RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NCOA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000084676

Ensembl transcript IDs: ENST00000288599.9, ENST00000348332.7, ENST00000348332.8, ENST00000395856.3, ENST00000405141.5, ENST00000406961.5, ENST00000407230.5, ENST00000469850.5, ENST00000483904.5, ENST00000486198.1, ENST00000493773.1, ENST00000496333.5

Found 1392 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTTTGGTGGACGGGCACAGGCAAAGCCCCACGGGCCCTTCTTCCTaGGCAGGGTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCT +
Preference number: 1 (lower is better)
Translates to: PLVDGHRQSPTGPSS*AGLGLSGGGGASSS
Trigger: AGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAACCCTGCCCAGGAAGAAGGGCCCGTGGGGCTTTGCCTGTGCCCGTCCACCAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR CCA 90 bp GGGATGGGGAGGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTaGACGGGCACAGGCAAAGCCCCACGGGCCCTTCTTCCTGGGCAG +
Preference number: 1 (lower is better)
Translates to: GMGRAADFETHDSLW*TGTGKAPRALLPGQ
Trigger: CTGCCCAGGAAGAAGGGCCCGTGGGGCTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCCTCCCCATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR CCA 90 bp ATTGGGATGGGGAGGGCTGCTGATTTCGAGACACATGACAGCCTTTaGTGGACGGGCACAGGCAAAGCCCCACGGGCCCTTCTTCCTGGG +
Preference number: 1 (lower is better)
Translates to: IGMGRAADFETHDSL*WTGTGKAPRALLPG
Trigger: CCCAGGAAGAAGGGCCCGTGGGGCTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCCTCCCCATCCCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR CCA 90 bp GCAGGGTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTaGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGAT +
Preference number: 1 (lower is better)
Translates to: AGLGLSGGGGASSSS*NLSFWFSSKSLHPD
Trigger: ATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAACCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR CCA 90 bp TTGCTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATaGGGAGGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGA +
Preference number: 1 (lower is better)
Translates to: LLEKLIVHTSCLGLG*GGLLISRHMTAFGG
Trigger: TCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR CCA 90 bp AGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTTTaGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACT +
Preference number: 1 (lower is better)
Translates to: SGGGGASSSSWNLSF*FSSKSLHPDKKPMT
Trigger: AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR TCA 90 bp TATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTTTaGTTTGAACCCCAAAGTAAATCCATACATGACATCACAGTTATT +
Preference number: 1 (lower is better)
Translates to: YALDQLEQLFLAVTF*FEPQSKSIHDITVI
Trigger: AATAACTGTGATGTCATGTATGGATTTACTTTGGGGTTCAAATCAAAATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR CAA 90 bp GACGGGCACAGGCAAAGCCCCACGGGCCCTTCTTCCTGGGCAGGGTaGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAAC +
Preference number: 2 (lower is better)
Translates to: DGHRQSPTGPSSWAG*GLSGGGGASSSSWN
Trigger: GTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAACCCTGCCCAGGAAGAAGGGCCCGTGGGGCTTTGCCTGTGCCCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR-3UTR TCA 90 bp TCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACGTCAGCAAACACCTaGACCTGTTGCACCTGTAGA +
Preference number: 2 (lower is better)
Translates to: SQWTRLVQVRVPAYQIHCTSANT*TCCTCR
Trigger: TCTACAGGTGCAACAGGTTCAGGTGTTTGCTGACGT...ACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
3UTR-3UTR TCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTCCTGACGTGGGCTTTTaGGTTCCCAGTGGACCAGGC +
Preference number: 2 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSPDVGF*VPSGPG
Trigger: GCCTGGTCCACTGGGAACTCAAAAGCCCACGTCAGG...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
3UTR-3UTR TCA 90 bp GAGTTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCAACGTCAGCAAACACCTaGACCTGTTGCACTAGAGCA +
Preference number: 2 (lower is better)
Translates to: EFPVDQAGSGKGPRLPDSTSANT*TCCTRA
Trigger: TGCTCTAGTGCAACAGGTTCAGGTGTTTGCTGACGT...TGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407230.5
3UTR-3UTR CCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTACGGGCCCTTCTTCCTaGGCAGGGTTGGGACTAAGC +
Preference number: 2 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSTGPSS*AGLGLS
Trigger: GCTTAGTCCCAACCCTGCCCAGGAAGAAGGGCCCGT...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR-3UTR CCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTTACACACAAGCTGCCTaGGATTGGGATGGGGAGGGC +
Preference number: 2 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSYTQAA*DWDGEG
Trigger: GCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTA...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR-3UTR TCA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCATCAGTCAGTAGCTGCTaGAGGAGGCTCTTCTGCTGG +
Preference number: 2 (lower is better)
Translates to: RDTLGQYALDQLEQLFLASVSSC*RRLFCW
Trigger: CCAGCAGAAGAGCCTCCTTCAGCAGCTACTGACTGA...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
3UTR-3UTR CCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTTCTGTGGTCCTGACGTaGGCTTTTGAGTTCCCAGTG +
Preference number: 2 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVSVVLT*AFEFPV
Trigger: CACTGGGAACTCAAAAGCCCACGTCAGGACCACAGA...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
3UTR-3UTR CCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTTGCCTGGGATTGGGATaGGGAGGGCTGCTGATTTCG +
Preference number: 2 (lower is better)
Translates to: SRAVCSRSAGTALSGSDICLGLG*GGLLIS
Trigger: CGAAATCAGCAGCCCTCCCCATCCCAATCCCAGGCA...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR-3UTR GCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTATTGTACACACAAGCTaGCTGGGATTGGGATGGGGA +
Preference number: 2 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSIVHTS*LGLGWG
Trigger: TCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAAT...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR CAA 90 bp TTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTaGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAG +
Preference number: 2 (lower is better)
Translates to: LGLSGGGGASSSSWN*SFWFSSKSLHPDKK
Trigger: CTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR-3UTR TCA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCGGGGGTCTGTGGTCCTaGCGTGGGCTTTTGAGTTCC +
Preference number: 2 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGGGLWS*RGLLSS
Trigger: GGAACTCAAAAGCCCACGTCAGGACCACAGACCCCC...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
3UTR-3UTR CCA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCACTACGACCTGAAGAATaGCTGCAGATTGAGATATCA +
Preference number: 2 (lower is better)
Translates to: RDTLGQYALDQLEQLFLALRPEE*LQIEIS
Trigger: TGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR-3UTR TCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCCCTGACGTGGGCTTTTaGGTTCCCAGTGGACCAGGC +
Preference number: 2 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGPDVGF*VPSGPG
Trigger: GCCTGGTCCACTGGGAACTCAAAAGCCCACGTCAGG...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
3UTR-3UTR TCA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGGCAAAATATTCTCTTaGAGCCAACAGATACAGAGT +
Preference number: 2 (lower is better)
Translates to: RDTLGQYALDQLEQLFLAGKIFS*SQQIQS
Trigger: ACTCTGTATCTGTTGGCTTCAAGAGAATATTTTGCC...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR-3UTR CCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGCTTCATCTTCTTCTTaGAACTTGTCGTTTTGGTTC +
Preference number: 2 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSASSSS*NLSFWF
Trigger: GAACCAAAACGACAAGTTCCAAGAAGAAGATGAAGC...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR-3UTR CCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTACATGACAGCCTTTGGTaGACGGGCACAGGCAAAGCC +
Preference number: 2 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLHDSLW*TGTGKA
Trigger: GGCTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATG...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR CAA 90 bp CATATGTGGAGGCAAAATATTCTCTTGAAGCCAACAGATACAGAGTaGCTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGA +
Preference number: 2 (lower is better)
Translates to: HMWRQNILLKPTDTE*LEKLIVHTSCLGLG
Trigger: TCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAGCAACTCTGTATCTGTTGGCTTCAAGAGAATATTTTGCCTCCACATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR-3UTR CCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTTTCCTGGAGGCATCTTaGTTTAAATCCATCTTTAAA +
Preference number: 2 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSFLEAS*FKSIFK
Trigger: TTTAAAGATGGATTTAAACCAAGATGCCTCCAGGAA...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR-3UTR TCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTAGAATGGCTGCAGATTaGGATATCAAAAATCTCAGA +
Preference number: 2 (lower is better)
Translates to: SRAVCSRSAGTALSGSDIRMAAD*DIKNLR
Trigger: TCTGAGATTTTTGATATCTCAATCTGCAGCCATTCT...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR-3UTR CCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTATCTGTGGTCCTGACGTaGGCTTTTGAGTTCCCAGTG +
Preference number: 2 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLSVVLT*AFEFPV
Trigger: CACTGGGAACTCAAAAGCCCACGTCAGGACCACAGA...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
3UTR-3UTR TCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAAACGTCAGCAAACACCTaGACCTGTTGCACCTGTAGA +
Preference number: 2 (lower is better)
Translates to: MLRPEEWLQIEISKISEKTSANT*TCCTCR
Trigger: TCTACAGGTGCAACAGGTTCAGGTGTTTGCTGACGT...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
3UTR-3UTR GCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTAATTGTACACACAAGCTaGCTGGGATTGGGATGGGGA +
Preference number: 2 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLIVHTS*LGLGWG
Trigger: TCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAAT...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR-3UTR CCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATCTTTTGAGTTCCCAGTaGACCAGGCTGGTTCAGGTA +
Preference number: 2 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNLLSSQ*TRLVQV
Trigger: TACCTGAACCAGCCTGGTCCACTGGGAACTCAAAAG...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
3UTR-3UTR TCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCAGCTCTTTCTGGCAGTaGCATTTTGATTTGAACCCC +
Preference number: 2 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGSSFWQ*HFDLNP
Trigger: GGGGTTCAAATCAAAATGTCACTGCCAGAAAGAGCT...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR-3UTR CCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTACTACGACCTGAAGAATaGCTGCAGATTGAGATATCA +
Preference number: 2 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLLRPEE*LQIEIS
Trigger: TGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR-3UTR CCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCGCTTCATCTTCTTCTTaGAACTTGTCGTTTTGGTTC +
Preference number: 2 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGASSSS*NLSFWF
Trigger: GAACCAAAACGACAAGTTCCAAGAAGAAGATGAAGC...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR-3UTR TCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCAGAATGGCTGCAGATTaGGATATCAAAAATCTCAGA +
Preference number: 2 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGRMAAD*DIKNLR
Trigger: TCTGAGATTTTTGATATCTCAATCTGCAGCCATTCT...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR CAA 90 bp TTGGCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTaGGGCTTTGGCAATTTCTGCAGATGTACATTTCATTTCTTCCCT +
Preference number: 2 (lower is better)
Translates to: LASGMLYYPFIILVN*GFGNFCRCTFHFFP
Trigger: AGGGAAGAAATGAAATGTACATCTGCAGAAATTGCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGCCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR-3UTR CCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCTTCCTGGAGGCATCTTaGTTTAAATCCATCTTTAAA +
Preference number: 2 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGFLEAS*FKSIFK
Trigger: TTTAAAGATGGATTTAAACCAAGATGCCTCCAGGAA...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR CCA 72 bp GGGAGGGCTGCTGATTTCGAGACACATGACAGCCTTTaGTGGACGGGCACAGGCAAAGCCCCACGGGCCCTT +
Preference number: 3 (lower is better)
Translates to: GRAADFETHDSL*WTGTGKAPRAL
Trigger: AAGGGCCCGTGGGGCTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR CCA 72 bp AGGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTaGACGGGCACAGGCAAAGCCCCACGGGCCCTTCTT +
Preference number: 3 (lower is better)
Translates to: RAADFETHDSLW*TGTGKAPRALL
Trigger: AAGAAGGGCCCGTGGGGCTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR-3UTR CAA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTTCTTCCTGGGCAGGGTaGGGACTAAGCGGCGGAGGC +
Preference number: 3 (lower is better)
Translates to: SRAVCSRSAGTALSGSDISSWAG*GLSGGG
Trigger: GCCTCCGCCGCTTAGTCCCAACCCTGCCCAGGAAGA...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR CCA 72 bp AAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATaGGGAGGGCTGCTGATTTCGAGACACATGACAGCC +
Preference number: 3 (lower is better)
Translates to: KLIVHTSCLGLG*GGLLISRHMTA
Trigger: GGCTGTCATGTGTCTCGAAATCAGCAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR-3UTR CAA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGGGCTCAAGAAATAGATaGTCCAACTGTTCTGCCTTG +
Preference number: 3 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLGSRNR*SNCSAL
Trigger: CAAGGCAGAACAGTTGGACAATCTATTTCTTGAGCC...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR CCA 72 bp GGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTaGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTT +
Preference number: 3 (lower is better)
Translates to: GLSGGGGASSSS*NLSFWFSSKSL
Trigger: AAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR-3UTR CAA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCATCTTCTTCTTGGAACTaGTCGTTTTGGTTCTCCTCC +
Preference number: 3 (lower is better)
Translates to: RDTLGQYALDQLEQLFLASSSWN*SFWFSS
Trigger: GGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGA...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR-3UTR CAA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCTCTTCCTGGGCAGGGTaGGGACTAAGCGGCGGAGGC +
Preference number: 3 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGSSWAG*GLSGGG
Trigger: GCCTCCGCCGCTTAGTCCCAACCCTGCCCAGGAAGA...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR-3UTR CAA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTCCAACAGATACAGAGTaGCTAGAGAAGCTGATTGTA +
Preference number: 3 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSPTDTE*LEKLIV
Trigger: TACAATCAGCTTCTCTAGCAACTCTGTATCTGTTGG...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR-3UTR CAA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTTCTTCTTCTTGGAACTaGTCGTTTTGGTTCTCCTCC +
Preference number: 3 (lower is better)
Translates to: SRAVCSRSAGTALSGSDISSSWN*SFWFSS
Trigger: GGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGA...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR-3UTR CAA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTAGCTTCATCTTCTTCTaGGAACTTGTCGTTTTGGTT +
Preference number: 3 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSSFIFF*ELVVLV
Trigger: AACCAAAACGACAAGTTCCAAGAAGAAGATGAAGCT...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR CCA 72 bp GGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTTTaGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAG +
Preference number: 3 (lower is better)
Translates to: GGASSSSWNLSF*FSSKSLHPDKK
Trigger: CTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR-3UTR CAA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGGCTCAAGAAATAGATaGTCCAACTGTTCTGCCTTG +
Preference number: 3 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTGSRNR*SNCSAL
Trigger: CAAGGCAGAACAGTTGGACAATCTATTTCTTGAGCC...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR-3UTR CAA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCGACACAACTCACTTCTaGTCCTTCACCCATCTCATC +
Preference number: 3 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGDTTHF*SFTHLI
Trigger: GATGAGATGGGTGAAGGACAAGAAGTGAGTTGTGTC...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR-3UTR CAA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTATTGGAACTTGTCGTTTaGGTTCTCCTCCAAAAGCCT +
Preference number: 3 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLLELVV*VLLQKP
Trigger: AGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAA...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR-3UTR CAA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTACCAACAGATACAGAGTaGCTAGAGAAGCTGATTGTA +
Preference number: 3 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLPTDTE*LEKLIV
Trigger: TACAATCAGCTTCTCTAGCAACTCTGTATCTGTTGG...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGTGCTGTGGAGCACCCTaGGGAAGACGGGGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQCCGAP*GRRGFP
Trigger: GGGGAACCCCCGTCTTCCTCAGGGTGCTCCACAGCA...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GAGTTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCAGTTAGCAGGGTCGGATaGACTGTCCCCGAGGCCACT +
Preference number: 4 (lower is better)
Translates to: EFPVDQAGSGKGPRLPDSVSRVG*TVPEAT
Trigger: AGTGGCCTCGGGGACAGTTCATCCGACCCTGCTAAC...TGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGGTTAGCAGGGTCGGATaGACTGTCCCCGAGGCCACT +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLVSRVG*TVPEAT
Trigger: AGTGGCCTCGGGGACAGTTCATCCGACCCTGCTAAC...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GAGTTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGGCAGTGGCGGACTaGAGTGAAGCTGGCAGGATC +
Preference number: 4 (lower is better)
Translates to: EFPVDQAGSGKGPRLPDSLAVAD*SEAGRI
Trigger: GATCCTGCCAGCTTCACTTCAGTCCGCCACTGCCAG...TGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGCCTGGCAACTGTGCTaGCTTCTCCAGCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTAWQLC*LLQRGQ
Trigger: CTGCCCACGCTGGAGAAGGCAGCACAGTTGCCAGGC...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GAGTTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCAGCCTGGAAGTGGGTCTaGCAGTGGCGGACTGAAGTG +
Preference number: 4 (lower is better)
Translates to: EFPVDQAGSGKGPRLPDSAWKWV*QWRTEV
Trigger: CACTTCAGTCCGCCACTGCCAGACCCACTTCCAGGC...TGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGCTGGCTGTGCAGGCGTaGGCTGGTTCTGGACAGCTT +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLLAVQA*AGSGQL
Trigger: AAGCTGTCCAGAACCAGCCCACGCCTGCACAGCCAG...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GAGTTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACGGGGAGGTGTTACTTaGACAGGCATCGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: EFPVDQAGSGKGPRLPDSRGGVT*TGIVPS
Trigger: ACTGGGGACGATGCCTGTTCAAGTAACACCTCCCCG...TGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGGGCCTTCATGTCTGGTaGCTGATACCCGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQGLHVW*LIPGGR
Trigger: CCTGCCTCCGGGTATCAGTCACCAGACATGAAGGCC...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCCTGACGTGGGCTTTTaGGTTCCCAGTGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQPDVGF*VPSGPG
Trigger: GCCTGGTCCACTGGGAACTCAAAAGCCCACGTCAGG...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGGGGTCTGTGGTCCTaGCGTGGGCTTTTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTGGLWS*RGLLSS
Trigger: GGAACTCAAAAGCCCACGTCAGGACCACAGACCCCC...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GAGTTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCAGTATACTCCTGGCTGTaGAGGCGTGGGCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: EFPVDQAGSGKGPRLPDSVYSWL*RRGLVL
Trigger: CAGAACCAGCCCACGCCTGCACAGCCAGGAGTATAC...TGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTCGCTGGCAAGCTTCTTaGTTCTCGGTCCCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: SQWTRLVQVRVPAYQIHCRWQAS*FSVPGS
Trigger: TGAGCCAGGGACCGAGAACCAAGAAGCTTGCCAGCG...ACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGCGCTGGCAAGCTTCTTaGTTCTCGGTCCCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLRWQAS*FSVPGS
Trigger: TGAGCCAGGGACCGAGAACCAAGAAGCTTGCCAGCG...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGCCTGGAAGTGGGTCTaGCAGTGGCGGACTGAAGTG +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTAWKWV*QWRTEV
Trigger: CACTTCAGTCCGCCACTGCCAGACCCACTTCCAGGC...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCTGGCTGTGCAGGCGTaGGCTGGTTCTGGACAGCTT +
Preference number: 4 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQLAVQA*AGSGQL
Trigger: AAGCTGTCCAGAACCAGCCCACGCCTGCACAGCCAG...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTCATGACAGCCTTTGGTaGACGGGCACAGGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: SQWTRLVQVRVPAYQIHCHDSLW*TGTGKA
Trigger: GGCTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATG...ACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
CDS-3UTR TCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGGTTAGCAGGGTCGGATaGACTGTCCCCGAGGCCACT +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLVSRVG*TVPEAT
Trigger: AGTGGCCTCGGGGACAGTTCATCCGACCCTGCTAAC...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTCGGGGAGGTGTTACTTaGACAGGCATCGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTRGGVT*TGIVPS
Trigger: ACTGGGGACGATGCCTGTTCAAGTAACACCTCCCCG...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GAGTTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCATTCATGTCTGGTGACTaGTACCCGGAGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: EFPVDQAGSGKGPRLPDSFMSGD*YPEAGG
Trigger: TCCACCTGCCTCCGGGTATCAGTCACCAGACATGAA...TGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTTCATGTCTGGTGACTaGTACCCGGAGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLFMSGD*YPEAGG
Trigger: TCCACCTGCCTCCGGGTATCAGTCACCAGACATGAA...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGGGCCTTCATGTCTGGTaGCTGATACCCGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLGLHVW*LIPGGR
Trigger: CCTGCCTCCGGGTATCAGTCACCAGACATGAAGGCC...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp CAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAACACGGCCTTCATGTCTGGTaGCTGATACCCGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: QVRVPAYQIHCTLDVSKHGLHVW*LIPGGR
Trigger: CCTGCCTCCGGGTATCAGTCACCAGACATGAAGGCC...GTGTTTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAACCTGACGTGGGCTTTTaGGTTCCCAGTGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: GSGKGPRLPDSLYTGRQQPDVGF*VPSGPG
Trigger: GCCTGGTCCACTGGGAACTCAAAAGCCCACGTCAGG...TTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGCCTGACGTGGGCTTTTaGGTTCCCAGTGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLPDVGF*VPSGPG
Trigger: GCCTGGTCCACTGGGAACTCAAAAGCCCACGTCAGG...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAGGGGGTCTGTGGTCCTaGCGTGGGCTTTTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: GSGKGPRLPDSLYTGRQQGGLWS*RGLLSS
Trigger: GGAACTCAAAAGCCCACGTCAGGACCACAGACCCCC...TTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTCAGTCAGTAGCTGCTaGAGGAGGCTCTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLSVSSC*RRLFCW
Trigger: CCAGCAGAAGAGCCTCCTTCAGCAGCTACTGACTGA...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GAGTTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTTCCCAACCAGTTCTaGCAGCAGCTCTCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: EFPVDQAGSGKGPRLPDSLPNQF*QQLSGN
Trigger: GTTCCCTGAGAGCTGCTGGCAGAACTGGTTGGGAAG...TGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTAGGGGCTGGAGGCAGTaGCACGAGTCATCACTTCTT +
Preference number: 4 (lower is better)
Translates to: SQWTRLVQVRVPAYQIHCRGWRQ*HESSLL
Trigger: AAGAAGTGATGACTCGTGGCACTGCCTCCAGCCCCT...ACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGAGGGGCTGGAGGCAGTaGCACGAGTCATCACTTCTT +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLRGWRQ*HESSLL
Trigger: AAGAAGTGATGACTCGTGGCACTGCCTCCAGCCCCT...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGTGCCTCTGCTCACCATaGTGTTGCGGTTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKCLCSP*CCGWPR
Trigger: CCTTGGCCAACCGCAACAGCATGGTGAGCAGAGGCA...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTCATCTGCCTGAGGACTaGAGAACTGGCAGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: SQWTRLVQVRVPAYQIHCHLPED*RTGREA
Trigger: GGCTTCTCTGCCAGTTCTCCAGTCCTCAGGCAGATG...ACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTAAGTGGGTCTGGCAGTaGCGGACTGAAGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SQWTRLVQVRVPAYQIHCKWVWQ*RTEVKL
Trigger: CAGCTTCACTTCAGTCCGCCACTGCCAGACCCACTT...ACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTTTGGCATCGGCACCATaGAGCTCCCAGGGCTTAGAG +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTLASAP*SSQGLE
Trigger: CTCTAAGCCCTGGGAGCTCCATGGTGCCGATGCCAA...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACTGAGGAGGAGGGATTaGCATCGGCACCATGGAGCT +
Preference number: 4 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGLRRRD*HRHHGA
Trigger: AGCTCCATGGTGCCGATGCCAATCCCTCCTCCTCAG...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTCTGAGGAGGAGGGATTaGCATCGGCACCATGGAGCT +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTLRRRD*HRHHGA
Trigger: AGCTCCATGGTGCCGATGCCAATCCCTCCTCCTCAG...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGGTTGTTGTATACTCCTaGCTGTGCAGGCGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLVVVYS*LCRRGL
Trigger: CAGCCCACGCCTGCACAGCCAGGAGTATACAACAAC...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGCATGACAGCCTTTGGTaGACGGGCACAGGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKHDSLW*TGTGKA
Trigger: GGCTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATG...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTTGCCTGGGATTGGGATaGGGAGGGCTGCTGATTTCG +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTCLGLG*GGLLIS
Trigger: CGAAATCAGCAGCCCTCCCCATCCCAATCCCAGGCA...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
CDS-3UTR CCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGTACACACAAGCTGCCTaGGATTGGGATGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKYTQAA*DWDGEG
Trigger: GCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTA...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGCGTCGTGTTGCCTCTTaGGGCCAAGGAACTCCATTT +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLRRVAS*GQGTPF
Trigger: AAATGGAGTTCCTTGGCCTCAAGAGGCAACACGACG...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GAGTTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCAGAACGAGCCACACCATaGGCTGGAGAGATACTAGGA +
Preference number: 4 (lower is better)
Translates to: EFPVDQAGSGKGPRLPDSERATP*AGEILG
Trigger: TCCTAGTATCTCTCCAGCTCATGGTGTGGCTCGTTC...TGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGATGGTGGCAATGTGGATaGACGAGCCACACCATGAGC +
Preference number: 4 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGWWQCG*TSHTMS
Trigger: GCTCATGGTGTGGCTCGTTCATCCACATTGCCACCA...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGTGGTGGCAATGTGGATaGACGAGCCACACCATGAGC +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKWWQCG*TSHTMS
Trigger: GCTCATGGTGTGGCTCGTTCATCCACATTGCCACCA...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GAGTTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCAACATTGGCTACAATCTaGCTTCCGGGTGAGCATCCG +
Preference number: 4 (lower is better)
Translates to: EFPVDQAGSGKGPRLPDSTLATI*LPGEHP
Trigger: CGGATGCTCACCCGGAAGTCAGATTGTAGCCAATGT...TGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGGTGAGCTCATCTGCCTaGGGACTGGAGAACTGGCAG +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLVSSSA*GLENWQ
Trigger: CTGCCAGTTCTCCAGTCCTCAGGCAGATGAGCTCAC...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGAGGCATCGTCCCCAGTaGAGGTTTTTGCCTGACCAT +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLRHRPQ*RFLPDH
Trigger: ATGGTCAGGCAAAAACCTTCACTGGGGACGATGCCT...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGCGGGGAGGTGTTACTTaGACAGGCATCGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLRGGVT*TGIVPS
Trigger: ACTGGGGACGATGCCTGTTCAAGTAACACCTCCCCG...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGGGGGTTCCCCATTTaGACTGGTAGTCCAGATGAG +
Preference number: 4 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGRGFPI*TGSPDE
Trigger: CTCATCTGGACTACCAGTTCAAATGGGGAACCCCCG...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTCGGGGGTTCCCCATTTaGACTGGTAGTCCAGATGAG +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTRGFPI*TGSPDE
Trigger: CTCATCTGGACTACCAGTTCAAATGGGGAACCCCCG...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGTTCATGTCTGGTGACTaGTACCCGGAGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKFMSGD*YPEAGG
Trigger: TCCACCTGCCTCCGGGTATCAGTCACCAGACATGAA...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GAGTTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCAGCAGACAAAGGTGAGTaGTGGGGGTCTACCTTTGCT +
Preference number: 4 (lower is better)
Translates to: EFPVDQAGSGKGPRLPDSADKGE*WGSTFA
Trigger: AGCAAAGGTAGACCCCCATCACTCACCTTTGTCTGC...TGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
CDS-3UTR TCA 90 bp TCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTGGATGCAGACAAAGGTaGGTGATGGGGGTCTACCTT +
Preference number: 4 (lower is better)
Translates to: SQWTRLVQVRVPAYQIHCGCRQR*VMGVYL
Trigger: AAGGTAGACCCCCATCACTCACCTTTGTCTGCATCC...ACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
CDS-3UTR GCA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCTTCCCAACCAGTTCTaGCAGCAGCTCTCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQLPNQF*QQLSGN
Trigger: GTTCCCTGAGAGCTGCTGGCAGAACTGGTTGGGAAG...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGCCTGGCAACTGTGCTaGCTTCTCCAGCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RDTLGQYALDQLEQLFLAAWQLC*LLQRGQ
Trigger: CTGCCCACGCTGGAGAAGGCAGCACAGTTGCCAGGC...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTTGGGCTGCATGCCCATaGCAGGTGAAAAAGCACCTC +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTWAACP*QVKKHL
Trigger: GAGGTGCTTTTTCACCTGGCATGGGCATGCAGCCCA...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTTTGCCTGGGCTGCATaGCCATGCCAGGTGAAAAAG +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLFAWAA*PCQVKK
Trigger: CTTTTTCACCTGGCATGGGCATGCAGCCCAGGCAAA...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTAGAGTTTGCCTGGGCTaGATGCCCATGCCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTRVCLG*MPMPGE
Trigger: TTCACCTGGCATGGGCATGCAGCCCAGGCAAACTCT...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GAGTTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCAGGTCTGTTTAGAGTTTaGCTGGGCTGCATGCCCATG +
Preference number: 4 (lower is better)
Translates to: EFPVDQAGSGKGPRLPDSGLFRV*LGCMPM
Trigger: CATGGGCATGCAGCCCAGGCAAACTCTAAACAGACC...TGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GAGTTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCATTCCTGTCATGCCTCTaGTCACCATGCTGTTGCGGT +
Preference number: 4 (lower is better)
Translates to: EFPVDQAGSGKGPRLPDSFLSCL*SPCCCG
Trigger: ACCGCAACAGCATGGTGAGCAGAGGCATGACAGGAA...TGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTCCTATCGCTCCTTGCTaGCAGGCCTTCATGTCTGGT +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTPIAPC*QAFMSG
Trigger: ACCAGACATGAAGGCCTGGCAGCAAGGAGCGATAGG...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGAATCTATAGGAGGGGCTaGAGGCAGTGCCACGAGTCA +
Preference number: 4 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGIYRRG*RQCHES
Trigger: TGACTCGTGGCACTGCCTCCAGCCCCTCCTATAGAT...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTGCCTGGAAGTGGGTCTaGCAGTGGCGGACTGAAGTG +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVAWKWV*QWRTEV
Trigger: CACTTCAGTCCGCCACTGCCAGACCCACTTCCAGGC...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GAGTTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCATGTTTAGAGTTTGCCTaGGCTGCATGCCCATGCCAG +
Preference number: 4 (lower is better)
Translates to: EFPVDQAGSGKGPRLPDSCLEFA*AACPCQ
Trigger: CTGGCATGGGCATGCAGCCCAGGCAAACTCTAAACA...TGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGTTGGCATCGGCACCATaGAGCTCCCAGGGCTTAGAG +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLLASAP*SSQGLE
Trigger: CTCTAAGCCCTGGGAGCTCCATGGTGCCGATGCCAA...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGCTGAGGAGGAGGGATTaGCATCGGCACCATGGAGCT +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLLRRRD*HRHHGA
Trigger: AGCTCCATGGTGCCGATGCCAATCCCTCCTCCTCAG...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGGTTGTTGTATACTCCTaGCTGTGCAGGCGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKVVVYS*LCRRGL
Trigger: CAGCCCACGCCTGCACAGCCAGGAGTATACAACAAC...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGAGTTGTTGTATACTCCTaGCTGTGCAGGCGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGVVVYS*LCRRGL
Trigger: CAGCCCACGCCTGCACAGCCAGGAGTATACAACAAC...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGACACATGACAGCCTTTaGTGGACGGGCACAGGCAAA +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLTHDSL*WTGTGK
Trigger: TTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGT...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
CDS-3UTR TCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGCGAGGCCACTCATGTTaGAAAACTTCACACCTGGGA +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLRGHSC*KTSHLG
Trigger: TCCCAGGTGTGAAGTTTTTCAACATGAGTGGCCTCG...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTCGAGGCCACTCATGTTaGAAAACTTCACACCTGGGA +
Preference number: 4 (lower is better)
Translates to: SQWTRLVQVRVPAYQIHCRGHSC*KTSHLG
Trigger: TCCCAGGTGTGAAGTTTTTCAACATGAGTGGCCTCG...ACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTCCTTTCCTCTTATGTaGGTCTGGGTTAGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLSFPLM*VWVSRV
Trigger: GACCCTGCTAACCCAGACTCACATAAGAGGAAAGGA...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTGGCTCATCTGGAGGGTaGATTAGCATCCTGCAGTTA +
Preference number: 4 (lower is better)
Translates to: SQWTRLVQVRVPAYQIHCGSSGG*ISILQL
Trigger: TAACTGCAGGATGCTAATTCACCCTCCAGATGAGCC...ACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGGAACGAGCCACACCATaGGCTGGAGAGATACTAGGA +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKERATP*AGEILG
Trigger: TCCTAGTATCTCTCCAGCTCATGGTGTGGCTCGTTC...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGAGAACGAGCCACACCATaGGCTGGAGAGATACTAGGA +
Preference number: 4 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGERATP*AGEILG
Trigger: TCCTAGTATCTCTCCAGCTCATGGTGTGGCTCGTTC...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGAGGGATTACTGCTCTGTaGACTGGCCTGTCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGGITAL*TGLSLV
Trigger: AACCAAGGACAGGCCAGTTCACAGAGCAGTAATCCC...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGAGGGACAAGAACCTCCTaGAGAGTTAGCAGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGGTRTS*RVSRGR
Trigger: TCTGCCTCTGCTAACTCTTCAGGAGGTTCTTGTCCC...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGCGACAGACAAAGTGGTaGTATCTGAGGGGCTACCCT +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKRQTKW*YLRGYP
Trigger: AGGGTAGCCCCTCAGATATCACCACTTTGTCTGTCG...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTAGTGGCGGACTGAAGTaGAGCTGGCAGGATCTCCGA +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVSGGLK*SWQDLR
Trigger: TCGGAGATCCTGCCAGCTTCACTTCAGTCCGCCACT...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGGTGAAGGTTTTTGCCTaGCCATGCCTTGGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKVKVFA*PCLGKG
Trigger: GCCCTTTCCAAGGCATGGTCAGGCAAAAACCTTCAC...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGGTGAAGGTTTTTGCCTaGCCATGCCTTGGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQVKVFA*PCLGKG
Trigger: GCCCTTTCCAAGGCATGGTCAGGCAAAAACCTTCAC...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGAGGCATCGTCCCCAGTaGAGGTTTTTGCCTGACCAT +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKRHRPQ*RFLPDH
Trigger: ATGGTCAGGCAAAAACCTTCACTGGGGACGATGCCT...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTAGGCATCGTCCCCAGTaGAGGTTTTTGCCTGACCAT +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTRHRPQ*RFLPDH
Trigger: ATGGTCAGGCAAAAACCTTCACTGGGGACGATGCCT...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGTGGAGAAGAGAACTCTaGGGAGGAGGGATTGGCATC +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKWRREL*GGGIGI
Trigger: GATGCCAATCCCTCCTCCTCAGAGTTCTCTTCTCCA...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAATTCATGTCTGGTGACTaGTACCCGGAGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: GSGKGPRLPDSLYTGRQQFMSGD*YPEAGG
Trigger: TCCACCTGCCTCCGGGTATCAGTCACCAGACATGAA...TTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGGGGGTCTGTGGTCCTaGCGTGGGCTTTTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSGGLWS*RGLLSS
Trigger: GGAACTCAAAAGCCCACGTCAGGACCACAGACCCCC...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGTCAGTCAGTAGCTGCTaGAGGAGGCTCTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLSVSSC*RRLFCW
Trigger: CCAGCAGAAGAGCCTCCTTCAGCAGCTACTGACTGA...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGGCACTTCTGTTCAGATaGTCCCAGGGACACTCTAGG +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKALLFR*SQGHSR
Trigger: CCTAGAGTGTCCCTGGGATCATCTGAACAGAAGTGC...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGGGATGCAGACAAAGGTaGGTGATGGGGGTCTACCTT +
Preference number: 4 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQGCRQR*VMGVYL
Trigger: AAGGTAGACCCCCATCACTCACCTTTGTCTGCATCC...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
CDS-3UTR GCA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACCCCCACGTGCAGTATaGTGTAGACGCTCGTATTCA +
Preference number: 4 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGPPRAV*CRRSYS
Trigger: TGAATACGAGCGTCTACAGCATACTGCACGTGGGGG...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCCCCCACGTGCAGTATaGTGTAGACGCTCGTATTCA +
Preference number: 4 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQPPRAV*CRRSYS
Trigger: TGAATACGAGCGTCTACAGCATACTGCACGTGGGGG...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGGCTATTTCGTCGTGTTaGCTCTTGAGGCCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLAISSC*LLRPRN
Trigger: GTTCCTTGGCCTCAAGAGGCAACACGACGAAATAGC...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGCTTCCCAACCAGTTCTaGCAGCAGCTCTCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLLPNQF*QQLSGN
Trigger: GTTCCCTGAGAGCTGCTGGCAGAACTGGTTGGGAAG...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGAGGGGCTGGAGGCAGTaGCACGAGTCATCACTTCTT +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLRGWRQ*HESSLL
Trigger: AAGAAGTGATGACTCGTGGCACTGCCTCCAGCCCCT...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTTCTGTGAGCTCATCTaGCTGAGGACTGGAGAACTG +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLFCELI*LRTGEL
Trigger: CAGTTCTCCAGTCCTCAGGCAGATGAGCTCACAGAA...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGATTTGCCTGGGCTGCATaGCCATGCCAGGTGAAAAAG +
Preference number: 4 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGFAWAA*PCQVKK
Trigger: CTTTTTCACCTGGCATGGGCATGCAGCCCAGGCAAA...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGAGGTCTGTTTAGAGTTTaGCTGGGCTGCATGCCCATG +
Preference number: 4 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGGLFRV*LGCMPM
Trigger: CATGGGCATGCAGCCCAGGCAAACTCTAAACAGACC...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGTGCTCACCATGCTGTTaGGGTTGGCCAAGGATGCTT +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKCSPCC*GWPRML
Trigger: AAGCATCCTTGGCCAACCGCAACAGCATGGTGAGCA...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGTTCCTGTCATGCCTCTaGTCACCATGCTGTTGCGGT +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKFLSCL*SPCCCG
Trigger: ACCGCAACAGCATGGTGAGCAGAGGCATGACAGGAA...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGTGGATGAGAGCTGGTTaGAGTAGAGGCCTGTGTGTC +
Preference number: 4 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQWMRAG*SRGLCV
Trigger: GACACACAGGCCTCTACTGCAACCAGCTCTCATCCA...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTAGCGCCGTCGAGGGCTaGGCCGACGGAGAGGGACGC +
Preference number: 4 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTSAVEG*ADGEGR
Trigger: GCGTCCCTCTCCGTCGGCGCAGCCCTCGACGGCGCT...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTTTGGTTCTCGGTCCCTaGCTCATCTGGAGGGTGAAT +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTLVLGP*LIWRVN
Trigger: ATTCACCCTCCAGATGAGCCAGGGACCGAGAACCAA...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTGGATGGTGGCAATGTaGATGAACGAGCCACACCAT +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLWMVAM*MNEPHH
Trigger: ATGGTGTGGCTCGTTCATCCACATTGCCACCATCCA...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GAGTTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCAAGGTCTGAGCTCTGCTaGCGGTTTATTCTGGTGGAT +
Preference number: 4 (lower is better)
Translates to: EFPVDQAGSGKGPRLPDSRSELC*RFILVD
Trigger: ATCCACCAGAATAAACCGCCAGCAGAGCTCAGACCT...TGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GAGTTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCAAGGTCAGCTGTAAACTaGCTCTGGGCCTCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: EFPVDQAGSGKGPRLPDSRSAVN*LWASSF
Trigger: AAAACTGGAGGCCCAGAGCCAGTTTACAGCTGACCT...TGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGTATTTAGCCTGGAAGTaGGTCTGGCAGTGGCGGACT +
Preference number: 4 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQYLAWK*VWQWRT
Trigger: AGTCCGCCACTGCCAGACCCACTTCCAGGCTAAATA...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGATGCCTGACCATGCCTTaGAAAGGGCTAGGGAGATTG +
Preference number: 4 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGCLTMP*KGLGRL
Trigger: CAATCTCCCTAGCCCTTTCCAAGGCATGGTCAGGCA...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGTGCCTGACCATGCCTTaGAAAGGGCTAGGGAGATTG +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKCLTMP*KGLGRL
Trigger: CAATCTCCCTAGCCCTTTCCAAGGCATGGTCAGGCA...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTATAGGGGAATTGCTGTaGAGCACCCTGAGGAAGACG +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTIGELL*STLRKT
Trigger: CGTCTTCCTCAGGGTGCTCCACAGCAATTCCCCTAT...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGGCTGGTAGAAGCAGGTaGGGTTCCTGGATTTGTACC +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKAGRSR*GSWICT
Trigger: GGTACAAATCCAGGAACCCCACCTGCTTCTACCAGC...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGAGCTGGTAGAAGCAGGTaGGGTTCCTGGATTTGTACC +
