGAGAGAAAACACCCTGCTCGTTTATTAACAGTGTGCCTTGGAGTTGAAAACCCTTGCTGGTTCATCTaGTTCATCATAGAGTTAAAA +
Preference number: 4 (lower is better)
Translates to: EERKHPARLLTVCLGVENPCWFI*FIIELK
Trigger: TTTTAACTCTATGATGAATCAGATGAACCAGCAAGG...GTTTTCAACTCCAAGGCACACTGTTAATAAACGAGCAGGGTGTTTTCTCTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GAAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATCTTTCTTAGATGGATGCCTGGAACAATaGTTCCTTCCCAATAATCCT +
Preference number: 4 (lower is better)
Translates to: EKHRPLQWKFSDLQSFLDGCLEQ*FLPNNP
Trigger: AGGATTATTGGGAAGGAATCATTGTTCCAGGCATCC...ATCTAAGAAAGATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAGACACAAAAGTTTTATaGTCAGTAACACTCCATGTC +
Preference number: 4 (lower is better)
Translates to: GWDYALCPILQLEKPDILDTKVL*SVTLHV
Trigger: GACATGGAGTGTTACTGATCATAAAACTTTTGTGTC...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACGACACAAAAGTTTTATaGTCAGTAACACTCCATGTC +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHDTKVL*SVTLHV
Trigger: GACATGGAGTGTTACTGATCATAAAACTTTTGTGTC...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp TTAGCATGTGAAAAGTTTGCTACTGCTGCGATTAAATACTGTCATCTCATTTCCCACACACACAGCCCATaGATTGCTATTATTTCGGAC +
Preference number: 4 (lower is better)
Translates to: LACEKFATAAIKYCHLISHTHSP*IAIISD
Trigger: GTCCGAAATAATAGCAATTCATGGGCTGTGTGTGTG...GGAAATGAGATGACAGTATTTAATCGCAGCAGTAGCAAACTTTTCACATGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAATCTCTCTTGATGGAGAGTATACTATCTaGAAAGCACAGGCCACTACA +
Preference number: 4 (lower is better)
Translates to: ALCPILQLEKPDILISLDGEYTI*KAQATT
Trigger: TGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCC...ATCAAGAGAGATTAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTTATCACATGGCAATTTaGGTTTTCGTGAATCACTGG +
Preference number: 4 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVYHMAI*VFVNHW
Trigger: CCAGTGATTCACGAAAACGCAAATTGCCATGTGATA...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTAACCAGGTCCTCTTaGTTATATTGCAGGTATTGT +
Preference number: 4 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHLTRSS*LYCRYC
Trigger: ACAATACCTGCAATATAAGCAAGAGGACCTGGTTAA...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTTTCTGGGACCATGACTaGCCATCATTTAGACTAAAA +
Preference number: 4 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVFWDHD*PSFRLK
Trigger: TTTTAGTCTAAATGATGGGCAGTCATGGTCCCAGAA...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp TTAGCATGTGAAAAGTTTGCTACTGCTGCGATTAAATACTGTCATCTCATTTCCCACAAGAAGTTATACTaGTGGTGTCTTTCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: LACEKFATAAIKYCHLISHKKLY*WCLSQW
Trigger: CCACTGGGAAAGACACCAGCAGTATAACTTCTTGTG...GGAAATGAGATGACAGTATTTAATCGCAGCAGTAGCAAACTTTTCACATGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp TTAGCATGTGAAAAGTTTGCTACTGCTGCGATTAAATACTGTCATCTCATTTCCCTGATCCATCATTACTaGTGCTTCTTGGCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: LACEKFATAAIKYCHLISLIHHY*CFLALE
Trigger: TTCCAAGGCCAAGAAGCAGCAGTAATGATGGATCAG...GGAAATGAGATGACAGTATTTAATCGCAGCAGTAGCAAACTTTTCACATGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GAAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATCTTTCTTAGATCTGCTGCCATTCATGTaGACCATACTATACACTGCA +
Preference number: 4 (lower is better)
Translates to: EKHRPLQWKFSDLQSFLDLLPFM*TILYTA
Trigger: TGCAGTGTATAGTATGGTGCACATGAATGGCAGCAG...ATCTAAGAAAGATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAATCTCTCTTGATCTTAAGAGGTCCTGGTaGAGAGATGTCAGCAGTATT +
Preference number: 4 (lower is better)
Translates to: ALCPILQLEKPDILISLDLKRSW*RDVSSI
Trigger: AATACTGCTGACATCTCTGCACCAGGACCTCTTAAG...ATCAAGAGAGATTAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGACACAGCCCATGAATTaGTATTATTTCGGACTGCTT +
Preference number: 4 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRTQPMN*YYFGLL
Trigger: AAGCAGTCCGAAATAATAGCAATTCATGGGCTGTGT...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTATATACATCAGCAACTaGCTAACCAGTCAAAGGATG +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFIYISN*LTSQRM
Trigger: CATCCTTTGACTGGTTAGCCAGTTGCTGATGTATAT...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATTTCCAGAATATCATGTaGTGTTTTCATCAACATACG +
Preference number: 4 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHFQNIM*CFHQHT
Trigger: CGTATGTTGATGAAAACACCACATGATATTCTGGAA...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp TTAGCATGTGAAAAGTTTGCTACTGCTGCGATTAAATACTGTCATCTCATTTCCATTGTTTCATATCTCTaGCGCATTTCAGGACTGGCG +
Preference number: 4 (lower is better)
Translates to: LACEKFATAAIKYCHLISIVSYL*RISGLA
Trigger: CGCCAGTCCTGAAATGCGCCAGAGATATGAAACAAT...GGAAATGAGATGACAGTATTTAATCGCAGCAGTAGCAAACTTTTCACATGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAAAACAGGATTTGGGTTTaGTCTATATCCATTCTGTTC +
Preference number: 4 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKNRIWV*SISILF
Trigger: GAACAGAATGGATATAGACCAAACCCAAATCCTGTT...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTATTGTCCAACAGGATTTaGGTTTGGTCTATATCCATT +
Preference number: 4 (lower is better)
Translates to: GWDYALCPILQLEKPDILLSNRI*VWSISI
Trigger: AATGGATATAGACCAAACCCAAATCCTGTTGGACAA...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp TTAGCATGTGAAAAGTTTGCTACTGCTGCGATTAAATACTGTCATCTCATTTCCATCATGATATTCTGCTaGTTTGGGGCAAGACCAGGA +
Preference number: 4 (lower is better)
Translates to: LACEKFATAAIKYCHLISIMIFC*FGARPG
Trigger: TCCTGGTCTTGCCCCAAACCAGCAGAATATCATGAT...GGAAATGAGATGACAGTATTTAATCGCAGCAGTAGCAAACTTTTCACATGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAATCTCTCTTGATAGAAGAGTGTGCAGCTaGTCCAATAATGCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: ALCPILQLEKPDILISLDRRVCS*SNNALS
Trigger: CGAAAGAGCATTATTGGACCAGCTGCACACTCTTCT...ATCAAGAGAGATTAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATATAATTTGGTTGATATaGAAACTGTTGCGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDIIWLI*KLLRRS
Trigger: GCTCCTCCGCAACAGTTTCCATATCAACCAAATTAT...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GAAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATCTTTCTTAGATTCCAAGATGGATGCCTaGAACAATGATTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: EKHRPLQWKFSDLQSFLDSKMDA*NNDSFP
Trigger: TGGGAAGGAATCATTGTTCCAGGCATCCATCTTGGA...ATCTAAGAAAGATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATTGCAGTACCTGGCCTTaGGTTTTCAGAAGTTTATTT +
Preference number: 4 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDCSTWP*VFRSLF
Trigger: AAATAAACTTCTGAAAACCCAAGGCCAGGTACTGCA...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGCACAGGCCACTACAATaGAAGTTTTCGGATTTACAA +
Preference number: 4 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRHRPLQ*KFSDLQ
Trigger: TTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTG...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTCACAGGCCACTACAATaGAAGTTTTCGGATTTACAA +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFHRPLQ*KFSDLQ
Trigger: TTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTG...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATCACAGGCCACTACAATaGAAGTTTTCGGATTTACAA +
Preference number: 4 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDHRPLQ*KFSDLQ
Trigger: TTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTG...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAATCTCTCTTGATATTTTTATTGGTCTCTaGGTCCACCATCCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: ALCPILQLEKPDILISLDIFIGL*VHHPAS
Trigger: ACTTGCTGGATGGTGGACTCAGAGACCAATAAAAAT...ATCAAGAGAGATTAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATGATACATCGGCTTTTTaGACATCATCATCATTGGAA +
Preference number: 4 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDDTSAF*TSSSLE
Trigger: TTCCAATGATGATGATGTTCAAAAAGCCGATGTATC...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAATCTCTCTTGATAAAGCTCTCAGGGTTTaGTGGAAATGTTCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: ALCPILQLEKPDILISLDKALRV*WKCSFS
Trigger: GGAGAAAGAACATTTCCATCAAACCCTGAGAGCTTT...ATCAAGAGAGATTAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GAAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATCTTTCTTAGATAAAGCTCTCAGGGTTTaGTGGAAATGTTCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: EKHRPLQWKFSDLQSFLDKALRV*WKCSFS
Trigger: GGAGAAAGAACATTTCCATCAAACCCTGAGAGCTTT...ATCTAAGAAAGATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGCATGGAGGATCTCAGTaGATTTGTATCTATATTGAC +
Preference number: 4 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRHGGSQ*ICIYID
Trigger: GTCAATATAGATACAAATTCACTGAGATCCTCCATG...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCCTTGCTGGTTCATCTaGTTCATCATAGAGTTAAAA +
Preference number: 4 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVPCWFI*FIIELK
Trigger: TTTTAACTCTATGATGAATCAGATGAACCAGCAAGG...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp TTAGCATGTGAAAAGTTTGCTACTGCTGCGATTAAATACTGTCATCTCATTTCCCCAGTCCTGCTCAAATaGCATCACTTAAAATACCCT +
Preference number: 4 (lower is better)
Translates to: LACEKFATAAIKYCHLISPVLLK*HHLKYP
Trigger: AGGGTATTTTAAGTGATGTCATTTGAGCAGGACTGG...GGAAATGAGATGACAGTATTTAATCGCAGCAGTAGCAAACTTTTCACATGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGGACACAAAAGTTTTATaGTCAGTAACACTCCATGTC +
Preference number: 4 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRDTKVL*SVTLHV
Trigger: GACATGGAGTGTTACTGATCATAAAACTTTTGTGTC...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTATATATTTACTTTCCTaGTCCCGTCTCCGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVIYLLS*SRLRFS
Trigger: TGAAAAACGGAGACGGGAGCAGGAAAGTAAATATAT...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTATATATTTACTTTCCTaGTCCCGTCTCCGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFIYLLS*SRLRFS
Trigger: TGAAAAACGGAGACGGGAGCAGGAAAGTAAATATAT...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GAAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATCTTTCTTAGATCAGATCATACAAGATTaGAAATCTTCCCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: EKHRPLQWKFSDLQSFLDQIIQD*KSSPSS
Trigger: GGAGGAAGGGGAAGATTTGCAATCTTGTATGATCTG...ATCTAAGAAAGATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp CAACTCAACACCATTAGTAAAGGACAATTCAGAATCACCAATTCCACTGGACAATTCTGGGACCATGACTaGCCATCATTTAGACTAAAA +
Preference number: 4 (lower is better)
Translates to: QLNTISKGQFRITNSTGQFWDHD*PSFRLK
Trigger: TTTTAGTCTAAATGATGGGCAGTCATGGTCCCAGAA...TTGTCCAGTGGAATTGGTGATTCTGAATTGTCCTTTACTAATGGTGTTGAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp CAACTCAACACCATTAGTAAAGGACAATTCAGAATCACCAATTCCACTGGACAATTCTTAGGACTTAGCTaGTCCTGCTTGACAACATTT +
Preference number: 4 (lower is better)
Translates to: QLNTISKGQFRITNSTGQFLGLS*SCLTTF
Trigger: AAATGTTGTCAAGCAGGAGCAGCTAAGTCCTAAGAA...TTGTCCAGTGGAATTGGTGATTCTGAATTGTCCTTTACTAATGGTGTTGAGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTCCCAAATTAACAAAGTaGTTAGTTCTGGTAGAGGAA +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFPKLTK*LVLVEE
Trigger: TTCCTCTACCAGAACTAAGCACTTTGTTAATTTGGG...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCCCAAATTAACAAAGTaGTTAGTTCTGGTAGAGGAA +
Preference number: 4 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVPKLTK*LVLVEE
Trigger: TTCCTCTACCAGAACTAAGCACTTTGTTAATTTGGG...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp CAACTCAACACCATTAGTAAAGGACAATTCAGAATCACCAATTCCACTGGACAAACACAGCCCATGAATTaGTATTATTTCGGACTGCTT +
Preference number: 4 (lower is better)
Translates to: QLNTISKGQFRITNSTGQTQPMN*YYFGLL
Trigger: AAGCAGTCCGAAATAATAGCAATTCATGGGCTGTGT...TTGTCCAGTGGAATTGGTGATTCTGAATTGTCCTTTACTAATGGTGTTGAGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp CAACTCAACACCATTAGTAAAGGACAATTCAGAATCACCAATTCCACTGGACAAATATACATCAGCAACTaGCTAACCAGTCAAAGGATG +
Preference number: 4 (lower is better)
Translates to: QLNTISKGQFRITNSTGQIYISN*LTSQRM
Trigger: CATCCTTTGACTGGTTAGCCAGTTGCTGATGTATAT...TTGTCCAGTGGAATTGGTGATTCTGAATTGTCCTTTACTAATGGTGTTGAGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTATTCCAGAATATCATGTaGTGTTTTCATCAACATACG +
Preference number: 4 (lower is better)
Translates to: GWDYALCPILQLEKPDILFQNIM*CFHQHT
Trigger: CGTATGTTGATGAAAACACCACATGATATTCTGGAA...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTAACAGGATTTGGGTTTaGTCTATATCCATTCTGTTC +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFNRIWV*SISILF
Trigger: GAACAGAATGGATATAGACCAAACCCAAATCCTGTT...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATTTGTCCAACAGGATTTaGGTTTGGTCTATATCCATT +
Preference number: 4 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDLSNRI*VWSISI
Trigger: AATGGATATAGACCAAACCCAAATCCTGTTGGACAA...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAATCTCTCTTGATAATCACCAATTCCACTaGACAAAGGGTCAACACAGA +
Preference number: 4 (lower is better)
Translates to: ALCPILQLEKPDILISLDNHQFH*TKGQHR
Trigger: TCTGTGTTGACCCTTTGTCCAGTGGAATTGGTGATT...ATCAAGAGAGATTAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp CAACTCAACACCATTAGTAAAGGACAATTCAGAATCACCAATTCCACTGGACAAATTGACAACCTTTCCTaGAAGATCATGTCTGGTAAT +
Preference number: 4 (lower is better)
Translates to: QLNTISKGQFRITNSTGQIDNLS*KIMSGN
Trigger: ATTACCAGACATGATCTTTCAGGAAAGGTTGTCAAT...TTGTCCAGTGGAATTGGTGATTCTGAATTGTCCTTTACTAATGGTGTTGAGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GAAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATCTTTCTTAGATTATCACATGGCAATTTaGGTTTTCGTGAATCACTGG +
Preference number: 4 (lower is better)
Translates to: EKHRPLQWKFSDLQSFLDYHMAI*VFVNHW
Trigger: CCAGTGATTCACGAAAACGCAAATTGCCATGTGATA...ATCTAAGAAAGATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTTCCTCTTGCTTATATTaGAGGTATTGTGTGACATTT +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFSSCLY*RYCVTF
