RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NCOA2 (Homo sapiens)

Ensembl gene IDs: ENSG00000140396

Ensembl transcript IDs: ENST00000452400.7, ENST00000518287.6, ENST00000518363.2, ENST00000519724.1, ENST00000520416.1, ENST00000521239.1, ENST00000524223.1

Found 844 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTGGATGCGAGCTTCAGACTGTCAAGAGAAGAGGCAGCTCCTCCTaGCACAGCCGAGTGGACGCCACCCTGGGAACCAGGGCCAGGCCT +
Preference number: 1 (lower is better)
Translates to: SGCELQTVKRRGSSS*HSRVDATLGTRARP
Trigger: AGGCCTGGCCCTGGTTCCCAGGGTGGCGTCCACTCGGCTGTGGCAGGAGGAGCTGCCTCTTCTCTTGACAGTCTGAAGCTCGCATCCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
3UTR CCA 90 bp ACCCTGGGAACCAGGGCCAGGCCTGTCTGCTCTAGCAGAACCGGCTaGCAGGTCAGTTGGGTTGAAACAAATAGACACAGCTCTCCAGAC +
Preference number: 1 (lower is better)
Translates to: TLGTRARPVCSSRTG*QVSWVETNRHSSPD
Trigger: GTCTGGAGAGCTGTGTCTATTTGTTTCAACCCAACTGACCTGCCAGCCGGTTCTGCTAGAGCAGACAGGCCTGGCCCTGGTTCCCAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
3UTR CCA 90 bp GTTCCCCTGCGCCCATCCATTTATGTCGGAGGGGGCCTGATAGGCTaGGTTGGCCTGAGACTGTTGCATCATGGGACTCTGTGTATGTGC +
Preference number: 1 (lower is better)
Translates to: VPLRPSIYVGGGLIG*VGLRLLHHGTLCMC
Trigger: GCACATACACAGAGTCCCATGATGCAACAGTCTCAGGCCAACCCAGCCTATCAGGCCCCCTCCGACATAAATGGATGGGCGCAGGGGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CCA 90 bp CCTGCGCCCATCCATTTATGTCGGAGGGGGCCTGATAGGCTGGGTTaGCCTGAGACTGTTGCATCATGGGACTCTGTGTATGTGCCATTC +
Preference number: 1 (lower is better)
Translates to: PAPIHLCRRGPDRLG*PETVASWDSVYVPF
Trigger: GAATGGCACATACACAGAGTCCCATGATGCAACAGTCTCAGGCCAACCCAGCCTATCAGGCCCCCTCCGACATAAATGGATGGGCGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CCA 90 bp TCAATCTCCTCCAGGCCATCAAAATTCCGCAAGGCCAGATACAGCTaGTCCAGGAGAGCTCCCTCATCACTCGGAGACTCAGCTGCAGGA +
Preference number: 1 (lower is better)
Translates to: SISSRPSKFRKARYS*SRRAPSSLGDSAAG
Trigger: TCCTGCAGCTGAGTCTCCGAGTGATGAGGGAGCTCTCCTGGACCAGCTGTATCTGGCCTTGCGGAATTTTGATGGCCTGGAGGAGATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CCA 90 bp GTAGGCACGGAGGTCACTGAGGTCATGCTGATCTGTCCTGTCATCTaGTTCATGCTGCTCATGCCACCTGTGTTGGTCGCCATGGACACA +
Preference number: 1 (lower is better)
Translates to: VGTEVTEVMLICPVI*FMLLMPPVLVAMDT
Trigger: TGTGTCCATGGCGACCAACACAGGTGGCATGAGCAGCATGAACCAGATGACAGGACAGATCAGCATGACCTCAGTGACCTCCGTGCCTAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR TCA 90 bp TGTGGGAAAACGGGCGCCTTCTGCTCCAGCATGATGTTGGAATCCTaGCTTGAGAACTGTTCTGGATCTACTGCTTGGCTCTGGCTGACC +
Preference number: 1 (lower is better)
Translates to: CGKTGAFCSSMMLES*LENCSGSTAWLWLT
Trigger: GGTCAGCCAGAGCCAAGCAGTAGATCCAGAACAGTTCTCAAGTCAGGATTCCAACATCATGCTGGAGCAGAAGGCGCCCGTTTTCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CCA 90 bp AGAATAGCTACCCTGGGCCATTTGTGCCTGAGATGCATACTGCTGTaGGAAAACGGGCGCCTTCTGCTCCAGCATGATGTTGGAATCCTG +
Preference number: 1 (lower is better)
Translates to: RIATLGHLCLRCILL*ENGRLLLQHDVGIL
Trigger: CAGGATTCCAACATCATGCTGGAGCAGAAGGCGCCCGTTTTCCCACAGCAGTATGCATCTCAGGCACAAATGGCCCAGGGTAGCTATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CCA 90 bp ACGGAGTGTGGCATAACTAGGCCGCTGTCCCATGGTGTGAAAGTTTaGATCTTGCATGGGAGAATAGCTACCCTGGGCCATTTGTGCCTG +
Preference number: 1 (lower is better)
Translates to: TECGITRPLSHGVKV*ILHGRIATLGHLCL
Trigger: CAGGCACAAATGGCCCAGGGTAGCTATTCTCCCATGCAAGATCCAAACTTTCACACCATGGGACAGCGGCCTAGTTATGCCACACTCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CCA 90 bp CTGCTGTGCATTTGCCTGGGGAATCCGAGGGTTGCTCATAGTTGCTaGCATACCACTAGGAGCCACCATGCTTGGTGTCATATTCAACCC +
Preference number: 1 (lower is better)
Translates to: LLCICLGNPRVAHSC*HTTRSHHAWCHIQP
Trigger: GGGTTGAATATGACACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCCTCGGATTCCCCAGGCAAATGCACAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR TCA 90 bp GAAAACGGGCGCCTTCTGCTCCAGCATGATGTTGGAATCCTGACTTaGGAACTGTTCTGGATCTACTGCTTGGCTCTGGCTGACCAGTTC +
Preference number: 1 (lower is better)
Translates to: ENGRLLLQHDVGILT*ELFWIYCLALADQF
Trigger: GAACTGGTCAGCCAGAGCCAAGCAGTAGATCCAGAACAGTTCTCAAGTCAGGATTCCAACATCATGCTGGAGCAGAAGGCGCCCGTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR GCA 90 bp AAAGTTTGGATCTTGCATGGGAGAATAGCTACCCTGGGCCATTTGTaGCTGAGATGCATACTGCTGTGGGAAAACGGGCGCCTTCTGCTC +
Preference number: 1 (lower is better)
Translates to: KVWILHGRIATLGHL*LRCILLWENGRLLL
Trigger: GAGCAGAAGGCGCCCGTTTTCCCACAGCAGTATGCATCTCAGGCACAAATGGCCCAGGGTAGCTATTCTCCCATGCAAGATCCAAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CCA 90 bp CATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCAAAGTGTaGTGGGGACTGCTGGGAAAACATGCTGTTTCCGCCCATGTTCCC +
Preference number: 1 (lower is better)
Translates to: HVVTVHAGVCLLPKV*WGLLGKHAVSAHVP
Trigger: GGGAACATGGGCGGAAACAGCATGTTTTCCCAGCAGTCCCCACCACACTTTGGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR TCA 90 bp GAGATGCATACTGCTGTGGGAAAACGGGCGCCTTCTGCTCCAGCATaGTGTTGGAATCCTGACTTGAGAACTGTTCTGGATCTACTGCTT +
Preference number: 1 (lower is better)
Translates to: EMHTAVGKRAPSAPA*CWNPDLRTVLDLLL
Trigger: AAGCAGTAGATCCAGAACAGTTCTCAAGTCAGGATTCCAACATCATGCTGGAGCAGAAGGCGCCCGTTTTCCCACAGCAGTATGCATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR TCA 90 bp GGTTCATGCTGCTCATGCCACCTGTGTTGGTCGCCATGGACACATTaGTGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCC +
Preference number: 1 (lower is better)
Translates to: GSCCSCHLCWSPWTH*CSCCYCTCWCLLAA
Trigger: GGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAATGTGTCCATGGCGACCAACACAGGTGGCATGAGCAGCATGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR GCA 90 bp AAACTGCTGTGCATTTGCCTGGGGAATCCGAGGGTTGCTCATAGTTaGTGGCATACCACTAGGAGCCACCATGCTTGGTGTCATATTCAA +
Preference number: 1 (lower is better)
Translates to: KLLCICLGNPRVAHS*WHTTRSHHAWCHIQ
Trigger: TTGAATATGACACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCCTCGGATTCCCCAGGCAAATGCACAGCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR TCA 90 bp ATATTTCTGAACATTAAAACTGGTCACACTGAATTGTATGCCACATaGGCCTCAGCCCACGGGGAGGTCCTGGAGTTCTGGGCCAACATC +
Preference number: 1 (lower is better)
Translates to: IFLNIKTGHTELYAT*ASAHGEVLEFWANI
Trigger: GATGTTGGCCCAGAACTCCAGGACCTCCCCGTGGGCTGAGGCTCATGTGGCATACAATTCAGTGTGACCAGTTTTAATGTTCAGAAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
3UTR TCA 90 bp ACTCCAGGCCTCAGAGTCAAGTTCACATTGGAAACATTGCTGATTTaGTTCATAAGTGGCTGGCGATTCTGCTGTGCTTGGAGGCGATGC +
Preference number: 1 (lower is better)
Translates to: TPGLRVKFTLETLLI*FISGWRFCCAWRRC
Trigger: GCATCGCCTCCAAGCACAGCAGAATCGCCAGCCACTTATGAATCAAATCAGCAATGTTTCCAATGTGAACTTGACTCTGAGGCCTGGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR GCA 90 bp CTGACTTATTCCGTAGTTTGGAGGAAATGGAAACTGCTGTGCATTTaGCTGGGGAATCCGAGGGTTGCTCATAGTTGCTGGCATACCACT +
Preference number: 1 (lower is better)
Translates to: LTYSVVWRKWKLLCI*LGNPRVAHSCWHTT
Trigger: AGTGGTATGCCAGCAACTATGAGCAACCCTCGGATTCCCCAGGCAAATGCACAGCAGTTTCCATTTCCTCCAAACTACGGAATAAGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR GCA 90 bp AGGTTGCTGACTTATTCCGTAGTTTGGAGGAAATGGAAACTGCTGTaGATTTGCCTGGGGAATCCGAGGGTTGCTCATAGTTGCTGGCAT +
Preference number: 1 (lower is better)
Translates to: RLLTYSVVWRKWKLL*ICLGNPRVAHSCWH
Trigger: ATGCCAGCAACTATGAGCAACCCTCGGATTCCCCAGGCAAATGCACAGCAGTTTCCATTTCCTCCAAACTACGGAATAAGTCAGCAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CCA 90 bp ATTTGTCTCTGTCGAAGATGCTGGTTCAGGATTTCCCTCTGTCTCTaGGCCAGCATCTGTGCATTAATAGGTGCCTGTGTTGGTACTCCA +
Preference number: 1 (lower is better)
Translates to: ICLCRRCWFRISLCL*ASICALIGACVGTP
Trigger: TGGAGTACCAACACAGGCACCTATTAATGCACAGATGCTGGCCCAGAGACAGAGGGAAATCCTGAACCAGCATCTTCGACAGAGACAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR GCA 90 bp CATGGACACATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTaGTTGCTGCCCAAAGTGTGGTGGGGACTGCTGGGAAAACATGCT +
Preference number: 1 (lower is better)
Translates to: HGHIDVHVVTVHAGV*LLPKVWWGLLGKHA
Trigger: AGCATGTTTTCCCAGCAGTCCCCACCACACTTTGGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAATGTGTCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CCA 90 bp AGGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTaGTGTCATATTCAACCCTTGTCCTCTCATCATCAAAGTTCGTTG +
Preference number: 1 (lower is better)
Translates to: RVAHSCWHTTRSHHA*CHIQPLSSHHQSSL
Trigger: CAACGAACTTTGATGATGAGAGGACAAGGGTTGAATATGACACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR GCA 90 bp GACACATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTaGTGCCCAAAGTGTGGTGGGGACTGCTGGGAAAACATGCTGTTT +
Preference number: 1 (lower is better)
Translates to: DTLMFMLLLYMLVFA*CPKCGGDCWENMLF
Trigger: AAACAGCATGTTTTCCCAGCAGTCCCCACCACACTTTGGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAATGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CCA 90 bp CAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATaGTCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTC +
Preference number: 1 (lower is better)
Translates to: QAPFHLFSNWRLFPT*SLELSRDTTVTLLV
Trigger: GACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGACCATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
3UTR-3UTR TCA 90 bp GAGGCAGCTCCTCCTGCCACAGCCGAGTGGACGCCACCCTGGGAACCAGGGCCAAGACTGGAAGTGTTTTaGGCAAGTGAGCCCGGTCAG +
Preference number: 2 (lower is better)
Translates to: EAAPPATAEWTPPWEPGPRLEVF*ASEPGQ
Trigger: CTGACCGGGCTCACTTGCTCAAAACACTTCCAGTCT...TGGCCCTGGTTCCCAGGGTGGCGTCCACTCGGCTGTGGCAGGAGGAGCTGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
3UTR-3UTR CCA 90 bp GCGCCCATCCATTTATGTCGGAGGGGGCCTGATAGGCTGGGTTGGCCTGAGACTTCTAGCAGAACCGGCTaGCAGGTCAGTTGGGTTGAA +
Preference number: 2 (lower is better)
Translates to: APIHLCRRGPDRLGWPETSSRTG*QVSWVE
Trigger: TTCAACCCAACTGACCTGCCAGCCGGTTCTGCTAGA...AGTCTCAGGCCAACCCAGCCTATCAGGCCCCCTCCGACATAAATGGATGGGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR TCA 90 bp GCGCCCATCCATTTATGTCGGAGGGGGCCTGATAGGCTGGGTTGGCCTGAGACTAGTGTTTTGAGCAAGTaGGCCCGGTCAGCTGAAGAA +
Preference number: 2 (lower is better)
Translates to: APIHLCRRGPDRLGWPETSVLSK*ARSAEE
Trigger: TTCTTCAGCTGACCGGGCTCACTTGCTCAAAACACT...AGTCTCAGGCCAACCCAGCCTATCAGGCCCCCTCCGACATAAATGGATGGGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR CCA 90 bp GAGGACAGCCCTGACGTAGGCACGGAGGTCACTGAGGTCATGCTGATCTGTCCTGCTGCCTGTTTTGGCTaGCAAAAGACGCCTGGTCTA +
Preference number: 2 (lower is better)
Translates to: EDSPDVGTEVTEVMLICPAACFG*QKTPGL
Trigger: TAGACCAGGCGTCTTTTGCCAGCCAAAACAGGCAGC...AGGACAGATCAGCATGACCTCAGTGACCTCCGTGCCTACGTCAGGGCTGTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR CCA 90 bp GCGCCCATCCATTTATGTCGGAGGGGGCCTGATAGGCTGGGTTGGCCTGAGACTAATAGGTGCCTGTGTTaGTACTCCAGGCCTCAGAGT +
Preference number: 2 (lower is better)
Translates to: APIHLCRRGPDRLGWPETNRCLC*YSRPQS
Trigger: ACTCTGAGGCCTGGAGTACCAACACAGGCACCTATT...AGTCTCAGGCCAACCCAGCCTATCAGGCCCCCTCCGACATAAATGGATGGGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR CCA 90 bp CGTGATATGAAGCCACTGGGTTGCTTCTCCTTGGGCACTCACCTGCTCGGGACCTTGCTGCCCAAAGTGTaGTGGGGACTGCTGGGAAAA +
Preference number: 2 (lower is better)
Translates to: RDMKPLGCFSLGTHLLGTLLPKV*WGLLGK
Trigger: TTTTCCCAGCAGTCCCCACCACACTTTGGGCAGCAA...GGTCCCGAGCAGGTGAGTGCCCAAGGAGAAGCAACCCAGTGGCTTCATATCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR CCA 90 bp GAGGACAGCCCTGACGTAGGCACGGAGGTCACTGAGGTCATGCTGATCTGTCCTGTTGCTCATAGTTGCTaGCATACCACTAGGAGCCAC +
Preference number: 2 (lower is better)
Translates to: EDSPDVGTEVTEVMLICPVAHSC*HTTRSH
Trigger: GTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAAC...AGGACAGATCAGCATGACCTCAGTGACCTCCGTGCCTACGTCAGGGCTGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR TCA 90 bp GTTTGGAGGAAATGGAAACTGCTGTGCATTTGCCTGGGGAATCCGAGGGTTGCTGTGAGCCCGGTCAGCTaGAGAAGCAACTGGCTTCAG +
Preference number: 2 (lower is better)
Translates to: VWRKWKLLCICLGNPRVAVSPVS*RSNWLQ
Trigger: CTGAAGCCAGTTGCTTCTTCAGCTGACCGGGCTCAC...AGCAACCCTCGGATTCCCCAGGCAAATGCACAGCAGTTTCCATTTCCTCCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CAA 90 bp CCAGGCCTGTCTGCTCTAGCAGAACCGGCTGGCAGGTCAGTTGGGTaGAAACAAATAGACACAGCTCTCCAGACTGGAAGTGTTTTGAGC +
Preference number: 2 (lower is better)
Translates to: PGLSALAEPAGRSVG*KQIDTALQTGSVLS
Trigger: GCTCAAAACACTTCCAGTCTGGAGAGCTGTGTCTATTTGTTTCAACCCAACTGACCTGCCAGCCGGTTCTGCTAGAGCAGACAGGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
3UTR CAA 90 bp GGAGGAAATGGAAACTGCTGTGCATTTGCCTGGGGAATCCGAGGGTaGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGT +
Preference number: 2 (lower is better)
Translates to: GGNGNCCAFAWGIRG*LIVAGIPLGATMLG
Trigger: ACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCCTCGGATTCCCCAGGCAAATGCACAGCAGTTTCCATTTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR GCA 90 bp GGACACATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCAGGGCCAGGCCTGTCTaGTCTAGCAGAACCGGCTGG +
Preference number: 2 (lower is better)
Translates to: GHIDVHVVTVHAGVCLLPRARPV*SSRTGW
Trigger: CCAGCCGGTTCTGCTAGAGCAGACAGGCCTGGCCCT...GGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAATGTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR GCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATCCTTGGGCACTCACCTaGTCGGGACCCATGGAGGAC +
Preference number: 2 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHPWALT*SGPMED
Trigger: GTCCTCCATGGGTCCCGAGCAGGTGAGTGCCCAAGG...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CAA 90 bp GTGAAAGTTTGGATCTTGCATGGGAGAATAGCTACCCTGGGCCATTaGTGCCTGAGATGCATACTGCTGTGGGAAAACGGGCGCCTTCTG +
Preference number: 2 (lower is better)
Translates to: VKVWILHGRIATLGH*CLRCILLWENGRLL
Trigger: CAGAAGGCGCCCGTTTTCCCACAGCAGTATGCATCTCAGGCACAAATGGCCCAGGGTAGCTATTCTCCCATGCAAGATCCAAACTTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR GCA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTAGGGCCAGGCCTGTCTaGTCTAGCAGAACCGGCTGG +
Preference number: 2 (lower is better)
Translates to: KVEPFEGIYELVATEKCCRARPV*SSRTGW
Trigger: CCAGCCGGTTCTGCTAGAGCAGACAGGCCTGGCCCT...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
3UTR-3UTR GCA 90 bp GGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTGTCATACTGTTCTGGATCTACTaGTTGGCTCTGGCTGACCAG +
Preference number: 2 (lower is better)
Translates to: GLLIVAGIPLGATMLGVILFWIY*LALADQ
Trigger: CTGGTCAGCCAGAGCCAAGCAGTAGATCCAGAACAG...TATGACACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR TCA 90 bp CTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTGTCATATTCAACGGCCATGGGGCAGTCTaGTTTGGAGGAGCTTGTTGT +
Preference number: 2 (lower is better)
Translates to: LIVAGIPLGATMLGVIFNGHGAV*FGGACC
Trigger: ACAACAAGCTCCTCCAAATCAGACTGCCCCATGGCC...GTTGAATATGACACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR TCA 90 bp GTTTGGAGGAAATGGAAACTGCTGTGCATTTGCCTGGGGAATCCGAGGGTTGCTCCTTCTGCTCCAGCATaGTGTTGGAATCCTGACTTG +
Preference number: 2 (lower is better)
Translates to: VWRKWKLLCICLGNPRVAPSAPA*CWNPDL
Trigger: CAAGTCAGGATTCCAACATCATGCTGGAGCAGAAGG...AGCAACCCTCGGATTCCCCAGGCAAATGCACAGCAGTTTCCATTTCCTCCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR TCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATATGTGCCATTCGGGGTaGCATAAGTGGGCTCTGGGG +
Preference number: 2 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHMCHSG*HKWALG
Trigger: CCCCAGAGCCCACTTATGTCACCCCGAATGGCACAT...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR GCA 90 bp GGCGATGCTGAAGTTGAAGTCTTAGTTGATTTGGCTGGTTCTGCACTAGGCCCGAAAACGGGCGCCTTCTaGTCCAGCATGATGTTGGAA +
Preference number: 2 (lower is better)
Translates to: GDAEVEVLVDLAGSALGPKTGAF*SSMMLE
Trigger: TTCCAACATCATGCTGGAGCAGAAGGCGCCCGTTTT...CGGGCCTAGTGCAGAACCAGCCAAATCAACTAAGACTTCAACTTCAGCATCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR CCA 90 bp TCATCACTCGGAGACTCAGCTGCAGGATGTGGACATAGCAAGTCATCTGGAGAAAATGGCTGCCTGTTTTaGCTGGCAAAAGACGCCTGG +
Preference number: 2 (lower is better)
Translates to: SSLGDSAAGCGHSKSSGENGCLF*LAKDAW
Trigger: CCAGGCGTCTTTTGCCAGCCAAAACAGGCAGCCATT...TTCTCCAGATGACTTGCTATGTCCACATCCTGCAGCTGAGTCTCCGAGTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR GCA 90 bp GGACACATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCCTGGCGATTCTGCTGTaGTTGGAGGCGATGCTGAAG +
Preference number: 2 (lower is better)
Translates to: GHIDVHVVTVHAGVCLLPLAILL*LEAMLK
Trigger: CTTCAGCATCGCCTCCAAGCACAGCAGAATCGCCAG...GGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAATGTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR CCA 90 bp CTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTGTCATATTCAACTCTGGATCTACTGCTTaGCTCTGGCTGACCAGTTCG +
Preference number: 2 (lower is better)
Translates to: LIVAGIPLGATMLGVIFNSGSTA*LWLTSS
Trigger: CGAACTGGTCAGCCAGAGCCAAGCAGTAGATCCAGA...GTTGAATATGACACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CAA 90 bp CTCATGCCACCTGTGTTGGTCGCCATGGACACATTGATGTTCATGTaGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCAAAGTGTGGT +
Preference number: 2 (lower is better)
Translates to: LMPPVLVAMDTLMFM*LLYMLVFACCPKCG
Trigger: ACCACACTTTGGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAATGTGTCCATGGCGACCAACACAGGTGGCATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CAA 90 bp TGGTTCATGCTGCTCATGCCACCTGTGTTGGTCGCCATGGACACATaGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGC +
Preference number: 2 (lower is better)
Translates to: WFMLLMPPVLVAMDT*MFMLLLYMLVFACC
Trigger: GCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAATGTGTCCATGGCGACCAACACAGGTGGCATGAGCAGCATGAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR TCA 90 bp GGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTGTCATAGTTGGAATCCTGACTTaGGAACTGTTCTGGATCTAC +
Preference number: 2 (lower is better)
Translates to: GLLIVAGIPLGATMLGVIVGILT*ELFWIY
Trigger: GTAGATCCAGAACAGTTCTCAAGTCAGGATTCCAAC...TATGACACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR CCA 90 bp AGGCTCTATCAATCTCCTCCAGGCCATCAAAATTCCGCAAGGCCAGATACAGCTGGCTGGCAGGTCAGTTaGGTTGAAACAAATAGACAC +
Preference number: 2 (lower is better)
Translates to: RLYQSPPGHQNSARPDTAGWQVS*VETNRH
Trigger: GTGTCTATTTGTTTCAACCCAACTGACCTGCCAGCC...AGCTGTATCTGGCCTTGCGGAATTTTGATGGCCTGGAGGAGATTGATAGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR CCA 90 bp ATCCGAGGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTCATCTGTTCAGTAACTaGAGACTCTTTCCAACATGG +
Preference number: 2 (lower is better)
Translates to: IRGLLIVAGIPLGATMLGHLFSN*RLFPTW
Trigger: CCATGTTGGAAAGAGTCTCCAGTTACTGAACAGATG...ACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCCTCGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR CCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATCGTTTTCTCCCATTTTaGAGGCCAGAGTTGCTGGGG +
Preference number: 2 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHRFLPF*RPELLG
Trigger: CCCCAGCAACTCTGGCCTCCAAAATGGGAGAAAACG...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
3UTR-3UTR CCA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTTGTGGTGGGGACTGCTaGGAAAACATGCTGTTTCCG +
Preference number: 2 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVCGGDC*ENMLFP
Trigger: CGGAAACAGCATGTTTTCCCAGCAGTCCCCACCACA...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CAA 90 bp TACTCCAGGCCTCAGAGTCAAGTTCACATTGGAAACATTGCTGATTaGATTCATAAGTGGCTGGCGATTCTGCTGTGCTTGGAGGCGATG +
Preference number: 2 (lower is better)
Translates to: YSRPQSQVHIGNIAD*IHKWLAILLCLEAM
Trigger: CATCGCCTCCAAGCACAGCAGAATCGCCAGCCACTTATGAATCAAATCAGCAATGTTTCCAATGTGAACTTGACTCTGAGGCCTGGAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CAA 90 bp TGGCATACCACTAGGAGCCACCATGCTTGGTGTCATATTCAACCCTaGTCCTCTCATCATCAAAGTTCGTTGCTGAACTTGCTGTTGCTG +
Preference number: 2 (lower is better)
Translates to: WHTTRSHHAWCHIQP*SSHHQSSLLNLLLL
Trigger: CAGCAACAGCAAGTTCAGCAACGAACTTTGATGATGAGAGGACAAGGGTTGAATATGACACCAAGCATGGTGGCTCCTAGTGGTATGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CAA 90 bp GGACACATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTaGCTGCCCAAAGTGTGGTGGGGACTGCTGGGAAAACATGCTGTT +
Preference number: 2 (lower is better)
Translates to: GHIDVHVVTVHAGVC*LPKVWWGLLGKHAV
Trigger: AACAGCATGTTTTCCCAGCAGTCCCCACCACACTTTGGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAATGTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CAA 90 bp CTGATCTGTCCTGTCATCTGGTTCATGCTGCTCATGCCACCTGTGTaGGTCGCCATGGACACATTGATGTTCATGTTGTTACTGTACATG +
Preference number: 2 (lower is better)
Translates to: LICPVIWFMLLMPPV*VAMDTLMFMLLLYM
Trigger: CATGTACAGTAACAACATGAACATCAATGTGTCCATGGCGACCAACACAGGTGGCATGAGCAGCATGAACCAGATGACAGGACAGATCAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR TCA 90 bp GGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTGTCATAATGATGTTGGAATCCTaGCTTGAGAACTGTTCTGGA +
Preference number: 2 (lower is better)
Translates to: GLLIVAGIPLGATMLGVIMMLES*LENCSG
Trigger: TCCAGAACAGTTCTCAAGTCAGGATTCCAACATCAT...TATGACACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR GCA 90 bp CATATAAATTGGATTTTATGTACCTTACAAAACTTCGGCTTAGTCAGCACTGCTAGAGGCAGCTCCTCCTaGCACAGCCGAGTGGACGCC +
Preference number: 2 (lower is better)
Translates to: HINWILCTLQNFGLVSTARGSSS*HSRVDA
Trigger: GGCGTCCACTCGGCTGTGGCAGGAGGAGCTGCCTCT...AGCAGTGCTGACTAAGCCGAAGTTTTGTAAGGTACATAAAATCCAATTTATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
3UTR-3UTR GCA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGGAGCGACTGTCTGGATaGGAGCTTCAGACTGTCAAG +
Preference number: 2 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWERLSG*ELQTVK
Trigger: CTTGACAGTCTGAAGCTCGCATCCAGACAGTCGCTC...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
3UTR-3UTR GCA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGACCCTGGGCCATTTGTaGCTGAGATGCATACTGCTG +
Preference number: 2 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWTLGHL*LRCILL
Trigger: CAGCAGTATGCATCTCAGGCACAAATGGCCCAGGGT...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR TCA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGAGTGTTTTGAGCAAGTaGGCCCGGTCAGCTGAAGAA +
Preference number: 2 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWSVLSK*ARSAEE
Trigger: TTCTTCAGCTGACCGGGCTCACTTGCTCAAAACACT...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
3UTR-3UTR GCA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGAGGGTTGCTCATAGTTaGTGGCATACCACTAGGAGC +
Preference number: 2 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWRVAHS*WHTTRS
Trigger: GCTCCTAGTGGTATGCCAGCAACTATGAGCAACCCT...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR GCA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGAAACTGCTGTGCATTTaGCTGGGGAATCCGAGGGTT +
Preference number: 2 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWKLLCI*LGNPRV
Trigger: AACCCTCGGATTCCCCAGGCAAATGCACAGCAGTTT...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR GCA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGGGTTCATGCTGCTCATaGCACCTGTGTTGGTCGCCA +
Preference number: 2 (lower is better)
Translates to: VVISAINLNTLAFSPILEGSCCS*HLCWSP
Trigger: TGGCGACCAACACAGGTGGCATGAGCAGCATGAACC...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR CCA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGAAGGCCAGATACAGCTaGTCCAGGAGAGCTCCCTCA +
Preference number: 2 (lower is better)
Translates to: VVISAINLNTLAFSPILEKARYS*SRRAPS
Trigger: TGAGGGAGCTCTCCTGGACCAGCTGTATCTGGCCTT...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR CCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATAGTTTGGATCTTGCATaGGAGAATAGCTACCCTGGG +
Preference number: 2 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHSLDLA*ENSYPG
Trigger: CCCAGGGTAGCTATTCTCCCATGCAAGATCCAAACT...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR CCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATGAGACTGTTGCATCATaGGACTCTGTGTATGTGCCA +
Preference number: 2 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHETVAS*DSVYVP
Trigger: TGGCACATACACAGAGTCCCATGATGCAACAGTCTC...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CAA 90 bp TCTCATCATCAAAGTTCGTTGCTGAACTTGCTGTTGCTGATGCATTaGTCTCTGTCGAAGATGCTGGTTCAGGATTTCCCTCTGTCTCTG +
Preference number: 2 (lower is better)
Translates to: SHHQSSLLNLLLLMH*SLSKMLVQDFPLSL
Trigger: CAGAGACAGAGGGAAATCCTGAACCAGCATCTTCGACAGAGACAAATGCATCAGCAACAGCAAGTTCAGCAACGAACTTTGATGATGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CAA 90 bp CAACCCTTGTCCTCTCATCATCAAAGTTCGTTGCTGAACTTGCTGTaGCTGATGCATTTGTCTCTGTCGAAGATGCTGGTTCAGGATTTC +
Preference number: 2 (lower is better)
Translates to: QPLSSHHQSSLLNLL*LMHLSLSKMLVQDF
Trigger: GAAATCCTGAACCAGCATCTTCGACAGAGACAAATGCATCAGCAACAGCAAGTTCAGCAACGAACTTTGATGATGAGAGGACAAGGGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR TCA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGCTAGAGATACGACTGTaGCTTTGTTGGTCTTCACGC +
Preference number: 2 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWLEIRL*LCWSSR
Trigger: GCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAG...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
3UTR-3UTR TCA 90 bp ATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCAAAGTGCGCTGTCCCATGGTGTaGAAGTTTGGATCTTGCATG +
Preference number: 2 (lower is better)
Translates to: IDVHVVTVHAGVCLLPKVRCPMV*KFGSCM
Trigger: CATGCAAGATCCAAACTTTCACACCATGGGACAGCG...CACTTTGGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR GCA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGGAGCGACTGTCTGGATaGGAGCTTCAGACTGTCAAG +
Preference number: 2 (lower is better)
Translates to: VVISAINLNTLAFSPILEERLSG*ELQTVK
Trigger: CTTGACAGTCTGAAGCTCGCATCCAGACAGTCGCTC...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
3UTR-3UTR GCA 90 bp ATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCAAAGTGCTGGGCCAGCATCTGTaGATTAATAGGTGCCTGTGT +
Preference number: 2 (lower is better)
Translates to: IDVHVVTVHAGVCLLPKVLGQHL*INRCLC
Trigger: ACACAGGCACCTATTAATGCACAGATGCTGGCCCAG...CACTTTGGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR CCA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGTCTAGCAGAACCGGCTaGCAGGTCAGTTGGGTTGAA +
Preference number: 2 (lower is better)
Translates to: VVISAINLNTLAFSPILESSRTG*QVSWVE
Trigger: TTCAACCCAACTGACCTGCCAGCCGGTTCTGCTAGA...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
3UTR CAA 90 bp CATATTCAACCCTTGTCCTCTCATCATCAAAGTTCGTTGCTGAACTaGCTGTTGCTGATGCATTTGTCTCTGTCGAAGATGCTGGTTCAG +
Preference number: 2 (lower is better)
Translates to: HIQPLSSHHQSSLLN*LLLMHLSLSKMLVQ
Trigger: CTGAACCAGCATCTTCGACAGAGACAAATGCATCAGCAACAGCAAGTTCAGCAACGAACTTTGATGATGAGAGGACAAGGGTTGAATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CAA 90 bp GCTTGGTGTCATATTCAACCCTTGTCCTCTCATCATCAAAGTTCGTaGCTGAACTTGCTGTTGCTGATGCATTTGTCTCTGTCGAAGATG +
Preference number: 2 (lower is better)
Translates to: AWCHIQPLSSHHQSS*LNLLLLMHLSLSKM
Trigger: CATCTTCGACAGAGACAAATGCATCAGCAACAGCAAGTTCAGCAACGAACTTTGATGATGAGAGGACAAGGGTTGAATATGACACCAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR TCA 90 bp CATATAAATTGGATTTTATGTACCTTACAAAACTTCGGCTTAGTCAGCACTGCTGTGAGCCCGGTCAGCTaGAGAAGCAACTGGCTTCAG +
Preference number: 2 (lower is better)
Translates to: HINWILCTLQNFGLVSTAVSPVS*RSNWLQ
Trigger: CTGAAGCCAGTTGCTTCTTCAGCTGACCGGGCTCAC...AGCAGTGCTGACTAAGCCGAAGTTTTGTAAGGTACATAAAATCCAATTTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
3UTR-3UTR TCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATGAAACATTGCTGATTTaGTTCATAAGTGGCTGGCGA +
Preference number: 2 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHETLLI*FISGWR
Trigger: TCGCCAGCCACTTATGAATCAAATCAGCAATGTTTC...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR CCA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGCTGGCAAAAGACGCCTaGTCTATAGGCAGGATGCTT +
Preference number: 2 (lower is better)
Translates to: VVISAINLNTLAFSPILELAKDA*SIGRML
Trigger: AAGCATCCTGCCTATAGACCAGGCGTCTTTTGCCAG...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR CCA 90 bp ATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCAAAGTGAGCCCCAGTAAAGCCTaGATCAGGTTGCTGACTTAT +
Preference number: 2 (lower is better)
Translates to: IDVHVVTVHAGVCLLPKVSPSKA*IRLLTY
Trigger: ATAAGTCAGCAACCTGATCCAGGCTTTACTGGGGCT...CACTTTGGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR GCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATGGTTCCTACAGCGGCTaGATATCATATAGATTAGAT +
Preference number: 2 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHGSYSG*ISYRLD
Trigger: ATCTAATCTATATGATATGCAGCCGCTGTAGGAACC...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
3UTR-3UTR GCA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTGGTTCCTACAGCGGCTaGATATCATATAGATTAGAT +
Preference number: 2 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVGSYSG*ISYRLD
Trigger: ATCTAATCTATATGATATGCAGCCGCTGTAGGAACC...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
3UTR-3UTR CCA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGATGCTTTCAGGCCATaGGGCAGTCTGATTTGGAGG +
Preference number: 2 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFDAFRP*GSLIWR
Trigger: CCTCCAAATCAGACTGCCCCATGGCCTGAAAGCATC...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CAA 90 bp GTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTaGGAGGCCAGAGTTGCTGGGGAACAGAATAAACATGCTTCCAAA +
Preference number: 2 (lower is better)
Translates to: VISAINLNTLAFSPI*EARVAGEQNKHASK
Trigger: TTTGGAAGCATGTTTATTCTGTTCCCCAGCAACTCTGGCCTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
3UTR-3UTR GCA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGCATTTGTGCCTGAGATaGATACTGCTGTGGGAAAAC +
Preference number: 2 (lower is better)
Translates to: VVISAINLNTLAFSPILEHLCLR*ILLWEN
Trigger: GTTTTCCCACAGCAGTATGCATCTCAGGCACAAATG...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR CCA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTAGACTCTTTCCAACATaGTCTTTAGAGCTTTCTAGA +
Preference number: 2 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVRLFPT*SLELSR
Trigger: TCTAGAAAGCTCTAAAGACCATGTTGGAAAGAGTCT...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
3UTR-3UTR CCA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTTGGGGCAGTCTGATTTaGAGGAGCTTGTTGTTGGCT +
Preference number: 2 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFWGSLI*RSLLLA
Trigger: AGCCAACAACAAGCTCCTCCAAATCAGACTGCCCCA...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR GCA 90 bp ACTGCTCACACTAGAAATACAAACATCAATGCAGGTGAACAAAGTGATGTTCAGCTGCAAGTGGATCTGTaGCACCCATTTCATGTGTTA +
Preference number: 2 (lower is better)
Translates to: TAHTRNTNINAGEQSDVQLQVDL*HPFHVL
Trigger: TAACACATGAAATGGGTGGCACAGATCCACTTGCAG...CTGAACATCACTTTGTTCACCTGCATTGATGTTTGTATTTCTAGTGTGAGCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
3UTR-3UTR CCA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTATAAAAATCAAGAATTaGTTCCTACAGCGGCTGCAT +
Preference number: 2 (lower is better)
Translates to: KVEPFEGIYELVATEKCCIKIKN*FLQRLH
Trigger: ATGCAGCCGCTGTAGGAACCAATTCTTGATTTTTAT...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452400.7
3UTR-3UTR CCA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGGGATATATGAACTGGTaGCCACTGAGAAGTGTTGTT +
Preference number: 2 (lower is better)
Translates to: VVISAINLNTLAFSPILEGYMNW*PLRSVV
Trigger: AACAACACTTCTCAGTGGCCACCAGTTCATATATCC...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
3UTR-3UTR GCA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTAAAATCTTAATCTTTTaGACTAGACTGTTAGCCAGG +
Preference number: 2 (lower is better)
Translates to: KVEPFEGIYELVATEKCCKILIF*TRLLAR
Trigger: CCTGGCTAACAGTCTAGTGCAAAAGATTAAGATTTT...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000452400.7
3UTR-3UTR CCA 90 bp CATATAAATTGGATTTTATGTACCTTACAAAACTTCGGCTTAGTCAGCACTGCTGGCTGGCAGGTCAGTTaGGTTGAAACAAATAGACAC +
Preference number: 2 (lower is better)
Translates to: HINWILCTLQNFGLVSTAGWQVS*VETNRH
Trigger: GTGTCTATTTGTTTCAACCCAACTGACCTGCCAGCC...AGCAGTGCTGACTAAGCCGAAGTTTTGTAAGGTACATAAAATCCAATTTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
3UTR-3UTR CCA 90 bp TGCTTCTATAGTGATCAATATGATCAGAGGATTCCTTCACTTACTTTTCTTCTCAGAAGTGTTGTTCCTTaGCCACCTCCCTGTATTGAG +
Preference number: 2 (lower is better)
Translates to: CFYSDQYDQRIPSLTFLLRSVVP*PPPCIE
Trigger: CTCAATACAGGGAGGTGGCCAAGGAACAACACTTCT...GAGAAGAAAAGTAAGTGAAGGAATCCTCTGATCATATTGATCACTATAGAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
3UTR-3UTR CCA 90 bp CATATAAATTGGATTTTATGTACCTTACAAAACTTCGGCTTAGTCAGCACTGCTCAAGAAACCAGTGTCTaGAACCGAACAGGAACAGAA +
Preference number: 2 (lower is better)
Translates to: HINWILCTLQNFGLVSTAQETSV*NRTGTE