Preference number: 4 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGAGRSR*GSWICT
Trigger: GGTACAAATCCAGGAACCCCACCTGCTTCTACCAGC...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGCCATGCTGTTGCGGTTaGCCAAGGATGCTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKPCCCG*PRMLQD
Trigger: ATCCTGAAGCATCCTTGGCCAACCGCAACAGCATGG...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGAGAGATGGAGCAAAGTTaGCCTCACCTTGGGGAACCA +
Preference number: 4 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGEMEQS*PHLGEP
Trigger: TGGTTCCCCAAGGTGAGGCCAACTTTGCTCCATCTC...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGGTTGTTGTATACTCCTaGCTGTGCAGGCGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLVVVYS*LCRRGL
Trigger: CAGCCCACGCCTGCACAGCCAGGAGTATACAACAAC...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTCTTTTGAGTTCCCAGTaGACCAGGCTGGTTCAGGTA +
Preference number: 4 (lower is better)
Translates to: SQWTRLVQVRVPAYQIHCLLSSQ*TRLVQV
Trigger: TACCTGAACCAGCCTGGTCCACTGGGAACTCAAAAG...ACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAACGGGCCCTTCTTCCTaGGCAGGGTTGGGACTAAGC +
Preference number: 4 (lower is better)
Translates to: RDTLGQYALDQLEQLFLATGPSS*AGLGLS
Trigger: GCTTAGTCCCAACCCTGCCCAGGAAGAAGGGCCCGT...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTCGAGGCCACTCATGTTaGAAAACTTCACACCTGGGA +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTRGHSC*KTSHLG
Trigger: TCCCAGGTGTGAAGTTTTTCAACATGAGTGGCCTCG...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGTCCTTTCCTCTTATGTaGGTCTGGGTTAGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKSFPLM*VWVSRV
Trigger: GACCCTGCTAACCCAGACTCACATAAGAGGAAAGGA...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGCCTCTTTTCCGTGCTTaGTGCCAGTGTGTCACATGG +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLPLFRA*CQCVTW
Trigger: CCATGTGACACACTGGCATCAAGCACGGAAAAGAGG...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp CAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAACACCGTCGTGTTGCCTCTTaGGGCCAAGGAACTCCATTT +
Preference number: 4 (lower is better)
Translates to: QVRVPAYQIHCTLDVSKHRRVAS*GQGTPF
Trigger: AAATGGAGTTCCTTGGCCTCAAGAGGCAACACGACG...GTGTTTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGCTCATCTGGAGGGTaGATTAGCATCCTGCAGTTA +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTGSSGG*ISILQL
Trigger: TAACTGCAGGATGCTAATTCACCCTCCAGATGAGCC...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGGAATTAGTGTCATCTTaGGGAGAAAGCCCACTGTGC +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLELVSS*GESPLC
Trigger: GCACAGTGGGCTTTCTCCTCAAGATGACACTAATTC...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGGCTGCTATGAAGGTCTaGGCTCTGCTGGCGGTTTAT +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLAAMKV*ALLAVY
Trigger: ATAAACCGCCAGCAGAGCTCAGACCTTCATAGCAGC...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGAATCTGACTTCCGGGTaGGCATCCGAAACTTCCTTG +
Preference number: 4 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQNLTSG*ASETSL
Trigger: CAAGGAAGTTTCGGATGCTCACCCGGAAGTCAGATT...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTAATCTGACTTCCGGGTaGGCATCCGAAACTTCCTTG +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTNLTSG*ASETSL
Trigger: CAAGGAAGTTTCGGATGCTCACCCGGAAGTCAGATT...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGACATTGGCTACAATCTaGCTTCCGGGTGAGCATCCG +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLTLATI*LPGEHP
Trigger: CGGATGCTCACCCGGAAGTCAGATTGTAGCCAATGT...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAGGGATTACTGCTCTGTaGACTGGCCTGTCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: GSGKGPRLPDSLYTGRQQGITAL*TGLSLV
Trigger: AACCAAGGACAGGCCAGTTCACAGAGCAGTAATCCC...TTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGGTTATGCAGAAGCCCTaGATCCAGAGGTTTGCCATC +
Preference number: 4 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQVMQKP*IQRFAI
Trigger: GATGGCAAACCTCTGGATTCAGGGCTTCTGCATAAC...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GAGTTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCATACCTGTCCAGTCACTaGCACAGAAGTAGATGCACT +
Preference number: 4 (lower is better)
Translates to: EFPVDQAGSGKGPRLPDSYLSSH*HRSRCT
Trigger: AGTGCATCTACTTCTGTGTCAGTGACTGGACAGGTA...TGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGAAGCGTGGGCAGTAACTaGTCAAACTGGTCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGSVGSN*SNWSRS
Trigger: TGACCTTGACCAGTTTGATCAGTTACTGCCCACGCT...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTGGGTCTTTCTTCCATaGTCAAAGGTGGCGTTGCTT +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLWVFLP*SKVALL
Trigger: AAGCAACGCCACCTTTGATCATGGAAGAAAGACCCA...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTCGGGGAGGTGTTACTTaGACAGGCATCGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSRGGVT*TGIVPS
Trigger: ACTGGGGACGATGCCTGTTCAAGTAACACCTCCCCG...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GAGTTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCAAATCGCTGCTGTAGTTaGAGTCGAAGCTGGTTAGGT +
Preference number: 4 (lower is better)
Translates to: EFPVDQAGSGKGPRLPDSNRCCS*SRSWLG
Trigger: ACCTAACCAGCTTCGACTTCAACTACAGCAGCGATT...TGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTTGCCTGATCTCATATTaGTGCCAACAGGAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: SQWTRLVQVRVPAYQIHCCLISY*CQQEQL
Trigger: CAACTGCTCCTGTTGGCATCAATATGAGATCAGGCA...ACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGAGCTGCATCTGAGGATTaGTTCCAGTGCCAAACTGTC +
Preference number: 4 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGAASED*FQCQTV
Trigger: GACAGTTTGGCACTGGAATCAATCCTCAGATGCAGC...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGGCTGCATCTGAGGATTaGTTCCAGTGCCAAACTGTC +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKAASED*FQCQTV
Trigger: GACAGTTTGGCACTGGAATCAATCCTCAGATGCAGC...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp CAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAACACGCACTTCTGTTCAGATaGTCCCAGGGACACTCTAGG +
Preference number: 4 (lower is better)
Translates to: QVRVPAYQIHCTLDVSKHALLFR*SQGHSR
Trigger: CCTAGAGTGTCCCTGGGATCATCTGAACAGAAGTGC...GTGTTTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
CDS-3UTR GCA 90 bp GGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAACCCCCACGTGCAGTATaGTGTAGACGCTCGTATTCA +
Preference number: 4 (lower is better)
Translates to: GSGKGPRLPDSLYTGRQQPPRAV*CRRSYS
Trigger: TGAATACGAGCGTCTACAGCATACTGCACGTGGGGG...TTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTCTTCCCAACCAGTTCTaGCAGCAGCTCTCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVLPNQF*QQLSGN
Trigger: GTTCCCTGAGAGCTGCTGGCAGAACTGGTTGGGAAG...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTGGTGGATACCATGTTaGTGTTGGATGGTGGCAATG +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLWWIPC*CWMVAM
Trigger: CATTGCCACCATCCAACAGCAACATGGTATCCACCA...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACATCCTGGGCCTTGTTaGCAATCCAGAAGTAACCTG +
Preference number: 4 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGHPGPC*QSRSNL
Trigger: CAGGTTACTTCTGGATTGGCAACAAGGCCCAGGATG...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTCATCCTGGGCCTTGTTaGCAATCCAGAAGTAACCTG +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTHPGPC*QSRSNL
Trigger: CAGGTTACTTCTGGATTGGCAACAAGGCCCAGGATG...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGAGGCACTACTTGTCATaGCAACGGGAGAGCTTAATG +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLRHYLS*QRESLM
Trigger: CATTAAGCTCTCCCGTTGGCATGACAAGTAGTGCCT...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGATTCTGTGAGCTCATCTaGCTGAGGACTGGAGAACTG +
Preference number: 4 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGFCELI*LRTGEL
Trigger: CAGTTCTCCAGTCCTCAGGCAGATGAGCTCACAGAA...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GAGTTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCAGTGTCTATATCAGCATaGCGTAACTGCTGTTCGGCA +
Preference number: 4 (lower is better)
Translates to: EFPVDQAGSGKGPRLPDSVSISA*RNCCSA
Trigger: TGCCGAACAGCAGTTACGGCATGCTGATATAGACAC...TGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGAAGGCAGAGTTGGAAGTaGCTGTGCAAGACAGGACAT +
Preference number: 4 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGRQSWK*LCKTGH
Trigger: ATGTCCTGTCTTGCACAGGCACTTCCAACTCTGCCT...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTAGGCAGAGTTGGAAGTaGCTGTGCAAGACAGGACAT +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTRQSWK*LCKTGH
Trigger: ATGTCCTGTCTTGCACAGGCACTTCCAACTCTGCCT...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGCCCAGTGAAGGTTTTTaGCTGACCATGCCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLPSEGF*LTMPWK
Trigger: TTTCCAAGGCATGGTCAGGCAAAAACCTTCACTGGG...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTAGAGTTTGCCTGGGCTaGATGCCCATGCCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVRVCLG*MPMPGE
Trigger: TTCACCTGGCATGGGCATGCAGCCCAGGCAAACTCT...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp GGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAGGTCTGTTTAGAGTTTaGCTGGGCTGCATGCCCATG +
Preference number: 4 (lower is better)
Translates to: GSGKGPRLPDSLYTGRQQGLFRV*LGCMPM
Trigger: CATGGGCATGCAGCCCAGGCAAACTCTAAACAGACC...TTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTTTCCCGCTGACGTTGTaGCAACATTTGAGCATTCAG +
Preference number: 4 (lower is better)
Translates to: SQWTRLVQVRVPAYQIHCFPLTL*QHLSIQ
Trigger: CTGAATGCTCAAATGTTGGCACAACGTCAGCGGGAA...ACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGAGCATGGCTCTTTGCTaGTGTATTAGCTGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLSMALC*CISCLC
Trigger: ACAGAGGCAGCTAATACAGCAGCAAAGAGCCATGCT...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAATGCTCACCATGCTGTTaGGGTTGGCCAAGGATGCTT +
Preference number: 4 (lower is better)
Translates to: GSGKGPRLPDSLYTGRQQCSPCC*GWPRML
Trigger: AAGCATCCTTGGCCAACCGCAACAGCATGGTGAGCA...TTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGTTTCCTATCGCTCCTTaGTGCCAGGCCTTCATGTCT +
Preference number: 4 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQFPIAP*CQAFMS
Trigger: AGACATGAAGGCCTGGCAGCAAGGAGCGATAGGAAA...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGGCCTGTGTGTCTCAGTaGGGGATCATTTATCTGCTC +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKACVSQ*GIIYLL
Trigger: GAGCAGATAAATGATCCCGCACTGAGACACACAGGC...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTGTCCTGGGTTCCATCTaGTTCTGTTTTGAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: SQWTRLVQVRVPAYQIHCVLGSI*FCFEKV
Trigger: GACCTTCTCAAAACAGAAGCAGATGGAACCCAGGAC...ACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTATTGTACACACAAGCTaGCTGGGATTGGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTIVHTS*LGLGWG
Trigger: TCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAAT...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
CDS-3UTR GCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTGGCAGAGGTAGCTGGTaGAGAATGTCAGGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVGRGSW*RMSGAV
Trigger: GACAGCACCTGACATTCTGCACCAGCTACCTCTGCC...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp CAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAACACTTGGTTCTCGGTCCCTaGCTCATCTGGAGGGTGAAT +
Preference number: 4 (lower is better)
Translates to: QVRVPAYQIHCTLDVSKHLVLGP*LIWRVN
Trigger: ATTCACCCTCCAGATGAGCCAGGGACCGAGAACCAA...GTGTTTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGCTTGGAACAGCTGTCTaGCATAAGATGGTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLLGTAV*HKMVLC
Trigger: GCAGAGAACCATCTTATGCCAGACAGCTGTTCCAAG...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGTGGATGGTGGCAATGTaGATGAACGAGCCACACCAT +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKWMVAM*MNEPHH
Trigger: ATGGTGTGGCTCGTTCATCCACATTGCCACCATCCA...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GAGTTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCAGGCGGTTTATTCTGGTaGATACCATGTTGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: EFPVDQAGSGKGPRLPDSGGLFW*IPCCCW
Trigger: CCAACAGCAACATGGTATCCACCAGAATAAACCGCC...TGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGAGGTCTGAGCTCTGCTaGCGGTTTATTCTGGTGGAT +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKRSELC*RFILVD
Trigger: ATCCACCAGAATAAACCGCCAGCAGAGCTCAGACCT...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTAGGTCTGAGCTCTGCTaGCGGTTTATTCTGGTGGAT +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTRSELC*RFILVD
Trigger: ATCCACCAGAATAAACCGCCAGCAGAGCTCAGACCT...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTCATCTGCCTGAGGACTaGAGAACTGGCAGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVHLPED*RTGREA
Trigger: GGCTTCTCTGCCAGTTCTCCAGTCCTCAGGCAGATG...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp CAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAACACCCTCAGGAGTGGGTTTaGTCATTGGGGTTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: QVRVPAYQIHCTLDVSKHPQEWV*SLGLGL
Trigger: CAAACCCAACCCCAATGACCAAACCCACTCCTGAGG...GTGTTTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTAGGTCAGCTGTAAACTaGCTCTGGGCCTCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTRSAVN*LWASSF
Trigger: AAAACTGGAGGCCCAGAGCCAGTTTACAGCTGACCT...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAATATTTAGCCTGGAAGTaGGTCTGGCAGTGGCGGACT +
Preference number: 4 (lower is better)
Translates to: GSGKGPRLPDSLYTGRQQYLAWK*VWQWRT
Trigger: AGTCCGCCACTGCCAGACCCACTTCCAGGCTAAATA...TTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTGTAATCTATTTAGCCTaGAAGTGGGTCTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: SQWTRLVQVRVPAYQIHCVIYLA*KWVWQW
Trigger: CCACTGCCAGACCCACTTCCAGGCTAAATAGATTAC...ACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTCCCTTCTACTGTTGTaGGTGGACAGAGAAGCTCAT +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLSLLLL*VDREAH
Trigger: ATGAGCTTCTCTGTCCACCCACAACAGTAGAAGGGA...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GAGTTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCATTCCATGATCAAAGGTaGCGTTGCTTGTTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: EFPVDQAGSGKGPRLPDSFHDQR*RCLLWW
Trigger: CCACCACAACAAGCAACGCCACCTTTGATCATGGAA...TGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGTGCCTGACCATGCCTTaGAAAGGGCTAGGGAGATTG +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLCLTMP*KGLGRL
Trigger: CAATCTCCCTAGCCCTTTCCAAGGCATGGTCAGGCA...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTTGAGCATTCAGGGGTaGCTGAGGTGTAATTTGCTG +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLLSIQG*LRCNLL
Trigger: CAGCAAATTACACCTCAGCCACCCCTGAATGCTCAA...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGGCTGGTAGAAGCAGGTaGGGTTCCTGGATTTGTACC +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLAGRSR*GSWICT
Trigger: GGTACAAATCCAGGAACCCCACCTGCTTCTACCAGC...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAACCATGCTGTTGCGGTTaGCCAAGGATGCTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: GSGKGPRLPDSLYTGRQQPCCCG*PRMLQD
Trigger: ATCCTGAAGCATCCTTGGCCAACCGCAACAGCATGG...TTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGCCATGCTGTTGCGGTTaGCCAAGGATGCTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLPCCCG*PRMLQD
Trigger: ATCCTGAAGCATCCTTGGCCAACCGCAACAGCATGG...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCCTGCTCCTGGATACTaGAAGACATTCTGCTGCATC +
Preference number: 4 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQPAPGY*KTFCCI
Trigger: GATGCAGCAGAATGTCTTCCAGTATCCAGGAGCAGG...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGCCTGCTCCTGGATACTaGAAGACATTCTGCTGCATC +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKPAPGY*KTFCCI
Trigger: GATGCAGCAGAATGTCTTCCAGTATCCAGGAGCAGG...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCTTTTGAGTTCCCAGTaGACCAGGCTGGTTCAGGTA +
Preference number: 4 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQLLSSQ*TRLVQV
Trigger: TACCTGAACCAGCCTGGTCCACTGGGAACTCAAAAG...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGTTCACAAATTCTGCATaGTCCCCCACGTGCAGTATG +
Preference number: 4 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQFTNSA*SPTCSM
Trigger: CATACTGCACGTGGGGGATCATGCAGAATTTGTGAA...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GAGTTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCATCCCATCATTCAATATaGATCTATAGGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: EFPVDQAGSGKGPRLPDSSHHSI*IYRRGW
Trigger: CCAGCCCCTCCTATAGATTCATATTGAATGATGGGA...TGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGGAATTAGTGTCATCTTaGGGAGAAAGCCCACTGTGC +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKELVSS*GESPLC
Trigger: GCACAGTGGGCTTTCTCCTCAAGATGACACTAATTC...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGTCTCCTTGGAGACATaGACTGTGCTAGGGATATTC +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTVSLET*TVLGIF
Trigger: GAATATCCCTAGCACAGTTCATGTCTCCAAGGAGAC...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAGTTATGCAGAAGCCCTaGATCCAGAGGTTTGCCATC +
Preference number: 4 (lower is better)
Translates to: GSGKGPRLPDSLYTGRQQVMQKP*IQRFAI
Trigger: GATGGCAAACCTCTGGATTCAGGGCTTCTGCATAAC...TTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTGGGACAAGAACCTCCTaGAGAGTTAGCAGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVGTRTS*RVSRGR
Trigger: TCTGCCTCTGCTAACTCTTCAGGAGGTTCTTGTCCC...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GAGTTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCATCTGTCAATGAGCTATaGGAAGAGGGACAAGAACCT +
Preference number: 4 (lower is better)
Translates to: EFPVDQAGSGKGPRLPDSSVNEL*EEGQEP
Trigger: AGGTTCTTGTCCCTCTTCTCATAGCTCATTGACAGA...TGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGATGCCGTTCTGTCAATaGGCTATGAGAAGAGGGACA +
Preference number: 4 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQMPFCQ*AMRRGT
Trigger: TGTCCCTCTTCTCATAGCTCATTGACAGAACGGCAT...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTCGACAGACAAAGTGGTaGTATCTGAGGGGCTACCCT +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVRQTKW*YLRGYP
Trigger: AGGGTAGCCCCTCAGATATCACCACTTTGTCTGTCG...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp CAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAACACAGCGTGGGCAGTAACTaGTCAAACTGGTCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: QVRVPAYQIHCTLDVSKHSVGSN*SNWSRS
Trigger: TGACCTTGACCAGTTTGATCAGTTACTGCCCACGCT...GTGTTTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTCTGGCAGTGGCGGACTaGAGTGAAGCTGGCAGGATC +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDILAVAD*SEAGRI
Trigger: GATCCTGCCAGCTTCACTTCAGTCCGCCACTGCCAG...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGTTTGTCCATGGAATCTaGTCGCCTGTTCCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKFVHGI*SPVPGC
Trigger: ACAACCAGGAACAGGCGATCAGATTCCATGGACAAA...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGTGGGTCTTTCTTCCATaGTCAAAGGTGGCGTTGCTT +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKWVFLP*SKVALL
Trigger: AAGCAACGCCACCTTTGATCATGGAAGAAAGACCCA...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTGTGAAGGTTTTTGCCTaGCCATGCCTTGGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVVKVFA*PCLGKG
Trigger: GCCCTTTCCAAGGCATGGTCAGGCAAAAACCTTCAC...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp CAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAACACGCTGCATCTGAGGATTaGTTCCAGTGCCAAACTGTC +
Preference number: 4 (lower is better)
Translates to: QVRVPAYQIHCTLDVSKHAASED*FQCQTV
Trigger: GACAGTTTGGCACTGGAATCAATCCTCAGATGCAGC...GTGTTTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGAACATTCTGCTGCATCTaGGGATTGATTCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGTFCCI*GLIPVP
Trigger: TGGCACTGGAATCAATCCTCAGATGCAGCAGAATGT...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp CAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAACACACGTCAGCAAACACCTaGACCTGTTGCACCTGTAGA +
Preference number: 4 (lower is better)
Translates to: QVRVPAYQIHCTLDVSKHTSANT*TCCTCR
Trigger: TCTACAGGTGCAACAGGTTCAGGTGTTTGCTGACGT...GTGTTTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
CDS-3UTR TCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTGGGGGTCTGTGGTCCTaGCGTGGGCTTTTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDIGGLWS*RGLLSS
Trigger: GGAACTCAAAAGCCCACGTCAGGACCACAGACCCCC...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGAAGTTGCCTACTGCATaGTCTTGCTTGATGGTCCTT +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLKLPTA*SCLMVL
Trigger: AAGGACCATCAAGCAAGATCATGCAGTAGGCAACTT...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTTAAAGAGGGATTACTaGTCTGTGAACTGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLLKRDY*SVNWPV
Trigger: GACAGGCCAGTTCACAGAGCAGTAATCCCTCTTTAA...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAATCAGCATGCCGTAACTaGTGTTCGGCAGTTGTTGTC +
Preference number: 4 (lower is better)
Translates to: GSGKGPRLPDSLYTGRQQSACRN*CSAVVV
Trigger: GACAACAACTGCCGAACAGCAGTTACGGCATGCTGA...TTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGAGTGTCTATATCAGCATaGCGTAACTGCTGTTCGGCA +
Preference number: 4 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGVSISA*RNCCSA
Trigger: TGCCGAACAGCAGTTACGGCATGCTGATATAGACAC...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGAGTTGGAAGTGCCTGTaGAAGACAGGACATCTTTGC +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKSWKCL*KTGHLC
Trigger: GCAAAGATGTCCTGTCTTGCACAGGCACTTCCAACT...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGAAGTTGGAAGTGCCTGTaGAAGACAGGACATCTTTGC +
Preference number: 4 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGSWKCL*KTGHLC
Trigger: GCAAAGATGTCCTGTCTTGCACAGGCACTTCCAACT...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTGATCAAAGGTGGCGTTaGTTGTTGTGGTGGAAATCT +
Preference number: 4 (lower is better)
Translates to: SQWTRLVQVRVPAYQIHCDQRWR*LLWWKS
Trigger: AGATTTCCACCACAACAAGCAACGCCACCTTTGATC...ACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTTGGGCTGCATGCCCATaGCAGGTGAAAAAGCACCTC +
Preference number: 4 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSWAACP*QVKKHL
Trigger: GAGGTGCTTTTTCACCTGGCATGGGCATGCAGCCCA...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGTTCCCGCTGACGTTGTaGCAACATTTGAGCATTCAG +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKFPLTL*QHLSIQ
Trigger: CTGAATGCTCAAATGTTGGCACAACGTCAGCGGGAA...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTTCCCAAAGCTTTGCTaGCTCATAAGCATGGCTCTT +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLFPKLC*LISMAL
Trigger: AAGAGCCATGCTTATGAGGCAGCAAAGCTTTGGGAA...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTTGTTCCCAAAGCTTTaGTGCCTCATAAGCATGGCT +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLLFPKL*CLISMA
Trigger: AGCCATGCTTATGAGGCAGCAAAGCTTTGGGAACAA...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTTGCTCACCATGCTGTTaGGGTTGGCCAAGGATGCTT +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVCSPCC*GWPRML
Trigger: AAGCATCCTTGGCCAACCGCAACAGCATGGTGAGCA...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCTATGTTTCCTGTCATaGCTCTGCTCACCATGCTGT +
Preference number: 4 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQLCFLS*LCSPCC
Trigger: ACAGCATGGTGAGCAGAGGCATGACAGGAAACATAG...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCACCTATCGCTCCTTGCTaGCAGGCCTTCATGTCTGGT +
Preference number: 4 (lower is better)
Translates to: RDTLGQYALDQLEQLFLAPIAPC*QAFMSG
Trigger: ACCAGACATGAAGGCCTGGCAGCAAGGAGCGATAGG...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp CAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAACACTTTCCTATCGCTCCTTaGTGCCAGGCCTTCATGTCT +
Preference number: 4 (lower is better)
Translates to: QVRVPAYQIHCTLDVSKHFPIAP*CQAFMS
Trigger: AGACATGAAGGCCTGGCAGCAAGGAGCGATAGGAAA...GTGTTTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGATTCGTATTTCCACCTaGCATGGAAACGGTGATGCT +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLIRIST*HGNGDA
Trigger: AGCATCACCGTTTCCATGGCAGGTGGAAATACGAAT...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGGCCTGTGTGTCTCAGTaGGGGATCATTTATCTGCTC +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLACVSQ*GIIYLL
Trigger: GAGCAGATAAATGATCCCGCACTGAGACACACAGGC...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp GGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAGCCTGTGTGTCTCAGTaGGGGATCATTTATCTGCTC +
Preference number: 4 (lower is better)
Translates to: GSGKGPRLPDSLYTGRQQACVSQ*GIIYLL
Trigger: GAGCAGATAAATGATCCCGCACTGAGACACACAGGC...TTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTTGGATGAGAGCTGGTTaGAGTAGAGGCCTGTGTGTC +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVWMRAG*SRGLCV
Trigger: GACACACAGGCCTCTACTGCAACCAGCTCTCATCCA...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGATTGTACACACAAGCTaGCTGGGATTGGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLIVHTS*LGLGWG
Trigger: TCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAAT...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCACTCTAGGGCAGTATaGTCTAGATCAGCTGGAACA +
Preference number: 4 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQHSRAV*SRSAGT
Trigger: TGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTG...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
CDS-3UTR GCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGCACTCTAGGGCAGTATaGTCTAGATCAGCTGGAACA +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKHSRAV*SRSAGT
Trigger: TGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTG...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTCTTGGAACAGCTGTCTaGCATAAGATGGTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTLGTAV*HKMVLC
Trigger: GCAGAGAACCATCTTATGCCAGACAGCTGTTCCAAG...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTATCTATAGGAGGGGCTaGAGGCAGTGCCACGAGTCA +
Preference number: 4 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSIYRRG*RQCHES
Trigger: TGACTCGTGGCACTGCCTCCAGCCCCTCCTATAGAT...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTAGTTTACACTTGGTGTaGGCGCTAAGCATTGTCCCA +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTSLHLV*ALSIVP
Trigger: TGGGACAATGCTTAGCGCCCACACCAAGTGTAAACT...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTAGCCACACCATGAGCTaGAGAGATACTAGGATTGAC +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTSHTMS*RDTRID
Trigger: GTCAATCCTAGTATCTCTCCAGCTCATGGTGTGGCT...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGAAGCCACACCATGAGCTaGAGAGATACTAGGATTGAC +
Preference number: 4 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGSHTMS*RDTRID
Trigger: GTCAATCCTAGTATCTCTCCAGCTCATGGTGTGGCT...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGTGGATGGTGGCAATGTaGATGAACGAGCCACACCAT +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLWMVAM*MNEPHH
Trigger: ATGGTGTGGCTCGTTCATCCACATTGCCACCATCCA...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp CAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAACACTGGATGGTGGCAATGTaGATGAACGAGCCACACCAT +
Preference number: 4 (lower is better)
Translates to: QVRVPAYQIHCTLDVSKHWMVAM*MNEPHH
Trigger: ATGGTGTGGCTCGTTCATCCACATTGCCACCATCCA...GTGTTTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGATACCATGTTGCTGTTaGATGGTGGCAATGTGGATG +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLIPCCC*MVAMWM
Trigger: CATCCACATTGCCACCATCCAACAGCAACATGGTAT...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGAGGTCTGAGCTCTGCTaGCGGTTTATTCTGGTGGAT +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLRSELC*RFILVD
Trigger: ATCCACCAGAATAAACCGCCAGCAGAGCTCAGACCT...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGATACTGCTCTGTGAACTaGCCTGTCCTTGGTTTAAGG +
Preference number: 4 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGYCSVN*PVLGLR
Trigger: CCTTAAACCAAGGACAGGCCAGTTCACAGAGCAGTA...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTAATTGTTTGGCATCCTaGGCCTTGTTGCCAATCCAG +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTNCLAS*ALLPIQ
Trigger: CTGGATTGGCAACAAGGCCCAGGATGCCAAACAATT...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGAAATTGTTTGGCATCCTaGGCCTTGTTGCCAATCCAG +
Preference number: 4 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGNCLAS*ALLPIQ
Trigger: CTGGATTGGCAACAAGGCCCAGGATGCCAAACAATT...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GAGTTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCAAGCCAACGGAGTTATTaGGTCCTTCATTCATACCCT +
Preference number: 4 (lower is better)
Translates to: EFPVDQAGSGKGPRLPDSSQRSY*VLHSYP
Trigger: AGGGTATGAATGAAGGACCCAATAACTCCGTTGGCT...TGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGGCTGTAAACTGGCTCTaGGCCTCCAGTTTTATTTCC +
Preference number: 4 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQAVNWL*ASSFIS
Trigger: GGAAATAAAACTGGAGGCCCAGAGCCAGTTTACAGC...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGAAGCAGGTGGGGTTCCTaGATTTGTACCATAGTTTGG +
Preference number: 4 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGSRWGS*ICTIVW
Trigger: CCAAACTATGGTACAAATCCAGGAACCCCACCTGCT...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTCTGGCTGTGCAGGCGTaGGCTGGTTCTGGACAGCTT +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDILAVQA*AGSGQL
Trigger: AAGCTGTCCAGAACCAGCCCACGCCTGCACAGCCAG...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTACGGGCCCTTCTTCCTaGGCAGGGTTGGGACTAAGC +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDITGPSS*AGLGLS
Trigger: GCTTAGTCCCAACCCTGCCCAGGAAGAAGGGCCCGT...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGACCTGTTGCACCTGCTaGGTTCCATCTGCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLTCCTC*VPSASV
Trigger: AACAGAAGCAGATGGAACCCAGCAGGTGCAACAGGT...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406961.5
CDS-3UTR TCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGGATATGGTCAAATCTTaGGTTCCAGAGGGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKDMVKS*VPEGSF
Trigger: GAAGCTACCCTCTGGAACTCAAGATTTGACCATATC...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGATATGGTCAAATCTTaGGTTCCAGAGGGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTDMVKS*VPEGSF
Trigger: GAAGCTACCCTCTGGAACTCAAGATTTGACCATATC...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTGCTGGTTACATTCTCTaGCACAAATACAATTCTCCC +
Preference number: 4 (lower is better)
Translates to: SQWTRLVQVRVPAYQIHCAGYIL*HKYNSP
Trigger: GGGAGAATTGTATTTGTGTCAGAGAATGTAACCAGC...ACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGGCTGGTTACATTCTCTaGCACAAATACAATTCTCCC +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLAGYIL*HKYNSP
Trigger: GGGAGAATTGTATTTGTGTCAGAGAATGTAACCAGC...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAATTCACAAATTCTGCATaGTCCCCCACGTGCAGTATG +
Preference number: 4 (lower is better)
Translates to: GSGKGPRLPDSLYTGRQQFTNSA*SPTCSM
Trigger: CATACTGCACGTGGGGGATCATGCAGAATTTGTGAA...TTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTTCCCTGTCGATGATATaGATTCCCATGATGAAAGGT +
Preference number: 4 (lower is better)
Translates to: SQWTRLVQVRVPAYQIHCSLSMI*IPMMKG
Trigger: ACCTTTCATCATGGGAATTCATATCATCGACAGGGA...ACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGAACGAGCCACACCATaGGCTGGAGAGATACTAGGA +
Preference number: 4 (lower is better)
Translates to: RDTLGQYALDQLEQLFLAERATP*AGEILG
Trigger: TCCTAGTATCTCTCCAGCTCATGGTGTGGCTCGTTC...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGGGATTACTGCTCTGTaGACTGGCCTGTCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSGITAL*TGLSLV
Trigger: AACCAAGGACAGGCCAGTTCACAGAGCAGTAATCCC...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGGGACAAGAACCTCCTaGAGAGTTAGCAGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: RDTLGQYALDQLEQLFLAGTRTS*RVSRGR
Trigger: TCTGCCTCTGCTAACTCTTCAGGAGGTTCTTGTCCC...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTCGACAGACAAAGTGGTaGTATCTGAGGGGCTACCCT +
Preference number: 4 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSRQTKW*YLRGYP
Trigger: AGGGTAGCCCCTCAGATATCACCACTTTGTCTGTCG...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGTTTGTCCATGGAATCTaGTCGCCTGTTCCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLFVHGI*SPVPGC
Trigger: ACAACCAGGAACAGGCGATCAGATTCCATGGACAAA...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAATTTGTCCATGGAATCTaGTCGCCTGTTCCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: GSGKGPRLPDSLYTGRQQFVHGI*SPVPGC
Trigger: ACAACCAGGAACAGGCGATCAGATTCCATGGACAAA...TTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGAAGGTTTTTGCCTaGCCATGCCTTGGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: RDTLGQYALDQLEQLFLAVKVFA*PCLGKG
Trigger: GCCCTTTCCAAGGCATGGTCAGGCAAAAACCTTCAC...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp CAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAACACTGCCTGATCTCATATTaGTGCCAACAGGAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: QVRVPAYQIHCTLDVSKHCLISY*CQQEQL
Trigger: CAACTGCTCCTGTTGGCATCAATATGAGATCAGGCA...GTGTTTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GAGTTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCATCTGGACAGCTTGACTaGACACATTGTTGTTTCCTA +
Preference number: 4 (lower is better)
Translates to: EFPVDQAGSGKGPRLPDSSGQLD*THCCFL
Trigger: TAGGAAACAACAATGTGTTCAGTCAAGCTGTCCAGA...TGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGCATCTGCTTCTGTTTTaGGAAGGTCAGTGGATGAGA +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKHLLLF*EGQWMR
Trigger: TCTCATCCACTGACCTTCTCAAAACAGAAGCAGATG...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACATCTGCTTCTGTTTTaGGAAGGTCAGTGGATGAGA +
Preference number: 4 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGHLLLF*EGQWMR
Trigger: TCTCATCCACTGACCTTCTCAAAACAGAAGCAGATG...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGAAGCTCTTTCTGGCAGTaGCATTTTGATTTGAACCCC +
Preference number: 4 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGSSFWQ*HFDLNP
Trigger: GGGGTTCAAATCAAAATGTCACTGCCAGAAAGAGCT...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
CDS-3UTR TCA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGCACTTCTGTTCAGATaGTCCCAGGGACACTCTAGG +
Preference number: 4 (lower is better)
Translates to: RDTLGQYALDQLEQLFLAALLFR*SQGHSR
Trigger: CCTAGAGTGTCCCTGGGATCATCTGAACAGAAGTGC...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGCAGACAAAGGTGAGTaGTGGGGGTCTACCTTTGCT +
Preference number: 4 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSADKGE*WGSTFA
Trigger: AGCAAAGGTAGACCCCCATCACTCACCTTTGTCTGC...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGCAGACAAAGGTGAGTaGTGGGGGTCTACCTTTGCT +
Preference number: 4 (lower is better)
Translates to: RDTLGQYALDQLEQLFLAADKGE*WGSTFA
Trigger: AGCAAAGGTAGACCCCCATCACTCACCTTTGTCTGC...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGGATGCAGACAAAGGTaGGTGATGGGGGTCTACCTT +
Preference number: 4 (lower is better)
Translates to: RDTLGQYALDQLEQLFLAGCRQR*VMGVYL
Trigger: AAGGTAGACCCCCATCACTCACCTTTGTCTGCATCC...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTGCTATTTCGTCGTGTTaGCTCTTGAGGCCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVAISSC*LLRPRN
Trigger: GTTCCTTGGCCTCAAGAGGCAACACGACGAAATAGC...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp GGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAATGGTGGATACCATGTTaGTGTTGGATGGTGGCAATG +
Preference number: 4 (lower is better)
Translates to: GSGKGPRLPDSLYTGRQQWWIPC*CWMVAM
Trigger: CATTGCCACCATCCAACAGCAACATGGTATCCACCA...TTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTCATCCTGGGCCTTGTTaGCAATCCAGAAGTAACCTG +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVHPGPC*QSRSNL
Trigger: CAGGTTACTTCTGGATTGGCAACAAGGCCCAGGATG...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp CAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAACACAGTTGGAAGTGCCTGTaGAAGACAGGACATCTTTGC +
Preference number: 4 (lower is better)
Translates to: QVRVPAYQIHCTLDVSKHSWKCL*KTGHLC
Trigger: GCAAAGATGTCCTGTCTTGCACAGGCACTTCCAACT...GTGTTTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTAGGCAGAGTTGGAAGTaGCTGTGCAAGACAGGACAT +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVRQSWK*LCKTGH
Trigger: ATGTCCTGTCTTGCACAGGCACTTCCAACTCTGCCT...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGATAAGCATGGCTCTTTaGTGCTGTATTAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKISMAL*CCISCL
Trigger: GAGGCAGCTAATACAGCAGCAAAGAGCCATGCTTAT...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTTTGTTCCCAAAGCTTTaGTGCCTCATAAGCATGGCT +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTLFPKL*CLISMA
Trigger: AGCCATGCTTATGAGGCAGCAAAGCTTTGGGAACAA...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTTGCCTCTGCTCACCATaGTGTTGCGGTTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDICLCSP*CCGWPR
Trigger: CCTTGGCCAACCGCAACAGCATGGTGAGCAGAGGCA...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGCTATGTTTCCTGTCATaGCTCTGCTCACCATGCTGT +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLLCFLS*LCSPCC
Trigger: ACAGCATGGTGAGCAGAGGCATGACAGGAAACATAG...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp CAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAACACCTATGTTTCCTGTCATaGCTCTGCTCACCATGCTGT +
Preference number: 4 (lower is better)
Translates to: QVRVPAYQIHCTLDVSKHLCFLS*LCSPCC
Trigger: ACAGCATGGTGAGCAGAGGCATGACAGGAAACATAG...GTGTTTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGTTCATTCCTGGCATCTaGAAAGAGCTCATCTGCATC +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKFIPGI*KELICI
Trigger: GATGCAGATGAGCTCTTTGCAGATGCCAGGAATGAA...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTGCGGGATCATTTATCTaGTCAGGGCACACAGTGTTC +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVAGSFI*SGHTVF
Trigger: GAACACTGTGTGCCCTGAGCAGATAAATGATCCCGC...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTGCCTGTGTGTCTCAGTaGGGGATCATTTATCTGCTC +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVACVSQ*GIIYLL
Trigger: GAGCAGATAAATGATCCCGCACTGAGACACACAGGC...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCATGGATGAGAGCTGGTTaGAGTAGAGGCCTGTGTGTC +
Preference number: 4 (lower is better)
Translates to: RDTLGQYALDQLEQLFLAWMRAG*SRGLCV
Trigger: GACACACAGGCCTCTACTGCAACCAGCTCTCATCCA...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTAAGCGCCGTCGAGGGCTaGGCCGACGGAGAGGGACGC +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLSAVEG*ADGEGR
Trigger: GCGTCCCTCTCCGTCGGCGCAGCCCTCGACGGCGCT...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAATGCCAGTGTGTCACATaGCGATCCTTTCCTCTTATG +
Preference number: 4 (lower is better)
Translates to: GSGKGPRLPDSLYTGRQQCQCVT*RSFPLM
Trigger: CATAAGAGGAAAGGATCGCCATGTGACACACTGGCA...TTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCTGCAGTTAAAGGTATaGCTATTTCGTCGTGTTGCC +
Preference number: 4 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQLQLKV*LFRRVA
Trigger: GGCAACACGACGAAATAGCCATACCTTTAACTGCAG...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGGAAAGGTTGCATGTCTaGACTTTGAGGGTAGCAAAG +
Preference number: 4 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQERLHV*TLRVAK
Trigger: CTTTGCTACCCTCAAAGTCCAGACATGCAACCTTTC...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAAGCCACACCATGAGCTaGAGAGATACTAGGATTGAC +
Preference number: 4 (lower is better)
Translates to: GSGKGPRLPDSLYTGRQQSHTMS*RDTRID
Trigger: GTCAATCCTAGTATCTCTCCAGCTCATGGTGTGGCT...TTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGATACCATGTTGCTGTTaGATGGTGGCAATGTGGATG +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKIPCCC*MVAMWM
Trigger: CATCCACATTGCCACCATCCAACAGCAACATGGTAT...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp CAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAACACGCTGGCGGTTTATTCTaGTGGATACCATGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: QVRVPAYQIHCTLDVSKHAGGLF*WIPCCC
Trigger: ACAGCAACATGGTATCCACCAGAATAAACCGCCAGC...GTGTTTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGGGTTTAAGGCAACATTaGCTACAATCTGACTTCCGG +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKGLRQH*LQSDFR
Trigger: CCGGAAGTCAGATTGTAGCCAATGTTGCCTTAAACC...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTAGCCAACGGAGTTATTaGGTCCTTCATTCATACCCT +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTSQRSY*VLHSYP
Trigger: AGGGTATGAATGAAGGACCCAATAACTCCGTTGGCT...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTAGGTCAGCTGTAAACTaGCTCTGGGCCTCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVRSAVN*LWASSF
Trigger: AAAACTGGAGGCCCAGAGCCAGTTTACAGCTGACCT...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTTATTTAGCCTGGAAGTaGGTCTGGCAGTGGCGGACT +
Preference number: 4 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSYLAWK*VWQWRT
Trigger: AGTCCGCCACTGCCAGACCCACTTCCAGGCTAAATA...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGCAGTTGCTGCAAACTaGTTTAAGATAGCTTGCCGA +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTAVAAN*FKIACR
Trigger: TCGGCAAGCTATCTTAAACCAGTTTGCAGCAACTGC...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTTGTACCATAGTTTGGTaGATAGGGGAATTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTCTIVW*IGELLW
Trigger: CCACAGCAATTCCCCTATCCACCAAACTATGGTACA...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGCTGGTAGAAGCAGGTaGGGTTCCTGGATTTGTACC +
Preference number: 4 (lower is better)
Translates to: RDTLGQYALDQLEQLFLAAGRSR*GSWICT
Trigger: GGTACAAATCCAGGAACCCCACCTGCTTCTACCAGC...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTTTGGCATCGGCACCATaGAGCTCCCAGGGCTTAGAG +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDILASAP*SSQGLE
Trigger: CTCTAAGCCCTGGGAGCTCCATGGTGCCGATGCCAA...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTCTGAGGAGGAGGGATTaGCATCGGCACCATGGAGCT +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDILRRRD*HRHHGA
Trigger: AGCTCCATGGTGCCGATGCCAATCCCTCCTCCTCAG...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTATACCCGGAGGCAGGTaGAGTTTGCTGGAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSIPGGR*SLLEKR
Trigger: TCTCTTCTCCAGCAAACTCCACCTGCCTCCGGGTAT...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTCATCTGGGCCATCATTaGGTTCATGTTCTGAACATT +
Preference number: 4 (lower is better)
Translates to: SQWTRLVQVRVPAYQIHCHLGHH*VHVLNI
Trigger: AATGTTCAGAACATGAACCCAATGATGGCCCAGATG...ACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTTCTGTGGTCCTGACGTaGGCTTTTGAGTTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSSVVLT*AFEFPV