Trigger: AAATGTCACACAATACCTGCAATATAAGCAAGAGGA...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAATCCTCTTGCTTATATTaGAGGTATTGTGTGACATTT +
Preference number: 4 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQESSCLY*RYCVTF
Trigger: AAATGTCACACAATACCTGCAATATAAGCAAGAGGA...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCAGGTATCTAAGAAGTaGATTATTCTCCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVQVSKK*IILLLL
Trigger: AAGAAGAAGGAGAATAATGCACTTCTTAGATACCTG...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATCAGGTATCTAAGAAGTaGATTATTCTCCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDQVSKK*IILLLL
Trigger: AAGAAGAAGGAGAATAATGCACTTCTTAGATACCTG...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATTATTCACAGAAACACTaGGAGATTCTGATTCAGAAT +
Preference number: 4 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDYSQKH*EILIQN
Trigger: ATTCTGAATCAGAATCTCGCAGTGTTTCTGTGAATA...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTTATTCACAGAAACACTaGGAGATTCTGATTCAGAAT +
Preference number: 4 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFYSQKH*EILIQN
Trigger: ATTCTGAATCAGAATCTCGCAGTGTTTCTGTGAATA...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp CAACTCAACACCATTAGTAAAGGACAATTCAGAATCACCAATTCCACTGGACAAAACAGGATTTGGGTTTaGTCTATATCCATTCTGTTC +
Preference number: 4 (lower is better)
Translates to: QLNTISKGQFRITNSTGQNRIWV*SISILF
Trigger: GAACAGAATGGATATAGACCAAACCCAAATCCTGTT...TTGTCCAGTGGAATTGGTGATTCTGAATTGTCCTTTACTAATGGTGTTGAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp GAAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATCTTTCTTAGATTGCAGTACCTGGCCTTaGGTTTTCAGAAGTTTATTT +
Preference number: 4 (lower is better)
Translates to: EKHRPLQWKFSDLQSFLDCSTWP*VFRSLF
Trigger: AAATAAACTTCTGAAAACCCAAGGCCAGGTACTGCA...ATCTAAGAAAGATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp GCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAATCTCTCTTGATATTGACAACCTTTCCTaGAAGATCATGTCTGGTAAT +
Preference number: 4 (lower is better)
Translates to: ALCPILQLEKPDILISLDIDNLS*KIMSGN
Trigger: ATTACCAGACATGATCTTTCAGGAAAGGTTGTCAAT...ATCAAGAGAGATTAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR TCA 90 bp TTAGCATGTGAAAAGTTTGCTACTGCTGCGATTAAATACTGTCATCTCATTTCCCCTTGCTGGTTCATCTaGTTCATCATAGAGTTAAAA +
Preference number: 4 (lower is better)
Translates to: LACEKFATAAIKYCHLISPCWFI*FIIELK
Trigger: TTTTAACTCTATGATGAATCAGATGAACCAGCAAGG...GGAAATGAGATGACAGTATTTAATCGCAGCAGTAGCAAACTTTTCACATGCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GAAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATCTTTCTTAGATCCCAAATTAACAAAGTaGTTAGTTCTGGTAGAGGAA +
Preference number: 4 (lower is better)
Translates to: EKHRPLQWKFSDLQSFLDPKLTK*LVLVEE
Trigger: TTCCTCTACCAGAACTAAGCACTTTGTTAATTTGGG...ATCTAAGAAAGATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CCA 90 bp CAACTCAACACCATTAGTAAAGGACAATTCAGAATCACCAATTCCACTGGACAAATTAAGATAAGCTGTTaGGGAAAATATCCCATCACT +
Preference number: 4 (lower is better)
Translates to: QLNTISKGQFRITNSTGQIKISC*GKYPIT
Trigger: AGTGATGGGATATTTTCCCCAACAGCTTATCTTAAT...TTGTCCAGTGGAATTGGTGATTCTGAATTGTCCTTTACTAATGGTGTTGAGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371997.3
CDS-3UTR CCA 90 bp GCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAATCTCTCTTGATAGGCATACATGTAACTaGCAATCCATTCTGTTTACT +
Preference number: 4 (lower is better)
Translates to: ALCPILQLEKPDILISLDRHTCN*QSILFT
Trigger: AGTAAACAGAATGGATTGCCAGTTACATGTATGCCT...ATCAAGAGAGATTAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR GCA 90 bp GAAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATCTTTCTTAGATCAGGTATCTAAGAAGTaGATTATTCTCCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: EKHRPLQWKFSDLQSFLDQVSKK*IILLLL
Trigger: AAGAAGAAGGAGAATAATGCACTTCTTAGATACCTG...ATCTAAGAAAGATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 90 bp GGTGGGCTGAAGGCCTGGGTTTGCTGCTGTTGCTGCTGTTGCTGTTaGTGTTGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGC +
Preference number: 5 (lower is better)
Translates to: GGLKAWVCCCCCCCC*CCCCCCCCCCCCCC
Trigger: GCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACAGCAACAGCAACAGCAGCAACAGCAGCAAACCCAGGCCTTCAGCCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 90 bp TGCTGTTGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGCTaGTGCTGCTGCTGCTGCATCATCATAGCCACCCTCTGTTGTCGG +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CCCCCIIIATLCCR
Trigger: CCGACAACAGAGGGTGGCTATGATGATGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 90 bp TGTTGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTaGTGCTGCTGCTGCATCATCATAGCCACCCTCTGTTGTCGGAAG +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CCCCIIIATLCCRK
Trigger: CTTCCGACAACAGAGGGTGGCTATGATGATGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 90 bp GTCACATTAGGAGGTGGGCTGAAGGCCTGGGTTTGCTGCTGTTGCTaGTGTTGCTGTTGCTGTTGCTGTTGCTGCTGCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: VTLGGGLKAWVCCCC*CCCCCCCCCCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAACAGCAACAGCAACAGCAACAGCAGCAACAGCAGCAAACCCAGGCCTTCAGCCCACCTCCTAATGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 90 bp GCAGTCACATTAGGAGGTGGGCTGAAGGCCTGGGTTTGCTGCTGTTaGTGCTGTTGCTGTTGCTGTTGCTGTTGCTGCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: AVTLGGGLKAWVCCC*CCCCCCCCCCCCCC
Trigger: GCAGCAGCAGCAGCAGCAACAGCAACAGCAACAGCAACAGCAGCAACAGCAGCAAACCCAGGCCTTCAGCCCACCTCCTAATGTGACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 90 bp CTGGGGGAAGCAGTCACATTAGGAGGTGGGCTGAAGGCCTGGGTTTaGTGCTGTTGCTGCTGTTGCTGTTGCTGTTGCTGTTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: LGEAVTLGGGLKAWV*CCCCCCCCCCCCCC
Trigger: GCAGCAGCAACAGCAACAGCAACAGCAACAGCAGCAACAGCAGCAAACCCAGGCCTTCAGCCCACCTCCTAATGTGACTGCTTCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 90 bp GGACAACATGCCATCGGGCCAGGAACCCAGTTGGTTAGATGCTGCTaGTTGGCCATAGGGATTAGCCCCCATTCCCATGGGGATTTCACC +
Preference number: 5 (lower is better)
Translates to: GQHAIGPGTQLVRCC*LAIGISPHSHGDFT
Trigger: GGTGAAATCCCCATGGGAATGGGGGCTAATCCCTATGGCCAAGCAGCAGCATCTAACCAACTGGGTTCCTGGCCCGATGGCATGTTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 90 bp TGTTGCTGTTGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTaGTGCTGCTGCTGCTGCTGCATCATCATAGCCACCCTCTGTTGT +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CCCCCCIIIATLCC
Trigger: ACAACAGAGGGTGGCTATGATGATGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACAGCAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CCA 90 bp TCCATGCTGGGGGAAGCAGTCACATTAGGAGGTGGGCTGAAGGCCTaGGTTTGCTGCTGTTGCTGCTGTTGCTGTTGCTGTTGCTGTTGC +
Preference number: 5 (lower is better)
Translates to: SMLGEAVTLGGGLKA*VCCCCCCCCCCCCC
Trigger: GCAACAGCAACAGCAACAGCAACAGCAGCAACAGCAGCAAACCCAGGCCTTCAGCCCACCTCCTAATGTGACTGCTTCCCCCAGCATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 90 bp CATGGACAACATGCCATCGGGCCAGGAACCCAGTTGGTTAGATGCTaGTGCTTGGCCATAGGGATTAGCCCCCATTCCCATGGGGATTTC +
Preference number: 5 (lower is better)
Translates to: HGQHAIGPGTQLVRC*CLAIGISPHSHGDF
Trigger: GAAATCCCCATGGGAATGGGGGCTAATCCCTATGGCCAAGCAGCAGCATCTAACCAACTGGGTTCCTGGCCCGATGGCATGTTGTCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 90 bp TTCCATGGACAACATGCCATCGGGCCAGGAACCCAGTTGGTTAGATaGTGCTGCTTGGCCATAGGGATTAGCCCCCATTCCCATGGGGAT +
Preference number: 5 (lower is better)
Translates to: FHGQHAIGPGTQLVR*CCLAIGISPHSHGD
Trigger: ATCCCCATGGGAATGGGGGCTAATCCCTATGGCCAAGCAGCAGCATCTAACCAACTGGGTTCCTGGCCCGATGGCATGTTGTCCATGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 90 bp TTGATATGGAAACTGTTGCGGAGGAGCTTGTGGCATTGTGGGTCCTaGCAAAAGCCCATCCATGCTGGGGGAAGCAGTCACATTAGGAGG +
Preference number: 5 (lower is better)
Translates to: LIWKLLRRSLWHCGS*QKPIHAGGSSHIRR
Trigger: CCTCCTAATGTGACTGCTTCCCCCAGCATGGATGGGCTTTTGGCAGGACCCACAATGCCACAAGCTCCTCCGCAACAGTTTCCATATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 90 bp TCCCATGTGACCACTGCTGCCATTCATGTGCACCATACTATACACTaGAGGATTCCCCTGGTGGGCAAACTGCTGCTGGGAAAAGGAGCT +
Preference number: 5 (lower is better)
Translates to: SHVTTAAIHVHHTIH*RIPLVGKLLLGKGA
Trigger: AGCTCCTTTTCCCAGCAGCAGTTTGCCCACCAGGGGAATCCTGCAGTGTATAGTATGGTGCACATGAATGGCAGCAGTGGTCACATGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CCA 90 bp CTGAGAAGAGTGTGCAGCTGGTCCAATAATGCTCTTTCGTCACTCTaGCCTTCCAGGTTGGAAGGTGGCCCAACAAGATCATCCAGGGAA +
Preference number: 5 (lower is better)
Translates to: LRRVCSWSNNALSSL*PSRLEGGPTRSSRE
Trigger: TTCCCTGGATGATCTTGTTGGGCCACCTTCCAACCTGGAAGGCCAGAGTGACGAAAGAGCATTATTGGACCAGCTGCACACTCTTCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CCA 90 bp TCTTCCAGGCCTGTGGCATCTGTGTTGCTGAGAAGAGTGTGCAGCTaGTCCAATAATGCTCTTTCGTCACTCTGGCCTTCCAGGTTGGAA +
Preference number: 5 (lower is better)
Translates to: SSRPVASVLLRRVCS*SNNALSSLWPSRLE
Trigger: TTCCAACCTGGAAGGCCAGAGTGACGAAAGAGCATTATTGGACCAGCTGCACACTCTTCTCAGCAACACAGATGCCACAGGCCTGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GGTCAACACAGAACTACTACACCTGAAGGCTGGGACTATGCTCTTTGTCCAATAGAAAGCCTCCTTGCATaGGAGGCCCCTGTGCTGGGT +
Preference number: 5 (lower is better)
Translates to: GQHRTTTPEGWDYALCPIESLLA*EAPVLG
Trigger: ACCCAGCACAGGGGCCTCCAATGCAAGGAGGCTTTC...TATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GGTCAACACAGAACTACTACACCTGAAGGCTGGGACTATGCTCTTTGTCCAATACTGTTGCGGAGGAGCTaGTGGCATTGTGGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: GQHRTTTPEGWDYALCPILLRRS*WHCGSC
Trigger: GCAGGACCCACAATGCCACAAGCTCCTCCGCAACAG...TATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS TCA 90 bp GATGTGAGGCTATCTTTGGACTCCCACGATTACGAGGAGAAATCATaGTATTCTGCTGGTTTGGGGCAAGACCAGGACTCCCATGTGGGG +
Preference number: 5 (lower is better)
Translates to: DVRLSLDSHDYEEKS*YSAGLGQDQDSHVG
Trigger: CCCCACATGGGAGTCCTGGTCTTGCCCCAAACCAGCAGAATATCATGATTTCTCCTCGTAATCGTGGGAGTCCAAAGATAGCCTCACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 90 bp ACATGGGCATGGGGTTCATGTTCATCTGTCCCATGTGACCACTGCTaGCATTCATGTGCACCATACTATACACTGCAGGATTCCCCTGGT +
Preference number: 5 (lower is better)
Translates to: TWAWGSCSSVPCDHC*HSCAPYYTLQDSPG
Trigger: ACCAGGGGAATCCTGCAGTGTATAGTATGGTGCACATGAATGGCAGCAGTGGTCACATGGGACAGATGAACATGAACCCCATGCCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 90 bp CAGACATGGGCATGGGGTTCATGTTCATCTGTCCCATGTGACCACTaGTGCCATTCATGTGCACCATACTATACACTGCAGGATTCCCCT +
Preference number: 5 (lower is better)
Translates to: QTWAWGSCSSVPCDH*CHSCAPYYTLQDSP
Trigger: AGGGGAATCCTGCAGTGTATAGTATGGTGCACATGAATGGCAGCAGTGGTCACATGGGACAGATGAACATGAACCCCATGCCCATGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CCA 90 bp TTCACCAGGCCTCATTTGAAGCATCTGCTGCTGCTGTTGCAATACTaGTCTCGCACCTGGTATGCTATTAGACCGAAGAGGCAATGTGGG +
Preference number: 5 (lower is better)
Translates to: FTRPHLKHLLLLLQY*SRTWYAIRPKRQCG
Trigger: CCCACATTGCCTCTTCGGTCTAATAGCATACCAGGTGCGAGACCAGTATTGCAACAGCAGCAGCAGATGCTTCAAATGAGGCCTGGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CCA 90 bp AATTTGGTTGATATGGAAACTGTTGCGGAGGAGCTTGTGGCATTGTaGGTCCTGCCAAAAGCCCATCCATGCTGGGGGAAGCAGTCACAT +
Preference number: 5 (lower is better)
Translates to: NLVDMETVAEELVAL*VLPKAHPCWGKQSH
Trigger: ATGTGACTGCTTCCCCCAGCATGGATGGGCTTTTGGCAGGACCCACAATGCCACAAGCTCCTCCGCAACAGTTTCCATATCAACCAAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CCA 90 bp CATTCCATAATTTGGTTGATATGGAAACTGTTGCGGAGGAGCTTGTaGCATTGTGGGTCCTGCCAAAAGCCCATCCATGCTGGGGGAAGC +
Preference number: 5 (lower is better)
Translates to: HSIIWLIWKLLRRSL*HCGSCQKPIHAGGS
Trigger: GCTTCCCCCAGCATGGATGGGCTTTTGGCAGGACCCACAATGCCACAAGCTCCTCCGCAACAGTTTCCATATCAACCAAATTATGGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CCA 90 bp TTTCTGAGGACTGATAGATGGATGCAGCCTGCGGGTGTTGCATCATaGGATTCTGGGAGGGACCCATTCTTGACGACATCATTGCATTGG +
Preference number: 5 (lower is better)
Translates to: FLRTDRWMQPAGVAS*DSGRDPFLTTSLHW
Trigger: CCAATGCAATGATGTCGTCAAGAATGGGTCCCTCCCAGAATCCCATGATGCAACACCCGCAGGCTGCATCCATCTATCAGTCCTCAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGCCGCCTACCGAACTGTaGCATCCAGCCATAGGTGGT +
Preference number: 5 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRPPTEL*HPAIGG
Trigger: ACCACCTATGGCTGGATGCAACAGTTCGGTAGGCGG...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGGGGCCAGGAACCCAGTaGGTTAGATGCTGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRGPGTQ*VRCCCL
Trigger: CAAGCAGCAGCATCTAACCAACTGGGTTCCTGGCCC...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGGAGGAGCTTGTGGCATaGTGGGTCCTGCCAAAAGCC +
Preference number: 5 (lower is better)
Translates to: IELKKRQTDLVLPLSPNREELVA*WVLPKA
Trigger: GGCTTTTGGCAGGACCCACAATGCCACAAGCTCCTC...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGTGCAGCCTGCGGGTGTaGCATCATGGGATTCTGGGA +
Preference number: 5 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRCSLRV*HHGILG
Trigger: TCCCAGAATCCCATGATGCAACACCCGCAGGCTGCA...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GGTCAACACAGAACTACTACACCTGAAGGCTGGGACTATGCTCTTTGTCCAATATGCCGGCCTTTGAGTTaGGTAAGCCCCAGTCTCCTG +
Preference number: 5 (lower is better)
Translates to: GQHRTTTPEGWDYALCPICRPLS*VSPSLL
Trigger: CAGGAGACTGGGGCTTACCAAACTCAAAGGCCGGCA...TATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS CCA 90 bp CGACATACTCATGCCGCCTACCGAACTGTTGCATCCAGCCATAGGTaGTCTAATCCCTTGTCCAACAGGATTTGGGTTTGGTCTATATCC +
Preference number: 5 (lower is better)
Translates to: RHTHAAYRTVASSHR*SNPLSNRIWVWSIS
Trigger: GGATATAGACCAAACCCAAATCCTGTTGGACAAGGGATTAGACCACCTATGGCTGGATGCAACAGTTCGGTAGGCGGCATGAGTATGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CCA 90 bp CATTTGAAGCATCTGCTGCTGCTGTTGCAATACTGGTCTCGCACCTaGTATGCTATTAGACCGAAGAGGCAATGTGGGAATAGAGCCACC +
Preference number: 5 (lower is better)
Translates to: HLKHLLLLLQYWSRT*YAIRPKRQCGNRAT