Trigger: TTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTG...AGCAGTGCTGACTAAGCCGAAGTTTTGTAAGGTACATAAAATCCAATTTATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
3UTR-3UTR TCA 90 bp ACTGCTCACACTAGAAATACAAACATCAATGCAGGTGAACAAAGTGATGTTCAGAATCTGACATGGGTATaGAATTTGCCTGTCAACATT +
Preference number: 2 (lower is better)
Translates to: TAHTRNTNINAGEQSDVQNLTWV*NLPVNI
Trigger: AATGTTGACAGGCAAATTTCATACCCATGTCAGATT...CTGAACATCACTTTGTTCACCTGCATTGATGTTTGTATTTCTAGTGTGAGCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
3UTR-3UTR CCA 90 bp CATATAAATTGGATTTTATGTACCTTACAAAACTTCGGCTTAGTCAGCACTGCTCATCTGTTCAGTAACTaGAGACTCTTTCCAACATGG +
Preference number: 2 (lower is better)
Translates to: HINWILCTLQNFGLVSTAHLFSN*RLFPTW
Trigger: CCATGTTGGAAAGAGTCTCCAGTTACTGAACAGATG...AGCAGTGCTGACTAAGCCGAAGTTTTGTAAGGTACATAAAATCCAATTTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
3UTR-3UTR CCA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTCATGGTGTGAAAGTTTaGATCTTGCATGGGAGAATA +
Preference number: 2 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFHGVKV*ILHGRI
Trigger: TATTCTCCCATGCAAGATCCAAACTTTCACACCATG...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CAA 90 bp ACATCAATGCAGGTGAACAAAGTGATGTTCAGAGTCAACTCCATTTaGAAAATAAATCACAACCTGAAACACTGTAAGCTTTCTCCTGAA +
Preference number: 2 (lower is better)
Translates to: TSMQVNKVMFRVNSI*KINHNLKHCKLSPE
Trigger: TTCAGGAGAAAGCTTACAGTGTTTCAGGTTGTGATTTATTTTCAAAATGGAGTTGACTCTGAACATCACTTTGTTCACCTGCATTGATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
3UTR-3UTR GCA 90 bp TGCTTCTATAGTGATCAATATGATCAGAGGATTCCTTCACTTACTTTTCTTCTCACCATAAAAGTGGCCTaGTTAGTAACATGTAGTCTT +
Preference number: 2 (lower is better)
Translates to: CFYSDQYDQRIPSLTFLLTIKVA*LVTCSL
Trigger: AAGACTACATGTTACTAAGCAGGCCACTTTTATGGT...GAGAAGAAAAGTAAGTGAAGGAATCCTCTGATCATATTGATCACTATAGAAGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
3UTR CCA 72 bp GCAGCTCCTCCTGCCACAGCCGAGTGGACGCCACCCTaGGAACCAGGGCCAGGCCTGTCTGCTCTAGCAGAA +
Preference number: 3 (lower is better)
Translates to: AAPPATAEWTPP*EPGPGLSALAE
Trigger: TTCTGCTAGAGCAGACAGGCCTGGCCCTGGTTCCCAGGGTGGCGTCCACTCGGCTGTGGCAGGAGGAGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
3UTR-3UTR CAA 90 bp GCGCCCATCCATTTATGTCGGAGGGGGCCTGATAGGCTGGGTTGGCCTGAGACTATGGGGCAGTCTGATTaGGAGGAGCTTGTTGTTGGC +
Preference number: 3 (lower is better)
Translates to: APIHLCRRGPDRLGWPETMGQSD*EELVVG
Trigger: GCCAACAACAAGCTCCTCCAAATCAGACTGCCCCAT...AGTCTCAGGCCAACCCAGCCTATCAGGCCCCCTCCGACATAAATGGATGGGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR CAA 90 bp GCGCCCATCCATTTATGTCGGAGGGGGCCTGATAGGCTGGGTTGGCCTGAGACTAAATGGCTGCCTGTTTaGGCTGGCAAAAGACGCCTG +
Preference number: 3 (lower is better)
Translates to: APIHLCRRGPDRLGWPETKWLPV*AGKRRL
Trigger: CAGGCGTCTTTTGCCAGCCAAAACAGGCAGCCATTT...AGTCTCAGGCCAACCCAGCCTATCAGGCCCCCTCCGACATAAATGGATGGGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR CAA 90 bp GAGGACAGCCCTGACGTAGGCACGGAGGTCACTGAGGTCATGCTGATCTGTCCTGCGATTCTGCTGTGCTaGGAGGCGATGCTGAAGTTG +
Preference number: 3 (lower is better)
Translates to: EDSPDVGTEVTEVMLICPAILLC*EAMLKL
Trigger: CAACTTCAGCATCGCCTCCAAGCACAGCAGAATCGC...AGGACAGATCAGCATGACCTCAGTGACCTCCGTGCCTACGTCAGGGCTGTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CCA 72 bp CGCCCATCCATTTATGTCGGAGGGGGCCTGATAGGCTaGGTTGGCCTGAGACTGTTGCATCATGGGACTCTG +
Preference number: 3 (lower is better)
Translates to: RPSIYVGGGLIG*VGLRLLHHGTL
Trigger: CAGAGTCCCATGATGCAACAGTCTCAGGCCAACCCAGCCTATCAGGCCCCCTCCGACATAAATGGATGGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR GCA 72 bp GGGAGAATAGCTACCCTGGGCCATTTGTGCCTGAGATaGATACTGCTGTGGGAAAACGGGCGCCTTCTGCTC +
Preference number: 3 (lower is better)
Translates to: GRIATLGHLCLR*ILLWENGRLLL
Trigger: GAGCAGAAGGCGCCCGTTTTCCCACAGCAGTATGCATCTCAGGCACAAATGGCCCAGGGTAGCTATTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR GCA 72 bp CTGGTGTTTGCTTGCTGCCCAAAGTGTGGTGGGGACTaGTGGGAAAACATGCTGTTTCCGCCCATGTTCCCC +
Preference number: 3 (lower is better)
Translates to: LVFACCPKCGGD*WENMLFPPMFP
Trigger: GGGGAACATGGGCGGAAACAGCATGTTTTCCCAGCAGTCCCCACCACACTTTGGGCAGCAAGCAAACACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CCA 72 bp ACCAGGGCCAGGCCTGTCTGCTCTAGCAGAACCGGCTaGCAGGTCAGTTGGGTTGAAACAAATAGACACAGC +
Preference number: 3 (lower is better)
Translates to: TRARPVCSSRTG*QVSWVETNRHS
Trigger: GCTGTGTCTATTTGTTTCAACCCAACTGACCTGCCAGCCGGTTCTGCTAGAGCAGACAGGCCTGGCCCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
3UTR CCA 72 bp AGGCAGGATGCTTTCAGGCCATGGGGCAGTCTGATTTaGAGGAGCTTGTTGTTGGCTATACTGAGGTCCCCC +
Preference number: 3 (lower is better)
Translates to: RQDAFRPWGSLI*RSLLLAILRSP
Trigger: GGGGGACCTCAGTATAGCCAACAACAAGCTCCTCCAAATCAGACTGCCCCATGGCCTGAAAGCATCCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CCA 72 bp TCCAGGCCATCAAAATTCCGCAAGGCCAGATACAGCTaGTCCAGGAGAGCTCCCTCATCACTCGGAGACTCA +
Preference number: 3 (lower is better)
Translates to: SRPSKFRKARYS*SRRAPSSLGDS
Trigger: TGAGTCTCCGAGTGATGAGGGAGCTCTCCTGGACCAGCTGTATCTGGCCTTGCGGAATTTTGATGGCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CCA 72 bp ACCCTGGGCCATTTGTGCCTGAGATGCATACTGCTGTaGGAAAACGGGCGCCTTCTGCTCCAGCATGATGTT +
Preference number: 3 (lower is better)
Translates to: TLGHLCLRCILL*ENGRLLLQHDV
Trigger: AACATCATGCTGGAGCAGAAGGCGCCCGTTTTCCCACAGCAGTATGCATCTCAGGCACAAATGGCCCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CCA 72 bp TGTGTATGTGCCATTCGGGGTGACATAAGTGGGCTCTaGGGAGTCGTAGCCCCAGTAAAGCCTGGATCAGGT +
Preference number: 3 (lower is better)
Translates to: CVCAIRGDISGL*GVVAPVKPGSG
Trigger: ACCTGATCCAGGCTTTACTGGGGCTACGACTCCCCAGAGCCCACTTATGTCACCCCGAATGGCACATACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR CAA 90 bp GCGCCCATCCATTTATGTCGGAGGGGGCCTGATAGGCTGGGTTGGCCTGAGACTAAAGCCTGGATCAGGTaGCTGACTTATTCCGTAGTT +
Preference number: 3 (lower is better)
Translates to: APIHLCRRGPDRLGWPETKAWIR*LTYSVV
Trigger: AACTACGGAATAAGTCAGCAACCTGATCCAGGCTTT...AGTCTCAGGCCAACCCAGCCTATCAGGCCCCCTCCGACATAAATGGATGGGCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR GCA 72 bp TGCATTTGCCTGGGGAATCCGAGGGTTGCTCATAGTTaGTGGCATACCACTAGGAGCCACCATGCTTGGTGT +
Preference number: 3 (lower is better)
Translates to: CICLGNPRVAHS*WHTTRSHHAWC
Trigger: ACACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCCTCGGATTCCCCAGGCAAATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CCA 72 bp AGACGCCTGGTCTATAGGCAGGATGCTTTCAGGCCATaGGGCAGTCTGATTTGGAGGAGCTTGTTGTTGGCT +
Preference number: 3 (lower is better)
Translates to: RRLVYRQDAFRP*GSLIWRSLLLA
Trigger: AGCCAACAACAAGCTCCTCCAAATCAGACTGCCCCATGGCCTGAAAGCATCCTGCCTATAGACCAGGCGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CCA 72 bp GCCGCTGTCCCATGGTGTGAAAGTTTGGATCTTGCATaGGAGAATAGCTACCCTGGGCCATTTGTGCCTGAG +
Preference number: 3 (lower is better)
Translates to: AAVPWCESLDLA*ENSYPGPFVPE
Trigger: CTCAGGCACAAATGGCCCAGGGTAGCTATTCTCCCATGCAAGATCCAAACTTTCACACCATGGGACAGCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CCA 72 bp AAGTGGGCTCTGGGGAGTCGTAGCCCCAGTAAAGCCTaGATCAGGTTGCTGACTTATTCCGTAGTTTGGAGG +
Preference number: 3 (lower is better)
Translates to: KWALGSRSPSKA*IRLLTYSVVWR
Trigger: CCTCCAAACTACGGAATAAGTCAGCAACCTGATCCAGGCTTTACTGGGGCTACGACTCCCCAGAGCCCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR CAA 90 bp CGTGATATGAAGCCACTGGGTTGCTTCTCCTTGGGCACTCACCTGCTCGGGACCTTGCTGAACTTGCTGTaGCTGATGCATTTGTCTCTG +
Preference number: 3 (lower is better)
Translates to: RDMKPLGCFSLGTHLLGTLLNLL*LMHLSL
Trigger: CAGAGACAAATGCATCAGCAACAGCAAGTTCAGCAA...GGTCCCGAGCAGGTGAGTGCCCAAGGAGAAGCAACCCAGTGGCTTCATATCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR TCA 72 bp ACGGGCGCCTTCTGCTCCAGCATGATGTTGGAATCCTaGCTTGAGAACTGTTCTGGATCTACTGCTTGGCTC +
Preference number: 3 (lower is better)
Translates to: TGAFCSSMMLES*LENCSGSTAWL
Trigger: GAGCCAAGCAGTAGATCCAGAACAGTTCTCAAGTCAGGATTCCAACATCATGCTGGAGCAGAAGGCGCCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CCA 72 bp GGCATAACTAGGCCGCTGTCCCATGGTGTGAAAGTTTaGATCTTGCATGGGAGAATAGCTACCCTGGGCCAT +
Preference number: 3 (lower is better)
Translates to: GITRPLSHGVKV*ILHGRIATLGH
Trigger: ATGGCCCAGGGTAGCTATTCTCCCATGCAAGATCCAAACTTTCACACCATGGGACAGCGGCCTAGTTATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CCA 72 bp ATTTGCCTGGGGAATCCGAGGGTTGCTCATAGTTGCTaGCATACCACTAGGAGCCACCATGCTTGGTGTCAT +
Preference number: 3 (lower is better)
Translates to: ICLGNPRVAHSC*HTTRSHHAWCH
Trigger: ATGACACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCCTCGGATTCCCCAGGCAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR CAA 90 bp GAGGACAGCCCTGACGTAGGCACGGAGGTCACTGAGGTCATGCTGATCTGTCCTACATTGATGTTCATGTaGTTACTGTACATGCTGGTG +
Preference number: 3 (lower is better)
Translates to: EDSPDVGTEVTEVMLICPTLMFM*LLYMLV
Trigger: CACCAGCATGTACAGTAACAACATGAACATCAATGT...AGGACAGATCAGCATGACCTCAGTGACCTCCGTGCCTACGTCAGGGCTGTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR TCA 72 bp AACATTAAAACTGGTCACACTGAATTGTATGCCACATaGGCCTCAGCCCACGGGGAGGTCCTGGAGTTCTGG +
Preference number: 3 (lower is better)
Translates to: NIKTGHTELYAT*ASAHGEVLEFW
Trigger: CCAGAACTCCAGGACCTCCCCGTGGGCTGAGGCTCATGTGGCATACAATTCAGTGTGACCAGTTTTAATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
3UTR TCA 72 bp ACTGCTGTGGGAAAACGGGCGCCTTCTGCTCCAGCATaGTGTTGGAATCCTGACTTGAGAACTGTTCTGGAT +
Preference number: 3 (lower is better)
Translates to: TAVGKRAPSAPA*CWNPDLRTVLD
Trigger: ATCCAGAACAGTTCTCAAGTCAGGATTCCAACATCATGCTGGAGCAGAAGGCGCCCGTTTTCCCACAGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CCA 72 bp TATATGAACTGGTGGCCACTGAGAAGTGTTGTTCCTTaGCCACCTCCCTGTATTGAGACCCCTCTCAAGTGG +
Preference number: 3 (lower is better)
Translates to: YMNWWPLRSVVP*PPPCIETPLKW
Trigger: CCACTTGAGAGGGGTCTCAATACAGGGAGGTGGCCAAGGAACAACACTTCTCAGTGGCCACCAGTTCATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
3UTR-3UTR CAA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTGCGTTTTCTCCCATTTaGGAGGCCAGAGTTGCTGGG +
Preference number: 3 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVAFSPI*EARVAG
Trigger: CCCAGCAACTCTGGCCTCCAAAATGGGAGAAAACGC...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
3UTR-3UTR CAA 90 bp GGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTGTCATAGAAGTCTTAGTTGATTaGGCTGGTTCTGCACTAGGC +
Preference number: 3 (lower is better)
Translates to: GLLIVAGIPLGATMLGVIEVLVD*AGSALG
Trigger: GCCTAGTGCAGAACCAGCCAAATCAACTAAGACTTC...TATGACACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR CAA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGCTGGGTTGCTTCTCCTaGGGCACTCACCTGCTCGGG +
Preference number: 3 (lower is better)
Translates to: VVISAINLNTLAFSPILELGCFS*GTHLLG
Trigger: CCCGAGCAGGTGAGTGCCCAAGGAGAAGCAACCCAG...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR CAA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGTGGAGGAGCTTGTTGTaGGCTATACTGAGGTCCCCC +
Preference number: 3 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWWRSLL*AILRSP
Trigger: GGGGGACCTCAGTATAGCCAACAACAAGCTCCTCCA...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR CAA 90 bp ATCCGAGGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTTGTTGGAATCCTGACTaGAGAACTGTTCTGGATCTA +
Preference number: 3 (lower is better)
Translates to: IRGLLIVAGIPLGATMLGCWNPD*RTVLDL
Trigger: TAGATCCAGAACAGTTCTCAAGTCAGGATTCCAACA...ACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCCTCGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR CAA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGGCTACCCTGGGCCATTaGTGCCTGAGATGCATACTG +
Preference number: 3 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWATLGH*CLRCIL
Trigger: CAGTATGCATCTCAGGCACAAATGGCCCAGGGTAGC...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR GCA 72 bp ATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTaGTGCCCAAAGTGTGGTGGGGACTGCTGGGAAAAC +
Preference number: 3 (lower is better)
Translates to: MFMLLLYMLVFA*CPKCGGDCWEN
Trigger: GTTTTCCCAGCAGTCCCCACCACACTTTGGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR GCA 72 bp ATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTaGTTGCTGCCCAAAGTGTGGTGGGGACTGCTGGGA +
Preference number: 3 (lower is better)
Translates to: IDVHVVTVHAGV*LLPKVWWGLLG
Trigger: TCCCAGCAGTCCCCACCACACTTTGGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CCA 72 bp ATCAGGTTGCTGACTTATTCCGTAGTTTGGAGGAAATaGAAACTGCTGTGCATTTGCCTGGGGAATCCGAGG +
Preference number: 3 (lower is better)
Translates to: IRLLTYSVVWRK*KLLCICLGNPR
Trigger: CCTCGGATTCCCCAGGCAAATGCACAGCAGTTTCCATTTCCTCCAAACTACGGAATAAGTCAGCAACCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR CAA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTACGACTGTGACTTTGTaGGTCTTCACGCACTGGGTG +
Preference number: 3 (lower is better)
Translates to: KVEPFEGIYELVATEKCCTTVTL*VFTHWV
Trigger: CACCCAGTGCGTGAAGACCAACAAAGTCACAGTCGT...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
3UTR-3UTR CAA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACATTCTGGATCTACTGCTaGGCTCTGGCTGACCAGTTC +
Preference number: 3 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTFWIYC*ALADQF
Trigger: GAACTGGTCAGCCAGAGCCAAGCAGTAGATCCAGAA...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR CAA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATTGTACATGCTGGTGTTaGCTTGCTGCCCAAAGTGTG +
Preference number: 3 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHCTCWC*LAAQSV
Trigger: CACACTTTGGGCAGCAAGCAAACACCAGCATGTACA...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR TCA 72 bp TGCTCATGCCACCTGTGTTGGTCGCCATGGACACATTaGTGTTCATGTTGTTACTGTACATGCTGGTGTTTG +
Preference number: 3 (lower is better)
Translates to: CSCHLCWSPWTH*CSCCYCTCWCL
Trigger: CAAACACCAGCATGTACAGTAACAACATGAACATCAATGTGTCCATGGCGACCAACACAGGTGGCATGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR GCA 72 bp ACTTATTCCGTAGTTTGGAGGAAATGGAAACTGCTGTaGATTTGCCTGGGGAATCCGAGGGTTGCTCATAGT +
Preference number: 3 (lower is better)
Translates to: TYSVVWRKWKLL*ICLGNPRVAHS
Trigger: ACTATGAGCAACCCTCGGATTCCCCAGGCAAATGCACAGCAGTTTCCATTTCCTCCAAACTACGGAATAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CCA 72 bp GTTCACATTGGAAACATTGCTGATTTGATTCATAAGTaGCTGGCGATTCTGCTGTGCTTGGAGGCGATGCTG +
Preference number: 3 (lower is better)
Translates to: VHIGNIADLIHK*LAILLCLEAML
Trigger: CAGCATCGCCTCCAAGCACAGCAGAATCGCCAGCCACTTATGAATCAAATCAGCAATGTTTCCAATGTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR CAA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACAGGCAGGTCAGTTGGGTaGAAACAAATAGACACAGCT +
Preference number: 3 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTGRSVG*KQIDTA
Trigger: AGCTGTGTCTATTTGTTTCAACCCAACTGACCTGCC...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
3UTR-3UTR CAA 90 bp GGACACATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCAGTTCGTTGCTGAACTaGCTGTTGCTGATGCATTTG +
Preference number: 3 (lower is better)
Translates to: GHIDVHVVTVHAGVCLLPSSLLN*LLLMHL
Trigger: CAAATGCATCAGCAACAGCAAGTTCAGCAACGAACT...GGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAATGTGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR CAA 90 bp GGACACATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCCATCATCAAAGTTCGTaGCTGAACTTGCTGTTGCTG +
Preference number: 3 (lower is better)
Translates to: GHIDVHVVTVHAGVCLLPHHQSS*LNLLLL
Trigger: CAGCAACAGCAAGTTCAGCAACGAACTTTGATGATG...GGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAATGTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CCA 72 bp GCCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTaGAGACTCTTTCCAACATGGTCTTTAGAGCTTTCT +
Preference number: 3 (lower is better)
Translates to: ALSQAPFHLFSN*RLFPTWSLELS
Trigger: AGAAAGCTCTAAAGACCATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
3UTR-3UTR CAA 90 bp ATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCAAAGTGATTTGGAGGAGCTTGTaGTTGGCTATACTGAGGTCC +
Preference number: 3 (lower is better)
Translates to: IDVHVVTVHAGVCLLPKVIWRSL*LAILRS
Trigger: GGACCTCAGTATAGCCAACAACAAGCTCCTCCAAAT...CACTTTGGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR TCA 72 bp CTCAGAGTCAAGTTCACATTGGAAACATTGCTGATTTaGTTCATAAGTGGCTGGCGATTCTGCTGTGCTTGG +
Preference number: 3 (lower is better)
Translates to: LRVKFTLETLLI*FISGWRFCCAW
Trigger: CCAAGCACAGCAGAATCGCCAGCCACTTATGAATCAAATCAGCAATGTTTCCAATGTGAACTTGACTCTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR GCA 72 bp CTGATTGTGTATCTTTGGGTTCTGCAAGTGGATCTGTaGCACCCATTTCATGTGTTAAGCCCATATGAACTC +
Preference number: 3 (lower is better)
Translates to: LIVYLWVLQVDL*HPFHVLSPYEL
Trigger: GAGTTCATATGGGCTTAACACATGAAATGGGTGGCACAGATCCACTTGCAGAACCCAAAGATACACAATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
3UTR-3UTR CAA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGGGCAGGTCAGTTGGGTaGAAACAAATAGACACAGCT +
Preference number: 3 (lower is better)
Translates to: VVISAINLNTLAFSPILEGRSVG*KQIDTA
Trigger: AGCTGTGTCTATTTGTTTCAACCCAACTGACCTGCC...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
3UTR-3UTR CAA 90 bp ATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCAAAGTGCCATGGTGTGAAAGTTaGGATCTTGCATGGGAGAAT +
Preference number: 3 (lower is better)
Translates to: IDVHVVTVHAGVCLLPKVPWCES*DLAWEN
Trigger: ATTCTCCCATGCAAGATCCAAACTTTCACACCATGG...CACTTTGGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR GCA 72 bp CGAAGCCACTACAGTAATTTTCTTTTGTGCAGAGGATaGTTTGCTCTTAGGCAGCATACCACCATACAAACA +
Preference number: 3 (lower is better)
Translates to: RSHYSNFLLCRG*FALRQHTTIQT
Trigger: TGTTTGTATGGTGGTATGCTGCCTAAGAGCAAAGCATCCTCTGCACAAAAGAAAATTACTGTAGTGGCTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
3UTR-3UTR CAA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGTTCTTGGTATTGGAGTaGTCTGAAACTGACACCTAT +
Preference number: 3 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWFLVLE*SETDTY
Trigger: ATAGGTGTCAGTTTCAGACAACTCCAATACCAAGAA...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
3UTR-3UTR CAA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTAAGGTCATCAGTTTCTaGGTATTGGAGTTGTCTGAA +
Preference number: 3 (lower is better)
Translates to: KVEPFEGIYELVATEKCCKVISF*VLELSE
Trigger: TTCAGACAACTCCAATACCAAGAAACTGATGACCTT...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
3UTR-3UTR CAA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATACTTACCATCTATCTTaGGGCTATATCTCTTCCTAT +
Preference number: 3 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHTYHLS*GYISSY
Trigger: ATAGGAAGAGATATAGCCCAAAGATAGATGGTAAGT...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
3UTR-3UTR CAA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGTGTCAACATTTACTTTaGCAGGAGAGATCTAAGTTG +
Preference number: 3 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWCQHLL*QERSKL
Trigger: CAACTTAGATCTCTCCTGCAAAAGTAAATGTTGACA...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
3UTR-3UTR CAA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGGGTCTAATCAAGGCATaGATATCCTTTACAAAACAC +
Preference number: 3 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWGLIKA*ISFTKH
Trigger: GTGTTTTGTAAAGGATATCAATGCCTTGATTAGACC...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
3UTR-3UTR CAA 90 bp CATATAAATTGGATTTTATGTACCTTACAAAACTTCGGCTTAGTCAGCACTGCTTTTTGGAGGCCAGAGTaGCTGGGGAACAGAATAAAC +
Preference number: 3 (lower is better)
Translates to: HINWILCTLQNFGLVSTAFWRPE*LGNRIN
Trigger: GTTTATTCTGTTCCCCAGCAACTCTGGCCTCCAAAA...AGCAGTGCTGACTAAGCCGAAGTTTTGTAAGGTACATAAAATCCAATTTATATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
3UTR CCA 72 bp TTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATaGTCTTTAGAGCTTTCTAGAGATACGACTGTGACT +
Preference number: 3 (lower is better)
Translates to: FHLFSNWRLFPT*SLELSRDTTVT
Trigger: AGTCACAGTCGTATCTCTAGAAAGCTCTAAAGACCATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
3UTR-3UTR CAA 90 bp ACTGCTCACACTAGAAATACAAACATCAATGCAGGTGAACAAAGTGATGTTCAGAGCATTTTGAGGTTCTaGCACATAGCTTTTACCTGT +
Preference number: 3 (lower is better)
Translates to: TAHTRNTNINAGEQSDVQSILRF*HIAFTC
Trigger: ACAGGTAAAAGCTATGTGCAAGAACCTCAAAATGCT...CTGAACATCACTTTGTTCACCTGCATTGATGTTTGTATTTCTAGTGTGAGCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
3UTR-3UTR CAA 90 bp ACTGCTCACACTAGAAATACAAACATCAATGCAGGTGAACAAAGTGATGTTCAGCTAGATTTTAGCATTTaGAGGTTCTTGCACATAGCT +
Preference number: 3 (lower is better)
Translates to: TAHTRNTNINAGEQSDVQLDFSI*RFLHIA
Trigger: AGCTATGTGCAAGAACCTCAAAATGCTAAAATCTAG...CTGAACATCACTTTGTTCACCTGCATTGATGTTTGTATTTCTAGTGTGAGCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
3UTR-3UTR CAA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTTGTCATATTCAACCCTaGTCCTCTCATCATCAAAGT +
Preference number: 3 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFCHIQP*SSHHQS
Trigger: ACTTTGATGATGAGAGGACAAGGGTTGAATATGACA...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR-3UTR CAA 90 bp TGCTTCTATAGTGATCAATATGATCAGAGGATTCCTTCACTTACTTTTCTTCTCCATGAAGTTGCGGATTaGTCTGAATTAGGATTGACA +
Preference number: 3 (lower is better)
Translates to: CFYSDQYDQRIPSLTFLLHEVAD*SELGLT
Trigger: TGTCAATCCTAATTCAGACAAATCCGCAACTTCATG...GAGAAGAAAAGTAAGTGAAGGAATCCTCTGATCATATTGATCACTATAGAAGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
3UTR-3UTR CAA 90 bp CATATAAATTGGATTTTATGTACCTTACAAAACTTCGGCTTAGTCAGCACTGCTTGTCAACATTTACTTTaGCAGGAGAGATCTAAGTTG +
Preference number: 3 (lower is better)
Translates to: HINWILCTLQNFGLVSTACQHLL*QERSKL
Trigger: CAACTTAGATCTCTCCTGCAAAAGTAAATGTTGACA...AGCAGTGCTGACTAAGCCGAAGTTTTGTAAGGTACATAAAATCCAATTTATATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp GAGGCAGCTCCTCCTGCCACAGCCGAGTGGACGCCACCCTGGGAACCAGGGCCAAGGGCCAGGCCTGTCTaGTCTAGCAGAACCGGCTGG +
Preference number: 4 (lower is better)
Translates to: EAAPPATAEWTPPWEPGPRARPV*SSRTGW
Trigger: CCAGCCGGTTCTGCTAGAGCAGACAGGCCTGGCCCT...TGGCCCTGGTTCCCAGGGTGGCGTCCACTCGGCTGTGGCAGGAGGAGCTGCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR TCA 90 bp GAGGCAGCTCCTCCTGCCACAGCCGAGTGGACGCCACCCTGGGAACCAGGGCCACCAGCATCCGACAATTaGAGGTATGGCTGTTCCGCC +
Preference number: 4 (lower is better)
Translates to: EAAPPATAEWTPPWEPGPPASDN*RYGCSA
Trigger: GGCGGAACAGCCATACCTTCAATTGTCGGATGCTGG...TGGCCCTGGTTCCCAGGGTGGCGTCCACTCGGCTGTGGCAGGAGGAGCTGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp GAGGCAGCTCCTCCTGCCACAGCCGAGTGGACGCCACCCTGGGAACCAGGGCCACATGGGGATGCTGGCTaGTGGGTTCCGAATCATACC +
Preference number: 4 (lower is better)
Translates to: EAAPPATAEWTPPWEPGPHGDAG*WVPNHT
Trigger: GGTATGATTCGGAACCCAGCAGCCAGCATCCCCATG...TGGCCCTGGTTCCCAGGGTGGCGTCCACTCGGCTGTGGCAGGAGGAGCTGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp GAGGCAGCTCCTCCTGCCACAGCCGAGTGGACGCCACCCTGGGAACCAGGGCCAAAGGCCAGATACAGCTaGTCCAGGAGAGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: EAAPPATAEWTPPWEPGPKARYS*SRRAPS
Trigger: TGAGGGAGCTCTCCTGGACCAGCTGTATCTGGCCTT...TGGCCCTGGTTCCCAGGGTGGCGTCCACTCGGCTGTGGCAGGAGGAGCTGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp GAGGCAGCTCCTCCTGCCACAGCCGAGTGGACGCCACCCTGGGAACCAGGGCCAGCCTGGTTTCATGGCTaGTCTCATGGTGCTGGTATC +
Preference number: 4 (lower is better)
Translates to: EAAPPATAEWTPPWEPGPAWFHG*SHGAGI
Trigger: GATACCAGCACCATGAGAGCAGCCATGAAACCAGGC...TGGCCCTGGTTCCCAGGGTGGCGTCCACTCGGCTGTGGCAGGAGGAGCTGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp GAGGCAGCTCCTCCTGCCACAGCCGAGTGGACGCCACCCTGGGAACCAGGGCCAATGCTGGTGTTTGCTTaGTGCCCAAAGTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: EAAPPATAEWTPPWEPGPMLVFA*CPKCGG
Trigger: CCCACCACACTTTGGGCAGCAAGCAAACACCAGCAT...TGGCCCTGGTTCCCAGGGTGGCGTCCACTCGGCTGTGGCAGGAGGAGCTGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp GAGGCAGCTCCTCCTGCCACAGCCGAGTGGACGCCACCCTGGGAACCAGGGCCACGACAATTGAAGGTATaGCTGTTCCGCCTCGGAGGT +
Preference number: 4 (lower is better)
Translates to: EAAPPATAEWTPPWEPGPRQLKV*LFRLGG
Trigger: ACCTCCGAGGCGGAACAGCCATACCTTCAATTGTCG...TGGCCCTGGTTCCCAGGGTGGCGTCCACTCGGCTGTGGCAGGAGGAGCTGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp GAGGCAGCTCCTCCTGCCACAGCCGAGTGGACGCCACCCTGGGAACCAGGGCCAGTGAAAGCATGGAGGTaGGCTGTCCTGGATTCATGC +
Preference number: 4 (lower is better)
Translates to: EAAPPATAEWTPPWEPGPVKAWR*AVLDSC
Trigger: GCATGAATCCAGGACAGCCCACCTCCATGCTTTCAC...TGGCCCTGGTTCCCAGGGTGGCGTCCACTCGGCTGTGGCAGGAGGAGCTGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp GAGGCAGCTCCTCCTGCCACAGCCGAGTGGACGCCACCCTGGGAACCAGGGCCATGCCCATTCTCCAGATaGCATAGTAGGCCGAGAAGC +
Preference number: 4 (lower is better)
Translates to: EAAPPATAEWTPPWEPGPCPFSR*HSRPRS
Trigger: GCTTCTCGGCCTACTATGCCATCTGGAGAATGGGCA...TGGCCCTGGTTCCCAGGGTGGCGTCCACTCGGCTGTGGCAGGAGGAGCTGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp GAGGCAGCTCCTCCTGCCACAGCCGAGTGGACGCCACCCTGGGAACCAGGGCCACGAATCATACCTCCTTaGACTGGCCGGTTCATGGCA +
Preference number: 4 (lower is better)
Translates to: EAAPPATAEWTPPWEPGPRIIPP*TGRFMA
Trigger: TGCCATGAACCGGCCAGTCCAAGGAGGTATGATTCG...TGGCCCTGGTTCCCAGGGTGGCGTCCACTCGGCTGTGGCAGGAGGAGCTGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR TCA 90 bp GAGGCAGCTCCTCCTGCCACAGCCGAGTGGACGCCACCCTGGGAACCAGGGCCATTGGCAGCAGGTTTTTaGCAAATTCCGTGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: EAAPPATAEWTPPWEPGPLAAGF*QIPCGP
Trigger: GGGACCACACGGAATTTGTCAAAAACCTGCTGCCAA...TGGCCCTGGTTCCCAGGGTGGCGTCCACTCGGCTGTGGCAGGAGGAGCTGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR TCA 90 bp GAGGCAGCTCCTCCTGCCACAGCCGAGTGGACGCCACCCTGGGAACCAGGGCCAAGTGTTTTGAGCAAGTaGGCCCGGTCAGCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: EAAPPATAEWTPPWEPGPSVLSK*ARSAEE
Trigger: TTCTTCAGCTGACCGGGCTCACTTGCTCAAAACACT...TGGCCCTGGTTCCCAGGGTGGCGTCCACTCGGCTGTGGCAGGAGGAGCTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp GAGGACAGCCCTGACGTAGGCACGGAGGTCACTGAGGTCATGCTGATCTGTCCTCGTCAGCTCTCTCACTaGTCACGGCCGGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: EDSPDVGTEVTEVMLICPRQLSH*SRPGAG
Trigger: ACCTGCCCCCGGCCGTGAGCAGTGAGAGAGCTGACG...AGGACAGATCAGCATGACCTCAGTGACCTCCGTGCCTACGTCAGGGCTGTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp GAGGCAGCTCCTCCTGCCACAGCCGAGTGGACGCCACCCTGGGAACCAGGGCCAAGGGTTGCTCATAGTTaGTGGCATACCACTAGGAGC +
Preference number: 4 (lower is better)
Translates to: EAAPPATAEWTPPWEPGPRVAHS*WHTTRS
Trigger: GCTCCTAGTGGTATGCCAGCAACTATGAGCAACCCT...TGGCCCTGGTTCCCAGGGTGGCGTCCACTCGGCTGTGGCAGGAGGAGCTGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp GAGGCAGCTCCTCCTGCCACAGCCGAGTGGACGCCACCCTGGGAACCAGGGCCATTGTCGATGACACCCTaGCCTGTAGAGGATACATCT +
Preference number: 4 (lower is better)
Translates to: EAAPPATAEWTPPWEPGPLSMTP*PVEDTS
Trigger: AGATGTATCCTCTACAGGGCAGGGTGTCATCGACAA...TGGCCCTGGTTCCCAGGGTGGCGTCCACTCGGCTGTGGCAGGAGGAGCTGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp GAGGCAGCTCCTCCTGCCACAGCCGAGTGGACGCCACCCTGGGAACCAGGGCCACAGGCAAGCTACCTGTaGAGTCTTTGTTTGTATCCG +
Preference number: 4 (lower is better)
Translates to: EAAPPATAEWTPPWEPGPQASYL*SLCLYP
Trigger: CGGATACAAACAAAGACTCCACAGGTAGCTTGCCTG...TGGCCCTGGTTCCCAGGGTGGCGTCCACTCGGCTGTGGCAGGAGGAGCTGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp GAGGCAGCTCCTCCTGCCACAGCCGAGTGGACGCCACCCTGGGAACCAGGGCCAGAGACTGTTGCATCATaGGACTCTGTGTATGTGCCA +
Preference number: 4 (lower is better)
Translates to: EAAPPATAEWTPPWEPGPETVAS*DSVYVP
Trigger: TGGCACATACACAGAGTCCCATGATGCAACAGTCTC...TGGCCCTGGTTCCCAGGGTGGCGTCCACTCGGCTGTGGCAGGAGGAGCTGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp GAGGCAGCTCCTCCTGCCACAGCCGAGTGGACGCCACCCTGGGAACCAGGGCCAAGAAGTGTTGTTCCTTaGCCACCTCCCTGTATTGAG +
Preference number: 4 (lower is better)
Translates to: EAAPPATAEWTPPWEPGPRSVVP*PPPCIE
Trigger: CTCAATACAGGGAGGTGGCCAAGGAACAACACTTCT...TGGCCCTGGTTCCCAGGGTGGCGTCCACTCGGCTGTGGCAGGAGGAGCTGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR GCA 90 bp GAGGCAGCTCCTCCTGCCACAGCCGAGTGGACGCCACCCTGGGAACCAGGGCCACTGCAAGTGGATCTGTaGCACCCATTTCATGTGTTA +
Preference number: 4 (lower is better)
Translates to: EAAPPATAEWTPPWEPGPLQVDL*HPFHVL
Trigger: TAACACATGAAATGGGTGGCACAGATCCACTTGCAG...TGGCCCTGGTTCCCAGGGTGGCGTCCACTCGGCTGTGGCAGGAGGAGCTGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp CGTGATATGAAGCCACTGGGTTGCTTCTCCTTGGGCACTCACCTGCTCGGGACCGGTCATGTCCTGACCTaGGTTCCCACTGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: RDMKPLGCFSLGTHLLGTGHVLT*VPTAQG
Trigger: GCCCTGTGCAGTGGGAACCCAGGTCAGGACATGACC...GGTCCCGAGCAGGTGAGTGCCCAAGGAGAAGCAACCCAGTGGCTTCATATCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp GCGCCCATCCATTTATGTCGGAGGGGGCCTGATAGGCTGGGTTGGCCTGAGACTGGGGATGCTGGCTGCTaGGTTCCGAATCATACCTCC +
Preference number: 4 (lower is better)
Translates to: APIHLCRRGPDRLGWPETGDAGC*VPNHTS
Trigger: GGAGGTATGATTCGGAACCCAGCAGCCAGCATCCCC...AGTCTCAGGCCAACCCAGCCTATCAGGCCCCCTCCGACATAAATGGATGGGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CAA 72 bp GGAGGGGGCCTGATAGGCTGGGTTGGCCTGAGACTGTaGCATCATGGGACTCTGTGTATGTGCCATTCGGGG +
Preference number: 4 (lower is better)
Translates to: GGGLIGWVGLRL*HHGTLCMCHSG
Trigger: CCCCGAATGGCACATACACAGAGTCCCATGATGCAACAGTCTCAGGCCAACCCAGCCTATCAGGCCCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR TCA 90 bp GAGGCAGCTCCTCCTGCCACAGCCGAGTGGACGCCACCCTGGGAACCAGGGCCAGAAACATTGCTGATTTaGTTCATAAGTGGCTGGCGA +
Preference number: 4 (lower is better)
Translates to: EAAPPATAEWTPPWEPGPETLLI*FISGWR
Trigger: TCGCCAGCCACTTATGAATCAAATCAGCAATGTTTC...TGGCCCTGGTTCCCAGGGTGGCGTCCACTCGGCTGTGGCAGGAGGAGCTGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp GCGCCCATCCATTTATGTCGGAGGGGGCCTGATAGGCTGGGTTGGCCTGAGACTACCTGCCCATGGGCATaGCCATTTGTTCCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: APIHLCRRGPDRLGWPETTCPWA*PFVPLG
Trigger: GCCCAAAGGAACAAATGGGCATGCCCATGGGCAGGT...AGTCTCAGGCCAACCCAGCCTATCAGGCCCCCTCCGACATAAATGGATGGGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp GAGGCAGCTCCTCCTGCCACAGCCGAGTGGACGCCACCCTGGGAACCAGGGCCAGCTGTTCATTTTGAGTaGATAGTTACTACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: EAAPPATAEWTPPWEPGPAVHFE*IVTTLR
Trigger: CCTCAGGGTAGTAACTATGCACTCAAAATGAACAGC...TGGCCCTGGTTCCCAGGGTGGCGTCCACTCGGCTGTGGCAGGAGGAGCTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp GAGGCAGCTCCTCCTGCCACAGCCGAGTGGACGCCACCCTGGGAACCAGGGCCAGTTGTGTCTCCCTCCTaGTTAATCATATCCATTCCA +
Preference number: 4 (lower is better)
Translates to: EAAPPATAEWTPPWEPGPVVSPS*LIISIP
Trigger: TGGAATGGATATGATTAAGCAGGAGGGAGACACAAC...TGGCCCTGGTTCCCAGGGTGGCGTCCACTCGGCTGTGGCAGGAGGAGCTGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR TCA 90 bp CGTGATATGAAGCCACTGGGTTGCTTCTCCTTGGGCACTCACCTGCTCGGGACCTGGGCCATTTGTGCCTaGGATGCATACTGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: RDMKPLGCFSLGTHLLGTWAICA*DAYCCG
Trigger: CCCACAGCAGTATGCATCTCAGGCACAAATGGCCCA...GGTCCCGAGCAGGTGAGTGCCCAAGGAGAAGCAACCCAGTGGCTTCATATCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR TCA 90 bp GCGCCCATCCATTTATGTCGGAGGGGGCCTGATAGGCTGGGTTGGCCTGAGACTAGACTGGAAGTGTTTTaGGCAAGTGAGCCCGGTCAG +
Preference number: 4 (lower is better)
Translates to: APIHLCRRGPDRLGWPETRLEVF*ASEPGQ
Trigger: CTGACCGGGCTCACTTGCTCAAAACACTTCCAGTCT...AGTCTCAGGCCAACCCAGCCTATCAGGCCCCCTCCGACATAAATGGATGGGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp GAGGCAGCTCCTCCTGCCACAGCCGAGTGGACGCCACCCTGGGAACCAGGGCCATGTGCCTGTAAACAGTaGAGAAGATCTATAAGTGTG +
Preference number: 4 (lower is better)
Translates to: EAAPPATAEWTPPWEPGPCACKQ*RRSISV
Trigger: CACACTTATAGATCTTCTGCACTGTTTACAGGCACA...TGGCCCTGGTTCCCAGGGTGGCGTCCACTCGGCTGTGGCAGGAGGAGCTGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp GCGCCCATCCATTTATGTCGGAGGGGGCCTGATAGGCTGGGTTGGCCTGAGACTGGTCAGGACATTCCTTaGGCTTTCTTGTCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: APIHLCRRGPDRLGWPETGQDIP*AFLSLP
Trigger: GGGCAGAGACAAGAAAGCGCAAGGAATGTCCTGACC...AGTCTCAGGCCAACCCAGCCTATCAGGCCCCCTCCGACATAAATGGATGGGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp GCGCCCATCCATTTATGTCGGAGGGGGCCTGATAGGCTGGGTTGGCCTGAGACTGGAATGCAAGCTTCCTaGAGGGGAAAACTGACTGGG +
Preference number: 4 (lower is better)
Translates to: APIHLCRRGPDRLGWPETGMQAS*RGKLTG
Trigger: CCCAGTCAGTTTTCCCCTGCAGGAAGCTTGCATTCC...AGTCTCAGGCCAACCCAGCCTATCAGGCCCCCTCCGACATAAATGGATGGGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp GAGGCAGCTCCTCCTGCCACAGCCGAGTGGACGCCACCCTGGGAACCAGGGCCAGGTTCCTACAGCGGCTaGATATCATATAGATTAGAT +
Preference number: 4 (lower is better)
Translates to: EAAPPATAEWTPPWEPGPGSYSG*ISYRLD
Trigger: ATCTAATCTATATGATATGCAGCCGCTGTAGGAACC...TGGCCCTGGTTCCCAGGGTGGCGTCCACTCGGCTGTGGCAGGAGGAGCTGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp GCGCCCATCCATTTATGTCGGAGGGGGCCTGATAGGCTGGGTTGGCCTGAGACTTGCCCATTCTCCAGATaGCATAGTAGGCCGAGAAGC +