Trigger: CACTGGGAACTCAAAAGCCCACGTCAGGACCACAGA...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GAGTTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTACGACCTGAAGAATaGCTGCAGATTGAGATATCA +
Preference number: 4 (lower is better)
Translates to: EFPVDQAGSGKGPRLPDSLRPEE*LQIEIS
Trigger: TGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG...TGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTCGAGGCCACTCATGTTaGAAAACTTCACACCTGGGA +
Preference number: 4 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSRGHSC*KTSHLG
Trigger: TCCCAGGTGTGAAGTTTTTCAACATGAGTGGCCTCG...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGGCTGGTTACATTCTCTaGCACAAATACAATTCTCCC +
Preference number: 4 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQAGYIL*HKYNSP
Trigger: GGGAGAATTGTATTTGTGTCAGAGAATGTAACCAGC...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGGCTCATCTGGAGGGTaGATTAGCATCCTGCAGTTA +
Preference number: 4 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSGSSGG*ISILQL
Trigger: TAACTGCAGGATGCTAATTCACCCTCCAGATGAGCC...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGATTGGCTGTGACACAGTaGAACACTGCATTACTTCAT +
Preference number: 4 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGLAVTQ*NTALLH
Trigger: ATGAAGTAATGCAGTGTTTCACTGTGTCACAGCCAA...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGATTTACTCGGGGAATTaGCATTCCAGAATTAGTGTC +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLIYSGN*HSRISV
Trigger: GACACTAATTCTGGAATGTCAATTCCCCGAGTAAAT...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTAATCTGACTTCCGGGTaGGCATCCGAAACTTCCTTG +
Preference number: 4 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSNLTSG*ASETSL
Trigger: CAAGGAAGTTTCGGATGCTCACCCGGAAGTCAGATT...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTATGCCGTTCTGTCAATaGGCTATGAGAAGAGGGACA +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVMPFCQ*AMRRGT
Trigger: TGTCCCTCTTCTCATAGCTCATTGACAGAACGGCAT...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTAGCGTGGGCAGTAACTaGTCAAACTGGTCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSSVGSN*SNWSRS
Trigger: TGACCTTGACCAGTTTGATCAGTTACTGCCCACGCT...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGTTGCTGTTGCATGCCTaGTCTCATATTGATGCCAAC +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLLLLHA*SHIDAN
Trigger: GTTGGCATCAATATGAGATCAGGCATGCAACAGCAA...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGTCTGGACAGCTTGACTaGACACATTGTTGTTTCCTA +
Preference number: 4 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQSGQLD*THCCFL
Trigger: TAGGAAACAACAATGTGTTCAGTCAAGCTGTCCAGA...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTTTGCTTGATGGTCCTTaGTTTTATCATCAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: SQWTRLVQVRVPAYQIHCLLDGP*FYHQSQ
Trigger: CTGACTCTGATGATAAAATCAAGGACCATCAAGCAA...ACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTCTGCATGATCTTGCTTaGTGGTCCTTGATTTTATCA +
Preference number: 4 (lower is better)
Translates to: SQWTRLVQVRVPAYQIHCLHDLA*WSLILS
Trigger: TGATAAAATCAAGGACCATCAAGCAAGATCATGCAG...ACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTACGTCAGCAAACACCTaGACCTGTTGCACCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDITSANT*TCCTCW
Trigger: CCAGCAGGTGCAACAGGTTCAGGTGTTTGCTGACGT...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406961.5
CDS-3UTR TCA 90 bp CAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAACACGTTGTTGATTTCTCTTaGTGCCAGTGTGTCACATGG +
Preference number: 4 (lower is better)
Translates to: QVRVPAYQIHCTLDVSKHVVDFS*CQCVTW
Trigger: CCATGTGACACACTGGCATCAAGAGAAATCAACAAC...GTGTTTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407230.5
CDS-3UTR GCA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGCTATTTCGTCGTGTTaGCTCTTGAGGCCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: RDTLGQYALDQLEQLFLAAISSC*LLRPRN
Trigger: GTTCCTTGGCCTCAAGAGGCAACACGACGAAATAGC...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCATTCTGTGAGCTCATCTaGCTGAGGACTGGAGAACTG +
Preference number: 4 (lower is better)
Translates to: RDTLGQYALDQLEQLFLAFCELI*LRTGEL
Trigger: CAGTTCTCCAGTCCTCAGGCAGATGAGCTCACAGAA...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTTCAGCATGCCGTAACTaGTGTTCGGCAGTTGTTGTC +
Preference number: 4 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSSACRN*CSAVVV
Trigger: GACAACAACTGCCGAACAGCAGTTACGGCATGCTGA...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTGTGTCTATATCAGCATaGCGTAACTGCTGTTCGGCA +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVVSISA*RNCCSA
Trigger: TGCCGAACAGCAGTTACGGCATGCTGATATAGACAC...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAAGGCAGAGTTGGAAGTaGCTGTGCAAGACAGGACAT +
Preference number: 4 (lower is better)
Translates to: RDTLGQYALDQLEQLFLARQSWK*LCKTGH
Trigger: ATGTCCTGTCTTGCACAGGCACTTCCAACTCTGCCT...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGCCTGGCAACTGTGCTaGCTTCTCCAGCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTAWQLC*LLQRGQ
Trigger: CTGCCCACGCTGGAGAAGGCAGCACAGTTGCCAGGC...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp CAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAACACATAAGCATGGCTCTTTaGTGCTGTATTAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: QVRVPAYQIHCTLDVSKHISMAL*CCISCL
Trigger: GAGGCAGCTAATACAGCAGCAAAGAGCCATGCTTAT...GTGTTTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAATTCCCAAAGCTTTGCTaGCTCATAAGCATGGCTCTT +
Preference number: 4 (lower is better)
Translates to: GSGKGPRLPDSLYTGRQQFPKLC*LISMAL
Trigger: AAGAGCCATGCTTATGAGGCAGCAAAGCTTTGGGAA...TTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAATTCATTCCTGGCATCTaGAAAGAGCTCATCTGCATC +
Preference number: 4 (lower is better)
Translates to: GSGKGPRLPDSLYTGRQQFIPGI*KELICI
Trigger: GATGCAGATGAGCTCTTTGCAGATGCCAGGAATGAA...TTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGCCTGTGTGTCTCAGTaGGGGATCATTTATCTGCTC +
Preference number: 4 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSACVSQ*GIIYLL
Trigger: GAGCAGATAAATGATCCCGCACTGAGACACACAGGC...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTGTCCTGGGTTCCATCTaGTTCTGTTTTGAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVVLGSI*FCFEKV
Trigger: GACCTTCTCAAAACAGAAGCAGATGGAACCCAGGAC...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
CDS-3UTR GCA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGAAGCAAAGTTGCCTACTaGATGATCTTGCTTGATGGT +
Preference number: 4 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGSKVAY*MILLDG
Trigger: ACCATCAAGCAAGATCATGCAGTAGGCAACTTTGCT...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTTTTGGAAGCAAAGTTaGCTACTGCATGATCTTGCT +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLFWKQS*LLHDLA
Trigger: AGCAAGATCATGCAGTAGGCAACTTTGCTTCCAAAA...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGCCTTTCTCTTTCTCTTaGCTATTAAACCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKPFSFS*LLNLCS
Trigger: GGAGCAGAGGTTTAATAGGCAAGAGAAAGAGAAAGG...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405141.5
CDS-3UTR CCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTTGCCAGTGTGTCACATaGCGATCCTTTCCTCTTATG +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVCQCVT*RSFPLM
Trigger: CATAAGAGGAAAGGATCGCCATGTGACACACTGGCA...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGCAAATCAGACATGACTaGAAATCTTCTCCATCCTCT +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLQIRHD*KSSPSS
Trigger: AGAGGATGGAGAAGATTTCCAGTCATGTCTGATTTG...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCACTGTCTGGCATAAGATaGTTCTCTGCCCTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: RDTLGQYALDQLEQLFLALSGIR*FSALRL
Trigger: CAACCTCAGGGCAGAGAACCATCTTATGCCAGACAG...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTGCTGGCGGTTTATTCTaGTGGATACCATGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVAGGLF*WIPCCC
Trigger: ACAGCAACATGGTATCCACCAGAATAAACCGCCAGC...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGGGTTTAAGGCAACATTaGCTACAATCTGACTTCCGG +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLGLRQH*LQSDFR
Trigger: CCGGAAGTCAGATTGTAGCCAATGTTGCCTTAAACC...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTTTGGTCATTGGGGTTaGGTTTGTATTACATGGATC +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLFGHWG*VCITWI
Trigger: GATCCATGTAATACAAACCCAACCCCAATGACCAAA...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGAAGTGGGTTTGGTCATTaGGGTTGGGTTTGTATTACA +
Preference number: 4 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGSGFGH*GWVCIT
Trigger: TGTAATACAAACCCAACCCCAATGACCAAACCCACT...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTTTGAGCATTCAGGGGTaGCTGAGGTGTAATTTGCTG +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVLSIQG*LRCNLL
Trigger: CAGCAAATTACACCTCAGCCACCCCTGAATGCTCAA...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGCATCTGGGCCATCATTaGGTTCATGTTCTGAACATT +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKHLGHH*VHVLNI
Trigger: AATGTTCAGAACATGAACCCAATGATGGCCCAGATG...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTCATCTGGGCCATCATTaGGTTCATGTTCTGAACATT +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTHLGHH*VHVLNI
Trigger: AATGTTCAGAACATGAACCCAATGATGGCCCAGATG...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGTCTGTCTTCTTGTCCTaGGTTCCATCTGCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLSVFLS*VPSASV
Trigger: AACAGAAGCAGATGGAACCCAGGACAAGAAGACAGA...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
CDS-3UTR CCA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGATGGAACTTGTCGTTTTaGTTCTCCTCCAAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGWNLSF*FSSKSL
Trigger: AAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCA...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
CDS-3UTR CCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTTGGAACTTGTCGTTTTaGTTCTCCTCCAAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTWNLSF*FSSKSL
Trigger: AAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCA...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
CDS-3UTR CCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGTGGAACTTGTCGTTTTaGTTCTCCTCCAAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKWNLSF*FSSKSL
Trigger: AAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCA...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGGTTGGTAACTTCTTTTaGAAGCAAAGTTGCCTACTG +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLVGNFF*KQSCLL
Trigger: CAGTAGGCAACTTTGCTTCCAAAAGAAGTTACCAAC...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405141.5
ENST00000407230.5
3UTR CAA 72 bp AGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTaGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCA +
Preference number: 4 (lower is better)
Translates to: SGGGGASSSSWN*SFWFSSKSLHP
Trigger: TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCATTCACAAATTCTGCATaGTCCCCCACGTGCAGTATG +
Preference number: 4 (lower is better)
Translates to: RDTLGQYALDQLEQLFLAFTNSA*SPTCSM
Trigger: CATACTGCACGTGGGGGATCATGCAGAATTTGTGAA...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTAATACAAATCAGACATaGCTGGAAATCTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: SQWTRLVQVRVPAYQIHCNTNQT*LEIFSI
Trigger: GATGGAGAAGATTTCCAGTCATGTCTGATTTGTATT...ACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGTCCCTGTCGATGATATaGATTCCCATGATGAAAGGT +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLSLSMI*IPMMKG
Trigger: ACCTTTCATCATGGGAATTCATATCATCGACAGGGA...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTTTACTGTCTCCATCTaGAAGTCTGTCATTGTTATG +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLFTVSI*KSVIVM
Trigger: CATAACAATGACAGACTTTCAGATGGAGACAGTAAA...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTCGACAGACAAAGTGGTaGTATCTGAGGGGCTACCCT +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDIRQTKW*YLRGYP
Trigger: AGGGTAGCCCCTCAGATATCACCACTTTGTCTGTCG...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCATACCTGTCCAGTCACTaGCACAGAAGTAGATGCACT +
Preference number: 4 (lower is better)
Translates to: RDTLGQYALDQLEQLFLAYLSSH*HRSRCT
Trigger: AGTGCATCTACTTCTGTGTCAGTGACTGGACAGGTA...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTCTGGCAGTGGCGGACTaGAGTGAAGCTGGCAGGATC +
Preference number: 4 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTLAVAD*SEAGRI
Trigger: GATCCTGCCAGCTTCACTTCAGTCCGCCACTGCCAG...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTTGCCTGATCTCATATTaGTGCCAACAGGAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSCLISY*CQQEQL
Trigger: CAACTGCTCCTGTTGGCATCAATATGAGATCAGGCA...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTTGGAGAAGAGAACTCTaGGGAGGAGGGATTGGCATC +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDIWRREL*GGGIGI
Trigger: GATGCCAATCCCTCCTCCTCAGAGTTCTCTTCTCCA...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp CAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAACACTCTGGACAGCTTGACTaGACACATTGTTGTTTCCTA +
Preference number: 4 (lower is better)
Translates to: QVRVPAYQIHCTLDVSKHSGQLD*THCCFL
Trigger: TAGGAAACAACAATGTGTTCAGTCAAGCTGTCCAGA...GTGTTTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGTGGTTCTGGACAGCTTaGCTGAACACATTGTTGTTT +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLWFWTA*LNTLLF
Trigger: AAACAACAATGTGTTCAGTCAAGCTGTCCAGAACCA...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTCATCTGCTTCTGTTTTaGGAAGGTCAGTGGATGAGA +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVHLLLF*EGQWMR
Trigger: TCTCATCCACTGACCTTCTCAAAACAGAAGCAGATG...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGCTGGCAGTGACATTTTaGTTTGAACCCCAAAGTAAA +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKLAVTF*FEPQSK
Trigger: TTTACTTTGGGGTTCAAATCAAAATGTCACTGCCAG...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTATTCTTCACAAATTCTaGATGATCCCCCACGTGCAG +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVILHKF*MIPHVQ
Trigger: CTGCACGTGGGGGATCATGCAGAATTTGTGAAGAAT...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAAGGCACTACTTGTCATaGCAACGGGAGAGCTTAATG +
Preference number: 4 (lower is better)
Translates to: RDTLGQYALDQLEQLFLARHYLS*QRESLM
Trigger: CATTAAGCTCTCCCGTTGGCATGACAAGTAGTGCCT...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp CAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAACACAGTCTGTCATTGTTATaGAGAAGCCCTGAATCCAGA +
Preference number: 4 (lower is better)
Translates to: QVRVPAYQIHCTLDVSKHSLSLL*RSPESR
Trigger: TCTGGATTCAGGGCTTCTGCATAACAATGACAGACT...GTGTTTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTAAGACAGGACATCTTTaGAGCTTGTGTCTATATCAG +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTKTGHL*SLCLYQ
Trigger: CTGATATAGACACAAGCTGCAAAGATGTCCTGTCTT...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGCGGTGTAGAATTTTATaGCGTTCTGTCAATGAGCTA +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKRCRIL*RSVNEL
Trigger: TAGCTCATTGACAGAACGGCATAAAATTCTACACCG...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGAAATTGGTTATCAATTaGTTCCAATTCCAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLKLVIN*FQFQLR
Trigger: CCTGAGCTGGAATTGGAAGCAATTGATAACCAATTT...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTGATCAAAGGTGGCGTTaGTTGTTGTGGTGGAAATCT +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVDQRWR*LLWWKS
Trigger: AGATTTCCACCACAACAAGCAACGCCACCTTTGATC...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTCCCAGTGAAGGTTTTTaGCTGACCATGCCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSPSEGF*LTMPWK
Trigger: TTTCCAAGGCATGGTCAGGCAAAAACCTTCACTGGG...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTTTCCCAAAGCTTTGCTaGCTCATAAGCATGGCTCTT +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVFPKLC*LISMAL
Trigger: AAGAGCCATGCTTATGAGGCAGCAAAGCTTTGGGAA...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTTTCCTGTCATGCCTCTaGTCACCATGCTGTTGCGGT +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDIFLSCL*SPCCCG
Trigger: ACCGCAACAGCATGGTGAGCAGAGGCATGACAGGAA...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTATTCGTATTTCCACCTaGCATGGAAACGGTGATGCT +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVIRIST*HGNGDA
Trigger: AGCATCACCGTTTCCATGGCAGGTGGAAATACGAAT...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTTTTTGGAAGCAAAGTTaGCTACTGCATGATCTTGCT +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTFWKQS*LLHDLA
Trigger: AGCAAGATCATGCAGTAGGCAACTTTGCTTCCAAAA...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTCTGCAGTTAAAGGTATaGCTATTTCGTCGTGTTGCC +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVLQLKV*LFRRVA
Trigger: GGCAACACGACGAAATAGCCATACCTTTAACTGCAG...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTCTTGGAACAGCTGTCTaGCATAAGATGGTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSLGTAV*HKMVLC
Trigger: GCAGAGAACCATCTTATGCCAGACAGCTGTTCCAAG...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTGAAAGGTTGCATGTCTaGACTTTGAGGGTAGCAAAG +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVERLHV*TLRVAK
Trigger: CTTTGCTACCCTCAAAGTCCAGACATGCAACCTTTC...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGGCGGTTTATTCTGGTaGATACCATGTTGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: RDTLGQYALDQLEQLFLAGGLFW*IPCCCW
Trigger: CCAACAGCAACATGGTATCCACCAGAATAAACCGCC...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTCATCCGAAACTTCCTTaGCTGTTGCTAGAATTACTA +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTHPKLP*LLLELL
Trigger: TAGTAATTCTAGCAACAGCCAAGGAAGTTTCGGATG...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTAGGAAAGGAATTGTTTaGCATCCTGGGCCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSRKGIV*HPGPCC
Trigger: GCAACAAGGCCCAGGATGCCAAACAATTCCTTTCCT...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAAGGAAAGGAATTGTTTaGCATCCTGGGCCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: RDTLGQYALDQLEQLFLARKGIV*HPGPCC
Trigger: GCAACAAGGCCCAGGATGCCAAACAATTCCTTTCCT...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGTAATCTATTTAGCCTaGAAGTGGGTCTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSVIYLA*KWVWQW
Trigger: CCACTGCCAGACCCACTTCCAGGCTAAATAGATTAC...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTCCTGGTTGTCCAAATTaGTTATCAATTGCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: SQWTRLVQVRVPAYQIHCPGCPN*LSIASN
Trigger: ATTGGAAGCAATTGATAACCAATTTGGACAACCAGG...ACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTATAGCTTGCCGATTTTaGTGTATCAACTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTIACRF*CINCCC
Trigger: ACAACAGCAGTTGATACACCAAAATCGGCAAGCTAT...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTGCAGTTGCTGCAAACTaGTTTAAGATAGCTTGCCGA +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVAVAAN*FKIACR
Trigger: TCGGCAAGCTATCTTAAACCAGTTTGCAGCAACTGC...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTTTGAGCATTCAGGGGTaGCTGAGGTGTAATTTGCTG +
Preference number: 4 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSLSIQG*LRCNLL
Trigger: CAGCAAATTACACCTCAGCCACCCCTGAATGCTCAA...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTAGCAGGTGGGGTTCCTaGATTTGTACCATAGTTTGG +
Preference number: 4 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSSRWGS*ICTIVW
Trigger: CCAAACTATGGTACAAATCCAGGAACCCCACCTGCT...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCACTGGCTGTGCAGGCGTaGGCTGGTTCTGGACAGCTT +
Preference number: 4 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPLAVQA*AGSGQL
Trigger: AAGCTGTCCAGAACCAGCCCACGCCTGCACAGCCAG...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTGTTAGCAGGGTCGGATaGACTGTCCCCGAGGCCACT +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSVSRVG*TVPEAT
Trigger: AGTGGCCTCGGGGACAGTTCATCCGACCCTGCTAAC...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGATCGTCATCAGTTGTTaGTTTCTCTTGTTCCATTCT +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKIVISC*FLLFHS
Trigger: AGAATGGAACAAGAGAAATCAACAACTGATGACGAT...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGAAATACAAATCAGACATaGCTGGAAATCTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGNTNQT*LEIFSI
Trigger: GATGGAGAAGATTTCCAGTCATGTCTGATTTGTATT...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGATTTACTCGGGGAATTaGCATTCCAGAATTAGTGTC +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLIYSGN*HSRISV
Trigger: GACACTAATTCTGGAATGTCAATTCCCCGAGTAAAT...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGTTTACTGTCTCCATCTaGAAGTCTGTCATTGTTATG +
Preference number: 4 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQFTVSI*KSVIVM
Trigger: CATAACAATGACAGACTTTCAGATGGAGACAGTAAA...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAAGTGGCGGACTGAAGTaGAGCTGGCAGGATCTCCGA +
Preference number: 4 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPSGGLK*SWQDLR
Trigger: TCGGAGATCCTGCCAGCTTCACTTCAGTCCGCCACT...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTAGTGGCGGACTGAAGTaGAGCTGGCAGGATCTCCGA +
Preference number: 4 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTSGGLK*SWQDLR
Trigger: TCGGAGATCCTGCCAGCTTCACTTCAGTCCGCCACT...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATTGCTGTGGAGCACCCTaGGGAAGACGGGGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNCCGAP*GRRGFP
Trigger: GGGGAACCCCCGTCTTCCTCAGGGTGCTCCACAGCA...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTATGCTGTGGAGCACCCTaGGGAAGACGGGGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLCCGAP*GRRGFP
Trigger: GGGGAACCCCCGTCTTCCTCAGGGTGCTCCACAGCA...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATGCTGTGGAGCACCCTaGGGAAGACGGGGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKCCGAP*GRRGFP
Trigger: GGGGAACCCCCGTCTTCCTCAGGGTGCTCCACAGCA...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTTCTGGACAGCTTGACTaGACACATTGTTGTTTCCTA +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVSGQLD*THCCFL
Trigger: TAGGAAACAACAATGTGTTCAGTCAAGCTGTCCAGA...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGAAGAATGGCTGCAGATTaGGATATCAAAAATCTCAGA +
Preference number: 4 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGRMAAD*DIKNLR
Trigger: TCTGAGATTTTTGATATCTCAATCTGCAGCCATTCT...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTAGAATGGCTGCAGATTaGGATATCAAAAATCTCAGA +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTRMAAD*DIKNLR
Trigger: TCTGAGATTTTTGATATCTCAATCTGCAGCCATTCT...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGCTGGCAGTGACATTTTaGTTTGAACCCCAAAGTAAA +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLLAVTF*FEPQSK
Trigger: TTTACTTTGGGGTTCAAATCAAAATGTCACTGCCAG...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCATTAAAGAGGGATTACTaGTCTGTGAACTGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: RDTLGQYALDQLEQLFLALKRDY*SVNWPV
Trigger: GACAGGCCAGTTCACAGAGCAGTAATCCCTCTTTAA...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTAGTCTGTCATTGTTATaGAGAAGCCCTGAATCCAGA +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVSLSLL*RSPESR
Trigger: TCTGGATTCAGGGCTTCTGCATAACAATGACAGACT...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGAAATTGGTTATCAATTaGTTCCAATTCCAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQKLVIN*FQFQLR
Trigger: CCTGAGCTGGAATTGGAAGCAATTGATAACCAATTT...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTTTGTTCCCAAAGCTTTaGTGCCTCATAAGCATGGCT +
Preference number: 4 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSLFPKL*CLISMA
Trigger: AGCCATGCTTATGAGGCAGCAAAGCTTTGGGAACAA...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGGGCTTTGGCAATTTCTaGAGATGTACATTTCATTTC +
Preference number: 4 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKGFGNF*RCTFHF
Trigger: GAAATGAAATGTACATCTGCAGAAATTGCCAAAGCC...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGGAAAAACTTCACACCTaGGAGACTTCTTTGTTCATA +
Preference number: 4 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQEKLHT*ETSLFI
Trigger: TATGAACAAAGAAGTCTCCCAGGTGTGAAGTTTTTC...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTCTGCAGTTAAAGGTATaGCTATTTCGTCGTGTTGCC +
Preference number: 4 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSLQLKV*LFRRVA
Trigger: GGCAACACGACGAAATAGCCATACCTTTAACTGCAG...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp CAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAACACCAAATCAGACATGACTaGAAATCTTCTCCATCCTCT +
Preference number: 4 (lower is better)
Translates to: QVRVPAYQIHCTLDVSKHQIRHD*KSSPSS
Trigger: AGAGGATGGAGAAGATTTCCAGTCATGTCTGATTTG...GTGTTTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTCTGTCTGGCATAAGATaGTTCTCTGCCCTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDILSGIR*FSALRL
Trigger: CAACCTCAGGGCAGAGAACCATCTTATGCCAGACAG...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTTGGATGGTGGCAATGTaGATGAACGAGCCACACCAT +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDIWMVAM*MNEPHH
Trigger: ATGGTGTGGCTCGTTCATCCACATTGCCACCATCCA...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTATACCATGTTGCTGTTaGATGGTGGCAATGTGGATG +
Preference number: 4 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSIPCCC*MVAMWM
Trigger: CATCCACATTGCCACCATCCAACAGCAACATGGTAT...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGCATCCGAAACTTCCTTaGCTGTTGCTAGAATTACTA +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLHPKLP*LLLELL
Trigger: TAGTAATTCTAGCAACAGCCAAGGAAGTTTCGGATG...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTTCTCTTTGTTATCTTTaGACTCAGCTTTTGCTGGTT +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTSLCYL*TQLLLV
Trigger: AACCAGCAAAAGCTGAGTCCAAAGATAACAAAGAGA...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGTTCTAGTTTTATACTaGAGTTTCCTTGTACCTGTC +
Preference number: 4 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTVLVLY*SFLVPV
Trigger: GACAGGTACAAGGAAACTCCAGTATAAAACTAGAAC...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAATTTGGTCATTGGGGTTaGGTTTGTATTACATGGATC +
Preference number: 4 (lower is better)
Translates to: GSGKGPRLPDSLYTGRQQFGHWG*VCITWI
Trigger: GATCCATGTAATACAAACCCAACCCCAATGACCAAA...TTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTCTGCCTTCTCCAGCGTaGGCAGTAACTGATCAAACT +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDILPSPA*AVTDQT
Trigger: AGTTTGATCAGTTACTGCCCACGCTGGAGAAGGCAG...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGCAGTTGCTGCAAACTaGTTTAAGATAGCTTGCCGA +
Preference number: 4 (lower is better)
Translates to: RDTLGQYALDQLEQLFLAAVAAN*FKIACR
Trigger: TCGGCAAGCTATCTTAAACCAGTTTGCAGCAACTGC...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGCAGTTGCTGCAAACTaGTTTAAGATAGCTTGCCGA +
Preference number: 4 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSAVAAN*FKIACR
Trigger: TCGGCAAGCTATCTTAAACCAGTTTGCAGCAACTGC...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGATTTGTACCATAGTTTaGTGGATAGGGGAATTGCTG +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLICTIV*WIGELL
Trigger: CAGCAATTCCCCTATCCACCAAACTATGGTACAAAT...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAATTTGTACCATAGTTTaGTGGATAGGGGAATTGCTG +
Preference number: 4 (lower is better)
Translates to: GSGKGPRLPDSLYTGRQQICTIV*WIGELL
Trigger: CAGCAATTCCCCTATCCACCAAACTATGGTACAAAT...TTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTCTTTTGAGTTCCCAGTaGACCAGGCTGGTTCAGGTA +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDILLSSQ*TRLVQV
Trigger: TACCTGAACCAGCCTGGTCCACTGGGAACTCAAAAG...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GAGTTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCATTCCTGGAGGCATCTTaGTTTAAATCCATCTTTAAA +
Preference number: 4 (lower is better)
Translates to: EFPVDQAGSGKGPRLPDSFLEAS*FKSIFK
Trigger: TTTAAAGATGGATTTAAACCAAGATGCCTCCAGGAA...TGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
CDS-3UTR CCA 90 bp GGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAGTTGGTAACTTCTTTTaGAAGCAAAGTTGCCTACTG +
Preference number: 4 (lower is better)
Translates to: GSGKGPRLPDSLYTGRQQVGNFF*KQSCLL
Trigger: CAGTAGGCAACTTTGCTTCCAAAAGAAGTTACCAAC...TTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTTTCACAAATTCTGCATaGTCCCCCACGTGCAGTATG +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDIFTNSA*SPTCSM
Trigger: CATACTGCACGTGGGGGATCATGCAGAATTTGTGAA...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTATTTACTCGGGGAATTaGCATTCCAGAATTAGTGTC +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVIYSGN*HSRISV
Trigger: GACACTAATTCTGGAATGTCAATTCCCCGAGTAAAT...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTTGGTGGCAATGTGGATaGACGAGCCACACCATGAGC +
Preference number: 4 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTWWQCG*TSHTMS
Trigger: GCTCATGGTGTGGCTCGTTCATCCACATTGCCACCA...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAATTTACTGTCTCCATCTaGAAGTCTGTCATTGTTATG +
Preference number: 4 (lower is better)
Translates to: GSGKGPRLPDSLYTGRQQFTVSI*KSVIVM
Trigger: CATAACAATGACAGACTTTCAGATGGAGACAGTAAA...TTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCACGGGGGTTCCCCATTTaGACTGGTAGTCCAGATGAG +
Preference number: 4 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPRGFPI*TGSPDE
Trigger: CTCATCTGGACTACCAGTTCAAATGGGGAACCCCCG...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATTGCTGTGGAGCACCCTaGGGAAGACGGGGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYCCGAP*GRRGFP
Trigger: GGGGAACCCCCGTCTTCCTCAGGGTGCTCCACAGCA...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCATGGTTCTGGACAGCTTaGCTGAACACATTGTTGTTT +
Preference number: 4 (lower is better)
Translates to: RDTLGQYALDQLEQLFLAWFWTA*LNTLLF
Trigger: AAACAACAATGTGTTCAGTCAAGCTGTCCAGAACCA...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGAGAATGGCTGCAGATTaGGATATCAAAAATCTCAGA +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLRMAAD*DIKNLR
Trigger: TCTGAGATTTTTGATATCTCAATCTGCAGCCATTCT...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATCGAGATTCCGAGAGGTaGGCGGGCCGGCCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYRDSER*AGRPRS
Trigger: TGACCTTGGCCGGCCCGCTCACCTCTCGGAATCTCG...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000406961.5
CDS-3UTR GCA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGATTACCTGTAGTATCTTaGTTGGTCATAAAGGATTCT +
Preference number: 4 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGLPVVS*LVIKDS
Trigger: AGAATCCTTTATGACCAAGCAAGATACTACAGGTAA...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTTGGTGGATACCATGTTaGTGTTGGATGGTGGCAATG +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDIWWIPC*CWMVAM
Trigger: CATTGCCACCATCCAACAGCAACATGGTATCCACCA...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTAGGCACTACTTGTCATaGCAACGGGAGAGCTTAATG +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDIRHYLS*QRESLM
Trigger: CATTAAGCTCTCCCGTTGGCATGACAAGTAGTGCCT...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTAAGACAGGACATCTTTaGAGCTTGTGTCTATATCAG +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVKTGHL*SLCLYQ
Trigger: CTGATATAGACACAAGCTGCAAAGATGTCCTGTCTT...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAAGCCTGGCAACTGTGCTaGCTTCTCCAGCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKAWQLC*LLQRGQ
Trigger: CTGCCCACGCTGGAGAAGGCAGCACAGTTGCCAGGC...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATGCCTGGCAACTGTGCTaGCTTCTCCAGCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNAWQLC*LLQRGQ
Trigger: CTGCCCACGCTGGAGAAGGCAGCACAGTTGCCAGGC...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTTGGGCTGCATGCCCATaGCAGGTGAAAAAGCACCTC +
Preference number: 4 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTWAACP*QVKKHL
Trigger: GAGGTGCTTTTTCACCTGGCATGGGCATGCAGCCCA...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGTGGTTTAAGATAGCTTaGCGATTTTGGTGTATCAAC +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLWFKIA*RFWCIN
Trigger: GTTGATACACCAAAATCGGCAAGCTATCTTAAACCA...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp CAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAACACTGGTTTAAGATAGCTTaGCGATTTTGGTGTATCAAC +
Preference number: 4 (lower is better)
Translates to: QVRVPAYQIHCTLDVSKHWFKIA*RFWCIN
Trigger: GTTGATACACCAAAATCGGCAAGCTATCTTAAACCA...GTGTTTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTAGCATGGCTCTTTGCTaGTGTATTAGCTGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDISMALC*CISCLC
Trigger: ACAGAGGCAGCTAATACAGCAGCAAAGAGCCATGCT...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTGTCCTGGGTTCCATCTaGTTCTGTTTTGAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDIVLGSI*FCFEKV
Trigger: GACCTTCTCAAAACAGAAGCAGATGGAACCCAGGAC...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
CDS-3UTR GCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTCACTCTAGGGCAGTATaGTCTAGATCAGCTGGAACA +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDIHSRAV*SRSAGT
Trigger: TGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTG...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCGCTGGCAAGCTTCTTaGTTCTCGGTCCCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSRWQAS*FSVPGS
Trigger: TGAGCCAGGGACCGAGAACCAAGAAGCTTGCCAGCG...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTCAAATCAGACATGACTaGAAATCTTCTCCATCCTCT +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVQIRHD*KSSPSS
Trigger: AGAGGATGGAGAAGATTTCCAGTCATGTCTGATTTG...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTGGCGGTTTATTCTGGTaGATACCATGTTGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDIGGLFW*IPCCCW
Trigger: CCAACAGCAACATGGTATCCACCAGAATAAACCGCC...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTAGGAAAGGAATTGTTTaGCATCCTGGGCCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDIRKGIV*HPGPCC
Trigger: GCAACAAGGCCCAGGATGCCAAACAATTCCTTTCCT...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTCATCTGCCTGAGGACTaGAGAACTGGCAGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTHLPED*RTGREA
Trigger: GGCTTCTCTGCCAGTTCTCCAGTCCTCAGGCAGATG...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGGCACTAGTTTGTGACTaGTTTGAGAGTATTTACTGT +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLALVCD*FESIYC
Trigger: ACAGTAAATACTCTCAAACCAGTCACAAACTAGTGC...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAAGTGGGTTTGGTCATTaGGGTTGGGTTTGTATTACA +
Preference number: 4 (lower is better)
Translates to: RDTLGQYALDQLEQLFLASGFGH*GWVCIT
Trigger: TGTAATACAAACCCAACCCCAATGACCAAACCCACT...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTAAGTGGGTCTGGCAGTaGCGGACTGAAGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTKWVWQ*RTEVKL
Trigger: CAGCTTCACTTCAGTCCGCCACTGCCAGACCCACTT...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCACATCTGGGCCATCATTaGGTTCATGTTCTGAACATT +
Preference number: 4 (lower is better)
Translates to: RDTLGQYALDQLEQLFLAHLGHH*VHVLNI
Trigger: AATGTTCAGAACATGAACCCAATGATGGCCCAGATG...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTCTACGACCTGAAGAATaGCTGCAGATTGAGATATCA +
Preference number: 4 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSLRPEE*LQIEIS
Trigger: TGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTGATATGGTCAAATCTTaGGTTCCAGAGGGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDIDMVKS*VPEGSF
Trigger: GAAGCTACCCTCTGGAACTCAAGATTTGACCATATC...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGGTTAGCAGGGTCGGATaGACTGTCCCCGAGGCCACT +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKVSRVG*TVPEAT
Trigger: AGTGGCCTCGGGGACAGTTCATCCGACCCTGCTAAC...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTAATACAAATCAGACATaGCTGGAAATCTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVNTNQT*LEIFSI
Trigger: GATGGAGAAGATTTCCAGTCATGTCTGATTTGTATT...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTTGGTGGCAATGTGGATaGACGAGCCACACCATGAGC +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSWWQCG*TSHTMS
Trigger: GCTCATGGTGTGGCTCGTTCATCCACATTGCCACCA...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGCTGCTATGAAGGTCTaGGCTCTGCTGGCGGTTTAT +
Preference number: 4 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPAAMKV*ALLAVY
Trigger: ATAAACCGCCAGCAGAGCTCAGACCTTCATAGCAGC...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAACATTGGCTACAATCTaGCTTCCGGGTGAGCATCCG +
Preference number: 4 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPTLATI*LPGEHP
Trigger: CGGATGCTCACCCGGAAGTCAGATTGTAGCCAATGT...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGGGATTACTGCTCTGTaGACTGGCCTGTCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTGITAL*TGLSLV
Trigger: AACCAAGGACAGGCCAGTTCACAGAGCAGTAATCCC...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCCTGGCAGTGGCGGACTaGAGTGAAGCTGGCAGGATC +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGLAVAD*SEAGRI
Trigger: GATCCTGCCAGCTTCACTTCAGTCCGCCACTGCCAG...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTTTGCTGTTGCATGCCTaGTCTCATATTGATGCCAAC +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDILLLHA*SHIDAN
Trigger: GTTGGCATCAATATGAGATCAGGCATGCAACAGCAA...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCGGCCTTCATGTCTGGTaGCTGATACCCGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGGLHVW*LIPGGR
Trigger: CCTGCCTCCGGGTATCAGTCACCAGACATGAAGGCC...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTATTGGGTTCATGTTCTaGACATTCGTATTTCCACCT +
Preference number: 4 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSIGFMF*TFVFPP
Trigger: AGGTGGAAATACGAATGTTCAGAACATGAACCCAAT...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTACCTGACGTGGGCTTTTaGGTTCCCAGTGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLPDVGF*VPSGPG
Trigger: GCCTGGTCCACTGGGAACTCAAAAGCCCACGTCAGG...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGCCTGACGTGGGCTTTTaGGTTCCCAGTGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKPDVGF*VPSGPG
Trigger: GCCTGGTCCACTGGGAACTCAAAAGCCCACGTCAGG...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCGGGGGTCTGTGGTCCTaGCGTGGGCTTTTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGGGLWS*RGLLSS
Trigger: GGAACTCAAAAGCCCACGTCAGGACCACAGACCCCC...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCATTGCTTGATGGTCCTTaGTTTTATCATCAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: RDTLGQYALDQLEQLFLALLDGP*FYHQSQ
Trigger: CTGACTCTGATGATAAAATCAAGGACCATCAAGCAA...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTAAGTTGCCTACTGCATaGTCTTGCTTGATGGTCCTT +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDIKLPTA*SCLMVL
Trigger: AAGGACCATCAAGCAAGATCATGCAGTAGGCAACTT...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTATTCTTCACAAATTCTaGATGATCCCCCACGTGCAG +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDIILHKF*MIPHVQ
Trigger: CTGCACGTGGGGGATCATGCAGAATTTGTGAAGAAT...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCTTCCCAACCAGTTCTaGCAGCAGCTCTCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSLPNQF*QQLSGN
Trigger: GTTCCCTGAGAGCTGCTGGCAGAACTGGTTGGGAAG...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCACGGTGTAGAATTTTATaGCGTTCTGTCAATGAGCTA +
Preference number: 4 (lower is better)
Translates to: RDTLGQYALDQLEQLFLARCRIL*RSVNEL
Trigger: TAGCTCATTGACAGAACGGCATAAAATTCTACACCG...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTTGGGCTGCATGCCCATaGCAGGTGAAAAAGCACCTC +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSWAACP*QVKKHL
Trigger: GAGGTGCTTTTTCACCTGGCATGGGCATGCAGCCCA...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCTGCCTCTGCTCACCATaGTGTTGCGGTTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGCLCSP*CCGWPR
Trigger: CCTTGGCCAACCGCAACAGCATGGTGAGCAGAGGCA...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTTTCCTGTCATGCCTCTaGTCACCATGCTGTTGCGGT +
Preference number: 4 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTFLSCL*SPCCCG
Trigger: ACCGCAACAGCATGGTGAGCAGAGGCATGACAGGAA...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCATGGATGAGAGCTGGTTaGAGTAGAGGCCTGTGTGTC +
Preference number: 4 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPWMRAG*SRGLCV
Trigger: GACACACAGGCCTCTACTGCAACCAGCTCTCATCCA...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTAGCCAACGGAGTTATTaGGTCCTTCATTCATACCCT +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDISQRSY*VLHSYP
Trigger: AGGGTATGAATGAAGGACCCAATAACTCCGTTGGCT...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCACCTCAGGAGTGGGTTTaGTCATTGGGGTTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPPQEWV*SLGLGL
Trigger: CAAACCCAACCCCAATGACCAAACCCACTCCTGAGG...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTAAGTGGGTCTGGCAGTaGCGGACTGAAGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSKWVWQ*RTEVKL
Trigger: CAGCTTCACTTCAGTCCGCCACTGCCAGACCCACTT...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTTATTTAGCCTGGAAGTaGGTCTGGCAGTGGCGGACT +
Preference number: 4 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTYLAWK*VWQWRT
Trigger: AGTCCGCCACTGCCAGACCCACTTCCAGGCTAAATA...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCATGTTTAGAGTTTGCCTaGGCTGCATGCCCATGCCAG +
Preference number: 4 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPCLEFA*AACPCQ
Trigger: CTGGCATGGGCATGCAGCCCAGGCAAACTCTAAACA...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAATAGCTTGCCGATTTTaGTGTATCAACTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: RDTLGQYALDQLEQLFLAIACRF*CINCCC
Trigger: ACAACAGCAGTTGATACACCAAAATCGGCAAGCTAT...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAATAGGGGAATTGCTGTaGAGCACCCTGAGGAAGACG +
Preference number: 4 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPIGELL*STLRKT
Trigger: CGTCTTCCTCAGGGTGCTCCACAGCAATTCCCCTAT...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTTGTACCATAGTTTGGTaGATAGGGGAATTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDICTIVW*IGELLW
Trigger: CCACAGCAATTCCCCTATCCACCAAACTATGGTACA...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAATTTGTACCATAGTTTaGTGGATAGGGGAATTGCTG +
Preference number: 4 (lower is better)
Translates to: RDTLGQYALDQLEQLFLAICTIV*WIGELL
Trigger: CAGCAATTCCCCTATCCACCAAACTATGGTACAAAT...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTATTTGTACCATAGTTTaGTGGATAGGGGAATTGCTG +
Preference number: 4 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSICTIV*WIGELL
Trigger: CAGCAATTCCCCTATCCACCAAACTATGGTACAAAT...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCTTGGCATCGGCACCATaGAGCTCCCAGGGCTTAGAG +
Preference number: 4 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGLASAP*SSQGLE
Trigger: CTCTAAGCCCTGGGAGCTCCATGGTGCCGATGCCAA...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGCTGGCTGTGCAGGCGTaGGCTGGTTCTGGACAGCTT +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKLAVQA*AGSGQL