Trigger: GGTGGCTCTATTCCCACATTGCCTCTTCGGTCTAATAGCATACCAGGTGCGAGACCAGTATTGCAACAGCAGCAGCAGATGCTTCAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATCCGCCTACCGAACTGTaGCATCCAGCCATAGGTGGT +
Preference number: 5 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHPPTEL*HPAIGG
Trigger: ACCACCTATGGCTGGATGCAACAGTTCGGTAGGCGG...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGACCTTCACTGATGGCTaGCAGGGCACTGAGAGAGCT +
Preference number: 5 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRTFTDG*QGTERA
Trigger: AGCTCTCTCAGTGCCCTGCAAGCCATCAGTGAAGGT...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGACCTTCACTGATGGCTaGCAGGGCACTGAGAGAGCT +
Preference number: 5 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRTFTDG*QGTERA
Trigger: AGCTCTCTCAGTGCCCTGCAAGCCATCAGTGAAGGT...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GGTCAACACAGAACTACTACACCTGAAGGCTGGGACTATGCTCTTTGTCCAATACCATTCTGCCGGCCTTaGAGTTTGGTAAGCCCCAGT +
Preference number: 5 (lower is better)
Translates to: GQHRTTTPEGWDYALCPIPFCRP*SLVSPS
Trigger: ACTGGGGCTTACCAAACTCAAAGGCCGGCAGAATGG...TATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GGTCAACACAGAACTACTACACCTGAAGGCTGGGACTATGCTCTTTGTCCAATAGTTAGATGCTGCTGCTaGGCCATAGGGATTAGCCCC +
Preference number: 5 (lower is better)
Translates to: GQHRTTTPEGWDYALCPIVRCCC*AIGISP
Trigger: GGGGCTAATCCCTATGGCCAAGCAGCAGCATCTAAC...TATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGCCTGTGGCATCTGTGTaGCTGAGAAGAGTGTGCAGC +
Preference number: 5 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRPVASV*LRRVCS
Trigger: GCTGCACACTCTTCTCAGCAACACAGATGCCACAGG...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGAAGATGAAAGCCTCCTaGCATTGGAGGCCCCTGTGC +
Preference number: 5 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRKMKAS*HWRPLC
Trigger: GCACAGGGGCCTCCAATGCAAGGAGGCTTTCATCTT...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGCAGCTCTCTGCTGCGTaGGGCGACCATTTGAGCATT +
Preference number: 5 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRQLSAA*GDHLSI
Trigger: AATGCTCAAATGGTCGCCCAACGCAGCAGAGAGCTG...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATGAGGAGCTTGTGGCATaGTGGGTCCTGCCAAAAGCC +
Preference number: 5 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHEELVA*WVLPKA
Trigger: GGCTTTTGGCAGGACCCACAATGCCACAAGCTCCTC...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACCTGTTGCGGAGGAGCTaGTGGCATTGTGGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYLLRRS*WHCGSC
Trigger: GCAGGACCCACAATGCCACAAGCTCCTCCGCAACAG...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS TCA 90 bp CCAAAGCTCTGTCAATTTCTTCCAGGCCTGTGGCATCTGTGTTGCTaGGAAGAGTGTGCAGCTGGTCCAATAATGCTCTTTCGTCACTCT +
Preference number: 5 (lower is better)
Translates to: PKLCQFLPGLWHLCC*EECAAGPIMLFRHS
Trigger: AGAGTGACGAAAGAGCATTATTGGACCAGCTGCACACTCTTCTCAGCAACACAGATGCCACAGGCCTGGAAGAAATTGACAGAGCTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGTTCCAAAGGACCCCTTaGATTCTCTGCCCCCTCAAC +
Preference number: 5 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRFQRTP*ILCPLN
Trigger: GTTGAGGGGGCAGAGAATCAAAGGGGTCCTTTGGAA...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGCTTAGCTGCTCCTGCTaGACAACATTTCCGTCCCCA +
Preference number: 5 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRLSCSC*TTFPSP
Trigger: TGGGGACGGAAATGTTGTCAAGCAGGAGCAGCTAAG...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATCCATTCTGCCGGCCTTaGAGTTTGGTAAGCCCCAGT +
Preference number: 5 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHPFCRP*SLVSPS
Trigger: ACTGGGGCTTACCAAACTCAAAGGCCGGCAGAATGG...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGTTCACCAGGCCTCATTaGAAGCATCTGCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRFTRPH*KHLLLL
Trigger: CAGCAGCAGCAGATGCTTCAAATGAGGCCTGGTGAA...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAAGGGCCAGGAACCCAGTaGGTTAGATGCTGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKGPGTQ*VRCCCL
Trigger: CAAGCAGCAGCATCTAACCAACTGGGTTCCTGGCCC...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GAAGAGAGAAAACACCCTGCTCGTTTATTAACAGTGTGCCTTGGAGTTGAAAACGGGCCAGGAACCCAGTaGGTTAGATGCTGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: EERKHPARLLTVCLGVENGPGTQ*VRCCCL
Trigger: CAAGCAGCAGCATCTAACCAACTGGGTTCCTGGCCC...GTTTTCAACTCCAAGGCACACTGTTAATAAACGAGCAGGGTGTTTTCTCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GGTCAACACAGAACTACTACACCTGAAGGCTGGGACTATGCTCTTTGTCCAATATGGAAAGCATCCTGTTaGGGCTCTAATGCCTGTCCC +
Preference number: 5 (lower is better)
Translates to: GQHRTTTPEGWDYALCPIWKASC*GSNACP
Trigger: GGGACAGGCATTAGAGCCCAAACAGGATGCTTTCCA...TATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACCGGGGTCTCATGATGTaGGCTCGTGGGTGCATTCCT +
Preference number: 5 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHRGLMM*ARGCIP
Trigger: AGGAATGCACCCACGAGCCAACATCATGAGACCCCG...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAACGGGGTCTCATGATGTaGGCTCGTGGGTGCATTCCT +
Preference number: 5 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKRGLMM*ARGCIP
Trigger: AGGAATGCACCCACGAGCCAACATCATGAGACCCCG...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATCAGCTCTCTGCTGCGTaGGGCGACCATTTGAGCATT +
Preference number: 5 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHQLSAA*GDHLSI
Trigger: AATGCTCAAATGGTCGCCCAACGCAGCAGAGAGCTG...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAGCTGAAGGCCTGGGTTaGCTGCTGTTGCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: GWDYALCPILQLEKPDILAEGLG*LLLLLL
Trigger: CAACAGCAGCAACAGCAGCAAACCCAGGCCTTCAGC...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GAAGAGAGAAAACACCCTGCTCGTTTATTAACAGTGTGCCTTGGAGTTGAAAACGAGGAGCTTGTGGCATaGTGGGTCCTGCCAAAAGCC +
Preference number: 5 (lower is better)
Translates to: EERKHPARLLTVCLGVENEELVA*WVLPKA
Trigger: GGCTTTTGGCAGGACCCACAATGCCACAAGCTCCTC...GTTTTCAACTCCAAGGCACACTGTTAATAAACGAGCAGGGTGTTTTCTCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGGGGAGGGACCCATTCTaGACGACATCATTGCATTGG +
Preference number: 5 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRGRDPF*TTSLHW
Trigger: CCAATGCAATGATGTCGTCAAGAATGGGTCCCTCCC...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTGCAGCCTGCGGGTGTaGCATCATGGGATTCTGGGA +
Preference number: 5 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHCSLRV*HHGILG
Trigger: TCCCAGAATCCCATGATGCAACACCCGCAGGCTGCA...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 90 bp GCTTCTGCAGTAATCTTGGCTACCTCAGCTGGTGAATTCCCATTCTaGAGCAACTTGTGCAAAATCCGGTGCTTCTCTTGTAACAGTGAC +
Preference number: 5 (lower is better)
Translates to: ASAVILATSAGEFPF*SNLCKIRCFSCNSD
Trigger: GTCACTGTTACAAGAGAAGCACCGGATTTTGCACAAGTTGCTGCAGAATGGGAATTCACCAGCTGAGGTAGCCAAGATTACTGCAGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGACTGCAGGTAAGACCTaGTCCTGGAGTATCACATGG +
Preference number: 5 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRTAGKT*SWSITW
Trigger: CCATGTGATACTCCAGGACAAGGTCTTACCTGCAGT...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GGTCAACACAGAACTACTACACCTGAAGGCTGGGACTATGCTCTTTGTCCAATAACTGCAGGTAAGACCTaGTCCTGGAGTATCACATGG +
Preference number: 5 (lower is better)
Translates to: GQHRTTTPEGWDYALCPITAGKT*SWSITW
Trigger: CCATGTGATACTCCAGGACAAGGTCTTACCTGCAGT...TATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGGATGTGAGGCTATCTTaGGACTCCCACGATTACGAG +
Preference number: 5 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRDVRLS*DSHDYE
Trigger: CTCGTAATCGTGGGAGTCCAAAGATAGCCTCACATC...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GGTCAACACAGAACTACTACACCTGAAGGCTGGGACTATGCTCTTTGTCCAATAGGAGAGTTATCCAATTaGGGGCCTGGTGATGACAGA +
Preference number: 5 (lower is better)
Translates to: GQHRTTTPEGWDYALCPIGELSN*GPGDDR
Trigger: TCTGTCATCACCAGGCCCCAAATTGGATAACTCTCC...TATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGGGAGAGTTATCCAATTaGGGGCCTGGTGATGACAGA +
Preference number: 5 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRGELSN*GPGDDR
Trigger: TCTGTCATCACCAGGCCCCAAATTGGATAACTCTCC...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATTTCCAAAGGACCCCTTaGATTCTCTGCCCCCTCAAC +
Preference number: 5 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHFQRTP*ILCPLN
Trigger: GTTGAGGGGGCAGAGAATCAAAGGGGTCCTTTGGAA...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTTGCCGGCCTTTGAGTTaGGTAAGCCCCAGTCTCCCA +
Preference number: 5 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVCRPLS*VSPSLP
Trigger: TGGGAGACTGGGGCTTACCAAACTCAAAGGCCGGCA...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371997.3
CDS-3UTR CAA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACCATCTGCTGCTGCTGTaGCAATACTGGTCTCGCACC +
Preference number: 5 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYHLLLL*QYWSRT
Trigger: GGTGCGAGACCAGTATTGCAACAGCAGCAGCAGATG...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACGTTAGATGCTGCTGCTaGGCCATAGGGATTAGCCCC +
Preference number: 5 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYVRCCC*AIGISP
Trigger: GGGGCTAATCCCTATGGCCAAGCAGCAGCATCTAAC...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACCCTGTGGCATCTGTGTaGCTGAGAAGAGTGTGCAGC +
Preference number: 5 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYPVASV*LRRVCS
Trigger: GCTGCACACTCTTCTCAGCAACACAGATGCCACAGG...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp CAACTCAACACCATTAGTAAAGGACAATTCAGAATCACCAATTCCACTGGACAAGAAAGCCTCCTTGCATaGGAGGCCCCTGTGCTGGGT +
Preference number: 5 (lower is better)
Translates to: QLNTISKGQFRITNSTGQESLLA*EAPVLG
Trigger: ACCCAGCACAGGGGCCTCCAATGCAAGGAGGCTTTC...TTGTCCAGTGGAATTGGTGATTCTGAATTGTCCTTTACTAATGGTGTTGAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAAAGATGAAAGCCTCCTaGCATTGGAGGCCCCTGTGC +
Preference number: 5 (lower is better)
Translates to: GWDYALCPILQLEKPDILKMKAS*HWRPLC
Trigger: GCACAGGGGCCTCCAATGCAAGGAGGCTTTCATCTT...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACAAGATGAAAGCCTCCTaGCATTGGAGGCCCCTGTGC +
Preference number: 5 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHKMKAS*HWRPLC
Trigger: GCACAGGGGCCTCCAATGCAAGGAGGCTTTCATCTT...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACCAGCTCTCTGCTGCGTaGGGCGACCATTTGAGCATT +
Preference number: 5 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHQLSAA*GDHLSI
Trigger: AATGCTCAAATGGTCGCCCAACGCAGCAGAGAGCTG...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATTGCCGGCCTTTGAGTTaGGTAAGCCCCAGTCTCCTG +
Preference number: 5 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDCRPLS*VSPSLL
Trigger: CAGGAGACTGGGGCTTACCAAACTCAAAGGCCGGCA...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS TCA 90 bp GATTCTCTGCCCCCTCAACACTGCTCTCCTTACTTTCTTTGTCACTaGGGTGATCTCTGCTATTTGACTGACACATTGAACTCTCCACTG +
Preference number: 5 (lower is better)
Translates to: DSLPPQHCSPYFLCH*GDLCYLTDTLNSPL
Trigger: CAGTGGAGAGTTCAATGTGTCAGTCAAATAGCAGAGATCACCTCAGTGACAAAGAAAGTAAGGAGAGCAGTGTTGAGGGGGCAGAGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 90 bp AGCAACTTGTGCAAAATCCGGTGCTTCTCTTGTAACAGTGACCCATaGATATTGGATGTAGAGGATACTCCTCCAGATGTAGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: SNLCKIRCFSCNSDP*ILDVEDTPPDVEEE
Trigger: CTCCTCCTCTACATCTGGAGGAGTATCCTCTACATCCAATATGCATGGGTCACTGTTACAAGAGAAGCACCGGATTTTGCACAAGTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 90 bp ATCTTGGCTACCTCAGCTGGTGAATTCCCATTCTGCAGCAACTTGTaGAAAATCCGGTGCTTCTCTTGTAACAGTGACCCATGCATATTG +
Preference number: 5 (lower is better)
Translates to: ILATSAGEFPFCSNL*KIRCFSCNSDPCIL
Trigger: CAATATGCATGGGTCACTGTTACAAGAGAAGCACCGGATTTTGCACAAGTTGCTGCAGAATGGGAATTCACCAGCTGAGGTAGCCAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CCA 90 bp GTTGCATCCAGCCATAGGTGGTCTAATCCCTTGTCCAACAGGATTTaGGTTTGGTCTATATCCATTCTGTTCTCTCTGAAGGAAGTGGGT +
Preference number: 5 (lower is better)
Translates to: VASSHRWSNPLSNRI*VWSISILFSLKEVG
Trigger: ACCCACTTCCTTCAGAGAGAACAGAATGGATATAGACCAAACCCAAATCCTGTTGGACAAGGGATTAGACCACCTATGGCTGGATGCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAATCTGTAAGCCTTGGTTaGGCGACATACTCATGCCGC +
Preference number: 5 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKSVSLG*ATYSCR
Trigger: GCGGCATGAGTATGTCGCCAAACCAAGGCTTACAGA...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGACTCTCCACTGGATTTaGGTCGCAATAAAAGCCCAG +
Preference number: 5 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRTLHWI*VAIKAQ
Trigger: CTGGGCTTTTATTGCGACCAAAATCCAGTGGAGAGT...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATCCATTCTGCAGCAACTaGTGCAAAATCCGGTGCTTC +
Preference number: 5 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHPFCSN*CKIRCF
Trigger: GAAGCACCGGATTTTGCACAAGTTGCTGCAGAATGG...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGGACTATCCATCATTCTaGGATTCCCACCCAACATGG +
Preference number: 5 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRDYPSF*DSHPTW
Trigger: CCATGTTGGGTGGGAATCCAAGAATGATGGATAGTC...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGCCCAGTCTCCCATACTaGAGCCATAATTTTCCTGAC +
Preference number: 5 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRPSLPY*SHNFPD
Trigger: GTCAGGAAAATTATGGCTCAAGTATGGGAGACTGGG...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371997.3
CDS-3UTR CAA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCCATTCTGCCGGCCTTaGAGTTTGGTAAGCCCCAGT +
Preference number: 5 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVPFCRP*SLVSPS
Trigger: ACTGGGGCTTACCAAACTCAAAGGCCGGCAGAATGG...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGCATCTGCTGCTGCTGTaGCAATACTGGTCTCGCACC +
Preference number: 5 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRHLLLL*QYWSRT
Trigger: GGTGCGAGACCAGTATTGCAACAGCAGCAGCAGATG...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTGTTAGATGCTGCTGCTaGGCCATAGGGATTAGCCCC +