Preference number: 4 (lower is better)
Translates to: APIHLCRRGPDRLGWPETCPFSR*HSRPRS
Trigger: GCTTCTCGGCCTACTATGCCATCTGGAGAATGGGCA...AGTCTCAGGCCAACCCAGCCTATCAGGCCCCCTCCGACATAAATGGATGGGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp GAGGACAGCCCTGACGTAGGCACGGAGGTCACTGAGGTCATGCTGATCTGTCCTCATACCTCCTTGGACTaGCCGGTTCATGGCACTGGT +
Preference number: 4 (lower is better)
Translates to: EDSPDVGTEVTEVMLICPHTSLD*PVHGTG
Trigger: ACCAGTGCCATGAACCGGCCAGTCCAAGGAGGTATG...AGGACAGATCAGCATGACCTCAGTGACCTCCGTGCCTACGTCAGGGCTGTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp GAGGCAGCTCCTCCTGCCACAGCCGAGTGGACGCCACCCTGGGAACCAGGGCCAACTTATTCCGTAGTTTaGAGGAAATGGAAACTGCTG +
Preference number: 4 (lower is better)
Translates to: EAAPPATAEWTPPWEPGPTYSVV*RKWKLL
Trigger: CAGCAGTTTCCATTTCCTCCAAACTACGGAATAAGT...TGGCCCTGGTTCCCAGGGTGGCGTCCACTCGGCTGTGGCAGGAGGAGCTGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR TCA 90 bp GGCGATGCTGAAGTTGAAGTCTTAGTTGATTTGGCTGGTTCTGCACTAGGCCCGCCCTCGCTGAGGGCCTaGAGTGCATTGAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GDAEVEVLVDLAGSALGPPSLRA*SALREL
Trigger: CAGCTCCCTCAATGCACTTCAGGCCCTCAGCGAGGG...CGGGCCTAGTGCAGAACCAGCCAAATCAACTAAGACTTCAACTTCAGCATCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGGGTCACGCCGTCAGGTaGCGGCTGCCGTCGGCGCTG +
Preference number: 4 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWGHAVR*RLPSAL
Trigger: CAGCGCCGACGGCAGCCGGCACCTGACGGCGTGACC...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR GCA 90 bp CGTGATATGAAGCCACTGGGTTGCTTCTCCTTGGGCACTCACCTGCTCGGGACCCTGTTCTGGATCTACTaGTTGGCTCTGGCTGACCAG +
Preference number: 4 (lower is better)
Translates to: RDMKPLGCFSLGTHLLGTLFWIY*LALADQ
Trigger: CTGGTCAGCCAGAGCCAAGCAGTAGATCCAGAACAG...GGTCCCGAGCAGGTGAGTGCCCAAGGAGAAGCAACCCAGTGGCTTCATATCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp AGGCTCTATCAATCTCCTCCAGGCCATCAAAATTCCGCAAGGCCAGATACAGCTAGAGGCAGCTCCTCCTaGCACAGCCGAGTGGACGCC +
Preference number: 4 (lower is better)
Translates to: RLYQSPPGHQNSARPDTARGSSS*HSRVDA
Trigger: GGCGTCCACTCGGCTGTGGCAGGAGGAGCTGCCTCT...AGCTGTATCTGGCCTTGCGGAATTTTGATGGCCTGGAGGAGATTGATAGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp GGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTGTCATACCTTGGGCACTCACCTaGTCGGGACCCATGGAGGAC +
Preference number: 4 (lower is better)
Translates to: GLLIVAGIPLGATMLGVIPWALT*SGPMED
Trigger: GTCCTCCATGGGTCCCGAGCAGGTGAGTGCCCAAGG...TATGACACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp TCTCCTCCAGGCCATCAAAATTCCGCAAGGCCAGATACAGCTGGTCCAGGAGAGCCCAGCCTGGTTTCATaGCTGCTCTCATGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SPPGHQNSARPDTAGPGEPSLVS*LLSWCW
Trigger: CCAGCACCATGAGAGCAGCCATGAAACCAGGCTGGG...CTCTCCTGGACCAGCTGTATCTGGCCTTGCGGAATTTTGATGGCCTGGAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp GCGCCCATCCATTTATGTCGGAGGGGGCCTGATAGGCTGGGTTGGCCTGAGACTTACTACCCTGAGGAGTaGTTGCTTGCATGCCTGACA +
Preference number: 4 (lower is better)
Translates to: APIHLCRRGPDRLGWPETYYPEE*LLACLT
Trigger: TGTCAGGCATGCAAGCAACCACTCCTCAGGGTAGTA...AGTCTCAGGCCAACCCAGCCTATCAGGCCCCCTCCGACATAAATGGATGGGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CAA 72 bp AAAAGCCGTGATATGAAGCCACTGGGTTGCTTCTCCTaGGGCACTCACCTGCTCGGGACCCATGGAGGACAG +
Preference number: 4 (lower is better)
Translates to: KSRDMKPLGCFS*GTHLLGTHGGQ
Trigger: CTGTCCTCCATGGGTCCCGAGCAGGTGAGTGCCCAAGGAGAAGCAACCCAGTGGCTTCATATCACGGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR TCA 90 bp CGTGATATGAAGCCACTGGGTTGCTTCTCCTTGGGCACTCACCTGCTCGGGACCTGGTATCCAGAGACGTaGTCTTGCCTTGGAGATCCT +
Preference number: 4 (lower is better)
Translates to: RDMKPLGCFSLGTHLLGTWYPET*SCLGDP
Trigger: AGGATCTCCAAGGCAAGATCACGTCTCTGGATACCA...GGTCCCGAGCAGGTGAGTGCCCAAGGAGAAGCAACCCAGTGGCTTCATATCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR TCA 90 bp AGGCTCTATCAATCTCCTCCAGGCCATCAAAATTCCGCAAGGCCAGATACAGCTGGCTTGCTTGTCAACTaGTCCAGCAGGGGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: RLYQSPPGHQNSARPDTAGLLVN*SSRGAW
Trigger: CCAGGCGCCCCTGCTGGATCAGTTGACAAGCAAGCC...AGCTGTATCTGGCCTTGCGGAATTTTGATGGCCTGGAGGAGATTGATAGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR TCA 90 bp GAGGACAGCCCTGACGTAGGCACGGAGGTCACTGAGGTCATGCTGATCTGTCCTCCTTCTGCTCCAGCATaGTGTTGGAATCCTGACTTG +
Preference number: 4 (lower is better)
Translates to: EDSPDVGTEVTEVMLICPPSAPA*CWNPDL
Trigger: CAAGTCAGGATTCCAACATCATGCTGGAGCAGAAGG...AGGACAGATCAGCATGACCTCAGTGACCTCCGTGCCTACGTCAGGGCTGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR TCA 90 bp CGTGATATGAAGCCACTGGGTTGCTTCTCCTTGGGCACTCACCTGCTCGGGACCCGCTGTCCCATGGTGTaGAAGTTTGGATCTTGCATG +
Preference number: 4 (lower is better)
Translates to: RDMKPLGCFSLGTHLLGTRCPMV*KFGSCM
Trigger: CATGCAAGATCCAAACTTTCACACCATGGGACAGCG...GGTCCCGAGCAGGTGAGTGCCCAAGGAGAAGCAACCCAGTGGCTTCATATCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR TCA 90 bp ATCCGAGGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTGTGAGCCCGGTCAGCTaGAGAAGCAACTGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: IRGLLIVAGIPLGATMLGVSPVS*RSNWLQ
Trigger: CTGAAGCCAGTTGCTTCTTCAGCTGACCGGGCTCAC...ACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCCTCGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp TCTCCTCCAGGCCATCAAAATTCCGCAAGGCCAGATACAGCTGGTCCAGGAGAGCCACTCCAGGGCTCATaGGATGCCTTGGTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: SPPGHQNSARPDTAGPGEPLQGS*DALVKA
Trigger: TGCTTTCACCAAGGCATCGCATGAGCCCTGGAGTGG...CTCTCCTGGACCAGCTGTATCTGGCCTTGCGGAATTTTGATGGCCTGGAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp TCTCCTCCAGGCCATCAAAATTCCGCAAGGCCAGATACAGCTGGTCCAGGAGAGAGCCGAACTCTGCGGTaGCCATTCTCCAGATGGCAT +
Preference number: 4 (lower is better)
Translates to: SPPGHQNSARPDTAGPGESRTLR*PFSRWH
Trigger: ATGCCATCTGGAGAATGGGCACCGCAGAGTTCGGCT...CTCTCCTGGACCAGCTGTATCTGGCCTTGCGGAATTTTGATGGCCTGGAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp CGTGATATGAAGCCACTGGGTTGCTTCTCCTTGGGCACTCACCTGCTCGGGACCTGCATGCCTGACACATaGTTCATTCCCCCAGAACCA +
Preference number: 4 (lower is better)
Translates to: RDMKPLGCFSLGTHLLGTCMPDT*FIPPEP
Trigger: TGGTTCTGGGGGAATGAACCATGTGTCAGGCATGCA...GGTCCCGAGCAGGTGAGTGCCCAAGGAGAAGCAACCCAGTGGCTTCATATCACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp GTTTGGAGGAAATGGAAACTGCTGTGCATTTGCCTGGGGAATCCGAGGGTTGCTGGAGGTGGGCTGTCCTaGATTCATGCCAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VWRKWKLLCICLGNPRVAGGGLS*IHARAA
Trigger: AGCAGCCCTGGCATGAATCCAGGACAGCCCACCTCC...AGCAACCCTCGGATTCCCCAGGCAAATGCACAGCAGTTTCCATTTCCTCCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp ATCCGAGGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTCAGGGGAAAACTGACTaGGTGGGATTCGAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: IRGLLIVAGIPLGATMLGQGKTD*VGFEGC
Trigger: GCAGCCCTCGAATCCCACCCAGTCAGTTTTCCCCTG...ACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCCTCGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp CGTGATATGAAGCCACTGGGTTGCTTCTCCTTGGGCACTCACCTGCTCGGGACCTGGGGCAGTCTGATTTaGAGGAGCTTGTTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: RDMKPLGCFSLGTHLLGTWGSLI*RSLLLA
Trigger: AGCCAACAACAAGCTCCTCCAAATCAGACTGCCCCA...GGTCCCGAGCAGGTGAGTGCCCAAGGAGAAGCAACCCAGTGGCTTCATATCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp TGCATTTGCCTGGGGAATCCGAGGGTTGCTCATAGTTGCTGGCATACCACTAGGTGGGTTGCTTCTCCTTaGGCACTCACCTGCTCGGGA +
Preference number: 4 (lower is better)
Translates to: CICLGNPRVAHSCWHTTRWVASP*ALTCSG
Trigger: TCCCGAGCAGGTGAGTGCCCAAGGAGAAGCAACCCA...CCTAGTGGTATGCCAGCAACTATGAGCAACCCTCGGATTCCCCAGGCAAATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CAA 72 bp GGAAACTGCTGTGCATTTGCCTGGGGAATCCGAGGGTaGCTCATAGTTGCTGGCATACCACTAGGAGCCACC +
Preference number: 4 (lower is better)
Translates to: GNCCAFAWGIRG*LIVAGIPLGAT
Trigger: GGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCCTCGGATTCCCCAGGCAAATGCACAGCAGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR TCA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGGGCTGCCGTCGGCGCTaGCCTTCGCCGCCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: VVISAINLNTLAFSPILEGCRRR*PSPPKL
Trigger: CAGCTTCGGCGGCGAAGGTCAGCGCCGACGGCAGCC...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR TCA 90 bp GAGGACAGCCCTGACGTAGGCACGGAGGTCACTGAGGTCATGCTGATCTGTCCTTGCGCATGGAACTTCTaGATACACCTTCTTACCAGG +
Preference number: 4 (lower is better)
Translates to: EDSPDVGTEVTEVMLICPCAWNF*IHLLTR
Trigger: CCTGGTAAGAAGGTGTATTCAGAAGTTCCATGCGCA...AGGACAGATCAGCATGACCTCAGTGACCTCCGTGCCTACGTCAGGGCTGTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR TCA 90 bp GCGCCCATCCATTTATGTCGGAGGGGGCCTGATAGGCTGGGTTGGCCTGAGACTGGTTCATTAGTAGTCTaGGAACGGATGAGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: APIHLCRRGPDRLGWPETGSLVV*ERMSLL
Trigger: GAGCAAACTCATCCGTTCTCAGACTACTAATGAACC...AGTCTCAGGCCAACCCAGCCTATCAGGCCCCCTCCGACATAAATGGATGGGCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTAGCTGTAGCCGAGGCTaGGGCCGCCATGTTCCCGTG +
Preference number: 4 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVSCSRG*GRHVPV
Trigger: CACGGGAACATGGCGGCCGCAGCCTCGGCTACAGCT...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR GCA 90 bp TCTCCTCCAGGCCATCAAAATTCCGCAAGGCCAGATACAGCTGGTCCAGGAGAGCAGAACCACCAAACCTaGCCATGGGCATGCCCATTT +
Preference number: 4 (lower is better)
Translates to: SPPGHQNSARPDTAGPGEQNHQT*PWACPF
Trigger: AAATGGGCATGCCCATGGGCAGGTTTGGTGGTTCTG...CTCTCCTGGACCAGCTGTATCTGGCCTTGCGGAATTTTGATGGCCTGGAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp TGCATTTGCCTGGGGAATCCGAGGGTTGCTCATAGTTGCTGGCATACCACTAGGTGCTGTCATGCAGTCTaGTCTGCCCGTCAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: CICLGNPRVAHSCWHTTRCCHAV*SARQLS
Trigger: AGAGAGCTGACGGGCAGAGCAGACTGCATGACAGCA...CCTAGTGGTATGCCAGCAACTATGAGCAACCCTCGGATTCCCCAGGCAAATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp GCGCCCATCCATTTATGTCGGAGGGGGCCTGATAGGCTGGGTTGGCCTGAGACTCATTTGTGCCTGAGATaGATACTGCTGTGGGAAAAC +
Preference number: 4 (lower is better)
Translates to: APIHLCRRGPDRLGWPETHLCLR*ILLWEN
Trigger: GTTTTCCCACAGCAGTATGCATCTCAGGCACAAATG...AGTCTCAGGCCAACCCAGCCTATCAGGCCCCCTCCGACATAAATGGATGGGCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp ATCCGAGGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTCGGCCGGGGGCAGGTTaGGGTCATTTGTTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: IRGLLIVAGIPLGATMLGRPGAG*GHLFPF
Trigger: AAAAGGAAACAAATGACCCCAACCTGCCCCCGGCCG...ACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCCTCGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp GAGGACAGCCCTGACGTAGGCACGGAGGTCACTGAGGTCATGCTGATCTGTCCTGGCTGGCAGGTCAGTTaGGTTGAAACAAATAGACAC +
Preference number: 4 (lower is better)
Translates to: EDSPDVGTEVTEVMLICPGWQVS*VETNRH
Trigger: GTGTCTATTTGTTTCAACCCAACTGACCTGCCAGCC...AGGACAGATCAGCATGACCTCAGTGACCTCCGTGCCTACGTCAGGGCTGTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR TCA 90 bp TCTCCTCCAGGCCATCAAAATTCCGCAAGGCCAGATACAGCTGGTCCAGGAGAGTTGATGGACTTTGGTTaGGAGACAGCGAAGCACTGC +
Preference number: 4 (lower is better)
Translates to: SPPGHQNSARPDTAGPGELMDFG*ETAKHC
Trigger: GCAGTGCTTCGCTGTCTCTCAACCAAAGTCCATCAA...CTCTCCTGGACCAGCTGTATCTGGCCTTGCGGAATTTTGATGGCCTGGAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR TCA 90 bp GTTTGGAGGAAATGGAAACTGCTGTGCATTTGCCTGGGGAATCCGAGGGTTGCTGGTTGCTTGCATGCCTaGCACATGGTTCATTCCCCC +
Preference number: 4 (lower is better)
Translates to: VWRKWKLLCICLGNPRVAGCLHA*HMVHSP
Trigger: GGGGGAATGAACCATGTGTCAGGCATGCAAGCAACC...AGCAACCCTCGGATTCCCCAGGCAAATGCACAGCAGTTTCCATTTCCTCCAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR TCA 90 bp AGGCTCTATCAATCTCCTCCAGGCCATCAAAATTCCGCAAGGCCAGATACAGCTGGCGAGGGCTCCATCTaGTCAGATTTGGTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: RLYQSPPGHQNSARPDTAGEGSI*SDLVVS
Trigger: GCTGACCACCAAATCTGATCAGATGGAGCCCTCGCC...AGCTGTATCTGGCCTTGCGGAATTTTGATGGCCTGGAGGAGATTGATAGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR TCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATGGCTTGCTTGTCAACTaGTCCAGCAGGGGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHGLLVN*SSRGAW
Trigger: CCAGGCGCCCCTGCTGGATCAGTTGACAAGCAAGCC...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR TCA 90 bp GGACACATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCCATGGAGGACAGCCCTaGCGTAGGCACGGAGGTCAC +
Preference number: 4 (lower is better)
Translates to: GHIDVHVVTVHAGVCLLPHGGQP*RRHGGH
Trigger: GTGACCTCCGTGCCTACGTCAGGGCTGTCCTCCATG...GGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAATGTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR TCA 90 bp GGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTGTCATAAAATCAAGGAGCGGGTaGCTCGGGGATGGACAAGAG +
Preference number: 4 (lower is better)
Translates to: GLLIVAGIPLGATMLGVIKSRSG*LGDGQE
Trigger: CTCTTGTCCATCCCCGAGTCACCCGCTCCTTGATTT...TATGACACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR TCA 90 bp ATCCGAGGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTAGAGAAATCGGACGCTaGGGTCCAGGACATGATCAC +
Preference number: 4 (lower is better)
Translates to: IRGLLIVAGIPLGATMLGREIGR*GPGHDH
Trigger: GTGATCATGTCCTGGACCTCAGCGTCCGATTTCTCT...ACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCCTCGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTGTGGGATTCGAGGGCTaGCAGCCACTCCAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVVGFEG*QPLQGS
Trigger: TGAGCCCTGGAGTGGCTGGCAGCCCTCGAATCCCAC...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGCGTCAGCTCTCTCACTaGTCACGGCCGGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWRQLSH*SRPGAG
Trigger: ACCTGCCCCCGGCCGTGAGCAGTGAGAGAGCTGACG...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp GTTTGGAGGAAATGGAAACTGCTGTGCATTTGCCTGGGGAATCCGAGGGTTGCTTGCCCTTTGCTGTCATaGAGTCTGCTCTGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: VWRKWKLLCICLGNPRVACPLLS*SLLCPS
Trigger: TGACGGGCAGAGCAGACTGCATGACAGCAAAGGGCA...AGCAACCCTCGGATTCCCCAGGCAAATGCACAGCAGTTTCCATTTCCTCCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp GTTTGGAGGAAATGGAAACTGCTGTGCATTTGCCTGGGGAATCCGAGGGTTGCTCTGGCGATTCTGCTGTaGTTGGAGGCGATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: VWRKWKLLCICLGNPRVALAILL*LEAMLK
Trigger: CTTCAGCATCGCCTCCAAGCACAGCAGAATCGCCAG...AGCAACCCTCGGATTCCCCAGGCAAATGCACAGCAGTTTCCATTTCCTCCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTAGGGCCAGGCCTGTCTaGTCTAGCAGAACCGGCTGG +
Preference number: 4 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVRARPV*SSRTGW
Trigger: CCAGCCGGTTCTGCTAGAGCAGACAGGCCTGGCCCT...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp GTTTGGAGGAAATGGAAACTGCTGTGCATTTGCCTGGGGAATCCGAGGGTTGCTCAGGTCCTCCCAGCCTaGTTTCATGGCTGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: VWRKWKLLCICLGNPRVAQVLPA*FHGCSH
Trigger: ATGAGAGCAGCCATGAAACCAGGCTGGGAGGACCTG...AGCAACCCTCGGATTCCCCAGGCAAATGCACAGCAGTTTCCATTTCCTCCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp TCATCACTCGGAGACTCAGCTGCAGGATGTGGACATAGCAAGTCATCTGGAGAAAGCTCACTGCCAGGCTaGTCACCAGGCTCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: SSLGDSAAGCGHSKSSGESSLPG*SPGSKL
Trigger: GAGCTTTGAGCCTGGTGACCAGCCTGGCAGTGAGCT...TTCTCCAGATGACTTGCTATGTCCACATCCTGCAGCTGAGTCTCCGAGTGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATTCCAGCAGGGGCGCCTaGCCTCGTGTCTGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHSSRGA*PRVWEK
Trigger: CTTTTCCCAGACACGAGGCCAGGCGCCCCTGCTGGA...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTGGCTGCTGGGCCTCATaGGGATGCTGGCTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: KVEPFEGIYELVATEKCCGCWAS*GCWLLG
Trigger: ACCCAGCAGCCAGCATCCCCATGAGGCCCAGCAGCC...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp GGCGATGCTGAAGTTGAAGTCTTAGTTGATTTGGCTGGTTCTGCACTAGGCCCGAAGGCCAGATACAGCTaGTCCAGGAGAGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: GDAEVEVLVDLAGSALGPKARYS*SRRAPS
Trigger: TGAGGGAGCTCTCCTGGACCAGCTGTATCTGGCCTT...CGGGCCTAGTGCAGAACCAGCCAAATCAACTAAGACTTCAACTTCAGCATCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp GGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTGTCATATGCTGTGCATTTGCCTaGGGAATCCGAGGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: GLLIVAGIPLGATMLGVICCAFA*GIRGLL
Trigger: GAGCAACCCTCGGATTCCCCAGGCAAATGCACAGCA...TATGACACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp GTTTGGAGGAAATGGAAACTGCTGTGCATTTGCCTGGGGAATCCGAGGGTTGCTGACATAAGTGGGCTCTaGGGAGTCGTAGCCCCAGTA +
Preference number: 4 (lower is better)
Translates to: VWRKWKLLCICLGNPRVADISGL*GVVAPV
Trigger: TACTGGGGCTACGACTCCCCAGAGCCCACTTATGTC...AGCAACCCTCGGATTCCCCAGGCAAATGCACAGCAGTTTCCATTTCCTCCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp TGCATTTGCCTGGGGAATCCGAGGGTTGCTCATAGTTGCTGGCATACCACTAGGTTGCTGCCCAAAGTGTaGTGGGGACTGCTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: CICLGNPRVAHSCWHTTRLLPKV*WGLLGK
Trigger: TTTTCCCAGCAGTCCCCACCACACTTTGGGCAGCAA...CCTAGTGGTATGCCAGCAACTATGAGCAACCCTCGGATTCCCCAGGCAAATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp TCATCACTCGGAGACTCAGCTGCAGGATGTGGACATAGCAAGTCATCTGGAGAACGGGTGACTCGGGGATaGACAAGAGTAGCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: SSLGDSAAGCGHSKSSGERVTRG*TRVAGS
Trigger: AGAGCCAGCTACTCTTGTCCATCCCCGAGTCACCCG...TTCTCCAGATGACTTGCTATGTCCACATCCTGCAGCTGAGTCTCCGAGTGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CAA 72 bp TGGATCTTGCATGGGAGAATAGCTACCCTGGGCCATTaGTGCCTGAGATGCATACTGCTGTGGGAAAACGGG +
Preference number: 4 (lower is better)
Translates to: WILHGRIATLGH*CLRCILLWENG
Trigger: CCCGTTTTCCCACAGCAGTATGCATCTCAGGCACAAATGGCCCAGGGTAGCTATTCTCCCATGCAAGATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR TCA 90 bp GAGGACAGCCCTGACGTAGGCACGGAGGTCACTGAGGTCATGCTGATCTGTCCTCTTCTCCTTCTTCTTTaGTGGACTTTGGTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: EDSPDVGTEVTEVMLICPLLLLL*WTLVER
Trigger: TCTCTCAACCAAAGTCCATCAAAGAAGAAGGAGAAG...AGGACAGATCAGCATGACCTCAGTGACCTCCGTGCCTACGTCAGGGCTGTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR TCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATCCTGCAGGGGAAAACTaGCTGGGTGGGATTCGAGGG +
Preference number: 4 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHPAGEN*LGGIRG
Trigger: CCCTCGAATCCCACCCAGTCAGTTTTCCCCTGCAGG...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR TCA 90 bp TCATCACTCGGAGACTCAGCTGCAGGATGTGGACATAGCAAGTCATCTGGAGAAGGCCATGGGGCAGTCTaGTTTGGAGGAGCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: SSLGDSAAGCGHSKSSGEGHGAV*FGGACC
Trigger: ACAACAAGCTCCTCCAAATCAGACTGCCCCATGGCC...TTCTCCAGATGACTTGCTATGTCCACATCCTGCAGCTGAGTCTCCGAGTGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR TCA 90 bp AGGCTCTATCAATCTCCTCCAGGCCATCAAAATTCCGCAAGGCCAGATACAGCTCTGCTTGGCTCTGGCTaGCCAGTTCGGGTATTCCTA +
Preference number: 4 (lower is better)
Translates to: RLYQSPPGHQNSARPDTALLGSG*PVRVFL
Trigger: TAGGAATACCCGAACTGGTCAGCCAGAGCCAAGCAG...AGCTGTATCTGGCCTTGCGGAATTTTGATGGCCTGGAGGAGATTGATAGAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp GGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTGTCATAGATTCATGCCAGGGCTaGTTTGTGAGGGGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: GLLIVAGIPLGATMLGVIDSCQG*FVRGCS
Trigger: TGAACAGCCCCTCACAAAGCAGCCCTGGCATGAATC...TATGACACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGGTGGGATTCGAGGGCTaGCAGCCACTCCAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWVGFEG*QPLQGS
Trigger: TGAGCCCTGGAGTGGCTGGCAGCCCTCGAATCCCAC...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp TCATCACTCGGAGACTCAGCTGCAGGATGTGGACATAGCAAGTCATCTGGAGAAGGCTATTTCCTGTGCTaGTGCAAACTCCCACAGGGG +
Preference number: 4 (lower is better)
Translates to: SSLGDSAAGCGHSKSSGEGYFLC*CKLPQG
Trigger: CCCCTGTGGGAGTTTGCAGCAGCACAGGAAATAGCC...TTCTCCAGATGACTTGCTATGTCCACATCCTGCAGCTGAGTCTCCGAGTGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp TGCATTTGCCTGGGGAATCCGAGGGTTGCTCATAGTTGCTGGCATACCACTAGGGTTTGGTCTGCCCTTTaGTGTCATGCAGTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: CICLGNPRVAHSCWHTTRVWSAL*CHAVCS
Trigger: AGAGCAGACTGCATGACAGCAAAGGGCAGACCAAAC...CCTAGTGGTATGCCAGCAACTATGAGCAACCCTCGGATTCCCCAGGCAAATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp GGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTGTCATAACCCTGGGCCATTTGTaGCTGAGATGCATACTGCTG +
Preference number: 4 (lower is better)
Translates to: GLLIVAGIPLGATMLGVITLGHL*LRCILL
Trigger: CAGCAGTATGCATCTCAGGCACAAATGGCCCAGGGT...TATGACACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp ATCCGAGGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTCTGGGCCAGCATCTGTaGATTAATAGGTGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: IRGLLIVAGIPLGATMLGLGQHL*INRCLC
Trigger: ACACAGGCACCTATTAATGCACAGATGCTGGCCCAG...ACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCCTCGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp GGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTGTCATAATGCTGGTGTTTGCTTaGTGCCCAAAGTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: GLLIVAGIPLGATMLGVIMLVFA*CPKCGG
Trigger: CCCACCACACTTTGGGCAGCAAGCAAACACCAGCAT...TATGACACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp TCATCACTCGGAGACTCAGCTGCAGGATGTGGACATAGCAAGTCATCTGGAGAAGGTTCATGCTGCTCATaGCACCTGTGTTGGTCGCCA +
Preference number: 4 (lower is better)
Translates to: SSLGDSAAGCGHSKSSGEGSCCS*HLCWSP
Trigger: TGGCGACCAACACAGGTGGCATGAGCAGCATGAACC...TTCTCCAGATGACTTGCTATGTCCACATCCTGCAGCTGAGTCTCCGAGTGATGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp TGCATTTGCCTGGGGAATCCGAGGGTTGCTCATAGTTGCTGGCATACCACTAGGGCCTCGGTGAGTTACTaGCACATCCTAAAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: CICLGNPRVAHSCWHTTRASVSY*HILKWL
Trigger: AAGCCACTTTAGGATGTGGCAGTAACTCACCGAGGC...CCTAGTGGTATGCCAGCAACTATGAGCAACCCTCGGATTCCCCAGGCAAATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp GTTTGGAGGAAATGGAAACTGCTGTGCATTTGCCTGGGGAATCCGAGGGTTGCTTCATGGCTGCTCTCATaGTGCTGGTATCCAGAGACG +
Preference number: 4 (lower is better)
Translates to: VWRKWKLLCICLGNPRVASWLLS*CWYPET
Trigger: CGTCTCTGGATACCAGCACCATGAGAGCAGCCATGA...AGCAACCCTCGGATTCCCCAGGCAAATGCACAGCAGTTTCCATTTCCTCCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATGGAGGTGGGCTGTCCTaGATTCATGCCAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHGGGLS*IHARAA
Trigger: AGCAGCCCTGGCATGAATCCAGGACAGCCCACCTCC...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp CTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTGTCATATTCAACCAGGAGCTGTGCTGCTaGACTCCTGGCTCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: LIVAGIPLGATMLGVIFNQELCC*TPGSGL
Trigger: AAGACCTGAGCCAGGAGTCCAGCAGCACAGCTCCTG...GTTGAATATGACACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp GAGGACAGCCCTGACGTAGGCACGGAGGTCACTGAGGTCATGCTGATCTGTCCTCCAGTCTCTCAAGTTTaGGGGTTATTTCTGGTAAAC +
Preference number: 4 (lower is better)
Translates to: EDSPDVGTEVTEVMLICPPVSQV*GLFLVN
Trigger: GTTTACCAGAAATAACCCCCAAACTTGAGAGACTGG...AGGACAGATCAGCATGACCTCAGTGACCTCCGTGCCTACGTCAGGGCTGTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp GTTTGGAGGAAATGGAAACTGCTGTGCATTTGCCTGGGGAATCCGAGGGTTGCTAGATGCATACTGCTGTaGGAAAACGGGCGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: VWRKWKLLCICLGNPRVARCILL*ENGRLL
Trigger: CAGAAGGCGCCCGTTTTCCCACAGCAGTATGCATCT...AGCAACCCTCGGATTCCCCAGGCAAATGCACAGCAGTTTCCATTTCCTCCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATGGGGGCCTGATAGGCTaGGTTGGCCTGAGACTGTTG +
Preference number: 4 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHGGLIG*VGLRLL
Trigger: CAACAGTCTCAGGCCAACCCAGCCTATCAGGCCCCC...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp GGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTGTCATATCTAGCAGAACCGGCTaGCAGGTCAGTTGGGTTGAA +
Preference number: 4 (lower is better)
Translates to: GLLIVAGIPLGATMLGVISSRTG*QVSWVE
Trigger: TTCAACCCAACTGACCTGCCAGCCGGTTCTGCTAGA...TATGACACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR TCA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCATGCGATGCCTTGGTaGAAGCATGGAGGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVHAMPW*KHGGGL
Trigger: CAGCCCACCTCCATGCTTTCACCAAGGCATCGCATG...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR TCA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACACCTGCAGGGGAAAACTaGCTGGGTGGGATTCGAGGG +
Preference number: 4 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTPAGEN*LGGIRG
Trigger: CCCTCGAATCCCACCCAGTCAGTTTTCCCCTGCAGG...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR TCA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTGAATTGTATGCCACATaGGCCTCAGCCCACGGGGAG +
Preference number: 4 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVELYAT*ASAHGE
Trigger: CTCCCCGTGGGCTGAGGCTCATGTGGCATACAATTC...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR TCA 90 bp TCTCCTCCAGGCCATCAAAATTCCGCAAGGCCAGATACAGCTGGTCCAGGAGAGCCTTACCTATATTCATaGCCTGAGACTGAAGCGTCT +
Preference number: 4 (lower is better)
Translates to: SPPGHQNSARPDTAGPGEPYLYS*PETEAS
Trigger: AGACGCTTCAGTCTCAGGTCATGAATATAGGTAAGG...CTCTCCTGGACCAGCTGTATCTGGCCTTGCGGAATTTTGATGGCCTGGAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTGCGCTTTCTTGTCTCTaGCCTGGAGGGGTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVALSCL*PGGVRG
Trigger: ACCTCTGACCCCTCCAGGGCAGAGACAAGAAAGCGC...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp CGTGATATGAAGCCACTGGGTTGCTTCTCCTTGGGCACTCACCTGCTCGGGACCCAAATCAAGCAGGACTaGAAATCTTCTCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RDMKPLGCFSLGTHLLGTQIKQD*KSSPSS
Trigger: AGAAGAAGGAGAAGATTTGCAGTCCTGCTTGATTTG...GGTCCCGAGCAGGTGAGTGCCCAAGGAGAAGCAACCCAGTGGCTTCATATCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp GGCGATGCTGAAGTTGAAGTCTTAGTTGATTTGGCTGGTTCTGCACTAGGCCCGATGGCAGCTGCTCTCTaGTTGTCCAGTTGTACCTTC +
Preference number: 4 (lower is better)
Translates to: GDAEVEVLVDLAGSALGPMAAAL*LSSCTF
Trigger: GAAGGTACAACTGGACAAGCAGAGAGCAGCTGCCAT...CGGGCCTAGTGCAGAACCAGCCAAATCAACTAAGACTTCAACTTCAGCATCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp GGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTGTCATAGTACATGCTGGTGTTTaGTTGCTGCCCAAAGTGTGG +
Preference number: 4 (lower is better)
Translates to: GLLIVAGIPLGATMLGVIVHAGV*LLPKVW
Trigger: CCACACTTTGGGCAGCAAGCAAACACCAGCATGTAC...TATGACACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp AGGCTCTATCAATCTCCTCCAGGCCATCAAAATTCCGCAAGGCCAGATACAGCTGAGCGACTGTCTGGATaGGAGCTTCAGACTGTCAAG +
Preference number: 4 (lower is better)
Translates to: RLYQSPPGHQNSARPDTAERLSG*ELQTVK
Trigger: CTTGACAGTCTGAAGCTCGCATCCAGACAGTCGCTC...AGCTGTATCTGGCCTTGCGGAATTTTGATGGCCTGGAGGAGATTGATAGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp TCATCACTCGGAGACTCAGCTGCAGGATGTGGACATAGCAAGTCATCTGGAGAAGTGAAAGCATGGAGGTaGGCTGTCCTGGATTCATGC +
Preference number: 4 (lower is better)
Translates to: SSLGDSAAGCGHSKSSGEVKAWR*AVLDSC
Trigger: GCATGAATCCAGGACAGCCCACCTCCATGCTTTCAC...TTCTCCAGATGACTTGCTATGTCCACATCCTGCAGCTGAGTCTCCGAGTGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp ATCCGAGGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTTCAGGTCTTTGCCTGTaGCTTCTGCTGTTAACTTGG +
Preference number: 4 (lower is better)
Translates to: IRGLLIVAGIPLGATMLGSGLCL*LLLLTW
Trigger: CCAAGTTAACAGCAGAAGCCACAGGCAAAGACCTGA...ACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCCTCGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATGCCTCATGGGGATGCTaGCTGCTGGGTTCCGAATCA +
Preference number: 4 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHASWGC*LLGSES
Trigger: TGATTCGGAACCCAGCAGCCAGCATCCCCATGAGGC...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGGGCTGCTGGGCCTCATaGGGATGCTGGCTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: VVISAINLNTLAFSPILEGCWAS*GCWLLG
Trigger: ACCCAGCAGCCAGCATCCCCATGAGGCCCAGCAGCC...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp TCATCACTCGGAGACTCAGCTGCAGGATGTGGACATAGCAAGTCATCTGGAGAAGATGCTTTCAGGCCATaGGGCAGTCTGATTTGGAGG +
Preference number: 4 (lower is better)
Translates to: SSLGDSAAGCGHSKSSGEDAFRP*GSLIWR
Trigger: CCTCCAAATCAGACTGCCCCATGGCCTGAAAGCATC...TTCTCCAGATGACTTGCTATGTCCACATCCTGCAGCTGAGTCTCCGAGTGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp TCATCACTCGGAGACTCAGCTGCAGGATGTGGACATAGCAAGTCATCTGGAGAAGCTGCCTGTTTTGGCTaGCAAAAGACGCCTGGTCTA +
Preference number: 4 (lower is better)
Translates to: SSLGDSAAGCGHSKSSGEAACFG*QKTPGL
Trigger: TAGACCAGGCGTCTTTTGCCAGCCAAAACAGGCAGC...TTCTCCAGATGACTTGCTATGTCCACATCCTGCAGCTGAGTCTCCGAGTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp GGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTGTCATATCTACTGCTTGGCTCTaGCTGACCAGTTCGGGTATT +
Preference number: 4 (lower is better)
Translates to: GLLIVAGIPLGATMLGVISTAWL*LTSSGI
Trigger: AATACCCGAACTGGTCAGCCAGAGCCAAGCAGTAGA...TATGACACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp CGTGATATGAAGCCACTGGGTTGCTTCTCCTTGGGCACTCACCTGCTCGGGACCCATGGTGTGAAAGTTTaGATCTTGCATGGGAGAATA +
Preference number: 4 (lower is better)
Translates to: RDMKPLGCFSLGTHLLGTHGVKV*ILHGRI
Trigger: TATTCTCCCATGCAAGATCCAAACTTTCACACCATG...GGTCCCGAGCAGGTGAGTGCCCAAGGAGAAGCAACCCAGTGGCTTCATATCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp ATCCGAGGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTAGGAGCCACCATGCTTaGTGTCATATTCAACCCTTG +
Preference number: 4 (lower is better)
Translates to: IRGLLIVAGIPLGATMLGRSHHA*CHIQPL
Trigger: CAAGGGTTGAATATGACACCAAGCATGGTGGCTCCT...ACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCCTCGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp AGGCTCTATCAATCTCCTCCAGGCCATCAAAATTCCGCAAGGCCAGATACAGCTCCTGATAGGCTGGGTTaGCCTGAGACTGTTGCATCA +
Preference number: 4 (lower is better)
Translates to: RLYQSPPGHQNSARPDTAPDRLG*PETVAS
Trigger: TGATGCAACAGTCTCAGGCCAACCCAGCCTATCAGG...AGCTGTATCTGGCCTTGCGGAATTTTGATGGCCTGGAGGAGATTGATAGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACAGGGGGCCTGATAGGCTaGGTTGGCCTGAGACTGTTG +
Preference number: 4 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTGGLIG*VGLRLL
Trigger: CAACAGTCTCAGGCCAACCCAGCCTATCAGGCCCCC...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp TCATCACTCGGAGACTCAGCTGCAGGATGTGGACATAGCAAGTCATCTGGAGAATGTGGTGGGGACTGCTaGGAAAACATGCTGTTTCCG +
Preference number: 4 (lower is better)
Translates to: SSLGDSAAGCGHSKSSGECGGDC*ENMLFP
Trigger: CGGAAACAGCATGTTTTCCCAGCAGTCCCCACCACA...TTCTCCAGATGACTTGCTATGTCCACATCCTGCAGCTGAGTCTCCGAGTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp TGCATTTGCCTGGGGAATCCGAGGGTTGCTCATAGTTGCTGGCATACCACTAGGATCTGTCCTGTCATCTaGTTCATGCTGCTCATGCCA +
Preference number: 4 (lower is better)
Translates to: CICLGNPRVAHSCWHTTRICPVI*FMLLMP
Trigger: TGGCATGAGCAGCATGAACCAGATGACAGGACAGAT...CCTAGTGGTATGCCAGCAACTATGAGCAACCCTCGGATTCCCCAGGCAAATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGCCCACGGGGAGGTCCTaGAGTTCTGGGCCAACATCT +
Preference number: 4 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWPTGRS*SSGPTS
Trigger: AGATGTTGGCCCAGAACTCCAGGACCTCCCCGTGGG...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR TCA 90 bp GGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTGTCATACTGTGTCACATTCTCTaGCACAAACACAACGTTGCC +
Preference number: 4 (lower is better)
Translates to: GLLIVAGIPLGATMLGVILCHIL*HKHNVA
Trigger: GGCAACGTTGTGTTTGTGTCAGAGAATGTGACACAG...TATGACACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR TCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATGGTTGCTTGCATGCCTaGCACATGGTTCATTCCCCC +
Preference number: 4 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHGCLHA*HMVHSP
Trigger: GGGGGAATGAACCATGTGTCAGGCATGCAAGCAACC...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR TCA 90 bp AGGCTCTATCAATCTCCTCCAGGCCATCAAAATTCCGCAAGGCCAGATACAGCTAGCTTCCCATCTTGCTaGGTGGGGGAGGATTCATAT +
Preference number: 4 (lower is better)
Translates to: RLYQSPPGHQNSARPDTASFPSC*VGEDSY
Trigger: ATATGAATCCTCCCCCACTCAGCAAGATGGGAAGCT...AGCTGTATCTGGCCTTGCGGAATTTTGATGGCCTGGAGGAGATTGATAGAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR TCA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACAGGCGAGGGCTCCATCTaGTCAGATTTGGTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTGEGSI*SDLVVS
Trigger: GCTGACCACCAAATCTGATCAGATGGAGCCCTCGCC...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR TCA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTGGGCTCCAACAGGTGTaGCAGGGCTGTTTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: KVEPFEGIYELVATEKCCGLQQV*QGCFQL
Trigger: CAGCTGAAAACAGCCCTGTCACACCTGTTGGAGCCC...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR GCA 90 bp ATCCGAGGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTGTGCAGCAACAAGAGTaGCATCAGACAAGGAAAAAC +