Trigger: AAGCTGTCCAGAACCAGCCCACGCCTGCACAGCCAG...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATACGGGCCCTTCTTCCTaGGCAGGGTTGGGACTAAGC +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNTGPSS*AGLGLS
Trigger: GCTTAGTCCCAACCCTGCCCAGGAAGAAGGGCCCGT...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCTACACACAAGCTGCCTaGGATTGGGATGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGYTQAA*DWDGEG
Trigger: GCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTA...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
CDS-3UTR CCA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGTTCCTGGAGGCATCTTaGTTTAAATCCATCTTTAAA +
Preference number: 4 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLFLEAS*FKSIFK
Trigger: TTTAAAGATGGATTTAAACCAAGATGCCTCCAGGAA...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAATCGTCATCAGTTGTTaGTTTCTCTTGTTCCATTCT +
Preference number: 4 (lower is better)
Translates to: RDTLGQYALDQLEQLFLAIVISC*FLLFHS
Trigger: AGAATGGAACAAGAGAAATCAACAACTGATGACGAT...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTTTGGCTGTGACACAGTaGAACACTGCATTACTTCAT +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDILAVTQ*NTALLH
Trigger: ATGAAGTAATGCAGTGTTTCACTGTGTCACAGCCAA...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTACATTGGCTACAATCTaGCTTCCGGGTGAGCATCCG +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSTLATI*LPGEHP
Trigger: CGGATGCTCACCCGGAAGTCAGATTGTAGCCAATGT...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAAGTGAGCTCATCTGCCTaGGGACTGGAGAACTGGCAG +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKVSSSA*GLENWQ
Trigger: CTGCCAGTTCTCCAGTCCTCAGGCAGATGAGCTCAC...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATGTGAGCTCATCTGCCTaGGGACTGGAGAACTGGCAG +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNVSSSA*GLENWQ
Trigger: CTGCCAGTTCTCCAGTCCTCAGGCAGATGAGCTCAC...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTGGGACAAGAACCTCCTaGAGAGTTAGCAGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSGTRTS*RVSRGR
Trigger: TCTGCCTCTGCTAACTCTTCAGGAGGTTCTTGTCCC...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTAGGCATCGTCCCCAGTaGAGGTTTTTGCCTGACCAT +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSRHRPQ*RFLPDH
Trigger: ATGGTCAGGCAAAAACCTTCACTGGGGACGATGCCT...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATCGGGGAGGTGTTACTTaGACAGGCATCGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNRGGVT*TGIVPS
Trigger: ACTGGGGACGATGCCTGTTCAAGTAACACCTCCCCG...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGCTGCATCTGAGGATTaGTTCCAGTGCCAAACTGTC +
Preference number: 4 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPAASED*FQCQTV
Trigger: GACAGTTTGGCACTGGAATCAATCCTCAGATGCAGC...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTTGGTTCTGGACAGCTTaGCTGAACACATTGTTGTTT +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDIWFWTA*LNTLLF
Trigger: AAACAACAATGTGTTCAGTCAAGCTGTCCAGAACCA...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCTCAGTCAGTAGCTGCTaGAGGAGGCTCTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGSVSSC*RRLFCW
Trigger: CCAGCAGAAGAGCCTCCTTCAGCAGCTACTGACTGA...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTCATCCTGGGCCTTGTTaGCAATCCAGAAGTAACCTG +
Preference number: 4 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTHPGPC*QSRSNL
Trigger: CAGGTTACTTCTGGATTGGCAACAAGGCCCAGGATG...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATGCCTCTGCTCACCATaGTGTTGCGGTTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKCLCSP*CCGWPR
Trigger: CCTTGGCCAACCGCAACAGCATGGTGAGCAGAGGCA...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTTTTCCTATCGCTCCTTaGTGCCAGGCCTTCATGTCT +
Preference number: 4 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTFPIAP*CQAFMS
Trigger: AGACATGAAGGCCTGGCAGCAAGGAGCGATAGGAAA...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCATTTCCTATCGCTCCTTaGTGCCAGGCCTTCATGTCT +
Preference number: 4 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPFPIAP*CQAFMS
Trigger: AGACATGAAGGCCTGGCAGCAAGGAGCGATAGGAAA...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAAGTATACTCCTGGCTGTaGAGGCGTGGGCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKVYSWL*RRGLVL
Trigger: CAGAACCAGCCCACGCCTGCACAGCCAGGAGTATAC...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGGTATACTCCTGGCTGTaGAGGCGTGGGCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKVYSWL*RRGLVL
Trigger: CAGAACCAGCCCACGCCTGCACAGCCAGGAGTATAC...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGCGGGATCATTTATCTaGTCAGGGCACACAGTGTTC +
Preference number: 4 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTAGSFI*SGHTVF
Trigger: GAACACTGTGTGCCCTGAGCAGATAAATGATCCCGC...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTAGCAAAGTTGCCTACTaGATGATCTTGCTTGATGGT +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDISKVAY*MILLDG
Trigger: ACCATCAAGCAAGATCATGCAGTAGGCAACTTTGCT...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAAATCTTGCATTTGTCTaGTTTTACACTCAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: RDTLGQYALDQLEQLFLANLAFV*FYTQAV
Trigger: GACAGCTTGAGTGTAAAACCAGACAAATGCAAGATT...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTACGCTGGCAAGCTTCTTaGTTCTCGGTCCCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLRWQAS*FSVPGS
Trigger: TGAGCCAGGGACCGAGAACCAAGAAGCTTGCCAGCG...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAACGCTGGCAAGCTTCTTaGTTCTCGGTCCCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKRWQAS*FSVPGS
Trigger: TGAGCCAGGGACCGAGAACCAAGAAGCTTGCCAGCG...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCATCTATAGGAGGGGCTaGAGGCAGTGCCACGAGTCA +
Preference number: 4 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGIYRRG*RQCHES
Trigger: TGACTCGTGGCACTGCCTCCAGCCCCTCCTATAGAT...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCATCTCTTTGTTATCTTTaGACTCAGCTTTTGCTGGTT +
Preference number: 4 (lower is better)
Translates to: RDTLGQYALDQLEQLFLASLCYL*TQLLLV
Trigger: AACCAGCAAAAGCTGAGTCCAAAGATAACAAAGAGA...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATGCCTGGAAGTGGGTCTaGCAGTGGCGGACTGAAGTG +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYAWKWV*QWRTEV
Trigger: CACTTCAGTCCGCCACTGCCAGACCCACTTCCAGGC...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTCCTGGTTGTCCAAATTaGTTATCAATTGCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSPGCPN*LSIASN
Trigger: ATTGGAAGCAATTGATAACCAATTTGGACAACCAGG...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTTGCCTGACCATGCCTTaGAAAGGGCTAGGGAGATTG +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSCLTMP*KGLGRL
Trigger: CAATCTCCCTAGCCCTTTCCAAGGCATGGTCAGGCA...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTTGTTTAGAGTTTGCCTaGGCTGCATGCCCATGCCAG +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSCLEFA*AACPCQ
Trigger: CTGGCATGGGCATGCAGCCCAGGCAAACTCTAAACA...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATTTGGCATCGGCACCATaGAGCTCCCAGGGCTTAGAG +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNLASAP*SSQGLE
Trigger: CTCTAAGCCCTGGGAGCTCCATGGTGCCGATGCCAA...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATCTGAGGAGGAGGGATTaGCATCGGCACCATGGAGCT +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNLRRRD*HRHHGA
Trigger: AGCTCCATGGTGCCGATGCCAATCCCTCCTCCTCAG...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTCTACGACCTGAAGAATaGCTGCAGATTGAGATATCA +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDILRPEE*LQIEIS
Trigger: TGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATCATGACAGCCTTTGGTaGACGGGCACAGGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNHDSLW*TGTGKA
Trigger: GGCTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATG...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCTGCCTGGGATTGGGATaGGGAGGGCTGCTGATTTCG +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGCLGLG*GGLLIS
Trigger: CGAAATCAGCAGCCCTCCCCATCCCAATCCCAGGCA...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGTGCCTGGGATTGGGATaGGGAGGGCTGCTGATTTCG +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKCLGLG*GGLLIS
Trigger: CGAAATCAGCAGCCCTCCCCATCCCAATCCCAGGCA...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATACACACAAGCTGCCTaGGATTGGGATGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKYTQAA*DWDGEG
Trigger: GCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTA...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTTCCTTTCCTCTTATGTaGGTCTGGGTTAGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSSFPLM*VWVSRV
Trigger: GACCCTGCTAACCCAGACTCACATAAGAGGAAAGGA...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTGGCTCATCTGGAGGGTaGATTAGCATCCTGCAGTTA +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSGSSGG*ISILQL
Trigger: TAACTGCAGGATGCTAATTCACCCTCCAGATGAGCC...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATGTGAGCTCATCTGCCTaGGGACTGGAGAACTGGCAG +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYVSSSA*GLENWQ
Trigger: CTGCCAGTTCTCCAGTCCTCAGGCAGATGAGCTCAC...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTGTTATGCAGAAGCCCTaGATCCAGAGGTTTGCCATC +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSVMQKP*IQRFAI
Trigger: GATGGCAAACCTCTGGATTCAGGGCTTCTGCATAAC...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCCGACAGACAAAGTGGTaGTATCTGAGGGGCTACCCT +
Preference number: 4 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGRQTKW*YLRGYP
Trigger: AGGGTAGCCCCTCAGATATCACCACTTTGTCTGTCG...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTTACCTGTCCAGTCACTaGCACAGAAGTAGATGCACT +
Preference number: 4 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTYLSSH*HRSRCT
Trigger: AGTGCATCTACTTCTGTGTCAGTGACTGGACAGGTA...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCATACCTGTCCAGTCACTaGCACAGAAGTAGATGCACT +
Preference number: 4 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPYLSSH*HRSRCT
Trigger: AGTGCATCTACTTCTGTGTCAGTGACTGGACAGGTA...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATAGTGGCGGACTGAAGTaGAGCTGGCAGGATCTCCGA +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYSGGLK*SWQDLR
Trigger: TCGGAGATCCTGCCAGCTTCACTTCAGTCCGCCACT...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAAATCGCTGCTGTAGTTaGAGTCGAAGCTGGTTAGGT +
Preference number: 4 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPNRCCS*SRSWLG
Trigger: ACCTAACCAGCTTCGACTTCAACTACAGCAGCGATT...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCATGCCTGATCTCATATTaGTGCCAACAGGAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPCLISY*CQQEQL
Trigger: CAACTGCTCCTGTTGGCATCAATATGAGATCAGGCA...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCTGGAGAAGAGAACTCTaGGGAGGAGGGATTGGCATC +
Preference number: 4 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGWRREL*GGGIGI
Trigger: GATGCCAATCCCTCCTCCTCAGAGTTCTCTTCTCCA...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATTTCATGTCTGGTGACTaGTACCCGGAGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNFMSGD*YPEAGG
Trigger: TCCACCTGCCTCCGGGTATCAGTCACCAGACATGAA...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTATTGGGTTCATGTTCTaGACATTCGTATTTCCACCT +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDIIGFMF*TFVFPP
Trigger: AGGTGGAAATACGAATGTTCAGAACATGAACCCAAT...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTATCAGTCAGTAGCTGCTaGAGGAGGCTCTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLSVSSC*RRLFCW
Trigger: CCAGCAGAAGAGCCTCCTTCAGCAGCTACTGACTGA...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTGCTATTTCGTCGTGTTaGCTCTTGAGGCCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSAISSC*LLRPRN
Trigger: GTTCCTTGGCCTCAAGAGGCAACACGACGAAATAGC...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATAGGGGCTGGAGGCAGTaGCACGAGTCATCACTTCTT +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNRGWRQ*HESSLL
Trigger: AAGAAGTGATGACTCGTGGCACTGCCTCCAGCCCCT...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGAGGGGCTGGAGGCAGTaGCACGAGTCATCACTTCTT +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKRGWRQ*HESSLL
Trigger: AAGAAGTGATGACTCGTGGCACTGCCTCCAGCCCCT...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCATCCTGGGCCTTGTTaGCAATCCAGAAGTAACCTG +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSHPGPC*QSRSNL
Trigger: CAGGTTACTTCTGGATTGGCAACAAGGCCCAGGATG...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTTCAGCATGCCGTAACTaGTGTTCGGCAGTTGTTGTC +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSSACRN*CSAVVV
Trigger: GACAACAACTGCCGAACAGCAGTTACGGCATGCTGA...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTAAGACAGGACATCTTTaGAGCTTGTGTCTATATCAG +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDIKTGHL*SLCLYQ
Trigger: CTGATATAGACACAAGCTGCAAAGATGTCCTGTCTT...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCTTTGCCTGGGCTGCATaGCCATGCCAGGTGAAAAAG +
Preference number: 4 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGFAWAA*PCQVKK
Trigger: CTTTTTCACCTGGCATGGGCATGCAGCCCAGGCAAA...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCAGAGTTTGCCTGGGCTaGATGCCCATGCCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGRVCLG*MPMPGE
Trigger: TTCACCTGGCATGGGCATGCAGCCCAGGCAAACTCT...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTAAGAGTTTGCCTGGGCTaGATGCCCATGCCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLRVCLG*MPMPGE
Trigger: TTCACCTGGCATGGGCATGCAGCCCAGGCAAACTCT...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTTTCCCGCTGACGTTGTaGCAACATTTGAGCATTCAG +
Preference number: 4 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTFPLTL*QHLSIQ
Trigger: CTGAATGCTCAAATGTTGGCACAACGTCAGCGGGAA...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTAGCATGGCTCTTTGCTaGTGTATTAGCTGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTSMALC*CISCLC
Trigger: ACAGAGGCAGCTAATACAGCAGCAAAGAGCCATGCT...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCTGCTCACCATGCTGTTaGGGTTGGCCAAGGATGCTT +
Preference number: 4 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGCSPCC*GWPRML
Trigger: AAGCATCCTTGGCCAACCGCAACAGCATGGTGAGCA...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCACTATGTTTCCTGTCATaGCTCTGCTCACCATGCTGT +
Preference number: 4 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPLCFLS*LCSPCC
Trigger: ACAGCATGGTGAGCAGAGGCATGACAGGAAACATAG...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCCCTATCGCTCCTTGCTaGCAGGCCTTCATGTCTGGT +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGPIAPC*QAFMSG
Trigger: ACCAGACATGAAGGCCTGGCAGCAAGGAGCGATAGG...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTACCTATCGCTCCTTGCTaGCAGGCCTTCATGTCTGGT +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLPIAPC*QAFMSG
Trigger: ACCAGACATGAAGGCCTGGCAGCAAGGAGCGATAGG...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATGTATACTCCTGGCTGTaGAGGCGTGGGCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYVYSWL*RRGLVL
Trigger: CAGAACCAGCCCACGCCTGCACAGCCAGGAGTATAC...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTATTGTACACACAAGCTaGCTGGGATTGGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSIVHTS*LGLGWG
Trigger: TCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAAT...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTAGGCAGAGGTAGCTGGTaGAGAATGTCAGGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLGRGSW*RMSGAV
Trigger: GACAGCACCTGACATTCTGCACCAGCTACCTCTGCC...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTCTTGGAACAGCTGTCTaGCATAAGATGGTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTLGTAV*HKMVLC
Trigger: GCAGAGAACCATCTTATGCCAGACAGCTGTTCCAAG...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATCTATAGGAGGGGCTaGAGGCAGTGCCACGAGTCA +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNIYRRG*RQCHES
Trigger: TGACTCGTGGCACTGCCTCCAGCCCCTCCTATAGAT...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTAATCTATAGGAGGGGCTaGAGGCAGTGCCACGAGTCA +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLIYRRG*RQCHES
Trigger: TGACTCGTGGCACTGCCTCCAGCCCCTCCTATAGAT...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGGCGGTTTATTCTGGTaGATACCATGTTGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTGGLFW*IPCCCW
Trigger: CCAACAGCAACATGGTATCCACCAGAATAAACCGCC...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGCTGGCGGTTTATTCTaGTGGATACCATGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPAGGLF*WIPCCC
Trigger: ACAGCAACATGGTATCCACCAGAATAAACCGCCAGC...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGAACTGGCCTGTCCTTaGTTTAAGGCAACATTGGCT +
Preference number: 4 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTELACP*FKATLA
Trigger: AGCCAATGTTGCCTTAAACCAAGGACAGGCCAGTTC...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCCATCTGCCTGAGGACTaGAGAACTGGCAGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGHLPED*RTGREA
Trigger: GGCTTCTCTGCCAGTTCTCCAGTCCTCAGGCAGATG...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATCATCTGCCTGAGGACTaGAGAACTGGCAGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNHLPED*RTGREA
Trigger: GGCTTCTCTGCCAGTTCTCCAGTCCTCAGGCAGATG...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTTTTGGTCATTGGGGTTaGGTTTGTATTACATGGATC +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDIFGHWG*VCITWI
Trigger: GATCCATGTAATACAAACCCAACCCCAATGACCAAA...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCCCTCAGGAGTGGGTTTaGTCATTGGGGTTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGPQEWV*SLGLGL
Trigger: CAAACCCAACCCCAATGACCAAACCCACTCCTGAGG...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGCTGTAAACTGGCTCTaGGCCTCCAGTTTTATTTCC +
Preference number: 4 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTAVNWL*ASSFIS
Trigger: GGAAATAAAACTGGAGGCCCAGAGCCAGTTTACAGC...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGCTGTAAACTGGCTCTaGGCCTCCAGTTTTATTTCC +
Preference number: 4 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPAVNWL*ASSFIS
Trigger: GGAAATAAAACTGGAGGCCCAGAGCCAGTTTACAGC...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTAGGTCAGCTGTAAACTaGCTCTGGGCCTCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSRSAVN*LWASSF
Trigger: AAAACTGGAGGCCCAGAGCCAGTTTACAGCTGACCT...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAAAAGTGGGTCTGGCAGTaGCGGACTGAAGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKKWVWQ*RTEVKL
Trigger: CAGCTTCACTTCAGTCCGCCACTGCCAGACCCACTT...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCAAGTGGGTCTGGCAGTaGCGGACTGAAGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGKWVWQ*RTEVKL
Trigger: CAGCTTCACTTCAGTCCGCCACTGCCAGACCCACTT...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTTGTATTATTTGTCCATaGAATCTGATCGCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDICIICP*NLIACS
Trigger: GGAACAGGCGATCAGATTCCATGGACAAATAATACA...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCCTGCTCCTGGATACTaGAAGACATTCTGCTGCATC +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSPAPGY*KTFCCI
Trigger: GATGCAGCAGAATGTCTTCCAGTATCCAGGAGCAGG...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCATACCCGGAGGCAGGTaGAGTTTGCTGGAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGIPGGR*SLLEKR
Trigger: TCTCTTCTCCAGCAAACTCCACCTGCCTCCGGGTAT...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCGTTGTTGTATACTCCTaGCTGTGCAGGCGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGVVVYS*LCRRGL
Trigger: CAGCCCACGCCTGCACAGCCAGGAGTATACAACAAC...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATCATGACAGCCTTTGGTaGACGGGCACAGGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYHDSLW*TGTGKA
Trigger: GGCTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATG...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATTGCCTGGGATTGGGATaGGGAGGGCTGCTGATTTCG +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYCLGLG*GGLLIS
Trigger: CGAAATCAGCAGCCCTCCCCATCCCAATCCCAGGCA...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATTACACACAAGCTGCCTaGGATTGGGATGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYYTQAA*DWDGEG
Trigger: GCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTA...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
3UTR CAA 72 bp GGAGAAGGGGTACATATGTGGAGGCAAAATATTCTCTaGAAGCCAACAGATACAGAGTTGCTAGAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: GEGVHMWRQNIL*KPTDTELLEKL
Trigger: CAGCTTCTCTAGCAACTCTGTATCTGTTGGCTTCAAGAGAATATTTTGCCTCCACATATGTACCCCTTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.7
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATATGGTCAAATCTTaGGTTCCAGAGGGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPDMVKS*VPEGSF
Trigger: GAAGCTACCCTCTGGAACTCAAGATTTGACCATATC...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGCCTCTTTTCCGTGCTTaGTGCCAGTGTGTCACATGG +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKPLFRA*CQCVTW
Trigger: CCATGTGACACACTGGCATCAAGCACGGAAAAGAGG...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGCGTCGTGTTGCCTCTTaGGGCCAAGGAACTCCATTT +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKRRVAS*GQGTPF
Trigger: AAATGGAGTTCCTTGGCCTCAAGAGGCAACACGACG...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATCGTCGTGTTGCCTCTTaGGGCCAAGGAACTCCATTT +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNRRVAS*GQGTPF
Trigger: AAATGGAGTTCCTTGGCCTCAAGAGGCAACACGACG...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTACGTCGTGTTGCCTCTTaGGGCCAAGGAACTCCATTT +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLRRVAS*GQGTPF
Trigger: AAATGGAGTTCCTTGGCCTCAAGAGGCAACACGACG...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTAGAACGAGCCACACCATaGGCTGGAGAGATACTAGGA +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLERATP*AGEILG
Trigger: TCCTAGTATCTCTCCAGCTCATGGTGTGGCTCGTTC...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATTGGTGGCAATGTGGATaGACGAGCCACACCATGAGC +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYWWQCG*TSHTMS
Trigger: GCTCATGGTGTGGCTCGTTCATCCACATTGCCACCA...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGGCTGCTATGAAGGTCTaGGCTCTGCTGGCGGTTTAT +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKAAMKV*ALLAVY
Trigger: ATAAACCGCCAGCAGAGCTCAGACCTTCATAGCAGC...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATGCTGCTATGAAGGTCTaGGCTCTGCTGGCGGTTTAT +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNAAMKV*ALLAVY
Trigger: ATAAACCGCCAGCAGAGCTCAGACCTTCATAGCAGC...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATGGGATTACTGCTCTGTaGACTGGCCTGTCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNGITAL*TGLSLV
Trigger: AACCAAGGACAGGCCAGTTCACAGAGCAGTAATCCC...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTGTCTCCTTGGAGACATaGACTGTGCTAGGGATATTC +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSVSLET*TVLGIF
Trigger: GAATATCCCTAGCACAGTTCATGTCTCCAAGGAGAC...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTAGGGACAAGAACCTCCTaGAGAGTTAGCAGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLGTRTS*RVSRGR
Trigger: TCTGCCTCTGCTAACTCTTCAGGAGGTTCTTGTCCC...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTTCTGTCAATGAGCTATaGGAAGAGGGACAAGAACCT +
Preference number: 4 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTSVNEL*EEGQEP
Trigger: AGGTTCTTGTCCCTCTTCTCATAGCTCATTGACAGA...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGAGGCATCGTCCCCAGTaGAGGTTTTTGCCTGACCAT +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKRHRPQ*RFLPDH
Trigger: ATGGTCAGGCAAAAACCTTCACTGGGGACGATGCCT...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATCGGGGGTTCCCCATTTaGACTGGTAGTCCAGATGAG +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYRGFPI*TGSPDE
Trigger: CTCATCTGGACTACCAGTTCAAATGGGGAACCCCCG...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATGGAGAAGAGAACTCTaGGGAGGAGGGATTGGCATC +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKWRREL*GGGIGI
Trigger: GATGCCAATCCCTCCTCCTCAGAGTTCTCTTCTCCA...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCTGGAGAAGAGAACTCTaGGGAGGAGGGATTGGCATC +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGWRREL*GGGIGI
Trigger: GATGCCAATCCCTCCTCCTCAGAGTTCTCTTCTCCA...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTAGCACTTCTGTTCAGATaGTCCCAGGGACACTCTAGG +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLALLFR*SQGHSR
Trigger: CCTAGAGTGTCCCTGGGATCATCTGAACAGAAGTGC...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATGGATGCAGACAAAGGTaGGTGATGGGGGTCTACCTT +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNGCRQR*VMGVYL
Trigger: AAGGTAGACCCCCATCACTCACCTTTGTCTGCATCC...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTAACGTCAGCAAACACCTaGACCTGTTGCACCTGGGTT +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLTSANT*TCCTWV
Trigger: AACCCAGGTGCAACAGGTTCAGGTGTTTGCTGACGT...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395856.3
CDS-3UTR GCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGCCCCCACGTGCAGTATaGTGTAGACGCTCGTATTCA +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKPPRAV*CRRSYS
Trigger: TGAATACGAGCGTCTACAGCATACTGCACGTGGGGG...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTACCCCCACGTGCAGTATaGTGTAGACGCTCGTATTCA +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLPPRAV*CRRSYS
Trigger: TGAATACGAGCGTCTACAGCATACTGCACGTGGGGG...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGTTTGCCTGGGCTGCATaGCCATGCCAGGTGAAAAAG +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKFAWAA*PCQVKK
Trigger: CTTTTTCACCTGGCATGGGCATGCAGCCCAGGCAAA...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATAGAGTTTGCCTGGGCTaGATGCCCATGCCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYRVCLG*MPMPGE
Trigger: TTCACCTGGCATGGGCATGCAGCCCAGGCAAACTCT...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCGGTCTGTTTAGAGTTTaGCTGGGCTGCATGCCCATG +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGGLFRV*LGCMPM
Trigger: CATGGGCATGCAGCCCAGGCAAACTCTAAACAGACC...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGGGTCTGTTTAGAGTTTaGCTGGGCTGCATGCCCATG +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKGLFRV*LGCMPM
Trigger: CATGGGCATGCAGCCCAGGCAAACTCTAAACAGACC...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTATAAGCATGGCTCTTTaGTGCTGTATTAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTISMAL*CCISCL
Trigger: GAGGCAGCTAATACAGCAGCAAAGAGCCATGCTTAT...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCATTGTTCCCAAAGCTTTaGTGCCTCATAAGCATGGCT +
Preference number: 4 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPLFPKL*CLISMA
Trigger: AGCCATGCTTATGAGGCAGCAAAGCTTTGGGAACAA...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTTTGTTCCCAAAGCTTTaGTGCCTCATAAGCATGGCT +
Preference number: 4 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTLFPKL*CLISMA
Trigger: AGCCATGCTTATGAGGCAGCAAAGCTTTGGGAACAA...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCTGCTCACCATGCTGTTaGGGTTGGCCAAGGATGCTT +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGCSPCC*GWPRML
Trigger: AAGCATCCTTGGCCAACCGCAACAGCATGGTGAGCA...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGTTCCTGTCATGCCTCTaGTCACCATGCTGTTGCGGT +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKFLSCL*SPCCCG
Trigger: ACCGCAACAGCATGGTGAGCAGAGGCATGACAGGAA...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATCCTATCGCTCCTTGCTaGCAGGCCTTCATGTCTGGT +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYPIAPC*QAFMSG
Trigger: ACCAGACATGAAGGCCTGGCAGCAAGGAGCGATAGG...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATGGATGAGAGCTGGTTaGAGTAGAGGCCTGTGTGTC +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKWMRAG*SRGLCV
Trigger: GACACACAGGCCTCTACTGCAACCAGCTCTCATCCA...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCACTCTAGGGCAGTATaGTCTAGATCAGCTGGAACA +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSHSRAV*SRSAGT
Trigger: TGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTG...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATGGCAGAGGTAGCTGGTaGAGAATGTCAGGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYGRGSW*RMSGAV
Trigger: GACAGCACCTGACATTCTGCACCAGCTACCTCTGCC...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTGAAAAACTTCACACCTaGGAGACTTCTTTGTTCATA +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDIEKLHT*ETSLFI
Trigger: TATGAACAAAGAAGTCTCCCAGGTGTGAAGTTTTTC...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCACTGCAGTTAAAGGTATaGCTATTTCGTCGTGTTGCC +
Preference number: 4 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPLQLKV*LFRRVA
Trigger: GGCAACACGACGAAATAGCCATACCTTTAACTGCAG...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATTTGGTTCTCGGTCCCTaGCTCATCTGGAGGGTGAAT +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNLVLGP*LIWRVN
Trigger: ATTCACCCTCCAGATGAGCCAGGGACCGAGAACCAA...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCCTGTCTGGCATAAGATaGTTCTCTGCCCTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGLSGIR*FSALRL
Trigger: CAACCTCAGGGCAGAGAACCATCTTATGCCAGACAG...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTATACCATGTTGCTGTTaGATGGTGGCAATGTGGATG +
Preference number: 4 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTIPCCC*MVAMWM
Trigger: CATCCACATTGCCACCATCCAACAGCAACATGGTAT...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTGCTGTAAACTGGCTCTaGGCCTCCAGTTTTATTTCC +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSAVNWL*ASSFIS
Trigger: GGAAATAAAACTGGAGGCCCAGAGCCAGTTTACAGC...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTATATTTAGCCTGGAAGTaGGTCTGGCAGTGGCGGACT +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLYLAWK*VWQWRT
Trigger: AGTCCGCCACTGCCAGACCCACTTCCAGGCTAAATA...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTCCTGGTTGTCCAAATTaGTTATCAATTGCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDIPGCPN*LSIASN
Trigger: ATTGGAAGCAATTGATAACCAATTTGGACAACCAGG...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTCTGATCGCCTGTTCCTaGTTGTCCAAATTGGTTATC +
Preference number: 4 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTLIACS*LSKLVI
Trigger: GATAACCAATTTGGACAACCAGGAACAGGCGATCAG...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATGCCTGACCATGCCTTaGAAAGGGCTAGGGAGATTG +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKCLTMP*KGLGRL
Trigger: CAATCTCCCTAGCCCTTTCCAAGGCATGGTCAGGCA...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATGTTTAGAGTTTGCCTaGGCTGCATGCCCATGCCAG +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKCLEFA*AACPCQ
Trigger: CTGGCATGGGCATGCAGCCCAGGCAAACTCTAAACA...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGTGTTTAGAGTTTGCCTaGGCTGCATGCCCATGCCAG +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKCLEFA*AACPCQ
Trigger: CTGGCATGGGCATGCAGCCCAGGCAAACTCTAAACA...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATAGGGGAATTGCTGTaGAGCACCCTGAGGAAGACG +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNIGELL*STLRKT
Trigger: CGTCTTCCTCAGGGTGCTCCACAGCAATTCCCCTAT...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAAATAGGGGAATTGCTGTaGAGCACCCTGAGGAAGACG +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKIGELL*STLRKT
Trigger: CGTCTTCCTCAGGGTGCTCCACAGCAATTCCCCTAT...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTAGCAGGTGGGGTTCCTaGATTTGTACCATAGTTTGG +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSSRWGS*ICTIVW
Trigger: CCAAACTATGGTACAAATCCAGGAACCCCACCTGCT...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGGCTGGTAGAAGCAGGTaGGGTTCCTGGATTTGTACC +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKAGRSR*GSWICT
Trigger: GGTACAAATCCAGGAACCCCACCTGCTTCTACCAGC...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCCCATGCTGTTGCGGTTaGCCAAGGATGCTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGPCCCG*PRMLQD
Trigger: ATCCTGAAGCATCCTTGGCCAACCGCAACAGCATGG...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGGAGATGGAGCAAAGTTaGCCTCACCTTGGGGAACCA +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKEMEQS*PHLGEP
Trigger: TGGTTCCCCAAGGTGAGGCCAACTTTGCTCCATCTC...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCGAGATGGAGCAAAGTTaGCCTCACCTTGGGGAACCA +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGEMEQS*PHLGEP
Trigger: TGGTTCCCCAAGGTGAGGCCAACTTTGCTCCATCTC...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAAGAGATGGAGCAAAGTTaGCCTCACCTTGGGGAACCA +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKEMEQS*PHLGEP
Trigger: TGGTTCCCCAAGGTGAGGCCAACTTTGCTCCATCTC...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCCTTTTGAGTTCCCAGTaGACCAGGCTGGTTCAGGTA +
Preference number: 4 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGLLSSQ*TRLVQV
Trigger: TACCTGAACCAGCCTGGTCCACTGGGAACTCAAAAG...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGACACATGACAGCCTTTaGTGGACGGGCACAGGCAAA +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKTHDSL*WTGTGK
Trigger: TTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGT...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAACGAGGCCACTCATGTTaGAAAACTTCACACCTGGGA +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKRGHSC*KTSHLG
Trigger: TCCCAGGTGTGAAGTTTTTCAACATGAGTGGCCTCG...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTATCCTTTCCTCTTATGTaGGTCTGGGTTAGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLSFPLM*VWVSRV
Trigger: GACCCTGCTAACCCAGACTCACATAAGAGGAAAGGA...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGCTGGTTACATTCTCTaGCACAAATACAATTCTCCC +
Preference number: 4 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTAGYIL*HKYNSP
Trigger: GGGAGAATTGTATTTGTGTCAGAGAATGTAACCAGC...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAAGGCTCATCTGGAGGGTaGATTAGCATCCTGCAGTTA +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKGSSGG*ISILQL
Trigger: TAACTGCAGGATGCTAATTCACCCTCCAGATGAGCC...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATGCTGCTATGAAGGTCTaGGCTCTGCTGGCGGTTTAT +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYAAMKV*ALLAVY
Trigger: ATAAACCGCCAGCAGAGCTCAGACCTTCATAGCAGC...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAAAATCTGACTTCCGGGTaGGCATCCGAAACTTCCTTG +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKNLTSG*ASETSL
Trigger: CAAGGAAGTTTCGGATGCTCACCCGGAAGTCAGATT...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATAATCTGACTTCCGGGTaGGCATCCGAAACTTCCTTG +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNNLTSG*ASETSL
Trigger: CAAGGAAGTTTCGGATGCTCACCCGGAAGTCAGATT...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATGTTATGCAGAAGCCCTaGATCCAGAGGTTTGCCATC +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNVMQKP*IQRFAI
Trigger: GATGGCAAACCTCTGGATTCAGGGCTTCTGCATAAC...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGAGCGTGGGCAGTAACTaGTCAAACTGGTCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKSVGSN*SNWSRS
Trigger: TGACCTTGACCAGTTTGATCAGTTACTGCCCACGCT...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCAATCGCTGCTGTAGTTaGAGTCGAAGCTGGTTAGGT +
Preference number: 4 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGNRCCS*SRSWLG
Trigger: ACCTAACCAGCTTCGACTTCAACTACAGCAGCGATT...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGGCTGCATCTGAGGATTaGTTCCAGTGCCAAACTGTC +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKAASED*FQCQTV
Trigger: GACAGTTTGGCACTGGAATCAATCCTCAGATGCAGC...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCACATTCTGCTGCATCTaGGGATTGATTCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGTFCCI*GLIPVP
Trigger: TGGCACTGGAATCAATCCTCAGATGCAGCAGAATGT...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCATGGTTCTGGACAGCTTaGCTGAACACATTGTTGTTT +
Preference number: 4 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPWFWTA*LNTLLF
Trigger: AAACAACAATGTGTTCAGTCAAGCTGTCCAGAACCA...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCATCTGCTTCTGTTTTaGGAAGGTCAGTGGATGAGA +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSHLLLF*EGQWMR
Trigger: TCTCATCCACTGACCTTCTCAAAACAGAAGCAGATG...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCACGTCAGCAAACACCTaGACCTGTTGCACCTGTAGA +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGTSANT*TCCTCR
Trigger: TCTACAGGTGCAACAGGTTCAGGTGTTTGCTGACGT...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
CDS-3UTR GCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTATTCTTCACAAATTCTaGATGATCCCCCACGTGCAG +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSILHKF*MIPHVQ
Trigger: CTGCACGTGGGGGATCATGCAGAATTTGTGAAGAAT...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGGCTATTTCGTCGTGTTaGCTCTTGAGGCCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKAISSC*LLRPRN
Trigger: GTTCCTTGGCCTCAAGAGGCAACACGACGAAATAGC...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGTTCTGTGAGCTCATCTaGCTGAGGACTGGAGAACTG +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKFCELI*LRTGEL
Trigger: CAGTTCTCCAGTCCTCAGGCAGATGAGCTCACAGAA...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATCAGCATGCCGTAACTaGTGTTCGGCAGTTGTTGTC +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKSACRN*CSAVVV
Trigger: GACAACAACTGCCGAACAGCAGTTACGGCATGCTGA...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCAGGCAGAGTTGGAAGTaGCTGTGCAAGACAGGACAT +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGRQSWK*LCKTGH
Trigger: ATGTCCTGTCTTGCACAGGCACTTCCAACTCTGCCT...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCTTCCCGCTGACGTTGTaGCAACATTTGAGCATTCAG +
Preference number: 4 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGFPLTL*QHLSIQ
Trigger: CTGAATGCTCAAATGTTGGCACAACGTCAGCGGGAA...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATTTTCCTATCGCTCCTTaGTGCCAGGCCTTCATGTCT +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNFPIAP*CQAFMS
Trigger: AGACATGAAGGCCTGGCAGCAAGGAGCGATAGGAAA...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCGCGGGATCATTTATCTaGTCAGGGCACACAGTGTTC +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGAGSFI*SGHTVF
Trigger: GAACACTGTGTGCCCTGAGCAGATAAATGATCCCGC...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGGCGGGATCATTTATCTaGTCAGGGCACACAGTGTTC +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKAGSFI*SGHTVF
Trigger: GAACACTGTGTGCCCTGAGCAGATAAATGATCCCGC...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATGCGGGATCATTTATCTaGTCAGGGCACACAGTGTTC +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNAGSFI*SGHTVF
Trigger: GAACACTGTGTGCCCTGAGCAGATAAATGATCCCGC...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCCTGTCTGGCATAAGATaGTTCTCTGCCCTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGLSGIR*FSALRL
Trigger: CAACCTCAGGGCAGAGAACCATCTTATGCCAGACAG...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCAGTTTACACTTGGTGTaGGCGCTAAGCATTGTCCCA +
Preference number: 4 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGSLHLV*ALSIVP
Trigger: TGGGACAATGCTTAGCGCCCACACCAAGTGTAAACT...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTGAAAGGTTGCATGTCTaGACTTTGAGGGTAGCAAAG +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSERLHV*TLRVAK
Trigger: CTTTGCTACCCTCAAAGTCCAGACATGCAACCTTTC...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTGGTTTAAGGCAACATTaGCTACAATCTGACTTCCGG +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSGLRQH*LQSDFR
Trigger: CCGGAAGTCAGATTGTAGCCAATGTTGCCTTAAACC...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCGAACTGGCCTGTCCTTaGTTTAAGGCAACATTGGCT +
Preference number: 4 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGELACP*FKATLA
Trigger: AGCCAATGTTGCCTTAAACCAAGGACAGGCCAGTTC...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCAGGAAAGGAATTGTTTaGCATCCTGGGCCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGRKGIV*HPGPCC
Trigger: GCAACAAGGCCCAGGATGCCAAACAATTCCTTTCCT...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAAGTGGGTTTGGTCATTaGGGTTGGGTTTGTATTACA +
Preference number: 4 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPSGFGH*GWVCIT
Trigger: TGTAATACAAACCCAACCCCAATGACCAAACCCACT...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATCCTCAGGAGTGGGTTTaGTCATTGGGGTTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYPQEWV*SLGLGL
Trigger: CAAACCCAACCCCAATGACCAAACCCACTCCTGAGG...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAAAGGTCAGCTGTAAACTaGCTCTGGGCCTCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKRSAVN*LWASSF
Trigger: AAAACTGGAGGCCCAGAGCCAGTTTACAGCTGACCT...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTACTGCCTTCTCCAGCGTaGGCAGTAACTGATCAAACT +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLLPSPA*AVTDQT
Trigger: AGTTTGATCAGTTACTGCCCACGCTGGAGAAGGCAG...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAACTGCCTTCTCCAGCGTaGGCAGTAACTGATCAAACT +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKLPSPA*AVTDQT
Trigger: AGTTTGATCAGTTACTGCCCACGCTGGAGAAGGCAG...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCGTAATCTATTTAGCCTaGAAGTGGGTCTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGVIYLA*KWVWQW
Trigger: CCACTGCCAGACCCACTTCCAGGCTAAATAGATTAC...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCTGATCGCCTGTTCCTaGTTGTCCAAATTGGTTATC +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSLIACS*LSKLVI
Trigger: GATAACCAATTTGGACAACCAGGAACAGGCGATCAG...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCTCCCTTCTACTGTTGTaGGTGGACAGAGAAGCTCAT +
Preference number: 4 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGSLLLL*VDREAH
Trigger: ATGAGCTTCTCTGTCCACCCACAACAGTAGAAGGGA...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTTGTACCATAGTTTGGTaGATAGGGGAATTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSCTIVW*IGELLW
Trigger: CCACAGCAATTCCCCTATCCACCAAACTATGGTACA...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTACCTGCTCCTGGATACTaGAAGACATTCTGCTGCATC +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLPAPGY*KTFCCI
Trigger: GATGCAGCAGAATGTCTTCCAGTATCCAGGAGCAGG...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATGAGATGGAGCAAAGTTaGCCTCACCTTGGGGAACCA +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYEMEQS*PHLGEP
Trigger: TGGTTCCCCAAGGTGAGGCCAACTTTGCTCCATCTC...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATATACCCGGAGGCAGGTaGAGTTTGCTGGAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYIPGGR*SLLEKR
Trigger: TCTCTTCTCCAGCAAACTCCACCTGCCTCCGGGTAT...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTTCTGTCTTCTTGTCCTaGGTTCCATCTGCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSSVFLS*VPSASV