Preference number: 5 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVVRCCC*AIGISP
Trigger: GGGGCTAATCCCTATGGCCAAGCAGCAGCATCTAAC...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTCCTGTGGCATCTGTGTaGCTGAGAAGAGTGTGCAGC +
Preference number: 5 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFPVASV*LRRVCS
Trigger: GCTGCACACTCTTCTCAGCAACACAGATGCCACAGG...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GAAGAGAGAAAACACCCTGCTCGTTTATTAACAGTGTGCCTTGGAGTTGAAAACTGGAAAGCATCCTGTTaGGGCTCTAATGCCTGTCCC +
Preference number: 5 (lower is better)
Translates to: EERKHPARLLTVCLGVENWKASC*GSNACP
Trigger: GGGACAGGCATTAGAGCCCAAACAGGATGCTTTCCA...GTTTTCAACTCCAAGGCACACTGTTAATAAACGAGCAGGGTGTTTTCTCTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTGCTGCTTCTTGGCCTaGGAAAGCATCCTGTTTGGG +
Preference number: 5 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHCCFLA*ESILFG
Trigger: CCCAAACAGGATGCTTTCCAAGGCCAAGAAGCAGCA...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAATCTCTCTTGATGAAAGCCTCCTTGCATaGGAGGCCCCTGTGCTGGGT +
Preference number: 5 (lower is better)
Translates to: ALCPILQLEKPDILISLDESLLA*EAPVLG
Trigger: ACCCAGCACAGGGGCCTCCAATGCAAGGAGGCTTTC...ATCAAGAGAGATTAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATTCGTGGGTGCATTCCTaGGAGAGGAAAATTGCCTTG +
Preference number: 5 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHSWVHS*ERKIAL
Trigger: CAAGGCAATTTTCCTCTCCAAGGAATGCACCCACGA...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp CAACTCAACACCATTAGTAAAGGACAATTCAGAATCACCAATTCCACTGGACAACGGGGTCTCATGATGTaGGCTCGTGGGTGCATTCCT +
Preference number: 5 (lower is better)
Translates to: QLNTISKGQFRITNSTGQRGLMM*ARGCIP
Trigger: AGGAATGCACCCACGAGCCAACATCATGAGACCCCG...TTGTCCAGTGGAATTGGTGATTCTGAATTGTCCTTTACTAATGGTGTTGAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GAAGAGAGAAAACACCCTGCTCGTTTATTAACAGTGTGCCTTGGAGTTGAAAACCAGTCACATTTCGGTTaGGCCCACCCATACTTGAGC +
Preference number: 5 (lower is better)
Translates to: EERKHPARLLTVCLGVENQSHFG*AHPYLS
Trigger: GCTCAAGTATGGGTGGGCCAAACCGAAATGTGACTG...GTTTTCAACTCCAAGGCACACTGTTAATAAACGAGCAGGGTGTTTTCTCTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS TCA 90 bp ATTGCCTTGCTGGTTCATCTGATTCATCATAGAGTTAAAAGATGGTaGTTGTCCCTGAAGATGAAAGCCTCCTTGCATTGGAGGCCCCTG +
Preference number: 5 (lower is better)
Translates to: IALLVHLIHHRVKRW*LSLKMKASLHWRPL
Trigger: CAGGGGCCTCCAATGCAAGGAGGCTTTCATCTTCAGGGACAATCACCATCTTTTAACTCTATGATGAATCAGATGAACCAGCAAGGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 90 bp TCAGCTGGTGAATTCCCATTCTGCAGCAACTTGTGCAAAATCCGGTaGTTCTCTTGTAACAGTGACCCATGCATATTGGATGTAGAGGAT +
Preference number: 5 (lower is better)
Translates to: SAGEFPFCSNLCKIR*FSCNSDPCILDVED
Trigger: ATCCTCTACATCCAATATGCATGGGTCACTGTTACAAGAGAAGCACCGGATTTTGCACAAGTTGCTGCAGAATGGGAATTCACCAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTTCTGTAAGCCTTGGTTaGGCGACATACTCATGCCGC +
Preference number: 5 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVSVSLG*ATYSCR
Trigger: GCGGCATGAGTATGTCGCCAAACCAAGGCTTACAGA...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTGTGGTTCCCAGTATaGCCAGAAGATGCCATGGGA +
Preference number: 5 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVLWFPV*PEDAMG
Trigger: TCCCATGGCATCTTCTGGCAATACTGGGAACCACAG...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GAAGAGAGAAAACACCCTGCTCGTTTATTAACAGTGTGCCTTGGAGTTGAAAACGGAGAGTTATCCAATTaGGGGCCTGGTGATGACAGA +
Preference number: 5 (lower is better)
Translates to: EERKHPARLLTVCLGVENGELSN*GPGDDR
Trigger: TCTGTCATCACCAGGCCCCAAATTGGATAACTCTCC...GTTTTCAACTCCAAGGCACACTGTTAATAAACGAGCAGGGTGTTTTCTCTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGAGTGACCCATGCATATaGGATGTAGAGGATACTCCT +
Preference number: 5 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRSDPCI*DVEDTP
Trigger: AGGAGTATCCTCTACATCCAATATGCATGGGTCACT...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAGCTTCTGCAGTAATCTaGGCTACCTCAGCTGGTGAA +
Preference number: 5 (lower is better)
Translates to: GWDYALCPILQLEKPDILASAVI*ATSAGE
Trigger: TTCACCAGCTGAGGTAGCCAAGATTACTGCAGAAGC...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGCTTAGCTGCTCCTGCTaGACAACATTTCCGTCCCCA +
Preference number: 5 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRLSCSC*TTFPSP
Trigger: TGGGGACGGAAATGTTGTCAAGCAGGAGCAGCTAAG...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATCTTAGCTGCTCCTGCTaGACAACATTTCCGTCCCCA +
Preference number: 5 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDLSCSC*TTFPSP
Trigger: TGGGGACGGAAATGTTGTCAAGCAGGAGCAGCTAAG...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GAAGAGAGAAAACACCCTGCTCGTTTATTAACAGTGTGCCTTGGAGTTGAAAACCCAACATGGGTTGCTTaGGTAACATGGGGAAAGCAC +
Preference number: 5 (lower is better)
Translates to: EERKHPARLLTVCLGVENPTWVA*VTWGKH
Trigger: GTGCTTTCCCCATGTTACCAAAGCAACCCATGTTGG...GTTTTCAACTCCAAGGCACACTGTTAATAAACGAGCAGGGTGTTTTCTCTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACTCGTGGGTGCATTCCTaGGAGAGGAAAATTGCCTTG +
Preference number: 5 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYSWVHS*ERKIAL
Trigger: CAAGGCAATTTTCCTCTCCAAGGAATGCACCCACGA...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAATCGTGGGTGCATTCCTaGGAGAGGAAAATTGCCTTG +
Preference number: 5 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKSWVHS*ERKIAL
Trigger: CAAGGCAATTTTCCTCTCCAAGGAATGCACCCACGA...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTTGCATTCTAAGTTGCTaGGGGGTGTTTGTCCGGGGT +
Preference number: 5 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVCILSC*GVFVRG
Trigger: ACCCCGGACAAACACCCCCAAGCAACTTAGAATGCA...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGTGCATTCTAAGTTGCTaGGGGGTGTTTGTCCGGGGT +
Preference number: 5 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRCILSC*GVFVRG
Trigger: ACCCCGGACAAACACCCCCAAGCAACTTAGAATGCA...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACGCGTTGGGCGACCATTaGAGCATTAAGAAAACCCTG +
Preference number: 5 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYALGDH*SIKKTL
Trigger: CAGGGTTTTCTTAATGCTCAAATGGTCGCCCAACGC...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GAAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATCTTTCTTAGATGCTGAAGGCCTGGGTTaGCTGCTGTTGCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: EKHRPLQWKFSDLQSFLDAEGLG*LLLLLL
Trigger: CAACAGCAGCAACAGCAGCAAACCCAGGCCTTCAGC...ATCTAAGAAAGATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp TTAGCATGTGAAAAGTTTGCTACTGCTGCGATTAAATACTGTCATCTCATTTCCGCTGAAGGCCTGGGTTaGCTGCTGTTGCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: LACEKFATAAIKYCHLISAEGLG*LLLLLL
Trigger: CAACAGCAGCAACAGCAGCAAACCCAGGCCTTCAGC...GGAAATGAGATGACAGTATTTAATCGCAGCAGTAGCAAACTTTTCACATGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACGACGACATCATTGCATaGGGAGGACTAGACACTCGA +
Preference number: 5 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHDDIIA*GGLDTR
Trigger: TCGAGTGTCTAGTCCTCCCAATGCAATGATGTCGTC...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTGGGAGGGACCCATTCTaGACGACATCATTGCATTGG +
Preference number: 5 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVGRDPF*TTSLHW
Trigger: CCAATGCAATGATGTCGTCAAGAATGGGTCCCTCCC...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTGGGAGGGACCCATTCTaGACGACATCATTGCATTGG +
Preference number: 5 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFGRDPF*TTSLHW
Trigger: CCAATGCAATGATGTCGTCAAGAATGGGTCCCTCCC...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GAAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATCTTTCTTAGATTGCAGCCTGCGGGTGTaGCATCATGGGATTCTGGGA +
Preference number: 5 (lower is better)
Translates to: EKHRPLQWKFSDLQSFLDCSLRV*HHGILG
Trigger: TCCCAGAATCCCATGATGCAACACCCGCAGGCTGCA...ATCTAAGAAAGATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 90 bp TTGGCAGATATCAGCTCAGCCAATTCTTCAATATATTTACTTTCCTaGTCCCGTCTCCGTTTTTCACCACTGCAGGTAAGACCTTGTCCT +
Preference number: 5 (lower is better)
Translates to: LADISSANSSIYLLS*SRLRFSPLQVRPCP
Trigger: AGGACAAGGTCTTACCTGCAGTGGTGAAAAACGGAGACGGGAGCAGGAAAGTAAATATATTGAAGAATTGGCTGAGCTGATATCTGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CCA 90 bp CTGTGCAGTCACTATAGTTCCATCAGCCAACGAGAATCGATATACTaGGGTTTCTGCATGGCCATTAAGATAAGCTTCTTGATAGTGACG +
Preference number: 5 (lower is better)
Translates to: LCSHYSSISQRESIY*GFCMAIKISFLIVT
Trigger: CGTCACTATCAAGAAGCTTATCTTAATGGCCATGCAGAAACCCCAGTATATCGATTCTCGTTGGCTGATGGAACTATAGTGACTGCACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCATCCAGCAAGTATTTaGATCCTCCCGCCGCCATTT +
Preference number: 5 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVHPASI*ILPPPF
Trigger: AAATGGCGGCGGGAGGATCAAAATACTTGCTGGATG...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAAACTGCAGGTAAGACCTaGTCCTGGAGTATCACATGG +
Preference number: 5 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQETAGKT*SWSITW
Trigger: CCATGTGATACTCCAGGACAAGGTCTTACCTGCAGT...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GGTCAACACAGAACTACTACACCTGAAGGCTGGGACTATGCTCTTTGTCCAATATCAATATCACTAAGATaGGCAGATATCAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: GQHRTTTPEGWDYALCPISISLR*ADISSA
Trigger: GGCTGAGCTGATATCTGCCAATCTTAGTGATATTGA...TATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGTCAATATCACTAAGATaGGCAGATATCAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRSISLR*ADISSA
Trigger: GGCTGAGCTGATATCTGCCAATCTTAGTGATATTGA...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGACAGATCATACAAGATaGCAAATCTTCCCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRTDHTR*QIFPFL
Trigger: GAGGAAGGGGAAGATTTGCAATCTTGTATGATCTGT...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGAGCCATGTCGATCATTaGTTACAGGATTTCGGAAGA +
Preference number: 5 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRSHVDH*LQDFGR
Trigger: TCTTCCGAAATCCTGTAACAAATGATCGACATGGCT...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GGTCAACACAGAACTACTACACCTGAAGGCTGGGACTATGCTCTTTGTCCAATAAGCCATGTCGATCATTaGTTACAGGATTTCGGAAGA +
Preference number: 5 (lower is better)
Translates to: GQHRTTTPEGWDYALCPISHVDH*LQDFGR
Trigger: TCTTCCGAAATCCTGTAACAAATGATCGACATGGCT...TATTGGACAAAGAGCATAGTCCCAGCCTTCAGGTGTAGTAGTTCTGTGTTGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACAGGTGGTCTAATCCCTaGTCCAACAGGATTTGGGTT +
Preference number: 5 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYRWSNP*SNRIWV
Trigger: AACCCAAATCCTGTTGGACAAGGGATTAGACCACCT...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp CAACTCAACACCATTAGTAAAGGACAATTCAGAATCACCAATTCCACTGGACAATCTGTAAGCCTTGGTTaGGCGACATACTCATGCCGC +
Preference number: 5 (lower is better)
Translates to: QLNTISKGQFRITNSTGQSVSLG*ATYSCR
Trigger: GCGGCATGAGTATGTCGCCAAACCAAGGCTTACAGA...TTGTCCAGTGGAATTGGTGATTCTGAATTGTCCTTTACTAATGGTGTTGAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAAGATGTGAGGCTATCTTaGGACTCCCACGATTACGAG +
Preference number: 5 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQEDVRLS*DSHDYE
Trigger: CTCGTAATCGTGGGAGTCCAAAGATAGCCTCACATC...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACACTCTCCACTGGATTTaGGTCGCAATAAAAGCCCAG +
Preference number: 5 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYTLHWI*VAIKAQ
Trigger: CTGGGCTTTTATTGCGACCAAAATCCAGTGGAGAGT...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGGGTGATCTCTGCTATTaGACTGACACATTGAACTCT +
Preference number: 5 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRGDLCY*TDTLNS
Trigger: AGAGTTCAATGTGTCAGTCAAATAGCAGAGATCACC...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCCATTCTGCAGCAACTaGTGCAAAATCCGGTGCTTC +
Preference number: 5 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVPFCSN*CKIRCF
Trigger: GAAGCACCGGATTTTGCACAAGTTGCTGCAGAATGG...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATGCTTCTGCAGTAATCTaGGCTACCTCAGCTGGTGAA +
Preference number: 5 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDASAVI*ATSAGE
Trigger: TTCACCAGCTGAGGTAGCCAAGATTACTGCAGAAGC...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGGCTTCTGCAGTAATCTaGGCTACCTCAGCTGGTGAA +
Preference number: 5 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRASAVI*ATSAGE
Trigger: TTCACCAGCTGAGGTAGCCAAGATTACTGCAGAAGC...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCCAACATGGGTTGCTTaGGTAACATGGGGAAAGCAC +
Preference number: 5 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVPTWVA*VTWGKH
Trigger: GTGCTTTCCCCATGTTACCAAAGCAACCCATGTTGG...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp TTAGCATGTGAAAAGTTTGCTACTGCTGCGATTAAATACTGTCATCTCATTTCCCATCTGCTGCTGCTGTaGCAATACTGGTCTCGCACC +
Preference number: 5 (lower is better)
Translates to: LACEKFATAAIKYCHLISHLLLL*QYWSRT
Trigger: GGTGCGAGACCAGTATTGCAACAGCAGCAGCAGATG...GGAAATGAGATGACAGTATTTAATCGCAGCAGTAGCAAACTTTTCACATGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp CAACTCAACACCATTAGTAAAGGACAATTCAGAATCACCAATTCCACTGGACAATTCACCAGGCCTCATTaGAAGCATCTGCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: QLNTISKGQFRITNSTGQFTRPH*KHLLLL
Trigger: CAGCAGCAGCAGATGCTTCAAATGAGGCCTGGTGAA...TTGTCCAGTGGAATTGGTGATTCTGAATTGTCCTTTACTAATGGTGTTGAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAAGTGCCATGAGAAACTaGTTCCATGGACAACATGCC +
Preference number: 5 (lower is better)
Translates to: GWDYALCPILQLEKPDILSAMRN*FHGQHA
Trigger: GGCATGTTGTCCATGGAACAAGTTTCTCATGGCACT...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GAAGAGAGAAAACACCCTGCTCGTTTATTAACAGTGTGCCTTGGAGTTGAAAACAGTGCCATGAGAAACTaGTTCCATGGACAACATGCC +
Preference number: 5 (lower is better)
Translates to: EERKHPARLLTVCLGVENSAMRN*FHGQHA