Preference number: 4 (lower is better)
Translates to: IRGLLIVAGIPLGATMLGVQQQE*HQTRKN
Trigger: GTTTTTCCTTGTCTGATGGCACTCTTGTTGCTGCAC...ACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCCTCGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp GGACACATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCCCAGGGCTCATGCGATaGCTTGGTGAAAGCATGGAG +
Preference number: 4 (lower is better)
Translates to: GHIDVHVVTVHAGVCLLPPGLMR*LGESME
Trigger: CTCCATGCTTTCACCAAGGCATCGCATGAGCCCTGG...GGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAATGTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCCACTCCAGGGCTCATaGGATGCCTTGGTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVPLQGS*DALVKA
Trigger: TGCTTTCACCAAGGCATCGCATGAGCCCTGGAGTGG...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp GGCGATGCTGAAGTTGAAGTCTTAGTTGATTTGGCTGGTTCTGCACTAGGCCCGTATGGCTATTTCCTGTaGTGCTGCAAACTCCCACAG +
Preference number: 4 (lower is better)
Translates to: GDAEVEVLVDLAGSALGPYGYFL*CCKLPQ
Trigger: CTGTGGGAGTTTGCAGCAGCACAGGAAATAGCCATA...CGGGCCTAGTGCAGAACCAGCCAAATCAACTAAGACTTCAACTTCAGCATCGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATGCTGAGGGCCTGAAGTaGATTGAGGGAGCTGTTGGT +
Preference number: 4 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHAEGLK*IEGAVG
Trigger: ACCAACAGCTCCCTCAATGCACTTCAGGCCCTCAGC...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTGCTGAGGGCCTGAAGTaGATTGAGGGAGCTGTTGGT +
Preference number: 4 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVAEGLK*IEGAVG
Trigger: ACCAACAGCTCCCTCAATGCACTTCAGGCCCTCAGC...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTTCATGCAGTCTGCTCTaGCCGTCAGCTCTCTCACTG +
Preference number: 4 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVSCSLL*PSALSL
Trigger: CAGTGAGAGAGCTGACGGGCAGAGCAGACTGCATGA...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTTGCTGTCATGCAGTCTaGTCTGCCCGTCAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVCCHAV*SARQLS
Trigger: AGAGAGCTGACGGGCAGAGCAGACTGCATGACAGCA...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACAATCCAGGAGCTGTGCTaGTGGACTCCTGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTIQELC*WTPGSG
Trigger: ACCTGAGCCAGGAGTCCAGCAGCACAGCTCCTGGAT...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACACTGATCCAGGAGCTGTaGTGCTGGACTCCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTLIQEL*CWTPGS
Trigger: TGAGCCAGGAGTCCAGCAGCACAGCTCCTGGATCAG...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACAAGTTGTCCAGCTCACTaGCAGGCTGGTCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTSCPAH*QAGHQA
Trigger: AGCCTGGTGACCAGCCTGGCAGTGAGCTGGACAACT...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATGGTTTGGCAATAACCTaGCCAGTTGCCCTGGTCGTG +
Preference number: 4 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHGLAIT*PVALVV
Trigger: CACGACCAGGGCAACTGGGCAGGTTATTGCCAAACC...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR GCA 90 bp AGGCTCTATCAATCTCCTCCAGGCCATCAAAATTCCGCAAGGCCAGATACAGCTAAAACGGGCGCCTTCTaGTCCAGCATGATGTTGGAA +
Preference number: 4 (lower is better)
Translates to: RLYQSPPGHQNSARPDTAKTGAF*SSMMLE
Trigger: TTCCAACATCATGCTGGAGCAGAAGGCGCCCGTTTT...AGCTGTATCTGGCCTTGCGGAATTTTGATGGCCTGGAGGAGATTGATAGAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGCCGCCCATGTTCCCCTaGGCCCATCCATTTATGTCG +
Preference number: 4 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWPPMFP*AHPFMS
Trigger: CGACATAAATGGATGGGCGCAGGGGAACATGGGCGG...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATGGTTCATGCTGCTCATaGCACCTGTGTTGGTCGCCA +
Preference number: 4 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHGSCCS*HLCWSP
Trigger: TGGCGACCAACACAGGTGGCATGAGCAGCATGAACC...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATGCAGGATCATTAACCTaGTCGGGACCCATGGAGGAC +
Preference number: 4 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHAGSLT*SGPMED
Trigger: GTCCTCCATGGGTCCCGAGCAGGTTAATGATCCTGC...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR GCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATGGTTTGGGAACAGGTTaGCTCCCCTCAGAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHGLGTG*LPSEQD
Trigger: ATCCTGCTCTGAGGGGAGGCAACCTGTTCCCAAACC...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTCCCAGCCTGGTTTCATaGCTGCTCTCATGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: KVEPFEGIYELVATEKCCPSLVS*LLSWCW
Trigger: CCAGCACCATGAGAGCAGCCATGAAACCAGGCTGGG...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGGGAAAACTGACTGGGTaGGATTCGAGGGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWGKLTG*DSRAAS
Trigger: GCTGGCAGCCCTCGAATCCCACCCAGTCAGTTTTCC...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp CTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTGTCATATTCAACGCAGCTGCAGGAGTTTaGTCTGCCCTTTGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: LIVAGIPLGATMLGVIFNAAAGV*SALCCH
Trigger: ATGACAGCAAAGGGCAGACCAAACTCCTGCAGCTGC...GTTGAATATGACACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACACAGGAGCTGTGCTGCTaGACTCCTGGCTCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTQELCC*TPGSGL
Trigger: AAGACCTGAGCCAGGAGTCCAGCAGCACAGCTCCTG...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp CGTGATATGAAGCCACTGGGTTGCTTCTCCTTGGGCACTCACCTGCTCGGGACCAGACTCTTTCCAACATaGTCTTTAGAGCTTTCTAGA +
Preference number: 4 (lower is better)
Translates to: RDMKPLGCFSLGTHLLGTRLFPT*SLELSR
Trigger: TCTAGAAAGCTCTAAAGACCATGTTGGAAAGAGTCT...GGTCCCGAGCAGGTGAGTGCCCAAGGAGAAGCAACCCAGTGGCTTCATATCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CAA 72 bp CTGGGGAGTCGTAGCCCCAGTAAAGCCTGGATCAGGTaGCTGACTTATTCCGTAGTTTGGAGGAAATGGAAA +
Preference number: 4 (lower is better)
Translates to: LGSRSPSKAWIR*LTYSVVWRKWK
Trigger: TTTCCATTTCCTCCAAACTACGGAATAAGTCAGCAACCTGATCCAGGCTTTACTGGGGCTACGACTCCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR TCA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACACCAGCATCCGACAATTaGAGGTATGGCTGTTCCGCC +
Preference number: 4 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTPASDN*RYGCSA
Trigger: GGCGGAACAGCCATACCTTCAATTGTCGGATGCTGG...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR TCA 90 bp GTTTGGAGGAAATGGAAACTGCTGTGCATTTGCCTGGGGAATCCGAGGGTTGCTAGGGGCTGTTCATTTTaGGTGCATAGTTACTACCCT +
Preference number: 4 (lower is better)
Translates to: VWRKWKLLCICLGNPRVARGCSF*VHSYYP
Trigger: AGGGTAGTAACTATGCACTCAAAATGAACAGCCCCT...AGCAACCCTCGGATTCCCCAGGCAAATGCACAGCAGTTTCCATTTCCTCCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR TCA 90 bp ACTGCTCACACTAGAAATACAAACATCAATGCAGGTGAACAAAGTGATGTTCAGCCCTCGCTGAGGGCCTaGAGTGCATTGAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: TAHTRNTNINAGEQSDVQPSLRA*SALREL
Trigger: CAGCTCCCTCAATGCACTTCAGGCCCTCAGCGAGGG...CTGAACATCACTTTGTTCACCTGCATTGATGTTTGTATTTCTAGTGTGAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR TCA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTGGCCATGGGGCAGTCTaGTTTGGAGGAGCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: KVEPFEGIYELVATEKCCGHGAV*FGGACC
Trigger: ACAACAAGCTCCTCCAAATCAGACTGCCCCATGGCC...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR TCA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACACTGCTTGGCTCTGGCTaGCCAGTTCGGGTATTCCTA +
Preference number: 4 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTLLGSG*PVRVFL
Trigger: TAGGAATACCCGAACTGGTCAGCCAGAGCCAAGCAG...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR TCA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGTGGGCCATTTGTGCCTaGGATGCATACTGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWWAICA*DAYCCG
Trigger: CCCACAGCAGTATGCATCTCAGGCACAAATGGCCCA...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR TCA 90 bp TCTCCTCCAGGCCATCAAAATTCCGCAAGGCCAGATACAGCTGGTCCAGGAGAGAATCATTCTGCTCTGTaGAATTCGCAGTGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: SPPGHQNSARPDTAGPGENHSAL*NSQCCF
Trigger: AAAACAGCACTGCGAATTTCACAGAGCAGAATGATT...CTCTCCTGGACCAGCTGTATCTGGCCTTGCGGAATTTTGATGGCCTGGAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATGGTCAGGACATTCCTTaGGCTTTCTTGTCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHGQDIP*AFLSLP
Trigger: GGGCAGAGACAAGAAAGCGCAAGGAATGTCCTGACC...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTACCTGCCCATGGGCATaGCCATTTGTTCCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: KVEPFEGIYELVATEKCCTCPWA*PFVPLG
Trigger: GCCCAAAGGAACAAATGGGCATGCCCATGGGCAGGT...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR GCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATCAGAACCACCAAACCTaGCCATGGGCATGCCCATTT +
Preference number: 4 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHQNHQT*PWACPF
Trigger: AAATGGGCATGCCCATGGGCAGGTTTGGTGGTTCTG...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTCCAGGGCTCATGCGATaGCTTGGTGAAAGCATGGAG +
Preference number: 4 (lower is better)
Translates to: KVEPFEGIYELVATEKCCPGLMR*LGESME
Trigger: CTCCATGCTTTCACCAAGGCATCGCATGAGCCCTGG...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR GCA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTCTCCAGGATGGCAGCTaGTCTCTGCTTGTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: KVEPFEGIYELVATEKCCLQDGS*SLLVQL
Trigger: CAACTGGACAAGCAGAGAGCAGCTGCCATCCTGGAG...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR GCA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGTCATGCAGTCTGCTCTaGCCGTCAGCTCTCTCACTG +
Preference number: 4 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWSCSLL*PSALSL
Trigger: CAGTGAGAGAGCTGACGGGCAGAGCAGACTGCATGA...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACATGCCCTTTGCTGTCATaGAGTCTGCTCTGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTCPLLS*SLLCPS
Trigger: TGACGGGCAGAGCAGACTGCATGACAGCAAAGGGCA...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACATTGGTGGTCAGCAGCTaGAGGAGTTTGGTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTLVVSS*RSLVCP
Trigger: AGGGCAGACCAAACTCCTGCAGCTGCTGACCACCAA...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp ATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCAAAGTGAGTGGCTGGCGATTCTaGTGTGCTTGGAGGCGATGC +
Preference number: 4 (lower is better)
Translates to: IDVHVVTVHAGVCLLPKVSGWRF*CAWRRC
Trigger: GCATCGCCTCCAAGCACAGCAGAATCGCCAGCCACT...CACTTTGGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp CTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTGTCATATTCAACAAACTGCTGTGCATTTaGCTGGGGAATCCGAGGGTT +
Preference number: 4 (lower is better)
Translates to: LIVAGIPLGATMLGVIFNKLLCI*LGNPRV
Trigger: AACCCTCGGATTCCCCAGGCAAATGCACAGCAGTTT...GTTGAATATGACACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTAGAGGCAGCTCCTCCTaGCACAGCCGAGTGGACGCC +
Preference number: 4 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFRGSSS*HSRVDA
Trigger: GGCGTCCACTCGGCTGTGGCAGGAGGAGCTGCCTCT...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATTCATGGCTGCTCTCATaGTGCTGGTATCCAGAGACG +
Preference number: 4 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHSWLLS*CWYPET
Trigger: CGTCTCTGGATACCAGCACCATGAGAGCAGCCATGA...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCACCAAACCTGCCCATaGGCATGCCCATTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVHQTCP*ACPFVP
Trigger: AGGAACAAATGGGCATGCCCATGGGCAGGTTTGGTG...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTGCCTTGGTGAAAGCATaGAGGTGGGCTGTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: KVEPFEGIYELVATEKCCALVKA*RWAVLD
Trigger: ATCCAGGACAGCCCACCTCCATGCTTTCACCAAGGC...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp ACTGCTCACACTAGAAATACAAACATCAATGCAGGTGAACAAAGTGATGTTCAGTCCAGCAGGGGCGCCTaGCCTCGTGTCTGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: TAHTRNTNINAGEQSDVQSSRGA*PRVWEK
Trigger: CTTTTCCCAGACACGAGGCCAGGCGCCCCTGCTGGA...CTGAACATCACTTTGTTCACCTGCATTGATGTTTGTATTTCTAGTGTGAGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATCGCAGTGCTGTTTTCTaGGCTCCAACAGGTGTGACA +
Preference number: 4 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHRSAVF*APTGVT
Trigger: TGTCACACCTGTTGGAGCCCAGAAAACAGCACTGCG...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTCATACCTCCTTGGACTaGCCGGTTCATGGCACTGGT +
Preference number: 4 (lower is better)
Translates to: KVEPFEGIYELVATEKCCHTSLD*PVHGTG
Trigger: ACCAGTGCCATGAACCGGCCAGTCCAAGGAGGTATG...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTGATGCTTTCAGGCCATaGGGCAGTCTGATTTGGAGG +
Preference number: 4 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVDAFRP*GSLIWR
Trigger: CCTCCAAATCAGACTGCCCCATGGCCTGAAAGCATC...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATAGATGCATACTGCTGTaGGAAAACGGGCGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHRCILL*ENGRLL
Trigger: CAGAAGGCGCCCGTTTTCCCACAGCAGTATGCATCT...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp GTTTGGAGGAAATGGAAACTGCTGTGCATTTGCCTGGGGAATCCGAGGGTTGCTGATTTGATTCATAAGTaGCTGGCGATTCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: VWRKWKLLCICLGNPRVADLIHK*LAILLC
Trigger: GCACAGCAGAATCGCCAGCCACTTATGAATCAAATC...AGCAACCCTCGGATTCCCCAGGCAAATGCACAGCAGTTTCCATTTCCTCCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTTGCTGTGCATTTGCCTaGGGAATCCGAGGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: KVEPFEGIYELVATEKCCCCAFA*GIRGLL
Trigger: GAGCAACCCTCGGATTCCCCAGGCAAATGCACAGCA...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATCCTGATAGGCTGGGTTaGCCTGAGACTGTTGCATCA +
Preference number: 4 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHPDRLG*PETVAS
Trigger: TGATGCAACAGTCTCAGGCCAACCCAGCCTATCAGG...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATTCCATTCCAGGCAGCTaGTTTGGGAACAGGTTGCCT +
Preference number: 4 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHSIPGS*FGNRLP
Trigger: AGGCAACCTGTTCCCAAACCAGCTGCCTGGAATGGA...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR TCA 90 bp TCATCACTCGGAGACTCAGCTGCAGGATGTGGACATAGCAAGTCATCTGGAGAACCATCCCACTCATCTTaGACACATATCAGCAACTGT +
Preference number: 4 (lower is better)
Translates to: SSLGDSAAGCGHSKSSGEPSHSS*THISNC
Trigger: ACAGTTGCTGATATGTGTTCAAGATGAGTGGGATGG...TTCTCCAGATGACTTGCTATGTCCACATCCTGCAGCTGAGTCTCCGAGTGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR TCA 90 bp GGACACATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCTTGGCAGCAGGTTTTTaGCAAATTCCGTGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: GHIDVHVVTVHAGVCLLPLAAGF*QIPCGP
Trigger: GGGACCACACGGAATTTGTCAAAAACCTGCTGCCAA...GGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAATGTGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR TCA 90 bp ATCCGAGGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTAACGATAGATTTGACTaGATGCCAATCCTTGTCTCA +
Preference number: 4 (lower is better)
Translates to: IRGLLIVAGIPLGATMLGNDRFD*MPILVS
Trigger: TGAGACAAGGATTGGCATTCAGTCAAATCTATCGTT...ACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCCTCGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR TCA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACAGGGCCTGAAGTGCATTaGGGGAGCTGTTGGTATAAC +
Preference number: 4 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTGPEVH*GSCWYN
Trigger: GTTATACCAACAGCTCCCTCAATGCACTTCAGGCCC...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR TCA 90 bp AGGCTCTATCAATCTCCTCCAGGCCATCAAAATTCCGCAAGGCCAGATACAGCTGTTGGAATCCTGACTTaGGAACTGTTCTGGATCTAC +
Preference number: 4 (lower is better)
Translates to: RLYQSPPGHQNSARPDTAVGILT*ELFWIY
Trigger: GTAGATCCAGAACAGTTCTCAAGTCAGGATTCCAAC...AGCTGTATCTGGCCTTGCGGAATTTTGATGGCCTGGAGGAGATTGATAGAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR TCA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTCATGGAGGACAGCCCTaGCGTAGGCACGGAGGTCAC +
Preference number: 4 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFHGGQP*RRHGGH
Trigger: GTGACCTCCGTGCCTACGTCAGGGCTGTCCTCCATG...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR TCA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTAGACTGGAAGTGTTTTaGGCAAGTGAGCCCGGTCAG +
Preference number: 4 (lower is better)
Translates to: KVEPFEGIYELVATEKCCRLEVF*ASEPGQ
Trigger: CTGACCGGGCTCACTTGCTCAAAACACTTCCAGTCT...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR TCA 90 bp AGGCTCTATCAATCTCCTCCAGGCCATCAAAATTCCGCAAGGCCAGATACAGCTGGGAAGAAGAGATGCTaGTTCAAGCTGTCTGATCAA +
Preference number: 4 (lower is better)
Translates to: RLYQSPPGHQNSARPDTAGKKRC*FKLSDQ
Trigger: TTGATCAGACAGCTTGAATCAGCATCTCTTCTTCCC...AGCTGTATCTGGCCTTGCGGAATTTTGATGGCCTGGAGGAGATTGATAGAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR TCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATCGGAGCCCCTATAAGTaGCACAACCCCAGAAATCAA +
Preference number: 4 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHRSPYK*HNPRNQ
Trigger: TTGATTTCTGGGGTTGTGTCACTTATAGGGGCTCCG...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACAGCCTGGTTTCATGGCTaGTCTCATGGTGCTGGTATC +
Preference number: 4 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTAWFHG*SHGAGI
Trigger: GATACCAGCACCATGAGAGCAGCCATGAAACCAGGC...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTGATTCATGCCAGGGCTaGTTTGTGAGGGGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: KVEPFEGIYELVATEKCCDSCQG*FVRGCS
Trigger: TGAACAGCCCCTCACAAAGCAGCCCTGGCATGAATC...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR GCA 90 bp GTTTGGAGGAAATGGAAACTGCTGTGCATTTGCCTGGGGAATCCGAGGGTTGCTGGGAGTTTTGCAAATTaGCCATTTTTAGGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: VWRKWKLLCICLGNPRVAGSFAN*PFLGLV
Trigger: CACCAGACCTAAAAATGGGCAATTTGCAAAACTCCC...AGCAACCCTCGGATTCCCCAGGCAAATGCACAGCAGTTTCCATTTCCTCCAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp ATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCAAAGTGTTGGTGGTCAGCAGCTaGAGGAGTTTGGTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: IDVHVVTVHAGVCLLPKVLVVSS*RSLVCP
Trigger: AGGGCAGACCAAACTCCTGCAGCTGCTGACCACCAA...CACTTTGGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACAACCCTGGGCCATTTGTaGCTGAGATGCATACTGCTG +
Preference number: 4 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTTLGHL*LRCILL
Trigger: CAGCAGTATGCATCTCAGGCACAAATGGCCCAGGGT...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATAAACTGCTGTGCATTTaGCTGGGGAATCCGAGGGTT +
Preference number: 4 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHKLLCI*LGNPRV
Trigger: AACCCTCGGATTCCCCAGGCAAATGCACAGCAGTTT...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACAGAGCGACTGTCTGGATaGGAGCTTCAGACTGTCAAG +
Preference number: 4 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTERLSG*ELQTVK
Trigger: CTTGACAGTCTGAAGCTCGCATCCAGACAGTCGCTC...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTTACTACCCTGAGGAGTaGTTGCTTGCATGCCTGACA +
Preference number: 4 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVYYPEE*LLACLT
Trigger: TGTCAGGCATGCAAGCAACCACTCCTCAGGGTAGTA...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACAGCAGCTGCAGGAGTTTaGTCTGCCCTTTGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTAAAGV*SALCCH
Trigger: ATGACAGCAAAGGGCAGACCAAACTCCTGCAGCTGC...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTTCTGCTGTTAACTTaGCCAAGTCCACAGGGGAAC +
Preference number: 4 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVLLLLT*PSPQGN
Trigger: GTTCCCCTGTGGACTTGGCCAAGTTAACAGCAGAAG...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATCTGGCAAAAGACGCCTaGTCTATAGGCAGGATGCTT +
Preference number: 4 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHLAKDA*SIGRML
Trigger: AAGCATCCTGCCTATAGACCAGGCGTCTTTTGCCAG...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATAATAGGTGCCTGTGTTaGTACTCCAGGCCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHNRCLC*YSRPQS
Trigger: ACTCTGAGGCCTGGAGTACCAACACAGGCACCTATT...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACATTGCTGCCCAAAGTGTaGTGGGGACTGCTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTLLPKV*WGLLGK
Trigger: TTTTCCCAGCAGTCCCCACCACACTTTGGGCAGCAA...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGCGTTTTCTCCCATTTTaGAGGCCAGAGTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWRFLPF*RPELLG
Trigger: CCCCAGCAACTCTGGCCTCCAAAATGGGAGAAAACG...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR TCA 90 bp ATCCGAGGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTCTTTCTCTTGTTCTTTaGTCTGACGAATTTGCTTCA +
Preference number: 4 (lower is better)
Translates to: IRGLLIVAGIPLGATMLGLSLVL*SDEFAS
Trigger: TGAAGCAAATTCGTCAGATCAAAGAACAAGAGAAAG...ACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCCTCGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR TCA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTTTGATGGACTTTGGTTaGGAGACAGCGAAGCACTGC +
Preference number: 4 (lower is better)
Translates to: KVEPFEGIYELVATEKCCLMDFG*ETAKHC
Trigger: GCAGTGCTTCGCTGTCTCTCAACCAAAGTCCATCAA...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR TCA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTTGGTATCCAGAGACGTaGTCTTGCCTTGGAGATCCT +
Preference number: 4 (lower is better)
Translates to: KVEPFEGIYELVATEKCCWYPET*SCLGDP
Trigger: AGGATCTCCAAGGCAAGATCACGTCTCTGGATACCA...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR TCA 90 bp CTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTGTCATATTCAACTTTAATAGTCACTTCTaGTCCAGGAGCTGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LIVAGIPLGATMLGVIFNFNSHF*SRSCAA
Trigger: AGCAGCACAGCTCCTGGATCAGAAGTGACTATTAAA...GTTGAATATGACACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR TCA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTAGGGACTACTGTTTCTaGTTGGTGGGAAAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: KVEPFEGIYELVATEKCCRDYCF*LVGKVQ
Trigger: CTGGACCTTTCCCACCAATCAGAAACAGTAGTCCCT...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR TCA 90 bp AGGCTCTATCAATCTCCTCCAGGCCATCAAAATTCCGCAAGGCCAGATACAGCTATGATGTTGGAATCCTaGCTTGAGAACTGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: RLYQSPPGHQNSARPDTAMMLES*LENCSG
Trigger: TCCAGAACAGTTCTCAAGTCAGGATTCCAACATCAT...AGCTGTATCTGGCCTTGCGGAATTTTGATGGCCTGGAGGAGATTGATAGAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR TCA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTCGCTGTCCCATGGTGTaGAAGTTTGGATCTTGCATG +
Preference number: 4 (lower is better)
Translates to: KVEPFEGIYELVATEKCCRCPMV*KFGSCM
Trigger: CATGCAAGATCCAAACTTTCACACCATGGGACAGCG...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR TCA 90 bp AGGCTCTATCAATCTCCTCCAGGCCATCAAAATTCCGCAAGGCCAGATACAGCTGAAACATTGCTGATTTaGTTCATAAGTGGCTGGCGA +
Preference number: 4 (lower is better)
Translates to: RLYQSPPGHQNSARPDTAETLLI*FISGWR
Trigger: TCGCCAGCCACTTATGAATCAAATCAGCAATGTTTC...AGCTGTATCTGGCCTTGCGGAATTTTGATGGCCTGGAGGAGATTGATAGAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp GGACACATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCTTGTCGATGACACCCTaGCCTGTAGAGGATACATCT +
Preference number: 4 (lower is better)
Translates to: GHIDVHVVTVHAGVCLLPLSMTP*PVEDTS
Trigger: AGATGTATCCTCTACAGGGCAGGGTGTCATCGACAA...GGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAATGTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCATGGGAACTCTTCTTaGCACGCAAATCAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVHGNSS*HANQAG
Trigger: TCCTGCTTGATTTGCGTGGCAAGAAGAGTTCCCATG...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTTATGGCTATTTCCTGTaGTGCTGCAAACTCCCACAG +
Preference number: 4 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVYGYFL*CCKLPQ
Trigger: CTGTGGGAGTTTGCAGCAGCACAGGAAATAGCCATA...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTATGGCAGCTGCTCTCTaGTTGTCCAGTTGTACCTTC +
Preference number: 4 (lower is better)
Translates to: KVEPFEGIYELVATEKCCMAAAL*LSSCTF
Trigger: GAAGGTACAACTGGACAAGCAGAGAGCAGCTGCCAT...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR GCA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGCTCCAGGATGGCAGCTaGTCTCTGCTTGTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: VVISAINLNTLAFSPILELQDGS*SLLVQL
Trigger: CAACTGGACAAGCAGAGAGCAGCTGCCATCCTGGAG...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTGTTTGGTCTGCCCTTTaGTGTCATGCAGTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: KVEPFEGIYELVATEKCCVWSAL*CHAVCS
Trigger: AGAGCAGACTGCATGACAGCAAAGGGCAGACCAAAC...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR GCA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGCATGGGGATGCTGGCTaGTGGGTTCCGAATCATACC +
Preference number: 4 (lower is better)
Translates to: VVISAINLNTLAFSPILEHGDAG*WVPNHT
Trigger: GGTATGATTCGGAACCCAGCAGCCAGCATCCCCATG...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTTGTCTCTGTCGAAGATaGTGGTTCAGGATTTCCCTC +
Preference number: 4 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVCLCRR*WFRISL
Trigger: GAGGGAAATCCTGAACCAGCATCTTCGACAGAGACA...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp TCTCCTCCAGGCCATCAAAATTCCGCAAGGCCAGATACAGCTGGTCCAGGAGAGAAAATCTTAATCTTTTaGACTAGACTGTTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SPPGHQNSARPDTAGPGEKILIF*TRLLAR
Trigger: CCTGGCTAACAGTCTAGTGCAAAAGATTAAGATTTT...CTCTCCTGGACCAGCTGTATCTGGCCTTGCGGAATTTTGATGGCCTGGAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp GGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTGTCATATGTTACCAATCATTCTaGTCTGTGAAATTCGCAGTG +
Preference number: 4 (lower is better)
Translates to: GLLIVAGIPLGATMLGVICYQSF*SVKFAV
Trigger: CACTGCGAATTTCACAGAGCAGAATGATTGGTAACA...TATGACACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTTTCTTGTCTCTGCCCTaGAGGGGTCAGAGGTATTTT +
Preference number: 4 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVFLSLP*RGQRYF
Trigger: AAAATACCTCTGACCCCTCCAGGGCAGAGACAAGAA...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp ATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCAAAGTGTGTTCCTTTTGGGGCTaGGTCCAAGTTGGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: IDVHVVTVHAGVCLLPKVCSFWG*VQVGQD
Trigger: GTCCTGACCAACTTGGACCCAGCCCCAAAAGGAACA...CACTTTGGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGCAGGTCCTCCCAGCCTaGTTTCATGGCTGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: VVISAINLNTLAFSPILEQVLPA*FHGCSH
Trigger: ATGAGAGCAGCCATGAAACCAGGCTGGGAGGACCTG...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATGCTAATTGGATTCAGTaGCTTCCCCATCGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHANWIQ*LPHRLS
Trigger: GGACAAACGATGGGGAAGCCACTGAATCCAATTAGC...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp GGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTGTCATAGCCCATTTGTTCCTTTaGGCCATTTATGGGAAAATT +
Preference number: 4 (lower is better)
Translates to: GLLIVAGIPLGATMLGVIAHLFL*AIYGKI
Trigger: AATTTTCCCATAAATGGCCCAAAGGAACAAATGGGC...TATGACACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACATGCATGCCTGACACATaGTTCATTCCCCCAGAACCA +
Preference number: 4 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTCMPDT*FIPPEP
Trigger: TGGTTCTGGGGGAATGAACCATGTGTCAGGCATGCA...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGGCCTTGGTGAAAGCATaGAGGTGGGCTGTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: VVISAINLNTLAFSPILEALVKA*RWAVLD
Trigger: ATCCAGGACAGCCCACCTCCATGCTTTCACCAAGGC...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGTATCCGACAAAGAGCTaGCTAAGGGCGAGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: VVISAINLNTLAFSPILEYPTKS*LRARAP
Trigger: TGGAGCCCTCGCCCTTAGCCAGCTCTTTGTCGGATA...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATTCAGGTCTTTGCCTGTaGCTTCTGCTGTTAACTTGG +
Preference number: 4 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHSGLCL*LLLLTW
Trigger: CCAAGTTAACAGCAGAAGCCACAGGCAAAGACCTGA...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp ACTGCTCACACTAGAAATACAAACATCAATGCAGGTGAACAAAGTGATGTTCAGAGCTCACTGCCAGGCTaGTCACCAGGCTCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: TAHTRNTNINAGEQSDVQSSLPG*SPGSKL
Trigger: GAGCTTTGAGCCTGGTGACCAGCCTGGCAGTGAGCT...CTGAACATCACTTTGTTCACCTGCATTGATGTTTGTATTTCTAGTGTGAGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCAGTTGCCCTGGTCGTaGGTTATTAAAAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVQLPWS*VIKSAL
Trigger: CAGAGCACTTTTAATAACCCACGACCAGGGCAACTG...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGAGGTCCAGCACCAGTTaGGCTTTGCAATGTGATGTC +
Preference number: 4 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWRSSTS*ALQCDV
Trigger: GACATCACATTGCAAAGCCCAACTGGTGCTGGACCT...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACATGGGGCAGTCTGATTTaGAGGAGCTTGTTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTWGSLI*RSLLLA
Trigger: AGCCAACAACAAGCTCCTCCAAATCAGACTGCCCCA...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp ATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCAAAGTGAATGGCTGCCTGTTTTaGCTGGCAAAAGACGCCTGG +
Preference number: 4 (lower is better)
Translates to: IDVHVVTVHAGVCLLPKVNGCLF*LAKDAW
Trigger: CCAGGCGTCTTTTGCCAGCCAAAACAGGCAGCCATT...CACTTTGGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCTGTCGAAGATGCTaGTTCAGGATTTCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVLCRRC*FRISLC
Trigger: ACAGAGGGAAATCCTGAACCAGCATCTTCGACAGAG...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACAGTTGCTCATAGTTGCTaGCATACCACTAGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTVAHSC*HTTRSH
Trigger: GTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAAC...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTGAGACTGTTGCATCATaGGACTCTGTGTATGTGCCA +
Preference number: 4 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVETVAS*DSVYVP
Trigger: TGGCACATACACAGAGTCCCATGATGCAACAGTCTC...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp TCATCACTCGGAGACTCAGCTGCAGGATGTGGACATAGCAAGTCATCTGGAGAACATCTGTTCAGTAACTaGAGACTCTTTCCAACATGG +
Preference number: 4 (lower is better)
Translates to: SSLGDSAAGCGHSKSSGEHLFSN*RLFPTW
Trigger: CCATGTTGGAAAGAGTCTCCAGTTACTGAACAGATG...TTCTCCAGATGACTTGCTATGTCCACATCCTGCAGCTGAGTCTCCGAGTGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTTTTGGGTTCTGCAAGTaGATCTGTGCCACCCATTTC +
Preference number: 4 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVFGFCK*ICATHF
Trigger: GAAATGGGTGGCACAGATCCACTTGCAGAACCCAAA...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452400.7
3UTR CAA 72 bp CTGCTCATGCCACCTGTGTTGGTCGCCATGGACACATaGATGTTCATGTTGTTACTGTACATGCTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: LLMPPVLVAMDT*MFMLLLYMLVF
Trigger: AAACACCAGCATGTACAGTAACAACATGAACATCAATGTGTCCATGGCGACCAACACAGGTGGCATGAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR TCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATAGGGGCTGTTCATTTTaGGTGCATAGTTACTACCCT +
Preference number: 4 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHRGCSF*VHSYYP
Trigger: AGGGTAGTAACTATGCACTCAAAATGAACAGCCCCT...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR TCA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTCATGCGATGCCTTGGTaGAAGCATGGAGGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFHAMPW*KHGGGL
Trigger: CAGCCCACCTCCATGCTTTCACCAAGGCATCGCATG...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR TCA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTATGTGCCATTCGGGGTaGCATAAGTGGGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFMCHSG*HKWALG
Trigger: CCCCAGAGCCCACTTATGTCACCCCGAATGGCACAT...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR TCA 90 bp ATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCAAAGTGCTGAGGTCCAGGACATaGTCACTACAGCATATGCCA +
Preference number: 4 (lower is better)
Translates to: IDVHVVTVHAGVCLLPKVLRSRT*SLQHMP
Trigger: TGGCATATGCTGTAGTGATCATGTCCTGGACCTCAG...CACTTTGGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATTCATTTGTTTCCTTTTaGTCTCCAGGATGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHSFVSF*SPGWQL
Trigger: CAGCTGCCATCCTGGAGAGCAAAAGGAAACAAATGA...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGTGTCTCTGTCGAAGATaGTGGTTCAGGATTTCCCTC +
Preference number: 4 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWCLCRR*WFRISL
Trigger: GAGGGAAATCCTGAACCAGCATCTTCGACAGAGACA...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATCTTTTGTGCAGAGGATaGTTTGCTCTTAGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHLLCRG*FALRQH
Trigger: ATGCTGCCTAAGAGCAAAGCATCCTCTGCACAAAAG...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTTTCTTGTCTCTGCCCTaGAGGGGTCAGAGGTATTTT +
Preference number: 4 (lower is better)
Translates to: KVEPFEGIYELVATEKCCFLSLP*RGQRYF