Trigger: AACAGAAGCAGATGGAACCCAGGACAAGAAGACAGA...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGCTTTTGAGTTCCCAGTaGACCAGGCTGGTTCAGGTA +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKLLSSQ*TRLVQV
Trigger: TACCTGAACCAGCCTGGTCCACTGGGAACTCAAAAG...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATTCTGTGGTCCTGACGTaGGCTTTTGAGTTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYSVVLT*AFEFPV
Trigger: CACTGGGAACTCAAAAGCCCACGTCAGGACCACAGA...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATACACATGACAGCCTTTaGTGGACGGGCACAGGCAAA +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYTHDSL*WTGTGK
Trigger: TTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGT...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTTTCCTGGAGGCATCTTaGTTTAAATCCATCTTTAAA +
Preference number: 4 (lower is better)
Translates to: SRAVCSRSAGTALSGSDIFLEAS*FKSIFK
Trigger: TTTAAAGATGGATTTAAACCAAGATGCCTCCAGGAA...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTATTCACAAATTCTGCATaGTCCCCCACGTGCAGTATG +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLFTNSA*SPTCSM
Trigger: CATACTGCACGTGGGGGATCATGCAGAATTTGTGAA...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCTCCCATCATTCAATATaGATCTATAGGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGSHHSI*IYRRGW
Trigger: CCAGCCCCTCCTATAGATTCATATTGAATGATGGGA...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTTCCCTGTCGATGATATaGATTCCCATGATGAAAGGT +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSSLSMI*IPMMKG
Trigger: ACCTTTCATCATGGGAATTCATATCATCGACAGGGA...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAAGAATTAGTGTCATCTTaGGGAGAAAGCCCACTGTGC +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKELVSS*GESPLC
Trigger: GCACAGTGGGCTTTCTCCTCAAGATGACACTAATTC...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCGTCTCCTTGGAGACATaGACTGTGCTAGGGATATTC +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGVSLET*TVLGIF
Trigger: GAATATCCCTAGCACAGTTCATGTCTCCAAGGAGAC...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTAGTCTCCTTGGAGACATaGACTGTGCTAGGGATATTC +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLVSLET*TVLGIF
Trigger: GAATATCCCTAGCACAGTTCATGTCTCCAAGGAGAC...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATGTCTCCTTGGAGACATaGACTGTGCTAGGGATATTC +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNVSLET*TVLGIF
Trigger: GAATATCCCTAGCACAGTTCATGTCTCCAAGGAGAC...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCATGCCGTTCTGTCAATaGGCTATGAGAAGAGGGACA +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGMPFCQ*AMRRGT
Trigger: TGTCCCTCTTCTCATAGCTCATTGACAGAACGGCAT...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGATGCCGTTCTGTCAATaGGCTATGAGAAGAGGGACA +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKMPFCQ*AMRRGT
Trigger: TGTCCCTCTTCTCATAGCTCATTGACAGAACGGCAT...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCTACCTGTCCAGTCACTaGCACAGAAGTAGATGCACT +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGYLSSH*HRSRCT
Trigger: AGTGCATCTACTTCTGTGTCAGTGACTGGACAGGTA...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATAGCGTGGGCAGTAACTaGTCAAACTGGTCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYSVGSN*SNWSRS
Trigger: TGACCTTGACCAGTTTGATCAGTTACTGCCCACGCT...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATTTTGTCCATGGAATCTaGTCGCCTGTTCCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNFVHGI*SPVPGC
Trigger: ACAACCAGGAACAGGCGATCAGATTCCATGGACAAA...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCTTTGTCCATGGAATCTaGTCGCCTGTTCCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGFVHGI*SPVPGC
Trigger: ACAACCAGGAACAGGCGATCAGATTCCATGGACAAA...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGTGGGTCTTTCTTCCATaGTCAAAGGTGGCGTTGCTT +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKWVFLP*SKVALL
Trigger: AAGCAACGCCACCTTTGATCATGGAAGAAAGACCCA...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATAATCGCTGCTGTAGTTaGAGTCGAAGCTGGTTAGGT +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNNRCCS*SRSWLG
Trigger: ACCTAACCAGCTTCGACTTCAACTACAGCAGCGATT...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTAAATCGCTGCTGTAGTTaGAGTCGAAGCTGGTTAGGT +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLNRCCS*SRSWLG
Trigger: ACCTAACCAGCTTCGACTTCAACTACAGCAGCGATT...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCTTGCTGTTGCATGCCTaGTCTCATATTGATGCCAAC +
Preference number: 4 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGLLLHA*SHIDAN
Trigger: GTTGGCATCAATATGAGATCAGGCATGCAACAGCAA...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCACATTCTGCTGCATCTaGGGATTGATTCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGTFCCI*GLIPVP
Trigger: TGGCACTGGAATCAATCCTCAGATGCAGCAGAATGT...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATACATTCTGCTGCATCTaGGGATTGATTCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNTFCCI*GLIPVP
Trigger: TGGCACTGGAATCAATCCTCAGATGCAGCAGAATGT...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGACATTCTGCTGCATCTaGGGATTGATTCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKTFCCI*GLIPVP
Trigger: TGGCACTGGAATCAATCCTCAGATGCAGCAGAATGT...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTTCTGGACAGCTTGACTaGACACATTGTTGTTTCCTA +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSSGQLD*THCCFL
Trigger: TAGGAAACAACAATGTGTTCAGTCAAGCTGTCCAGA...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAATTGGGTTCATGTTCTaGACATTCGTATTTCCACCT +
Preference number: 4 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPIGFMF*TFVFPP
Trigger: AGGTGGAAATACGAATGTTCAGAACATGAACCCAAT...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGGCAAAATATTCTCTTaGAGCCAACAGATACAGAGT +
Preference number: 4 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPGKIFS*SQQIQS
Trigger: ACTCTGTATCTGTTGGCTTCAAGAGAATATTTTGCC...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTCTGGCAGTGACATTTTaGTTTGAACCCCAAAGTAAA +
Preference number: 4 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTLAVTF*FEPQSK
Trigger: TTTACTTTGGGGTTCAAATCAAAATGTCACTGCCAG...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCACTGCATGATCTTGCTTaGTGGTCCTTGATTTTATCA +
Preference number: 4 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPLHDLA*WSLILS
Trigger: TGATAAAATCAAGGACCATCAAGCAAGATCATGCAG...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAAAGGCACTACTTGTCATaGCAACGGGAGAGCTTAATG +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKRHYLS*QRESLM
Trigger: CATTAAGCTCTCCCGTTGGCATGACAAGTAGTGCCT...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATAGGCACTACTTGTCATaGCAACGGGAGAGCTTAATG +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNRHYLS*QRESLM
Trigger: CATTAAGCTCTCCCGTTGGCATGACAAGTAGTGCCT...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATTTCTGTGAGCTCATCTaGCTGAGGACTGGAGAACTG +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYFCELI*LRTGEL
Trigger: CAGTTCTCCAGTCCTCAGGCAGATGAGCTCACAGAA...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATGTGTCTATATCAGCATaGCGTAACTGCTGTTCGGCA +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNVSISA*RNCCSA
Trigger: TGCCGAACAGCAGTTACGGCATGCTGATATAGACAC...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGAGTTGGAAGTGCCTGTaGAAGACAGGACATCTTTGC +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKSWKCL*KTGHLC
Trigger: GCAAAGATGTCCTGTCTTGCACAGGCACTTCCAACT...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTAAGTTGGAAGTGCCTGTaGAAGACAGGACATCTTTGC +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLSWKCL*KTGHLC
Trigger: GCAAAGATGTCCTGTCTTGCACAGGCACTTCCAACT...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCACGGTGTAGAATTTTATaGCGTTCTGTCAATGAGCTA +
Preference number: 4 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPRCRIL*RSVNEL
Trigger: TAGCTCATTGACAGAACGGCATAAAATTCTACACCG...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCCCCAGTGAAGGTTTTTaGCTGACCATGCCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGPSEGF*LTMPWK
Trigger: TTTCCAAGGCATGGTCAGGCAAAAACCTTCACTGGG...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAACCCAGTGAAGGTTTTTaGCTGACCATGCCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKPSEGF*LTMPWK
Trigger: TTTCCAAGGCATGGTCAGGCAAAAACCTTCACTGGG...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATCCCAGTGAAGGTTTTTaGCTGACCATGCCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNPSEGF*LTMPWK
Trigger: TTTCCAAGGCATGGTCAGGCAAAAACCTTCACTGGG...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCTTCCCGCTGACGTTGTaGCAACATTTGAGCATTCAG +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGFPLTL*QHLSIQ
Trigger: CTGAATGCTCAAATGTTGGCACAACGTCAGCGGGAA...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATAGCATGGCTCTTTGCTaGTGTATTAGCTGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNSMALC*CISCLC
Trigger: ACAGAGGCAGCTAATACAGCAGCAAAGAGCCATGCT...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATCTATGTTTCCTGTCATaGCTCTGCTCACCATGCTGT +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNLCFLS*LCSPCC
Trigger: ACAGCATGGTGAGCAGAGGCATGACAGGAAACATAG...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATCTGCTGGGTTCCATCTaGTTCTGTTTTGAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNLLGSI*FCFEKV
Trigger: GACCTTCTCAAAACAGAAGCAGATGGAACCCAGCAG...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000406961.5
CDS-3UTR GCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTACACCTGGGTTCCATCTaGTTCTGTTTTGAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLHLGSI*FCFEKV
Trigger: GACCTTCTCAAAACAGAAGCAGATGGAACCCAGGTG...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395856.3
CDS-3UTR CCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTATGCCAGTGTGTCACATaGCGATCCTTTCCTCTTATG +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLCQCVT*RSFPLM
Trigger: CATAAGAGGAAAGGATCGCCATGTGACACACTGGCA...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATGCCAGTGTGTCACATaGCGATCCTTTCCTCTTATG +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKCQCVT*RSFPLM
Trigger: CATAAGAGGAAAGGATCGCCATGTGACACACTGGCA...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATCTGTCTGGCATAAGATaGTTCTCTGCCCTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYLSGIR*FSALRL
Trigger: CAACCTCAGGGCAGAGAACCATCTTATGCCAGACAG...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAACTTGGAACAGCTGTCTaGCATAAGATGGTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKLGTAV*HKMVLC
Trigger: GCAGAGAACCATCTTATGCCAGACAGCTGTTCCAAG...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATAGTTTACACTTGGTGTaGGCGCTAAGCATTGTCCCA +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNSLHLV*ALSIVP
Trigger: TGGGACAATGCTTAGCGCCCACACCAAGTGTAAACT...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAAAGCCACACCATGAGCTaGAGAGATACTAGGATTGAC +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKSHTMS*RDTRID
Trigger: GTCAATCCTAGTATCTCTCCAGCTCATGGTGTGGCT...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCAGCCACACCATGAGCTaGAGAGATACTAGGATTGAC +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGSHTMS*RDTRID
Trigger: GTCAATCCTAGTATCTCTCCAGCTCATGGTGTGGCT...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCATACCATGTTGCTGTTaGATGGTGGCAATGTGGATG +
Preference number: 4 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGIPCCC*MVAMWM
Trigger: CATCCACATTGCCACCATCCAACAGCAACATGGTAT...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTAGGCGGTTTATTCTGGTaGATACCATGTTGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLGGLFW*IPCCCW
Trigger: CCAACAGCAACATGGTATCCACCAGAATAAACCGCC...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGGCTGGCGGTTTATTCTaGTGGATACCATGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKAGGLF*WIPCCC
Trigger: ACAGCAACATGGTATCCACCAGAATAAACCGCCAGC...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATAGGTCTGAGCTCTGCTaGCGGTTTATTCTGGTGGAT +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYRSELC*RFILVD
Trigger: ATCCACCAGAATAAACCGCCAGCAGAGCTCAGACCT...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTCATCCGAAACTTCCTTaGCTGTTGCTAGAATTACTA +
Preference number: 4 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTHPKLP*LLLELL
Trigger: TAGTAATTCTAGCAACAGCCAAGGAAGTTTCGGATG...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGGAACTGGCCTGTCCTTaGTTTAAGGCAACATTGGCT +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKELACP*FKATLA
Trigger: AGCCAATGTTGCCTTAAACCAAGGACAGGCCAGTTC...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAAGAACTGGCCTGTCCTTaGTTTAAGGCAACATTGGCT +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKELACP*FKATLA
Trigger: AGCCAATGTTGCCTTAAACCAAGGACAGGCCAGTTC...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATTACTGCTCTGTGAACTaGCCTGTCCTTGGTTTAAGG +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNYCSVN*PVLGLR
Trigger: CCTTAAACCAAGGACAGGCCAGTTCACAGAGCAGTA...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTATACTGCTCTGTGAACTaGCCTGTCCTTGGTTTAAGG +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLYCSVN*PVLGLR
Trigger: CCTTAAACCAAGGACAGGCCAGTTCACAGAGCAGTA...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCAATTGTTTGGCATCCTaGGCCTTGTTGCCAATCCAG +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGNCLAS*ALLPIQ
Trigger: CTGGATTGGCAACAAGGCCCAGGATGCCAAACAATT...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAAAATTGTTTGGCATCCTaGGCCTTGTTGCCAATCCAG +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKNCLAS*ALLPIQ
Trigger: CTGGATTGGCAACAAGGCCCAGGATGCCAAACAATT...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTAAGGAAAGGAATTGTTTaGCATCCTGGGCCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLRKGIV*HPGPCC
Trigger: GCAACAAGGCCCAGGATGCCAAACAATTCCTTTCCT...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTTTTGGTCATTGGGGTTaGGTTTGTATTACATGGATC +
Preference number: 4 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTFGHWG*VCITWI
Trigger: GATCCATGTAATACAAACCCAACCCCAATGACCAAA...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTAGTGGGTTTGGTCATTaGGGTTGGGTTTGTATTACA +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSSGFGH*GWVCIT
Trigger: TGTAATACAAACCCAACCCCAATGACCAAACCCACT...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTAGCTGTAAACTGGCTCTaGGCCTCCAGTTTTATTTCC +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLAVNWL*ASSFIS
Trigger: GGAAATAAAACTGGAGGCCCAGAGCCAGTTTACAGC...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCGTAATCTATTTAGCCTaGAAGTGGGTCTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGVIYLA*KWVWQW
Trigger: CCACTGCCAGACCCACTTCCAGGCTAAATAGATTAC...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGTCCCTTCTACTGTTGTaGGTGGACAGAGAAGCTCAT +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKSLLLL*VDREAH
Trigger: ATGAGCTTCTCTGTCCACCCACAACAGTAGAAGGGA...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATTCCCTTCTACTGTTGTaGGTGGACAGAGAAGCTCAT +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNSLLLL*VDREAH
Trigger: ATGAGCTTCTCTGTCCACCCACAACAGTAGAAGGGA...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATTCCATGATCAAAGGTaGCGTTGCTTGTTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKFHDQR*RCLLWW
Trigger: CCACCACAACAAGCAACGCCACCTTTGATCATGGAA...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGTTCCATGATCAAAGGTaGCGTTGCTTGTTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKFHDQR*RCLLWW
Trigger: CCACCACAACAAGCAACGCCACCTTTGATCATGGAA...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAATAGCTTGCCGATTTTaGTGTATCAACTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPIACRF*CINCCC
Trigger: ACAACAGCAGTTGATACACCAAAATCGGCAAGCTAT...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCTTGAGCATTCAGGGGTaGCTGAGGTGTAATTTGCTG +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGLSIQG*LRCNLL
Trigger: CAGCAAATTACACCTCAGCCACCCCTGAATGCTCAA...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCTGTACCATAGTTTGGTaGATAGGGGAATTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGCTIVW*IGELLW
Trigger: CCACAGCAATTCCCCTATCCACCAAACTATGGTACA...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCAGCAGGTGGGGTTCCTaGATTTGTACCATAGTTTGG +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGSRWGS*ICTIVW
Trigger: CCAAACTATGGTACAAATCCAGGAACCCCACCTGCT...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATAGCAGGTGGGGTTCCTaGATTTGTACCATAGTTTGG +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNSRWGS*ICTIVW
Trigger: CCAAACTATGGTACAAATCCAGGAACCCCACCTGCT...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTAGATATGGTCAAATCTTaGGTTCCAGAGGGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLDMVKS*VPEGSF
Trigger: GAAGCTACCCTCTGGAACTCAAGATTTGACCATATC...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGTCCCATCATTCAATATaGATCTATAGGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKSHHSI*IYRRGW
Trigger: CCAGCCCCTCCTATAGATTCATATTGAATGATGGGA...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATGAATTAGTGTCATCTTaGGGAGAAAGCCCACTGTGC +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYELVSS*GESPLC
Trigger: GCACAGTGGGCTTTCTCCTCAAGATGACACTAATTC...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGTCTGTCAATGAGCTATaGGAAGAGGGACAAGAACCT +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKSVNEL*EEGQEP
Trigger: AGGTTCTTGTCCCTCTTCTCATAGCTCATTGACAGA...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATATGCCGTTCTGTCAATaGGCTATGAGAAGAGGGACA +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYMPFCQ*AMRRGT
Trigger: TGTCCCTCTTCTCATAGCTCATTGACAGAACGGCAT...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATTGGGTCTTTCTTCCATaGTCAAAGGTGGCGTTGCTT +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYWVFLP*SKVALL
Trigger: AAGCAACGCCACCTTTGATCATGGAAGAAAGACCCA...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATTGCCTGATCTCATATTaGTGCCAACAGGAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYCLISY*CQQEQL
Trigger: CAACTGCTCCTGTTGGCATCAATATGAGATCAGGCA...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATTGCTGTTGCATGCCTaGTCTCATATTGATGCCAAC +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKLLLHA*SHIDAN
Trigger: GTTGGCATCAATATGAGATCAGGCATGCAACAGCAA...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGTTGCTGTTGCATGCCTaGTCTCATATTGATGCCAAC +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKLLLHA*SHIDAN
Trigger: GTTGGCATCAATATGAGATCAGGCATGCAACAGCAA...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCTGGTTCTGGACAGCTTaGCTGAACACATTGTTGTTT +
Preference number: 4 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGWFWTA*LNTLLF
Trigger: AAACAACAATGTGTTCAGTCAAGCTGTCCAGAACCA...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATCATCTGCTTCTGTTTTaGGAAGGTCAGTGGATGAGA +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNHLLLF*EGQWMR
Trigger: TCTCATCCACTGACCTTCTCAAAACAGAAGCAGATG...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTAAGCTCTTTCTGGCAGTaGCATTTTGATTTGAACCCC +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLSSFWQ*HFDLNP
Trigger: GGGGTTCAAATCAAAATGTCACTGCCAGAAAGAGCT...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGAGCTCTTTCTGGCAGTaGCATTTTGATTTGAACCCC +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKSSFWQ*HFDLNP
Trigger: GGGGTTCAAATCAAAATGTCACTGCCAGAAAGAGCT...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTAAAGTTGCCTACTGCATaGTCTTGCTTGATGGTCCTT +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLKLPTA*SCLMVL
Trigger: AAGGACCATCAAGCAAGATCATGCAGTAGGCAACTT...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAAATTCTTCACAAATTCTaGATGATCCCCCACGTGCAG +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKILHKF*MIPHVQ
Trigger: CTGCACGTGGGGGATCATGCAGAATTTGTGAAGAAT...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATTGGTGGATACCATGTTaGTGTTGGATGGTGGCAATG +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYWWIPC*CWMVAM
Trigger: CATTGCCACCATCCAACAGCAACATGGTATCCACCA...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATTTAAAGAGGGATTACTaGTCTGTGAACTGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNLKRDY*SVNWPV
Trigger: GACAGGCCAGTTCACAGAGCAGTAATCCCTCTTTAA...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATTAAAGAGGGATTACTaGTCTGTGAACTGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKLKRDY*SVNWPV
Trigger: GACAGGCCAGTTCACAGAGCAGTAATCCCTCTTTAA...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATGTGTCTATATCAGCATaGCGTAACTGCTGTTCGGCA +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYVSISA*RNCCSA
Trigger: TGCCGAACAGCAGTTACGGCATGCTGATATAGACAC...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAAAATTGGTTATCAATTaGTTCCAATTCCAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPKLVIN*FQFQLR
Trigger: CCTGAGCTGGAATTGGAAGCAATTGATAACCAATTT...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTAAATTGGTTATCAATTaGTTCCAATTCCAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTKLVIN*FQFQLR
Trigger: CCTGAGCTGGAATTGGAAGCAATTGATAACCAATTT...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGGATCAAAGGTGGCGTTaGTTGTTGTGGTGGAAATCT +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKDQRWR*LLWWKS
Trigger: AGATTTCCACCACAACAAGCAACGCCACCTTTGATC...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTTGGTTTAAGATAGCTTaGCGATTTTGGTGTATCAAC +
Preference number: 4 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTWFKIA*RFWCIN
Trigger: GTTGATACACCAAAATCGGCAAGCTATCTTAAACCA...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATAAGCATGGCTCTTTaGTGCTGTATTAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNISMAL*CCISCL
Trigger: GAGGCAGCTAATACAGCAGCAAAGAGCCATGCTTAT...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAAATAAGCATGGCTCTTTaGTGCTGTATTAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKISMAL*CCISCL
Trigger: GAGGCAGCTAATACAGCAGCAAAGAGCCATGCTTAT...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATTTCCCAAAGCTTTGCTaGCTCATAAGCATGGCTCTT +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNFPKLC*LISMAL
Trigger: AAGAGCCATGCTTATGAGGCAGCAAAGCTTTGGGAA...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCTTCCCAAAGCTTTGCTaGCTCATAAGCATGGCTCTT +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGFPKLC*LISMAL
Trigger: AAGAGCCATGCTTATGAGGCAGCAAAGCTTTGGGAA...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTAATTCGTATTTCCACCTaGCATGGAAACGGTGATGCT +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLIRIST*HGNGDA
Trigger: AGCATCACCGTTTCCATGGCAGGTGGAAATACGAAT...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTATTCATTCCTGGCATCTaGAAAGAGCTCATCTGCATC +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLFIPGI*KELICI
Trigger: GATGCAGATGAGCTCTTTGCAGATGCCAGGAATGAA...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGAAAAACTTCACACCTaGGAGACTTCTTTGTTCATA +
Preference number: 4 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTEKLHT*ETSLFI
Trigger: TATGAACAAAGAAGTCTCCCAGGTGTGAAGTTTTTC...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTAATCTTGCATTTGTCTaGTTTTACACTCAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTNLAFV*FYTQAV
Trigger: GACAGCTTGAGTGTAAAACCAGACAAATGCAAGATT...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATAGTTTACACTTGGTGTaGGCGCTAAGCATTGTCCCA +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYSLHLV*ALSIVP
Trigger: TGGGACAATGCTTAGCGCCCACACCAAGTGTAAACT...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGGAAAGGTTGCATGTCTaGACTTTGAGGGTAGCAAAG +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKERLHV*TLRVAK
Trigger: CTTTGCTACCCTCAAAGTCCAGACATGCAACCTTTC...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCATCCGAAACTTCCTTaGCTGTTGCTAGAATTACTA +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSHPKLP*LLLELL
Trigger: TAGTAATTCTAGCAACAGCCAAGGAAGTTTCGGATG...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCGGTTTAAGGCAACATTaGCTACAATCTGACTTCCGG +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGGLRQH*LQSDFR
Trigger: CCGGAAGTCAGATTGTAGCCAATGTTGCCTTAAACC...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATGGTTTAAGGCAACATTaGCTACAATCTGACTTCCGG +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNGLRQH*LQSDFR
Trigger: CCGGAAGTCAGATTGTAGCCAATGTTGCCTTAAACC...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATGAACTGGCCTGTCCTTaGTTTAAGGCAACATTGGCT +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYELACP*FKATLA
Trigger: AGCCAATGTTGCCTTAAACCAAGGACAGGCCAGTTC...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCAGCCAACGGAGTTATTaGGTCCTTCATTCATACCCT +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGSQRSY*VLHSYP
Trigger: AGGGTATGAATGAAGGACCCAATAACTCCGTTGGCT...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTAAGCCAACGGAGTTATTaGGTCCTTCATTCATACCCT +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLSQRSY*VLHSYP
Trigger: AGGGTATGAATGAAGGACCCAATAACTCCGTTGGCT...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTTTTGGTCATTGGGGTTaGGTTTGTATTACATGGATC +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSFGHWG*VCITWI
Trigger: GATCCATGTAATACAAACCCAACCCCAATGACCAAA...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAACTGATCGCCTGTTCCTaGTTGTCCAAATTGGTTATC +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKLIACS*LSKLVI
Trigger: GATAACCAATTTGGACAACCAGGAACAGGCGATCAG...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTTGTATTATTTGTCCATaGAATCTGATCGCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSCIICP*NLIACS
Trigger: GGAACAGGCGATCAGATTCCATGGACAAATAATACA...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATTCCCTTCTACTGTTGTaGGTGGACAGAGAAGCTCAT +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYSLLLL*VDREAH
Trigger: ATGAGCTTCTCTGTCCACCCACAACAGTAGAAGGGA...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATTTCCATGATCAAAGGTaGCGTTGCTTGTTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYFHDQR*RCLLWW
Trigger: CCACCACAACAAGCAACGCCACCTTTGATCATGGAA...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTATAGCTTGCCGATTTTaGTGTATCAACTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSIACRF*CINCCC
Trigger: ACAACAGCAGTTGATACACCAAAATCGGCAAGCTAT...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCTCTGTCTTCTTGTCCTaGGTTCCATCTGCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGSVFLS*VPSASV
Trigger: AACAGAAGCAGATGGAACCCAGGACAAGAAGACAGA...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
CDS-3UTR CCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTGCTTCATCTTCTTCTTaGAACTTGTCGTTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSASSSS*NLSFWF
Trigger: GAACCAAAACGACAAGTTCCAAGAAGAAGATGAAGC...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGTTGGCTGTGACACAGTaGAACACTGCATTACTTCAT +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKLAVTQ*NTALLH
Trigger: ATGAAGTAATGCAGTGTTTCACTGTGTCACAGCCAA...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTATTGGCTGTGACACAGTaGAACACTGCATTACTTCAT +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLLAVTQ*NTALLH
Trigger: ATGAAGTAATGCAGTGTTTCACTGTGTCACAGCCAA...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATTCCCATCATTCAATATaGATCTATAGGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYSHHSI*IYRRGW
Trigger: CCAGCCCCTCCTATAGATTCATATTGAATGATGGGA...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATTCCCTGTCGATGATATaGATTCCCATGATGAAAGGT +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNSLSMI*IPMMKG
Trigger: ACCTTTCATCATGGGAATTCATATCATCGACAGGGA...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATCCCTGTCGATGATATaGATTCCCATGATGAAAGGT +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKSLSMI*IPMMKG
Trigger: ACCTTTCATCATGGGAATTCATATCATCGACAGGGA...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATTCTGTCAATGAGCTATaGGAAGAGGGACAAGAACCT +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYSVNEL*EEGQEP
Trigger: AGGTTCTTGTCCCTCTTCTCATAGCTCATTGACAGA...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCATTGGGTTCATGTTCTaGACATTCGTATTTCCACCT +
Preference number: 4 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGIGFMF*TFVFPP
Trigger: AGGTGGAAATACGAATGTTCAGAACATGAACCCAAT...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR TCA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCCTGCATGATCTTGCTTaGTGGTCCTTGATTTTATCA +
Preference number: 4 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGLHDLA*WSLILS
Trigger: TGATAAAATCAAGGACCATCAAGCAAGATCATGCAG...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405141.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCATTACCTGTAGTATCTTaGTTGGTCATAAAGGATTCT +
Preference number: 4 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPLPVVS*LVIKDS
Trigger: AGAATCCTTTATGACCAAGCAAGATACTACAGGTAA...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAAAGTCTGTCATTGTTATaGAGAAGCCCTGAATCCAGA +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKSLSLL*RSPESR
Trigger: TCTGGATTCAGGGCTTCTGCATAACAATGACAGACT...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATGATCAAAGGTGGCGTTaGTTGTTGTGGTGGAAATCT +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYDQRWR*LLWWKS
Trigger: AGATTTCCACCACAACAAGCAACGCCACCTTTGATC...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTTGGTTTAAGATAGCTTaGCGATTTTGGTGTATCAAC +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSWFKIA*RFWCIN
Trigger: GTTGATACACCAAAATCGGCAAGCTATCTTAAACCA...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATATTCGTATTTCCACCTaGCATGGAAACGGTGATGCT +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYIRIST*HGNGDA
Trigger: AGCATCACCGTTTCCATGGCAGGTGGAAATACGAAT...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCTGTACAAGTAGCCTGTaGACTTCTGTTCAGATGATC +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGCTSSL*TSVQMI
Trigger: GATCATCTGAACAGAAGTGCACAGGCTACTTGTACA...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGTGTACAAGTAGCCTGTaGACTTCTGTTCAGATGATC +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKCTSSL*TSVQMI
Trigger: GATCATCTGAACAGAAGTGCACAGGCTACTTGTACA...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTGGCTTTGGCAATTTCTaGAGATGTACATTTCATTTC +
Preference number: 4 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSGFGNF*RCTFHF
Trigger: GAAATGAAATGTACATCTGCAGAAATTGCCAAAGCC...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGAGCAAAGTTGCCTACTaGATGATCTTGCTTGATGGT +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKSKVAY*MILLDG
Trigger: ACCATCAAGCAAGATCATGCAGTAGGCAACTTTGCT...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCAGTGGGTTTGGTCATTaGGGTTGGGTTTGTATTACA +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGSGFGH*GWVCIT
Trigger: TGTAATACAAACCCAACCCCAATGACCAAACCCACT...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCTGTATTATTTGTCCATaGAATCTGATCGCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGCIICP*NLIACS
Trigger: GGAACAGGCGATCAGATTCCATGGACAAATAATACA...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATGCAGTTGCTGCAAACTaGTTTAAGATAGCTTGCCGA +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYAVAAN*FKIACR
Trigger: TCGGCAAGCTATCTTAAACCAGTTTGCAGCAACTGC...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATTGTACCATAGTTTGGTaGATAGGGGAATTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYCTIVW*IGELLW
Trigger: CCACAGCAATTCCCCTATCCACCAAACTATGGTACA...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATTGGAACTTGTCGTTTTaGTTCTCCTCCAAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNWNLSF*FSSKSL
Trigger: AAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCA...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCATTCCTGGAGGCATCTTaGTTTAAATCCATCTTTAAA +
Preference number: 4 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPFLEAS*FKSIFK
Trigger: TTTAAAGATGGATTTAAACCAAGATGCCTCCAGGAA...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATGCTGGTTACATTCTCTaGCACAAATACAATTCTCCC +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYAGYIL*HKYNSP
Trigger: GGGAGAATTGTATTTGTGTCAGAGAATGTAACCAGC...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATTTACTCGGGGAATTaGCATTCCAGAATTAGTGTC +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNIYSGN*HSRISV
Trigger: GACACTAATTCTGGAATGTCAATTCCCCGAGTAAAT...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCATTTACTCGGGGAATTaGCATTCCAGAATTAGTGTC +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGIYSGN*HSRISV
Trigger: GACACTAATTCTGGAATGTCAATTCCCCGAGTAAAT...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATTGGGTTCATGTTCTaGACATTCGTATTTCCACCT +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNIGFMF*TFVFPP
Trigger: AGGTGGAAATACGAATGTTCAGAACATGAACCCAAT...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTAGGCAAAATATTCTCTTaGAGCCAACAGATACAGAGT +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLGKIFS*SQQIQS
Trigger: ACTCTGTATCTGTTGGCTTCAAGAGAATATTTTGCC...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGGGCAAAATATTCTCTTaGAGCCAACAGATACAGAGT +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKGKIFS*SQQIQS
Trigger: ACTCTGTATCTGTTGGCTTCAAGAGAATATTTTGCC...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGTTGCTTGATGGTCCTTaGTTTTATCATCAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKLLDGP*FYHQSQ
Trigger: CTGACTCTGATGATAAAATCAAGGACCATCAAGCAA...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATATCGTCATCAGTTGTTaGTTTCTCTTGATGCCAGTG +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYIVISC*FLLMPV
Trigger: CACTGGCATCAAGAGAAATCAACAACTGATGACGAT...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000407230.5
CDS-3UTR GCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCAAGACAGGACATCTTTaGAGCTTGTGTCTATATCAG +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGKTGHL*SLCLYQ
Trigger: CTGATATAGACACAAGCTGCAAAGATGTCCTGTCTT...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATCGGTGTAGAATTTTATaGCGTTCTGTCAATGAGCTA +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNRCRIL*RSVNEL
Trigger: TAGCTCATTGACAGAACGGCATAAAATTCTACACCG...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGTTTTGGAAGCAAAGTTaGCTACTGCATGATCTTGCT +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKFWKQS*LLHDLA
Trigger: AGCAAGATCATGCAGTAGGCAACTTTGCTTCCAAAA...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCAATCTTGCATTTGTCTaGTTTTACACTCAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGNLAFV*FYTQAV
Trigger: GACAGCTTGAGTGTAAAACCAGACAAATGCAAGATT...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
CDS-3UTR CCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAACAAATCAGACATGACTaGAAATCTTCTCCATCCTCT +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKQIRHD*KSSPSS
Trigger: AGAGGATGGAGAAGATTTCCAGTCATGTCTGATTTG...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAACATCCGAAACTTCCTTaGCTGTTGCTAGAATTACTA +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKHPKLP*LLLELL
Trigger: TAGTAATTCTAGCAACAGCCAAGGAAGTTTCGGATG...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCGCACTAGTTTGTGACTaGTTTGAGAGTATTTACTGT +
Preference number: 4 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGALVCD*FESIYC
Trigger: ACAGTAAATACTCTCAAACCAGTCACAAACTAGTGC...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATGTATTATTTGTCCATaGAATCTGATCGCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKCIICP*NLIACS
Trigger: GGAACAGGCGATCAGATTCCATGGACAAATAATACA...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATTGTATTATTTGTCCATaGAATCTGATCGCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNCIICP*NLIACS
Trigger: GGAACAGGCGATCAGATTCCATGGACAAATAATACA...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTAATTTGTACCATAGTTTaGTGGATAGGGGAATTGCTG +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLICTIV*WIGELL
Trigger: CAGCAATTCCCCTATCCACCAAACTATGGTACAAAT...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATCATCTGGGCCATCATTaGGTTCATGTTCTGAACATT +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYHLGHH*VHVLNI
Trigger: AATGTTCAGAACATGAACCCAATGATGGCCCAGATG...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATCTACGACCTGAAGAATaGCTGCAGATTGAGATATCA +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYLRPEE*LQIEIS
Trigger: TGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAAGCTTCATCTTCTTCTTaGAACTTGTCGTTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKASSSS*NLSFWF
Trigger: GAACCAAAACGACAAGTTCCAAGAAGAAGATGAAGC...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGGCTTCATCTTCTTCTTaGAACTTGTCGTTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKASSSS*NLSFWF
Trigger: GAACCAAAACGACAAGTTCCAAGAAGAAGATGAAGC...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGGTTGGTAACTTCTTTTaGAAGCAAAGTTGCCTACTG +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKVGNFF*KQSCLL
Trigger: CAGTAGGCAACTTTGCTTCCAAAAGAAGTTACCAAC...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATACATTTCCATTAGTATaGATAGATCTCCGAAACCCC +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNTFPLV*IDLRNP
Trigger: GGGGTTTCGGAGATCTATCCATACTAATGGAAATGT...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000406961.5
CDS-3UTR TCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCAATACAAATCAGACATaGCTGGAAATCTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGNTNQT*LEIFSI
Trigger: GATGGAGAAGATTTCCAGTCATGTCTGATTTGTATT...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATAATACAAATCAGACATaGCTGGAAATCTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNNTNQT*LEIFSI
Trigger: GATGGAGAAGATTTCCAGTCATGTCTGATTTGTATT...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATTTTACTGTCTCCATCTaGAAGTCTGTCATTGTTATG +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNFTVSI*KSVIVM
Trigger: CATAACAATGACAGACTTTCAGATGGAGACAGTAAA...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAAAGAATGGCTGCAGATTaGGATATCAAAAATCTCAGA +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKRMAAD*DIKNLR
Trigger: TCTGAGATTTTTGATATCTCAATCTGCAGCCATTCT...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATCTGGCAGTGACATTTTaGTTTGAACCCCAAAGTAAA +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYLAVTF*FEPQSK
Trigger: TTTACTTTGGGGTTCAAATCAAAATGTCACTGCCAG...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATAAGACAGGACATCTTTaGAGCTTGTGTCTATATCAG +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYKTGHL*SLCLYQ
Trigger: CTGATATAGACACAAGCTGCAAAGATGTCCTGTCTT...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATCGGTGTAGAATTTTATaGCGTTCTGTCAATGAGCTA +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYRCRIL*RSVNEL
Trigger: TAGCTCATTGACAGAACGGCATAAAATTCTACACCG...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATAAATTGGTTATCAATTaGTTCCAATTCCAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNKLVIN*FQFQLR
Trigger: CCTGAGCTGGAATTGGAAGCAATTGATAACCAATTT...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCGGCTTTGGCAATTTCTaGAGATGTACATTTCATTTC +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGGFGNF*RCTFHF
Trigger: GAAATGAAATGTACATCTGCAGAAATTGCCAAAGCC...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTAGGCTTTGGCAATTTCTaGAGATGTACATTTCATTTC +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLGFGNF*RCTFHF
Trigger: GAAATGAAATGTACATCTGCAGAAATTGCCAAAGCC...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGGAAAAACTTCACACCTaGGAGACTTCTTTGTTCATA +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKEKLHT*ETSLFI
Trigger: TATGAACAAAGAAGTCTCCCAGGTGTGAAGTTTTTC...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTAGAAAAACTTCACACCTaGGAGACTTCTTTGTTCATA +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLEKLHT*ETSLFI
Trigger: TATGAACAAAGAAGTCTCCCAGGTGTGAAGTTTTTC...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGAATCTTGCATTTGTCTaGTTTTACACTCAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKNLAFV*FYTQAV
Trigger: GACAGCTTGAGTGTAAAACCAGACAAATGCAAGATT...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATCAAATCAGACATGACTaGAAATCTTCTCCATCCTCT +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYQIRHD*KSSPSS
Trigger: AGAGGATGGAGAAGATTTCCAGTCATGTCTGATTTG...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATTCTCTTTGTTATCTTTaGACTCAGCTTTTGCTGGTT +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNSLCYL*TQLLLV
Trigger: AACCAGCAAAAGCTGAGTCCAAAGATAACAAAGAGA...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCGCACTAGTTTGTGACTaGTTTGAGAGTATTTACTGT +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGALVCD*FESIYC
Trigger: ACAGTAAATACTCTCAAACCAGTCACAAACTAGTGC...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTAGTTCTAGTTTTATACTaGAGTTTCCTTGTACCTGTC +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLVLVLY*SFLVPV
Trigger: GACAGGTACAAGGAAACTCCAGTATAAAACTAGAAC...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCGTTCTAGTTTTATACTaGAGTTTCCTTGTACCTGTC +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGVLVLY*SFLVPV
Trigger: GACAGGTACAAGGAAACTCCAGTATAAAACTAGAAC...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATGTTCTAGTTTTATACTaGAGTTTCCTTGTACCTGTC +
Preference number: 4 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNVLVLY*SFLVPV
Trigger: GACAGGTACAAGGAAACTCCAGTATAAAACTAGAAC...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAACCTGGTTGTCCAAATTaGTTATCAATTGCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: MLRPEEWLQIEISKISEKPGCPN*LSIASN
Trigger: ATTGGAAGCAATTGATAACCAATTTGGACAACCAGG...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATATCGTCATCAGTTGTTaGTTTCTCTTGTTCCATTCT +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYIVISC*FLLFHS
Trigger: AGAATGGAACAAGAGAAATCAACAACTGATGACGAT...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR TCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATTTTACTGTCTCCATCTaGAAGTCTGTCATTGTTATG +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYFTVSI*KSVIVM
Trigger: CATAACAATGACAGACTTTCAGATGGAGACAGTAAA...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR TCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATAGAATGGCTGCAGATTaGGATATCAAAAATCTCAGA +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYRMAAD*DIKNLR
Trigger: TCTGAGATTTTTGATATCTCAATCTGCAGCCATTCT...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCTTACCTGTAGTATCTTaGTTGGTCATAAAGGATTCT +
Preference number: 4 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGLPVVS*LVIKDS