Trigger: GGCATGTTGTCCATGGAACAAGTTTCTCATGGCACT...GTTTTCAACTCCAAGGCACACTGTTAATAAACGAGCAGGGTGTTTTCTCTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp CAACTCAACACCATTAGTAAAGGACAATTCAGAATCACCAATTCCACTGGACAATGGAAAGCATCCTGTTaGGGCTCTAATGCCTGTCCC +
Preference number: 5 (lower is better)
Translates to: QLNTISKGQFRITNSTGQWKASC*GSNACP
Trigger: GGGACAGGCATTAGAGCCCAAACAGGATGCTTTCCA...TTGTCCAGTGGAATTGGTGATTCTGAATTGTCCTTTACTAATGGTGTTGAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GAAGAGAGAAAACACCCTGCTCGTTTATTAACAGTGTGCCTTGGAGTTGAAAACTTGATATGGAAACTGTaGCGGAGGAGCTTGTGGCAT +
Preference number: 5 (lower is better)
Translates to: EERKHPARLLTVCLGVENLIWKL*RRSLWH
Trigger: ATGCCACAAGCTCCTCCGCAACAGTTTCCATATCAA...GTTTTCAACTCCAAGGCACACTGTTAATAAACGAGCAGGGTGTTTTCTCTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GAAGAGAGAAAACACCCTGCTCGTTTATTAACAGTGTGCCTTGGAGTTGAAAACGGCTGGATCTGGTTGTaGTCCCATTCCATAATTTGG +
Preference number: 5 (lower is better)
Translates to: EERKHPARLLTVCLGVENGWIWL*SHSIIW
Trigger: CCAAATTATGGAATGGGACAACAACCAGATCCAGCC...GTTTTCAACTCCAAGGCACACTGTTAATAAACGAGCAGGGTGTTTTCTCTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAGGCTGGATCTGGTTGTaGTCCCATTCCATAATTTGG +
Preference number: 5 (lower is better)
Translates to: GWDYALCPILQLEKPDILGWIWL*SHSIIW
Trigger: CCAAATTATGGAATGGGACAACAACCAGATCCAGCC...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGGACGACATCATTGCATaGGGAGGACTAGACACTCGA +
Preference number: 5 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRDDIIA*GGLDTR
Trigger: TCGAGTGTCTAGTCCTCCCAATGCAATGATGTCGTC...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATCTGGGACTATGCTCTTaGTCCAATACTGCAACTAGA +
Preference number: 5 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHLGLCS*SNTATR
Trigger: TCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAG...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCTTCCTCTGTCTCCAAACAGGATGCAGTACCTGGCCTaGGGTTTTCAGAAGTTTATT +
Preference number: 5 (lower is better)
Translates to: IELKKRQTDLVLPLSPNRMQYLA*GFQKFI
Trigger: AATAAACTTCTGAAAACCCAAGGCCAGGTACTGCAT...CCTGTTTGGAGACAGAGGAAGAACCAGGTCAGTCTGTCTCTTTTTCAGCTCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS TCA 90 bp CTAACCAGTCAAAGGATGTTCAAGCAGTTTATTTTTATTGGTCTCTaGGTCCACCATCCAGCAAGTATTTTGATCCTCCCGCCGCCATTT +
Preference number: 5 (lower is better)
Translates to: LTSQRMFKQFIFIGL*VHHPASILILPPPF
Trigger: AAATGGCGGCGGGAGGATCAAAATACTTGCTGGATGGTGGACTCAGAGACCAATAAAAATAAACTGCTTGAACATCCTTTGACTGGTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CCA 90 bp CTGTGCAGTCACTATAGTTCCATCAGCCAACGAGAATCGATATACTaGGGTTTCTGCATGGCCATTAAGATAAGCTGTTGGGGAAAATAT +
Preference number: 5 (lower is better)
Translates to: LCSHYSSISQRESIY*GFCMAIKISCWGKY
Trigger: ATATTTTCCCCAACAGCTTATCTTAATGGCCATGCAGAAACCCCAGTATATCGATTCTCGTTGGCTGATGGAACTATAGTGACTGCACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371997.3
CDS-3UTR CAA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGCCTAATCCACTCATCTaGAATATACATCAGCAACTG +
Preference number: 5 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRPNPLI*NIHQQL
Trigger: CAGTTGCTGATGTATATTCAAGATGAGTGGATTAGG...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTTACTCGTAAGCATGTATCACATGGCAATTaGCGTTTTCGTGAATCACTG +
Preference number: 5 (lower is better)
Translates to: IHSGGGSGNNQDSLTRKHVSHGN*RFRESL
Trigger: CAGTGATTCACGAAAACGCAAATTGCCATGTGATAC...ATGCTTACGAGTAAGTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GAAGAGAGAAAACACCCTGCTCGTTTATTAACAGTGTGCCTTGGAGTTGAAAACGGATTTCGGAAGAGTTaGCTTTTTGTCTGTGCAGTC +
Preference number: 5 (lower is better)
Translates to: EERKHPARLLTVCLGVENGFRKS*LFVCAV
Trigger: GACTGCACAGACAAAAAGCAAACTCTTCCGAAATCC...GTTTTCAACTCCAAGGCACACTGTTAATAAACGAGCAGGGTGTTTTCTCTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAGGATTTCGGAAGAGTTaGCTTTTTGTCTGTGCAGTC +
Preference number: 5 (lower is better)
Translates to: GWDYALCPILQLEKPDILGFRKS*LFVCAV
Trigger: GACTGCACAGACAAAAAGCAAACTCTTCCGAAATCC...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATAGGTGGTCTAATCCCTaGTCCAACAGGATTTGGGTT +
Preference number: 5 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDRWSNP*SNRIWV
Trigger: AACCCAAATCCTGTTGGACAAGGGATTAGACCACCT...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp CAACTCAACACCATTAGTAAAGGACAATTCAGAATCACCAATTCCACTGGACAAGATGTGAGGCTATCTTaGGACTCCCACGATTACGAG +
Preference number: 5 (lower is better)
Translates to: QLNTISKGQFRITNSTGQDVRLS*DSHDYE
Trigger: CTCGTAATCGTGGGAGTCCAAAGATAGCCTCACATC...TTGTCCAGTGGAATTGGTGATTCTGAATTGTCCTTTACTAATGGTGTTGAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GAAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATCTTTCTTAGATCTGTGGTTCCCAGTATaGCCAGAAGATGCCATGGGA +
Preference number: 5 (lower is better)
Translates to: EKHRPLQWKFSDLQSFLDLWFPV*PEDAMG
Trigger: TCCCATGGCATCTTCTGGCAATACTGGGAACCACAG...ATCTAAGAAAGATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp TTAGCATGTGAAAAGTTTGCTACTGCTGCGATTAAATACTGTCATCTCATTTCCCTGTGGTTCCCAGTATaGCCAGAAGATGCCATGGGA +
Preference number: 5 (lower is better)
Translates to: LACEKFATAAIKYCHLISLWFPV*PEDAMG
Trigger: TCCCATGGCATCTTCTGGCAATACTGGGAACCACAG...GGAAATGAGATGACAGTATTTAATCGCAGCAGTAGCAAACTTTTCACATGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTACTCTCCACTGGATTTaGGTCGCAATAAAAGCCCAG +
Preference number: 5 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVTLHWI*VAIKAQ
Trigger: CTGGGCTTTTATTGCGACCAAAATCCAGTGGAGAGT...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp TTAGCATGTGAAAAGTTTGCTACTGCTGCGATTAAATACTGTCATCTCATTTCCTTCCAAAGGACCCCTTaGATTCTCTGCCCCCTCAAC +
Preference number: 5 (lower is better)
Translates to: LACEKFATAAIKYCHLISFQRTP*ILCPLN
Trigger: GTTGAGGGGGCAGAGAATCAAAGGGGTCCTTTGGAA...GGAAATGAGATGACAGTATTTAATCGCAGCAGTAGCAAACTTTTCACATGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAAAGTGACCCATGCATATaGGATGTAGAGGATACTCCT +
Preference number: 5 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKSDPCI*DVEDTP
Trigger: AGGAGTATCCTCTACATCCAATATGCATGGGTCACT...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACAGTGACCCATGCATATaGGATGTAGAGGATACTCCT +
Preference number: 5 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYSDPCI*DVEDTP
Trigger: AGGAGTATCCTCTACATCCAATATGCATGGGTCACT...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp TTAGCATGTGAAAAGTTTGCTACTGCTGCGATTAAATACTGTCATCTCATTTCCTTCACCAGGCCTCATTaGAAGCATCTGCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LACEKFATAAIKYCHLISFTRPH*KHLLLL
Trigger: CAGCAGCAGCAGATGCTTCAAATGAGGCCTGGTGAA...GGAAATGAGATGACAGTATTTAATCGCAGCAGTAGCAAACTTTTCACATGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGAGTGCCATGAGAAACTaGTTCCATGGACAACATGCC +
Preference number: 5 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRSAMRN*FHGQHA
Trigger: GGCATGTTGTCCATGGAACAAGTTTCTCATGGCACT...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GAAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATCTTTCTTAGATTGCTGCTTCTTGGCCTaGGAAAGCATCCTGTTTGGG +
Preference number: 5 (lower is better)
Translates to: EKHRPLQWKFSDLQSFLDCCFLA*ESILFG
Trigger: CCCAAACAGGATGCTTTCCAAGGCCAAGAAGCAGCA...ATCTAAGAAAGATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp TTAGCATGTGAAAAGTTTGCTACTGCTGCGATTAAATACTGTCATCTCATTTCCTGCTGCTTCTTGGCCTaGGAAAGCATCCTGTTTGGG +
Preference number: 5 (lower is better)
Translates to: LACEKFATAAIKYCHLISCCFLA*ESILFG
Trigger: CCCAAACAGGATGCTTTCCAAGGCCAAGAAGCAGCA...GGAAATGAGATGACAGTATTTAATCGCAGCAGTAGCAAACTTTTCACATGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAATCTCTCTTGATTGCATTCTAAGTTGCTaGGGGGTGTTTGTCCGGGGT +
Preference number: 5 (lower is better)
Translates to: ALCPILQLEKPDILISLDCILSC*GVFVRG
Trigger: ACCCCGGACAAACACCCCCAAGCAACTTAGAATGCA...ATCAAGAGAGATTAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp CAACTCAACACCATTAGTAAAGGACAATTCAGAATCACCAATTCCACTGGACAAGCGTTGGGCGACCATTaGAGCATTAAGAAAACCCTG +
Preference number: 5 (lower is better)
Translates to: QLNTISKGQFRITNSTGQALGDH*SIKKTL
Trigger: CAGGGTTTTCTTAATGCTCAAATGGTCGCCCAACGC...TTGTCCAGTGGAATTGGTGATTCTGAATTGTCCTTTACTAATGGTGTTGAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTTTGATATGGAAACTGTaGCGGAGGAGCTTGTGGCAT +
Preference number: 5 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVLIWKL*RRSLWH
Trigger: ATGCCACAAGCTCCTCCGCAACAGTTTCCATATCAA...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATTTGATATGGAAACTGTaGCGGAGGAGCTTGTGGCAT +
Preference number: 5 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDLIWKL*RRSLWH
Trigger: ATGCCACAAGCTCCTCCGCAACAGTTTCCATATCAA...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACCTGGGACTATGCTCTTaGTCCAATACTGCAACTAGA +
Preference number: 5 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHLGLCS*SNTATR
Trigger: TCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAG...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GAAGAGAGAAAACACCCTGCTCGTTTATTAACAGTGTGCCTTGGAGTTGAAAACTTTCTGCAAAGCCATTaGGACATCCATGACAGTTCC +
Preference number: 5 (lower is better)
Translates to: EERKHPARLLTVCLGVENFLQSH*DIHDSS
Trigger: GGAACTGTCATGGATGTCCAAATGGCTTTGCAGAAA...GTTTTCAACTCCAAGGCACACTGTTAATAAACGAGCAGGGTGTTTTCTCTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACCACACAGCCCATGAATaGCTATTATTTCGGACTGCT +
Preference number: 5 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHHTAHE*LLFRTA
Trigger: AGCAGTCCGAAATAATAGCAATTCATGGGCTGTGTG...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GAAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATCTTTCTTAGATCAGTCACATTTCGGTTaGGCCCACCCATACTTGAGC +
Preference number: 5 (lower is better)
Translates to: EKHRPLQWKFSDLQSFLDQSHFG*AHPYLS
Trigger: GCTCAAGTATGGGTGGGCCAAACCGAAATGTGACTG...ATCTAAGAAAGATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGCAGTGTGCCTTGGAGTaGAAAACAATAAATCAATCC +
Preference number: 5 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRQCALE*KTINQS
Trigger: GGATTGATTTATTGTTTTCAACTCCAAGGCACACTG...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAATCTCTCTTGATCATCCAGCAAGTATTTaGATCCTCCCGCCGCCATTT +
Preference number: 5 (lower is better)
Translates to: ALCPILQLEKPDILISLDHPASI*ILPPPF
Trigger: AAATGGCGGCGGGAGGATCAAAATACTTGCTGGATG...ATCAAGAGAGATTAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTATCAATATCACTAAGATaGGCAGATATCAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: GWDYALCPILQLEKPDILSISLR*ADISSA
Trigger: GGCTGAGCTGATATCTGCCAATCTTAGTGATATTGA...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAACAGATCATACAAGATaGCAAATCTTCCCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: GWDYALCPILQLEKPDILTDHTR*QIFPFL
Trigger: GAGGAAGGGGAAGATTTGCAATCTTGTATGATCTGT...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp CAACTCAACACCATTAGTAAAGGACAATTCAGAATCACCAATTCCACTGGACAAAGGTGGTCTAATCCCTaGTCCAACAGGATTTGGGTT +
Preference number: 5 (lower is better)
Translates to: QLNTISKGQFRITNSTGQRWSNP*SNRIWV
Trigger: AACCCAAATCCTGTTGGACAAGGGATTAGACCACCT...TTGTCCAGTGGAATTGGTGATTCTGAATTGTCCTTTACTAATGGTGTTGAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GACACCAGAAACCACACCAAGGATTCTACTCGAGATCTCAATATGGGATTCAGGTATTTGACTGACACATaGAACTCTCCACTGGATTTT +
Preference number: 5 (lower is better)
Translates to: DTRNHTKDSTRDLNMGFRYLTDT*NSPLDF
Trigger: AAAATCCAGTGGAGAGTTCAATGTGTCAGTCAAATA...CCTGAATCCCATATTGAGATCTCGAGTAGAATCCTTGGTGTGGTTTCTGGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp TTAGCATGTGAAAAGTTTGCTACTGCTGCGATTAAATACTGTCATCTCATTTCCCCATTCTGCAGCAACTaGTGCAAAATCCGGTGCTTC +
Preference number: 5 (lower is better)
Translates to: LACEKFATAAIKYCHLISPFCSN*CKIRCF
Trigger: GAAGCACCGGATTTTGCACAAGTTGCTGCAGAATGG...GGAAATGAGATGACAGTATTTAATCGCAGCAGTAGCAAACTTTTCACATGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAATCTCTCTTGATCCAACATGGGTTGCTTaGGTAACATGGGGAAAGCAC +
Preference number: 5 (lower is better)
Translates to: ALCPILQLEKPDILISLDPTWVA*VTWGKH
Trigger: GTGCTTTCCCCATGTTACCAAAGCAACCCATGTTGG...ATCAAGAGAGATTAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp CAACTCAACACCATTAGTAAAGGACAATTCAGAATCACCAATTCCACTGGACAAGACTATCCATCATTCTaGGATTCCCACCCAACATGG +
Preference number: 5 (lower is better)
Translates to: QLNTISKGQFRITNSTGQDYPSF*DSHPTW
Trigger: CCATGTTGGGTGGGAATCCAAGAATGATGGATAGTC...TTGTCCAGTGGAATTGGTGATTCTGAATTGTCCTTTACTAATGGTGTTGAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACAAGAAGAGGCCTATTTaGAGTGCCATGAGAAACTTG +
Preference number: 5 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHKKRPI*SAMRNL
Trigger: CAAGTTTCTCATGGCACTCAAAATAGGCCTCTTCTT...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAAGAGAGGAAAATTGCCTaGCTGGTTCATCTGATTCAT +
Preference number: 5 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKERKIA*LVHLIH
Trigger: ATGAATCAGATGAACCAGCAAGGCAATTTTCCTCTC...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GAAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATCTTTCTTAGATGCGTTGGGCGACCATTaGAGCATTAAGAAAACCCTG +
Preference number: 5 (lower is better)
Translates to: EKHRPLQWKFSDLQSFLDALGDH*SIKKTL
Trigger: CAGGGTTTTCTTAATGCTCAAATGGTCGCCCAACGC...ATCTAAGAAAGATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACTCACTTAAAATACCCTaGATGGAGCTCAAAGCTGGT +
Preference number: 5 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYSLKIP*MELKAG
Trigger: ACCAGCTTTGAGCTCCATCAAGGGTATTTTAAGTGA...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAAATGCAGTACCTGGCCTaGGGTTTTCAGAAGTTTATT +
Preference number: 5 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKMQYLA*GFQKFI
Trigger: AATAAACTTCTGAAAACCCAAGGCCAGGTACTGCAT...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATCACACAGCCCATGAATaGCTATTATTTCGGACTGCT +