Trigger: AAAATACCTCTGACCCCTCCAGGGCAGAGACAAGAA...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACATTTCAGTGTTCCTTTTaGGGCTGGGTCCAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTFQCSF*GWVQVG
Trigger: ACCAACTTGGACCCAGCCCCAAAAGGAACACTGAAA...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp TGCTTCTATAGTGATCAATATGATCAGAGGATTCCTTCACTTACTTTTCTTCTCGGTCATGTCCTGACCTaGGTTCCCACTGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: CFYSDQYDQRIPSLTFLLGHVLT*VPTAQG
Trigger: GCCCTGTGCAGTGGGAACCCAGGTCAGGACATGACC...GAGAAGAAAAGTAAGTGAAGGAATCCTCTGATCATATTGATCACTATAGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGCACCAAACCTGCCCATaGGCATGCCCATTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: VVISAINLNTLAFSPILEHQTCP*ACPFVP
Trigger: AGGAACAAATGGGCATGCCCATGGGCAGGTTTGGTG...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAAAACTGACTGGGTaGGATTCGAGGGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFGKLTG*DSRAAS
Trigger: GCTGGCAGCCCTCGAATCCCACCCAGTCAGTTTTCC...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTCAGGGGAAAACTGACTaGGTGGGATTCGAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFQGKTD*VGFEGC
Trigger: GCAGCCCTCGAATCCCACCCAGTCAGTTTTCCCCTG...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp ATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCAAAGTGCTTCTGCTGTTAACTTaGCCAAGTCCACAGGGGAAC +
Preference number: 4 (lower is better)
Translates to: IDVHVVTVHAGVCLLPKVLLLLT*PSPQGN
Trigger: GTTCCCCTGTGGACTTGGCCAAGTTAACAGCAGAAG...CACTTTGGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp ATCCGAGGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTTTAATTTTGTGTTACTaGCAGGATCTGTCTTACTGT +
Preference number: 4 (lower is better)
Translates to: IRGLLIVAGIPLGATMLGLILCY*QDLSYC
Trigger: ACAGTAAGACAGATCCTGCCAGTAACACAAAATTAA...ACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCCTCGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGCGCAGTGCTGTTTTCTaGGCTCCAACAGGTGTGACA +
Preference number: 4 (lower is better)
Translates to: VVISAINLNTLAFSPILERSAVF*APTGVT
Trigger: TGTCACACCTGTTGGAGCCCAGAAAACAGCACTGCG...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACAACTACTGTTTCTGATTaGTGGGAAAGGTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTTTVSD*WERSST
Trigger: GGTGCTGGACCTTTCCCACCAATCAGAAACAGTAGT...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGCCTCATGGGGATGCTaGCTGCTGGGTTCCGAATCA +
Preference number: 4 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFASWGC*LLGSES
Trigger: TGATTCGGAACCCAGCAGCCAGCATCCCCATGAGGC...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGTCTGGATCTACTGCTTaGCTCTGGCTGACCAGTTCG +
Preference number: 4 (lower is better)
Translates to: VVISAINLNTLAFSPILESGSTA*LWLTSS
Trigger: CGAACTGGTCAGCCAGAGCCAAGCAGTAGATCCAGA...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGAGGAGCCACCATGCTTaGTGTCATATTCAACCCTTG +
Preference number: 4 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWRSHHA*CHIQPL
Trigger: CAAGGGTTGAATATGACACCAAGCATGGTGGCTCCT...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTAGCCCCAGTAAAGCCTaGATCAGGTTGCTGACTTAT +
Preference number: 4 (lower is better)
Translates to: KVEPFEGIYELVATEKCCSPSKA*IRLLTY
Trigger: ATAAGTCAGCAACCTGATCCAGGCTTTACTGGGGCT...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGAGCCCCAGTAAAGCCTaGATCAGGTTGCTGACTTAT +
Preference number: 4 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWSPSKA*IRLLTY
Trigger: ATAAGTCAGCAACCTGATCCAGGCTTTACTGGGGCT...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGTGTGGTGGGGACTGCTaGGAAAACATGCTGTTTCCG +
Preference number: 4 (lower is better)
Translates to: VVISAINLNTLAFSPILECGGDC*ENMLFP
Trigger: CGGAAACAGCATGTTTTCCCAGCAGTCCCCACCACA...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTTCCAGGCAGCTGGTTTaGGAACAGGTTGCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFSRQLV*EQVASP
Trigger: AGGGGAGGCAACCTGTTCCCAAACCAGCTGCCTGGA...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTGGCTGGCAGGTCAGTTaGGTTGAAACAAATAGACAC +
Preference number: 4 (lower is better)
Translates to: KVEPFEGIYELVATEKCCGWQVS*VETNRH
Trigger: GTGTCTATTTGTTTCAACCCAACTGACCTGCCAGCC...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
3UTR CAA 72 bp CAAAGTTCGTTGCTGAACTTGCTGTTGCTGATGCATTaGTCTCTGTCGAAGATGCTGGTTCAGGATTTCCCT +
Preference number: 4 (lower is better)
Translates to: QSSLLNLLLLMH*SLSKMLVQDFP
Trigger: AGGGAAATCCTGAACCAGCATCTTCGACAGAGACAAATGCATCAGCAACAGCAAGTTCAGCAACGAACTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
3UTR CAA 72 bp ACTAGGAGCCACCATGCTTGGTGTCATATTCAACCCTaGTCCTCTCATCATCAAAGTTCGTTGCTGAACTTG +
Preference number: 4 (lower is better)
Translates to: TRSHHAWCHIQP*SSHHQSSLLNL
Trigger: CAAGTTCAGCAACGAACTTTGATGATGAGAGGACAAGGGTTGAATATGACACCAAGCATGGTGGCTCCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR TCA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGCCATCCCACTCATCTTaGACACATATCAGCAACTGT +
Preference number: 4 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWPSHSS*THISNC
Trigger: ACAGTTGCTGATATGTGTTCAAGATGAGTGGGATGG...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR TCA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTTCTCCTTCTTCTTTaGTGGACTTTGGTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVLLLLL*WTLVER
Trigger: TCTCTCAACCAAAGTCCATCAAAGAAGAAGGAGAAG...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR TCA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGGGTTCATTAGTAGTCTaGGAACGGATGAGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWGSLVV*ERMSLL
Trigger: GAGCAAACTCATCCGTTCTCAGACTACTAATGAACC...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR TCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATAATTTATATTGCTACTaGGGGTCATGTCCTGACCTG +
Preference number: 4 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHNLYCY*GSCPDL
Trigger: CAGGTCAGGACATGACCCTCAGTAGCAATATAAATT...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR TCA 90 bp GGACACATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCAATTTATATTGCTACTaGGGGTCATGTCCTGACCTG +
Preference number: 4 (lower is better)
Translates to: GHIDVHVVTVHAGVCLLPNLYCY*GSCPDL
Trigger: CAGGTCAGGACATGACCCTCAGTAGCAATATAAATT...GGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAATGTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR TCA 90 bp CATATAAATTGGATTTTATGTACCTTACAAAACTTCGGCTTAGTCAGCACTGCTGGGCTCCAACAGGTGTaGCAGGGCTGTTTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: HINWILCTLQNFGLVSTAGLQQV*QGCFQL
Trigger: CAGCTGAAAACAGCCCTGTCACACCTGTTGGAGCCC...AGCAGTGCTGACTAAGCCGAAGTTTTGTAAGGTACATAAAATCCAATTTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR TCA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGGTTGGAATCCTGACTTaGGAACTGTTCTGGATCTAC +
Preference number: 4 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWVGILT*ELFWIY
Trigger: GTAGATCCAGAACAGTTCTCAAGTCAGGATTCCAAC...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR TCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATATGATGTTGGAATCCTaGCTTGAGAACTGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHMMLES*LENCSG
Trigger: TCCAGAACAGTTCTCAAGTCAGGATTCCAACATCAT...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR TCA 90 bp CATATAAATTGGATTTTATGTACCTTACAAAACTTCGGCTTAGTCAGCACTGCTAGGCACGGAGGTCACTaGGGTCATGCTGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: HINWILCTLQNFGLVSTARHGGH*GHADLS
Trigger: GGACAGATCAGCATGACCTCAGTGACCTCCGTGCCT...AGCAGTGCTGACTAAGCCGAAGTTTTGTAAGGTACATAAAATCCAATTTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR TCA 90 bp TGCTTCTATAGTGATCAATATGATCAGAGGATTCCTTCACTTACTTTTCTTCTCGTGAGCCCGGTCAGCTaGAGAAGCAACTGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: CFYSDQYDQRIPSLTFLLVSPVS*RSNWLQ
Trigger: CTGAAGCCAGTTGCTTCTTCAGCTGACCGGGCTCAC...GAGAAGAAAAGTAAGTGAAGGAATCCTCTGATCATATTGATCACTATAGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR TCA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGGGGAAGAAGAGATGCTaGTTCAAGCTGTCTGATCAA +
Preference number: 4 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWGKKRC*FKLSDQ
Trigger: TTGATCAGACAGCTTGAATCAGCATCTCTTCTTCCC...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTGTGCAGCAACAAGAGTaGCATCAGACAAGGAAAAAC +
Preference number: 4 (lower is better)
Translates to: KVEPFEGIYELVATEKCCVQQQE*HQTRKN
Trigger: GTTTTTCCTTGTCTGATGGCACTCTTGTTGCTGCAC...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR GCA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACATTTGCTCTTCGTTTGTaGAGCAACAAGAGTGCCATC +
Preference number: 4 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTFALRL*SNKSAI
Trigger: GATGGCACTCTTGTTGCTGCACAAACGAAGAGCAAA...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGCTATTTCCTGTGCTaGTGCAAACTCCCACAGGGG +
Preference number: 4 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFGYFLC*CKLPQG
Trigger: CCCCTGTGGGAGTTTGCAGCAGCACAGGAAATAGCC...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGTCATTTGTTTCCTTTTaGTCTCCAGGATGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWSFVSF*SPGWQL
Trigger: CAGCTGCCATCCTGGAGAGCAAAAGGAAACAAATGA...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp TGCTTCTATAGTGATCAATATGATCAGAGGATTCCTTCACTTACTTTTCTTCTCATCCAGGAGCTGTGCTaGTGGACTCCTGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: CFYSDQYDQRIPSLTFLLIQELC*WTPGSG
Trigger: ACCTGAGCCAGGAGTCCAGCAGCACAGCTCCTGGAT...GAGAAGAAAAGTAAGTGAAGGAATCCTCTGATCATATTGATCACTATAGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR GCA 90 bp TGCTTCTATAGTGATCAATATGATCAGAGGATTCCTTCACTTACTTTTCTTCTCAGTTGTCCAGCTCACTaGCAGGCTGGTCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: CFYSDQYDQRIPSLTFLLSCPAH*QAGHQA
Trigger: AGCCTGGTGACCAGCCTGGCAGTGAGCTGGACAACT...GAGAAGAAAAGTAAGTGAAGGAATCCTCTGATCATATTGATCACTATAGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR GCA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTAGCCGAACTCTGCGGTaGCCATTCTCCAGATGGCAT +
Preference number: 4 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFSRTLR*PFSRWH
Trigger: ATGCCATCTGGAGAATGGGCACCGCAGAGTTCGGCT...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTCTCACAGCCGAACTCTaGGGTGCCCATTCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFLTAEL*GAHSPD
Trigger: ATCTGGAGAATGGGCACCGCAGAGTTCGGCTGTGAG...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp ACTGCTCACACTAGAAATACAAACATCAATGCAGGTGAACAAAGTGATGTTCAGCTGTTCTGGATCTACTaGTTGGCTCTGGCTGACCAG +
Preference number: 4 (lower is better)
Translates to: TAHTRNTNINAGEQSDVQLFWIY*LALADQ
Trigger: CTGGTCAGCCAGAGCCAAGCAGTAGATCCAGAACAG...CTGAACATCACTTTGTTCACCTGCATTGATGTTTGTATTTCTAGTGTGAGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR GCA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTCTGGCGATTCTGCTGTaGTTGGAGGCGATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFLAILL*LEAMLK
Trigger: CTTCAGCATCGCCTCCAAGCACAGCAGAATCGCCAG...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp CATATAAATTGGATTTTATGTACCTTACAAAACTTCGGCTTAGTCAGCACTGCTAGTGGCTGGCGATTCTaGTGTGCTTGGAGGCGATGC +
Preference number: 4 (lower is better)
Translates to: HINWILCTLQNFGLVSTASGWRF*CAWRRC
Trigger: GCATCGCCTCCAAGCACAGCAGAATCGCCAGCCACT...AGCAGTGCTGACTAAGCCGAAGTTTTGTAAGGTACATAAAATCCAATTTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGCTGGGCCAGCATCTGTaGATTAATAGGTGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: VVISAINLNTLAFSPILELGQHL*INRCLC
Trigger: ACACAGGCACCTATTAATGCACAGATGCTGGCCCAG...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp TGCTTCTATAGTGATCAATATGATCAGAGGATTCCTTCACTTACTTTTCTTCTCCCGCCCATGTTCCCCTaGGCCCATCCATTTATGTCG +
Preference number: 4 (lower is better)
Translates to: CFYSDQYDQRIPSLTFLLPPMFP*AHPFMS
Trigger: CGACATAAATGGATGGGCGCAGGGGAACATGGGCGG...GAGAAGAAAAGTAAGTGAAGGAATCCTCTGATCATATTGATCACTATAGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp ACTGCTCACACTAGAAATACAAACATCAATGCAGGTGAACAAAGTGATGTTCAGTGTTCCTTTTGGGGCTaGGTCCAAGTTGGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: TAHTRNTNINAGEQSDVQCSFWG*VQVGQD
Trigger: GTCCTGACCAACTTGGACCCAGCCCCAAAAGGAACA...CTGAACATCACTTTGTTCACCTGCATTGATGTTTGTATTTCTAGTGTGAGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACATTGACAAATTCCGTGTaGTCCCCAACATGCAAGATG +
Preference number: 4 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTLTNSV*SPTCKM
Trigger: CATCTTGCATGTTGGGGACCACACGGAATTTGTCAA...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGTCCCATCTTGCTGAGTaGGGGAGGATTCATATTAAC +
Preference number: 4 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWSHLAE*GRIHIN
Trigger: GTTAATATGAATCCTCCCCCACTCAGCAAGATGGGA...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTTATCCGACAAAGAGCTaGCTAAGGGCGAGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFYPTKS*LRARAP
Trigger: TGGAGCCCTCGCCCTTAGCCAGCTCTTTGTCGGATA...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp ACTGCTCACACTAGAAATACAAACATCAATGCAGGTGAACAAAGTGATGTTCAGCGAATCATACCTCCTTaGACTGGCCGGTTCATGGCA +
Preference number: 4 (lower is better)
Translates to: TAHTRNTNINAGEQSDVQRIIPP*TGRFMA
Trigger: TGCCATGAACCGGCCAGTCCAAGGAGGTATGATTCG...CTGAACATCACTTTGTTCACCTGCATTGATGTTTGTATTTCTAGTGTGAGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp TGCTTCTATAGTGATCAATATGATCAGAGGATTCCTTCACTTACTTTTCTTCTCGGGGATGCTGGCTGCTaGGTTCCGAATCATACCTCC +
Preference number: 4 (lower is better)
Translates to: CFYSDQYDQRIPSLTFLLGDAGC*VPNHTS
Trigger: GGAGGTATGATTCGGAACCCAGCAGCCAGCATCCCC...GAGAAGAAAAGTAAGTGAAGGAATCCTCTGATCATATTGATCACTATAGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp ACTGCTCACACTAGAAATACAAACATCAATGCAGGTGAACAAAGTGATGTTCAGGCTGCCTGTTTTGGCTaGCAAAAGACGCCTGGTCTA +
Preference number: 4 (lower is better)
Translates to: TAHTRNTNINAGEQSDVQAACFG*QKTPGL
Trigger: TAGACCAGGCGTCTTTTGCCAGCCAAAACAGGCAGC...CTGAACATCACTTTGTTCACCTGCATTGATGTTTGTATTTCTAGTGTGAGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATCTGATTGTGTATCTTTaGGTTCTGCAAGTGGATCTG +
Preference number: 4 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHLIVYL*VLQVDL
Trigger: CAGATCCACTTGCAGAACCCAAAGATACACAATCAG...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
3UTR CAA 72 bp CCTCAGAGTCAAGTTCACATTGGAAACATTGCTGATTaGATTCATAAGTGGCTGGCGATTCTGCTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: PQSQVHIGNIAD*IHKWLAILLCL
Trigger: CAAGCACAGCAGAATCGCCAGCCACTTATGAATCAAATCAGCAATGTTTCCAATGTGAACTTGACTCTGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR TCA 90 bp ACTGCTCACACTAGAAATACAAACATCAATGCAGGTGAACAAAGTGATGTTCAGAGCTTCCCATCTTGCTaGGTGGGGGAGGATTCATAT +
Preference number: 4 (lower is better)
Translates to: TAHTRNTNINAGEQSDVQSFPSC*VGEDSY
Trigger: ATATGAATCCTCCCCCACTCAGCAAGATGGGAAGCT...CTGAACATCACTTTGTTCACCTGCATTGATGTTTGTATTTCTAGTGTGAGCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR TCA 90 bp ACTGCTCACACTAGAAATACAAACATCAATGCAGGTGAACAAAGTGATGTTCAGCCTTCTGCTCCAGCATaGTGTTGGAATCCTGACTTG +
Preference number: 4 (lower is better)
Translates to: TAHTRNTNINAGEQSDVQPSAPA*CWNPDL
Trigger: CAAGTCAGGATTCCAACATCATGCTGGAGCAGAAGG...CTGAACATCACTTTGTTCACCTGCATTGATGTTTGTATTTCTAGTGTGAGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR TCA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGCTAGAGATACGACTGTaGCTTTGTTGGTCTTCACGC +
Preference number: 4 (lower is better)
Translates to: VVISAINLNTLAFSPILELEIRL*LCWSSR
Trigger: GCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAG...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGGAGTGGTTGCTTGCATaGCTGACACATGGTTCATTC +
Preference number: 4 (lower is better)
Translates to: VVISAINLNTLAFSPILEEWLLA*LTHGSF
Trigger: GAATGAACCATGTGTCAGGCATGCAAGCAACCACTC...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAATGCAAGCTTCCTaGAGGGGAAAACTGACTGGG +
Preference number: 4 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFGMQAS*RGKLTG
Trigger: CCCAGTCAGTTTTCCCCTGCAGGAAGCTTGCATTCC...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp GGACACATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCCTGTGCAAAATTTTATaGTTCTCCTTGAGCGAGGTT +
Preference number: 4 (lower is better)
Translates to: GHIDVHVVTVHAGVCLLPLCKIL*FSLSEV
Trigger: AACCTCGCTCAAGGAGAAGCATAAAATTTTGCACAG...GGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAATGTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp GGACACATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCTCCTGCAAGAGTCTGTaGAAAATTTTATGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GHIDVHVVTVHAGVCLLPSCKSL*KILCFS
Trigger: GGAGAAGCATAAAATTTTGCACAGACTCTTGCAGGA...GGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAATGTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACATCATTGATGATGGCTTaGTTGTCAACTGATCCAGCA +
Preference number: 4 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTSLMMA*LSTDPA
Trigger: TGCTGGATCAGTTGACAAGCAAGCCATCATCAATGA...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp TGCTTCTATAGTGATCAATATGATCAGAGGATTCCTTCACTTACTTTTCTTCTCCTCACAGCCGAACTCTaGGGTGCCCATTCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: CFYSDQYDQRIPSLTFLLLTAEL*GAHSPD
Trigger: ATCTGGAGAATGGGCACCGCAGAGTTCGGCTGTGAG...GAGAAGAAAAGTAAGTGAAGGAATCCTCTGATCATATTGATCACTATAGAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR GCA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGTGTATCTTTGGGTTCTaGAAGTGGATCTGTGCCACC +
Preference number: 4 (lower is better)
Translates to: VVISAINLNTLAFSPILECIFGF*KWICAT
Trigger: GGTGGCACAGATCCACTTGCAGAACCCAAAGATACA...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp AGGCTCTATCAATCTCCTCCAGGCCATCAAAATTCCGCAAGGCCAGATACAGCTTTCATCAGCTCTTCTTaGTTATACCTTAGATACTGT +
Preference number: 4 (lower is better)
Translates to: RLYQSPPGHQNSARPDTAFISSS*LYLRYC
Trigger: ACAGTATCTAAGGTATAACCAAGAAGAGCTGATGAA...AGCTGTATCTGGCCTTGCGGAATTTTGATGGCCTGGAGGAGATTGATAGAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATGCCCATTTGTTCCTTTaGGCCATTTATGGGAAAATT +
Preference number: 4 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHAHLFL*AIYGKI
Trigger: AATTTTCCCATAAATGGCCCAAAGGAACAAATGGGC...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp TGCTTCTATAGTGATCAATATGATCAGAGGATTCCTTCACTTACTTTTCTTCTCCGGCCGGGGGCAGGTTaGGGTCATTTGTTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: CFYSDQYDQRIPSLTFLLRPGAG*GHLFPF
Trigger: AAAAGGAAACAAATGACCCCAACCTGCCCCCGGCCG...GAGAAGAAAAGTAAGTGAAGGAATCCTCTGATCATATTGATCACTATAGAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGCCAGTCTCTCAAGTTTaGGGGTTATTTCTGGTAAAC +
Preference number: 4 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWPVSQV*GLFLVN
Trigger: GTTTACCAGAAATAACCCCCAAACTTGAGAGACTGG...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp ACTGCTCACACTAGAAATACAAACATCAATGCAGGTGAACAAAGTGATGTTCAGCCTGCCCAGTTGCCCTaGTCGTGGGTTATTAAAAGT +
Preference number: 4 (lower is better)
Translates to: TAHTRNTNINAGEQSDVQPAQLP*SWVIKS
Trigger: ACTTTTAATAACCCACGACCAGGGCAACTGGGCAGG...CTGAACATCACTTTGTTCACCTGCATTGATGTTTGTATTTCTAGTGTGAGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTAATGGCTGCCTGTTTTaGCTGGCAAAAGACGCCTGG +
Preference number: 4 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFNGCLF*LAKDAW
Trigger: CCAGGCGTCTTTTGCCAGCCAAAACAGGCAGCCATT...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTTCTGGATCTACTGCTTaGCTCTGGCTGACCAGTTCG +
Preference number: 4 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFSGSTA*LWLTSS
Trigger: CGAACTGGTCAGCCAGAGCCAAGCAGTAGATCCAGA...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGAGTTTGGATCTTGCATaGGAGAATAGCTACCCTGGG +
Preference number: 4 (lower is better)
Translates to: VVISAINLNTLAFSPILESLDLA*ENSYPG
Trigger: CCCAGGGTAGCTATTCTCCCATGCAAGATCCAAACT...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp GGACACATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCACTTATTCCGTAGTTTaGAGGAAATGGAAACTGCTG +
Preference number: 4 (lower is better)
Translates to: GHIDVHVVTVHAGVCLLPTYSVV*RKWKLL
Trigger: CAGCAGTTTCCATTTCCTCCAAACTACGGAATAAGT...GGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAATGTGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp CATATAAATTGGATTTTATGTACCTTACAAAACTTCGGCTTAGTCAGCACTGCTGACATAAGTGGGCTCTaGGGAGTCGTAGCCCCAGTA +
Preference number: 4 (lower is better)
Translates to: HINWILCTLQNFGLVSTADISGL*GVVAPV
Trigger: TACTGGGGCTACGACTCCCCAGAGCCCACTTATGTC...AGCAGTGCTGACTAAGCCGAAGTTTTGTAAGGTACATAAAATCCAATTTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGCATCTGTTCAGTAACTaGAGACTCTTTCCAACATGG +
Preference number: 4 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWHLFSN*RLFPTW
Trigger: CCATGTTGGAAAGAGTCTCCAGTTACTGAACAGATG...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACAGGATATATGAACTGGTaGCCACTGAGAAGTGTTGTT +
Preference number: 4 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTGYMNW*PLRSVV
Trigger: AACAACACTTCTCAGTGGCCACCAGTTCATATATCC...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
3UTR CAA 72 bp GCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTaGGAGGCCAGAGTTGCTGGGGAACAGAATAAACAT +
Preference number: 4 (lower is better)
Translates to: AINLNTLAFSPI*EARVAGEQNKH
Trigger: ATGTTTATTCTGTTCCCCAGCAACTCTGGCCTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR TCA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTTGTAGAGGATACATCTaGCTTCTGCACTTCATCTAT +
Preference number: 4 (lower is better)
Translates to: KVEPFEGIYELVATEKCCCRGYI*LLHFIY
Trigger: ATAGATGAAGTGCAGAAGTCAGATGTATCCTCTACA...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR TCA 90 bp ATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCAAAGTGTCCAAAACAGTCTTTTaGGTCCAAGCTTCCCATCTT +
Preference number: 4 (lower is better)
Translates to: IDVHVVTVHAGVCLLPKVSKTVF*VQASHL
Trigger: AAGATGGGAAGCTTGGACTCAAAAGACTGTTTTGGA...CACTTTGGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR TCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATAATCTGACATGGGTATaGAATTTGCCTGTCAACATT +
Preference number: 4 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHNLTWV*NLPVNI
Trigger: AATGTTGACAGGCAAATTTCATACCCATGTCAGATT...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR TCA 90 bp ACTGCTCACACTAGAAATACAAACATCAATGCAGGTGAACAAAGTGATGTTCAGCTAGAGATACGACTGTaGCTTTGTTGGTCTTCACGC +
Preference number: 4 (lower is better)
Translates to: TAHTRNTNINAGEQSDVQLEIRL*LCWSSR
Trigger: GCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAG...CTGAACATCACTTTGTTCACCTGCATTGATGTTTGTATTTCTAGTGTGAGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR GCA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACATGTGCCTGTAAACAGTaGAGAAGATCTATAAGTGTG +
Preference number: 4 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTCACKQ*RRSISV
Trigger: CACACTTATAGATCTTCTGCACTGTTTACAGGCACA...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp ACTGCTCACACTAGAAATACAAACATCAATGCAGGTGAACAAAGTGATGTTCAGGAGTGGTTGCTTGCATaGCTGACACATGGTTCATTC +
Preference number: 4 (lower is better)
Translates to: TAHTRNTNINAGEQSDVQEWLLA*LTHGSF
Trigger: GAATGAACCATGTGTCAGGCATGCAAGCAACCACTC...CTGAACATCACTTTGTTCACCTGCATTGATGTTTGTATTTCTAGTGTGAGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR GCA 90 bp ACTGCTCACACTAGAAATACAAACATCAATGCAGGTGAACAAAGTGATGTTCAGAATAACCTGCCCAGTTaGCCTGGTCGTGGGTTATTA +
Preference number: 4 (lower is better)
Translates to: TAHTRNTNINAGEQSDVQNNLPS*PGRGLL
Trigger: TAATAACCCACGACCAGGGCAACTGGGCAGGTTATT...CTGAACATCACTTTGTTCACCTGCATTGATGTTTGTATTTCTAGTGTGAGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR GCA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTAAAACGGGCGCCTTCTaGTCCAGCATGATGTTGGAA +
Preference number: 4 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFKTGAF*SSMMLE
Trigger: TTCCAACATCATGCTGGAGCAGAAGGCGCCCGTTTT...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTACCATAAAAGTGGCCTaGTTAGTAACATGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVTIKVA*LVTCSL
Trigger: AAGACTACATGTTACTAAGCAGGCCACTTTTATGGT...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR GCA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGTACACACATCTCAGATaGAACTTCATGAGGAACTGT +
Preference number: 4 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWYTHLR*NFMRNC
Trigger: ACAGTTCCTCATGAAGTTGCATCTGAGATGTGTGTA...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR GCA 90 bp CATATAAATTGGATTTTATGTACCTTACAAAACTTCGGCTTAGTCAGCACTGCTATGAAGCCACTGGGTTaGTTCTCCTTGGGCACTCAC +
Preference number: 4 (lower is better)
Translates to: HINWILCTLQNFGLVSTAMKPLG*FSLGTH
Trigger: GTGAGTGCCCAAGGAGAAGCAACCCAGTGGCTTCAT...AGCAGTGCTGACTAAGCCGAAGTTTTGTAAGGTACATAAAATCCAATTTATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGTTGACAAATTCCGTGTaGTCCCCAACATGCAAGATG +
Preference number: 4 (lower is better)
Translates to: VVISAINLNTLAFSPILELTNSV*SPTCKM
Trigger: CATCTTGCATGTTGGGGACCACACGGAATTTGTCAA...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGACGTGATCTTGCCTTaGAGATCCTGGCGAGTAGTA +
Preference number: 4 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFDVILP*RSWRVV
Trigger: TACTACTCGCCAGGATCTCCAAGGCAAGATCACGTC...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTTCTACTGCTTGGCTCTaGCTGACCAGTTCGGGTATT +
Preference number: 4 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFSTAWL*LTSSGI
Trigger: AATACCCGAACTGGTCAGCCAGAGCCAAGCAGTAGA...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTAATAGGTGCCTGTGTTaGTACTCCAGGCCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFNRCLC*YSRPQS
Trigger: ACTCTGAGGCCTGGAGTACCAACACAGGCACCTATT...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGTTGCTCATAGTTGCTaGCATACCACTAGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFVAHSC*HTTRSH
Trigger: GTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAAC...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp CATATAAATTGGATTTTATGTACCTTACAAAACTTCGGCTTAGTCAGCACTGCTTCTAGCAGAACCGGCTaGCAGGTCAGTTGGGTTGAA +
Preference number: 4 (lower is better)
Translates to: HINWILCTLQNFGLVSTASSRTG*QVSWVE
Trigger: TTCAACCCAACTGACCTGCCAGCCGGTTCTGCTAGA...AGCAGTGCTGACTAAGCCGAAGTTTTGTAAGGTACATAAAATCCAATTTATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGCAAGAAACCAGTGTCTaGAACCGAACAGGAACAGAA +
Preference number: 4 (lower is better)
Translates to: VVISAINLNTLAFSPILEQETSV*NRTGTE
Trigger: TTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTG...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp TGCTTCTATAGTGATCAATATGATCAGAGGATTCCTTCACTTACTTTTCTTCTCCGTTTTCTCCCATTTTaGAGGCCAGAGTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: CFYSDQYDQRIPSLTFLLRFLPF*RPELLG
Trigger: CCCCAGCAACTCTGGCCTCCAAAATGGGAGAAAACG...GAGAAGAAAAGTAAGTGAAGGAATCCTCTGATCATATTGATCACTATAGAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATATAAAAATCAAGAATTaGTTCCTACAGCGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHIKIKN*FLQRLH
Trigger: ATGCAGCCGCTGTAGGAACCAATTCTTGATTTTTAT...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTTCAGTTTCTTGGTATTaGAGTTGTCTGAAACTGACA +
Preference number: 4 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVSVSWY*SCLKLT
Trigger: TGTCAGTTTCAGACAACTCCAATACCAAGAAACTGA...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp ACTGCTCACACTAGAAATACAAACATCAATGCAGGTGAACAAAGTGATGTTCAGGGCAACCCAATGGTTTaGTGGAGAAAAGTAGAGCCT +
Preference number: 4 (lower is better)
Translates to: TAHTRNTNINAGEQSDVQGNPMV*WRKVEP
Trigger: AGGCTCTACTTTTCTCCACCAAACCATTGGGTTGCC...CTGAACATCACTTTGTTCACCTGCATTGATGTTTGTATTTCTAGTGTGAGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR TCA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGAAAAGCTGTGGTAATTaGCTATTCTGCAAATCATCC +
Preference number: 4 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWKSCGN*LFCKSS
Trigger: GGATGATTTGCAGAATAGTCAATTACCACAGCTTTT...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACAATAGATTTGACTGAATaGCAATCCTTGTCTCAGTAC +
Preference number: 4 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTIDLTE*QSLSQY
Trigger: GTACTGAGACAAGGATTGGCATTCAGTCAAATCTAT...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGTCATTGATGATGGCTTaGTTGTCAACTGATCCAGCA +
Preference number: 4 (lower is better)
Translates to: VVISAINLNTLAFSPILESLMMA*LSTDPA
Trigger: TGCTGGATCAGTTGACAAGCAAGCCATCATCAATGA...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACATACCAATCATTCCTGTaGTACTGTTCCCTAAATTTC +
Preference number: 4 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTYQSFL*YCSLNF
Trigger: GAAATTTAGGGAACAGTAGCACAGGAATGATTGGTA...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR GCA 90 bp ACTGCTCACACTAGAAATACAAACATCAATGCAGGTGAACAAAGTGATGTTCAGCATTTGTGCCTGAGATaGATACTGCTGTGGGAAAAC +
Preference number: 4 (lower is better)
Translates to: TAHTRNTNINAGEQSDVQHLCLR*ILLWEN
Trigger: GTTTTCCCACAGCAGTATGCATCTCAGGCACAAATG...CTGAACATCACTTTGTTCACCTGCATTGATGTTTGTATTTCTAGTGTGAGCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR GCA 90 bp TGCTTCTATAGTGATCAATATGATCAGAGGATTCCTTCACTTACTTTTCTTCTCGTACATGCTGGTGTTTaGTTGCTGCCCAAAGTGTGG +
Preference number: 4 (lower is better)
Translates to: CFYSDQYDQRIPSLTFLLVHAGV*LLPKVW
Trigger: CCACACTTTGGGCAGCAAGCAAACACCAGCATGTAC...GAGAAGAAAAGTAAGTGAAGGAATCCTCTGATCATATTGATCACTATAGAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR GCA 90 bp ATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCAAAGTGGGTTCCTACAGCGGCTaGATATCATATAGATTAGAT +
Preference number: 4 (lower is better)
Translates to: IDVHVVTVHAGVCLLPKVGSYSG*ISYRLD
Trigger: ATCTAATCTATATGATATGCAGCCGCTGTAGGAACC...CACTTTGGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CCA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGTTCTTTGATGGACTTTaGTTGAGAGACAGCGAAGCA +
Preference number: 4 (lower is better)
Translates to: VVISAINLNTLAFSPILEFFDGL*LRDSEA
Trigger: TGCTTCGCTGTCTCTCAACCAAAGTCCATCAAAGAA...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp TGCTTCTATAGTGATCAATATGATCAGAGGATTCCTTCACTTACTTTTCTTCTCGACGTGATCTTGCCTTaGAGATCCTGGCGAGTAGTA +
Preference number: 4 (lower is better)
Translates to: CFYSDQYDQRIPSLTFLLDVILP*RSWRVV
Trigger: TACTACTCGCCAGGATCTCCAAGGCAAGATCACGTC...GAGAAGAAAAGTAAGTGAAGGAATCCTCTGATCATATTGATCACTATAGAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTCAGGCAAGCTACCTGTaGAGTCTTTGTTTGTATCCG +
Preference number: 4 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFQASYL*SLCLYP
Trigger: CGGATACAAACAAAGACTCCACAGGTAGCTTGCCTG...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTACTGTTTCTGATTGGTaGGAAAGGTCCAGCACCAGT +
Preference number: 4 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFTVSDW*ERSSTS
Trigger: ACTGGTGCTGGACCTTTCCCACCAATCAGAAACAGT...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp TGCTTCTATAGTGATCAATATGATCAGAGGATTCCTTCACTTACTTTTCTTCTCCTGGCAAAAGACGCCTaGTCTATAGGCAGGATGCTT +
Preference number: 4 (lower is better)
Translates to: CFYSDQYDQRIPSLTFLLLAKDA*SIGRML
Trigger: AAGCATCCTGCCTATAGACCAGGCGTCTTTTGCCAG...GAGAAGAAAAGTAAGTGAAGGAATCCTCTGATCATATTGATCACTATAGAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTAGTTTGGATCTTGCATaGGAGAATAGCTACCCTGGG +
Preference number: 4 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFSLDLA*ENSYPG
Trigger: CCCAGGGTAGCTATTCTCCCATGCAAGATCCAAACT...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp ACTGCTCACACTAGAAATACAAACATCAATGCAGGTGAACAAAGTGATGTTCAGGATTTGATTCATAAGTaGCTGGCGATTCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: TAHTRNTNINAGEQSDVQDLIHK*LAILLC
Trigger: GCACAGCAGAATCGCCAGCCACTTATGAATCAAATC...CTGAACATCACTTTGTTCACCTGCATTGATGTTTGTATTTCTAGTGTGAGCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACAAGGTCATCAGTTTCTTaGTATTGGAGTTGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTRSSVS*YWSCLK
Trigger: TTTCAGACAACTCCAATACCAAGAAACTGATGACCT...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR TCA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGTGTAGAGGATACATCTaGCTTCTGCACTTCATCTAT +
Preference number: 4 (lower is better)
Translates to: VVISAINLNTLAFSPILECRGYI*LLHFIY
Trigger: ATAGATGAAGTGCAGAAGTCAGATGTATCCTCTACA...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR TCA 90 bp TGCTTCTATAGTGATCAATATGATCAGAGGATTCCTTCACTTACTTTTCTTCTCCTGTGTCACATTCTCTaGCACAAACACAACGTTGCC +
Preference number: 4 (lower is better)
Translates to: CFYSDQYDQRIPSLTFLLLCHIL*HKHNVA
Trigger: GGCAACGTTGTGTTTGTGTCAGAGAATGTGACACAG...GAGAAGAAAAGTAAGTGAAGGAATCCTCTGATCATATTGATCACTATAGAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR TCA 90 bp TGCTTCTATAGTGATCAATATGATCAGAGGATTCCTTCACTTACTTTTCTTCTCTGCGCATGGAACTTCTaGATACACCTTCTTACCAGG +
Preference number: 4 (lower is better)
Translates to: CFYSDQYDQRIPSLTFLLCAWNF*IHLLTR