Trigger: AGAATCCTTTATGACCAAGCAAGATACTACAGGTAA...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR GCA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTATTACCTGTAGTATCTTaGTTGGTCATAAAGGATTCT +
Preference number: 4 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLLPVVS*LVIKDS
Trigger: AGAATCCTTTATGACCAAGCAAGATACTACAGGTAA...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATTCTCTTTGTTATCTTTaGACTCAGCTTTTGCTGGTT +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYSLCYL*TQLLLV
Trigger: AACCAGCAAAAGCTGAGTCCAAAGATAACAAAGAGA...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATCCTGGTTGTCCAAATTaGTTATCAATTGCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYPGCPN*LSIASN
Trigger: ATTGGAAGCAATTGATAACCAATTTGGACAACCAGG...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR GCA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATTTACCTGTAGTATCTTaGTTGGTCATAAAGGATTCT +
Preference number: 4 (lower is better)
Translates to: LRPEEWLQIEISKISEKYLPVVS*LVIKDS
Trigger: AGAATCCTTTATGACCAAGCAAGATACTACAGGTAA...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS GCA 90 bp GGGCGAGCAAGCGCGCCGGGGTCAAACCCAAGCGCCGTCGAGGGCTaGGCCGACGGAGAGGGACGCCGCGGTCGCCCCCATTTCGCGGTC +
Preference number: 5 (lower is better)
Translates to: GRASAPGSNPSAVEG*ADGEGRRGRPHFAV
Trigger: GACCGCGAAATGGGGGCGACCGCGGCGTCCCTCTCCGTCGGCGCAGCCCTCGACGGCGCTTGGGTTTGACCCCGGCGCGCTTGCTCGCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000405141.5
ENST00000406961.5
ENST00000469850.5
ENST00000496333.5
CDS TCA 90 bp AGGACAGAGCTCAGCAAATCGCGTCAGACTCCCGCTCGCCCGGCCTaGAGAACAGGCATTTCAGCCGCTCTCCGCGGCCGCCATGTTCTC +
Preference number: 5 (lower is better)
Translates to: RTELSKSRQTPARPA*RTGISAALRGRHVL
Trigger: GAGAACATGGCGGCCGCGGAGAGCGGCTGAAATGCCTGTTCTTCAGGCCGGGCGAGCGGGAGTCTGACGCGATTTGCTGAGCTCTGTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348332.8
CDS-3UTR CAA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTCTTCCTGGGCAGGGTaGGGACTAAGCGGCGGAGGC +
Preference number: 5 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLSSWAG*GLSGGG
Trigger: GCCTCCGCCGCTTAGTCCCAACCCTGCCCAGGAAGA...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
CDS-3UTR CAA 90 bp GAGTTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCATCTGAGGAGGAGGGATaGGCATCGGCACCATGGAGC +
Preference number: 5 (lower is better)
Translates to: EFPVDQAGSGKGPRLPDSSEEEG*ASAPWS
Trigger: GCTCCATGGTGCCGATGCCAATCCCTCCTCCTCAGA...TGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GAGTTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACCTCTGTCGGTGCTGTaGACTGTACAGTTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: EFPVDQAGSGKGPRLPDSPLSVL*TVQFPL
Trigger: CAGCGGGAACTGTACAGTCAACAGCACCGACAGAGG...TGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGCTGCTCACCATGCTGTaGCGGTTGGCCAAGGATGCT +
Preference number: 5 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLLLTML*RLAKDA
Trigger: AGCATCCTTGGCCAACCGCAACAGCATGGTGAGCAG...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGTCTGAGGAGGAGGGATaGGCATCGGCACCATGGAGC +
Preference number: 5 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQSEEEG*ASAPWS
Trigger: GCTCCATGGTGCCGATGCCAATCCCTCCTCCTCAGA...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACCTCTGTCGGTGCTGTaGACTGTACAGTTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGPLSVL*TVQFPL
Trigger: CAGCGGGAACTGTACAGTCAACAGCACCGACAGAGG...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGTGGTGGATAGGGGAATaGCTGTGGAGCACCCTGAGG +
Preference number: 5 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQWWIGE*LWSTLR
Trigger: CCTCAGGGTGCTCCACAGCAATTCCCCTATCCACCA...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACCATGCTGTTGCGGTaGGCCAAGGATGCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: SQWTRLVQVRVPAYQIHCTMLLR*AKDASG
Trigger: TCCTGAAGCATCCTTGGCCAACCGCAACAGCATGGT...ACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGCTGCTCACCATGCTGTaGCGGTTGGCCAAGGATGCT +
Preference number: 5 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKLLTML*RLAKDA
Trigger: AGCATCCTTGGCCAACCGCAACAGCATGGTGAGCAG...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGAAAGTTGGCCTCACCTaGGGGAACCATTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLKVGLT*GNHSCS
Trigger: GGAGCAGGAATGGTTCCCCAAGGTGAGGCCAACTTT...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCATCTTCCTGGGCAGGGTaGGGACTAAGCGGCGGAGGC +
Preference number: 5 (lower is better)
Translates to: RDTLGQYALDQLEQLFLASSWAG*GLSGGG
Trigger: GCCTCCGCCGCTTAGTCCCAACCCTGCCCAGGAAGA...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS GCA 90 bp GTGCAGCCGGAGGTCTGTTTAGAGTTTGCCTGGGCTGCATGCCCATaGCAGGTGAAAAAGCACCTCGGGGAGGTGTTACTTGAACAGGCA +
Preference number: 5 (lower is better)
Translates to: VQPEVCLEFAWAACP*QVKKHLGEVLLEQA
Trigger: TGCCTGTTCAAGTAACACCTCCCCGAGGTGCTTTTTCACCTGGCATGGGCATGCAGCCCAGGCAAACTCTAAACAGACCTCCGGCTGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CCA 90 bp CGGGCTGGTAGAAGCAGGTGGGGTTCCTGGATTTGTACCATAGTTTaGTGGATAGGGGAATTGCTGTGGAGCACCCTGAGGAAGACGGGG +
Preference number: 5 (lower is better)
Translates to: RAGRSRWGSWICTIV*WIGELLWSTLRKTG
Trigger: CCCCGTCTTCCTCAGGGTGCTCCACAGCAATTCCCCTATCCACCAAACTATGGTACAAATCCAGGAACCCCACCTGCTTCTACCAGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CCA 90 bp GCATCGGCACCATGGAGCTCCCAGGGCTTAGAGATGGAGCAAAGTTaGCCTCACCTTGGGGAACCATTCCTGCTCCTGGATACTGGAAGA +
Preference number: 5 (lower is better)
Translates to: ASAPWSSQGLEMEQS*PHLGEPFLLLDTGR
Trigger: TCTTCCAGTATCCAGGAGCAGGAATGGTTCCCCAAGGTGAGGCCAACTTTGCTCCATCTCTAAGCCCTGGGAGCTCCATGGTGCCGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTACGCTGGCAAGCTTCTaGGTTCTCGGTCCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVTLASF*VLGPWL
Trigger: GAGCCAGGGACCGAGAACCAAGAAGCTTGCCAGCGT...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp CAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAACACCCTCTGTCGGTGCTGTaGACTGTACAGTTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: QVRVPAYQIHCTLDVSKHPLSVL*TVQFPL
Trigger: CAGCGGGAACTGTACAGTCAACAGCACCGACAGAGG...GTGTTTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGACCATGCTGTTGCGGTaGGCCAAGGATGCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKTMLLR*AKDASG
Trigger: TCCTGAAGCATCCTTGGCCAACCGCAACAGCATGGT...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS TCA 90 bp CATAAGCCTGGCAACTGTGCTGCCTTCTCCAGCGTGGGCAGTAACTaGTCAAACTGGTCAAGGTCAGCTGTAAACTGGCTCTGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: HKPGNCAAFSSVGSN*SNWSRSAVNWLWAS
Trigger: GGAGGCCCAGAGCCAGTTTACAGCTGACCTTGACCAGTTTGATCAGTTACTGCCCACGCTGGAGAAGGCAGCACAGTTGCCAGGCTTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
ENST00000486198.1
CDS-3UTR CAA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGTCGTCGTGTTGCCTCTaGAGGCCAAGGAACTCCATT +
Preference number: 5 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQSSCCL*RPRNSI
Trigger: AATGGAGTTCCTTGGCCTCAAGAGGCAACACGACGA...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGGGCTATTTCGTCGTGTaGCCTCTTGAGGCCAAGGAA +
Preference number: 5 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKGYFVV*PLEAKE
Trigger: TTCCTTGGCCTCAAGAGGCAACACGACGAAATAGCC...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTACGCTGGCAAGCTTCTaGGTTCTCGGTCCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSTLASF*VLGPWL
Trigger: GAGCCAGGGACCGAGAACCAAGAAGCTTGCCAGCGT...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GAGTTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCATATTACAGGCACTACTaGTCATGCCAACGGGAGAGC +
Preference number: 5 (lower is better)
Translates to: EFPVDQAGSGKGPRLPDSYYRHY*SCQRES
Trigger: GCTCTCCCGTTGGCATGACAAGTAGTGCCTGTAATA...TGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGGGCAGGATCTCCGATTaGATGGTTACACTGGTGACC +
Preference number: 5 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQGRISD*MVTLVT
Trigger: GGTCACCAGTGTAACCATCAAATCGGAGATCCTGCC...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGATTGCCTGACCATGCCTaGGAAAGGGCTAGGGAGATT +
Preference number: 5 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGLPDHA*ERAREI
Trigger: AATCTCCCTAGCCCTTTCCAAGGCATGGTCAGGCAA...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGTTGCCTGACCATGCCTaGGAAAGGGCTAGGGAGATT +
Preference number: 5 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKLPDHA*ERAREI
Trigger: AATCTCCCTAGCCCTTTCCAAGGCATGGTCAGGCAA...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTCAGTTCCCGCTGACGTaGTGCCAACATTTGAGCATT +
Preference number: 5 (lower is better)
Translates to: SQWTRLVQVRVPAYQIHCQFPLT*CQHLSI
Trigger: AATGCTCAAATGTTGGCACAACGTCAGCGGGAACTG...ACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGGTTGTTCCCAAAGCTTaGCTGCCTCATAAGCATGGC +
Preference number: 5 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLVVPKA*LPHKHG
Trigger: GCCATGCTTATGAGGCAGCAAAGCTTTGGGAACAAC...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp CAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAACACAAAGTTGGCCTCACCTaGGGGAACCATTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: QVRVPAYQIHCTLDVSKHKVGLT*GNHSCS
Trigger: GGAGCAGGAATGGTTCCCCAAGGTGAGGCCAACTTT...GTGTTTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCATCTGAGGAGGAGGGATaGGCATCGGCACCATGGAGC +
Preference number: 5 (lower is better)
Translates to: RDTLGQYALDQLEQLFLASEEEG*ASAPWS
Trigger: GCTCCATGGTGCCGATGCCAATCCCTCCTCCTCAGA...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGGTTTCCTATCGCTCCTaGCTGCCAGGCCTTCATGTC +
Preference number: 5 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLVSYRS*LPGLHV
Trigger: GACATGAAGGCCTGGCAGCAAGGAGCGATAGGAAAC...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAGTTTCCTATCGCTCCTaGCTGCCAGGCCTTCATGTC +
Preference number: 5 (lower is better)
Translates to: GSGKGPRLPDSLYTGRQQVSYRS*LPGLHV
Trigger: GACATGAAGGCCTGGCAGCAAGGAGCGATAGGAAAC...TTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS CCA 90 bp TCCACCTGCCATGGAAACGGTGATGCTCATGTTGTTGTATACTCCTaGCTGTGCAGGCGTGGGCTGGTTCTGGACAGCTTGACTGAACAC +
Preference number: 5 (lower is better)
Translates to: STCHGNGDAHVVVYS*LCRRGLVLDSLTEH
Trigger: GTGTTCAGTCAAGCTGTCCAGAACCAGCCCACGCCTGCACAGCCAGGAGTATACAACAACATGAGCATCACCGTTTCCATGGCAGGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp CAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAACACCCGAGGCCACTCATGTaGAAAAACTTCACACCTGGG +
Preference number: 5 (lower is better)
Translates to: QVRVPAYQIHCTLDVSKHPRPLM*KNFTPG
Trigger: CCCAGGTGTGAAGTTTTTCAACATGAGTGGCCTCGG...GTGTTTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGGGCTATTTCGTCGTGTaGCCTCTTGAGGCCAAGGAA +
Preference number: 5 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLGYFVV*PLEAKE
Trigger: TTCCTTGGCCTCAAGAGGCAACACGACGAAATAGCC...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp CAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAACACGGCTATTTCGTCGTGTaGCCTCTTGAGGCCAAGGAA +
Preference number: 5 (lower is better)
Translates to: QVRVPAYQIHCTLDVSKHGYFVV*PLEAKE
Trigger: TTCCTTGGCCTCAAGAGGCAACACGACGAAATAGCC...GTGTTTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GAGTTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCAACGAGTCATCACTTCTaGGAACAGCTGTCTGGCATA +
Preference number: 5 (lower is better)
Translates to: EFPVDQAGSGKGPRLPDSTSHHF*EQLSGI
Trigger: TATGCCAGACAGCTGTTCCAAGAAGTGATGACTCGT...TGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACTGGTGGATACCATGTaGCTGTTGGATGGTGGCAAT +
Preference number: 5 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGLVDTM*LLDGGN
Trigger: ATTGCCACCATCCAACAGCAACATGGTATCCACCAG...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGCTGGTGGATACCATGTaGCTGTTGGATGGTGGCAAT +
Preference number: 5 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKLVDTM*LLDGGN
Trigger: ATTGCCACCATCCAACAGCAACATGGTATCCACCAG...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTCTGGTGGATACCATGTaGCTGTTGGATGGTGGCAAT +
Preference number: 5 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTLVDTM*LLDGGN
Trigger: ATTGCCACCATCCAACAGCAACATGGTATCCACCAG...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTAAGCCAACGGAGTTATaGGGTCCTTCATTCATACCC +
Preference number: 5 (lower is better)
Translates to: SQWTRLVQVRVPAYQIHCKPTEL*GPSFIP
Trigger: GGGTATGAATGAAGGACCCAATAACTCCGTTGGCTT...ACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGCCTGAATCCAGAGGTTaGCCATCACTAGAGCTGTTG +
Preference number: 5 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKPESRG*PSLELL
Trigger: CAACAGCTCTAGTGATGGCAAACCTCTGGATTCAGG...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGGCTGTTCGGCAGTTGTaGTCAAAAGCTGCACTAGTT +
Preference number: 5 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLAVRQL*SKAALV
Trigger: AACTAGTGCAGCTTTTGACAACAACTGCCGAACAGC...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp CAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAACACGGCAGGATCTCCGATTaGATGGTTACACTGGTGACC +
Preference number: 5 (lower is better)
Translates to: QVRVPAYQIHCTLDVSKHGRISD*MVTLVT
Trigger: GGTCACCAGTGTAACCATCAAATCGGAGATCCTGCC...GTGTTTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTTGGTGGATAGGGGAATaGCTGTGGAGCACCCTGAGG +
Preference number: 5 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSWWIGE*LWSTLR
Trigger: CCTCAGGGTGCTCCACAGCAATTCCCCTATCCACCA...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCACTGCTCACCATGCTGTaGCGGTTGGCCAAGGATGCT +
Preference number: 5 (lower is better)
Translates to: RDTLGQYALDQLEQLFLALLTML*RLAKDA
Trigger: AGCATCCTTGGCCAACCGCAACAGCATGGTGAGCAG...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTAAAGTTGGCCTCACCTaGGGGAACCATTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVKVGLT*GNHSCS
Trigger: GGAGCAGGAATGGTTCCCCAAGGTGAGGCCAACTTT...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS CCA 90 bp CTGAGCTCTGCTGGCGGTTTATTCTGGTGGATACCATGTTGCTGTTaGATGGTGGCAATGTGGATGAACGAGCCACACCATGAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: LSSAGGLFWWIPCCC*MVAMWMNEPHHELE
Trigger: CTCCAGCTCATGGTGTGGCTCGTTCATCCACATTGCCACCATCCAACAGCAACATGGTATCCACCAGAATAAACCGCCAGCAGAGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTCCGAGGCCACTCATGTaGAAAAACTTCACACCTGGG +
Preference number: 5 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVPRPLM*KNFTPG
Trigger: CCCAGGTGTGAAGTTTTTCAACATGAGTGGCCTCGG...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGACGAGTCATCACTTCTaGGAACAGCTGTCTGGCATA +
Preference number: 5 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQTSHHF*EQLSGI
Trigger: TATGCCAGACAGCTGTTCCAAGAAGTGATGACTCGT...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAGGAGAGATACTAGGATaGACCGAGGGATTTACTCGG +
Preference number: 5 (lower is better)
Translates to: GSGKGPRLPDSLYTGRQQGEILG*TEGFTR
Trigger: CCGAGTAAATCCCTCGGTCAATCCTAGTATCTCTCC...TTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGGGAGAGATACTAGGATaGACCGAGGGATTTACTCGG +
Preference number: 5 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLGEILG*TEGFTR
Trigger: CCGAGTAAATCCCTCGGTCAATCCTAGTATCTCTCC...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGGATACCATGTTGCTGTaGGATGGTGGCAATGTGGAT +
Preference number: 5 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQDTMLL*DGGNVD
Trigger: ATCCACATTGCCACCATCCAACAGCAACATGGTATC...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GAGTTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCAGCATCCGAAACTTCCTaGGCTGTTGCTAGAATTACT +
Preference number: 5 (lower is better)
Translates to: EFPVDQAGSGKGPRLPDSASETS*AVARIT
Trigger: AGTAATTCTAGCAACAGCCAAGGAAGTTTCGGATGC...TGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGCTGTTCGGCAGTTGTaGTCAAAAGCTGCACTAGTT +
Preference number: 5 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTAVRQL*SKAALV
Trigger: AACTAGTGCAGCTTTTGACAACAACTGCCGAACAGC...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGAACTGCTGTTCGGCAGTaGTTGTCAAAAGCTGCACTA +
Preference number: 5 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGTAVRQ*LSKAAL
Trigger: TAGTGCAGCTTTTGACAACAACTGCCGAACAGCAGT...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGGGACATCTTTGCAGCTaGTGTCTATATCAGCATGCC +
Preference number: 5 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQGHLCS*CLYQHA
Trigger: GGCATGCTGATATAGACACAAGCTGCAAAGATGTCC...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGGAGTGGGTTTGGTCATaGGGGTTGGGTTTGTATTAC +
Preference number: 5 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKEWVWS*GLGLYY
Trigger: GTAATACAAACCCAACCCCAATGACCAAACCCACTC...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGAGTGGGTTTGGTCATaGGGGTTGGGTTTGTATTAC +
Preference number: 5 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTEWVWS*GLGLYY
Trigger: GTAATACAAACCCAACCCCAATGACCAAACCCACTC...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GAGTTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCAAGCTCAGTTTCATCTTaGCCACTAAGGAAGGATACC +
Preference number: 5 (lower is better)
Translates to: EFPVDQAGSGKGPRLPDSSSVSS*PLRKDT
Trigger: GGTATCCTTCCTTAGTGGCAAAGATGAAACTGAGCT...TGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGGATAGCTTGCCGATTTaGGTGTATCAACTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLDSLPI*VYQLLL
Trigger: CAACAGCAGTTGATACACCAAAATCGGCAAGCTATC...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp CAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAACACGTTGTTCCCAAAGCTTaGCTGCCTCATAAGCATGGC +
Preference number: 5 (lower is better)
Translates to: QVRVPAYQIHCTLDVSKHVVPKA*LPHKHG
Trigger: GCCATGCTTATGAGGCAGCAAAGCTTTGGGAACAAC...GTGTTTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GAGTTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGGTTCTGGACAGCTaGACTGAACACATTGTTGTT +
Preference number: 5 (lower is better)
Translates to: EFPVDQAGSGKGPRLPDSLVLDS*TEHIVV
Trigger: AACAACAATGTGTTCAGTCAAGCTGTCCAGAACCAG...TGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGGTGATGCTCATGTTGTaGTATACTCCTGGCTGTGCA +
Preference number: 5 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKVMLML*YTPGCA
Trigger: TGCACAGCCAGGAGTATACAACAACATGAGCATCAC...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGTGATGCTCATGTTGTaGTATACTCCTGGCTGTGCA +
Preference number: 5 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTVMLML*YTPGCA
Trigger: TGCACAGCCAGGAGTATACAACAACATGAGCATCAC...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGACGGTGATGCTCATGTaGTTGTATACTCCTGGCTGT +
Preference number: 5 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQTVMLM*LYTPGC
Trigger: ACAGCCAGGAGTATACAACAACATGAGCATCACCGT...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTTGGAACTTGTCGTTTaGGTTCTCCTCCAAAAGCCT +
Preference number: 5 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLLELVV*VLLQKP
Trigger: AGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAA...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
CDS GCA 90 bp GAAGGTCTGAGCTCTGCTGGCGGTTTATTCTGGTGGATACCATGTTaGTGTTGGATGGTGGCAATGTGGATGAACGAGCCACACCATGAG +
Preference number: 5 (lower is better)
Translates to: EGLSSAGGLFWWIPC*CWMVAMWMNEPHHE
Trigger: CTCATGGTGTGGCTCGTTCATCCACATTGCCACCATCCAACAGCAACATGGTATCCACCAGAATAAACCGCCAGCAGAGCTCAGACCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CCA 90 bp CTCCTATGTTTCCTGTCATGCCTCTGCTCACCATGCTGTTGCGGTTaGCCAAGGATGCTTCAGGATTTGCTGCTAGTTGTGAAAACGGGC +
Preference number: 5 (lower is better)
Translates to: LLCFLSCLCSPCCCG*PRMLQDLLLVVKTG
Trigger: GCCCGTTTTCACAACTAGCAGCAAATCCTGAAGCATCCTTGGCCAACCGCAACAGCATGGTGAGCAGAGGCATGACAGGAAACATAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGAGAATTAGTGTCATCTaGAGGAGAAAGCCCACTGTG +
Preference number: 5 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKRISVI*RRKPTV
Trigger: CACAGTGGGCTTTCTCCTCAAGATGACACTAATTCT...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTCTGGTGGATACCATGTaGCTGTTGGATGGTGGCAAT +
Preference number: 5 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVLVDTM*LLDGGN
Trigger: ATTGCCACCATCCAACAGCAACATGGTATCCACCAG...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGTTAGGAGGAAAGGAATaGTTTGGCATCCTGGGCCTT +
Preference number: 5 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLLGGKE*FGILGL
Trigger: AAGGCCCAGGATGCCAAACAATTCCTTTCCTCCTAA...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp CAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAACACTTAGGAGGAAAGGAATaGTTTGGCATCCTGGGCCTT +
Preference number: 5 (lower is better)
Translates to: QVRVPAYQIHCTLDVSKHLGGKE*FGILGL
Trigger: AAGGCCCAGGATGCCAAACAATTCCTTTCCTCCTAA...GTGTTTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGCAAGACAGGACATCTTaGCAGCTTGTGTCTATATCA +
Preference number: 5 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLQDRTS*QLVSIS
Trigger: TGATATAGACACAAGCTGCAAAGATGTCCTGTCTTG...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp CAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAACACGAGTGGGTTTGGTCATaGGGGTTGGGTTTGTATTAC +
Preference number: 5 (lower is better)
Translates to: QVRVPAYQIHCTLDVSKHEWVWS*GLGLYY
Trigger: GTAATACAAACCCAACCCCAATGACCAAACCCACTC...GTGTTTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GAGTTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCAATCGCCTGTTCCTGGTaGTCCAAATTGGTTATCAAT +
Preference number: 5 (lower is better)
Translates to: EFPVDQAGSGKGPRLPDSIACSW*SKLVIN
Trigger: ATTGATAACCAATTTGGACAACCAGGAACAGGCGAT...TGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGCTGTCACTGTATTATTaGTCCATGGAATCTGATCGC +
Preference number: 5 (lower is better)
Translates to: FPVDQAGSGKGPRLPDSLLSLYY*SMESDR
Trigger: GCGATCAGATTCCATGGACAAATAATACAGTGACAG...CAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTTCGGGGAGGTGTTACTaGAACAGGCATCGTCCCCAG +
Preference number: 5 (lower is better)
Translates to: SRAVCSRSAGTALSGSDISGRCY*NRHRPQ
Trigger: CTGGGGACGATGCCTGTTCAAGTAACACCTCCCCGA...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTGTTGTTCCCAAAGCTTaGCTGCCTCATAAGCATGGC +
Preference number: 5 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVVVPKA*LPHKHG
Trigger: GCCATGCTTATGAGGCAGCAAAGCTTTGGGAACAAC...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGGTGGGGTTCCTGGATTaGTACCATAGTTTGGTGGAT +
Preference number: 5 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLVGFLD*YHSLVD
Trigger: ATCCACCAAACTATGGTACAAATCCAGGAACCCCAC...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGGTGATGCTCATGTTGTaGTATACTCCTGGCTGTGCA +
Preference number: 5 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLVMLML*YTPGCA
Trigger: TGCACAGCCAGGAGTATACAACAACATGAGCATCAC...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp CAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAACACGCATCTGGGCCATCATaGGGTTCATGTTCTGAACAT +
Preference number: 5 (lower is better)
Translates to: QVRVPAYQIHCTLDVSKHASGPS*GSCSEH
Trigger: ATGTTCAGAACATGAACCCAATGATGGCCCAGATGC...GTGTTTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAAACTCTTCTGTCTTCTaGTCCTGGGTTCCATCTGCT +
Preference number: 5 (lower is better)
Translates to: GSGKGPRLPDSLYTGRQQNSSVF*SWVPSA
Trigger: AGCAGATGGAACCCAGGACAAGAAGACAGAAGAGTT...TTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGTCTTCTTCTTGGAACTaGTCGTTTTGGTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQSSSWN*SFWFSS
Trigger: GGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGA...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
CDS-3UTR CAA 90 bp TCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTCCAACAGATACAGAGTaGCTAGAGAAGCTGATTGTA +
Preference number: 5 (lower is better)
Translates to: SQWTRLVQVRVPAYQIHCPTDTE*LEKLIV
Trigger: TACAATCAGCTTCTCTAGCAACTCTGTATCTGTTGG...ACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
CDS TCA 90 bp CGCTGGCAAGCTTCTTGGTTCTCGGTCCCTGGCTCATCTGGAGGGTaGATTAGCATCCTGCAGTTAAAGGTATGGCTATTTCGTCGTGTT +
Preference number: 5 (lower is better)
Translates to: RWQASWFSVPGSSGG*ISILQLKVWLFRRV
Trigger: AACACGACGAAATAGCCATACCTTTAACTGCAGGATGCTAATTCACCCTCCAGATGAGCCAGGGACCGAGAACCAAGAAGCTTGCCAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS TCA 90 bp ATGTTGCTGTTGGATGGTGGCAATGTGGATGAACGAGCCACACCATaGGCTGGAGAGATACTAGGATTGACCGAGGGATTTACTCGGGGA +
Preference number: 5 (lower is better)
Translates to: MLLLDGGNVDERATP*AGEILGLTEGFTRG
Trigger: TCCCCGAGTAAATCCCTCGGTCAATCCTAGTATCTCTCCAGCTCATGGTGTGGCTCGTTCATCCACATTGCCACCATCCAACAGCAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS TCA 90 bp TCAGGTAATCTATTTAGCCTGGAAGTGGGTCTGGCAGTGGCGGACTaGAGTGAAGCTGGCAGGATCTCCGATTTGATGGTTACACTGGTG +
Preference number: 5 (lower is better)
Translates to: SGNLFSLEVGLAVAD*SEAGRISDLMVTLV
Trigger: CACCAGTGTAACCATCAAATCGGAGATCCTGCCAGCTTCACTTCAGTCCGCCACTGCCAGACCCACTTCCAGGCTAAATAGATTACCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS TCA 90 bp CAGAACATACTATTTAGCCTGGAAGTGGGTCTGGCAGTGGCGGACTaGAGTGAAGCTGGCAGGATCTCCGATTTGATGGTTACACTGGTG +
Preference number: 5 (lower is better)
Translates to: QNILFSLEVGLAVAD*SEAGRISDLMVTLV
Trigger: CACCAGTGTAACCATCAAATCGGAGATCCTGCCAGCTTCACTTCAGTCCGCCACTGCCAGACCCACTTCCAGGCTAAATAGTATGTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486198.1
CDS GCA 90 bp TGCCAAACTGTCCTCCTATGTTTCCTGTCATGCCTCTGCTCACCATaGTGTTGCGGTTGGCCAAGGATGCTTCAGGATTTGCTGCTAGTT +
Preference number: 5 (lower is better)
Translates to: CQTVLLCFLSCLCSP*CCGWPRMLQDLLLV
Trigger: AACTAGCAGCAAATCCTGAAGCATCCTTGGCCAACCGCAACAGCATGGTGAGCAGAGGCATGACAGGAAACATAGGAGGACAGTTTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS GCA 90 bp TGCCATGGAAACGGTGATGCTCATGTTGTTGTATACTCCTGGCTGTaGAGGCGTGGGCTGGTTCTGGACAGCTTGACTGAACACATTGTT +
Preference number: 5 (lower is better)
Translates to: CHGNGDAHVVVYSWL*RRGLVLDSLTEHIV
Trigger: AACAATGTGTTCAGTCAAGCTGTCCAGAACCAGCCCACGCCTGCACAGCCAGGAGTATACAACAACATGAGCATCACCGTTTCCATGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CCA 90 bp GACTGCTGCTATGAAGGTCTGAGCTCTGCTGGCGGTTTATTCTGGTaGATACCATGTTGCTGTTGGATGGTGGCAATGTGGATGAACGAG +
Preference number: 5 (lower is better)
Translates to: DCCYEGLSSAGGLFW*IPCCCWMVAMWMNE
Trigger: CTCGTTCATCCACATTGCCACCATCCAACAGCAACATGGTATCCACCAGAATAAACCGCCAGCAGAGCTCAGACCTTCATAGCAGCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CCA 90 bp CAGTGCGGGATCATTTATCTGCTCAGGGCACACAGTGTTCATTCCTaGCATCTGCAAAGAGCTCATCTGCATCTGGGCCATCATTGGGTT +
Preference number: 5 (lower is better)
Translates to: QCGIIYLLRAHSVHS*HLQRAHLHLGHHWV
Trigger: AACCCAATGATGGCCCAGATGCAGATGAGCTCTTTGCAGATGCCAGGAATGAACACTGTGTGCCCTGAGCAGATAAATGATCCCGCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGTCAATGTCACTAATGTaGGCAGACAGTAACTCAGCT +
Preference number: 5 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKSMSLM*ADSNSA
Trigger: AGCTGAGTTACTGTCTGCCAACATTAGTGACATTGA...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTGTACATCGTCATCAGTaGTTGATTTCTCTTGTTCCA +
Preference number: 5 (lower is better)
Translates to: SQWTRLVQVRVPAYQIHCVHRHQ*LISLVP
Trigger: TGGAACAAGAGAAATCAACAACTGATGACGATGTAC...ACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
CDS-3UTR CAA 90 bp TCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTCCTGTAGTATCTTGCTaGGTCATAAAGGATTCTACA +
Preference number: 5 (lower is better)
Translates to: SQWTRLVQVRVPAYQIHCPVVSC*VIKDST
Trigger: TGTAGAATCCTTTATGACCAAGCAAGATACTACAGG...ACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGGAGAGATACTAGGATaGACCGAGGGATTTACTCGG +
Preference number: 5 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSGEILG*TEGFTR
Trigger: CCGAGTAAATCCCTCGGTCAATCCTAGTATCTCTCC...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGGCATCCGAAACTTCCTaGGCTGTTGCTAGAATTACT +
Preference number: 5 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLASETS*AVARIT
Trigger: AGTAATTCTAGCAACAGCCAAGGAAGTTTCGGATGC...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTTCTGAAAGTCTGTCATaGTTATGCAGAAGCCCTGAA +
Preference number: 5 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTSESLS*LCRSPE
Trigger: TTCAGGGCTTCTGCATAACAATGACAGACTTTCAGA...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGTCATTGGGGTTGGGTTaGTATTACATGGATCCATCT +
Preference number: 5 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKSLGLG*YYMDPS
Trigger: AGATGGATCCATGTAATACAAACCCAACCCCAATGA...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGAGTTTGGTCATTGGGGTaGGGTTTGTATTACATGGAT +
Preference number: 5 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGVWSLG*GLYYMD
Trigger: ATCCATGTAATACAAACCCAACCCCAATGACCAAAC...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTTCCTGGTTGTCCAAATaGGTTATCAATTGCTTCCAA +
Preference number: 5 (lower is better)
Translates to: SQWTRLVQVRVPAYQIHCSWLSK*VINCFQ
Trigger: TTGGAAGCAATTGATAACCAATTTGGACAACCAGGA...ACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGATCGCCTGTTCCTGGTaGTCCAAATTGGTTATCAAT +
Preference number: 5 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKIACSW*SKLVIN
Trigger: ATTGATAACCAATTTGGACAACCAGGAACAGGCGAT...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGAGCTCAGTTTCATCTTaGCCACTAAGGAAGGATACC +
Preference number: 5 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLSSVSS*PLRKDT
Trigger: GGTATCCTTCCTTAGTGGCAAAGATGAAACTGAGCT...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTCAGTTCCCGCTGACGTaGTGCCAACATTTGAGCATT +
Preference number: 5 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSQFPLT*CQHLSI
Trigger: AATGCTCAAATGTTGGCACAACGTCAGCGGGAACTG...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGGATTTGTACCATAGTTaGGTGGATAGGGGAATTGCT +
Preference number: 5 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKDLYHS*VDRGIA
Trigger: AGCAATTCCCCTATCCACCAAACTATGGTACAAATC...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp CAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAACACAGGATGCTTCAGGATTaGCTGCTAGTTGTGAAAACG +
Preference number: 5 (lower is better)
Translates to: QVRVPAYQIHCTLDVSKHRMLQD*LLVVKT
Trigger: CGTTTTCACAACTAGCAGCAAATCCTGAAGCATCCT...GTGTTTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAAGGATGCTTCAGGATTaGCTGCTAGTTGTGAAAACG +
Preference number: 5 (lower is better)
Translates to: GSGKGPRLPDSLYTGRQQRMLQD*LLVVKT
Trigger: CGTTTTCACAACTAGCAGCAAATCCTGAAGCATCCT...TTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAACTGGTTCTGGACAGCTaGACTGAACACATTGTTGTT +
Preference number: 5 (lower is better)
Translates to: GSGKGPRLPDSLYTGRQQLVLDS*TEHIVV
Trigger: AACAACAATGTGTTCAGTCAAGCTGTCCAGAACCAG...TTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTGACACAACTCACTTCTaGTCCTTCACCCATCTCATC +
Preference number: 5 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVDTTHF*SFTHLI
Trigger: GATGAGATGGGTGAAGGACAAGAAGTGAGTTGTGTC...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS TCA 90 bp GGTTCATGTTCTGAACATTCGTATTTCCACCTGCCATGGAAACGGTaGTGCTCATGTTGTTGTATACTCCTGGCTGTGCAGGCGTGGGCT +
Preference number: 5 (lower is better)
Translates to: GSCSEHSYFHLPWKR*CSCCCILLAVQAWA
Trigger: AGCCCACGCCTGCACAGCCAGGAGTATACAACAACATGAGCATCACCGTTTCCATGGCAGGTGGAAATACGAATGTTCAGAACATGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS GCA 90 bp ACTGTCCTCCTATGTTTCCTGTCATGCCTCTGCTCACCATGCTGTTaGGGTTGGCCAAGGATGCTTCAGGATTTGCTGCTAGTTGTGAAA +
Preference number: 5 (lower is better)
Translates to: TVLLCFLSCLCSPCC*GWPRMLQDLLLVVK
Trigger: TTTCACAACTAGCAGCAAATCCTGAAGCATCCTTGGCCAACCGCAACAGCATGGTGAGCAGAGGCATGACAGGAAACATAGGAGGACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CCA 90 bp GATTACTGCTCTGTGAACTGGCCTGTCCTTGGTTTAAGGCAACATTaGCTACAATCTGACTTCCGGGTGAGCATCCGAAACTTCCTTGGC +
Preference number: 5 (lower is better)
Translates to: DYCSVNWPVLGLRQH*LQSDFRVSIRNFLG
Trigger: GCCAAGGAAGTTTCGGATGCTCACCCGGAAGTCAGATTGTAGCCAATGTTGCCTTAAACCAAGGACAGGCCAGTTCACAGAGCAGTAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTACCTGGGAGACTTCTTaGTTCATAATGAATCCTCAA +
Preference number: 5 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTTWETS*FIMNPQ
Trigger: TTGAGGATTCATTATGAACAAAGAAGTCTCCCAGGT...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTGCCTCTTTTCCGTGCTaGATGCCAGTGTGTCACATG +
Preference number: 5 (lower is better)
Translates to: SRAVCSRSAGTALSGSDIASFPC*MPVCHM
Trigger: CATGTGACACACTGGCATCAAGCACGGAAAAGAGGC...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGTCACTCCTTGACTACTaGATGAGATGTCTGATTTCT +
Preference number: 5 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKSLLDY*MRCLIS
Trigger: AGAAATCAGACATCTCATCAAGTAGTCAAGGAGTGA...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGTCACTCCTTGACTACTaGATGAGATGTCTGATTTCT +
Preference number: 5 (lower is better)
Translates to: AGSGKGPRLPDSLYTGRQSLLDY*MRCLIS
Trigger: AGAAATCAGACATCTCATCAAGTAGTCAAGGAGTGA...CTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACCTGTAGTATCTTGCTaGGTCATAAAGGATTCTACA +
Preference number: 5 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGPVVSC*VIKDST
Trigger: TGTAGAATCCTTTATGACCAAGCAAGATACTACAGG...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTTTTACCTGTAGTATCTaGCTTGGTCATAAAGGATTC +
Preference number: 5 (lower is better)
Translates to: SQWTRLVQVRVPAYQIHCFTCSI*LGHKGF
Trigger: GAATCCTTTATGACCAAGCAAGATACTACAGGTAAA...ACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGATACCATGTTGCTGTaGGATGGTGGCAATGTGGAT +
Preference number: 5 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSDTMLL*DGGNVD
Trigger: ATCCACATTGCCACCATCCAACAGCAACATGGTATC...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GAGTTCCCAGTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTTTGGACTCAGCTTTaGCTGGTTGTATATTTAATC +
Preference number: 5 (lower is better)
Translates to: EFPVDQAGSGKGPRLPDSLWTQL*LVVYLI
Trigger: GATTAAATATACAACCAGCAAAAGCTGAGTCCAAAG...TGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCACTGGGAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGCTGTTCGGCAGTTGTaGTCAAAAGCTGCACTAGTT +
Preference number: 5 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSAVRQL*SKAALV
Trigger: AACTAGTGCAGCTTTTGACAACAACTGCCGAACAGC...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGGGCTCAGGTTTGGAGTaGATCTTAAATCTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKGSGLE*ILNLSH
Trigger: ATGAGAAAGATTTAAGATCAACTCCAAACCTGAGCC...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGCATCCAGGCTCAGGTTaGGAGTTGATCTTAAATCTT +
Preference number: 5 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLHPGSG*ELILNL
Trigger: AAGATTTAAGATCAACTCCAAACCTGAGCCTGGATG...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGGTTTGGTCATTGGGGTaGGGTTTGTATTACATGGAT +
Preference number: 5 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLVWSLG*GLYYMD
Trigger: ATCCATGTAATACAAACCCAACCCCAATGACCAAAC...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp CAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAACACCTGTCACTGTATTATTaGTCCATGGAATCTGATCGC +
Preference number: 5 (lower is better)
Translates to: QVRVPAYQIHCTLDVSKHLSLYY*SMESDR
Trigger: GCGATCAGATTCCATGGACAAATAATACAGTGACAG...GTGTTTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTAGCTCAGTTTCATCTTaGCCACTAAGGAAGGATACC +
Preference number: 5 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVSSVSS*PLRKDT
Trigger: GGTATCCTTCCTTAGTGGCAAAGATGAAACTGAGCT...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTGATAGCTTGCCGATTTaGGTGTATCAACTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVDSLPI*VYQLLL
Trigger: CAACAGCAGTTGATACACCAAAATCGGCAAGCTATC...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAGATTTGTACCATAGTTaGGTGGATAGGGGAATTGCT +
Preference number: 5 (lower is better)
Translates to: GSGKGPRLPDSLYTGRQQDLYHS*VDRGIA
Trigger: AGCAATTCCCCTATCCACCAAACTATGGTACAAATC...TTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGCATCTGGGCCATCATaGGGTTCATGTTCTGAACAT +
Preference number: 5 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSASGPS*GSCSEH
Trigger: ATGTTCAGAACATGAACCCAATGATGGCCCAGATGC...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTTTGGAACTTGTCGTTTaGGTTCTCCTCCAAAAGCCT +
Preference number: 5 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVLELVV*VLLQKP
Trigger: AGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAA...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACACAACTCACTTCTaGTCCTTCACCCATCTCATC +
Preference number: 5 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSDTTHF*SFTHLI
Trigger: GATGAGATGGGTGAAGGACAAGAAGTGAGTTGTGTC...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp CAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGACGTCAGCAAACACGTACATCGTCATCAGTaGTTGATTTCTCTTGATGCC +
Preference number: 5 (lower is better)
Translates to: QVRVPAYQIHCTLDVSKHVHRHQ*LISLDA
Trigger: GGCATCAAGAGAAATCAACAACTGATGACGATGTAC...GTGTTTGCTGACGTCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407230.5
CDS TCA 90 bp TATTCTGGTGGATACCATGTTGCTGTTGGATGGTGGCAATGTGGATaGACGAGCCACACCATGAGCTGGAGAGATACTAGGATTGACCGA +
Preference number: 5 (lower is better)
Translates to: YSGGYHVAVGWWQCG*TSHTMSWRDTRIDR
Trigger: TCGGTCAATCCTAGTATCTCTCCAGCTCATGGTGTGGCTCGTTCATCCACATTGCCACCATCCAACAGCAACATGGTATCCACCAGAATA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS TCA 90 bp TGTGAACTGGCCTGTCCTTGGTTTAAGGCAACATTGGCTACAATCTaGCTTCCGGGTGAGCATCCGAAACTTCCTTGGCTGTTGCTAGAA +
Preference number: 5 (lower is better)
Translates to: CELACPWFKATLATI*LPGEHPKLPWLLLE
Trigger: TTCTAGCAACAGCCAAGGAAGTTTCGGATGCTCACCCGGAAGTCAGATTGTAGCCAATGTTGCCTTAAACCAAGGACAGGCCAGTTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CCA 90 bp TATGACTGCTGCTATGAAGGTCTGAGCTCTGCTGGCGGTTTATTCTaGTGGATACCATGTTGCTGTTGGATGGTGGCAATGTGGATGAAC +
Preference number: 5 (lower is better)
Translates to: YDCCYEGLSSAGGLF*WIPCCCWMVAMWMN
Trigger: GTTCATCCACATTGCCACCATCCAACAGCAACATGGTATCCACCAGAATAAACCGCCAGCAGAGCTCAGACCTTCATAGCAGCAGTCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGACCTGGGAGACTTCTTaGTTCATAATGAATCCTCAA +
Preference number: 5 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLTWETS*FIMNPQ
Trigger: TTGAGGATTCATTATGAACAAAGAAGTCTCCCAGGT...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGTCACTCCTTGACTACTaGATGAGATGTCTGATTTCT +
Preference number: 5 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLSLLDY*MRCLIS
Trigger: AGAAATCAGACATCTCATCAAGTAGTCAAGGAGTGA...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGTTTACCTGTAGTATCTaGCTTGGTCATAAAGGATTC +
Preference number: 5 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKFTCSI*LGHKGF
Trigger: GAATCCTTTATGACCAAGCAAGATACTACAGGTAAA...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GTGGACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTTTTACCTGTAGTATCTaGCTTGGTCATAAAGGATTC +
Preference number: 5 (lower is better)
Translates to: VDQAGSGKGPRLPDSLYTFTCSI*LGHKGF
Trigger: GAATCCTTTATGACCAAGCAAGATACTACAGGTAAA...AGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTTTGCATGTCTGGACTTaGAGGGTAGCAAAGTTTACA +
Preference number: 5 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVLHVWT*RVAKFT
Trigger: TGTAAACTTTGCTACCCTCAAAGTCCAGACATGCAA...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTAGAATTAGTGTCATCTaGAGGAGAAAGCCCACTGTG +
Preference number: 5 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSRISVI*RRKPTV
Trigger: CACAGTGGGCTTTCTCCTCAAGATGACACTAATTCT...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGATTGAGGCAATCTCTTaGTTATCTTTGGACTCAGCT +
Preference number: 5 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLIEAIS*LSLDSA
Trigger: AGCTGAGTCCAAAGATAACAAAGAGATTGCCTCAAT...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTCAAGACAGGACATCTTaGCAGCTTGTGTCTATATCA +
Preference number: 5 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVQDRTS*QLVSIS
Trigger: TGATATAGACACAAGCTGCAAAGATGTCCTGTCTTG...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGGGCTCAGGTTTGGAGTaGATCTTAAATCTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLGSGLE*ILNLSH
Trigger: ATGAGAAAGATTTAAGATCAACTCCAAACCTGAGCC...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTCATCCAGGCTCAGGTTaGGAGTTGATCTTAAATCTT +
Preference number: 5 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVHPGSG*ELILNL
Trigger: AAGATTTAAGATCAACTCCAAACCTGAGCCTGGATG...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTATCGCCTGTTCCTGGTaGTCCAAATTGGTTATCAAT +
Preference number: 5 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVIACSW*SKLVIN
Trigger: ATTGATAACCAATTTGGACAACCAGGAACAGGCGAT...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GTTGGGACTAAGCGGCGGAGGCGGAGCTTCATCTTCTTCTTGGAACTTGTCGTTCTGTCACTGTATTATTaGTCCATGGAATCTGATCGC +
Preference number: 5 (lower is better)
Translates to: VGTKRRRRSFIFFLELVVLSLYY*SMESDR
Trigger: GCGATCAGATTCCATGGACAAATAATACAGTGACAG...AACGACAAGTTCCAAGAAGAAGATGAAGCTCCGCCTCCGCCGCTTAGTCCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCACCTCTGTCGGTGCTGTaGACTGTACAGTTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPPLSVL*TVQFPL
Trigger: CAGCGGGAACTGTACAGTCAACAGCACCGACAGAGG...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCATGGTGGATAGGGGAATaGCTGTGGAGCACCCTGAGG +
Preference number: 5 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPWWIGE*LWSTLR
Trigger: CCTCAGGGTGCTCCACAGCAATTCCCCTATCCACCA...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTTCTGAGGAGGAGGGATaGGCATCGGCACCATGGAGC +
Preference number: 5 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSSEEEG*ASAPWS
Trigger: GCTCCATGGTGCCGATGCCAATCCCTCCTCCTCAGA...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGGCTCAAGAAATAGATaGTCCAACTGTTCTGCCTTG +
Preference number: 5 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSGSRNR*SNCSAL
Trigger: CAAGGCAGAACAGTTGGACAATCTATTTCTTGAGCC...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCATTGGAACTTGTCGTTTaGGTTCTCCTCCAAAAGCCT +
Preference number: 5 (lower is better)
Translates to: RDTLGQYALDQLEQLFLALELVV*VLLQKP
Trigger: AGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAA...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGTCTTCCTGGGCAGGGTaGGGACTAAGCGGCGGAGGC +
Preference number: 5 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKSSWAG*GLSGGG
Trigger: GCCTCCGCCGCTTAGTCCCAACCCTGCCCAGGAAGA...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GGGCTGCTGATTTCGAGACACATGACAGCCTTTGGTGGACGGGCACAGGCAAAGAGGCAACCCATGAGGTaGTTAAACAAATTCTATTCA +
Preference number: 5 (lower is better)
Translates to: GLLISRHMTAFGGRAQAKRQPMR*LNKFYS
Trigger: TGAATAGAATTTGTTTAACAACCTCATGGGTTGCCT...CTTTGCCTGTGCCCGTCCACCAAAGGCTGTCATGTGTCTCGAAATCAGCAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GACCAGGCTGGTTCAGGTAAGGGTCCCCGCCTACCAGATTCACTGTACACTGGAATAATACTCGTTAATTaGGGCTTTGGCAATTTCTGC +