Preference number: 5 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDHTAHE*LLFRTA
Trigger: AGCAGTCCGAAATAATAGCAATTCATGGGCTGTGTG...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 90 bp TCGATCATTTGTTACAGGATTTCGGAAGAGTTTGCTTTTTGTCTGTaGAGTCACTATAGTTCCATCAGCCAACGAGAATCGATATACTGG +
Preference number: 5 (lower is better)
Translates to: SIICYRISEEFAFCL*SHYSSISQRESIYW
Trigger: CCAGTATATCGATTCTCGTTGGCTGATGGAACTATAGTGACTGCACAGACAAAAAGCAAACTCTTCCGAAATCCTGTAACAAATGATCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CCA 90 bp GAATCGATATACTGGGGTTTCTGCATGGCCATTAAGATAAGCTGTTaGGGAAAATATCCCATCACTGGTAACTTCTTGATAGTGACGTTT +
Preference number: 5 (lower is better)
Translates to: ESIYWGFCMAIKISC*GKYPITGNFLIVTF
Trigger: AAACGTCACTATCAAGAAGTTACCAGTGATGGGATATTTTCCCCAACAGCTTATCTTAATGGCCATGCAGAAACCCCAGTATATCGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371997.3
CDS CCA 90 bp ATAAAAGCCCAGAGGACTCTTGGAATCCTGATTGCTTACTTTACTTaGTTGGGTAATATTCATATTGGGAGAGTTATCCAATTTGGGGCC +
Preference number: 5 (lower is better)
Translates to: IKAQRTLGILIAYFT*LGNIHIGRVIQFGA
Trigger: GGCCCCAAATTGGATAACTCTCCCAATATGAATATTACCCAACCAAGTAAAGTAAGCAATCAGGATTCCAAGAGTCCTCTGGGCTTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAAGCAGTTTATTTTTATaGGTCTCTGAGTCCACCATC +
Preference number: 5 (lower is better)
Translates to: GWDYALCPILQLEKPDILSSLFL*VSESTI
Trigger: GATGGTGGACTCAGAGACCAATAAAAATAAACTGCT...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAAAGCAGTTTATTTTTATaGGTCTCTGAGTCCACCATC +
Preference number: 5 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKSSLFL*VSESTI
Trigger: GATGGTGGACTCAGAGACCAATAAAAATAAACTGCT...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GGCTGGGACTATGCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTACCTAATCCACTCATCTaGAATATACATCAGCAACTG +
Preference number: 5 (lower is better)
Translates to: GWDYALCPILQLEKPDILPNPLI*NIHQQL
Trigger: CAGTTGCTGATGTATATTCAAGATGAGTGGATTAGG...TAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTGTATCACATGGCAATTaGCGTTTTCGTGAATCACTG +
Preference number: 5 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFVSHGN*RFRESL
Trigger: CAGTGATTCACGAAAACGCAAATTGCCATGTGATAC...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTGTTAACCAGGTCCTCTaGCTTATATTGCAGGTATTG +
Preference number: 5 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFVNQVL*LILQVL
Trigger: CAATACCTGCAATATAAGCAAGAGGACCTGGTTAAC...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAAAGCCATGTCGATCATTaGTTACAGGATTTCGGAAGA +
Preference number: 5 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQESHVDH*LQDFGR
Trigger: TCTTCCGAAATCCTGTAACAAATGATCGACATGGCT...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAAGGTGATCTCTGCTATTaGACTGACACATTGAACTCT +
Preference number: 5 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQEGDLCY*TDTLNS
Trigger: AGAGTTCAATGTGTCAGTCAAATAGCAGAGATCACC...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GAAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATCTTTCTTAGATGACTATCCATCATTCTaGGATTCCCACCCAACATGG +
Preference number: 5 (lower is better)
Translates to: EKHRPLQWKFSDLQSFLDDYPSF*DSHPTW
Trigger: CCATGTTGGGTGGGAATCCAAGAATGATGGATAGTC...ATCTAAGAAAGATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTAAGAAGAGGCCTATTTaGAGTGCCATGAGAAACTTG +
Preference number: 5 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVKKRPI*SAMRNL
Trigger: CAAGTTTCTCATGGCACTCAAAATAGGCCTCTTCTT...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATGAGAGGAAAATTGCCTaGCTGGTTCATCTGATTCAT +
Preference number: 5 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDERKIA*LVHLIH
Trigger: ATGAATCAGATGAACCAGCAAGGCAATTTTCCTCTC...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGGAGAGGAAAATTGCCTaGCTGGTTCATCTGATTCAT +
Preference number: 5 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRERKIA*LVHLIH
Trigger: ATGAATCAGATGAACCAGCAAGGCAATTTTCCTCTC...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAATCTCTCTTGATGGCTGGATCTGGTTGTaGTCCCATTCCATAATTTGG +
Preference number: 5 (lower is better)
Translates to: ALCPILQLEKPDILISLDGWIWL*SHSIIW
Trigger: CCAAATTATGGAATGGGACAACAACCAGATCCAGCC...ATCAAGAGAGATTAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTTCACTTAAAATACCCTaGATGGAGCTCAAAGCTGGT +
Preference number: 5 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFSLKIP*MELKAG
Trigger: ACCAGCTTTGAGCTCCATCAAGGGTATTTTAAGTGA...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp AAGTGTAGGCAAAAACCAGGAATGTGTTTCACTATTCCCTCAAGACCTCAAGAAATGCAGTACCTGGCCTaGGGTTTTCAGAAGTTTATT +
Preference number: 5 (lower is better)
Translates to: KCRQKPGMCFTIPSRPQEMQYLA*GFQKFI
Trigger: AATAAACTTCTGAAAACCCAAGGCCAGGTACTGCAT...TTCTTGAGGTCTTGAGGGAATAGTGAAACACATTCCTGGTTTTTGCCTACACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATAGCAGTTTATTTTTATaGGTCTCTGAGTCCACCATC +
Preference number: 5 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDSSLFL*VSESTI
Trigger: GATGGTGGACTCAGAGACCAATAAAAATAAACTGCT...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp CAACTCAACACCATTAGTAAAGGACAATTCAGAATCACCAATTCCACTGGACAAGTTAACCAGGTCCTCTaGCTTATATTGCAGGTATTG +
Preference number: 5 (lower is better)
Translates to: QLNTISKGQFRITNSTGQVNQVL*LILQVL
Trigger: CAATACCTGCAATATAAGCAAGAGGACCTGGTTAAC...TTGTCCAGTGGAATTGGTGATTCTGAATTGTCCTTTACTAATGGTGTTGAGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp CAACTCAACACCATTAGTAAAGGACAATTCAGAATCACCAATTCCACTGGACAAATCACTGGTAACTTCTaGATAGTGACGTTTCTGGGA +
Preference number: 5 (lower is better)
Translates to: QLNTISKGQFRITNSTGQITGNF*IVTFLG
Trigger: TCCCAGAAACGTCACTATCAAGAAGTTACCAGTGAT...TTGTCCAGTGGAATTGGTGATTCTGAATTGTCCTTTACTAATGGTGTTGAGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371997.3
CDS-3UTR CAA 90 bp GCTCTTTGTCCAATACTGCAACTAGAGAAACCAGATATTCTAATCTCTCTTGATGGATTTCGGAAGAGTTaGCTTTTTGTCTGTGCAGTC +
Preference number: 5 (lower is better)
Translates to: ALCPILQLEKPDILISLDGFRKS*LFVCAV
Trigger: GACTGCACAGACAAAAAGCAAACTCTTCCGAAATCC...ATCAAGAGAGATTAGAATATCTGGTTTCTCTAGTTGCAGTATTGGACAAAGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACTATTTGACTGACACATaGAACTCTCCACTGGATTTT +
Preference number: 5 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHYLTDT*NSPLDF
Trigger: AAAATCCAGTGGAGAGTTCAATGTGTCAGTCAAATA...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp CAACTCAACACCATTAGTAAAGGACAATTCAGAATCACCAATTCCACTGGACAAGGTGATCTCTGCTATTaGACTGACACATTGAACTCT +
Preference number: 5 (lower is better)
Translates to: QLNTISKGQFRITNSTGQGDLCY*TDTLNS
Trigger: AGAGTTCAATGTGTCAGTCAAATAGCAGAGATCACC...TTGTCCAGTGGAATTGGTGATTCTGAATTGTCCTTTACTAATGGTGTTGAGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACCCAGATGACTACCATTaGAGGATATGGAATTATTGT +
Preference number: 5 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHPDDYH*RIWNYC
Trigger: ACAATAATTCCATATCCTCAAATGGTAGTCATCTGG...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GAAGAGAGAAAACACCCTGCTCGTTTATTAACAGTGTGCCTTGGAGTTGAAAACCCAGATGACTACCATTaGAGGATATGGAATTATTGT +
Preference number: 5 (lower is better)
Translates to: EERKHPARLLTVCLGVENPDDYH*RIWNYC
Trigger: ACAATAATTCCATATCCTCAAATGGTAGTCATCTGG...GTTTTCAACTCCAAGGCACACTGTTAATAAACGAGCAGGGTGTTTTCTCTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGCATTCCATAATTTGGTaGATATGGAAACTGTTGCGG +
Preference number: 5 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRHSIIW*IWKLLR
Trigger: CCGCAACAGTTTCCATATCAACCAAATTATGGAATG...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp CCAAACAGGAGAGTATACTATCTGAAAAGCACAGGCCACTACAATGGAAGTTTTCATTCCATAATTTGGTaGATATGGAAACTGTTGCGG +
Preference number: 5 (lower is better)
Translates to: PNRRVYYLKSTGHYNGSFHSIIW*IWKLLR
Trigger: CCGCAACAGTTTCCATATCAACCAAATTATGGAATG...AAAACTTCCATTGTAGTGGCCTGTGCTTTTCAGATAGTATACTCTCCTGTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp CTTAAAGAAGGGTCAGATACAATTGAGCTGAAAAAGAGACAGACTGACCTGGTTCATTCCATAATTTGGTaGATATGGAAACTGTTGCGG +
Preference number: 5 (lower is better)
Translates to: LKEGSDTIELKKRQTDLVHSIIW*IWKLLR
Trigger: CCGCAACAGTTTCCATATCAACCAAATTATGGAATG...AACCAGGTCAGTCTGTCTCTTTTTCAGCTCAATTGTATCTGACCCTTCTTTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATCAGTAACACTCCATGTCTCCAGAATTATATCCCTAGGAGGTGGAATGCCAAAGTCCCATTCCATAATTaGGTTGATATGGAAACTGTT +
Preference number: 5 (lower is better)
Translates to: ISNTPCLQNYIPRRWNAKVPFHN*VDMETV
Trigger: AACAGTTTCCATATCAACCAAATTATGGAATGGGAC...TTTGGCATTCCACCTCCTAGGGATATAATTCTGGAGACATGGAGTGTTACTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACGTCCCATTCCATAATTaGGTTGATATGGAAACTGTT +
Preference number: 5 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHVPFHN*VDMETV
Trigger: AACAGTTTCCATATCAACCAAATTATGGAATGGGAC...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACGTCCCATTCCATAATTaGGTTGATATGGAAACTGTT +
Preference number: 5 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYVPFHN*VDMETV
Trigger: AACAGTTTCCATATCAACCAAATTATGGAATGGGAC...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GAAAAGCACAGGCCACTACAATGGAAGTTTTCGGATTTACAATCTTTCTTAGATCTGGGACTATGCTCTTaGTCCAATACTGCAACTAGA +
Preference number: 5 (lower is better)
Translates to: EKHRPLQWKFSDLQSFLDLGLCS*SNTATR
Trigger: TCTAGTTGCAGTATTGGACAAAGAGCATAGTCCCAG...ATCTAAGAAAGATTGTAAATCCGAAAACTTCCATTGTAGTGGCCTGTGCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp TTAGCATGTGAAAAGTTTGCTACTGCTGCGATTAAATACTGTCATCTCATTTCCTTTCTGCAAAGCCATTaGGACATCCATGACAGTTCC +
Preference number: 5 (lower is better)
Translates to: LACEKFATAAIKYCHLISFLQSH*DIHDSS
Trigger: GGAACTGTCATGGATGTCCAAATGGCTTTGCAGAAA...GGAAATGAGATGACAGTATTTAATCGCAGCAGTAGCAAACTTTTCACATGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp TTAGCATGTGAAAAGTTTGCTACTGCTGCGATTAAATACTGTCATCTCATTTCCCACACAGCCCATGAATaGCTATTATTTCGGACTGCT +
Preference number: 5 (lower is better)
Translates to: LACEKFATAAIKYCHLISHTAHE*LLFRTA
Trigger: AGCAGTCCGAAATAATAGCAATTCATGGGCTGTGTG...GGAAATGAGATGACAGTATTTAATCGCAGCAGTAGCAAACTTTTCACATGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp TATACTGCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGAGATATATTTTGAACTaGGTAGGGGAAAGAGGGCAA +
Preference number: 5 (lower is better)
Translates to: YTALKIRSTLVVGLEIIRRYILN*VGERGQ
Trigger: TTGCCCTCTTTCCCCTACCAAGTTCAAAATATATCT...CCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGCAGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATAGATATATTTTGAACTaGGTAGGGGAAAGAGGGCAA +
Preference number: 5 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDRYILN*VGERGQ
Trigger: TTGCCCTCTTTCCCCTACCAAGTTCAAAATATATCT...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GATGCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTTGTACATTAAGATAAGCTTCTaGATAGTGACGTTTCTGGGA +
Preference number: 5 (lower is better)
Translates to: DAWNNDSFPIILVQCHLYIKISF*IVTFLG
Trigger: TCCCAGAAACGTCACTATCAAGAAGCTTATCTTAAT...GTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp GCTTTGAAAATAAGATCCACTCTGGTGGTGGGTCTGGAAATAATCAGGATTCACATTAAGATAAGCTTCTaGATAGTGACGTTTCTGGGA +
Preference number: 5 (lower is better)
Translates to: ALKIRSTLVVGLEIIRIHIKISF*IVTFLG
Trigger: TCCCAGAAACGTCACTATCAAGAAGCTTATCTTAAT...GTGAATCCTGATTATTTCCAGACCCACCACCAGAGTGGATCTTATTTTCAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp TTAGCATGTGAAAAGTTTGCTACTGCTGCGATTAAATACTGTCATCTCATTTCCGTATCACATGGCAATTaGCGTTTTCGTGAATCACTG +
Preference number: 5 (lower is better)
Translates to: LACEKFATAAIKYCHLISVSHGN*RFRESL
Trigger: CAGTGATTCACGAAAACGCAAATTGCCATGTGATAC...GGAAATGAGATGACAGTATTTAATCGCAGCAGTAGCAAACTTTTCACATGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp TTAGCATGTGAAAAGTTTGCTACTGCTGCGATTAAATACTGTCATCTCATTTCCGTTAACCAGGTCCTCTaGCTTATATTGCAGGTATTG +
Preference number: 5 (lower is better)
Translates to: LACEKFATAAIKYCHLISVNQVL*LILQVL
Trigger: CAATACCTGCAATATAAGCAAGAGGACCTGGTTAAC...GGAAATGAGATGACAGTATTTAATCGCAGCAGTAGCAAACTTTTCACATGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp TTAGCATGTGAAAAGTTTGCTACTGCTGCGATTAAATACTGTCATCTCATTTCCACAGATCATACAAGATaGCAAATCTTCCCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: LACEKFATAAIKYCHLISTDHTR*QIFPFL
Trigger: GAGGAAGGGGAAGATTTGCAATCTTGTATGATCTGT...GGAAATGAGATGACAGTATTTAATCGCAGCAGTAGCAAACTTTTCACATGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp ATCTCTCTTGATTCTTCCAATGTTCTCTGGCCCACCTACGTGTATTTAAGAGATCCAGATGACTACCATTaGAGGATATGGAATTATTGT +
Preference number: 5 (lower is better)
Translates to: ISLDSSNVLWPTYVYLRDPDDYH*RIWNYC
Trigger: ACAATAATTCCATATCCTCAAATGGTAGTCATCTGG...ATCTCTTAAATACACGTAGGTGGGCCAGAGAACATTGGAAGAATCAAGAGAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp TTAGCATGTGAAAAGTTTGCTACTGCTGCGATTAAATACTGTCATCTCATTTCCAAGAAGAGGCCTATTTaGAGTGCCATGAGAAACTTG +
Preference number: 5 (lower is better)
Translates to: LACEKFATAAIKYCHLISKKRPI*SAMRNL
Trigger: CAAGTTTCTCATGGCACTCAAAATAGGCCTCTTCTT...GGAAATGAGATGACAGTATTTAATCGCAGCAGTAGCAAACTTTTCACATGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp CAACTCAACACCATTAGTAAAGGACAATTCAGAATCACCAATTCCACTGGACAAAGATATATTTTGAACTaGGTAGGGGAAAGAGGGCAA +
Preference number: 5 (lower is better)
Translates to: QLNTISKGQFRITNSTGQRYILN*VGERGQ
Trigger: TTGCCCTCTTTCCCCTACCAAGTTCAAAATATATCT...TTGTCCAGTGGAATTGGTGATTCTGAATTGTCCTTTACTAATGGTGTTGAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp CAACTCAACACCATTAGTAAAGGACAATTCAGAATCACCAATTCCACTGGACAACAGTGTGCCTTGGAGTaGAAAACAATAAATCAATCC +
Preference number: 5 (lower is better)
Translates to: QLNTISKGQFRITNSTGQQCALE*KTINQS
Trigger: GGATTGATTTATTGTTTTCAACTCCAAGGCACACTG...TTGTCCAGTGGAATTGGTGATTCTGAATTGTCCTTTACTAATGGTGTTGAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS-3UTR CAA 90 bp TTAGCATGTGAAAAGTTTGCTACTGCTGCGATTAAATACTGTCATCTCATTTCCCCTAATCCACTCATCTaGAATATACATCAGCAACTG +