Trigger: CCTGGTAAGAAGGTGTATTCAGAAGTTCCATGCGCA...GAGAAGAAAAGTAAGTGAAGGAATCCTCTGATCATATTGATCACTATAGAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR TCA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGAACGATAGATTTGACTaGATGCCAATCCTTGTCTCA +
Preference number: 4 (lower is better)
Translates to: VVISAINLNTLAFSPILENDRFD*MPILVS
Trigger: TGAGACAAGGATTGGCATTCAGTCAAATCTATCGTT...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR TCA 90 bp CATATAAATTGGATTTTATGTACCTTACAAAACTTCGGCTTAGTCAGCACTGCTTGGCTGAGGTATCACTaGGTAGGGACTACTGTTTCT +
Preference number: 4 (lower is better)
Translates to: HINWILCTLQNFGLVSTAWLRYH*VGTTVS
Trigger: AGAAACAGTAGTCCCTACTCAGTGATACCTCAGCCA...AGCAGTGCTGACTAAGCCGAAGTTTTGTAAGGTACATAAAATCCAATTTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR TCA 90 bp TGCTTCTATAGTGATCAATATGATCAGAGGATTCCTTCACTTACTTTTCTTCTCATGGCCCTATATTCATaGCCTGAGACTGAAGCGTCT +
Preference number: 4 (lower is better)
Translates to: CFYSDQYDQRIPSLTFLLMALYS*PETEAS
Trigger: AGACGCTTCAGTCTCAGGTCATGAATATAGGGCCAT...GAGAAGAAAAGTAAGTGAAGGAATCCTCTGATCATATTGATCACTATAGAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR GCA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGGATACATCTGACTTCTaGACTTCATCTATGTTGGCA +
Preference number: 4 (lower is better)
Translates to: VVISAINLNTLAFSPILEDTSDF*TSSMLA
Trigger: TGCCAACATAGATGAAGTGCAGAAGTCAGATGTATC...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp ATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCAAAGTGATAGATTTGACTGAATaGCAATCCTTGTCTCAGTAC +
Preference number: 4 (lower is better)
Translates to: IDVHVVTVHAGVCLLPKVIDLTE*QSLSQY
Trigger: GTACTGAGACAAGGATTGGCATTCAGTCAAATCTAT...CACTTTGGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR GCA 90 bp CATATAAATTGGATTTTATGTACCTTACAAAACTTCGGCTTAGTCAGCACTGCTGCACCAGTTGGGCTTTaGAATGTGATGTCAAGTGGT +
Preference number: 4 (lower is better)
Translates to: HINWILCTLQNFGLVSTAAPVGL*NVMSSG
Trigger: ACCACTTGACATCACATTGCAAAGCCCAACTGGTGC...AGCAGTGCTGACTAAGCCGAAGTTTTGTAAGGTACATAAAATCCAATTTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR GCA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACAAAAATCTTAATCTTTTaGACTAGACTGTTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTKILIF*TRLLAR
Trigger: CCTGGCTAACAGTCTAGTGCAAAAGATTAAGATTTT...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGTTCATCAGCTCTTCTTaGTTATACCTTAGATACTGT +
Preference number: 4 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWFISSS*LYLRYC
Trigger: ACAGTATCTAAGGTATAACCAAGAAGAGCTGATGAA...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp TGCTTCTATAGTGATCAATATGATCAGAGGATTCCTTCACTTACTTTTCTTCTCCTCTGTCGAAGATGCTaGTTCAGGATTTCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: CFYSDQYDQRIPSLTFLLLCRRC*FRISLC
Trigger: ACAGAGGGAAATCCTGAACCAGCATCTTCGACAGAG...GAGAAGAAAAGTAAGTGAAGGAATCCTCTGATCATATTGATCACTATAGAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp TGCTTCTATAGTGATCAATATGATCAGAGGATTCCTTCACTTACTTTTCTTCTCATCTGTCCTGTCATCTaGTTCATGCTGCTCATGCCA +
Preference number: 4 (lower is better)
Translates to: CFYSDQYDQRIPSLTFLLICPVI*FMLLMP
Trigger: TGGCATGAGCAGCATGAACCAGATGACAGGACAGAT...GAGAAGAAAAGTAAGTGAAGGAATCCTCTGATCATATTGATCACTATAGAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGCTTACCATCTATCTTTaGGCTATATCTCTTCCTATA +
Preference number: 4 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWLTIYL*AISLPI
Trigger: TATAGGAAGAGATATAGCCCAAAGATAGATGGTAAG...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTAGGGGATATATGAACTaGTGGCCACTGAGAAGTGTT +
Preference number: 4 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFRGYMN*WPLRSV
Trigger: AACACTTCTCAGTGGCCACCAGTTCATATATCCCCT...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR TCA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTTCCAAAACAGTCTTTTaGGTCCAAGCTTCCCATCTT +
Preference number: 4 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFSKTVF*VQASHL
Trigger: AAGATGGGAAGCTTGGACTCAAAAGACTGTTTTGGA...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR TCA 90 bp CATATAAATTGGATTTTATGTACCTTACAAAACTTCGGCTTAGTCAGCACTGCTTTTAATAGTCACTTCTaGTCCAGGAGCTGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: HINWILCTLQNFGLVSTAFNSHF*SRSCAA
Trigger: AGCAGCACAGCTCCTGGATCAGAAGTGACTATTAAA...AGCAGTGCTGACTAAGCCGAAGTTTTGTAAGGTACATAAAATCCAATTTATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR TCA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGTGTGTTAAGCCCATATaGACTCCATTTTTGAACACA +
Preference number: 4 (lower is better)
Translates to: VVISAINLNTLAFSPILECVKPI*TPFLNT
Trigger: TGTGTTCAAAAATGGAGTTCATATGGGCTTAACACA...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR GCA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTACACAAACACAACGTTaGCTTCCAGGTTCACTACAA +
Preference number: 4 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFTQTQR*LPGSLQ
Trigger: TTGTAGTGAACCTGGAAGGCAACGTTGTGTTTGTGT...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTTTCTTTGATGGACTTTaGTTGAGAGACAGCGAAGCA +
Preference number: 4 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFFFDGL*LRDSEA
Trigger: TGCTTCGCTGTCTCTCAACCAAAGTCCATCAAAGAA...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp CATATAAATTGGATTTTATGTACCTTACAAAACTTCGGCTTAGTCAGCACTGCTTCCCATCTTGCTGAGTaGGGGAGGATTCATATTAAC +
Preference number: 4 (lower is better)
Translates to: HINWILCTLQNFGLVSTASHLAE*GRIHIN
Trigger: GTTAATATGAATCCTCCCCCACTCAGCAAGATGGGA...AGCAGTGCTGACTAAGCCGAAGTTTTGTAAGGTACATAAAATCCAATTTATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTTCAAGTGGTAAATTCTaGTTTGGCAATAACCTGCCC +
Preference number: 4 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFSSGKF*FGNNLP
Trigger: GGGCAGGTTATTGCCAAACCAGAATTTACCACTTGA...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTTTTTTCCATCACAGTTaGGCAACCCAATGGTTTGGT +
Preference number: 4 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFFFHHS*ATQWFG
Trigger: ACCAAACCATTGGGTTGCCCAACTGTGATGGAAAAA...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
39% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR TCA 90 bp ACTGCTCACACTAGAAATACAAACATCAATGCAGGTGAACAAAGTGATGTTCAGATTAAAAGTGCTCTGTaGAATTCGCAGTGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: TAHTRNTNINAGEQSDVQIKSAL*NSQCCF
Trigger: AAAACAGCACTGCGAATTTCACAGAGCACTTTTAAT...CTGAACATCACTTTGTTCACCTGCATTGATGTTTGTATTTCTAGTGTGAGCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR GCA 90 bp CATATAAATTGGATTTTATGTACCTTACAAAACTTCGGCTTAGTCAGCACTGCTACACAAACACAACGTTaGCTTCCAGGTTCACTACAA +
Preference number: 4 (lower is better)
Translates to: HINWILCTLQNFGLVSTATQTQR*LPGSLQ
Trigger: TTGTAGTGAACCTGGAAGGCAACGTTGTGTTTGTGT...AGCAGTGCTGACTAAGCCGAAGTTTTGTAAGGTACATAAAATCCAATTTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp ACTGCTCACACTAGAAATACAAACATCAATGCAGGTGAACAAAGTGATGTTCAGCCCCAACATGCAAGATaGTATATACACTTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: TAHTRNTNINAGEQSDVQPQHAR*YIHFCS
Trigger: TGAACAAAAGTGTATATAGCATCTTGCATGTTGGGG...CTGAACATCACTTTGTTCACCTGCATTGATGTTTGTATTTCTAGTGTGAGCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR GCA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTCAAATCAAGCAGGACTaGAAATCTTCTCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFQIKQD*KSSPSS
Trigger: AGAAGAAGGAGAAGATTTGCAGTCCTGCTTGATTTG...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp CATATAAATTGGATTTTATGTACCTTACAAAACTTCGGCTTAGTCAGCACTGCTGCTGTTCATTTTGAGTaGATAGTTACTACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: HINWILCTLQNFGLVSTAAVHFE*IVTTLR
Trigger: CCTCAGGGTAGTAACTATGCACTCAAAATGAACAGC...AGCAGTGCTGACTAAGCCGAAGTTTTGTAAGGTACATAAAATCCAATTTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp CATATAAATTGGATTTTATGTACCTTACAAAACTTCGGCTTAGTCAGCACTGCTGGGAGTTTTGCAAATTaGCCATTTTTAGGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: HINWILCTLQNFGLVSTAGSFAN*PFLGLV
Trigger: CACCAGACCTAAAAATGGGCAATTTGCAAAACTCCC...AGCAGTGCTGACTAAGCCGAAGTTTTGTAAGGTACATAAAATCCAATTTATATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTCTGTGCAAAATTTTATaGTTCTCCTTGAGCGAGGTT +
Preference number: 4 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFLCKIL*FSLSEV
Trigger: AACCTCGCTCAAGGAGAAGCATAAAATTTTGCACAG...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR GCA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTTCCTGCAAGAGTCTGTaGAAAATTTTATGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFSCKSL*KILCFS
Trigger: GGAGAAGCATAAAATTTTGCACAGACTCTTGCAGGA...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp TGCTTCTATAGTGATCAATATGATCAGAGGATTCCTTCACTTACTTTTCTTCTCTTTCCCCTACCAGAGTaGGCAAGAAAAACAACCATA +
Preference number: 4 (lower is better)
Translates to: CFYSDQYDQRIPSLTFLLFPLPE*ARKTTI
Trigger: TATGGTTGTTTTTCTTGCCCACTCTGGTAGGGGAAA...GAGAAGAAAAGTAAGTGAAGGAATCCTCTGATCATATTGATCACTATAGAAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR GCA 90 bp TGCTTCTATAGTGATCAATATGATCAGAGGATTCCTTCACTTACTTTTCTTCTCGATACATCTGACTTCTaGACTTCATCTATGTTGGCA +
Preference number: 4 (lower is better)
Translates to: CFYSDQYDQRIPSLTFLLDTSDF*TSSMLA
Trigger: TGCCAACATAGATGAAGTGCAGAAGTCAGATGTATC...GAGAAGAAAAGTAAGTGAAGGAATCCTCTGATCATATTGATCACTATAGAAGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp TGCTTCTATAGTGATCAATATGATCAGAGGATTCCTTCACTTACTTTTCTTCTCCATGGTGTGAAAGTTTaGATCTTGCATGGGAGAATA +
Preference number: 4 (lower is better)
Translates to: CFYSDQYDQRIPSLTFLLHGVKV*ILHGRI
Trigger: TATTCTCCCATGCAAGATCCAAACTTTCACACCATG...GAGAAGAAAAGTAAGTGAAGGAATCCTCTGATCATATTGATCACTATAGAAGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR TCA 90 bp CATATAAATTGGATTTTATGTACCTTACAAAACTTCGGCTTAGTCAGCACTGCTCTTTCTCTTGTTCTTTaGTCTGACGAATTTGCTTCA +
Preference number: 4 (lower is better)
Translates to: HINWILCTLQNFGLVSTALSLVL*SDEFAS
Trigger: TGAAGCAAATTCGTCAGATCAAAGAACAAGAGAAAG...AGCAGTGCTGACTAAGCCGAAGTTTTGTAAGGTACATAAAATCCAATTTATATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR TCA 90 bp TGCTTCTATAGTGATCAATATGATCAGAGGATTCCTTCACTTACTTTTCTTCTCAAAAGCTGTGGTAATTaGCTATTCTGCAAATCATCC +
Preference number: 4 (lower is better)
Translates to: CFYSDQYDQRIPSLTFLLKSCGN*LFCKSS
Trigger: GGATGATTTGCAGAATAGTCAATTACCACAGCTTTT...GAGAAGAAAAGTAAGTGAAGGAATCCTCTGATCATATTGATCACTATAGAAGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR TCA 90 bp TGCTTCTATAGTGATCAATATGATCAGAGGATTCCTTCACTTACTTTTCTTCTCAATCTGACATGGGTATaGAATTTGCCTGTCAACATT +
Preference number: 4 (lower is better)
Translates to: CFYSDQYDQRIPSLTFLLNLTWV*NLPVNI
Trigger: AATGTTGACAGGCAAATTTCATACCCATGTCAGATT...GAGAAGAAAAGTAAGTGAAGGAATCCTCTGATCATATTGATCACTATAGAAGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR TCA 90 bp TGCTTCTATAGTGATCAATATGATCAGAGGATTCCTTCACTTACTTTTCTTCTCGATAATGAAGGGAACTaGTTTGGCTTTTGCTTCTAT +
Preference number: 4 (lower is better)
Translates to: CFYSDQYDQRIPSLTFLLDNEGN*FGFCFY
Trigger: ATAGAAGCAAAAGCCAAATCAGTTCCCTTCATTATC...GAGAAGAAAAGTAAGTGAAGGAATCCTCTGATCATATTGATCACTATAGAAGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR GCA 90 bp CATATAAATTGGATTTTATGTACCTTACAAAACTTCGGCTTAGTCAGCACTGCTCCCCAACATGCAAGATaGTATATACACTTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: HINWILCTLQNFGLVSTAPQHAR*YIHFCS
Trigger: TGAACAAAAGTGTATATAGCATCTTGCATGTTGGGG...AGCAGTGCTGACTAAGCCGAAGTTTTGTAAGGTACATAAAATCCAATTTATATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp TGCTTCTATAGTGATCAATATGATCAGAGGATTCCTTCACTTACTTTTCTTCTCAGACTCTTTCCAACATaGTCTTTAGAGCTTTCTAGA +
Preference number: 4 (lower is better)
Translates to: CFYSDQYDQRIPSLTFLLRLFPT*SLELSR
Trigger: TCTAGAAAGCTCTAAAGACCATGTTGGAAAGAGTCT...GAGAAGAAAAGTAAGTGAAGGAATCCTCTGATCATATTGATCACTATAGAAGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CCA 90 bp CATATAAATTGGATTTTATGTACCTTACAAAACTTCGGCTTAGTCAGCACTGCTATAAAAATCAAGAATTaGTTCCTACAGCGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: HINWILCTLQNFGLVSTAIKIKN*FLQRLH
Trigger: ATGCAGCCGCTGTAGGAACCAATTCTTGATTTTTAT...AGCAGTGCTGACTAAGCCGAAGTTTTGTAAGGTACATAAAATCCAATTTATATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CCA 90 bp TGCTTCTATAGTGATCAATATGATCAGAGGATTCCTTCACTTACTTTTCTTCTCTTAATTTTGTGTTACTaGCAGGATCTGTCTTACTGT +
Preference number: 4 (lower is better)
Translates to: CFYSDQYDQRIPSLTFLLLILCY*QDLSYC
Trigger: ACAGTAAGACAGATCCTGCCAGTAACACAAAATTAA...GAGAAGAAAAGTAAGTGAAGGAATCCTCTGATCATATTGATCACTATAGAAGCA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS GCA 90 bp AGCCAAATCCAAGAGAAATCGGCTCGGGTCGGTCACGCCGTCAGGTaGCGGCTGCCGTCGGCGCTGACCTTCGCCGCCGAAGCTGTAGCC +
Preference number: 5 (lower is better)
Translates to: SQIQEKSARVGHAVR*RLPSALTFAAEAVA
Trigger: GGCTACAGCTTCGGCGGCGAAGGTCAGCGCCGACGGCAGCCGGCACCTGACGGCGTGACCGACCCGAGCCGATTTCTCTTGGATTTGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS CCA 90 bp CGCACCGAGATTCGGGTCGGTGGGAGGGGAAGGCGTCGGAGGAGGTaGAGAGGGAGTGGGATTAGAGGACGAGGTGGCGGAGGAAGGTGT +
Preference number: 5 (lower is better)
Translates to: RTEIRVGGRGRRRRR*RGSGIRGRGGGGRC
Trigger: ACACCTTCCTCCGCCACCTCGTCCTCTAATCCCACTCCCTCTCCACCTCCTCCGACGCCTTCCCCTCCCACCGACCCGAATCTCGGTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520416.1
CDS TCA 90 bp GGTGTTCAGGCTCGGTCTCTGGTTTGGGAAAGTTTCCCCTACCAGTaGCGGACCCAGAACGCGGGAGGCCCAGTCCAGCTCCGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: GVQARSLVWESFPYQ*RTQNAGGPVQLRAS
Trigger: GCTGGCCCGGAGCTGGACTGGGCCTCCCGCGTTCTGGGTCCGTCACTGGTAGGGGAAACTTTCCCAAACCAGAGACCGAGCCTGAACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520416.1
CDS-3UTR CAA 90 bp GAGGCAGCTCCTCCTGCCACAGCCGAGTGGACGCCACCCTGGGAACCAGGGCCAGCGATTCTGCTGTGCTaGGAGGCGATGCTGAAGTTG +
Preference number: 5 (lower is better)
Translates to: EAAPPATAEWTPPWEPGPAILLC*EAMLKL
Trigger: CAACTTCAGCATCGCCTCCAAGCACAGCAGAATCGC...TGGCCCTGGTTCCCAGGGTGGCGTCCACTCGGCTGTGGCAGGAGGAGCTGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS GCA 90 bp AAATCGACACCCGGCAGGTCAGCTCCCTGCCTTCGATTGGCTCACTaGCCCATCAGTCAGACGCACCGAGATTCGGGTCGGTGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: KSTPGRSAPCLRLAH*PISQTHRDSGRWEG
Trigger: CCCCTCCCACCGACCCGAATCTCGGTGCGTCTGACTGATGGGGCAGTGAGCCAATCGAAGGCAGGGAGCTGACCTGCCGGGTGTCGATTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520416.1
CDS-3UTR CAA 90 bp GAGGCAGCTCCTCCTGCCACAGCCGAGTGGACGCCACCCTGGGAACCAGGGCCAGCATTCTCTTTCTTCTaGGGGCTCACCGGCTCTTGT +
Preference number: 5 (lower is better)
Translates to: EAAPPATAEWTPPWEPGPAFSFF*GLTGSC
Trigger: ACAAGAGCCGGTGAGCCCCAAGAAGAAAGAGAATGC...TGGCCCTGGTTCCCAGGGTGGCGTCCACTCGGCTGTGGCAGGAGGAGCTGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp GAGGCAGCTCCTCCTGCCACAGCCGAGTGGACGCCACCCTGGGAACCAGGGCCATATGAAGCCACTGGGTaGCTTCTCCTTGGGCACTCA +
Preference number: 5 (lower is better)
Translates to: EAAPPATAEWTPPWEPGPYEATG*LLLGHS
Trigger: TGAGTGCCCAAGGAGAAGCAACCCAGTGGCTTCATA...TGGCCCTGGTTCCCAGGGTGGCGTCCACTCGGCTGTGGCAGGAGGAGCTGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp GAGGACAGCCCTGACGTAGGCACGGAGGTCACTGAGGTCATGCTGATCTGTCCTGGCCCCAGCGCATCCTaGTCGATGACACCCTGCCCT +
Preference number: 5 (lower is better)
Translates to: EDSPDVGTEVTEVMLICPGPSAS*SMTPCP
Trigger: AGGGCAGGGTGTCATCGACAAGGATGCGCTGGGGCC...AGGACAGATCAGCATGACCTCAGTGACCTCCGTGCCTACGTCAGGGCTGTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS TCA 90 bp GATTCGAGGGCTGCCAGCCACTCCAGGGCTCATGCGATGCCTTGGTaGAAGCATGGAGGTGGGCTGTCCTGGATTCATGCCAGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: DSRAASHSRAHAMPW*KHGGGLSWIHARAA
Trigger: AGCAGCCCTGGCATGAATCCAGGACAGCCCACCTCCATGCTTTCACCAAGGCATCGCATGAGCCCTGGAGTGGCTGGCAGCCCTCGAATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS GCA 90 bp CTGGGTGGGATTCGAGGGCTGCCAGCCACTCCAGGGCTCATGCGATaGCTTGGTGAAAGCATGGAGGTGGGCTGTCCTGGATTCATGCCA +
Preference number: 5 (lower is better)
Translates to: LGGIRGLPATPGLMR*LGESMEVGCPGFMP
Trigger: TGGCATGAATCCAGGACAGCCCACCTCCATGCTTTCACCAAGGCATCGCATGAGCCCTGGAGTGGCTGGCAGCCCTCGAATCCCACCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp GAGGCAGCTCCTCCTGCCACAGCCGAGTGGACGCCACCCTGGGAACCAGGGCCACTGTGGAGTCTTTGTTaGTATCCGACAAAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: EAAPPATAEWTPPWEPGPLWSLC*YPTKSW
Trigger: CCAGCTCTTTGTCGGATACAAACAAAGACTCCACAG...TGGCCCTGGTTCCCAGGGTGGCGTCCACTCGGCTGTGGCAGGAGGAGCTGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS GCA 90 bp ACTGACTGGGTGGGATTCGAGGGCTGCCAGCCACTCCAGGGCTCATaGGATGCCTTGGTGAAAGCATGGAGGTGGGCTGTCCTGGATTCA +
Preference number: 5 (lower is better)
Translates to: TDWVGFEGCQPLQGS*DALVKAWRWAVLDS
Trigger: TGAATCCAGGACAGCCCACCTCCATGCTTTCACCAAGGCATCGCATGAGCCCTGGAGTGGCTGGCAGCCCTCGAATCCCACCCAGTCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS GCA 90 bp GCAAGCTTCCTGCAGGGGAAAACTGACTGGGTGGGATTCGAGGGCTaGCAGCCACTCCAGGGCTCATGCGATGCCTTGGTGAAAGCATGG +
Preference number: 5 (lower is better)
Translates to: ASFLQGKTDWVGFEG*QPLQGSCDALVKAW
Trigger: CCATGCTTTCACCAAGGCATCGCATGAGCCCTGGAGTGGCTGGCAGCCCTCGAATCCCACCCAGTCAGTTTTCCCCTGCAGGAAGCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS CCA 90 bp CAGCCACTCCAGGGCTCATGCGATGCCTTGGTGAAAGCATGGAGGTaGGCTGTCCTGGATTCATGCCAGGGCTGCTTTGTGAGGGGCTGT +
Preference number: 5 (lower is better)
Translates to: QPLQGSCDALVKAWR*AVLDSCQGCFVRGC
Trigger: ACAGCCCCTCACAAAGCAGCCCTGGCATGAATCCAGGACAGCCCACCTCCATGCTTTCACCAAGGCATCGCATGAGCCCTGGAGTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS CCA 90 bp TGCTCTGCCCGTCAGCTCTCTCACTGCTCACGGCCGGGGGCAGGTTaGGGTCATTTGTTTCCTTTTGCTCTCCAGGATGGCAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: CSARQLSHCSRPGAG*GHLFPFALQDGSCS
Trigger: AGAGCAGCTGCCATCCTGGAGAGCAAAAGGAAACAAATGACCCCAACCTGCCCCCGGCCGTGAGCAGTGAGAGAGCTGACGGGCAGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000524223.1
CDS CCA 90 bp GGCCTCATGGGGATGCTGGCTGCTGGGTTCCGAATCATACCTCCTTaGACTGGCCGGTTCATGGCACTGGTGGTAGCAGCACAGGTGACT +
Preference number: 5 (lower is better)
Translates to: GLMGMLAAGFRIIPP*TGRFMALVVAAQVT
Trigger: AGTCACCTGTGCTGCTACCACCAGTGCCATGAACCGGCCAGTCCAAGGAGGTATGATTCGGAACCCAGCAGCCAGCATCCCCATGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000518363.2
CDS CCA 90 bp GAGACTGAAGCGTCTGTCTTTGGCCAGGCTGGCTGCTGGGCCTCATaGGGATGCTGGCTGCTGGGTTCCGAATCATACCTCCTTGGACTG +
Preference number: 5 (lower is better)
Translates to: ETEASVFGQAGCWAS*GCWLLGSESYLLGL
Trigger: CAGTCCAAGGAGGTATGATTCGGAACCCAGCAGCCAGCATCCCCATGAGGCCCAGCAGCCAGCCTGGCCAAAGACAGACGCTTCAGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000518363.2
CDS CCA 90 bp TCCAAGAGAAATCGACACCCGGCAGGTCAGCTCCCTGCCTTCGATTaGCTCACTGCCCCATCAGTCAGACGCACCGAGATTCGGGTCGGT +
Preference number: 5 (lower is better)
Translates to: SKRNRHPAGQLPAFD*LTAPSVRRTEIRVG
Trigger: ACCGACCCGAATCTCGGTGCGTCTGACTGATGGGGCAGTGAGCCAATCGAAGGCAGGGAGCTGACCTGCCGGGTGTCGATTTCTCTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520416.1
CDS-3UTR CAA 90 bp GAGGCAGCTCCTCCTGCCACAGCCGAGTGGACGCCACCCTGGGAACCAGGGCCAGGAAACATTGCTGATTaGATTCATAAGTGGCTGGCG +
Preference number: 5 (lower is better)
Translates to: EAAPPATAEWTPPWEPGPGNIAD*IHKWLA
Trigger: CGCCAGCCACTTATGAATCAAATCAGCAATGTTTCC...TGGCCCTGGTTCCCAGGGTGGCGTCCACTCGGCTGTGGCAGGAGGAGCTGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS CCA 90 bp CATGGGGATGCTGGCTGCTGGGTTCCGAATCATACCTCCTTGGACTaGCCGGTTCATGGCACTGGTGGTAGCAGCACAGGTGACTCTCAC +
Preference number: 5 (lower is better)
Translates to: HGDAGCWVPNHTSLD*PVHGTGGSSTGDSH
Trigger: GTGAGAGTCACCTGTGCTGCTACCACCAGTGCCATGAACCGGCCAGTCCAAGGAGGTATGATTCGGAACCCAGCAGCCAGCATCCCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000518363.2
CDS GCA 90 bp ATGGCACTGGTGGTAGCAGCACAGGTGACTCTCACAGCCGAACTCTaGGGTGCCCATTCTCCAGATGGCATAGTAGGCCGAGAAGCACTG +
Preference number: 5 (lower is better)
Translates to: MALVVAAQVTLTAEL*GAHSPDGIVGREAL
Trigger: CAGTGCTTCTCGGCCTACTATGCCATCTGGAGAATGGGCACCGCAGAGTTCGGCTGTGAGAGTCACCTGTGCTGCTACCACCAGTGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000518363.2
CDS-3UTR CAA 90 bp GAGGCAGCTCCTCCTGCCACAGCCGAGTGGACGCCACCCTGGGAACCAGGGCCATGTCATATTCAACCCTaGTCCTCTCATCATCAAAGT +
Preference number: 5 (lower is better)
Translates to: EAAPPATAEWTPPWEPGPCHIQP*SSHHQS
Trigger: ACTTTGATGATGAGAGGACAAGGGTTGAATATGACA...TGGCCCTGGTTCCCAGGGTGGCGTCCACTCGGCTGTGGCAGGAGGAGCTGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS GCA 90 bp ACTGGTGGTAGCAGCACAGGTGACTCTCACAGCCGAACTCTGCGGTaGCCATTCTCCAGATGGCATAGTAGGCCGAGAAGCACTGTTACC +
Preference number: 5 (lower is better)
Translates to: TGGSSTGDSHSRTLR*PFSRWHSRPRSTVT
Trigger: GGTAACAGTGCTTCTCGGCCTACTATGCCATCTGGAGAATGGGCACCGCAGAGTTCGGCTGTGAGAGTCACCTGTGCTGCTACCACCAGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000518363.2
CDS GCA 90 bp TGTAGCCAAATCCAAGAGAAATCGACACCCGGCAGGTCAGCTCCCTaGCTTCGATTGGCTCACTGCCCCATCAGTCAGACGCACCGAGAT +
Preference number: 5 (lower is better)
Translates to: CSQIQEKSTPGRSAP*LRLAHCPISQTHRD
Trigger: ATCTCGGTGCGTCTGACTGATGGGGCAGTGAGCCAATCGAAGGCAGGGAGCTGACCTGCCGGGTGTCGATTTCTCTTGGATTTGGCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520416.1
CDS-3UTR CAA 90 bp GAGGACAGCCCTGACGTAGGCACGGAGGTCACTGAGGTCATGCTGATCTGTCCTAGACGTGATCTTGCCTaGGAGATCCTGGCGAGTAGT +
Preference number: 5 (lower is better)
Translates to: EDSPDVGTEVTEVMLICPRRDLA*EILASS
Trigger: ACTACTCGCCAGGATCTCCAAGGCAAGATCACGTCT...AGGACAGATCAGCATGACCTCAGTGACCTCCGTGCCTACGTCAGGGCTGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp GAGGACAGCCCTGACGTAGGCACGGAGGTCACTGAGGTCATGCTGATCTGTCCTTACCCTGAGGAGTGGTaGCTTGCATGCCTGACACAT +
Preference number: 5 (lower is better)
Translates to: EDSPDVGTEVTEVMLICPYPEEW*LACLTH
Trigger: ATGTGTCAGGCATGCAAGCAACCACTCCTCAGGGTA...AGGACAGATCAGCATGACCTCAGTGACCTCCGTGCCTACGTCAGGGCTGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp GAGGACAGCCCTGACGTAGGCACGGAGGTCACTGAGGTCATGCTGATCTGTCCTATGGGGCAGTCTGATTaGGAGGAGCTTGTTGTTGGC +
Preference number: 5 (lower is better)
Translates to: EDSPDVGTEVTEVMLICPMGQSD*EELVVG
Trigger: GCCAACAACAAGCTCCTCCAAATCAGACTGCCCCAT...AGGACAGATCAGCATGACCTCAGTGACCTCCGTGCCTACGTCAGGGCTGTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS TCA 90 bp CAGATTCATCTGGGAGCCATGCAAAGAGCTGTGAGAGAGGAGCTGTaGCCCAACACTGGGGGACACTGGGGAGAAAGGACTGGTGAAAGG +
Preference number: 5 (lower is better)
Translates to: QIHLGAMQRAVREEL*PNTGGHWGERTGER
Trigger: CCTTTCACCAGTCCTTTCTCCCCAGTGTCCCCCAGTGTTGGGTCACAGCTCCTCTCTCACAGCTCTTTGCATGGCTCCCAGATGAATCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521239.1
CDS CCA 90 bp TGGACTCCTGGCTCAGGTCTTTGCCTGTGGCTTCTGCTGTTAACTTaGCCAAGTCCACAGGGGAACTGCTGTCCTGCAAGAGTCTGTGCA +
Preference number: 5 (lower is better)
Translates to: WTPGSGLCLWLLLLT*PSPQGNCCPARVCA
Trigger: TGCACAGACTCTTGCAGGACAGCAGTTCCCCTGTGGACTTGGCCAAGTTAACAGCAGAAGCCACAGGCAAAGACCTGAGCCAGGAGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000524223.1
CDS-3UTR CAA 90 bp GCGCCCATCCATTTATGTCGGAGGGGGCCTGATAGGCTGGGTTGGCCTGAGACTCCCATCCCACTCATCTaGAACACATATCAGCAACTG +
Preference number: 5 (lower is better)
Translates to: APIHLCRRGPDRLGWPETPIPLI*NTYQQL
Trigger: CAGTTGCTGATATGTGTTCAAGATGAGTGGGATGGG...AGTCTCAGGCCAACCCAGCCTATCAGGCCCCCTCCGACATAAATGGATGGGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp TCTCCTCCAGGCCATCAAAATTCCGCAAGGCCAGATACAGCTGGTCCAGGAGAGTGGAGGAGCTTGTTGTaGGCTATACTGAGGTCCCCC +
Preference number: 5 (lower is better)
Translates to: SPPGHQNSARPDTAGPGEWRSLL*AILRSP
Trigger: GGGGGACCTCAGTATAGCCAACAACAAGCTCCTCCA...CTCTCCTGGACCAGCTGTATCTGGCCTTGCGGAATTTTGATGGCCTGGAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp TCTCCTCCAGGCCATCAAAATTCCGCAAGGCCAGATACAGCTGGTCCAGGAGAGGCGATTCTGCTGTGCTaGGAGGCGATGCTGAAGTTG +
Preference number: 5 (lower is better)
Translates to: SPPGHQNSARPDTAGPGEAILLC*EAMLKL
Trigger: CAACTTCAGCATCGCCTCCAAGCACAGCAGAATCGC...CTCTCCTGGACCAGCTGTATCTGGCCTTGCGGAATTTTGATGGCCTGGAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS TCA 90 bp ATTCCCTGGTTAGCCAGATTCATCTGGGAGCCATGCAAAGAGCTGTaGGAGAGGAGCTGTGACCCAACACTGGGGGACACTGGGGAGAAA +
Preference number: 5 (lower is better)
Translates to: IPWLARFIWEPCKEL*ERSCDPTLGDTGEK
Trigger: TTTCTCCCCAGTGTCCCCCAGTGTTGGGTCACAGCTCCTCTCTCACAGCTCTTTGCATGGCTCCCAGATGAATCTGGCTAACCAGGGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521239.1
CDS-3UTR CAA 90 bp ATCCGAGGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTTCCAAGCTTCCCATCTaGCTGAGTGGGGGAGGATTC +
Preference number: 5 (lower is better)
Translates to: IRGLLIVAGIPLGATMLGSKLPI*LSGGGF
Trigger: GAATCCTCCCCCACTCAGCAAGATGGGAAGCTTGGA...ACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCCTCGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp TCTCCTCCAGGCCATCAAAATTCCGCAAGGCCAGATACAGCTGGTCCAGGAGAGGCAGCTGCTCTCTGCTaGTCCAGTTGTACCTTCAGA +
Preference number: 5 (lower is better)
Translates to: SPPGHQNSARPDTAGPGEAAALC*SSCTFR
Trigger: TCTGAAGGTACAACTGGACAAGCAGAGAGCAGCTGC...CTCTCCTGGACCAGCTGTATCTGGCCTTGCGGAATTTTGATGGCCTGGAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp CGTGATATGAAGCCACTGGGTTGCTTCTCCTTGGGCACTCACCTGCTCGGGACCCTGTGGAGTCTTTGTTaGTATCCGACAAAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: RDMKPLGCFSLGTHLLGTLWSLC*YPTKSW
Trigger: CCAGCTCTTTGTCGGATACAAACAAAGACTCCACAG...GGTCCCGAGCAGGTGAGTGCCCAAGGAGAAGCAACCCAGTGGCTTCATATCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp TCTCCTCCAGGCCATCAAAATTCCGCAAGGCCAGATACAGCTGGTCCAGGAGAGGCTTCTGCTGTTAACTaGGCCAAGTCCACAGGGGAA +
Preference number: 5 (lower is better)
Translates to: SPPGHQNSARPDTAGPGEASAVN*AKSTGE
Trigger: TTCCCCTGTGGACTTGGCCAAGTTAACAGCAGAAGC...CTCTCCTGGACCAGCTGTATCTGGCCTTGCGGAATTTTGATGGCCTGGAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp TCTCCTCCAGGCCATCAAAATTCCGCAAGGCCAGATACAGCTGGTCCAGGAGAGTTCTGGATCTACTGCTaGGCTCTGGCTGACCAGTTC +
Preference number: 5 (lower is better)
Translates to: SPPGHQNSARPDTAGPGEFWIYC*ALADQF
Trigger: GAACTGGTCAGCCAGAGCCAAGCAGTAGATCCAGAA...CTCTCCTGGACCAGCTGTATCTGGCCTTGCGGAATTTTGATGGCCTGGAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp TGCATTTGCCTGGGGAATCCGAGGGTTGCTCATAGTTGCTGGCATACCACTAGGCATGCTGGTGTTTGCTaGCTGCCCAAAGTGTGGTGG +
Preference number: 5 (lower is better)
Translates to: CICLGNPRVAHSCWHTTRHAGVC*LPKVWW
Trigger: CCACCACACTTTGGGCAGCAAGCAAACACCAGCATG...CCTAGTGGTATGCCAGCAACTATGAGCAACCCTCGGATTCCCCAGGCAAATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp GCGCCCATCCATTTATGTCGGAGGGGGCCTGATAGGCTGGGTTGGCCTGAGACTGTCGCCATGGACACATaGATGTTCATGTTGTTACTG +
Preference number: 5 (lower is better)
Translates to: APIHLCRRGPDRLGWPETVAMDT*MFMLLL
Trigger: CAGTAACAACATGAACATCAATGTGTCCATGGCGAC...AGTCTCAGGCCAACCCAGCCTATCAGGCCCCCTCCGACATAAATGGATGGGCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS TCA 90 bp TTGTTTGTATCCGACAAAGAGCTGGCTAAGGGCGAGGGCTCCATCTaGTCAGATTTGGTGGTCAGCAGCTGCAGGAGTTTGGTCTGCCCT +
Preference number: 5 (lower is better)
Translates to: LFVSDKELAKGEGSI*SDLVVSSCRSLVCP
Trigger: AGGGCAGACCAAACTCCTGCAGCTGCTGACCACCAAATCTGATCAGATGGAGCCCTCGCCCTTAGCCAGCTCTTTGTCGGATACAAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000524223.1
CDS TCA 90 bp CTCTTTCTTCTTGGGGCTCACCGGCTCTTGTTTAATAGTCACTTCTaGTCCAGGAGCTGTGCTGCTGGACTCCTGGCTCAGGTCTTTGCC +
Preference number: 5 (lower is better)
Translates to: LFLLGAHRLLFNSHF*SRSCAAGLLAQVFA
Trigger: GGCAAAGACCTGAGCCAGGAGTCCAGCAGCACAGCTCCTGGATCAGAAGTGACTATTAAACAAGAGCCGGTGAGCCCCAAGAAGAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000524223.1
CDS GCA 90 bp GCTGGGTCCAAGTTGGTCAGGACATTCCTTGCGCTTTCTTGTCTCTaGCCTGGAGGGGTCAGAGGTATTTTCTCCCATCCCACTCATCTT +
Preference number: 5 (lower is better)
Translates to: AGSKLVRTFLALSCL*PGGVRGIFSHPTHL
Trigger: AAGATGAGTGGGATGGGAGAAAATACCTCTGACCCCTCCAGGGCAGAGACAAGAAAGCGCAAGGAATGTCCTGACCAACTTGGACCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS GCA 90 bp CTGAATACACCTTCTTACCAGGTCCTCCCAGCCTGGTTTCATGGCTaGTCTCATGGTGCTGGTATCCAGAGACGTGATCTTGCCTTGGAG +
Preference number: 5 (lower is better)
Translates to: LNTPSYQVLPAWFHG*SHGAGIQRRDLALE
Trigger: CTCCAAGGCAAGATCACGTCTCTGGATACCAGCACCATGAGAGCAGCCATGAAACCAGGCTGGGAGGACCTGGTAAGAAGGTGTATTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS CCA 90 bp GCACAGGGCCTGATGGGCAGGGCTGTTAGAGCTAATTGGATTCAGTaGCTTCCCCATCGTTTGTCCAGTCAGATCCGGATTCATCACACA +
Preference number: 5 (lower is better)
Translates to: AQGLMGRAVRANWIQ*LPHRLSSQIRIHHT
Trigger: TGTGTGATGAATCCGGATCTGACTGGACAAACGATGGGGAAGCCACTGAATCCAATTAGCTCTAACAGCCCTGCCCATCAGGCCCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS CCA 90 bp ACAGGTGACTCTCACAGCCGAACTCTGCGGTGCCCATTCTCCAGATaGCATAGTAGGCCGAGAAGCACTGTTACCAATCATTCCTGTGCT +
Preference number: 5 (lower is better)
Translates to: TGDSHSRTLRCPFSR*HSRPRSTVTNHSCA
Trigger: AGCACAGGAATGATTGGTAACAGTGCTTCTCGGCCTACTATGCCATCTGGAGAATGGGCACCGCAGAGTTCGGCTGTGAGAGTCACCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS CCA 90 bp ACAGGTGACTCTCACAGCCGAACTCTGCGGTGCCCATTCTCCAGATaGCATAGTAGGCCGAGAAGCACTGTTACCAATCATTCTGCTCTG +
Preference number: 5 (lower is better)
Translates to: TGDSHSRTLRCPFSR*HSRPRSTVTNHSAL
Trigger: CAGAGCAGAATGATTGGTAACAGTGCTTCTCGGCCTACTATGCCATCTGGAGAATGGGCACCGCAGAGTTCGGCTGTGAGAGTCACCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518287.6
ENST00000518363.2
CDS-3UTR CAA 90 bp TCTCCTCCAGGCCATCAAAATTCCGCAAGGCCAGATACAGCTGGTCCAGGAGAGTTTTCAGTGTTCCTTTaGGGGCTGGGTCCAAGTTGG +
Preference number: 5 (lower is better)
Translates to: SPPGHQNSARPDTAGPGEFSVFL*GLGPSW
Trigger: CCAACTTGGACCCAGCCCCAAAAGGAACACTGAAAA...CTCTCCTGGACCAGCTGTATCTGGCCTTGCGGAATTTTGATGGCCTGGAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp GCGCCCATCCATTTATGTCGGAGGGGGCCTGATAGGCTGGGTTGGCCTGAGACTACTGAATGCCAATCCTaGTCTCAGTACTTCATGATG +
Preference number: 5 (lower is better)
Translates to: APIHLCRRGPDRLGWPETTECQS*SQYFMM
Trigger: CATCATGAAGTACTGAGACAAGGATTGGCATTCAGT...AGTCTCAGGCCAACCCAGCCTATCAGGCCCCCTCCGACATAAATGGATGGGCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp GGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTGTCATAAGCAGCTGCAGGAGTTaGGTCTGCCCTTTGCTGTCA +
Preference number: 5 (lower is better)
Translates to: GLLIVAGIPLGATMLGVISSCRS*VCPLLS
Trigger: TGACAGCAAAGGGCAGACCAAACTCCTGCAGCTGCT...TATGACACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp ATCCGAGGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTAAATGGCTGCCTGTTTaGGCTGGCAAAAGACGCCTG +
Preference number: 5 (lower is better)
Translates to: IRGLLIVAGIPLGATMLGKWLPV*AGKRRL
Trigger: CAGGCGTCTTTTGCCAGCCAAAACAGGCAGCCATTT...ACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCCTCGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp GGACACATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCCTGGGTTGCTTCTCCTaGGGCACTCACCTGCTCGGG +
Preference number: 5 (lower is better)
Translates to: GHIDVHVVTVHAGVCLLPLGCFS*GTHLLG
Trigger: CCCGAGCAGGTGAGTGCCCAAGGAGAAGCAACCCAG...GGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAATGTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS TCA 90 bp GTCCTGGATTCATGCCAGGGCTGCTTTGTGAGGGGCTGTTCATTTTaGGTGCATAGTTACTACCCTGAGGAGTGGTTGCTTGCATGCCTG +
Preference number: 5 (lower is better)
Translates to: VLDSCQGCFVRGCSF*VHSYYPEEWLLACL
Trigger: CAGGCATGCAAGCAACCACTCCTCAGGGTAGTAACTATGCACTCAAAATGAACAGCCCCTCACAAAGCAGCCCTGGCATGAATCCAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS TCA 90 bp AAGCATGGAGGTGGGCTGTCCTGGATTCATGCCAGGGCTGCTTTGTaGGGGGCTGTTCATTTTGAGTGCATAGTTACTACCCTGAGGAGT +
Preference number: 5 (lower is better)
Translates to: KHGGGLSWIHARAAL*GAVHFECIVTTLRS
Trigger: ACTCCTCAGGGTAGTAACTATGCACTCAAAATGAACAGCCCCTCACAAAGCAGCCCTGGCATGAATCCAGGACAGCCCACCTCCATGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS GCA 90 bp GCCTCAAGCATCATAGGCCCCAGCGCATCCTTGTCGATGACACCCTaGCCTGTAGAGGATACATCTGACTTCTGCACTTCATCTATGTTG +
Preference number: 5 (lower is better)
Translates to: ASSIIGPSASLSMTP*PVEDTSDFCTSSML
Trigger: CAACATAGATGAAGTGCAGAAGTCAGATGTATCCTCTACAGGGCAGGGTGTCATCGACAAGGATGCGCTGGGGCCTATGATGCTTGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS GCA 90 bp CTTGCATGCCTGACACATGGTTCATTCCCCCAGAACCACCAAACCTaGCCATGGGCATGCCCATTTGTTCCTTTGGGCCATTTATGGGAA +
Preference number: 5 (lower is better)
Translates to: LACLTHGSFPQNHQT*PWACPFVPLGHLWE
Trigger: TTCCCATAAATGGCCCAAAGGAACAAATGGGCATGCCCATGGGCAGGTTTGGTGGTTCTGGGGGAATGAACCATGTGTCAGGCATGCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS CCA 90 bp CGCATGGAACTTCTGAATACACCTTCTTACCAGGTCCTCCCAGCCTaGTTTCATGGCTGCTCTCATGGTGCTGGTATCCAGAGACGTGAT +
Preference number: 5 (lower is better)
Translates to: RMELLNTPSYQVLPA*FHGCSHGAGIQRRD
Trigger: ATCACGTCTCTGGATACCAGCACCATGAGAGCAGCCATGAAACCAGGCTGGGAGGACCTGGTAAGAAGGTGTATTCAGAAGTTCCATGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS CCA 90 bp CAGGCAAGCTACCTGTGGAGTCTTTGTTTGTATCCGACAAAGAGCTaGCTAAGGGCGAGGGCTCCATCTGATCAGATTTGGTGGTCAGCA +