Preference number: 5 (lower is better)
Translates to: DQAGSGKGPRLPDSLYTGIILVN*GFGNFC
Trigger: GCAGAAATTGCCAAAGCCCAAATTAACGAGTATTAT...TCCAGTGTACAGTGAATCTGGTAGGCGGGGACCCTTACCTGAACCAGCCTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
CDS TCA 90 bp TTTTGGTGTATCAACTGCTGTTGTCCCTGTAATCGCTGCTGTAGTTaGAGTCGAAGCTGGTTAGGTGCAGCCGGAGGTCTGTTTAGAGTT +
Preference number: 5 (lower is better)
Translates to: FWCINCCCPCNRCCS*SRSWLGAAGGLFRV
Trigger: AACTCTAAACAGACCTCCGGCTGCACCTAACCAGCTTCGACTTCAACTACAGCAGCGATTACAGGGACAACAGCAGTTGATACACCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS TCA 90 bp TTGAGCATTCAGGGGTGGCTGAGGTGTAATTTGCTGTTGCATGCCTaGTCTCATATTGATGCCAACAGGAGCAGTTGCTGCAAACTGGTT +
Preference number: 5 (lower is better)
Translates to: LSIQGWLRCNLLLHA*SHIDANRSSCCKLV
Trigger: AACCAGTTTGCAGCAACTGCTCCTGTTGGCATCAATATGAGATCAGGCATGCAACAGCAAATTACACCTCAGCCACCCCTGAATGCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS TCA 90 bp TGCAAAGAGCTCATCTGCATCTGGGCCATCATTGGGTTCATGTTCTaGACATTCGTATTTCCACCTGCCATGGAAACGGTGATGCTCATG +
Preference number: 5 (lower is better)
Translates to: CKELICIWAIIGFMF*TFVFPPAMETVMLM
Trigger: CATGAGCATCACCGTTTCCATGGCAGGTGGAAATACGAATGTTCAGAACATGAACCCAATGATGGCCCAGATGCAGATGAGCTCTTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS GCA 90 bp CCTGTGCAAGACAGGACATCTTTGCAGCTTGTGTCTATATCAGCATaGCGTAACTGCTGTTCGGCAGTTGTTGTCAAAAGCTGCACTAGT +
Preference number: 5 (lower is better)
Translates to: PVQDRTSLQLVSISA*RNCCSAVVVKSCTS
Trigger: ACTAGTGCAGCTTTTGACAACAACTGCCGAACAGCAGTTACGGCATGCTGATATAGACACAAGCTGCAAAGATGTCCTGTCTTGCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS GCA 90 bp CTGGGCCATCATTGGGTTCATGTTCTGAACATTCGTATTTCCACCTaGCATGGAAACGGTGATGCTCATGTTGTTGTATACTCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: LGHHWVHVLNIRIST*HGNGDAHVVVYSWL
Trigger: CAGCCAGGAGTATACAACAACATGAGCATCACCGTTTCCATGGCAGGTGGAAATACGAATGTTCAGAACATGAACCCAATGATGGCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CCA 90 bp CATTCCTGGCATCTGCAAAGAGCTCATCTGCATCTGGGCCATCATTaGGTTCATGTTCTGAACATTCGTATTTCCACCTGCCATGGAAAC +
Preference number: 5 (lower is better)
Translates to: HSWHLQRAHLHLGHH*VHVLNIRISTCHGN
Trigger: GTTTCCATGGCAGGTGGAAATACGAATGTTCAGAACATGAACCCAATGATGGCCCAGATGCAGATGAGCTCTTTGCAGATGCCAGGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTACGAGTCATCACTTCTaGGAACAGCTGTCTGGCATA +
Preference number: 5 (lower is better)
Translates to: SRAVCSRSAGTALSGSDITSHHF*EQLSGI
Trigger: TATGCCAGACAGCTGTTCCAAGAAGTGATGACTCGT...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCATTGCATGTCTGGACTTaGAGGGTAGCAAAGTTTACA +
Preference number: 5 (lower is better)
Translates to: RDTLGQYALDQLEQLFLALHVWT*RVAKFT
Trigger: TGTAAACTTTGCTACCCTCAAAGTCCAGACATGCAA...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTGATACCATGTTGCTGTaGGATGGTGGCAATGTGGAT +
Preference number: 5 (lower is better)
Translates to: SRAVCSRSAGTALSGSDIDTMLL*DGGNVD
Trigger: ATCCACATTGCCACCATCCAACAGCAACATGGTATC...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCATCTGAAAGTCTGTCATaGTTATGCAGAAGCCCTGAA +
Preference number: 5 (lower is better)
Translates to: RDTLGQYALDQLEQLFLASESLS*LCRSPE
Trigger: TTCAGGGCTTCTGCATAACAATGACAGACTTTCAGA...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTGCTGTTCGGCAGTTGTaGTCAAAAGCTGCACTAGTT +
Preference number: 5 (lower is better)
Translates to: SRAVCSRSAGTALSGSDIAVRQL*SKAALV
Trigger: AACTAGTGCAGCTTTTGACAACAACTGCCGAACAGC...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTACTGCTGTTCGGCAGTaGTTGTCAAAAGCTGCACTA +
Preference number: 5 (lower is better)
Translates to: SRAVCSRSAGTALSGSDITAVRQ*LSKAAL
Trigger: TAGTGCAGCTTTTGACAACAACTGCCGAACAGCAGT...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCACAAGACAGGACATCTTaGCAGCTTGTGTCTATATCA +
Preference number: 5 (lower is better)
Translates to: RDTLGQYALDQLEQLFLAQDRTS*QLVSIS
Trigger: TGATATAGACACAAGCTGCAAAGATGTCCTGTCTTG...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCACTGTCACTGTATTATTaGTCCATGGAATCTGATCGC +
Preference number: 5 (lower is better)
Translates to: RDTLGQYALDQLEQLFLALSLYY*SMESDR
Trigger: GCGATCAGATTCCATGGACAAATAATACAGTGACAG...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTTCGGGGAGGTGTTACTaGAACAGGCATCGTCCCCAG +
Preference number: 5 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSSGRCY*NRHRPQ
Trigger: CTGGGGACGATGCCTGTTCAAGTAACACCTCCCCGA...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGATTTGTACCATAGTTaGGTGGATAGGGGAATTGCT +
Preference number: 5 (lower is better)
Translates to: RDTLGQYALDQLEQLFLADLYHS*VDRGIA
Trigger: AGCAATTCCCCTATCCACCAAACTATGGTACAAATC...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTACCATGCTGTTGCGGTaGGCCAAGGATGCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTTMLLR*AKDASG
Trigger: TCCTGAAGCATCCTTGGCCAACCGCAACAGCATGGT...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTGTGATGCTCATGTTGTaGTATACTCCTGGCTGTGCA +
Preference number: 5 (lower is better)
Translates to: SRAVCSRSAGTALSGSDIVMLML*YTPGCA
Trigger: TGCACAGCCAGGAGTATACAACAACATGAGCATCAC...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTGCATCTGGGCCATCATaGGGTTCATGTTCTGAACAT +
Preference number: 5 (lower is better)
Translates to: SRAVCSRSAGTALSGSDIASGPS*GSCSEH
Trigger: ATGTTCAGAACATGAACCCAATGATGGCCCAGATGC...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCACCAACAGATACAGAGTaGCTAGAGAAGCTGATTGTA +
Preference number: 5 (lower is better)
Translates to: RDTLGQYALDQLEQLFLAPTDTE*LEKLIV
Trigger: TACAATCAGCTTCTCTAGCAACTCTGTATCTGTTGG...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp CTAGAGAAGCTGATTGTACACACAAGCTGCCTGGGATTGGGATGGGGAGGGCTGAGGCAACCCATGAGGTaGTTAAACAAATTCTATTCA +
Preference number: 5 (lower is better)
Translates to: LEKLIVHTSCLGLGWGGLRQPMR*LNKFYS
Trigger: TGAATAGAATTTGTTTAACAACCTCATGGGTTGCCT...CAGCCCTCCCCATCCCAATCCCAGGCAGCTTGTGTGTACAATCAGCTTCTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS TCA 90 bp AGCTGGAGAGATACTAGGATTGACCGAGGGATTTACTCGGGGAATTaGCATTCCAGAATTAGTGTCATCTTGAGGAGAAAGCCCACTGTG +
Preference number: 5 (lower is better)
Translates to: SWRDTRIDRGIYSGN*HSRISVILRRKPTV
Trigger: CACAGTGGGCTTTCTCCTCAAGATGACACTAATTCTGGAATGTCAATTCCCCGAGTAAATCCCTCGGTCAATCCTAGTATCTCTCCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS TCA 90 bp TCCTTGGCTGTTGCTAGAATTACTATGACTGCTGCTATGAAGGTCTaGGCTCTGCTGGCGGTTTATTCTGGTGGATACCATGTTGCTGTT +
Preference number: 5 (lower is better)
Translates to: SLAVARITMTAAMKV*ALLAVYSGGYHVAV
Trigger: AACAGCAACATGGTATCCACCAGAATAAACCGCCAGCAGAGCTCAGACCTTCATAGCAGCAGTCATAGTAATTCTAGCAACAGCCAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS TCA 90 bp TGTAAGAGCCGGTGTAGAATTTTATGCCGTTCTGTCAATGAGCTATaGGAAGAGGGACAAGAACCTCCTGAAGAGTTAGCAGAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: CKSRCRILCRSVNEL*EEGQEPPEELAEAE
Trigger: CTCTGCCTCTGCTAACTCTTCAGGAGGTTCTTGTCCCTCTTCTCATAGCTCATTGACAGAACGGCATAAAATTCTACACCGGCTCTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS GCA 90 bp CGAAATATTAGGAGGAAAGGAATTGTTTGGCATCCTGGGCCTTGTTaGCAATCCAGAAGTAACCTGTCTCCTTGGAGACATGAACTGTGC +
Preference number: 5 (lower is better)
Translates to: RNIRRKGIVWHPGPC*QSRSNLSPWRHELC
Trigger: GCACAGTTCATGTCTCCAAGGAGACAGGTTACTTCTGGATTGGCAACAAGGCCCAGGATGCCAAACAATTCCTTTCCTCCTAATATTTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS GCA 90 bp GCTGGTTGTATATTTAATCTGCTAGGTGAATTCTGTGAGCTCATCTaGCTGAGGACTGGAGAACTGGCAGAGAAGCCAACGGAGTTATTG +
Preference number: 5 (lower is better)
Translates to: AGCIFNLLGEFCELI*LRTGELAEKPTELL
Trigger: CAATAACTCCGTTGGCTTCTCTGCCAGTTCTCCAGTCCTCAGGCAGATGAGCTCACAGAATTCACCTAGCAGATTAAATATACAACCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CCA 90 bp CTCCCTGTCGATGATATGAATTCCCATGATGAAAGGTTGCATGTCTaGACTTTGAGGGTAGCAAAGTTTACACTTGGTGTGGGCGCTAAG +
Preference number: 5 (lower is better)
Translates to: LPVDDMNSHDERLHV*TLRVAKFTLGVGAK
Trigger: CTTAGCGCCCACACCAAGTGTAAACTTTGCTACCCTCAAAGTCCAGACATGCAACCTTTCATCATGGGAATTCATATCATCGACAGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTACCTGGGAGACTTCTTaGTTCATAATGAATCCTCAA +
Preference number: 5 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSTWETS*FIMNPQ
Trigger: TTGAGGATTCATTATGAACAAAGAAGTCTCCCAGGT...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGCCTCTTTTCCGTGCTaGATGCCAGTGTGTCACATG +
Preference number: 5 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTASFPC*MPVCHM
Trigger: CATGTGACACACTGGCATCAAGCACGGAAAAGAGGC...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGTACATCGTCATCAGTaGTTGATTTCTCTTGTTCCA +
Preference number: 5 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSVHRHQ*LISLVP
Trigger: TGGAACAAGAGAAATCAACAACTGATGACGATGTAC...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCATCGTCGTGTTGCCTCTaGAGGCCAAGGAACTCCATT +
Preference number: 5 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPSSCCL*RPRNSI
Trigger: AATGGAGTTCCTTGGCCTCAAGAGGCAACACGACGA...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTTCGTCGTGTTGCCTCTaGAGGCCAAGGAACTCCATT +
Preference number: 5 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTSSCCL*RPRNSI
Trigger: AATGGAGTTCCTTGGCCTCAAGAGGCAACACGACGA...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCACGCTGGCAAGCTTCTaGGTTCTCGGTCCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGTLASF*VLGPWL
Trigger: GAGCCAGGGACCGAGAACCAAGAAGCTTGCCAGCGT...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTAACGCTGGCAAGCTTCTaGGTTCTCGGTCCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLTLASF*VLGPWL
Trigger: GAGCCAGGGACCGAGAACCAAGAAGCTTGCCAGCGT...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAAACGCTGGCAAGCTTCTaGGTTCTCGGTCCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: MLRPEEWLQIEISKISEKTLASF*VLGPWL
Trigger: GAGCCAGGGACCGAGAACCAAGAAGCTTGCCAGCGT...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTCCTGTAGTATCTTGCTaGGTCATAAAGGATTCTACA +
Preference number: 5 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSPVVSC*VIKDST
Trigger: TGTAGAATCCTTTATGACCAAGCAAGATACTACAGG...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGGCTCAGGTTTGGAGTaGATCTTAAATCTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: RDTLGQYALDQLEQLFLAGSGLE*ILNLSH
Trigger: ATGAGAAAGATTTAAGATCAACTCCAAACCTGAGCC...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGGCAGGATCTCCGATTaGATGGTTACACTGGTGACC +
Preference number: 5 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPGRISD*MVTLVT
Trigger: GGTCACCAGTGTAACCATCAAATCGGAGATCCTGCC...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCTCGGGGAGGTGTTACTaGAACAGGCATCGTCCCCAG +
Preference number: 5 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGSGRCY*NRHRPQ
Trigger: CTGGGGACGATGCCTGTTCAAGTAACACCTCCCCGA...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTGATAGCTTGCCGATTTaGGTGTATCAACTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: SRAVCSRSAGTALSGSDIDSLPI*VYQLLL
Trigger: CAACAGCAGTTGATACACCAAAATCGGCAAGCTATC...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTACGTTGTGCCAACATTaGAGCATTCAGGGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTTLCQH*SIQGWL
Trigger: CAGCCACCCCTGAATGCTCAAATGTTGGCACAACGT...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAACGTTGTGCCAACATTaGAGCATTCAGGGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPTLCQH*SIQGWL
Trigger: CAGCCACCCCTGAATGCTCAAATGTTGGCACAACGT...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTATCTGAGGAGGAGGGATaGGCATCGGCACCATGGAGC +
Preference number: 5 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLSEEEG*ASAPWS
Trigger: GCTCCATGGTGCCGATGCCAATCCCTCCTCCTCAGA...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp AGGGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAAGCTTCATCTTCTTCTaGGAACTTGTCGTTTTGGTT +
Preference number: 5 (lower is better)
Translates to: RDTLGQYALDQLEQLFLASFIFF*ELVVLV
Trigger: AACCAAAACGACAAGTTCCAAGAAGAAGATGAAGCT...TGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS CCA 90 bp GCTCTGGGCCTCCAGTTTTATTTCCTCAGGAGTGGGTTTGGTCATTaGGGTTGGGTTTGTATTACATGGATCCATCTGTTCTTTCTTTTC +
Preference number: 5 (lower is better)
Translates to: ALGLQFYFLRSGFGH*GWVCITWIHLFFLF
Trigger: GAAAAGAAAGAACAGATGGATCCATGTAATACAAACCCAACCCCAATGACCAAACCCACTCCTGAGGAAATAAAACTGGAGGCCCAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
ENST00000486198.1
CDS-3UTR CAA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTTCGTCGTGTTGCCTCTaGAGGCCAAGGAACTCCATT +
Preference number: 5 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSSSCCL*RPRNSI
Trigger: AATGGAGTTCCTTGGCCTCAAGAGGCAACACGACGA...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GGACACTCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTCTTTGGACTCAGCTTTaGCTGGTTGTATATTTAATC +
Preference number: 5 (lower is better)
Translates to: GHSRAVCSRSAGTALSGSLWTQL*LVVYLI
Trigger: GATTAAATATACAACCAGCAAAAGCTGAGTCCAAAG...ACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGAGTGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTCAAAGGTGGCGTTGCTaGTTGTGGTGGAAATCTCTC +
Preference number: 5 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTQRWRC*LWWKSL
Trigger: GAGAGATTTCCACCACAACAAGCAACGCCACCTTTG...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCTCGGGGAGGTGTTACTaGAACAGGCATCGTCCCCAG +
Preference number: 5 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGSGRCY*NRHRPQ
Trigger: CTGGGGACGATGCCTGTTCAAGTAACACCTCCCCGA...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGTCGGGGAGGTGTTACTaGAACAGGCATCGTCCCCAG +
Preference number: 5 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKSGRCY*NRHRPQ
Trigger: CTGGGGACGATGCCTGTTCAAGTAACACCTCCCCGA...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCACAGTTCCCGCTGACGTaGTGCCAACATTTGAGCATT +
Preference number: 5 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPQFPLT*CQHLSI
Trigger: AATGCTCAAATGTTGGCACAACGTCAGCGGGAACTG...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGTTGTTCCCAAAGCTTaGCTGCCTCATAAGCATGGC +
Preference number: 5 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPVVPKA*LPHKHG
Trigger: GCCATGCTTATGAGGCAGCAAAGCTTTGGGAACAAC...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTATGGTGGATAGGGGAATaGCTGTGGAGCACCCTGAGG +
Preference number: 5 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLWWIGE*LWSTLR
Trigger: CCTCAGGGTGCTCCACAGCAATTCCCCTATCCACCA...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCTGGTGGATAGGGGAATaGCTGTGGAGCACCCTGAGG +
Preference number: 5 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGWWIGE*LWSTLR
Trigger: CCTCAGGGTGCTCCACAGCAATTCCCCTATCCACCA...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATCTGCTCACCATGCTGTaGCGGTTGGCCAAGGATGCT +
Preference number: 5 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNLLTML*RLAKDA
Trigger: AGCATCCTTGGCCAACCGCAACAGCATGGTGAGCAG...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS TCA 90 bp AAGGAGAAGAGTAAGGCTGGGAATAAAGGTTGGGTCTTTCTTCCATaGTCAAAGGTGGCGTTGCTTGTTGTGGTGGAAATCTCTCTGATA +
Preference number: 5 (lower is better)
Translates to: KEKSKAGNKGWVFLP*SKVALLVVVEISLI
Trigger: TATCAGAGAGATTTCCACCACAACAAGCAACGCCACCTTTGATCATGGAAGAAAGACCCAACCTTTATTCCCAGCCTTACTCTTCTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCCCGAGGCCACTCATGTaGAAAAACTTCACACCTGGG +
Preference number: 5 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGPRPLM*KNFTPG
Trigger: CCCAGGTGTGAAGTTTTTCAACATGAGTGGCCTCGG...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTTATTACAGGCACTACTaGTCATGCCAACGGGAGAGC +
Preference number: 5 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSYYRHY*SCQRES
Trigger: GCTCTCCCGTTGGCATGACAAGTAGTGCCTGTAATA...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAAAGCCAACGGAGTTATaGGGTCCTTCATTCATACCC +
Preference number: 5 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPKPTEL*GPSFIP
Trigger: GGGTATGAATGAAGGACCCAATAACTCCGTTGGCTT...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCCTGAATCCAGAGGTTaGCCATCACTAGAGCTGTTG +
Preference number: 5 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSPESRG*PSLELL
Trigger: CAACAGCTCTAGTGATGGCAAACCTCTGGATTCAGG...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGGACATCTTTGCAGCTaGTGTCTATATCAGCATGCC +
Preference number: 5 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPGHLCS*CLYQHA
Trigger: GGCATGCTGATATAGACACAAGCTGCAAAGATGTCC...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTGGCTCAGGTTTGGAGTaGATCTTAAATCTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: SRAVCSRSAGTALSGSDIGSGLE*ILNLSH
Trigger: ATGAGAAAGATTTAAGATCAACTCCAAACCTGAGCC...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGAGTGGGTTTGGTCATaGGGGTTGGGTTTGTATTAC +
Preference number: 5 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTEWVWS*GLGLYY
Trigger: GTAATACAAACCCAACCCCAATGACCAAACCCACTC...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATACCATGCTGTTGCGGTaGGCCAAGGATGCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNTMLLR*AKDASG
Trigger: TCCTGAAGCATCCTTGGCCAACCGCAACAGCATGGT...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAAAAAGTTGGCCTCACCTaGGGGAACCATTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: MLRPEEWLQIEISKISEKKVGLT*GNHSCS
Trigger: GGAGCAGGAATGGTTCCCCAAGGTGAGGCCAACTTT...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
44% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCAAAGTTGGCCTCACCTaGGGGAACCATTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGKVGLT*GNHSCS
Trigger: GGAGCAGGAATGGTTCCCCAAGGTGAGGCCAACTTT...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTAGTTTCCTATCGCTCCTaGCTGCCAGGCCTTCATGTC +
Preference number: 5 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLVSYRS*LPGLHV
Trigger: GACATGAAGGCCTGGCAGCAAGGAGCGATAGGAAAC...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS GCA 90 bp GTAGCAGATTCTTCACAAATTCTGCATGATCCCCCACGTGCAGTATaGTGTAGACGCTCGTATTCATTAATTCCTCCTGATTGTAACCTA +
Preference number: 5 (lower is better)
Translates to: VADSSQILHDPPRAV*CRRSYSLIPPDCNL
Trigger: TAGGTTACAATCAGGAGGAATTAATGAATACGAGCGTCTACAGCATACTGCACGTGGGGGATCATGCAGAATTTGTGAAGAATCTGCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CCA 90 bp AGCTGTCACTGTATTATTTGTCCATGGAATCTGATCGCCTGTTCCTaGTTGTCCAAATTGGTTATCAATTGCTTCCAATTCCAGCTCAGG +
Preference number: 5 (lower is better)
Translates to: SCHCIICPWNLIACS*LSKLVINCFQFQLR
Trigger: CCTGAGCTGGAATTGGAAGCAATTGATAACCAATTTGGACAACCAGGAACAGGCGATCAGATTCCATGGACAAATAATACAGTGACAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CCA 90 bp ATGCCTGATCTCATATTGATGCCAACAGGAGCAGTTGCTGCAAACTaGTTTAAGATAGCTTGCCGATTTTGGTGTATCAACTGCTGTTGT +
Preference number: 5 (lower is better)
Translates to: MPDLILMPTGAVAAN*FKIACRFWCINCCC
Trigger: ACAACAGCAGTTGATACACCAAAATCGGCAAGCTATCTTAAACCAGTTTGCAGCAACTGCTCCTGTTGGCATCAATATGAGATCAGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGCCGAGGCCACTCATGTaGAAAAACTTCACACCTGGG +
Preference number: 5 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKPRPLM*KNFTPG
Trigger: CCCAGGTGTGAAGTTTTTCAACATGAGTGGCCTCGG...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCCCGAGGCCACTCATGTaGAAAAACTTCACACCTGGG +
Preference number: 5 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGPRPLM*KNFTPG
Trigger: CCCAGGTGTGAAGTTTTTCAACATGAGTGGCCTCGG...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATGCCTCTTTTCCGTGCTaGATGCCAGTGTGTCACATG +
Preference number: 5 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNASFPC*MPVCHM
Trigger: CATGTGACACACTGGCATCAAGCACGGAAAAGAGGC...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATCGTCGTGTTGCCTCTaGAGGCCAAGGAACTCCATT +
Preference number: 5 (lower is better)
Translates to: MLRPEEWLQIEISKISEKSSCCL*RPRNSI
Trigger: AATGGAGTTCCTTGGCCTCAAGAGGCAACACGACGA...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCGGCTATTTCGTCGTGTaGCCTCTTGAGGCCAAGGAA +
Preference number: 5 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGGYFVV*PLEAKE
Trigger: TTCCTTGGCCTCAAGAGGCAACACGACGAAATAGCC...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTAGGCTATTTCGTCGTGTaGCCTCTTGAGGCCAAGGAA +
Preference number: 5 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLGYFVV*PLEAKE
Trigger: TTCCTTGGCCTCAAGAGGCAACACGACGAAATAGCC...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TCTAGGGCAGTATGCTCTAGATCAGCTGGAACAGCTCTTTCTGGCAGTGACATTTTTACCTGTAGTATCTaGCTTGGTCATAAAGGATTC +
Preference number: 5 (lower is better)
Translates to: SRAVCSRSAGTALSGSDIFTCSI*LGHKGF
Trigger: GAATCCTTTATGACCAAGCAAGATACTACAGGTAAA...AATGTCACTGCCAGAAAGAGCTGTTCCAGCTGATCTAGAGCATACTGCCCTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTAGAATTAGTGTCATCTaGAGGAGAAAGCCCACTGTG +
Preference number: 5 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTRISVI*RRKPTV
Trigger: CACAGTGGGCTTTCTCCTCAAGATGACACTAATTCT...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCGGAGAGATACTAGGATaGACCGAGGGATTTACTCGG +
Preference number: 5 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGGEILG*TEGFTR
Trigger: CCGAGTAAATCCCTCGGTCAATCCTAGTATCTCTCC...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTTTAGGAGGAAAGGAATaGTTTGGCATCCTGGGCCTT +
Preference number: 5 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSLGGKE*FGILGL
Trigger: AAGGCCCAGGATGCCAAACAATTCCTTTCCTCCTAA...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTACTGCTGTTCGGCAGTaGTTGTCAAAAGCTGCACTA +
Preference number: 5 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSTAVRQ*LSKAAL
Trigger: TAGTGCAGCTTTTGACAACAACTGCCGAACAGCAGT...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCGGCAGGATCTCCGATTaGATGGTTACACTGGTGACC +
Preference number: 5 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGGRISD*MVTLVT
Trigger: GGTCACCAGTGTAACCATCAAATCGGAGATCCTGCC...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAAGGCAGGATCTCCGATTaGATGGTTACACTGGTGACC +
Preference number: 5 (lower is better)
Translates to: MLRPEEWLQIEISKISEKGRISD*MVTLVT
Trigger: GGTCACCAGTGTAACCATCAAATCGGAGATCCTGCC...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTAGCTCAGTTTCATCTTaGCCACTAAGGAAGGATACC +
Preference number: 5 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTSSVSS*PLRKDT
Trigger: GGTATCCTTCCTTAGTGGCAAAGATGAAACTGAGCT...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCCAAAGGTGGCGTTGCTaGTTGTGGTGGAAATCTCTC +
Preference number: 5 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGQRWRC*LWWKSL
Trigger: GAGAGATTTCCACCACAACAAGCAACGCCACCTTTG...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATTGCCTGACCATGCCTaGGAAAGGGCTAGGGAGATT +
Preference number: 5 (lower is better)
Translates to: MLRPEEWLQIEISKISEKLPDHA*ERAREI
Trigger: AATCTCCCTAGCCCTTTCCAAGGCATGGTCAGGCAA...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTAACGTTGTGCCAACATTaGAGCATTCAGGGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLTLCQH*SIQGWL
Trigger: CAGCCACCCCTGAATGCTCAAATGTTGGCACAACGT...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATACGTTGTGCCAACATTaGAGCATTCAGGGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNTLCQH*SIQGWL
Trigger: CAGCCACCCCTGAATGCTCAAATGTTGGCACAACGT...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTAGGATGCTTCAGGATTaGCTGCTAGTTGTGAAAACG +
Preference number: 5 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTRMLQD*LLVVKT
Trigger: CGTTTTCACAACTAGCAGCAAATCCTGAAGCATCCT...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAAGGATGCTTCAGGATTaGCTGCTAGTTGTGAAAACG +
Preference number: 5 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPRMLQD*LLVVKT
Trigger: CGTTTTCACAACTAGCAGCAAATCCTGAAGCATCCT...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTGTGATGCTCATGTTGTaGTATACTCCTGGCTGTGCA +
Preference number: 5 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSVMLML*YTPGCA
Trigger: TGCACAGCCAGGAGTATACAACAACATGAGCATCAC...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTACGGTGATGCTCATGTaGTTGTATACTCCTGGCTGT +
Preference number: 5 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSTVMLM*LYTPGC
Trigger: ACAGCCAGGAGTATACAACAACATGAGCATCACCGT...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTGCATCTGGGCCATCATaGGGTTCATGTTCTGAACAT +
Preference number: 5 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSASGPS*GSCSEH
Trigger: ATGTTCAGAACATGAACCCAATGATGGCCCAGATGC...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATAAACACCTGAACCTGTaGCACCTGCTGGGTTCCATC +
Preference number: 5 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNKHLNL*HLLGSI
Trigger: GATGGAACCCAGCAGGTGCAACAGGTTCAGGTGTTT...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000406961.5
CDS TCA 90 bp GCCTCCAAAAGAAGAGGTCCCAAGGATTCCTTTTCTATCACTCCTTaGCTACTTGATGAGATGTCTGATTTCTGTACATCGTCATCAGTT +
Preference number: 5 (lower is better)
Translates to: ASKRRGPKDSFSITP*LLDEMSDFCTSSSV
Trigger: AACTGATGACGATGTACAGAAATCAGACATCTCATCAAGTAGTCAAGGAGTGATAGAAAAGGAATCCTTGGGACCTCTTCTTTTGGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CCA 90 bp ACTGCTGTTCGGCAGTTGTTGTCAAAAGCTGCACTAGTTTGTGACTaGTTTGAGAGTATTTACTGTCTCCATCTGAAAGTCTGTCATTGT +
Preference number: 5 (lower is better)
Translates to: TAVRQLLSKAALVCD*FESIYCLHLKVCHC
Trigger: ACAATGACAGACTTTCAGATGGAGACAGTAAATACTCTCAAACCAGTCACAAACTAGTGCAGCTTTTGACAACAACTGCCGAACAGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCATCAATGTCACTAATGTaGGCAGACAGTAACTCAGCT +
Preference number: 5 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPSMSLM*ADSNSA
Trigger: AGCTGAGTTACTGTCTGCCAACATTAGTGACATTGA...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAAGGAGAGATACTAGGATaGACCGAGGGATTTACTCGG +
Preference number: 5 (lower is better)
Translates to: MLRPEEWLQIEISKISEKGEILG*TEGFTR
Trigger: CCGAGTAAATCCCTCGGTCAATCCTAGTATCTCTCC...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCGATACCATGTTGCTGTaGGATGGTGGCAATGTGGAT +
Preference number: 5 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGDTMLL*DGGNVD
Trigger: ATCCACATTGCCACCATCCAACAGCAACATGGTATC...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAACTGGTGGATACCATGTaGCTGTTGGATGGTGGCAAT +
Preference number: 5 (lower is better)
Translates to: MLRPEEWLQIEISKISEKLVDTM*LLDGGN
Trigger: ATTGCCACCATCCAACAGCAACATGGTATCCACCAG...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTATATTACAGGCACTACTaGTCATGCCAACGGGAGAGC +
Preference number: 5 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLYYRHY*SCQRES
Trigger: GCTCTCCCGTTGGCATGACAAGTAGTGCCTGTAATA...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGTATTACAGGCACTACTaGTCATGCCAACGGGAGAGC +
Preference number: 5 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKYYRHY*SCQRES
Trigger: GCTCTCCCGTTGGCATGACAAGTAGTGCCTGTAATA...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCAAGCCAACGGAGTTATaGGGTCCTTCATTCATACCC +
Preference number: 5 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGKPTEL*GPSFIP
Trigger: GGGTATGAATGAAGGACCCAATAACTCCGTTGGCTT...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTACCTGAATCCAGAGGTTaGCCATCACTAGAGCTGTTG +
Preference number: 5 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLPESRG*PSLELL
Trigger: CAACAGCTCTAGTGATGGCAAACCTCTGGATTCAGG...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAACCTGAATCCAGAGGTTaGCCATCACTAGAGCTGTTG +
Preference number: 5 (lower is better)
Translates to: MLRPEEWLQIEISKISEKPESRG*PSLELL
Trigger: CAACAGCTCTAGTGATGGCAAACCTCTGGATTCAGG...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCACATCCAGGCTCAGGTTaGGAGTTGATCTTAAATCTT +
Preference number: 5 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPHPGSG*ELILNL
Trigger: AAGATTTAAGATCAACTCCAAACCTGAGCCTGGATG...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCATCATTGGGGTTGGGTTaGTATTACATGGATCCATCT +
Preference number: 5 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPSLGLG*YYMDPS
Trigger: AGATGGATCCATGTAATACAAACCCAACCCCAATGA...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTACAAAGGTGGCGTTGCTaGTTGTGGTGGAAATCTCTC +
Preference number: 5 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLQRWRC*LWWKSL
Trigger: GAGAGATTTCCACCACAACAAGCAACGCCACCTTTG...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAACAAAGGTGGCGTTGCTaGTTGTGGTGGAAATCTCTC +
Preference number: 5 (lower is better)
Translates to: MLRPEEWLQIEISKISEKQRWRC*LWWKSL
Trigger: GAGAGATTTCCACCACAACAAGCAACGCCACCTTTG...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATCAAAGGTGGCGTTGCTaGTTGTGGTGGAAATCTCTC +
Preference number: 5 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNQRWRC*LWWKSL
Trigger: GAGAGATTTCCACCACAACAAGCAACGCCACCTTTG...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATCAGTTCCCGCTGACGTaGTGCCAACATTTGAGCATT +
Preference number: 5 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNQFPLT*CQHLSI
Trigger: AATGCTCAAATGTTGGCACAACGTCAGCGGGAACTG...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTAGTTGTTCCCAAAGCTTaGCTGCCTCATAAGCATGGC +
Preference number: 5 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLVVPKA*LPHKHG
Trigger: GCCATGCTTATGAGGCAGCAAAGCTTTGGGAACAAC...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTTTGGAACTTGTCGTTTaGGTTCTCCTCCAAAAGCCT +
Preference number: 5 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSLELVV*VLLQKP
Trigger: AGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAA...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTTCTTCTTCTTGGAACTaGTCGTTTTGGTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSSSSWN*SFWFSS
Trigger: GGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGA...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTTCACTCCTTGACTACTaGATGAGATGTCTGATTTCT +
Preference number: 5 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTSLLDY*MRCLIS
Trigger: AGAAATCAGACATCTCATCAAGTAGTCAAGGAGTGA...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCACGAGTCATCACTTCTaGGAACAGCTGTCTGGCATA +
Preference number: 5 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGTSHHF*EQLSGI
Trigger: TATGCCAGACAGCTGTTCCAAGAAGTGATGACTCGT...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTTTGCATGTCTGGACTTaGAGGGTAGCAAAGTTTACA +
Preference number: 5 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSLHVWT*RVAKFT
Trigger: TGTAAACTTTGCTACCCTCAAAGTCCAGACATGCAA...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCAGAATTAGTGTCATCTaGAGGAGAAAGCCCACTGTG +
Preference number: 5 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGRISVI*RRKPTV
Trigger: CACAGTGGGCTTTCTCCTCAAGATGACACTAATTCT...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATTTAGGAGGAAAGGAATaGTTTGGCATCCTGGGCCTT +
Preference number: 5 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNLGGKE*FGILGL
Trigger: AAGGCCCAGGATGCCAAACAATTCCTTTCCTCCTAA...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATAAGCCAACGGAGTTATaGGGTCCTTCATTCATACCC +
Preference number: 5 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNKPTEL*GPSFIP
Trigger: GGGTATGAATGAAGGACCCAATAACTCCGTTGGCTT...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTATTGAGGCAATCTCTTaGTTATCTTTGGACTCAGCT +
Preference number: 5 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTIEAIS*LSLDSA
Trigger: AGCTGAGTCCAAAGATAACAAAGAGATTGCCTCAAT...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAAGCTGTTCGGCAGTTGTaGTCAAAAGCTGCACTAGTT +
Preference number: 5 (lower is better)
Translates to: MLRPEEWLQIEISKISEKAVRQL*SKAALV
Trigger: AACTAGTGCAGCTTTTGACAACAACTGCCGAACAGC...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTAACTGCTGTTCGGCAGTaGTTGTCAAAAGCTGCACTA +
Preference number: 5 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLTAVRQ*LSKAAL
Trigger: TAGTGCAGCTTTTGACAACAACTGCCGAACAGCAGT...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGGGACATCTTTGCAGCTaGTGTCTATATCAGCATGCC +
Preference number: 5 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKGHLCS*CLYQHA
Trigger: GGCATGCTGATATAGACACAAGCTGCAAAGATGTCC...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAAGGACATCTTTGCAGCTaGTGTCTATATCAGCATGCC +
Preference number: 5 (lower is better)
Translates to: MLRPEEWLQIEISKISEKGHLCS*CLYQHA
Trigger: GGCATGCTGATATAGACACAAGCTGCAAAGATGTCC...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAAGACAGGACATCTTaGCAGCTTGTGTCTATATCA +
Preference number: 5 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSQDRTS*QLVSIS
Trigger: TGATATAGACACAAGCTGCAAAGATGTCCTGTCTTG...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCATCCAGGCTCAGGTTaGGAGTTGATCTTAAATCTT +
Preference number: 5 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSHPGSG*ELILNL
Trigger: AAGATTTAAGATCAACTCCAAACCTGAGCCTGGATG...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTTCATTGGGGTTGGGTTaGTATTACATGGATCCATCT +
Preference number: 5 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSSLGLG*YYMDPS
Trigger: AGATGGATCCATGTAATACAAACCCAACCCCAATGA...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTGTTTGGTCATTGGGGTaGGGTTTGTATTACATGGAT +
Preference number: 5 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSVWSLG*GLYYMD
Trigger: ATCCATGTAATACAAACCCAACCCCAATGACCAAAC...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCTGTCACTGTATTATTaGTCCATGGAATCTGATCGC +
Preference number: 5 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSLSLYY*SMESDR
Trigger: GCGATCAGATTCCATGGACAAATAATACAGTGACAG...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCATGCCTGATCTCATATaGATGCCAACAGGAGCAGTT +
Preference number: 5 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGMPDLI*MPTGAV
Trigger: AACTGCTCCTGTTGGCATCAATATGAGATCAGGCAT...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCGTGGGGTTCCTGGATTaGTACCATAGTTTGGTGGAT +
Preference number: 5 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGVGFLD*YHSLVD
Trigger: ATCCACCAAACTATGGTACAAATCCAGGAACCCCAC...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATGTGGGGTTCCTGGATTaGTACCATAGTTTGGTGGAT +
Preference number: 5 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNVGFLD*YHSLVD
Trigger: ATCCACCAAACTATGGTACAAATCCAGGAACCCCAC...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTAACGGTGATGCTCATGTaGTTGTATACTCCTGGCTGT +
Preference number: 5 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLTVMLM*LYTPGC
Trigger: ACAGCCAGGAGTATACAACAACATGAGCATCACCGT...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGACGGTGATGCTCATGTaGTTGTATACTCCTGGCTGT +
Preference number: 5 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKTVMLM*LYTPGC
Trigger: ACAGCCAGGAGTATACAACAACATGAGCATCACCGT...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGAACTCTTCTGTCTTCTaGTCCTGGGTTCCATCTGCT +
Preference number: 5 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKNSSVF*SWVPSA
Trigger: AGCAGATGGAACCCAGGACAAGAAGACAGAAGAGTT...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
CDS-3UTR CAA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATAACTCTTCTGTCTTCTaGTCCTGGGTTCCATCTGCT +
Preference number: 5 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNNSSVF*SWVPSA
Trigger: AGCAGATGGAACCCAGGACAAGAAGACAGAAGAGTT...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAAGCTTCATCTTCTTCTaGGAACTTGTCGTTTTGGTT +
Preference number: 5 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPSFIFF*ELVVLV
Trigger: AACCAAAACGACAAGTTCCAAGAAGAAGATGAAGCT...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCCAACAGATACAGAGTaGCTAGAGAAGCTGATTGTA +
Preference number: 5 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSPTDTE*LEKLIV
Trigger: TACAATCAGCTTCTCTAGCAACTCTGTATCTGTTGG...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATGACACAACTCACTTCTaGTCCTTCACCCATCTCATC +
Preference number: 5 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNDTTHF*SFTHLI
Trigger: GATGAGATGGGTGAAGGACAAGAAGTGAGTTGTGTC...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATACGAGTCATCACTTCTaGGAACAGCTGTCTGGCATA +
Preference number: 5 (lower is better)
Translates to: LRPEEWLQIEISKISEKYTSHHF*EQLSGI
Trigger: TATGCCAGACAGCTGTTCCAAGAAGTGATGACTCGT...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATGCATCCGAAACTTCCTaGGCTGTTGCTAGAATTACT +
Preference number: 5 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNASETS*AVARIT
Trigger: AGTAATTCTAGCAACAGCCAAGGAAGTTTCGGATGC...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTAGCATCCGAAACTTCCTaGGCTGTTGCTAGAATTACT +
Preference number: 5 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLASETS*AVARIT
Trigger: AGTAATTCTAGCAACAGCCAAGGAAGTTTCGGATGC...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCGCATCCGAAACTTCCTaGGCTGTTGCTAGAATTACT +
Preference number: 5 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGASETS*AVARIT
Trigger: AGTAATTCTAGCAACAGCCAAGGAAGTTTCGGATGC...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATTTAGGAGGAAAGGAATaGTTTGGCATCCTGGGCCTT +
Preference number: 5 (lower is better)
Translates to: LRPEEWLQIEISKISEKYLGGKE*FGILGL
Trigger: AAGGCCCAGGATGCCAAACAATTCCTTTCCTCCTAA...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATGGACATCTTTGCAGCTaGTGTCTATATCAGCATGCC +
Preference number: 5 (lower is better)
Translates to: LRPEEWLQIEISKISEKYGHLCS*CLYQHA
Trigger: GGCATGCTGATATAGACACAAGCTGCAAAGATGTCC...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCGTTTGGTCATTGGGGTaGGGTTTGTATTACATGGAT +
Preference number: 5 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGVWSLG*GLYYMD
Trigger: ATCCATGTAATACAAACCCAACCCCAATGACCAAAC...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATGAGTGGGTTTGGTCATaGGGGTTGGGTTTGTATTAC +
Preference number: 5 (lower is better)
Translates to: LRPEEWLQIEISKISEKYEWVWS*GLGLYY
Trigger: GTAATACAAACCCAACCCCAATGACCAAACCCACTC...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TGCTCCAAATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTTCCTGGTTGTCCAAATaGGTTATCAATTGCTTCCAA +
Preference number: 5 (lower is better)
Translates to: CSKCYDLKNGCRLRYQKSSWLSK*VINCFQ
Trigger: TTGGAAGCAATTGATAACCAATTTGGACAACCAGGA...AGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCATTTGGAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTAGATAGCTTGCCGATTTaGGTGTATCAACTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLDSLPI*VYQLLL
Trigger: CAACAGCAGTTGATACACCAAAATCGGCAAGCTATC...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAAATGCCTGATCTCATATaGATGCCAACAGGAGCAGTT +
Preference number: 5 (lower is better)
Translates to: MLRPEEWLQIEISKISEKMPDLI*MPTGAV
Trigger: AACTGCTCCTGTTGGCATCAATATGAGATCAGGCAT...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGATGCCTGATCTCATATaGATGCCAACAGGAGCAGTT +
Preference number: 5 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKMPDLI*MPTGAV
Trigger: AACTGCTCCTGTTGGCATCAATATGAGATCAGGCAT...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATGCCTGATCTCATATaGATGCCAACAGGAGCAGTT +
Preference number: 5 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNMPDLI*MPTGAV
Trigger: AACTGCTCCTGTTGGCATCAATATGAGATCAGGCAT...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATGTGGGGTTCCTGGATTaGTACCATAGTTTGGTGGAT +
Preference number: 5 (lower is better)
Translates to: LRPEEWLQIEISKISEKYVGFLD*YHSLVD
Trigger: ATCCACCAAACTATGGTACAAATCCAGGAACCCCAC...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAAAGGATGCTTCAGGATTaGCTGCTAGTTGTGAAAACG +
Preference number: 5 (lower is better)
Translates to: MLRPEEWLQIEISKISEKRMLQD*LLVVKT
Trigger: CGTTTTCACAACTAGCAGCAAATCCTGAAGCATCCT...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATCTGGTTCTGGACAGCTaGACTGAACACATTGTTGTT +
Preference number: 5 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNLVLDS*TEHIVV
Trigger: AACAACAATGTGTTCAGTCAAGCTGTCCAGAACCAG...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTACTGGTTCTGGACAGCTaGACTGAACACATTGTTGTT +
Preference number: 5 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLLVLDS*TEHIVV
Trigger: AACAACAATGTGTTCAGTCAAGCTGTCCAGAACCAG...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCCTGGTTCTGGACAGCTaGACTGAACACATTGTTGTT +
Preference number: 5 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGLVLDS*TEHIVV
Trigger: AACAACAATGTGTTCAGTCAAGCTGTCCAGAACCAG...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAAGGCTCAAGAAATAGATaGTCCAACTGTTCTGCCTTG +
Preference number: 5 (lower is better)
Translates to: MLRPEEWLQIEISKISEKGSRNR*SNCSAL
Trigger: CAAGGCAGAACAGTTGGACAATCTATTTCTTGAGCC...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATGGCTCAAGAAATAGATaGTCCAACTGTTCTGCCTTG +
Preference number: 5 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNGSRNR*SNCSAL
Trigger: CAAGGCAGAACAGTTGGACAATCTATTTCTTGAGCC...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGTCTTCTTCTTGGAACTaGTCGTTTTGGTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKSSSWN*SFWFSS
Trigger: GGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGA...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTAGGCAACCCATGAGGTaGTTAAACAAATTCTATTCA +
Preference number: 5 (lower is better)
Translates to: LSFWFSSKSLHPDKKPMTRQPMR*LNKFYS
Trigger: TGAATAGAATTTGTTTAACAACCTCATGGGTTGCCT...AGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TCATCTTCTTCTTGGAACTTGTCGTTTTGGTTCTCCTCCAAAAGCCTTCATCCAATAATACTCGTTAATTaGGGCTTTGGCAATTTCTGC +
Preference number: 5 (lower is better)
Translates to: SSSSWNLSFWFSSKSLHPIILVN*GFGNFC
Trigger: GCAGAAATTGCCAAAGCCCAAATTAACGAGTATTAT...TGGATGAAGGCTTTTGGAGGAGAACCAAAACGACAAGTTCCAAGAAGAAGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS TCA 90 bp GGTAACTTCTTTTGGAAGCAAAGTTGCCTACTGCATGATCTTGCTTaGTGGTCCTTGATTTTATCATCAGAGTCAGTTCCAGTTACATTT +
Preference number: 5 (lower is better)
Translates to: GNFFWKQSCLLHDLA*WSLILSSESVPVTF
Trigger: AAATGTAACTGGAACTGACTCTGATGATAAAATCAAGGACCATCAAGCAAGATCATGCAGTAGGCAACTTTGCTTCCAAAAGAAGTTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348332.8
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
ENST00000469850.5
ENST00000496333.5
CDS CCA 90 bp AGACGCTCGTATTCATTAATTCCTCCTGATTGTAACCTAAGTAGCTaGTTACATTCTCTGACACAAATACAATTCTCCCTTCACAGTTCA +
Preference number: 5 (lower is better)
Translates to: RRSYSLIPPDCNLSS*LHSLTQIQFSLHSS
Trigger: TGAACTGTGAAGGGAGAATTGTATTTGTGTCAGAGAATGTAACCAGCTACTTAGGTTACAATCAGGAGGAATTAATGAATACGAGCGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CCA 90 bp TTGATTTTATCATCAGAGTCAGTTCCAGTTACATTTCCATTAGTATaGATAGATCTCAGCATCCAACTGCCCAAAGGGGTGTTAGCAAAA +