Preference number: 5 (lower is better)
Translates to: LACEKFATAAIKYCHLISPNPLI*NIHQQL
Trigger: CAGTTGCTGATGTATATTCAAGATGAGTGGATTAGG...GGAAATGAGATGACAGTATTTAATCGCAGCAGTAGCAAACTTTTCACATGCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 72 bp GCCATCGGGCCAGGAACCCAGTTGGTTAGATGCTGCTaGTTGGCCATAGGGATTAGCCCCCATTCCCATGGG +
Preference number: 6 (lower is better)
Translates to: AIGPGTQLVRCC*LAIGISPHSHG
Trigger: CCCATGGGAATGGGGGCTAATCCCTATGGCCAAGCAGCAGCATCTAACCAACTGGGTTCCTGGCCCGATGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 72 bp TGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTaGTGCTGCATCATCATAGCCACCCTCTGTTGTCGG +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*CCIIIATLCCR
Trigger: CCGACAACAGAGGGTGGCTATGATGATGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 72 bp TGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTaGTGCTGCTGCTGCATCATCATAGCCACCCTCTGT +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*CCCCIIIATLC
Trigger: ACAGAGGGTGGCTATGATGATGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 72 bp GGGCTGAAGGCCTGGGTTTGCTGCTGTTGCTGCTGTTaGTGTTGCTGTTGCTGTTGCTGCTGCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: GLKAWVCCCCCC*CCCCCCCCCCC
Trigger: GCAGCAGCAGCAGCAGCAACAGCAACAGCAACAGCAACAGCAGCAACAGCAGCAAACCCAGGCCTTCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 72 bp GGAGGTGGGCTGAAGGCCTGGGTTTGCTGCTGTTGCTaGTGTTGCTGTTGCTGTTGCTGTTGCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: GGGLKAWVCCCC*CCCCCCCCCCC
Trigger: GCAGCAGCAGCAACAGCAACAGCAACAGCAACAGCAGCAACAGCAGCAAACCCAGGCCTTCAGCCCACCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CCA 72 bp CCCATCCATGCTGGGGGAAGCAGTCACATTAGGAGGTaGGCTGAAGGCCTGGGTTTGCTGCTGTTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: PIHAGGSSHIRR*AEGLGLLLLLL
Trigger: CAGCAGCAACAGCAGCAAACCCAGGCCTTCAGCCCACCTCCTAATGTGACTGCTTCCCCCAGCATGGATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CAA 90 bp AGGTGGGCTGAAGGCCTGGGTTTGCTGCTGTTGCTGCTGTTGCTGTaGCTGTTGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTG +
Preference number: 6 (lower is better)
Translates to: RWAEGLGLLLLLLLL*LLLLLLLLLLLLLL
Trigger: CAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACAGCAACAGCAACAGCAGCAACAGCAGCAAACCCAGGCCTTCAGCCCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CAA 90 bp CTGCCAAGCCATAGGCCCTGCTGCTCGGCATCTGTAAGCCTTGGTTaGGCGACATACTCATGCCGCCTACCGAACTGTTGCATCCAGCCA +
Preference number: 6 (lower is better)
Translates to: LPSHRPCCSASVSLG*ATYSCRLPNCCIQP
Trigger: TGGCTGGATGCAACAGTTCGGTAGGCGGCATGAGTATGTCGCCAAACCAAGGCTTACAGATGCCGAGCAGCAGGGCCTATGGCTTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CAA 90 bp CTGTTGCTGTTGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTaGCTGCTGCTGCTGCTGCTGCATCATCATAGCCACCCTCTGTTG +
Preference number: 6 (lower is better)
Translates to: LLLLLLLLLLLLLLL*LLLLLLHHHSHPLL
Trigger: CAACAGAGGGTGGCTATGATGATGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACAGCAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CAA 90 bp GCTGGGGGAAGCAGTCACATTAGGAGGTGGGCTGAAGGCCTGGGTTaGCTGCTGTTGCTGCTGTTGCTGTTGCTGTTGCTGTTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: AGGSSHIRRWAEGLG*LLLLLLLLLLLLLL
Trigger: CAGCAGCAACAGCAACAGCAACAGCAACAGCAGCAACAGCAGCAAACCCAGGCCTTCAGCCCACCTCCTAATGTGACTGCTTCCCCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 72 bp TGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGCTaGTGCATCATCATAGCCACCCTCTGTTGTCGGAAG +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*CIIIATLCCRK
Trigger: CTTCCGACAACAGAGGGTGGCTATGATGATGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 72 bp TGCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTaGTGCTGCTGCATCATCATAGCCACCCTCTGTTGT +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*CCCIIIATLCC
Trigger: ACAACAGAGGGTGGCTATGATGATGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CAA 72 bp TGGGCTGAAGGCCTGGGTTTGCTGCTGTTGCTGCTGTaGCTGTTGCTGTTGCTGTTGCTGCTGCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: WAEGLGLLLLLL*LLLLLLLLLLL
Trigger: CAGCAGCAGCAGCAGCAACAGCAACAGCAACAGCAACAGCAGCAACAGCAGCAAACCCAGGCCTTCAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CAA 90 bp CAACATGCCATCGGGCCAGGAACCCAGTTGGTTAGATGCTGCTGCTaGGCCATAGGGATTAGCCCCCATTCCCATGGGGATTTCACCAGG +
Preference number: 6 (lower is better)
Translates to: QHAIGPGTQLVRCCC*AIGISPHSHGDFTR
Trigger: CCTGGTGAAATCCCCATGGGAATGGGGGCTAATCCCTATGGCCAAGCAGCAGCATCTAACCAACTGGGTTCCTGGCCCGATGGCATGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 72 bp CATGCCATCGGGCCAGGAACCCAGTTGGTTAGATGCTaGTGCTTGGCCATAGGGATTAGCCCCCATTCCCAT +
Preference number: 6 (lower is better)
Translates to: HAIGPGTQLVRC*CLAIGISPHSH
Trigger: ATGGGAATGGGGGCTAATCCCTATGGCCAAGCAGCAGCATCTAACCAACTGGGTTCCTGGCCCGATGGCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 72 bp CAACATGCCATCGGGCCAGGAACCCAGTTGGTTAGATaGTGCTGCTTGGCCATAGGGATTAGCCCCCATTCC +
Preference number: 6 (lower is better)
Translates to: QHAIGPGTQLVR*CCLAIGISPHS
Trigger: GGAATGGGGGCTAATCCCTATGGCCAAGCAGCAGCATCTAACCAACTGGGTTCCTGGCCCGATGGCATGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 72 bp TTAGGAGGTGGGCTGAAGGCCTGGGTTTGCTGCTGTTaGTGCTGTTGCTGTTGCTGTTGCTGTTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: LGGGLKAWVCCC*CCCCCCCCCCC
Trigger: GCAGCAGCAACAGCAACAGCAACAGCAACAGCAGCAACAGCAGCAAACCCAGGCCTTCAGCCCACCTCCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 72 bp AAACTGTTGCGGAGGAGCTTGTGGCATTGTGGGTCCTaGCAAAAGCCCATCCATGCTGGGGGAAGCAGTCAC +
Preference number: 6 (lower is better)
Translates to: KLLRRSLWHCGS*QKPIHAGGSSH
Trigger: GTGACTGCTTCCCCCAGCATGGATGGGCTTTTGGCAGGACCCACAATGCCACAAGCTCCTCCGCAACAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CAA 72 bp CATAGGCCCTGCTGCTCGGCATCTGTAAGCCTTGGTTaGGCGACATACTCATGCCGCCTACCGAACTGTTGC +
Preference number: 6 (lower is better)
Translates to: HRPCCSASVSLG*ATYSCRLPNCC
Trigger: GCAACAGTTCGGTAGGCGGCATGAGTATGTCGCCAAACCAAGGCTTACAGATGCCGAGCAGCAGGGCCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CAA 72 bp ATCGGGCCAGGAACCCAGTTGGTTAGATGCTGCTGCTaGGCCATAGGGATTAGCCCCCATTCCCATGGGGAT +
Preference number: 6 (lower is better)
Translates to: IGPGTQLVRCCC*AIGISPHSHGD
Trigger: ATCCCCATGGGAATGGGGGCTAATCCCTATGGCCAAGCAGCAGCATCTAACCAACTGGGTTCCTGGCCCGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CCA 72 bp GATATGGAAACTGTTGCGGAGGAGCTTGTGGCATTGTaGGTCCTGCCAAAAGCCCATCCATGCTGGGGGAAG +
Preference number: 6 (lower is better)
Translates to: DMETVAEELVAL*VLPKAHPCWGK
Trigger: CTTCCCCCAGCATGGATGGGCTTTTGGCAGGACCCACAATGCCACAAGCTCCTCCGCAACAGTTTCCATATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CAA 72 bp CTGGCCCTGCAGCCTCTGCTGAAGCTGCATTCTAAGTaGCTTGGGGGTGTTTGTCCGGGGTCTCATGATGTT +
Preference number: 6 (lower is better)
Translates to: LALQPLLKLHSK*LGGVCPGSHDV
Trigger: AACATCATGAGACCCCGGACAAACACCCCCAAGCAACTTAGAATGCAGCTTCAGCAGAGGCTGCAGGGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CAA 72 bp AGCAGTCACATTAGGAGGTGGGCTGAAGGCCTGGGTTaGCTGCTGTTGCTGCTGTTGCTGTTGCTGTTGCTG +
Preference number: 6 (lower is better)
Translates to: SSHIRRWAEGLG*LLLLLLLLLLL
Trigger: CAGCAACAGCAACAGCAACAGCAGCAACAGCAGCAAACCCAGGCCTTCAGCCCACCTCCTAATGTGACTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CAA 72 bp GTTGATATGGAAACTGTTGCGGAGGAGCTTGTGGCATaGTGGGTCCTGCCAAAAGCCCATCCATGCTGGGGG +
Preference number: 6 (lower is better)
Translates to: VDMETVAEELVA*WVLPKAHPCWG
Trigger: CCCCCAGCATGGATGGGCTTTTGGCAGGACCCACAATGCCACAAGCTCCTCCGCAACAGTTTCCATATCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 72 bp ACCACTGCTGCCATTCATGTGCACCATACTATACACTaGAGGATTCCCCTGGTGGGCAAACTGCTGCTGGGA +
Preference number: 6 (lower is better)
Translates to: TTAAIHVHHTIH*RIPLVGKLLLG
Trigger: TCCCAGCAGCAGTTTGCCCACCAGGGGAATCCTGCAGTGTATAGTATGGTGCACATGAATGGCAGCAGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CAA 72 bp TTCCATGGACAACATGCCATCGGGCCAGGAACCCAGTaGGTTAGATGCTGCTGCTTGGCCATAGGGATTAGC +
Preference number: 6 (lower is better)
Translates to: FHGQHAIGPGTQ*VRCCCLAIGIS
Trigger: GCTAATCCCTATGGCCAAGCAGCAGCATCTAACCAACTGGGTTCCTGGCCCGATGGCATGTTGTCCATGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CAA 90 bp AGAAACTTGTTCCATGGACAACATGCCATCGGGCCAGGAACCCAGTaGGTTAGATGCTGCTGCTTGGCCATAGGGATTAGCCCCCATTCC +
Preference number: 6 (lower is better)
Translates to: RNLFHGQHAIGPGTQ*VRCCCLAIGISPHS
Trigger: GGAATGGGGGCTAATCCCTATGGCCAAGCAGCAGCATCTAACCAACTGGGTTCCTGGCCCGATGGCATGTTGTCCATGGAACAAGTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 72 bp GGACTCCCACGATTACGAGGAGAAATCATGATATTCTaGTGGTTTGGGGCAAGACCAGGACTCCCATGTGGG +
Preference number: 6 (lower is better)
Translates to: GLPRLRGEIMIF*WFGARPGLPCG
Trigger: CCCACATGGGAGTCCTGGTCTTGCCCCAAACCAGCAGAATATCATGATTTCTCCTCGTAATCGTGGGAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 72 bp CTATACACTGCAGGATTCCCCTGGTGGGCAAACTGCTaGTGGGAAAAGGAGCTGTTCCTGGCCAAATTTCCT +
Preference number: 6 (lower is better)
Translates to: LYTAGFPWWANC*WEKELFLAKFP
Trigger: AGGAAATTTGGCCAGGAACAGCTCCTTTTCCCAGCAGCAGTTTGCCCACCAGGGGAATCCTGCAGTGTATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CCA 72 bp CATGCCGCCTACCGAACTGTTGCATCCAGCCATAGGTaGTCTAATCCCTTGTCCAACAGGATTTGGGTTTGG +
Preference number: 6 (lower is better)
Translates to: HAAYRTVASSHR*SNPLSNRIWVW
Trigger: CCAAACCCAAATCCTGTTGGACAAGGGATTAGACCACCTATGGCTGGATGCAACAGTTCGGTAGGCGGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CCA 72 bp ATTCTGCTGGTTTGGGGCAAGACCAGGACTCCCATGTaGGGGGCTACTCATGTTGAGCCCATAGTTGTTGTT +
Preference number: 6 (lower is better)
Translates to: ILLVWGKTRTPM*GATHVEPIVVV
Trigger: AACAACAACTATGGGCTCAACATGAGTAGCCCCCCACATGGGAGTCCTGGTCTTGCCCCAAACCAGCAGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CCA 72 bp GTGTGCAGCTGGTCCAATAATGCTCTTTCGTCACTCTaGCCTTCCAGGTTGGAAGGTGGCCCAACAAGATCA +
Preference number: 6 (lower is better)
Translates to: VCSWSNNALSSL*PSRLEGGPTRS
Trigger: TGATCTTGTTGGGCCACCTTCCAACCTGGAAGGCCAGAGTGACGAAAGAGCATTATTGGACCAGCTGCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CCA 72 bp CCTGTGGCATCTGTGTTGCTGAGAAGAGTGTGCAGCTaGTCCAATAATGCTCTTTCGTCACTCTGGCCTTCC +
Preference number: 6 (lower is better)
Translates to: PVASVLLRRVCS*SNNALSSLWPS
Trigger: GGAAGGCCAGAGTGACGAAAGAGCATTATTGGACCAGCTGCACACTCTTCTCAGCAACACAGATGCCACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CCA 72 bp ATGGATGCAGCCTGCGGGTGTTGCATCATGGGATTCTaGGAGGGACCCATTCTTGACGACATCATTGCATTG +
Preference number: 6 (lower is better)
Translates to: MDAACGCCIMGF*EGPILDDIIAL
Trigger: CAATGCAATGATGTCGTCAAGAATGGGTCCCTCCCAGAATCCCATGATGCAACACCCGCAGGCTGCATCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CCA 72 bp ACTGATAGATGGATGCAGCCTGCGGGTGTTGCATCATaGGATTCTGGGAGGGACCCATTCTTGACGACATCA +
Preference number: 6 (lower is better)
Translates to: TDRWMQPAGVAS*DSGRDPFLTTS
Trigger: TGATGTCGTCAAGAATGGGTCCCTCCCAGAATCCCATGATGCAACACCCGCAGGCTGCATCCATCTATCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CAA 72 bp TGGTTTGGCGACATACTCATGCCGCCTACCGAACTGTaGCATCCAGCCATAGGTGGTCTAATCCCTTGTCCA +
Preference number: 6 (lower is better)
Translates to: WFGDILMPPTEL*HPAIGGLIPCP
Trigger: TGGACAAGGGATTAGACCACCTATGGCTGGATGCAACAGTTCGGTAGGCGGCATGAGTATGTCGCCAAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CAA 90 bp CATGGGGATTTCACCAGGCCTCATTTGAAGCATCTGCTGCTGCTGTaGCAATACTGGTCTCGCACCTGGTATGCTATTAGACCGAAGAGG +
Preference number: 6 (lower is better)
Translates to: HGDFTRPHLKHLLLL*QYWSRTWYAIRPKR
Trigger: CCTCTTCGGTCTAATAGCATACCAGGTGCGAGACCAGTATTGCAACAGCAGCAGCAGATGCTTCAAATGAGGCCTGGTGAAATCCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CAA 90 bp CATAATTTGGTTGATATGGAAACTGTTGCGGAGGAGCTTGTGGCATaGTGGGTCCTGCCAAAAGCCCATCCATGCTGGGGGAAGCAGTCA +
Preference number: 6 (lower is better)
Translates to: HNLVDMETVAEELVA*WVLPKAHPCWGKQS
Trigger: TGACTGCTTCCCCCAGCATGGATGGGCTTTTGGCAGGACCCACAATGCCACAAGCTCCTCCGCAACAGTTTCCATATCAACCAAATTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS TCA 72 bp GGGAGAGTGCACACCTGCAACAGGAGAAAACTGATGTaGGGCTATCTTTGGACTCCCACGATTACGAGGAGA +
Preference number: 6 (lower is better)
Translates to: GRVHTCNRRKLM*GYLWTPTITRR
Trigger: TCTCCTCGTAATCGTGGGAGTCCAAAGATAGCCTCACATCAGTTTTCTCCTGTTGCAGGTGTGCACTCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 72 bp GCTGGAAAAGCTGTGGTTCCCAGTATTGCCAGAAGATaGCATGGGAGAGTGCACACCTGCAACAGGAGAAAA +
Preference number: 6 (lower is better)
Translates to: AGKAVVPSIARR*HGRVHTCNRRK
Trigger: TTTTCTCCTGTTGCAGGTGTGCACTCTCCCATGGCATCTTCTGGCAATACTGGGAACCACAGCTTTTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CCA 72 bp TGCTCTTTCGTCACTCTGGCCTTCCAGGTTGGAAGGTaGCCCAACAAGATCATCCAGGGAATTCCTAAGAAG +
Preference number: 6 (lower is better)
Translates to: CSFVTLAFQVGR*PNKIIQGIPKK
Trigger: CTTCTTAGGAATTCCCTGGATGATCTTGTTGGGCCACCTTCCAACCTGGAAGGCCAGAGTGACGAAAGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CAA 72 bp TTCTGGGAGGGACCCATTCTTGACGACATCATTGCATaGGGAGGACTAGACACTCGACCAAAGGCTGGATCT +
Preference number: 6 (lower is better)
Translates to: FWEGPILDDIIA*GGLDTRPKAGS
Trigger: AGATCCAGCCTTTGGTCGAGTGTCTAGTCCTCCCAATGCAATGATGTCGTCAAGAATGGGTCCCTCCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CAA 90 bp TGTAAGCCTTGGTTTGGCGACATACTCATGCCGCCTACCGAACTGTaGCATCCAGCCATAGGTGGTCTAATCCCTTGTCCAACAGGATTT +
Preference number: 6 (lower is better)
Translates to: CKPWFGDILMPPTEL*HPAIGGLIPCPTGF
Trigger: AAATCCTGTTGGACAAGGGATTAGACCACCTATGGCTGGATGCAACAGTTCGGTAGGCGGCATGAGTATGTCGCCAAACCAAGGCTTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS TCA 72 bp GACATGGGCATGGGGTTCATGTTCATCTGTCCCATGTaGCCACTGCTGCCATTCATGTGCACCATACTATAC +