Preference number: 5 (lower is better)
Translates to: QASYLWSLCLYPTKS*LRARAPSDQIWWSA
Trigger: TGCTGACCACCAAATCTGATCAGATGGAGCCCTCGCCCTTAGCCAGCTCTTTGTCGGATACAAACAAAGACTCCACAGGTAGCTTGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000524223.1
CDS CCA 90 bp TGTGTCTCCCTCCTGCTTAATCATATCCATTCCAGGCAGCTGGTTTaGGAACAGGTTGCCTCCCCTCAGAGCAGGATCATTAACCTGCTC +
Preference number: 5 (lower is better)
Translates to: CVSLLLNHIHSRQLV*EQVASPQSRIINLL
Trigger: GAGCAGGTTAATGATCCTGCTCTGAGGGGAGGCAACCTGTTCCCAAACCAGCTGCCTGGAATGGATATGATTAAGCAGGAGGGAGACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518363.2
CDS CCA 90 bp CGTGTTGTGTCTCCCTCCTGCTTAATCATATCCATTCCAGGCAGCTaGTTTGGGAACAGGTTGCCTCCCCTCAGAGCAGGATCATTAACC +
Preference number: 5 (lower is better)
Translates to: RVVSPSCLIISIPGS*FGNRLPPLRAGSLT
Trigger: GGTTAATGATCCTGCTCTGAGGGGAGGCAACCTGTTCCCAAACCAGCTGCCTGGAATGGATATGATTAAGCAGGAGGGAGACACAACACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518363.2
CDS CCA 90 bp AGGACTGGTGAAAGGTGGTGGGGATCTAAGTCCAGTACCGTAGTTTaGAGGAAATGGAAACTGCTGTGCATTTGCCTGGGGAATCCGAGG +
Preference number: 5 (lower is better)
Translates to: RTGERWWGSKSSTVV*RKWKLLCICLGNPR
Trigger: CCTCGGATTCCCCAGGCAAATGCACAGCAGTTTCCATTTCCTCCAAACTACGGTACTGGACTTAGATCCCCACCACCTTTCACCAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521239.1
CDS-3UTR CAA 90 bp GGACACATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCGGGGCTGGGTCCAAGTaGGTCAGGACATTCCTTGCG +
Preference number: 5 (lower is better)
Translates to: GHIDVHVVTVHAGVCLLPGAGSK*VRTFLA
Trigger: CGCAAGGAATGTCCTGACCAACTTGGACCCAGCCCC...GGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAATGTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp AGGCTCTATCAATCTCCTCCAGGCCATCAAAATTCCGCAAGGCCAGATACAGCTTCTCTGCTTGTCCAGTaGTACCTTCAGAGGGCTCCC +
Preference number: 5 (lower is better)
Translates to: RLYQSPPGHQNSARPDTASLLVQ*YLQRAP
Trigger: GGGAGCCCTCTGAAGGTACAACTGGACAAGCAGAGA...AGCTGTATCTGGCCTTGCGGAATTTTGATGGCCTGGAGGAGATTGATAGAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp GGCGATGCTGAAGTTGAAGTCTTAGTTGATTTGGCTGGTTCTGCACTAGGCCCGAGTTTGGTCTGCCCTTaGCTGTCATGCAGTCTGCTC +
Preference number: 5 (lower is better)
Translates to: GDAEVEVLVDLAGSALGPSLVCP*LSCSLL
Trigger: GAGCAGACTGCATGACAGCAAAGGGCAGACCAAACT...CGGGCCTAGTGCAGAACCAGCCAAATCAACTAAGACTTCAACTTCAGCATCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp GAGGACAGCCCTGACGTAGGCACGGAGGTCACTGAGGTCATGCTGATCTGTCCTGACTTATTCCGTAGTTaGGAGGAAATGGAAACTGCT +
Preference number: 5 (lower is better)
Translates to: EDSPDVGTEVTEVMLICPDLFRS*EEMETA
Trigger: AGCAGTTTCCATTTCCTCCAAACTACGGAATAAGTC...AGGACAGATCAGCATGACCTCAGTGACCTCCGTGCCTACGTCAGGGCTGTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp TGCATTTGCCTGGGGAATCCGAGGGTTGCTCATAGTTGCTGGCATACCACTAGGTGTACATGCTGGTGTTaGCTTGCTGCCCAAAGTGTG +
Preference number: 5 (lower is better)
Translates to: CICLGNPRVAHSCWHTTRCTCWC*LAAQSV
Trigger: CACACTTTGGGCAGCAAGCAAACACCAGCATGTACA...CCTAGTGGTATGCCAGCAACTATGAGCAACCCTCGGATTCCCCAGGCAAATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp GCGCCCATCCATTTATGTCGGAGGGGGCCTGATAGGCTGGGTTGGCCTGAGACTTATAAAAATCAAGAATaGGTTCCTACAGCGGCTGCA +
Preference number: 5 (lower is better)
Translates to: APIHLCRRGPDRLGWPETYKNQE*VPTAAA
Trigger: TGCAGCCGCTGTAGGAACCAATTCTTGATTTTTATA...AGTCTCAGGCCAACCCAGCCTATCAGGCCCCCTCCGACATAAATGGATGGGCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS TCA 90 bp CCTCCTCTTCTGAATCAGGTAAAGGTTTTACCAGCATCCGACAATTaGAGGTATGGCTGTTCCGCCTCGGAGGTTCGCCAGACCAAGATC +
Preference number: 5 (lower is better)
Translates to: PPLLNQVKVLPASDN*RYGCSASEVRQTKI
Trigger: GATCTTGGTCTGGCGAACCTCCGAGGCGGAACAGCCATACCTTCAATTGTCGGATGCTGGTAAAACCTTTACCTGATTCAGAAGAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS CCA 90 bp GAAAGGTGGTGGGGATCTAAGTCCAGTACCGTAGTTTGGAGGAAATaGAAACTGCTGTGCATTTGCCTGGGGAATCCGAGGGTTGCTCAT +
Preference number: 5 (lower is better)
Translates to: ERWWGSKSSTVVWRK*KLLCICLGNPRVAH
Trigger: ATGAGCAACCCTCGGATTCCCCAGGCAAATGCACAGCAGTTTCCATTTCCTCCAAACTACGGTACTGGACTTAGATCCCCACCACCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521239.1
CDS-3UTR CAA 90 bp CGTGATATGAAGCCACTGGGTTGCTTCTCCTTGGGCACTCACCTGCTCGGGACCATGGGAAAATTTATATaGCTACTGAGGGTCATGTCC +
Preference number: 5 (lower is better)
Translates to: RDMKPLGCFSLGTHLLGTMGKFI*LLRVMS
Trigger: GGACATGACCCTCAGTAGCAATATAAATTTTCCCAT...GGTCCCGAGCAGGTGAGTGCCCAAGGAGAAGCAACCCAGTGGCTTCATATCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp GGACACATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCCCGAATCATACCTCCTaGGACTGGCCGGTTCATGGC +
Preference number: 5 (lower is better)
Translates to: GHIDVHVVTVHAGVCLLPPNHTS*DWPVHG
Trigger: GCCATGAACCGGCCAGTCCAAGGAGGTATGATTCGG...GGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAATGTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp AGGCTCTATCAATCTCCTCCAGGCCATCAAAATTCCGCAAGGCCAGATACAGCTTGGGGAATCCGAGGGTaGCTCATAGTTGCTGGCATA +
Preference number: 5 (lower is better)
Translates to: RLYQSPPGHQNSARPDTAWGIRG*LIVAGI
Trigger: TATGCCAGCAACTATGAGCAACCCTCGGATTCCCCA...AGCTGTATCTGGCCTTGCGGAATTTTGATGGCCTGGAGGAGATTGATAGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS GCA 90 bp AAGTCCAGTACCGTAGTTTGGAGGAAATGGAAACTGCTGTGCATTTaGCTGGGGAATCCGAGGGTTGCTCATAGTTGCTGGCATACCACT +
Preference number: 5 (lower is better)
Translates to: KSSTVVWRKWKLLCI*LGNPRVAHSCWHTT
Trigger: AGTGGTATGCCAGCAACTATGAGCAACCCTCGGATTCCCCAGGCAAATGCACAGCAGTTTCCATTTCCTCCAAACTACGGTACTGGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521239.1
CDS CCA 90 bp TCTGAATCAGGTAAAGGTTTTACCAGCATCCGACAATTGAAGGTATaGCTGTTCCGCCTCGGAGGTTCGCCAGACCAAGATCCCCCATTT +
Preference number: 5 (lower is better)
Translates to: SESGKGFTSIRQLKV*LFRLGGSPDQDPPF
Trigger: AAATGGGGGATCTTGGTCTGGCGAACCTCCGAGGCGGAACAGCCATACCTTCAATTGTCGGATGCTGGTAAAACCTTTACCTGATTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp TCTCCTCCAGGCCATCAAAATTCCGCAAGGCCAGATACAGCTGGTCCAGGAGAGAGCTGCTGCTTTCTCTaGTTCTTTGATCTGACGAAT +
Preference number: 5 (lower is better)
Translates to: SPPGHQNSARPDTAGPGESCCFL*FFDLTN
Trigger: ATTCGTCAGATCAAAGAACAAGAGAAAGCAGCAGCT...CTCTCCTGGACCAGCTGTATCTGGCCTTGCGGAATTTTGATGGCCTGGAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp GGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTGTCATATTTGGCAGCAGGTTTTaGACAAATTCCGTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: GLLIVAGIPLGATMLGVIFGSRF*TNSVWS
Trigger: GGACCACACGGAATTTGTCAAAAACCTGCTGCCAAA...TATGACACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp CTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTGTCATATTCAACACCAGCATCCGACAATaGAAGGTATGGCTGTTCCGC +
Preference number: 5 (lower is better)
Translates to: LIVAGIPLGATMLGVIFNTSIRQ*KVWLFR
Trigger: GCGGAACAGCCATACCTTCAATTGTCGGATGCTGGT...GTTGAATATGACACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp GGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTGTCATATTTGATGGACTTTGGTaGAGAGACAGCGAAGCACTG +
Preference number: 5 (lower is better)
Translates to: GLLIVAGIPLGATMLGVIFDGLW*RDSEAL
Trigger: CAGTGCTTCGCTGTCTCTCAACCAAAGTCCATCAAA...TATGACACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp GTTTGGAGGAAATGGAAACTGCTGTGCATTTGCCTGGGGAATCCGAGGGTTGCTCATGGGCATGCCCATTaGTTCCTTTGGGCCATTTAT +
Preference number: 5 (lower is better)
Translates to: VWRKWKLLCICLGNPRVAHGHAH*FLWAIY
Trigger: ATAAATGGCCCAAAGGAACAAATGGGCATGCCCATG...AGCAACCCTCGGATTCCCCAGGCAAATGCACAGCAGTTTCCATTTCCTCCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACAGGCTCATGCGATGCCTaGGTGAAAGCATGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTGSCDA*VKAWRW
Trigger: CCACCTCCATGCTTTCACCAAGGCATCGCATGAGCC...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACACCGAATCATACCTCCTaGGACTGGCCGGTTCATGGC +
Preference number: 5 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTPNHTS*DWPVHG
Trigger: GCCATGAACCGGCCAGTCCAAGGAGGTATGATTCGG...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp TGCATTTGCCTGGGGAATCCGAGGGTTGCTCATAGTTGCTGGCATACCACTAGGCATCATCAAAGTTCGTaGCTGAACTTGCTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: CICLGNPRVAHSCWHTTRHHQSS*LNLLLL
Trigger: CAGCAACAGCAAGTTCAGCAACGAACTTTGATGATG...CCTAGTGGTATGCCAGCAACTATGAGCAACCCTCGGATTCCCCAGGCAAATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp CTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTGTCATATTCAACGTTGGCCTGAGACTGTaGCATCATGGGACTCTGTGT +
Preference number: 5 (lower is better)
Translates to: LIVAGIPLGATMLGVIFNVGLRL*HHGTLC
Trigger: ACACAGAGTCCCATGATGCAACAGTCTCAGGCCAAC...GTTGAATATGACACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATCTCATGCCACCTGTGTaGGTCGCCATGGACACATTG +
Preference number: 5 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHLMPPV*VAMDTL
Trigger: CAATGTGTCCATGGCGACCAACACAGGTGGCATGAG...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp CTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTGTCATATTCAACACGACTGTGACTTTGTaGGTCTTCACGCACTGGGTG +
Preference number: 5 (lower is better)
Translates to: LIVAGIPLGATMLGVIFNTTVTL*VFTHWV
Trigger: CACCCAGTGCGTGAAGACCAACAAAGTCACAGTCGT...GTTGAATATGACACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATGCGTTTTCTCCCATTTaGGAGGCCAGAGTTGCTGGG +
Preference number: 5 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHAFSPI*EARVAG
Trigger: CCCAGCAACTCTGGCCTCCAAAATGGGAGAAAACGC...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTGGCCACCTCCCTGTATaGAGACCCCTCTCAAGTGGA +
Preference number: 5 (lower is better)
Translates to: KVEPFEGIYELVATEKCCGHLPV*RPLSSG
Trigger: TCCACTTGAGAGGGGTCTCAATACAGGGAGGTGGCC...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS TCA 90 bp TCCTATCATCCCTTGATTACCCATCATTCCTGGCTGAGGTATCACTaGGTAGGGACTACTGTTTCTGATTGGTGGGAAAGGTCCAGCACC +
Preference number: 5 (lower is better)
Translates to: SYHPLITHHSWLRYH*VGTTVSDWWERSST
Trigger: GGTGCTGGACCTTTCCCACCAATCAGAAACAGTAGTCCCTACTCAGTGATACCTCAGCCAGGAATGATGGGTAATCAAGGGATGATAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS CCA 90 bp CCAGCACCAGTTGGGCTTTGCAATGTGATGTCAAGTGGTAAATTCTaGTTTGGCAATAACCTGCCCAGTTGCCCTGGTCGTGGGTTATTA +
Preference number: 5 (lower is better)
Translates to: PAPVGLCNVMSSGKF*FGNNLPSCPGRGLL
Trigger: TAATAACCCACGACCAGGGCAACTGGGCAGGTTATTGCCAAACCAGAATTTACCACTTGACATCACATTGCAAAGCCCAACTGGTGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CAA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGGGGGCTGGGTCCAAGTaGGTCAGGACATTCCTTGCG +
Preference number: 5 (lower is better)
Translates to: VVISAINLNTLAFSPILEGAGSK*VRTFLA
Trigger: CGCAAGGAATGTCCTGACCAACTTGGACCCAGCCCC...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGCCCCAGCGCATCCTaGTCGATGACACCCTGCCCT +
Preference number: 5 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFGPSAS*SMTPCP
Trigger: AGGGCAGGGTGTCATCGACAAGGATGCGCTGGGGCC...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATAGACGTGATCTTGCCTaGGAGATCCTGGCGAGTAGT +
Preference number: 5 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHRRDLA*EILASS
Trigger: ACTACTCGCCAGGATCTCCAAGGCAAGATCACGTCT...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp ATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCAAAGTGGGCTCATGCGATGCCTaGGTGAAAGCATGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: IDVHVVTVHAGVCLLPKVGSCDA*VKAWRW
Trigger: CCACCTCCATGCTTTCACCAAGGCATCGCATGAGCC...CACTTTGGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACATCCAAGCTTCCCATCTaGCTGAGTGGGGGAGGATTC +
Preference number: 5 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTSKLPI*LSGGGF
Trigger: GAATCCTCCCCCACTCAGCAAGATGGGAAGCTTGGA...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp GGACACATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCAAAATCTCCTCCAAGTaGTCCAGCTCACTGCCAGGC +
Preference number: 5 (lower is better)
Translates to: GHIDVHVVTVHAGVCLLPKISSK*SSSLPG
Trigger: GCCTGGCAGTGAGCTGGACAACTTGGAGGAGATTTT...GGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAATGTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp CTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTGTCATATTCAACTTGATGATGGCTTGCTaGTCAACTGATCCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: LIVAGIPLGATMLGVIFNLMMAC*STDPAG
Trigger: CCCTGCTGGATCAGTTGACAAGCAAGCCATCATCAA...GTTGAATATGACACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTTGGAGGAGCTTGTTGTaGGCTATACTGAGGTCCCCC +
Preference number: 5 (lower is better)
Translates to: KVEPFEGIYELVATEKCCWRSLL*AILRSP
Trigger: GGGGGACCTCAGTATAGCCAACAACAAGCTCCTCCA...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CAA 90 bp AGGCTCTATCAATCTCCTCCAGGCCATCAAAATTCCGCAAGGCCAGATACAGCTATTTGGAGGAGCTTGTaGTTGGCTATACTGAGGTCC +
Preference number: 5 (lower is better)
Translates to: RLYQSPPGHQNSARPDTAIWRSL*LAILRS
Trigger: GGACCTCAGTATAGCCAACAACAAGCTCCTCCAAAT...AGCTGTATCTGGCCTTGCGGAATTTTGATGGCCTGGAGGAGATTGATAGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTATGGGGCAGTCTGATTaGGAGGAGCTTGTTGTTGGC +
Preference number: 5 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVMGQSD*EELVVG
Trigger: GCCAACAACAAGCTCCTCCAAATCAGACTGCCCCAT...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACAGCTACCCTGGGCCATTaGTGCCTGAGATGCATACTG +
Preference number: 5 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTATLGH*CLRCIL
Trigger: CAGTATGCATCTCAGGCACAAATGGCCCAGGGTAGC...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp AGGCTCTATCAATCTCCTCCAGGCCATCAAAATTCCGCAAGGCCAGATACAGCTCTGTTGCTGATGCATTaGTCTCTGTCGAAGATGCTG +
Preference number: 5 (lower is better)
Translates to: RLYQSPPGHQNSARPDTALLLMH*SLSKML
Trigger: CAGCATCTTCGACAGAGACAAATGCATCAGCAACAG...AGCTGTATCTGGCCTTGCGGAATTTTGATGGCCTGGAGGAGATTGATAGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp GGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTGTCATAAGTTCGTTGCTGAACTaGCTGTTGCTGATGCATTTG +
Preference number: 5 (lower is better)
Translates to: GLLIVAGIPLGATMLGVISSLLN*LLLMHL
Trigger: CAAATGCATCAGCAACAGCAAGTTCAGCAACGAACT...TATGACACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACAGAAACTGCTGTGCATTaGCCTGGGGAATCCGAGGGT +
Preference number: 5 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTETAVH*PGESEG
Trigger: ACCCTCGGATTCCCCAGGCAAATGCACAGCAGTTTC...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS CCA 90 bp CCCAGAACCACCAAACCTGCCCATGGGCATGCCCATTTGTTCCTTTaGGCCATTTATGGGAAAATTTATATTGCTACTGAGGGTCATGTC +
Preference number: 5 (lower is better)
Translates to: PRTTKPAHGHAHLFL*AIYGKIYIATEGHV
Trigger: GACATGACCCTCAGTAGCAATATAAATTTTCCCATAAATGGCCCAAAGGAACAAATGGGCATGCCCATGGGCAGGTTTGGTGGTTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp ATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCAAAGTGATTCCTTGCGCTTTCTaGTCTCTGCCCTGGAGGGGT +
Preference number: 5 (lower is better)
Translates to: IDVHVVTVHAGVCLLPKVIPCAF*SLPWRG
Trigger: ACCCCTCCAGGGCAGAGACAAGAAAGCGCAAGGAAT...CACTTTGGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTGAGTTTGCTCTTCGTTaGTGCAGCAACAAGAGTGCC +
Preference number: 5 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVEFALR*CSNKSA
Trigger: GGCACTCTTGTTGCTGCACAAACGAAGAGCAAACTC...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGTGGCTTCCCCATCGTTaGTCCAGTCAGATCCGGATT +
Preference number: 5 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWWLPHR*SSQIRI
Trigger: AATCCGGATCTGACTGGACAAACGATGGGGAAGCCA...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACATACCCTGAGGAGTGGTaGCTTGCATGCCTGACACAT +
Preference number: 5 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTYPEEW*LACLTH
Trigger: ATGTGTCAGGCATGCAAGCAACCACTCCTCAGGGTA...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATGCAGGTTGGGGTCATTaGTTTCCTTTTGCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHAGWGH*FPFALQ
Trigger: CTGGAGAGCAAAAGGAAACAAATGACCCCAACCTGC...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTAGTTTGGTCTGCCCTTaGCTGTCATGCAGTCTGCTC +
Preference number: 5 (lower is better)
Translates to: KVEPFEGIYELVATEKCCSLVCP*LSCSLL
Trigger: GAGCAGACTGCATGACAGCAAAGGGCAGACCAAACT...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CAA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGGCATTCTCTTTCTTCTaGGGGCTCACCGGCTCTTGT +
Preference number: 5 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWAFSFF*GLTGSC
Trigger: ACAAGAGCCGGTGAGCCCCAAGAAGAAAGAGAATGC...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTCTGAAGCGTCTGTCTTaGGCCAGGCTGGCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFLKRLS*ARLAAG
Trigger: CCCAGCAGCCAGCCTGGCCAAAGACAGACGCTTCAG...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACAAAATGGCTGCCTGTTTaGGCTGGCAAAAGACGCCTG +
Preference number: 5 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTKWLPV*AGKRRL
Trigger: CAGGCGTCTTTTGCCAGCCAAAACAGGCAGCCATTT...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTTTCTGGATCTACTGCTaGGCTCTGGCTGACCAGTTC +
Preference number: 5 (lower is better)
Translates to: KVEPFEGIYELVATEKCCFWIYC*ALADQF
Trigger: GAACTGGTCAGCCAGAGCCAAGCAGTAGATCCAGAA...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CAA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGTGGGGAATCCGAGGGTaGCTCATAGTTGCTGGCATA +
Preference number: 5 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWWGIRG*LIVAGI
Trigger: TATGCCAGCAACTATGAGCAACCCTCGGATTCCCCA...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGGGGCAACCCAATGGTTaGGTGGAGAAAAGTAGAGCC +
Preference number: 5 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWGQPNG*VEKSRA
Trigger: GGCTCTACTTTTCTCCACCAAACCATTGGGTTGCCC...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CAA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATTTTGGCAGCAGGTTTTaGACAAATTCCGTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHFGSRF*TNSVWS
Trigger: GGACCACACGGAATTTGTCAAAAACCTGCTGCCAAA...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACAGAGTTTGCTCTTCGTTaGTGCAGCAACAAGAGTGCC +
Preference number: 5 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTEFALR*CSNKSA
Trigger: GGCACTCTTGTTGCTGCACAAACGAAGAGCAAACTC...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGTCTCTGCTTGTCCAGTaGTACCTTCAGAGGGCTCCC +
Preference number: 5 (lower is better)
Translates to: VVISAINLNTLAFSPILESLLVQ*YLQRAP
Trigger: GGGAGCCCTCTGAAGGTACAACTGGACAAGCAGAGA...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTGTCATTTGTTTCCTTTaGCTCTCCAGGATGGCAGCT +
Preference number: 5 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVVICFL*LSRMAA
Trigger: AGCTGCCATCCTGGAGAGCAAAAGGAAACAAATGAC...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACAGCAGGTTGGGGTCATTaGTTTCCTTTTGCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTAGWGH*FPFALQ
Trigger: CTGGAGAGCAAAAGGAAACAAATGACCCCAACCTGC...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGAGCAGCTGCAGGAGTTaGGTCTGCCCTTTGCTGTCA +
Preference number: 5 (lower is better)
Translates to: VVISAINLNTLAFSPILESSCRS*VCPLLS
Trigger: TGACAGCAAAGGGCAGACCAAACTCCTGCAGCTGCT...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGTTGATGATGGCTTGCTaGTCAACTGATCCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWLMMAC*STDPAG
Trigger: CCCTGCTGGATCAGTTGACAAGCAAGCCATCATCAA...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp CATATAAATTGGATTTTATGTACCTTACAAAACTTCGGCTTAGTCAGCACTGCTCTGAAGCGTCTGTCTTaGGCCAGGCTGGCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: HINWILCTLQNFGLVSTALKRLS*ARLAAG
Trigger: CCCAGCAGCCAGCCTGGCCAAAGACAGACGCTTCAG...AGCAGTGCTGACTAAGCCGAAGTTTTGTAAGGTACATAAAATCCAATTTATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTTTCCAGGCAGCTGGTTaGGGAACAGGTTGCCTCCCC +
Preference number: 5 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFFQAAG*GTGCLP
Trigger: GGGGAGGCAACCTGTTCCCAAACCAGCTGCCTGGAA...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CAA 90 bp ATCCGAGGGTTGCTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTGGTCTAATCAAGGCATaGATATCCTTTACAAAACAC +
Preference number: 5 (lower is better)
Translates to: IRGLLIVAGIPLGATMLGGLIKA*ISFTKH
Trigger: GTGTTTTGTAAAGGATATCAATGCCTTGATTAGACC...ACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAGCAACCCTCGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS GCA 90 bp GTGATGTCAAGTGGTAAATTCTGGTTTGGCAATAACCTGCCCAGTTaGCCTGGTCGTGGGTTATTAAAAGTGCTCTGTGAAATTCGCAGT +
Preference number: 5 (lower is better)
Translates to: VMSSGKFWFGNNLPS*PGRGLLKVLCEIRS
Trigger: ACTGCGAATTTCACAGAGCACTTTTAATAACCCACGACCAGGGCAACTGGGCAGGTTATTGCCAAACCAGAATTTACCACTTGACATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS GCA 90 bp CTACTGTTTCTGATTGGTGGGAAAGGTCCAGCACCAGTTGGGCTTTaGAATGTGATGTCAAGTGGTAAATTCTGGTTTGGCAATAACCTG +
Preference number: 5 (lower is better)
Translates to: LLFLIGGKGPAPVGL*NVMSSGKFWFGNNL
Trigger: CAGGTTATTGCCAAACCAGAATTTACCACTTGACATCACATTGCAAAGCCCAACTGGTGCTGGACCTTTCCCACCAATCAGAAACAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CAA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGGACACAAACACAACGTaGCCTTCCAGGTTCACTACA +
Preference number: 5 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWDTNTT*PSRFTT
Trigger: TGTAGTGAACCTGGAAGGCAACGTTGTGTTTGTGTC...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACAGACACAAACACAACGTaGCCTTCCAGGTTCACTACA +
Preference number: 5 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTDTNTT*PSRFTT
Trigger: TGTAGTGAACCTGGAAGGCAACGTTGTGTTTGTGTC...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACACATGGGCATGCCCATTaGTTCCTTTGGGCCATTTAT +
Preference number: 5 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTHGHAH*FLWAIY
Trigger: ATAAATGGCCCAAAGGAACAAATGGGCATGCCCATG...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp GGACACATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCGTCCAAAACAGTCTTTaGAGTCCAAGCTTCCCATCT +
Preference number: 5 (lower is better)
Translates to: GHIDVHVVTVHAGVCLLPVQNSL*SPSFPS
Trigger: AGATGGGAAGCTTGGACTCAAAAGACTGTTTTGGAC...GGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAATGTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATCTACCTGTGGAGTCTTaGTTTGTATCCGACAAAGAG +
Preference number: 5 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHLPVES*FVSDKE
Trigger: CTCTTTGTCGGATACAAACAAAGACTCCACAGGTAG...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGGCTTCTGCTGTTAACTaGGCCAAGTCCACAGGGGAA +
Preference number: 5 (lower is better)
Translates to: VVISAINLNTLAFSPILEASAVN*AKSTGE
Trigger: TTCCCCTGTGGACTTGGCCAAGTTAACAGCAGAAGC...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATAGTTGCATGAGGTCATaGATGATGGCTTGCTTGTCA +
Preference number: 5 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHSCMRS*MMACLS
Trigger: TGACAAGCAAGCCATCATCAATGACCTCATGCAACT...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTAGTTGCATGAGGTCATaGATGATGGCTTGCTTGTCA +
Preference number: 5 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVSCMRS*MMACLS
Trigger: TGACAAGCAAGCCATCATCAATGACCTCATGCAACT...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTGTTTCCTATCATCCCTaGATTACCCATCATTCCTGG +
Preference number: 5 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVVSYHP*ITHHSW
Trigger: CCAGGAATGATGGGTAATCAAGGGATGATAGGAAAC...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CAA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTCTGTTGCTGATGCATTaGTCTCTGTCGAAGATGCTG +
Preference number: 5 (lower is better)
Translates to: KVEPFEGIYELVATEKCCLLLMH*SLSKML
Trigger: CAGCATCTTCGACAGAGACAAATGCATCAGCAACAG...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CAA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATAGTTCGTTGCTGAACTaGCTGTTGCTGATGCATTTG +
Preference number: 5 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHSSLLN*LLLMHL
Trigger: CAAATGCATCAGCAACAGCAAGTTCAGCAACGAACT...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp ACTGCTCACACTAGAAATACAAACATCAATGCAGGTGAACAAAGTGATGTTCAGCATGCTGGTGTTTGCTaGCTGCCCAAAGTGTGGTGG +
Preference number: 5 (lower is better)
Translates to: TAHTRNTNINAGEQSDVQHAGVC*LPKVWW
Trigger: CCACCACACTTTGGGCAGCAAGCAAACACCAGCATG...CTGAACATCACTTTGTTCACCTGCATTGATGTTTGTATTTCTAGTGTGAGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CAA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGGGCAGGTCAGTTGGGTaGAAACAAATAGACACAGCT +
Preference number: 5 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWGRSVG*KQIDTA
Trigger: AGCTGTGTCTATTTGTTTCAACCCAACTGACCTGCC...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGACGACTGTGACTTTGTaGGTCTTCACGCACTGGGTG +
Preference number: 5 (lower is better)
Translates to: VVISAINLNTLAFSPILETTVTL*VFTHWV
Trigger: CACCCAGTGCGTGAAGACCAACAAAGTCACAGTCGT...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp ACTGCTCACACTAGAAATACAAACATCAATGCAGGTGAACAAAGTGATGTTCAGACCAGCATCCGACAATaGAAGGTATGGCTGTTCCGC +
Preference number: 5 (lower is better)
Translates to: TAHTRNTNINAGEQSDVQTSIRQ*KVWLFR
Trigger: GCGGAACAGCCATACCTTCAATTGTCGGATGCTGGT...CTGAACATCACTTTGTTCACCTGCATTGATGTTTGTATTTCTAGTGTGAGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CAA 90 bp GGACACATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCATTTTATGCTTCTCCTaGAGCGAGGTTCCATGTGTA +
Preference number: 5 (lower is better)
Translates to: GHIDVHVVTVHAGVCLLPILCFS*SEVPCV
Trigger: TACACATGGAACCTCGCTCAAGGAGAAGCATAAAAT...GGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAATGTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp TCATCACTCGGAGACTCAGCTGCAGGATGTGGACATAGCAAGTCATCTGGAGAATCATTGCTATTAATTTaGTGTTACTGGCAGGATCTG +
Preference number: 5 (lower is better)
Translates to: SSLGDSAAGCGHSKSSGESLLLI*CYWQDL
Trigger: CAGATCCTGCCAGTAACACAAAATTAATAGCAATGA...TTCTCCAGATGACTTGCTATGTCCACATCCTGCAGCTGAGTCTCCGAGTGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp ACTGCTCACACTAGAAATACAAACATCAATGCAGGTGAACAAAGTGATGTTCAGAAAATCTCCTCCAAGTaGTCCAGCTCACTGCCAGGC +
Preference number: 5 (lower is better)
Translates to: TAHTRNTNINAGEQSDVQKISSK*SSSLPG
Trigger: GCCTGGCAGTGAGCTGGACAACTTGGAGGAGATTTT...CTGAACATCACTTTGTTCACCTGCATTGATGTTTGTATTTCTAGTGTGAGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CAA 90 bp CAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCTCCTTAAATACACCATGGTGTGAAAGTTaGGATCTTGCATGGGAGAAT +
Preference number: 5 (lower is better)
Translates to: QCLEPNRNRTRAWFSLNTPWCES*DLAWEN
Trigger: ATTCTCCCATGCAAGATCCAAACTTTCACACCATGG...TGTATTTAAGGAGAACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGGGAAACATTGCTGATTaGATTCATAAGTGGCTGGCG +
Preference number: 5 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWGNIAD*IHKWLA
Trigger: CGCCAGCCACTTATGAATCAAATCAGCAATGTTTCC...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTTTGCTGAACTTGCTGTaGCTGATGCATTTGTCTCTG +
Preference number: 5 (lower is better)
Translates to: KVEPFEGIYELVATEKCCLLNLL*LMHLSL
Trigger: CAGAGACAAATGCATCAGCAACAGCAAGTTCAGCAA...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CAA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGAAACTGCTGTGCATTaGCCTGGGGAATCCGAGGGT +
Preference number: 5 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFETAVH*PGESEG
Trigger: ACCCTCGGATTCCCCAGGCAAATGCACAGCAGTTTC...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGGTCGCCATGGACACATaGATGTTCATGTTGTTACTG +
Preference number: 5 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWVAMDT*MFMLLL
Trigger: CAGTAACAACATGAACATCAATGTGTCCATGGCGAC...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGCGTTTTCTCCCATTTaGGAGGCCAGAGTTGCTGGG +
Preference number: 5 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFAFSPI*EARVAG
Trigger: CCCAGCAACTCTGGCCTCCAAAATGGGAGAAAACGC...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGTGTGCAGAGGATGCTTaGCTCTTAGGCAGCATACCA +
Preference number: 5 (lower is better)
Translates to: VVISAINLNTLAFSPILECAEDA*LLGSIP
Trigger: TGGTATGCTGCCTAAGAGCAAAGCATCCTCTGCACA...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CAA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGCCCATCCCACTCATCTaGAACACATATCAGCAACTG +
Preference number: 5 (lower is better)
Translates to: VVISAINLNTLAFSPILEPIPLI*NTYQQL
Trigger: CAGTTGCTGATATGTGTTCAAGATGAGTGGGATGGG...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp CATATAAATTGGATTTTATGTACCTTACAAAACTTCGGCTTAGTCAGCACTGCTATTCCTTGCGCTTTCTaGTCTCTGCCCTGGAGGGGT +
Preference number: 5 (lower is better)
Translates to: HINWILCTLQNFGLVSTAIPCAF*SLPWRG
Trigger: ACCCCTCCAGGGCAGAGACAAGAAAGCGCAAGGAAT...AGCAGTGCTGACTAAGCCGAAGTTTTGTAAGGTACATAAAATCCAATTTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTACTGAATGCCAATCCTaGTCTCAGTACTTCATGATG +
Preference number: 5 (lower is better)
Translates to: KVEPFEGIYELVATEKCCTECQS*SQYFMM
Trigger: CATCATGAAGTACTGAGACAAGGATTGGCATTCAGT...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CAA 90 bp ATTGATGTTCATGTTGTTACTGTACATGCTGGTGTTTGCTTGCTGCCCAAAGTGCTACCTGTGGAGTCTTaGTTTGTATCCGACAAAGAG +
Preference number: 5 (lower is better)
Translates to: IDVHVVTVHAGVCLLPKVLPVES*FVSDKE
Trigger: CTCTTTGTCGGATACAAACAAAGACTCCACAGGTAG...CACTTTGGGCAGCAAGCAAACACCAGCATGTACAGTAACAACATGAACATCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTATTTTATGCTTCTCCTaGAGCGAGGTTCCATGTGTA +
Preference number: 5 (lower is better)
Translates to: KVEPFEGIYELVATEKCCILCFS*SEVPCV
Trigger: TACACATGGAACCTCGCTCAAGGAGAAGCATAAAAT...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CAA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGTCCAGTCTCTCAAGTTaGGGGGTTATTTCTGGTAAA +
Preference number: 5 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWSSLSS*GVISGK
Trigger: TTTACCAGAAATAACCCCCAAACTTGAGAGACTGGA...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTTGTTGGAATCCTGACTaGAGAACTGTTCTGGATCTA +
Preference number: 5 (lower is better)
Translates to: KVEPFEGIYELVATEKCCCWNPD*RTVLDL
Trigger: TAGATCCAGAACAGTTCTCAAGTCAGGATTCCAACA...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CAA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGTTGGCCTGAGACTGTaGCATCATGGGACTCTGTGT +
Preference number: 5 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFVGLRL*HHGTLC
Trigger: ACACAGAGTCCCATGATGCAACAGTCTCAGGCCAAC...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp CTCATAGTTGCTGGCATACCACTAGGAGCCACCATGCTTGGTGTCATATTCAACTGTCAACATTTACTTTaGCAGGAGAGATCTAAGTTG +
Preference number: 5 (lower is better)
Translates to: LIVAGIPLGATMLGVIFNCQHLL*QERSKL
Trigger: CAACTTAGATCTCTCCTGCAAAAGTAAATGTTGACA...GTTGAATATGACACCAAGCATGGTGGCTCCTAGTGGTATGCCAGCAACTATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS-3UTR CAA 90 bp CCCTCTCACAGGCTCCTTTTCATCTGTTCAGTAACTGGAGACTCTTTCCAACATTTCTTGGTATTGGAGTaGTCTGAAACTGACACCTAT +
Preference number: 5 (lower is better)
Translates to: PSHRLLFICSVTGDSFQHFLVLE*SETDTY
Trigger: ATAGGTGTCAGTTTCAGACAACTCCAATACCAAGAA...ATGTTGGAAAGAGTCTCCAGTTACTGAACAGATGAAAAGGAGCCTGTGAGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CAA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTATAAATAGGGGTAGTTaGTACATTTTTCACCCTGCC +
Preference number: 5 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVINRGS*YIFHPA
Trigger: GGCAGGGTGAAAAATGTACAAACTACCCCTATTTAT...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CAA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTCATGAAGTTGCGGATTaGTCTGAATTAGGATTGACA +
Preference number: 5 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVHEVAD*SELGLT
Trigger: TGTCAATCCTAATTCAGACAAATCCGCAACTTCATG...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS GCA 90 bp AGGTTCATTAGTAGTCTGAGAACGGATGAGTTTGCTCTTCGTTTGTaGAGCAACAAGAGTGCCATCAGACAAGGAAAAACGATAGATTTG +
Preference number: 5 (lower is better)
Translates to: RFISSLRTDEFALRL*SNKSAIRQGKTIDL
Trigger: CAAATCTATCGTTTTTCCTTGTCTGATGGCACTCTTGTTGCTGCACAAACGAAGAGCAAACTCATCCGTTCTCAGACTACTAATGAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp CATATAAATTGGATTTTATGTACCTTACAAAACTTCGGCTTAGTCAGCACTGCTTGGTCAGGACATTCCTaGCGCTTTCTTGTCTCTGCC +
Preference number: 5 (lower is better)
Translates to: HINWILCTLQNFGLVSTAWSGHS*RFLVSA
Trigger: GGCAGAGACAAGAAAGCGCAAGGAATGTCCTGACCA...AGCAGTGCTGACTAAGCCGAAGTTTTGTAAGGTACATAAAATCCAATTTATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTTTTTCAGTGTTCCTTTaGGGGCTGGGTCCAAGTTGG +
Preference number: 5 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFFSVFL*GLGPSW
Trigger: CCAACTTGGACCCAGCCCCAAAAGGAACACTGAAAA...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
42% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp TGCTTCTATAGTGATCAATATGATCAGAGGATTCCTTCACTTACTTTTCTTCTCTGGCTTCCCCATCGTTaGTCCAGTCAGATCCGGATT +
Preference number: 5 (lower is better)
Translates to: CFYSDQYDQRIPSLTFLLWLPHR*SSQIRI
Trigger: AATCCGGATCTGACTGGACAAACGATGGGGAAGCCA...GAGAAGAAAAGTAAGTGAAGGAATCCTCTGATCATATTGATCACTATAGAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CAA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTATGGGAAAATTTATATaGCTACTGAGGGTCATGTCC +
Preference number: 5 (lower is better)
Translates to: KVEPFEGIYELVATEKCCMGKFI*LLRVMS
Trigger: GGACATGACCCTCAGTAGCAATATAAATTTTCCCAT...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CAA 90 bp CATATAAATTGGATTTTATGTACCTTACAAAACTTCGGCTTAGTCAGCACTGCTGCAGCTGCTCTCTGCTaGTCCAGTTGTACCTTCAGA +
Preference number: 5 (lower is better)
Translates to: HINWILCTLQNFGLVSTAAAALC*SSCTFR
Trigger: TCTGAAGGTACAACTGGACAAGCAGAGAGCAGCTGC...AGCAGTGCTGACTAAGCCGAAGTTTTGTAAGGTACATAAAATCCAATTTATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGGTGGTAAATTCTGGTTaGGCAATAACCTGCCCAGTT +
Preference number: 5 (lower is better)
Translates to: VVISAINLNTLAFSPILEVVNSG*AITCPV
Trigger: AACTGGGCAGGTTATTGCCAAACCAGAATTTACCAC...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CAA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGCCATGGTGTGAAAGTTaGGATCTTGCATGGGAGAAT +
Preference number: 5 (lower is better)
Translates to: VVISAINLNTLAFSPILEPWCES*DLAWEN
Trigger: ATTCTCCCATGCAAGATCCAAACTTTCACACCATGG...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp ACTGCTCACACTAGAAATACAAACATCAATGCAGGTGAACAAAGTGATGTTCAGTTTTGGAGGCCAGAGTaGCTGGGGAACAGAATAAAC +
Preference number: 5 (lower is better)
Translates to: TAHTRNTNINAGEQSDVQFWRPE*LGNRIN
Trigger: GTTTATTCTGTTCCCCAGCAACTCTGGCCTCCAAAA...CTGAACATCACTTTGTTCACCTGCATTGATGTTTGTATTTCTAGTGTGAGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CAA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTGGTCTAATCAAGGCATaGATATCCTTTACAAAACAC +
Preference number: 5 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVGLIKA*ISFTKH
Trigger: GTGTTTTGTAAAGGATATCAATGCCTTGATTAGACC...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp CAAAGCAAGAAACCAGTGTCTGGAACCGAACAGGAACAGAACAAGAGCATGGTTACTTACCATCTATCTTaGGGCTATATCTCTTCCTAT +
Preference number: 5 (lower is better)
Translates to: QSKKPVSGTEQEQNKSMVTYHLS*GYISSY
Trigger: ATAGGAAGAGATATAGCCCAAAGATAGATGGTAAGT...AACCATGCTCTTGTTCTGTTCCTGTTCGGTTCCAGACACTGGTTTCTTGCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CAA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGTCATTTGTTTCCTTTaGCTCTCCAGGATGGCAGCT +
Preference number: 5 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFVICFL*LSRMAA
Trigger: AGCTGCCATCCTGGAGAGCAAAAGGAAACAAATGAC...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp AAAGTAGAGCCTTTTGAGGGGATATATGAACTGGTGGCCACTGAGAAGTGTTGTTCATTGCTATTAATTTaGTGTTACTGGCAGGATCTG +
Preference number: 5 (lower is better)
Translates to: KVEPFEGIYELVATEKCCSLLLI*CYWQDL
Trigger: CAGATCCTGCCAGTAACACAAAATTAATAGCAATGA...ACAACACTTCTCAGTGGCCACCAGTTCATATATCCCCTCAAAAGGCTCTACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CAA 90 bp CATATAAATTGGATTTTATGTACCTTACAAAACTTCGGCTTAGTCAGCACTGCTAGCACCAGTTGGGCTTaGCAATGTGATGTCAAGTGG +
Preference number: 5 (lower is better)
Translates to: HINWILCTLQNFGLVSTASTSWA*QCDVKW
Trigger: CCACTTGACATCACATTGCAAAGCCCAACTGGTGCT...AGCAGTGCTGACTAAGCCGAAGTTTTGTAAGGTACATAAAATCCAATTTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CAA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTATTTGGAGGAGCTTGTaGTTGGCTATACTGAGGTCC +
Preference number: 5 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFIWRSL*LAILRS
Trigger: GGACCTCAGTATAGCCAACAACAAGCTCCTCCAAAT...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGAAGTCTTAGTTGATTaGGCTGGTTCTGCACTAGGC +
Preference number: 5 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFEVLVD*AGSALG
Trigger: GCCTAGTGCAGAACCAGCCAAATCAACTAAGACTTC...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp TGCTTCTATAGTGATCAATATGATCAGAGGATTCCTTCACTTACTTTTCTTCTCTGTACATGCTGGTGTTaGCTTGCTGCCCAAAGTGTG +
Preference number: 5 (lower is better)
Translates to: CFYSDQYDQRIPSLTFLLCTCWC*LAAQSV
Trigger: CACACTTTGGGCAGCAAGCAAACACCAGCATGTACA...GAGAAGAAAAGTAAGTGAAGGAATCCTCTGATCATATTGATCACTATAGAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CAA 90 bp TCTTTAGAGCTTTCTAGAGATACGACTGTGACTTTGTTGGTCTTCACGCACTGGCTAGATTTTAGCATTTaGAGGTTCTTGCACATAGCT +
Preference number: 5 (lower is better)
Translates to: SLELSRDTTVTLLVFTHWLDFSI*RFLHIA
Trigger: AGCTATGTGCAAGAACCTCAAAATGCTAAAATCTAG...CCAGTGCGTGAAGACCAACAAAGTCACAGTCGTATCTCTAGAAAGCTCTAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CAA 90 bp ACTGCTCACACTAGAAATACAAACATCAATGCAGGTGAACAAAGTGATGTTCAGAGCTGCTGCTTTCTCTaGTTCTTTGATCTGACGAAT +
Preference number: 5 (lower is better)
Translates to: TAHTRNTNINAGEQSDVQSCCFL*FFDLTN
Trigger: ATTCGTCAGATCAAAGAACAAGAGAAAGCAGCAGCT...CTGAACATCACTTTGTTCACCTGCATTGATGTTTGTATTTCTAGTGTGAGCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CAA 90 bp CATATAAATTGGATTTTATGTACCTTACAAAACTTCGGCTTAGTCAGCACTGCTTTTGATGGACTTTGGTaGAGAGACAGCGAAGCACTG +
Preference number: 5 (lower is better)
Translates to: HINWILCTLQNFGLVSTAFDGLW*RDSEAL
Trigger: CAGTGCTTCGCTGTCTCTCAACCAAAGTCCATCAAA...AGCAGTGCTGACTAAGCCGAAGTTTTGTAAGGTACATAAAATCCAATTTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp CATATAAATTGGATTTTATGTACCTTACAAAACTTCGGCTTAGTCAGCACTGCTGAAGTCTTAGTTGATTaGGCTGGTTCTGCACTAGGC +
Preference number: 5 (lower is better)
Translates to: HINWILCTLQNFGLVSTAEVLVD*AGSALG
Trigger: GCCTAGTGCAGAACCAGCCAAATCAACTAAGACTTC...AGCAGTGCTGACTAAGCCGAAGTTTTGTAAGGTACATAAAATCCAATTTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTAAAGCCTGGATCAGGTaGCTGACTTATTCCGTAGTT +
Preference number: 5 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFKAWIR*LTYSVV
Trigger: AACTACGGAATAAGTCAGCAACCTGATCCAGGCTTT...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGACATTGATGTTCATGTaGTTACTGTACATGCTGGTG +
Preference number: 5 (lower is better)
Translates to: VVISAINLNTLAFSPILETLMFM*LLYMLV
Trigger: CACCAGCATGTACAGTAACAACATGAACATCAATGT...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp CATATAAATTGGATTTTATGTACCTTACAAAACTTCGGCTTAGTCAGCACTGCTGGCAGGTCAGTTGGGTaGAAACAAATAGACACAGCT +
Preference number: 5 (lower is better)
Translates to: HINWILCTLQNFGLVSTAGRSVG*KQIDTA
Trigger: AGCTGTGTCTATTTGTTTCAACCCAACTGACCTGCC...AGCAGTGCTGACTAAGCCGAAGTTTTGTAAGGTACATAAAATCCAATTTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp GTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGGAGAAGGTCATCAGTTTCTaGGTATTGGAGTTGTCTGAA +
Preference number: 5 (lower is better)
Translates to: VVISAINLNTLAFSPILEKVISF*VLELSE
Trigger: TTCAGACAACTCCAATACCAAGAAACTGATGACCTT...CTCCAAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CAA 90 bp CATATAAATTGGATTTTATGTACCTTACAAAACTTCGGCTTAGTCAGCACTGCTGTCCAAAACAGTCTTTaGAGTCCAAGCTTCCCATCT +
Preference number: 5 (lower is better)
Translates to: HINWILCTLQNFGLVSTAVQNSL*SPSFPS
Trigger: AGATGGGAAGCTTGGACTCAAAAGACTGTTTTGGAC...AGCAGTGCTGACTAAGCCGAAGTTTTGTAAGGTACATAAAATCCAATTTATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTTGTTGGAATCCTGACTaGAGAACTGTTCTGGATCTA +
Preference number: 5 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFCWNPD*RTVLDL
Trigger: TAGATCCAGAACAGTTCTCAAGTCAGGATTCCAACA...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp CATATAAATTGGATTTTATGTACCTTACAAAACTTCGGCTTAGTCAGCACTGCTTTGCTGAACTTGCTGTaGCTGATGCATTTGTCTCTG +
Preference number: 5 (lower is better)
Translates to: HINWILCTLQNFGLVSTALLNLL*LMHLSL
Trigger: CAGAGACAAATGCATCAGCAACAGCAAGTTCAGCAA...AGCAGTGCTGACTAAGCCGAAGTTTTGTAAGGTACATAAAATCCAATTTATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp TGCTTCTATAGTGATCAATATGATCAGAGGATTCCTTCACTTACTTTTCTTCTCCATCATCAAAGTTCGTaGCTGAACTTGCTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: CFYSDQYDQRIPSLTFLLHHQSS*LNLLLL
Trigger: CAGCAACAGCAAGTTCAGCAACGAACTTTGATGATG...GAGAAGAAAAGTAAGTGAAGGAATCCTCTGATCATATTGATCACTATAGAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CAA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTGACTTATTCCGTAGTTaGGAGGAAATGGAAACTGCT +
Preference number: 5 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFDLFRS*EEMETA
Trigger: AGCAGTTTCCATTTCCTCCAAACTACGGAATAAGTC...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTACTGATTGTGTATCTTaGGGTTCTGCAAGTGGATCT +
Preference number: 5 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFTDCVS*GSASGS
Trigger: AGATCCACTTGCAGAACCCAAAGATACACAATCAGT...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CAA 90 bp CATATAAATTGGATTTTATGTACCTTACAAAACTTCGGCTTAGTCAGCACTGCTTCCAGTCTCTCAAGTTaGGGGGTTATTTCTGGTAAA +
Preference number: 5 (lower is better)
Translates to: HINWILCTLQNFGLVSTASSLSS*GVISGK
Trigger: TTTACCAGAAATAACCCCCAAACTTGAGAGACTGGA...AGCAGTGCTGACTAAGCCGAAGTTTTGTAAGGTACATAAAATCCAATTTATATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTTATAAAAATCAAGAATaGGTTCCTACAGCGGCTGCA +
Preference number: 5 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFYKNQE*VPTAAA
Trigger: TGCAGCCGCTGTAGGAACCAATTCTTGATTTTTATA...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS-3UTR CAA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTATGAAGGGAACTGATTaGGCTTTTGCTTCTATAGTG +
Preference number: 5 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFMKGTD*AFASIV
Trigger: CACTATAGAAGCAAAAGCCAAATCAGTTCCCTTCAT...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS-3UTR CAA 90 bp ATCTGTCGTGATATCTGCTATCAATTTAAACACACTGGCGTTTTCTCCCATTTTTGTCAACATTTACTTTaGCAGGAGAGATCTAAGTTG +
Preference number: 5 (lower is better)
Translates to: ICRDICYQFKHTGVFSHFCQHLL*QERSKL
Trigger: CAACTTAGATCTCTCCTGCAAAAGTAAATGTTGACA...AAAATGGGAGAAAACGCCAGTGTGTTTAAATTGATAGCAGATATCACGACAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS GCA 72 bp CAAGAGAAATCGGCTCGGGTCGGTCACGCCGTCAGGTaGCGGCTGCCGTCGGCGCTGACCTTCGCCGCCGAA +
Preference number: 6 (lower is better)
Translates to: QEKSARVGHAVR*RLPSALTFAAE
Trigger: TTCGGCGGCGAAGGTCAGCGCCGACGGCAGCCGGCACCTGACGGCGTGACCGACCCGAGCCGATTTCTCTTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS GCA 72 bp CCCGGCAGGTCAGCTCCCTGCCTTCGATTGGCTCACTaGCCCATCAGTCAGACGCACCGAGATTCGGGTCGG +
Preference number: 6 (lower is better)
Translates to: PGRSAPCLRLAH*PISQTHRDSGR
Trigger: CCGACCCGAATCTCGGTGCGTCTGACTGATGGGGCAGTGAGCCAATCGAAGGCAGGGAGCTGACCTGCCGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520416.1
CDS CAA 90 bp GTGGGATTCGAGGGCTGCCAGCCACTCCAGGGCTCATGCGATGCCTaGGTGAAAGCATGGAGGTGGGCTGTCCTGGATTCATGCCAGGGC +
Preference number: 6 (lower is better)
Translates to: VGFEGCQPLQGSCDA*VKAWRWAVLDSCQG
Trigger: GCCCTGGCATGAATCCAGGACAGCCCACCTCCATGCTTTCACCAAGGCATCGCATGAGCCCTGGAGTGGCTGGCAGCCCTCGAATCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS TCA 72 bp GCCTCGGCAGCCTCTGCGGGTCGGAGCCCCTATAAGTaGCACAACCCCAGAAATCAAGGAGCGGGTGACTCG +
Preference number: 6 (lower is better)
Translates to: ASAASAGRSPYK*HNPRNQGAGDS
Trigger: CGAGTCACCCGCTCCTTGATTTCTGGGGTTGTGTCACTTATAGGGGCTCCGACCCGCAGAGGCTGCCGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS TCA 72 bp GCTCGGTCTCTGGTTTGGGAAAGTTTCCCCTACCAGTaGCGGACCCAGAACGCGGGAGGCCCAGTCCAGCTC +
Preference number: 6 (lower is better)
Translates to: ARSLVWESFPYQ*RTQNAGGPVQL
Trigger: GAGCTGGACTGGGCCTCCCGCGTTCTGGGTCCGTCACTGGTAGGGGAAACTTTCCCAAACCAGAGACCGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520416.1
CDS CCA 72 bp GCGTCTGTCTTTGGCCAGGCTGGCTGCTGGGCCTCATaGGGATGCTGGCTGCTGGGTTCCGAATCATACCTC +
Preference number: 6 (lower is better)
Translates to: ASVFGQAGCWAS*GCWLLGSESYL
Trigger: GAGGTATGATTCGGAACCCAGCAGCCAGCATCCCCATGAGGCCCAGCAGCCAGCCTGGCCAAAGACAGACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000518363.2
CDS CAA 90 bp GGGCCTCATGGGGATGCTGGCTGCTGGGTTCCGAATCATACCTCCTaGGACTGGCCGGTTCATGGCACTGGTGGTAGCAGCACAGGTGAC +
Preference number: 6 (lower is better)
Translates to: GPHGDAGCWVPNHTS*DWPVHGTGGSSTGD
Trigger: GTCACCTGTGCTGCTACCACCAGTGCCATGAACCGGCCAGTCCAAGGAGGTATGATTCGGAACCCAGCAGCCAGCATCCCCATGAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000518363.2
CDS CAA 90 bp AGAGGACGAGGTGGCGGAGGAAGGTGTTCAGGCTCGGTCTCTGGTTaGGGAAAGTTTCCCCTACCAGTGACGGACCCAGAACGCGGGAGG +
Preference number: 6 (lower is better)
Translates to: RGRGGGGRCSGSVSG*GKFPLPVTDPERGR
Trigger: CCTCCCGCGTTCTGGGTCCGTCACTGGTAGGGGAAACTTTCCCAAACCAGAGACCGAGCCTGAACACCTTCCTCCGCCACCTCGTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520416.1
CDS GCA 72 bp ATTCGAGGGCTGCCAGCCACTCCAGGGCTCATGCGATaGCTTGGTGAAAGCATGGAGGTGGGCTGTCCTGGA +
Preference number: 6 (lower is better)
Translates to: IRGLPATPGLMR*LGESMEVGCPG
Trigger: TCCAGGACAGCCCACCTCCATGCTTTCACCAAGGCATCGCATGAGCCCTGGAGTGGCTGGCAGCCCTCGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS CCA 72 bp CCACTCCAGGGCTCATGCGATGCCTTGGTGAAAGCATaGAGGTGGGCTGTCCTGGATTCATGCCAGGGCTGC +
Preference number: 6 (lower is better)
Translates to: PLQGSCDALVKA*RWAVLDSCQGC
Trigger: GCAGCCCTGGCATGAATCCAGGACAGCCCACCTCCATGCTTTCACCAAGGCATCGCATGAGCCCTGGAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS CAA 72 bp GGGGATGCTGGCTGCTGGGTTCCGAATCATACCTCCTaGGACTGGCCGGTTCATGGCACTGGTGGTAGCAGC +
Preference number: 6 (lower is better)
Translates to: GDAGCWVPNHTS*DWPVHGTGGSS
Trigger: GCTGCTACCACCAGTGCCATGAACCGGCCAGTCCAAGGAGGTATGATTCGGAACCCAGCAGCCAGCATCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000518363.2
CDS CAA 90 bp ATCCAAGAGAAATCGACACCCGGCAGGTCAGCTCCCTGCCTTCGATaGGCTCACTGCCCCATCAGTCAGACGCACCGAGATTCGGGTCGG +
Preference number: 6 (lower is better)
Translates to: IQEKSTPGRSAPCLR*AHCPISQTHRDSGR
Trigger: CCGACCCGAATCTCGGTGCGTCTGACTGATGGGGCAGTGAGCCAATCGAAGGCAGGGAGCTGACCTGCCGGGTGTCGATTTCTCTTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520416.1
CDS GCA 72 bp TGTCATGCAGTCTGCTCTGCCCGTCAGCTCTCTCACTaGTCACGGCCGGGGGCAGGTTGGGGTCATTTGTTT +
Preference number: 6 (lower is better)
Translates to: CHAVCSARQLSH*SRPGAGWGHLF
Trigger: AAACAAATGACCCCAACCTGCCCCCGGCCGTGAGCAGTGAGAGAGCTGACGGGCAGAGCAGACTGCATGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000524223.1
CDS CCA 72 bp GCTGGCTGCTGGGTTCCGAATCATACCTCCTTGGACTaGCCGGTTCATGGCACTGGTGGTAGCAGCACAGGT +
Preference number: 6 (lower is better)
Translates to: AGCWVPNHTSLD*PVHGTGGSSTG
Trigger: ACCTGTGCTGCTACCACCAGTGCCATGAACCGGCCAGTCCAAGGAGGTATGATTCGGAACCCAGCAGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000518363.2
CDS CCA 72 bp GGGATGCTGGCTGCTGGGTTCCGAATCATACCTCCTTaGACTGGCCGGTTCATGGCACTGGTGGTAGCAGCA +
Preference number: 6 (lower is better)
Translates to: GMLAAGFRIIPP*TGRFMALVVAA
Trigger: TGCTGCTACCACCAGTGCCATGAACCGGCCAGTCCAAGGAGGTATGATTCGGAACCCAGCAGCCAGCATCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000518363.2
CDS CAA 72 bp AAATCGACACCCGGCAGGTCAGCTCCCTGCCTTCGATaGGCTCACTGCCCCATCAGTCAGACGCACCGAGAT +
Preference number: 6 (lower is better)
Translates to: KSTPGRSAPCLR*AHCPISQTHRD
Trigger: ATCTCGGTGCGTCTGACTGATGGGGCAGTGAGCCAATCGAAGGCAGGGAGCTGACCTGCCGGGTGTCGATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520416.1
CDS CAA 90 bp CTCACTGCTCACGGCCGGGGGCAGGTTGGGGTCATTTGTTTCCTTTaGCTCTCCAGGATGGCAGCTGCTCTCTGCTTGTCCAGTTGTACC +
Preference number: 6 (lower is better)
Translates to: LTAHGRGQVGVICFL*LSRMAAALCLSSCT
Trigger: GGTACAACTGGACAAGCAGAGAGCAGCTGCCATCCTGGAGAGCAAAAGGAAACAAATGACCCCAACCTGCCCCCGGCCGTGAGCAGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000524223.1
CDS GCA 72 bp AGCAGCACAGGTGACTCTCACAGCCGAACTCTGCGGTaGCCATTCTCCAGATGGCATAGTAGGCCGAGAAGC +
Preference number: 6 (lower is better)
Translates to: SSTGDSHSRTLR*PFSRWHSRPRS
Trigger: GCTTCTCGGCCTACTATGCCATCTGGAGAATGGGCACCGCAGAGTTCGGCTGTGAGAGTCACCTGTGCTGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000518363.2
CDS GCA 72 bp ATCCAAGAGAAATCGACACCCGGCAGGTCAGCTCCCTaGCTTCGATTGGCTCACTGCCCCATCAGTCAGACG +
Preference number: 6 (lower is better)
Translates to: IQEKSTPGRSAP*LRLAHCPISQT
Trigger: CGTCTGACTGATGGGGCAGTGAGCCAATCGAAGGCAGGGAGCTGACCTGCCGGGTGTCGATTTCTCTTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520416.1
CDS CCA 72 bp CAGGGCTCATGCGATGCCTTGGTGAAAGCATGGAGGTaGGCTGTCCTGGATTCATGCCAGGGCTGCTTTGTG +
Preference number: 6 (lower is better)
Translates to: QGSCDALVKAWR*AVLDSCQGCFV
Trigger: CACAAAGCAGCCCTGGCATGAATCCAGGACAGCCCACCTCCATGCTTTCACCAAGGCATCGCATGAGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS CAA 72 bp TTGGTGGTCAGCAGCTGCAGGAGTTTGGTCTGCCCTTaGCTGTCATGCAGTCTGCTCTGCCCGTCAGCTCTC +
Preference number: 6 (lower is better)
Translates to: LVVSSCRSLVCP*LSCSLLCPSAL
Trigger: GAGAGCTGACGGGCAGAGCAGACTGCATGACAGCAAAGGGCAGACCAAACTCCTGCAGCTGCTGACCACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000524223.1
CDS CAA 72 bp CCAGGAGCTGTGCTGCTGGACTCCTGGCTCAGGTCTTaGCCTGTGGCTTCTGCTGTTAACTTGGCCAAGTCC +
Preference number: 6 (lower is better)
Translates to: PGAVLLDSWLRS*PVASAVNLAKS
Trigger: GGACTTGGCCAAGTTAACAGCAGAAGCCACAGGCAAAGACCTGAGCCAGGAGTCCAGCAGCACAGCTCCTGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000524223.1
CDS CAA 72 bp GGTGGCGGAGGAAGGTGTTCAGGCTCGGTCTCTGGTTaGGGAAAGTTTCCCCTACCAGTGACGGACCCAGAA +
Preference number: 6 (lower is better)
Translates to: GGGGRCSGSVSG*GKFPLPVTDPE
Trigger: TTCTGGGTCCGTCACTGGTAGGGGAAACTTTCCCAAACCAGAGACCGAGCCTGAACACCTTCCTCCGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520416.1
CDS CAA 90 bp CTGGACTCCTGGCTCAGGTCTTTGCCTGTGGCTTCTGCTGTTAACTaGGCCAAGTCCACAGGGGAACTGCTGTCCTGCAAGAGTCTGTGC +
Preference number: 6 (lower is better)
Translates to: LDSWLRSLPVASAVN*AKSTGELLSCKSLC
Trigger: GCACAGACTCTTGCAGGACAGCAGTTCCCCTGTGGACTTGGCCAAGTTAACAGCAGAAGCCACAGGCAAAGACCTGAGCCAGGAGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000524223.1
CDS TCA 72 bp TCCGACAAAGAGCTGGCTAAGGGCGAGGGCTCCATCTaGTCAGATTTGGTGGTCAGCAGCTGCAGGAGTTTG +
Preference number: 6 (lower is better)
Translates to: SDKELAKGEGSI*SDLVVSSCRSL
Trigger: CAAACTCCTGCAGCTGCTGACCACCAAATCTGATCAGATGGAGCCCTCGCCCTTAGCCAGCTCTTTGTCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000524223.1
CDS TCA 72 bp CTTGGGGCTCACCGGCTCTTGTTTAATAGTCACTTCTaGTCCAGGAGCTGTGCTGCTGGACTCCTGGCTCAG +
Preference number: 6 (lower is better)
Translates to: LGAHRLLFNSHF*SRSCAAGLLAQ
Trigger: CTGAGCCAGGAGTCCAGCAGCACAGCTCCTGGATCAGAAGTGACTATTAAACAAGAGCCGGTGAGCCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000524223.1
CDS TCA 72 bp TTGCATGAGGTCATTGATGATGGCTTGCTTGTCAACTaGTCCAGCAGGGGCGCCTGGCCTCGTGTCTGGGAA +
Preference number: 6 (lower is better)
Translates to: LHEVIDDGLLVN*SSRGAWPRVWE
Trigger: TTCCCAGACACGAGGCCAGGCGCCCCTGCTGGATCAGTTGACAAGCAAGCCATCATCAATGACCTCATGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000518363.2
CDS CCA 72 bp GGCTCAGGTCTTTGCCTGTGGCTTCTGCTGTTAACTTaGCCAAGTCCACAGGGGAACTGCTGTCCTGCAAGA +
Preference number: 6 (lower is better)
Translates to: GSGLCLWLLLLT*PSPQGNCCPAR
Trigger: TCTTGCAGGACAGCAGTTCCCCTGTGGACTTGGCCAAGTTAACAGCAGAAGCCACAGGCAAAGACCTGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000524223.1
CDS CAA 72 bp TGGCTCAGGTCTTTGCCTGTGGCTTCTGCTGTTAACTaGGCCAAGTCCACAGGGGAACTGCTGTCCTGCAAG +
Preference number: 6 (lower is better)
Translates to: WLRSLPVASAVN*AKSTGELLSCK
Trigger: CTTGCAGGACAGCAGTTCCCCTGTGGACTTGGCCAAGTTAACAGCAGAAGCCACAGGCAAAGACCTGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000524223.1
CDS TCA 72 bp TTAGCCAGATTCATCTGGGAGCCATGCAAAGAGCTGTaGGAGAGGAGCTGTGACCCAACACTGGGGGACACT +
Preference number: 6 (lower is better)
Translates to: LARFIWEPCKEL*ERSCDPTLGDT
Trigger: AGTGTCCCCCAGTGTTGGGTCACAGCTCCTCTCTCACAGCTCTTTGCATGGCTCCCAGATGAATCTGGCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521239.1
CDS GCA 72 bp CTGACACATGGTTCATTCCCCCAGAACCACCAAACCTaGCCATGGGCATGCCCATTTGTTCCTTTGGGCCAT +
Preference number: 6 (lower is better)
Translates to: LTHGSFPQNHQT*PWACPFVPLGH
Trigger: ATGGCCCAAAGGAACAAATGGGCATGCCCATGGGCAGGTTTGGTGGTTCTGGGGGAATGAACCATGTGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS CAA 72 bp GCTCTCCAGGATGGCAGCTGCTCTCTGCTTGTCCAGTaGTACCTTCAGAGGGCTCCCCATATAGTCCAAAAC +
Preference number: 6 (lower is better)
Translates to: ALQDGSCSLLVQ*YLQRAPHIVQN
Trigger: GTTTTGGACTATATGGGGAGCCCTCTGAAGGTACAACTGGACAAGCAGAGAGCAGCTGCCATCCTGGAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000524223.1
CDS CAA 72 bp ACCCAGAACCAGGCAAGCTACCTGTGGAGTCTTTGTTaGTATCCGACAAAGAGCTGGCTAAGGGCGAGGGCT +
Preference number: 6 (lower is better)
Translates to: TQNQASYLWSLC*YPTKSWLRARA
Trigger: AGCCCTCGCCCTTAGCCAGCTCTTTGTCGGATACAAACAAAGACTCCACAGGTAGCTTGCCTGGTTCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000524223.1
CDS CAA 90 bp GTTCCATGTGTAGACCCAGAACCAGGCAAGCTACCTGTGGAGTCTTaGTTTGTATCCGACAAAGAGCTGGCTAAGGGCGAGGGCTCCATC +
Preference number: 6 (lower is better)
Translates to: VPCVDPEPGKLPVES*FVSDKELAKGEGSI
Trigger: GATGGAGCCCTCGCCCTTAGCCAGCTCTTTGTCGGATACAAACAAAGACTCCACAGGTAGCTTGCCTGGTTCTGGGTCTACACATGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000524223.1
CDS GCA 72 bp AAGTTGGTCAGGACATTCCTTGCGCTTTCTTGTCTCTaGCCTGGAGGGGTCAGAGGTATTTTCTCCCATCCC +
Preference number: 6 (lower is better)
Translates to: KLVRTFLALSCL*PGGVRGIFSHP
Trigger: GGGATGGGAGAAAATACCTCTGACCCCTCCAGGGCAGAGACAAGAAAGCGCAAGGAATGTCCTGACCAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS GCA 72 bp ATCATAGGCCCCAGCGCATCCTTGTCGATGACACCCTaGCCTGTAGAGGATACATCTGACTTCTGCACTTCA +
Preference number: 6 (lower is better)
Translates to: IIGPSASLSMTP*PVEDTSDFCTS
Trigger: TGAAGTGCAGAAGTCAGATGTATCCTCTACAGGGCAGGGTGTCATCGACAAGGATGCGCTGGGGCCTATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS GCA 72 bp TGTTTCCTTTTGCTCTCCAGGATGGCAGCTGCTCTCTaGTTGTCCAGTTGTACCTTCAGAGGGCTCCCCATA +
Preference number: 6 (lower is better)
Translates to: CFLLLSRMAAAL*LSSCTFRGLPI
Trigger: TATGGGGAGCCCTCTGAAGGTACAACTGGACAAGCAGAGAGCAGCTGCCATCCTGGAGAGCAAAAGGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000524223.1
CDS CCA 72 bp CTTCTGAATACACCTTCTTACCAGGTCCTCCCAGCCTaGTTTCATGGCTGCTCTCATGGTGCTGGTATCCAG +
Preference number: 6 (lower is better)
Translates to: LLNTPSYQVLPA*FHGCSHGAGIQ
Trigger: CTGGATACCAGCACCATGAGAGCAGCCATGAAACCAGGCTGGGAGGACCTGGTAAGAAGGTGTATTCAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS CCA 72 bp CATGGTTCATTCCCCCAGAACCACCAAACCTGCCCATaGGCATGCCCATTTGTTCCTTTGGGCCATTTATGG +
Preference number: 6 (lower is better)
Translates to: HGSFPQNHQTCP*ACPFVPLGHLW
Trigger: CCATAAATGGCCCAAAGGAACAAATGGGCATGCCCATGGGCAGGTTTGGTGGTTCTGGGGGAATGAACCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS CCA 72 bp TCTCACAGCCGAACTCTGCGGTGCCCATTCTCCAGATaGCATAGTAGGCCGAGAAGCACTGTTACCAATCAT +
Preference number: 6 (lower is better)
Translates to: SHSRTLRCPFSR*HSRPRSTVTNH
Trigger: ATGATTGGTAACAGTGCTTCTCGGCCTACTATGCCATCTGGAGAATGGGCACCGCAGAGTTCGGCTGTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000518363.2
CDS CAA 72 bp GTAGACCCAGAACCAGGCAAGCTACCTGTGGAGTCTTaGTTTGTATCCGACAAAGAGCTGGCTAAGGGCGAG +
Preference number: 6 (lower is better)
Translates to: VDPEPGKLPVES*FVSDKELAKGE
Trigger: CTCGCCCTTAGCCAGCTCTTTGTCGGATACAAACAAAGACTCCACAGGTAGCTTGCCTGGTTCTGGGTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000524223.1
CDS CAA 90 bp CCCTCCTCTTCTGAATCAGGTAAAGGTTTTACCAGCATCCGACAATaGAAGGTATGGCTGTTCCGCCTCGGAGGTTCGCCAGACCAAGAT +
Preference number: 6 (lower is better)
Translates to: PSSSESGKGFTSIRQ*KVWLFRLGGSPDQD
Trigger: ATCTTGGTCTGGCGAACCTCCGAGGCGGAACAGCCATACCTTCAATTGTCGGATGCTGGTAAAACCTTTACCTGATTCAGAAGAGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS TCA 72 bp CTGAATCAGGTAAAGGTTTTACCAGCATCCGACAATTaGAGGTATGGCTGTTCCGCCTCGGAGGTTCGCCAG +
Preference number: 6 (lower is better)
Translates to: LNQVKVLPASDN*RYGCSASEVRQ
Trigger: CTGGCGAACCTCCGAGGCGGAACAGCCATACCTTCAATTGTCGGATGCTGGTAAAACCTTTACCTGATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS TCA 72 bp GACACAGATTCTCCTTCATGCTGCGCATGGAACTTCTaGATACACCTTCTTACCAGGTCCTCCCAGCCTGGT +
Preference number: 6 (lower is better)
Translates to: DTDSPSCCAWNF*IHLLTRSSQPG
Trigger: ACCAGGCTGGGAGGACCTGGTAAGAAGGTGTATTCAGAAGTTCCATGCGCAGCATGAAGGAGAATCTGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS TCA 72 bp CTGGCTGAGGTATCACTGAGTAGGGACTACTGTTTCTaGTTGGTGGGAAAGGTCCAGCACCAGTTGGGCTTT +
Preference number: 6 (lower is better)
Translates to: LAEVSLSRDYCF*LVGKVQHQLGF
Trigger: AAAGCCCAACTGGTGCTGGACCTTTCCCACCAATCAGAAACAGTAGTCCCTACTCAGTGATACCTCAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS GCA 72 bp GTGCATAGTTACTACCCTGAGGAGTGGTTGCTTGCATaGCTGACACATGGTTCATTCCCCCAGAACCACCAA +
Preference number: 6 (lower is better)
Translates to: VHSYYPEEWLLA*LTHGSFPQNHQ
Trigger: TTGGTGGTTCTGGGGGAATGAACCATGTGTCAGGCATGCAAGCAACCACTCCTCAGGGTAGTAACTATGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS CCA 72 bp GGTAAAGGTTTTACCAGCATCCGACAATTGAAGGTATaGCTGTTCCGCCTCGGAGGTTCGCCAGACCAAGAT +
Preference number: 6 (lower is better)
Translates to: GKGFTSIRQLKV*LFRLGGSPDQD
Trigger: ATCTTGGTCTGGCGAACCTCCGAGGCGGAACAGCCATACCTTCAATTGTCGGATGCTGGTAAAACCTTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS CCA 72 bp CTGATGGGCAGGGCTGTTAGAGCTAATTGGATTCAGTaGCTTCCCCATCGTTTGTCCAGTCAGATCCGGATT +
Preference number: 6 (lower is better)
Translates to: LMGRAVRANWIQ*LPHRLSSQIRI
Trigger: AATCCGGATCTGACTGGACAAACGATGGGGAAGCCACTGAATCCAATTAGCTCTAACAGCCCTGCCCATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS CCA 72 bp CTCCTGCTTAATCATATCCATTCCAGGCAGCTGGTTTaGGAACAGGTTGCCTCCCCTCAGAGCAGGATCATT +
Preference number: 6 (lower is better)
Translates to: LLLNHIHSRQLV*EQVASPQSRII
Trigger: AATGATCCTGCTCTGAGGGGAGGCAACCTGTTCCCAAACCAGCTGCCTGGAATGGATATGATTAAGCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518363.2
CDS CCA 72 bp TGGGGATCTAAGTCCAGTACCGTAGTTTGGAGGAAATaGAAACTGCTGTGCATTTGCCTGGGGAATCCGAGG +
Preference number: 6 (lower is better)
Translates to: WGSKSSTVVWRK*KLLCICLGNPR
Trigger: CCTCGGATTCCCCAGGCAAATGCACAGCAGTTTCCATTTCCTCCAAACTACGGTACTGGACTTAGATCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521239.1
CDS CCA 72 bp GAAAGGTGGTGGGGATCTAAGTCCAGTACCGTAGTTTaGAGGAAATGGAAACTGCTGTGCATTTGCCTGGGG +
Preference number: 6 (lower is better)
Translates to: ERWWGSKSSTVV*RKWKLLCICLG
Trigger: CCCCAGGCAAATGCACAGCAGTTTCCATTTCCTCCAAACTACGGTACTGGACTTAGATCCCCACCACCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521239.1
CDS CAA 90 bp GGCAGGGCTGTTAGAGCTAATTGGATTCAGTGGCTTCCCCATCGTTaGTCCAGTCAGATCCGGATTCATCACACACACATTCTGCTCTCT +
Preference number: 6 (lower is better)
Translates to: GRAVRANWIQWLPHR*SSQIRIHHTHILLS
Trigger: AGAGAGCAGAATGTGTGTGTGATGAATCCGGATCTGACTGGACAAACGATGGGGAAGCCACTGAATCCAATTAGCTCTAACAGCCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS TCA 72 bp TCATGCCAGGGCTGCTTTGTGAGGGGCTGTTCATTTTaGGTGCATAGTTACTACCCTGAGGAGTGGTTGCTT +
Preference number: 6 (lower is better)
Translates to: SCQGCFVRGCSF*VHSYYPEEWLL
Trigger: AAGCAACCACTCCTCAGGGTAGTAACTATGCACTCAAAATGAACAGCCCCTCACAAAGCAGCCCTGGCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS CCA 72 bp TACCTGTGGAGTCTTTGTTTGTATCCGACAAAGAGCTaGCTAAGGGCGAGGGCTCCATCTGATCAGATTTGG +
Preference number: 6 (lower is better)
Translates to: YLWSLCLYPTKS*LRARAPSDQIW
Trigger: CCAAATCTGATCAGATGGAGCCCTCGCCCTTAGCCAGCTCTTTGTCGGATACAAACAAAGACTCCACAGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000524223.1
CDS CAA 72 bp TCTGAATCAGGTAAAGGTTTTACCAGCATCCGACAATaGAAGGTATGGCTGTTCCGCCTCGGAGGTTCGCCA +
Preference number: 6 (lower is better)
Translates to: SESGKGFTSIRQ*KVWLFRLGGSP
Trigger: TGGCGAACCTCCGAGGCGGAACAGCCATACCTTCAATTGTCGGATGCTGGTAAAACCTTTACCTGATTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS CAA 90 bp GAACTGCTGTCCTGCAAGAGTCTGTGCAAAATTTTATGCTTCTCCTaGAGCGAGGTTCCATGTGTAGACCCAGAACCAGGCAAGCTACCT +
Preference number: 6 (lower is better)
Translates to: ELLSCKSLCKILCFS*SEVPCVDPEPGKLP
Trigger: AGGTAGCTTGCCTGGTTCTGGGTCTACACATGGAACCTCGCTCAAGGAGAAGCATAAAATTTTGCACAGACTCTTGCAGGACAGCAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000524223.1
CDS TCA 72 bp GCGCCTGGCCTCGTGTCTGGGAAAAGCTGTGGTAATTaGCTATTCTGCAAATCATCCAAAATCTCCTCCAAG +
Preference number: 6 (lower is better)
Translates to: APGLVSGKSCGN*LFCKSSKISSK
Trigger: CTTGGAGGAGATTTTGGATGATTTGCAGAATAGTCAATTACCACAGCTTTTCCCAGACACGAGGCCAGGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS TCA 72 bp CCCTTGATTACCCATCATTCCTGGCTGAGGTATCACTaGGTAGGGACTACTGTTTCTGATTGGTGGGAAAGG +
Preference number: 6 (lower is better)
Translates to: PLITHHSWLRYH*VGTTVSDWWER
Trigger: CCTTTCCCACCAATCAGAAACAGTAGTCCCTACTCAGTGATACCTCAGCCAGGAATGATGGGTAATCAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS GCA 72 bp CTGATTGGTGGGAAAGGTCCAGCACCAGTTGGGCTTTaGAATGTGATGTCAAGTGGTAAATTCTGGTTTGGC +
Preference number: 6 (lower is better)
Translates to: LIGGKGPAPVGL*NVMSSGKFWFG
Trigger: GCCAAACCAGAATTTACCACTTGACATCACATTGCAAAGCCCAACTGGTGCTGGACCTTTCCCACCAATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS CCA 72 bp GTTGGGCTTTGCAATGTGATGTCAAGTGGTAAATTCTaGTTTGGCAATAACCTGCCCAGTTGCCCTGGTCGT +
Preference number: 6 (lower is better)
Translates to: VGLCNVMSSGKF*FGNNLPSCPGR
Trigger: ACGACCAGGGCAACTGGGCAGGTTATTGCCAAACCAGAATTTACCACTTGACATCACATTGCAAAGCCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452400.7
CDS CAA 72 bp TCCTGCAAGAGTCTGTGCAAAATTTTATGCTTCTCCTaGAGCGAGGTTCCATGTGTAGACCCAGAACCAGGC +
Preference number: 6 (lower is better)
Translates to: SCKSLCKILCFS*SEVPCVDPEPG
Trigger: GCCTGGTTCTGGGTCTACACATGGAACCTCGCTCAAGGAGAAGCATAAAATTTTGCACAGACTCTTGCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000524223.1
CDS CAA 90 bp GTTCATTCCCCCAGAACCACCAAACCTGCCCATGGGCATGCCCATTaGTTCCTTTGGGCCATTTATGGGAAAATTTATATTGCTACTGAG +
Preference number: 6 (lower is better)
Translates to: VHSPRTTKPAHGHAH*FLWAIYGKIYIATE
Trigger: CTCAGTAGCAATATAAATTTTCCCATAAATGGCCCAAAGGAACAAATGGGCATGCCCATGGGCAGGTTTGGTGGTTCTGGGGGAATGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS GCA 72 bp GAACTGCTGTCCTGCAAGAGTCTGTGCAAAATTTTATaGTTCTCCTTGAGCGAGGTTCCATGTGTAGACCCA +
Preference number: 6 (lower is better)
Translates to: ELLSCKSLCKIL*FSLSEVPCVDP
Trigger: TGGGTCTACACATGGAACCTCGCTCAAGGAGAAGCATAAAATTTTGCACAGACTCTTGCAGGACAGCAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000524223.1
CDS TCA 72 bp TTCATCTCTAATTCAGATGGCCCTTACCTATATTCATaGCCTGAGACTGAAGCGTCTGTCTTTGGCCAGGCT +
Preference number: 6 (lower is better)
Translates to: FISNSDGPYLYS*PETEASVFGQA
Trigger: AGCCTGGCCAAAGACAGACGCTTCAGTCTCAGGTCATGAATATAGGTAAGGGCCATCTGAATTAGAGATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518287.6
CDS CAA 90 bp GCTGGTCACCAGGCTCAAAGCTCATCTCCTCCTTCTCAGTTTTCATaGCTATTAATTTTGTGTTACTGGCAGGATCTGTCTTACTGTCCA +
Preference number: 6 (lower is better)
Translates to: AGHQAQSSSPPSQFS*LLILCYWQDLSYCP
Trigger: TGGACAGTAAGACAGATCCTGCCAGTAACACAAAATTAATAGCAATGAAAACTGAGAAGGAGGAGATGAGCTTTGAGCCTGGTGACCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS TCA 72 bp CCAACATTACATCTTGATGTAAACCTAAGCACATGCTaGGCACCCCGCCGCTTATCTCCTCTATCATTTGTT +
Preference number: 6 (lower is better)
Translates to: PTLHLDVNLSTC*APRRLSPLSFV
Trigger: AACAAATGATAGAGGAGATAAGCGGCGGGGTGCTCAGCATGTGCTTAGGTTTACATCAAGATGTAATGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519724.1
CDS CCA 72 bp GGACTGCAAATCTTCTCCTTCTTCTTTGATGGACTTTaGTTGAGAGACAGCGAAGCACTGCATAGTTTCATA +
Preference number: 6 (lower is better)
Translates to: GLQIFSFFFDGL*LRDSEALHSFI
Trigger: TATGAAACTATGCAGTGCTTCGCTGTCTCTCAACCAAAGTCCATCAAAGAAGAAGGAGAAGATTTGCAGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS CAA 90 bp TTGTGCAGCAACAAGAGTGCCATCAGACAAGGAAAAACGATAGATTaGACTGAATGCCAATCCTTGTCTCAGTACTTCATGATGATGCCT +
Preference number: 6 (lower is better)
Translates to: LCSNKSAIRQGKTID*TECQSLSQYFMMMP
Trigger: AGGCATCATCATGAAGTACTGAGACAAGGATTGGCATTCAGTCAAATCTATCGTTTTTCCTTGTCTGATGGCACTCTTGTTGCTGCACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS CAA 90 bp TTGAGGTTCATTAGTAGTCTGAGAACGGATGAGTTTGCTCTTCGTTaGTGCAGCAACAAGAGTGCCATCAGACAAGGAAAAACGATAGAT +
Preference number: 6 (lower is better)
Translates to: LRFISSLRTDEFALR*CSNKSAIRQGKTID
Trigger: ATCTATCGTTTTTCCTTGTCTGATGGCACTCTTGTTGCTGCACAAACGAAGAGCAAACTCATCCGTTCTCAGACTACTAATGAACCTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452400.7
ENST00000518287.6
CDS CAA 72 bp CTGGCAGGATCTGTCTTACTGTCCAGTCTCTCAAGTTaGGGGGTTATTTCTGGTAAACCAATATCTTTAGTA +
Preference number: 6 (lower is better)
Translates to: LAGSVLLSSLSS*GVISGKPISLV
Trigger: TACTAAAGATATTGGTTTACCAGAAATAACCCCCAAACTTGAGAGACTGGACAGTAAGACAGATCCTGCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452400.7
ENST00000518287.6
ENST00000524223.1