Preference number: 6 (lower is better)
Translates to: DMGMGFMFICPM*PLLPFMCTILY
Trigger: GTATAGTATGGTGCACATGAATGGCAGCAGTGGTCACATGGGACAGATGAACATGAACCCCATGCCCATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CCA 72 bp CATCTGCTGCTGCTGTTGCAATACTGGTCTCGCACCTaGTATGCTATTAGACCGAAGAGGCAATGTGGGAAT +
Preference number: 6 (lower is better)
Translates to: HLLLLLQYWSRT*YAIRPKRQCGN
Trigger: ATTCCCACATTGCCTCTTCGGTCTAATAGCATACCAGGTGCGAGACCAGTATTGCAACAGCAGCAGCAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CCA 72 bp CCTCATTTGAAGCATCTGCTGCTGCTGTTGCAATACTaGTCTCGCACCTGGTATGCTATTAGACCGAAGAGG +
Preference number: 6 (lower is better)
Translates to: PHLKHLLLLLQY*SRTWYAIRPKR
Trigger: CCTCTTCGGTCTAATAGCATACCAGGTGCGAGACCAGTATTGCAACAGCAGCAGCAGATGCTTCAAATGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CAA 72 bp CCTAAGAAGAGGCCTATTTTGAGTGCCATGAGAAACTaGTTCCATGGACAACATGCCATCGGGCCAGGAACC +
Preference number: 6 (lower is better)
Translates to: PKKRPILSAMRN*FHGQHAIGPGT
Trigger: GGTTCCTGGCCCGATGGCATGTTGTCCATGGAACAAGTTTCTCATGGCACTCAAAATAGGCCTCTTCTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CAA 72 bp GCTCTGTCAATTTCTTCCAGGCCTGTGGCATCTGTGTaGCTGAGAAGAGTGTGCAGCTGGTCCAATAATGCT +
Preference number: 6 (lower is better)
Translates to: ALSISSRPVASV*LRRVCSWSNNA
Trigger: AGCATTATTGGACCAGCTGCACACTCTTCTCAGCAACACAGATGCCACAGGCCTGGAAGAAATTGACAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CAA 90 bp GCCGCCTACCGAACTGTTGCATCCAGCCATAGGTGGTCTAATCCCTaGTCCAACAGGATTTGGGTTTGGTCTATATCCATTCTGTTCTCT +
Preference number: 6 (lower is better)
Translates to: AAYRTVASSHRWSNP*SNRIWVWSISILFS
Trigger: AGAGAACAGAATGGATATAGACCAAACCCAAATCCTGTTGGACAAGGGATTAGACCACCTATGGCTGGATGCAACAGTTCGGTAGGCGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CAA 90 bp ATGCCCAAAGCTCTGTCAATTTCTTCCAGGCCTGTGGCATCTGTGTaGCTGAGAAGAGTGTGCAGCTGGTCCAATAATGCTCTTTCGTCA +
Preference number: 6 (lower is better)
Translates to: MPKALSISSRPVASV*LRRVCSWSNNALSS
Trigger: TGACGAAAGAGCATTATTGGACCAGCTGCACACTCTTCTCAGCAACACAGATGCCACAGGCCTGGAAGAAATTGACAGAGCTTTGGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CAA 90 bp GGTGTTTGTCCGGGGTCTCATGATGTTGGCTCGTGGGTGCATTCCTaGGAGAGGAAAATTGCCTTGCTGGTTCATCTGATTCATCATAGA +
Preference number: 6 (lower is better)
Translates to: GVCPGSHDVGSWVHS*ERKIALLVHLIHHR
Trigger: TCTATGATGAATCAGATGAACCAGCAAGGCAATTTTCCTCTCCAAGGAATGCACCCACGAGCCAACATCATGAGACCCCGGACAAACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS TCA 72 bp CTATCTTTGGACTCCCACGATTACGAGGAGAAATCATaGTATTCTGCTGGTTTGGGGCAAGACCAGGACTCC +
Preference number: 6 (lower is better)
Translates to: LSLDSHDYEEKS*YSAGLGQDQDS
Trigger: GGAGTCCTGGTCTTGCCCCAAACCAGCAGAATATCATGATTTCTCCTCGTAATCGTGGGAGTCCAAAGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS TCA 72 bp AGTGGCTTCTGCAGTAATCTTGGCTACCTCAGCTGGTaGATTCCCATTCTGCAGCAACTTGTGCAAAATCCG +
Preference number: 6 (lower is better)
Translates to: SGFCSNLGYLSW*IPILQQLVQNP
Trigger: CGGATTTTGCACAAGTTGCTGCAGAATGGGAATTCACCAGCTGAGGTAGCCAAGATTACTGCAGAAGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 72 bp CATAGTTGTTGTTCTGGTAGGAAGATGGTGATTGCATaGCTGGCCCAGGGGTCAATGAAGCTATGTTACTGG +
Preference number: 6 (lower is better)
Translates to: HSCCSGRKMVIA*LAQGSMKLCYW
Trigger: CCAGTAACATAGCTTCATTGACCCCTGGGCCAGGCATGCAATCACCATCTTCCTACCAGAACAACAACTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 72 bp ACCTCAGCTGGTGAATTCCCATTCTGCAGCAACTTGTaGAAAATCCGGTGCTTCTCTTGTAACAGTGACCCA +
Preference number: 6 (lower is better)
Translates to: TSAGEFPFCSNL*KIRCFSCNSDP
Trigger: TGGGTCACTGTTACAAGAGAAGCACCGGATTTTGCACAAGTTGCTGCAGAATGGGAATTCACCAGCTGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CCA 72 bp AAAAGCTGTGGTTCCCAGTATTGCCAGAAGATGCCATaGGAGAGTGCACACCTGCAACAGGAGAAAACTGAT +
Preference number: 6 (lower is better)
Translates to: KSCGSQYCQKMP*ESAHLQQEKTD
Trigger: ATCAGTTTTCTCCTGTTGCAGGTGTGCACTCTCCCATGGCATCTTCTGGCAATACTGGGAACCACAGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CAA 72 bp CAGGTAAGACCTTGTCCTGGAGTATCACATGGCAATTaGCGTTTTCGTGAATCACTGGCCAGTGGATCCAAG +
Preference number: 6 (lower is better)
Translates to: QVRPCPGVSHGN*RFRESLASGSK
Trigger: CTTGGATCCACTGGCCAGTGATTCACGAAAACGCAAATTGCCATGTGATACTCCAGGACAAGGTCTTACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CAA 72 bp TTCACCAGGCCTCATTTGAAGCATCTGCTGCTGCTGTaGCAATACTGGTCTCGCACCTGGTATGCTATTAGA +
Preference number: 6 (lower is better)
Translates to: FTRPHLKHLLLL*QYWSRTWYAIR
Trigger: TCTAATAGCATACCAGGTGCGAGACCAGTATTGCAACAGCAGCAGCAGATGCTTCAAATGAGGCCTGGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CAA 90 bp ATCTGGTTGTTGTCCCATTCCATAATTTGGTTGATATGGAAACTGTaGCGGAGGAGCTTGTGGCATTGTGGGTCCTGCCAAAAGCCCATC +
Preference number: 6 (lower is better)
Translates to: IWLLSHSIIWLIWKL*RRSLWHCGSCQKPI
Trigger: GATGGGCTTTTGGCAGGACCCACAATGCCACAAGCTCCTCCGCAACAGTTTCCATATCAACCAAATTATGGAATGGGACAACAACCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CAA 90 bp TTGTGCAAAATCCGGTGCTTCTCTTGTAACAGTGACCCATGCATATaGGATGTAGAGGATACTCCTCCAGATGTAGAGGAGGAGACTCCA +
Preference number: 6 (lower is better)
Translates to: LCKIRCFSCNSDPCI*DVEDTPPDVEEETP
Trigger: TGGAGTCTCCTCCTCTACATCTGGAGGAGTATCCTCTACATCCAATATGCATGGGTCACTGTTACAAGAGAAGCACCGGATTTTGCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CAA 90 bp GTAATCTTGGCTACCTCAGCTGGTGAATTCCCATTCTGCAGCAACTaGTGCAAAATCCGGTGCTTCTCTTGTAACAGTGACCCATGCATA +
Preference number: 6 (lower is better)
Translates to: VILATSAGEFPFCSN*CKIRCFSCNSDPCI
Trigger: TATGCATGGGTCACTGTTACAAGAGAAGCACCGGATTTTGCACAAGTTGCTGCAGAATGGGAATTCACCAGCTGAGGTAGCCAAGATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CAA 90 bp GCCTGGAACAATGATTCCTTCCCAATAATCCTAGTGCAGTGTCATTaGTACAGTGGTTTCCTTAAGAGGTCCTGGTGCAGAGATGTCAGC +
Preference number: 6 (lower is better)
Translates to: AWNNDSFPIILVQCH*YSGFLKRSWCRDVS
Trigger: GCTGACATCTCTGCACCAGGACCTCTTAAGGAAACCACTGTACAAATGACACTGCACTAGGATTATTGGGAAGGAATCATTGTTCCAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CAA 90 bp GCCCACCCATACTTGAGCCATAATTTTCCTGACTATCCATCATTCTaGGATTCCCACCCAACATGGGTTGCTTTGGTAACATGGGGAAAG +
Preference number: 6 (lower is better)
Translates to: AHPYLSHNFPDYPSF*DSHPTWVALVTWGK
Trigger: CTTTCCCCATGTTACCAAAGCAACCCATGTTGGGTGGGAATCCAAGAATGATGGATAGTCAGGAAAATTATGGCTCAAGTATGGGTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS TCA 72 bp TGTCAATTTCTTCCAGGCCTGTGGCATCTGTGTTGCTaGGAAGAGTGTGCAGCTGGTCCAATAATGCTCTTT +
Preference number: 6 (lower is better)
Translates to: CQFLPGLWHLCC*EECAAGPIMLF
Trigger: AAAGAGCATTATTGGACCAGCTGCACACTCTTCTCAGCAACACAGATGCCACAGGCCTGGAAGAAATTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 72 bp GTAATCTTGGCTACCTCAGCTGGTGAATTCCCATTCTaGAGCAACTTGTGCAAAATCCGGTGCTTCTCTTGT +
Preference number: 6 (lower is better)
Translates to: VILATSAGEFPF*SNLCKIRCFSC
Trigger: ACAAGAGAAGCACCGGATTTTGCACAAGTTGCTGCAGAATGGGAATTCACCAGCTGAGGTAGCCAAGATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CCA 72 bp AGATTGCAAATCTTCCCCTTCCTCCATCATAGCTCGTaGCTGAGACAGGGCAAAGCACTGCATTGTTTCATA +
Preference number: 6 (lower is better)
Translates to: RLQIFPFLHHSS*LRQGKALHCFI
Trigger: TATGAAACAATGCAGTGCTTTGCCCTGTCTCAGCCACGAGCTATGATGGAGGAAGGGGAAGATTTGCAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
ENST00000497292.1
CDS CCA 72 bp CATTGCATTGGGAGGACTAGACACTCGACCAAAGGCTaGATCTGGTTGTTGTCCCATTCCATAATTTGGTTG +
Preference number: 6 (lower is better)
Translates to: HCIGRTRHSTKG*IWLLSHSIIWL
Trigger: CAACCAAATTATGGAATGGGACAACAACCAGATCCAGCCTTTGGTCGAGTGTCTAGTCCTCCCAATGCAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CAA 72 bp ATCCGGTGCTTCTCTTGTAACAGTGACCCATGCATATaGGATGTAGAGGATACTCCTCCAGATGTAGAGGAG +
Preference number: 6 (lower is better)
Translates to: IRCFSCNSDPCI*DVEDTPPDVEE
Trigger: CTCCTCTACATCTGGAGGAGTATCCTCTACATCCAATATGCATGGGTCACTGTTACAAGAGAAGCACCGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 72 bp TGTCATTTGTACAGTGGTTTCCTTAAGAGGTCCTGGTaGAGAGATGTCAGCAGTATTTCTGATCAGGACCCA +
Preference number: 6 (lower is better)
Translates to: CHLYSGFLKRSW*RDVSSISDQDP
Trigger: TGGGTCCTGATCAGAAATACTGCTGACATCTCTGCACCAGGACCTCTTAAGGAAACCACTGTACAAATGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CCA 72 bp CAGTGTCATTTGTACAGTGGTTTCCTTAAGAGGTCCTaGTGCAGAGATGTCAGCAGTATTTCTGATCAGGAC +
Preference number: 6 (lower is better)
Translates to: QCHLYSGFLKRS*CRDVSSISDQD
Trigger: GTCCTGATCAGAAATACTGCTGACATCTCTGCACCAGGACCTCTTAAGGAAACCACTGTACAAATGACACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CAA 90 bp AGTCTCCCATACTTGAGCCATAATTTTCCTGACTATCCATCATTCTaGGATTCCCACCCAACATGGGTTGCTTTGGTAACATGGGGAAAG +
Preference number: 6 (lower is better)
Translates to: SLPYLSHNFPDYPSF*DSHPTWVALVTWGK
Trigger: CTTTCCCCATGTTACCAAAGCAACCCATGTTGGGTGGGAATCCAAGAATGATGGATAGTCAGGAAAATTATGGCTCAAGTATGGGAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371997.3
CDS GCA 72 bp TGCAAAATCCGGTGCTTCTCTTGTAACAGTGACCCATaGATATTGGATGTAGAGGATACTCCTCCAGATGTA +
Preference number: 6 (lower is better)
Translates to: CKIRCFSCNSDP*ILDVEDTPPDV
Trigger: TACATCTGGAGGAGTATCCTCTACATCCAATATGCATGGGTCACTGTTACAAGAGAAGCACCGGATTTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 72 bp GAATTCCCATTCTGCAGCAACTTGTGCAAAATCCGGTaGTTCTCTTGTAACAGTGACCCATGCATATTGGAT +
Preference number: 6 (lower is better)
Translates to: EFPFCSNLCKIR*FSCNSDPCILD
Trigger: ATCCAATATGCATGGGTCACTGTTACAAGAGAAGCACCGGATTTTGCACAAGTTGCTGCAGAATGGGAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CCA 72 bp CACTATAGTTCCATCAGCCAACGAGAATCGATATACTaGGGTTTCTGCATGGCCATTAAGATAAGCTGTTGG +
Preference number: 6 (lower is better)
Translates to: HYSSISQRESIY*GFCMAIKISCW
Trigger: CCAACAGCTTATCTTAATGGCCATGCAGAAACCCCAGTATATCGATTCTCGTTGGCTGATGGAACTATAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371997.3
CDS CCA 72 bp AGGTGGTCTAATCCCTTGTCCAACAGGATTTGGGTTTaGTCTATATCCATTCTGTTCTCTCTGAAGGAAGTG +
Preference number: 6 (lower is better)
Translates to: RWSNPLSNRIWV*SISILFSLKEV
Trigger: CACTTCCTTCAGAGAGAACAGAATGGATATAGACCAAACCCAAATCCTGTTGGACAAGGGATTAGACCACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CCA 72 bp AGCCATAGGTGGTCTAATCCCTTGTCCAACAGGATTTaGGTTTGGTCTATATCCATTCTGTTCTCTCTGAAG +
Preference number: 6 (lower is better)
Translates to: SHRWSNPLSNRI*VWSISILFSLK
Trigger: CTTCAGAGAGAACAGAATGGATATAGACCAAACCCAAATCCTGTTGGACAAGGGATTAGACCACCTATGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CAA 90 bp GAGACAAAGCCATGTCGATCATTTGTTACAGGATTTCGGAAGAGTTaGCTTTTTGTCTGTGCAGTCACTATAGTTCCATCAGCCAACGAG +
Preference number: 6 (lower is better)
Translates to: ETKPCRSFVTGFRKS*LFVCAVTIVPSANE
Trigger: CTCGTTGGCTGATGGAACTATAGTGACTGCACAGACAAAAAGCAAACTCTTCCGAAATCCTGTAACAAATGATCGACATGGCTTTGTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CAA 90 bp GTTCTCTCTGAAGGAAGTGGGTTGAGACAAAGCCATGTCGATCATTaGTTACAGGATTTCGGAAGAGTTTGCTTTTTGTCTGTGCAGTCA +
Preference number: 6 (lower is better)
Translates to: VLSEGSGLRQSHVDH*LQDFGRVCFLSVQS
Trigger: TGACTGCACAGACAAAAAGCAAACTCTTCCGAAATCCTGTAACAAATGATCGACATGGCTTTGTCTCAACCCACTTCCTTCAGAGAGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CAA 90 bp AAAGCCCAGAGGACTCTTGGAATCCTGATTGCTTACTTTACTTGGTaGGGTAATATTCATATTGGGAGAGTTATCCAATTTGGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: KAQRTLGILIAYFTW*GNIHIGRVIQFGAW
Trigger: CCAGGCCCCAAATTGGATAACTCTCCCAATATGAATATTACCCAACCAAGTAAAGTAAGCAATCAGGATTCCAAGAGTCCTCTGGGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS GCA 72 bp AGAGACACTGCTCGGTTATATGGAGGACGAATAGACTaGACAGACTGTGAACTTTTCAAACCCAGAGAATTA +
Preference number: 6 (lower is better)
Translates to: RDTARLYGGRID*TDCELFKPREL
Trigger: TAATTCTCTGGGTTTGAAAAGTTCACAGTCTGTGCAGTCTATTCGTCCTCCATATAACCGAGCAGTGTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CCA 72 bp CACTATAGTTCCATCAGCCAACGAGAATCGATATACTaGGGTTTCTGCATGGCCATTAAGATAAGCTTCTTG +
Preference number: 6 (lower is better)
Translates to: HYSSISQRESIY*GFCMAIKISFL
Trigger: CAAGAAGCTTATCTTAATGGCCATGCAGAAACCCCAGTATATCGATTCTCGTTGGCTGATGGAACTATAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371998.8
ENST00000372004.7
CDS TCA 72 bp CAAAGGATGTTCAAGCAGTTTATTTTTATTGGTCTCTaGGTCCACCATCCAGCAAGTATTTTGATCCTCCCG +
Preference number: 6 (lower is better)
Translates to: QRMFKQFIFIGL*VHHPASILILP
Trigger: CGGGAGGATCAAAATACTTGCTGGATGGTGGACTCAGAGACCAATAAAAATAAACTGCTTGAACATCCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CCA 72 bp TACTGGGGTTTCTGCATGGCCATTAAGATAAGCTGTTaGGGAAAATATCCCATCACTGGTAACTTCTTGATA +
Preference number: 6 (lower is better)
Translates to: YWGFCMAIKISC*GKYPITGNFLI
Trigger: TATCAAGAAGTTACCAGTGATGGGATATTTTCCCCAACAGCTTATCTTAATGGCCATGCAGAAACCCCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371997.3
CDS CAA 72 bp GAAGGAAGTGGGTTGAGACAAAGCCATGTCGATCATTaGTTACAGGATTTCGGAAGAGTTTGCTTTTTGTCT +
Preference number: 6 (lower is better)
Translates to: EGSGLRQSHVDH*LQDFGRVCFLS
Trigger: AGACAAAAAGCAAACTCTTCCGAAATCCTGTAACAAATGATCGACATGGCTTTGTCTCAACCCACTTCCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CAA 72 bp TACTTGAGCCATAATTTTCCTGACTATCCATCATTCTaGGATTCCCACCCAACATGGGTTGCTTTGGTAACA +
Preference number: 6 (lower is better)
Translates to: YLSHNFPDYPSF*DSHPTWVALVT
Trigger: TGTTACCAAAGCAACCCATGTTGGGTGGGAATCCAAGAATGATGGATAGTCAGGAAAATTATGGCTCAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
CDS CCA 72 bp TTCAGGACTGGCGTTTATGTCTTCCAGAATATCATGTaGTGTTTTCATCAACATACGGCAATTAAATGTATG +
Preference number: 6 (lower is better)
Translates to: FRTGVYVFQNIM*CFHQHTAIKCM
Trigger: CATACATTTAATTGCCGTATGTTGATGAAAACACCACATGATATTCTGGAAGACATAAACGCCAGTCCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371997.3
ENST00000371998.8
ENST00000372004.7
ENST00000497292.1