Preference number: 5 (lower is better)
Translates to: LILSSESVPVTFPLV*IDLSIQLPKGVLAK
Trigger: TTTTGCTAACACCCCTTTGGGCAGTTGGATGCTGAGATCTATCCATACTAATGGAAATGTAACTGGAACTGACTCTGATGATAAAATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405141.5
CDS-3UTR CAA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCACCTGGGAGACTTCTTaGTTCATAATGAATCCTCAA +
Preference number: 5 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGTWETS*FIMNPQ
Trigger: TTGAGGATTCATTATGAACAAAGAAGTCTCCCAGGT...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATCAATGTCACTAATGTaGGCAGACAGTAACTCAGCT +
Preference number: 5 (lower is better)
Translates to: MLRPEEWLQIEISKISEKSMSLM*ADSNSA
Trigger: AGCTGAGTTACTGTCTGCCAACATTAGTGACATTGA...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGTCAATGTCACTAATGTaGGCAGACAGTAACTCAGCT +
Preference number: 5 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKSMSLM*ADSNSA
Trigger: AGCTGAGTTACTGTCTGCCAACATTAGTGACATTGA...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATTGCATGTCTGGACTTaGAGGGTAGCAAAGTTTACA +
Preference number: 5 (lower is better)
Translates to: MLRPEEWLQIEISKISEKLHVWT*RVAKFT
Trigger: TGTAAACTTTGCTACCCTCAAAGTCCAGACATGCAA...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCATTGAGGCAATCTCTTaGTTATCTTTGGACTCAGCT +
Preference number: 5 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGIEAIS*LSLDSA
Trigger: AGCTGAGTCCAAAGATAACAAAGAGATTGCCTCAAT...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATTCTGAAAGTCTGTCATaGTTATGCAGAAGCCCTGAA +
Preference number: 5 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNSESLS*LCRSPE
Trigger: TTCAGGGCTTCTGCATAACAATGACAGACTTTCAGA...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTACAAGACAGGACATCTTaGCAGCTTGTGTCTATATCA +
Preference number: 5 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLQDRTS*QLVSIS
Trigger: TGATATAGACACAAGCTGCAAAGATGTCCTGTCTTG...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCGGCTCAGGTTTGGAGTaGATCTTAAATCTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGGSGLE*ILNLSH
Trigger: ATGAGAAAGATTTAAGATCAACTCCAAACCTGAGCC...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288599.9
ENST00000405141.5
ENST00000407230.5
CDS-3UTR CAA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAACATCCAGGCTCAGGTTaGGAGTTGATCTTAAATCTT +
Preference number: 5 (lower is better)
Translates to: MLRPEEWLQIEISKISEKHPGSG*ELILNL
Trigger: AAGATTTAAGATCAACTCCAAACCTGAGCCTGGATG...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATTCATTGGGGTTGGGTTaGTATTACATGGATCCATCT +
Preference number: 5 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNSLGLG*YYMDPS
Trigger: AGATGGATCCATGTAATACAAACCCAACCCCAATGA...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGATCGCCTGTTCCTGGTaGTCCAAATTGGTTATCAAT +
Preference number: 5 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKIACSW*SKLVIN
Trigger: ATTGATAACCAATTTGGACAACCAGGAACAGGCGAT...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATCGCCTGTTCCTGGTaGTCCAAATTGGTTATCAAT +
Preference number: 5 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNIACSW*SKLVIN
Trigger: ATTGATAACCAATTTGGACAACCAGGAACAGGCGAT...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATATGCCTGATCTCATATaGATGCCAACAGGAGCAGTT +
Preference number: 5 (lower is better)
Translates to: LRPEEWLQIEISKISEKYMPDLI*MPTGAV
Trigger: AACTGCTCCTGTTGGCATCAATATGAGATCAGGCAT...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATGATTTGTACCATAGTTaGGTGGATAGGGGAATTGCT +
Preference number: 5 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNDLYHS*VDRGIA
Trigger: AGCAATTCCCCTATCCACCAAACTATGGTACAAATC...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATTCCTTTCTCTTTCTCTaGCCTATTAAACCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNSFLFL*PIKPLL
Trigger: GAGCAGAGGTTTAATAGGCAAGAGAAAGAGAAAGGA...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000405141.5
CDS-3UTR CAA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCGTACATCGTCATCAGTaGTTGATTTCTCTTGTTCCA +
Preference number: 5 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGVHRHQ*LISLVP
Trigger: TGGAACAAGAGAAATCAACAACTGATGACGATGTAC...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGGTACATCGTCATCAGTaGTTGATTTCTCTTGTTCCA +
Preference number: 5 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKVHRHQ*LISLVP
Trigger: TGGAACAAGAGAAATCAACAACTGATGACGATGTAC...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATCCTGTAGTATCTTGCTaGGTCATAAAGGATTCTACA +
Preference number: 5 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNPVVSC*VIKDST
Trigger: TGTAGAATCCTTTATGACCAAGCAAGATACTACAGG...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAACCTGTAGTATCTTGCTaGGTCATAAAGGATTCTACA +
Preference number: 5 (lower is better)
Translates to: MLRPEEWLQIEISKISEKPVVSC*VIKDST
Trigger: TGTAGAATCCTTTATGACCAAGCAAGATACTACAGG...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCATTGAGGCAATCTCTTaGTTATCTTTGGACTCAGCT +
Preference number: 5 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGIEAIS*LSLDSA
Trigger: AGCTGAGTCCAAAGATAACAAAGAGATTGCCTCAAT...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGATTGAGGCAATCTCTTaGTTATCTTTGGACTCAGCT +
Preference number: 5 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKIEAIS*LSLDSA
Trigger: AGCTGAGTCCAAAGATAACAAAGAGATTGCCTCAAT...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATTCTGAAAGTCTGTCATaGTTATGCAGAAGCCCTGAA +
Preference number: 5 (lower is better)
Translates to: LRPEEWLQIEISKISEKYSESLS*LCRSPE
Trigger: TTCAGGGCTTCTGCATAACAATGACAGACTTTCAGA...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATTCCTGGTTGTCCAAATaGGTTATCAATTGCTTCCAA +
Preference number: 5 (lower is better)
Translates to: CYDLKNGCRLRYQKSQKNSWLSK*VINCFQ
Trigger: TTGGAAGCAATTGATAACCAATTTGGACAACCAGGA...ATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGTCCTGGTTGTCCAAATaGGTTATCAATTGCTTCCAA +
Preference number: 5 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKSWLSK*VINCFQ
Trigger: TTGGAAGCAATTGATAACCAATTTGGACAACCAGGA...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCTCCTGGTTGTCCAAATaGGTTATCAATTGCTTCCAA +
Preference number: 5 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGSWLSK*VINCFQ
Trigger: TTGGAAGCAATTGATAACCAATTTGGACAACCAGGA...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp TCCTCCAAAAGCCTTCATCCAGATAAGAAGCCAATGACTGATTACAAAAATAAGAGCTTCATCTTCTTCTaGGAACTTGTCGTTTTGGTT +
Preference number: 5 (lower is better)
Translates to: SSKSLHPDKKPMTDYKNKSFIFF*ELVVLV
Trigger: AACCAAAACGACAAGTTCCAAGAAGAAGATGAAGCT...CTTATTTTTGTAATCAGTCATTGGCTTCTTATCTGGATGAAGGCTTTTGGAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCAGGCAACCCATGAGGTaGTTAAACAAATTCTATTCA +
Preference number: 5 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGRQPMR*LNKFYS
Trigger: TGAATAGAATTTGTTTAACAACCTCATGGGTTGCCT...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
CDS-3UTR CAA 90 bp AAATTTCACATTCCTTTAAAAGTGGTTATTCAGTCAGTAGCTGCTGAAGGAGGCATAATACTCGTTAATTaGGGCTTTGGCAATTTCTGC +
Preference number: 5 (lower is better)
Translates to: KFHIPLKVVIQSVAAEGGIILVN*GFGNFC
Trigger: GCAGAAATTGCCAAAGCCCAAATTAACGAGTATTAT...GCCTCCTTCAGCAGCTACTGACTGAATAACCACTTTTAAAGGAATGTGAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288599.9
ENST00000405141.5
CDS-3UTR CAA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATCATCGTCATCAGTTGTaGATTTCTCTTGATGCCAGT +
Preference number: 5 (lower is better)
Translates to: LRPEEWLQIEISKISEKYHRHQL*ISLDAS
Trigger: ACTGGCATCAAGAGAAATCAACAACTGATGACGATG...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000407230.5
CDS-3UTR CAA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATACCTGGGAGACTTCTTaGTTCATAATGAATCCTCAA +
Preference number: 5 (lower is better)
Translates to: LRPEEWLQIEISKISEKYTWETS*FIMNPQ
Trigger: TTGAGGATTCATTATGAACAAAGAAGTCTCCCAGGT...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCTTTACCTGTAGTATCTaGCTTGGTCATAAAGGATTC +
Preference number: 5 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGFTCSI*LGHKGF
Trigger: GAATCCTTTATGACCAAGCAAGATACTACAGGTAAA...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp ATATACTCATTTCGTCCTCTTTCCTGGAGGCATCTTGGTTTAAATCCATCTTTACTTTGGACTCAGCTTTaGCTGGTTGTATATTTAATC +
Preference number: 5 (lower is better)
Translates to: IYSFRPLSWRHLGLNPSLLWTQL*LVVYLI
Trigger: GATTAAATATACAACCAGCAAAAGCTGAGTCCAAAG...TAAAGATGGATTTAAACCAAGATGCCTCCAGGAAAGAGGACGAAATGAGTATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp ATGCTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAACTTTGGACTCAGCTTTaGCTGGTTGTATATTTAATC +
Preference number: 5 (lower is better)
Translates to: MLRPEEWLQIEISKISEKLWTQL*LVVYLI
Trigger: GATTAAATATACAACCAGCAAAAGCTGAGTCCAAAG...TTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAGCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS-3UTR CAA 90 bp GCTTCAGGGATGCTTTATTATCCTTTTATAATACTCGTTAATTTGGGCTTTGGCCTTTGGACTCAGCTTTaGCTGGTTGTATATTTAATC +
Preference number: 5 (lower is better)
Translates to: ASGMLYYPFIILVNLGFGLWTQL*LVVYLI
Trigger: GATTAAATATACAACCAGCAAAAGCTGAGTCCAAAG...GCCAAAGCCCAAATTAACGAGTATTATAAAAGGATAATAAAGCATCCCTGAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATAGCTTCATCTTCTTCTaGGAACTTGTCGTTTTGGTT +
Preference number: 5 (lower is better)
Translates to: LRPEEWLQIEISKISEKYSFIFF*ELVVLV
Trigger: AACCAAAACGACAAGTTCCAAGAAGAAGATGAAGCT...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS-3UTR CAA 90 bp CTACGACCTGAAGAATGGCTGCAGATTGAGATATCAAAAATCTCAGAAAAATATATAATACTCGTTAATTaGGGCTTTGGCAATTTCTGC +
Preference number: 5 (lower is better)
Translates to: LRPEEWLQIEISKISEKYIILVN*GFGNFC
Trigger: GCAGAAATTGCCAAAGCCCAAATTAACGAGTATTAT...ATATTTTTCTGAGATTTTTGATATCTCAATCTGCAGCCATTCTTCAGGTCGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000288599.9
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS GCA 72 bp AGCGCGCCGGGGTCAAACCCAAGCGCCGTCGAGGGCTaGGCCGACGGAGAGGGACGCCGCGGTCGCCCCCAT +
Preference number: 6 (lower is better)
Translates to: SAPGSNPSAVEG*ADGEGRRGRPH
Trigger: ATGGGGGCGACCGCGGCGTCCCTCTCCGTCGGCGCAGCCCTCGACGGCGCTTGGGTTTGACCCCGGCGCGCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000405141.5
ENST00000406961.5
ENST00000469850.5
ENST00000496333.5
CDS TCA 72 bp CCATTTCGCGGTCCCGGCAGGCGAGATTCCGAGAGGTaGGCGGGCCGGCCAAGGTCACGGCGTCGTCGGGGC +
Preference number: 6 (lower is better)
Translates to: PFRGPGRRDSER*AGRPRSRRRRG
Trigger: GCCCCGACGACGCCGTGACCTTGGCCGGCCCGCTCACCTCTCGGAATCTCGCCTGCCGGGACCGCGAAATGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406961.5
ENST00000496333.5
CDS TCA 72 bp CTCAGCAAATCGCGTCAGACTCCCGCTCGCCCGGCCTaGAGAACAGGCATTTCAGCCGCTCTCCGCGGCCGC +
Preference number: 6 (lower is better)
Translates to: LSKSRQTPARPA*RTGISAALRGR
Trigger: GCGGCCGCGGAGAGCGGCTGAAATGCCTGTTCTTCAGGCCGGGCGAGCGGGAGTCTGACGCGATTTGCTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348332.8
CDS CAA 90 bp GGCATCGGCACCATGGAGCTCCCAGGGCTTAGAGATGGAGCAAAGTaGGCCTCACCTTGGGGAACCATTCCTGCTCCTGGATACTGGAAG +
Preference number: 6 (lower is better)
Translates to: GIGTMELPGLRDGAK*ASPWGTIPAPGYWK
Trigger: CTTCCAGTATCCAGGAGCAGGAATGGTTCCCCAAGGTGAGGCCAACTTTGCTCCATCTCTAAGCCCTGGGAGCTCCATGGTGCCGATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS TCA 72 bp TCCTATCGCTCCTTGCTGCCAGGCCTTCATGTCTGGTaGCTGATACCCGGAGGCAGGTGGAGTTTGCTGGAG +
Preference number: 6 (lower is better)
Translates to: SYRSLLPGLHVW*LIPGGRWSLLE
Trigger: CTCCAGCAAACTCCACCTGCCTCCGGGTATCAGTCACCAGACATGAAGGCCTGGCAGCAAGGAGCGATAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS TCA 72 bp ATCGCTCCTTGCTGCCAGGCCTTCATGTCTGGTGACTaGTACCCGGAGGCAGGTGGAGTTTGCTGGAGAAGA +
Preference number: 6 (lower is better)
Translates to: IAPCCQAFMSGD*YPEAGGVCWRR
Trigger: TCTTCTCCAGCAAACTCCACCTGCCTCCGGGTATCAGTCACCAGACATGAAGGCCTGGCAGCAAGGAGCGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CCA 72 bp CCATGGAGCTCCCAGGGCTTAGAGATGGAGCAAAGTTaGCCTCACCTTGGGGAACCATTCCTGCTCCTGGAT +
Preference number: 6 (lower is better)
Translates to: PWSSQGLEMEQS*PHLGEPFLLLD
Trigger: ATCCAGGAGCAGGAATGGTTCCCCAAGGTGAGGCCAACTTTGCTCCATCTCTAAGCCCTGGGAGCTCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS TCA 72 bp CCTGGCTGTGCAGGCGTGGGCTGGTTCTGGACAGCTTaGCTGAACACATTGTTGTTTCCTATCGCTCCTTGC +
Preference number: 6 (lower is better)
Translates to: PGCAGVGWFWTA*LNTLLFPIAPC
Trigger: GCAAGGAGCGATAGGAAACAACAATGTGTTCAGTCAAGCTGTCCAGAACCAGCCCACGCCTGCACAGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CAA 72 bp CTGTCGGTGCTGTTGACTGTACAGTTCCCGCTGACGTaGTGCCAACATTTGAGCATTCAGGGGTGGCTGAGG +
Preference number: 6 (lower is better)
Translates to: LSVLLTVQFPLT*CQHLSIQGWLR
Trigger: CCTCAGCCACCCCTGAATGCTCAAATGTTGGCACAACGTCAGCGGGAACTGTACAGTCAACAGCACCGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS TCA 72 bp GGCAACTGTGCTGCCTTCTCCAGCGTGGGCAGTAACTaGTCAAACTGGTCAAGGTCAGCTGTAAACTGGCTC +
Preference number: 6 (lower is better)
Translates to: GNCAAFSSVGSN*SNWSRSAVNWL
Trigger: GAGCCAGTTTACAGCTGACCTTGACCAGTTTGATCAGTTACTGCCCACGCTGGAGAAGGCAGCACAGTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
ENST00000486198.1
CDS GCA 72 bp GAGGTCTGTTTAGAGTTTGCCTGGGCTGCATGCCCATaGCAGGTGAAAAAGCACCTCGGGGAGGTGTTACTT +
Preference number: 6 (lower is better)
Translates to: EVCLEFAWAACP*QVKKHLGEVLL
Trigger: AAGTAACACCTCCCCGAGGTGCTTTTTCACCTGGCATGGGCATGCAGCCCAGGCAAACTCTAAACAGACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CCA 72 bp CACATAAGCCTGGCAACTGTGCTGCCTTCTCCAGCGTaGGCAGTAACTGATCAAACTGGTCAAGGTCAGCTG +
Preference number: 6 (lower is better)
Translates to: HISLATVLPSPA*AVTDQTGQGQL
Trigger: CAGCTGACCTTGACCAGTTTGATCAGTTACTGCCCACGCTGGAGAAGGCAGCACAGTTGCCAGGCTTATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
ENST00000486198.1
CDS CCA 72 bp CCAGCTCAGGTAATCTATTTAGCCTGGAAGTGGGTCTaGCAGTGGCGGACTGAAGTGAAGCTGGCAGGATCT +
Preference number: 6 (lower is better)
Translates to: PAQVIYLAWKWV*QWRTEVKLAGS
Trigger: AGATCCTGCCAGCTTCACTTCAGTCCGCCACTGCCAGACCCACTTCCAGGCTAAATAGATTACCTGAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CCA 72 bp CATGGAAACGGTGATGCTCATGTTGTTGTATACTCCTaGCTGTGCAGGCGTGGGCTGGTTCTGGACAGCTTG +
Preference number: 6 (lower is better)
Translates to: HGNGDAHVVVYS*LCRRGLVLDSL
Trigger: CAAGCTGTCCAGAACCAGCCCACGCCTGCACAGCCAGGAGTATACAACAACATGAGCATCACCGTTTCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CCA 72 bp GTCCCCAGAACATACTATTTAGCCTGGAAGTGGGTCTaGCAGTGGCGGACTGAAGTGAAGCTGGCAGGATCT +
Preference number: 6 (lower is better)
Translates to: VPRTYYLAWKWV*QWRTEVKLAGS
Trigger: AGATCCTGCCAGCTTCACTTCAGTCCGCCACTGCCAGACCCACTTCCAGGCTAAATAGTATGTTCTGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486198.1
CDS CCA 72 bp GGTGTTGTCCCCAGAACATACTATTTAGCCTGGAAGTaGGTCTGGCAGTGGCGGACTGAAGTGAAGCTGGCA +
Preference number: 6 (lower is better)
Translates to: GVVPRTYYLAWK*VWQWRTEVKLA
Trigger: TGCCAGCTTCACTTCAGTCCGCCACTGCCAGACCCACTTCCAGGCTAAATAGTATGTTCTGGGGACAACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486198.1
CDS CAA 72 bp TTTCCACCTGCCATGGAAACGGTGATGCTCATGTTGTaGTATACTCCTGGCTGTGCAGGCGTGGGCTGGTTC +
Preference number: 6 (lower is better)
Translates to: FPPAMETVMLML*YTPGCAGVGWF
Trigger: GAACCAGCCCACGCCTGCACAGCCAGGAGTATACAACAACATGAGCATCACCGTTTCCATGGCAGGTGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CAA 72 bp GTATTTCCACCTGCCATGGAAACGGTGATGCTCATGTaGTTGTATACTCCTGGCTGTGCAGGCGTGGGCTGG +
Preference number: 6 (lower is better)
Translates to: VFPPAMETVMLM*LYTPGCAGVGW
Trigger: CCAGCCCACGCCTGCACAGCCAGGAGTATACAACAACATGAGCATCACCGTTTCCATGGCAGGTGGAAATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS TCA 72 bp CTATTTAGCCTGGAAGTGGGTCTGGCAGTGGCGGACTaGAGTGAAGCTGGCAGGATCTCCGATTTGATGGTT +
Preference number: 6 (lower is better)
Translates to: LFSLEVGLAVAD*SEAGRISDLMV
Trigger: AACCATCAAATCGGAGATCCTGCCAGCTTCACTTCAGTCCGCCACTGCCAGACCCACTTCCAGGCTAAATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
ENST00000486198.1
CDS TCA 72 bp ATCAACTGCTGTTGTCCCTGTAATCGCTGCTGTAGTTaGAGTCGAAGCTGGTTAGGTGCAGCCGGAGGTCTG +
Preference number: 6 (lower is better)
Translates to: INCCCPCNRCCS*SRSWLGAAGGL
Trigger: CAGACCTCCGGCTGCACCTAACCAGCTTCGACTTCAACTACAGCAGCGATTACAGGGACAACAGCAGTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS GCA 72 bp GTCCTCCTATGTTTCCTGTCATGCCTCTGCTCACCATaGTGTTGCGGTTGGCCAAGGATGCTTCAGGATTTG +
Preference number: 6 (lower is better)
Translates to: VLLCFLSCLCSP*CCGWPRMLQDL
Trigger: CAAATCCTGAAGCATCCTTGGCCAACCGCAACAGCATGGTGAGCAGAGGCATGACAGGAAACATAGGAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS GCA 72 bp TGCCAAACTGTCCTCCTATGTTTCCTGTCATGCCTCTaGTCACCATGCTGTTGCGGTTGGCCAAGGATGCTT +
Preference number: 6 (lower is better)
Translates to: CQTVLLCFLSCL*SPCCCGWPRML
Trigger: AAGCATCCTTGGCCAACCGCAACAGCATGGTGAGCAGAGGCATGACAGGAAACATAGGAGGACAGTTTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS GCA 72 bp AACGGTGATGCTCATGTTGTTGTATACTCCTGGCTGTaGAGGCGTGGGCTGGTTCTGGACAGCTTGACTGAA +
Preference number: 6 (lower is better)
Translates to: NGDAHVVVYSWL*RRGLVLDSLTE
Trigger: TTCAGTCAAGCTGTCCAGAACCAGCCCACGCCTGCACAGCCAGGAGTATACAACAACATGAGCATCACCGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CCA 72 bp CAGGTAATCTATTTAGCCTGGAAGTGGGTCTGGCAGTaGCGGACTGAAGTGAAGCTGGCAGGATCTCCGATT +
Preference number: 6 (lower is better)
Translates to: QVIYLAWKWVWQ*RTEVKLAGSPI
Trigger: AATCGGAGATCCTGCCAGCTTCACTTCAGTCCGCCACTGCCAGACCCACTTCCAGGCTAAATAGATTACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CCA 72 bp CCAATTCCAGCTCAGGTAATCTATTTAGCCTGGAAGTaGGTCTGGCAGTGGCGGACTGAAGTGAAGCTGGCA +
Preference number: 6 (lower is better)
Translates to: PIPAQVIYLAWK*VWQWRTEVKLA
Trigger: TGCCAGCTTCACTTCAGTCCGCCACTGCCAGACCCACTTCCAGGCTAAATAGATTACCTGAGCTGGAATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CCA 72 bp AGAAGCAGGTGGGGTTCCTGGATTTGTACCATAGTTTaGTGGATAGGGGAATTGCTGTGGAGCACCCTGAGG +
Preference number: 6 (lower is better)
Translates to: RSRWGSWICTIV*WIGELLWSTLR
Trigger: CCTCAGGGTGCTCCACAGCAATTCCCCTATCCACCAAACTATGGTACAAATCCAGGAACCCCACCTGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CCA 72 bp TTCCTGTCATGCCTCTGCTCACCATGCTGTTGCGGTTaGCCAAGGATGCTTCAGGATTTGCTGCTAGTTGTG +
Preference number: 6 (lower is better)
Translates to: FLSCLCSPCCCG*PRMLQDLLLVV
Trigger: CACAACTAGCAGCAAATCCTGAAGCATCCTTGGCCAACCGCAACAGCATGGTGAGCAGAGGCATGACAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CAA 72 bp GAGCTCTGCTGGCGGTTTATTCTGGTGGATACCATGTaGCTGTTGGATGGTGGCAATGTGGATGAACGAGCC +
Preference number: 6 (lower is better)
Translates to: ELCWRFILVDTM*LLDGGNVDERA
Trigger: GGCTCGTTCATCCACATTGCCACCATCCAACAGCAACATGGTATCCACCAGAATAAACCGCCAGCAGAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CAA 90 bp ACATTCGTATTTCCACCTGCCATGGAAACGGTGATGCTCATGTTGTaGTATACTCCTGGCTGTGCAGGCGTGGGCTGGTTCTGGACAGCT +
Preference number: 6 (lower is better)
Translates to: TFVFPPAMETVMLML*YTPGCAGVGWFWTA
Trigger: AGCTGTCCAGAACCAGCCCACGCCTGCACAGCCAGGAGTATACAACAACATGAGCATCACCGTTTCCATGGCAGGTGGAAATACGAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS TCA 72 bp GGATACCATGTTGCTGTTGGATGGTGGCAATGTGGATaGACGAGCCACACCATGAGCTGGAGAGATACTAGG +
Preference number: 6 (lower is better)
Translates to: GYHVAVGWWQCG*TSHTMSWRDTR
Trigger: CCTAGTATCTCTCCAGCTCATGGTGTGGCTCGTTCATCCACATTGCCACCATCCAACAGCAACATGGTATCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS TCA 72 bp GCCTGTCCTTGGTTTAAGGCAACATTGGCTACAATCTaGCTTCCGGGTGAGCATCCGAAACTTCCTTGGCTG +
Preference number: 6 (lower is better)
Translates to: ACPWFKATLATI*LPGEHPKLPWL
Trigger: CAGCCAAGGAAGTTTCGGATGCTCACCCGGAAGTCAGATTGTAGCCAATGTTGCCTTAAACCAAGGACAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS TCA 72 bp CAGGGGTGGCTGAGGTGTAATTTGCTGTTGCATGCCTaGTCTCATATTGATGCCAACAGGAGCAGTTGCTGC +
Preference number: 6 (lower is better)
Translates to: QGWLRCNLLLHA*SHIDANRSSCC
Trigger: GCAGCAACTGCTCCTGTTGGCATCAATATGAGATCAGGCATGCAACAGCAAATTACACCTCAGCCACCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS TCA 72 bp ACCAGATTCACTGTACACTGGACGTCAGCAAACACCTaGACCTGTTGCACCTGCTGGGTTCCATCTGCTTCT +
Preference number: 6 (lower is better)
Translates to: TRFTVHWTSANT*TCCTCWVPSAS
Trigger: AGAAGCAGATGGAACCCAGCAGGTGCAACAGGTTCAGGTGTTTGCTGACGTCCAGTGTACAGTGAATCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348332.8
ENST00000406961.5
CDS GCA 72 bp AGCTCTGCTGGCGGTTTATTCTGGTGGATACCATGTTaGTGTTGGATGGTGGCAATGTGGATGAACGAGCCA +
Preference number: 6 (lower is better)
Translates to: SSAGGLFWWIPC*CWMVAMWMNEP
Trigger: TGGCTCGTTCATCCACATTGCCACCATCCAACAGCAACATGGTATCCACCAGAATAAACCGCCAGCAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS GCA 72 bp CTATGTTTCCTGTCATGCCTCTGCTCACCATGCTGTTaGGGTTGGCCAAGGATGCTTCAGGATTTGCTGCTA +
Preference number: 6 (lower is better)
Translates to: LCFLSCLCSPCC*GWPRMLQDLLL
Trigger: TAGCAGCAAATCCTGAAGCATCCTTGGCCAACCGCAACAGCATGGTGAGCAGAGGCATGACAGGAAACATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CCA 72 bp TGGTGGATACCATGTTGCTGTTGGATGGTGGCAATGTaGATGAACGAGCCACACCATGAGCTGGAGAGATAC +
Preference number: 6 (lower is better)
Translates to: WWIPCCCWMVAM*MNEPHHELERY
Trigger: GTATCTCTCCAGCTCATGGTGTGGCTCGTTCATCCACATTGCCACCATCCAACAGCAACATGGTATCCACCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CCA 72 bp GCTGGCGGTTTATTCTGGTGGATACCATGTTGCTGTTaGATGGTGGCAATGTGGATGAACGAGCCACACCAT +
Preference number: 6 (lower is better)
Translates to: AGGLFWWIPCCC*MVAMWMNEPHH
Trigger: ATGGTGTGGCTCGTTCATCCACATTGCCACCATCCAACAGCAACATGGTATCCACCAGAATAAACCGCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CCA 72 bp AGAACATACTATTTAGCCTGGAAGTGGGTCTGGCAGTaGCGGACTGAAGTGAAGCTGGCAGGATCTCCGATT +
Preference number: 6 (lower is better)
Translates to: RTYYLAWKWVWQ*RTEVKLAGSPI
Trigger: AATCGGAGATCCTGCCAGCTTCACTTCAGTCCGCCACTGCCAGACCCACTTCCAGGCTAAATAGTATGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486198.1
CDS CAA 72 bp GCAGGGTCGGATGAACTGTCCCCGAGGCCACTCATGTaGAAAAACTTCACACCTGGGAGACTTCTTTGTTCA +
Preference number: 6 (lower is better)
Translates to: AGSDELSPRPLM*KNFTPGRLLCS
Trigger: TGAACAAAGAAGTCTCCCAGGTGTGAAGTTTTTCAACATGAGTGGCCTCGGGGACAGTTCATCCGACCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
ENST00000483904.5
CDS CAA 72 bp TGCTGGCGGTTTATTCTGGTGGATACCATGTTGCTGTaGGATGGTGGCAATGTGGATGAACGAGCCACACCA +
Preference number: 6 (lower is better)
Translates to: CWRFILVDTMLL*DGGNVDERATP
Trigger: TGGTGTGGCTCGTTCATCCACATTGCCACCATCCAACAGCAACATGGTATCCACCAGAATAAACCGCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CAA 90 bp AACTGTCCTCCTATGTTTCCTGTCATGCCTCTGCTCACCATGCTGTaGCGGTTGGCCAAGGATGCTTCAGGATTTGCTGCTAGTTGTGAA +
Preference number: 6 (lower is better)
Translates to: NCPPMFPVMPLLTML*RLAKDASGFAASCE
Trigger: TTCACAACTAGCAGCAAATCCTGAAGCATCCTTGGCCAACCGCAACAGCATGGTGAGCAGAGGCATGACAGGAAACATAGGAGGACAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS TCA 72 bp TTGGATGGTGGCAATGTGGATGAACGAGCCACACCATaGGCTGGAGAGATACTAGGATTGACCGAGGGATTT +
Preference number: 6 (lower is better)
Translates to: LDGGNVDERATP*AGEILGLTEGF
Trigger: AAATCCCTCGGTCAATCCTAGTATCTCTCCAGCTCATGGTGTGGCTCGTTCATCCACATTGCCACCATCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CCA 72 bp TATGAAGGTCTGAGCTCTGCTGGCGGTTTATTCTGGTaGATACCATGTTGCTGTTGGATGGTGGCAATGTGG +
Preference number: 6 (lower is better)
Translates to: YEGLSSAGGLFW*IPCCCWMVAMW
Trigger: CCACATTGCCACCATCCAACAGCAACATGGTATCCACCAGAATAAACCGCCAGCAGAGCTCAGACCTTCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CCA 72 bp TGCTATGAAGGTCTGAGCTCTGCTGGCGGTTTATTCTaGTGGATACCATGTTGCTGTTGGATGGTGGCAATG +
Preference number: 6 (lower is better)
Translates to: CYEGLSSAGGLF*WIPCCCWMVAM
Trigger: CATTGCCACCATCCAACAGCAACATGGTATCCACCAGAATAAACCGCCAGCAGAGCTCAGACCTTCATAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CCA 72 bp TCTGTGAACTGGCCTGTCCTTGGTTTAAGGCAACATTaGCTACAATCTGACTTCCGGGTGAGCATCCGAAAC +
Preference number: 6 (lower is better)
Translates to: SVNWPVLGLRQH*LQSDFRVSIRN
Trigger: GTTTCGGATGCTCACCCGGAAGTCAGATTGTAGCCAATGTTGCCTTAAACCAAGGACAGGCCAGTTCACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CAA 72 bp GAAACACTGCATTACTTCATAACGCTGGCAAGCTTCTaGGTTCTCGGTCCCTGGCTCATCTGGAGGGTGAAT +
Preference number: 6 (lower is better)
Translates to: ETLHYFITLASF*VLGPWLIWRVN
Trigger: ATTCACCCTCCAGATGAGCCAGGGACCGAGAACCAAGAAGCTTGCCAGCGTTATGAAGTAATGCAGTGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CAA 72 bp TGGAAGTGCCTGTGCAAGACAGGACATCTTTGCAGCTaGTGTCTATATCAGCATGCCGTAACTGCTGTTCGG +
Preference number: 6 (lower is better)
Translates to: WKCLCKTGHLCS*CLYQHAVTAVR
Trigger: CCGAACAGCAGTTACGGCATGCTGATATAGACACAAGCTGCAAAGATGTCCTGTCTTGCACAGGCACTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CAA 72 bp TTGACTGTACAGTTCCCGCTGACGTTGTGCCAACATTaGAGCATTCAGGGGTGGCTGAGGTGTAATTTGCTG +
Preference number: 6 (lower is better)
Translates to: LTVQFPLTLCQH*SIQGWLRCNLL
Trigger: CAGCAAATTACACCTCAGCCACCCCTGAATGCTCAAATGTTGGCACAACGTCAGCGGGAACTGTACAGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS TCA 72 bp GCTTCTTGGTTCTCGGTCCCTGGCTCATCTGGAGGGTaGATTAGCATCCTGCAGTTAAAGGTATGGCTATTT +
Preference number: 6 (lower is better)
Translates to: ASWFSVPGSSGG*ISILQLKVWLF
Trigger: AAATAGCCATACCTTTAACTGCAGGATGCTAATTCACCCTCCAGATGAGCCAGGGACCGAGAACCAAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS TCA 72 bp CTCATCTGCATCTGGGCCATCATTGGGTTCATGTTCTaGACATTCGTATTTCCACCTGCCATGGAAACGGTG +
Preference number: 6 (lower is better)
Translates to: LICIWAIIGFMF*TFVFPPAMETV
Trigger: CACCGTTTCCATGGCAGGTGGAAATACGAATGTTCAGAACATGAACCCAATGATGGCCCAGATGCAGATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS GCA 72 bp AGGAGGAAAGGAATTGTTTGGCATCCTGGGCCTTGTTaGCAATCCAGAAGTAACCTGTCTCCTTGGAGACAT +
Preference number: 6 (lower is better)
Translates to: RRKGIVWHPGPC*QSRSNLSPWRH
Trigger: ATGTCTCCAAGGAGACAGGTTACTTCTGGATTGGCAACAAGGCCCAGGATGCCAAACAATTCCTTTCCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CAA 72 bp CTCTGGGCCTCCAGTTTTATTTCCTCAGGAGTGGGTTaGGTCATTGGGGTTGGGTTTGTATTACATGGATCC +
Preference number: 6 (lower is better)
Translates to: LWASSFISSGVG*VIGVGFVLHGS
Trigger: GGATCCATGTAATACAAACCCAACCCCAATGACCAAACCCACTCCTGAGGAAATAAAACTGGAGGCCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
ENST00000486198.1
CDS CAA 90 bp ATCTGCCTGAGGACTGGAGAACTGGCAGAGAAGCCAACGGAGTTATaGGGTCCTTCATTCATACCCTGTAAAGATGTTACTGGGATGTTT +
Preference number: 6 (lower is better)
Translates to: ICLRTGELAEKPTEL*GPSFIPCKDVTGMF
Trigger: AAACATCCCAGTAACATCTTTACAGGGTATGAATGAAGGACCCAATAACTCCGTTGGCTTCTCTGCCAGTTCTCCAGTCCTCAGGCAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CAA 90 bp GTAAACTGGCTCTGGGCCTCCAGTTTTATTTCCTCAGGAGTGGGTTaGGTCATTGGGGTTGGGTTTGTATTACATGGATCCATCTGTTCT +
Preference number: 6 (lower is better)
Translates to: VNWLWASSFISSGVG*VIGVGFVLHGSICS
Trigger: AGAACAGATGGATCCATGTAATACAAACCCAACCCCAATGACCAAACCCACTCCTGAGGAAATAAAACTGGAGGCCCAGAGCCAGTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
ENST00000486198.1
CDS CAA 90 bp TCATTCCTGGCATCTGCAAAGAGCTCATCTGCATCTGGGCCATCATaGGGTTCATGTTCTGAACATTCGTATTTCCACCTGCCATGGAAA +
Preference number: 6 (lower is better)
Translates to: SFLASAKSSSASGPS*GSCSEHSYFHLPWK
Trigger: TTTCCATGGCAGGTGGAAATACGAATGTTCAGAACATGAACCCAATGATGGCCCAGATGCAGATGAGCTCTTTGCAGATGCCAGGAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS TCA 72 bp ACTCGGGGAATTGACATTCCAGAATTAGTGTCATCTTaGGGAGAAAGCCCACTGTGCTCCCTGTCGATGATA +
Preference number: 6 (lower is better)
Translates to: TRGIDIPELVSS*GESPLCSLSMI
Trigger: TATCATCGACAGGGAGCACAGTGGGCTTTCTCCTCAAGATGACACTAATTCTGGAATGTCAATTCCCCGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS GCA 72 bp GACAGGACATCTTTGCAGCTTGTGTCTATATCAGCATaGCGTAACTGCTGTTCGGCAGTTGTTGTCAAAAGC +
Preference number: 6 (lower is better)
Translates to: DRTSLQLVSISA*RNCCSAVVVKS
Trigger: GCTTTTGACAACAACTGCCGAACAGCAGTTACGGCATGCTGATATAGACACAAGCTGCAAAGATGTCCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CCA 72 bp GGACTGGAGAACTGGCAGAGAAGCCAACGGAGTTATTaGGTCCTTCATTCATACCCTGTAAAGATGTTACTG +
Preference number: 6 (lower is better)
Translates to: GLENWQRSQRSY*VLHSYPVKMLL
Trigger: CAGTAACATCTTTACAGGGTATGAATGAAGGACCCAATAACTCCGTTGGCTTCTCTGCCAGTTCTCCAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CCA 72 bp TCTGGGCCTCCAGTTTTATTTCCTCAGGAGTGGGTTTaGTCATTGGGGTTGGGTTTGTATTACATGGATCCA +
Preference number: 6 (lower is better)
Translates to: SGPPVLFPQEWV*SLGLGLYYMDP
Trigger: TGGATCCATGTAATACAAACCCAACCCCAATGACCAAACCCACTCCTGAGGAAATAAAACTGGAGGCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
ENST00000486198.1
CDS CCA 72 bp CATCTGCAAAGAGCTCATCTGCATCTGGGCCATCATTaGGTTCATGTTCTGAACATTCGTATTTCCACCTGC +
Preference number: 6 (lower is better)
Translates to: HLQRAHLHLGHH*VHVLNIRISTC
Trigger: GCAGGTGGAAATACGAATGTTCAGAACATGAACCCAATGATGGCCCAGATGCAGATGAGCTCTTTGCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CAA 90 bp ATGCCAACGGGAGAGCTTAATGTCGAAATATTAGGAGGAAAGGAATaGTTTGGCATCCTGGGCCTTGTTGCCAATCCAGAAGTAACCTGT +
Preference number: 6 (lower is better)
Translates to: MPTGELNVEILGGKE*FGILGLVANPEVTC
Trigger: ACAGGTTACTTCTGGATTGGCAACAAGGCCCAGGATGCCAAACAATTCCTTTCCTCCTAATATTTCGACATTAAGCTCTCCCGTTGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CAA 90 bp GGCTCTGGGCCTCCAGTTTTATTTCCTCAGGAGTGGGTTTGGTCATaGGGGTTGGGTTTGTATTACATGGATCCATCTGTTCTTTCTTTT +
Preference number: 6 (lower is better)
Translates to: GSGPPVLFPQEWVWS*GLGLYYMDPSVLSF
Trigger: AAAAGAAAGAACAGATGGATCCATGTAATACAAACCCAACCCCAATGACCAAACCCACTCCTGAGGAAATAAAACTGGAGGCCCAGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
ENST00000486198.1
CDS CAA 90 bp TCAATTCCCAGAGCTCTGTCTAGTTCAGCTAGCTCAGTTTCATCTTaGCCACTAAGGAAGGATACCAGCTGTTCAAGAAGAGCCTTCTCA +
Preference number: 6 (lower is better)
Translates to: SIPRALSSSASSVSS*PLRKDTSCSRRAFS
Trigger: TGAGAAGGCTCTTCTTGAACAGCTGGTATCCTTCCTTAGTGGCAAAGATGAAACTGAGCTAGCTGAACTAGACAGAGCTCTGGGAATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS TCA 72 bp GTTGCTAGAATTACTATGACTGCTGCTATGAAGGTCTaGGCTCTGCTGGCGGTTTATTCTGGTGGATACCAT +
Preference number: 6 (lower is better)
Translates to: VARITMTAAMKV*ALLAVYSGGYH
Trigger: ATGGTATCCACCAGAATAAACCGCCAGCAGAGCTCAGACCTTCATAGCAGCAGTCATAGTAATTCTAGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS TCA 72 bp AGTAAGGCTGGGAATAAAGGTTGGGTCTTTCTTCCATaGTCAAAGGTGGCGTTGCTTGTTGTGGTGGAAATC +
Preference number: 6 (lower is better)
Translates to: SKAGNKGWVFLP*SKVALLVVVEI
Trigger: GATTTCCACCACAACAAGCAACGCCACCTTTGATCATGGAAGAAAGACCCAACCTTTATTCCCAGCCTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS TCA 72 bp TCTGCCAAAAATAGACTAAGAGGAGTGTTCCTACCTTaGTGCCAGTGTGTCACATGGCGATCCTTTCCTCTT +
Preference number: 6 (lower is better)
Translates to: SAKNRLRGVFLP*CQCVTWRSFPL
Trigger: AAGAGGAAAGGATCGCCATGTGACACACTGGCATCAAGGTAGGAACACTCCTCTTAGTCTATTTTTGGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483904.5
CDS GCA 72 bp TCTTTGCAGCTTGTGTCTATATCAGCATGCCGTAACTaGTGTTCGGCAGTTGTTGTCAAAAGCTGCACTAGT +
Preference number: 6 (lower is better)
Translates to: SLQLVSISACRN*CSAVVVKSCTS
Trigger: ACTAGTGCAGCTTTTGACAACAACTGCCGAACAGCAGTTACGGCATGCTGATATAGACACAAGCTGCAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS GCA 72 bp ACAGGAGCAGTTGCTGCAAACTGGTTTAAGATAGCTTaGCGATTTTGGTGTATCAACTGCTGTTGTCCCTGT +
Preference number: 6 (lower is better)
Translates to: TGAVAANWFKIA*RFWCINCCCPC
Trigger: ACAGGGACAACAGCAGTTGATACACCAAAATCGGCAAGCTATCTTAAACCAGTTTGCAGCAACTGCTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CAA 72 bp ATGAATTCCCATGATGAAAGGTTGCATGTCTGGACTTaGAGGGTAGCAAAGTTTACACTTGGTGTGGGCGCT +
Preference number: 6 (lower is better)
Translates to: MNSHDERLHVWT*RVAKFTLGVGA
Trigger: AGCGCCCACACCAAGTGTAAACTTTGCTACCCTCAAAGTCCAGACATGCAACCTTTCATCATGGGAATTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CAA 72 bp AGGACTGGAGAACTGGCAGAGAAGCCAACGGAGTTATaGGGTCCTTCATTCATACCCTGTAAAGATGTTACT +
Preference number: 6 (lower is better)
Translates to: RTGELAEKPTEL*GPSFIPCKDVT
Trigger: AGTAACATCTTTACAGGGTATGAATGAAGGACCCAATAACTCCGTTGGCTTCTCTGCCAGTTCTCCAGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CAA 72 bp CTATATCAGCATGCCGTAACTGCTGTTCGGCAGTTGTaGTCAAAAGCTGCACTAGTTTGTGACTGGTTTGAG +
Preference number: 6 (lower is better)
Translates to: LYQHAVTAVRQL*SKAALVCDWFE
Trigger: CTCAAACCAGTCACAAACTAGTGCAGCTTTTGACAACAACTGCCGAACAGCAGTTACGGCATGCTGATATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CAA 90 bp GTCGATGATATGAATTCCCATGATGAAAGGTTGCATGTCTGGACTTaGAGGGTAGCAAAGTTTACACTTGGTGTGGGCGCTAAGCATTGT +
Preference number: 6 (lower is better)
Translates to: VDDMNSHDERLHVWT*RVAKFTLGVGAKHC
Trigger: ACAATGCTTAGCGCCCACACCAAGTGTAAACTTTGCTACCCTCAAAGTCCAGACATGCAACCTTTCATCATGGGAATTCATATCATCGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CAA 90 bp TGCAGCTTGTGTCTATATCAGCATGCCGTAACTGCTGTTCGGCAGTaGTTGTCAAAAGCTGCACTAGTTTGTGACTGGTTTGAGAGTATT +
Preference number: 6 (lower is better)
Translates to: CSLCLYQHAVTAVRQ*LSKAALVCDWFESI
Trigger: AATACTCTCAAACCAGTCACAAACTAGTGCAGCTTTTGACAACAACTGCCGAACAGCAGTTACGGCATGCTGATATAGACACAAGCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS TCA 72 bp CGGTGTAGAATTTTATGCCGTTCTGTCAATGAGCTATaGGAAGAGGGACAAGAACCTCCTGAAGAGTTAGCA +
Preference number: 6 (lower is better)
Translates to: RCRILCRSVNEL*EEGQEPPEELA
Trigger: TGCTAACTCTTCAGGAGGTTCTTGTCCCTCTTCTCATAGCTCATTGACAGAACGGCATAAAATTCTACACCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS GCA 72 bp TCTTCACAAATTCTGCATGATCCCCCACGTGCAGTATaGTGTAGACGCTCGTATTCATTAATTCCTCCTGAT +
Preference number: 6 (lower is better)
Translates to: SSQILHDPPRAV*CRRSYSLIPPD
Trigger: ATCAGGAGGAATTAATGAATACGAGCGTCTACAGCATACTGCACGTGGGGGATCATGCAGAATTTGTGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS GCA 72 bp TTTTCTATCGTAATTTCCTCCTTTCCTATCCACGATTaGCGTATCTCCTGTCCTCTTTTCCTCTCCGAAGTC +
Preference number: 6 (lower is better)
Translates to: FSIVISSFPIHD*RISCPLFLSEV
Trigger: GACTTCGGAGAGGAAAAGAGGACAGGAGATACGGCAATCGTGGATAGGAAAGGAGGAAATTACGATAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405141.5
ENST00000469850.5
CDS CCA 72 bp TCATCAGAGTCAGTTCCAGTTACATTTCCATTAGTATaGATAGATCTCAGCATCCAACTGCCCAAAGGGGTG +
Preference number: 6 (lower is better)
Translates to: SSESVPVTFPLV*IDLSIQLPKGV
Trigger: CACCCCTTTGGGCAGTTGGATGCTGAGATCTATCCATACTAATGGAAATGTAACTGGAACTGACTCTGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405141.5
CDS CAA 72 bp GGAGAGCTTAATGTCGAAATATTAGGAGGAAAGGAATaGTTTGGCATCCTGGGCCTTGTTGCCAATCCAGAA +
Preference number: 6 (lower is better)
Translates to: GELNVEILGGKE*FGILGLVANPE
Trigger: TTCTGGATTGGCAACAAGGCCCAGGATGCCAAACAATTCCTTTCCTCCTAATATTTCGACATTAAGCTCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CAA 72 bp TGTCTATATCAGCATGCCGTAACTGCTGTTCGGCAGTaGTTGTCAAAAGCTGCACTAGTTTGTGACTGGTTT +
Preference number: 6 (lower is better)
Translates to: CLYQHAVTAVRQ*LSKAALVCDWF
Trigger: AAACCAGTCACAAACTAGTGCAGCTTTTGACAACAACTGCCGAACAGCAGTTACGGCATGCTGATATAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CAA 72 bp CCTCCAGTTTTATTTCCTCAGGAGTGGGTTTGGTCATaGGGGTTGGGTTTGTATTACATGGATCCATCTGTT +
Preference number: 6 (lower is better)
Translates to: PPVLFPQEWVWS*GLGLYYMDPSV
Trigger: AACAGATGGATCCATGTAATACAAACCCAACCCCAATGACCAAACCCACTCCTGAGGAAATAAAACTGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
ENST00000486198.1
CDS CAA 72 bp AGAGCTCTGTCTAGTTCAGCTAGCTCAGTTTCATCTTaGCCACTAAGGAAGGATACCAGCTGTTCAAGAAGA +
Preference number: 6 (lower is better)
Translates to: RALSSSASSVSS*PLRKDTSCSRR
Trigger: TCTTCTTGAACAGCTGGTATCCTTCCTTAGTGGCAAAGATGAAACTGAGCTAGCTGAACTAGACAGAGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CAA 72 bp CTTTTCTATCGTAATTTCCTCCTTTCCTATCCACGATaGCCGTATCTCCTGTCCTCTTTTCCTCTCCGAAGT +
Preference number: 6 (lower is better)
Translates to: LFYRNFLLSYPR*PYLLSSFPLRS
Trigger: ACTTCGGAGAGGAAAAGAGGACAGGAGATACGGCAATCGTGGATAGGAAAGGAGGAAATTACGATAGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405141.5
ENST00000469850.5
CDS CAA 90 bp ATGAACTGTGCTAGGGATATTCCTGTACCTTCCATAGGAGAATTATaGAGGTTTAAAGAGGGATTACTGCTCTGTGAACTGGCCTGTCCT +
Preference number: 6 (lower is better)
Translates to: MNCARDIPVPSIGEL*RFKEGLLLCELACP
Trigger: AGGACAGGCCAGTTCACAGAGCAGTAATCCCTCTTTAAACCTCAATAATTCTCCTATGGAAGGTACAGGAATATCCCTAGCACAGTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CAA 90 bp AGCTTGTGTCTATATCAGCATGCCGTAACTGCTGTTCGGCAGTTGTaGTCAAAAGCTGCACTAGTTTGTGACTGGTTTGAGAGTATTTAC +
Preference number: 6 (lower is better)
Translates to: SLCLYQHAVTAVRQL*SKAALVCDWFESIY
Trigger: GTAAATACTCTCAAACCAGTCACAAACTAGTGCAGCTTTTGACAACAACTGCCGAACAGCAGTTACGGCATGCTGATATAGACACAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS TCA 72 bp CAGTTAAAGGTATGGCTATTTCGTCGTGTTGCCTCTTaGGGCCAAGGAACTCCATTTACTAGTGATTTTGGT +
Preference number: 6 (lower is better)
Translates to: QLKVWLFRRVAS*GQGTPFTSDFG
Trigger: ACCAAAATCACTAGTAAATGGAGTTCCTTGGCCTCAAGAGGCAACACGACGAAATAGCCATACCTTTAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS TCA 72 bp CTCCATCCTCTTGAATTGATTTTGGCTGTGACACAGTaGAACACTGCATTACTTCATAACGCTGGCAAGCTT +
Preference number: 6 (lower is better)
Translates to: LHPLELILAVTQ*NTALLHNAGKL
Trigger: AAGCTTGCCAGCGTTATGAAGTAATGCAGTGTTTCACTGTGTCACAGCCAAAATCAATTCAAGAGGATGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS TCA 72 bp GATACTAGGATTGACCGAGGGATTTACTCGGGGAATTaGCATTCCAGAATTAGTGTCATCTTGAGGAGAAAG +
Preference number: 6 (lower is better)
Translates to: DTRIDRGIYSGN*HSRISVILRRK
Trigger: CTTTCTCCTCAAGATGACACTAATTCTGGAATGTCAATTCCCCGAGTAAATCCCTCGGTCAATCCTAGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS GCA 72 bp CATTGGGTTCATGTTCTGAACATTCGTATTTCCACCTaGCATGGAAACGGTGATGCTCATGTTGTTGTATAC +
Preference number: 6 (lower is better)
Translates to: HWVHVLNIRIST*HGNGDAHVVVY
Trigger: GTATACAACAACATGAGCATCACCGTTTCCATGGCAGGTGGAAATACGAATGTTCAGAACATGAACCCAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CCA 72 bp CTCATATTGATGCCAACAGGAGCAGTTGCTGCAAACTaGTTTAAGATAGCTTGCCGATTTTGGTGTATCAAC +
Preference number: 6 (lower is better)
Translates to: LILMPTGAVAAN*FKIACRFWCIN
Trigger: GTTGATACACCAAAATCGGCAAGCTATCTTAAACCAGTTTGCAGCAACTGCTCCTGTTGGCATCAATATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS TCA 72 bp GATATCTGGAAACAATCTGACCCAATACTGTATTTCTaGAAGTCCTGTTATGGGGTGTTTTGGGTGAGACGA +
Preference number: 6 (lower is better)
Translates to: DIWKQSDPILYF*KSCYGVFWVRR
Trigger: TCGTCTCACCCAAAACACCCCATAACAGGACTTTCAGAAATACAGTATTGGGTCAGATTGTTTCCAGATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486198.1
CDS CAA 72 bp GTCCCAAGGATTCCTTTTCTATCACTCCTTGACTACTaGATGAGATGTCTGATTTCTGTACATCGTCATCAG +
Preference number: 6 (lower is better)
Translates to: VPRIPFLSLLDY*MRCLISVHRHQ
Trigger: CTGATGACGATGTACAGAAATCAGACATCTCATCAAGTAGTCAAGGAGTGATAGAAAAGGAATCCTTGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CAA 72 bp GCTAGGGATATTCCTGTACCTTCCATAGGAGAATTATaGAGGTTTAAAGAGGGATTACTGCTCTGTGAACTG +
Preference number: 6 (lower is better)
Translates to: ARDIPVPSIGEL*RFKEGLLLCEL
Trigger: CAGTTCACAGAGCAGTAATCCCTCTTTAAACCTCAATAATTCTCCTATGGAAGGTACAGGAATATCCCTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CAA 72 bp TTGATGAGATGTCTGATTTCTGTACATCGTCATCAGTaGTTGATTTCTCTTGATGCCAGTGTGTCACATGGC +
Preference number: 6 (lower is better)
Translates to: LMRCLISVHRHQ*LISLDASVSHG
Trigger: GCCATGTGACACACTGGCATCAAGAGAAATCAACAACTGATGACGATGTACAGAAATCAGACATCTCATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407230.5
CDS TCA 72 bp TTTTGGAAGCAAAGTTGCCTACTGCATGATCTTGCTTaGTGGTCCTTGATTTTATCATCAGAGTCAGTTCCA +
Preference number: 6 (lower is better)
Translates to: FWKQSCLLHDLA*WSLILSSESVP
Trigger: TGGAACTGACTCTGATGATAAAATCAAGGACCATCAAGCAAGATCATGCAGTAGGCAACTTTGCTTCCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348332.8
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
ENST00000469850.5
ENST00000496333.5
CDS CCA 72 bp TTTTATTTCCTCAGGAGTGGGTTTGGTCATTGGGGTTaGGTTTGTATTACATGGATCCATCTGTTCTTTCTT +
Preference number: 6 (lower is better)
Translates to: FYFLRSGFGHWG*VCITWIHLFFL
Trigger: AAGAAAGAACAGATGGATCCATGTAATACAAACCCAACCCCAATGACCAAACCCACTCCTGAGGAAATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
ENST00000486198.1
CDS CCA 72 bp ACTCTGATTTATAGCTGTCACTGTATTATTTGTCCATaGAATCTGATCGCCTGTTCCTGGTTGTCCAAATTG +
Preference number: 6 (lower is better)
Translates to: TLIYSCHCIICP*NLIACSWLSKL
Trigger: CAATTTGGACAACCAGGAACAGGCGATCAGATTCCATGGACAAATAATACAGTGACAGCTATAAATCAGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CCA 72 bp TCATCAGAGTCAGTTCCAGTTACATTTCCATTAGTATaGATAGATCTGTGTAACAAACCTGCAGATCTGGCA +
Preference number: 6 (lower is better)
Translates to: SSESVPVTFPLV*IDLCNKPADLA
Trigger: TGCCAGATCTGCAGGTTTGTTACACAGATCTATCCATACTAATGGAAATGTAACTGGAACTGACTCTGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469850.5
CDS CAA 72 bp ATTATTTGTCCATGGAATCTGATCGCCTGTTCCTGGTaGTCCAAATTGGTTATCAATTGCTTCCAATTCCAG +
Preference number: 6 (lower is better)
Translates to: IICPWNLIACSW*SKLVINCFQFQ
Trigger: CTGGAATTGGAAGCAATTGATAACCAATTTGGACAACCAGGAACAGGCGATCAGATTCCATGGACAAATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CAA 90 bp AAAGAAGAGGTCCCAAGGATTCCTTTTCTATCACTCCTTGACTACTaGATGAGATGTCTGATTTCTGTACATCGTCATCAGTTGTTGATT +
Preference number: 6 (lower is better)
Translates to: KEEVPRIPFLSLLDY*MRCLISVHRHQLLI
Trigger: AATCAACAACTGATGACGATGTACAGAAATCAGACATCTCATCAAGTAGTCAAGGAGTGATAGAAAAGGAATCCTTGGGACCTCTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS TCA 72 bp TTTATAGCTGTCACTGTATTATTTGTCCATGGAATCTaGTCGCCTGTTCCTGGTTGTCCAAATTGGTTATCA +
Preference number: 6 (lower is better)
Translates to: FIAVTVLFVHGI*SPVPGCPNWLS
Trigger: TGATAACCAATTTGGACAACCAGGAACAGGCGATCAGATTCCATGGACAAATAATACAGTGACAGCTATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS TCA 72 bp AAAGTTGCCTACTGCATGATCTTGCTTGATGGTCCTTaGTTTTATCATCAGAGTCAGTTCCAGTTACATTTC +
Preference number: 6 (lower is better)
Translates to: KVAYCMILLDGP*FYHQSQFQLHF
Trigger: GAAATGTAACTGGAACTGACTCTGATGATAAAATCAAGGACCATCAAGCAAGATCATGCAGTAGGCAACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348332.8
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
ENST00000469850.5
ENST00000496333.5
CDS CCA 72 bp TGTATTATTTGTCCATGGAATCTGATCGCCTGTTCCTaGTTGTCCAAATTGGTTATCAATTGCTTCCAATTC +
Preference number: 6 (lower is better)
Translates to: CIICPWNLIACS*LSKLVINCFQF
Trigger: GAATTGGAAGCAATTGATAACCAATTTGGACAACCAGGAACAGGCGATCAGATTCCATGGACAAATAATACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS TCA 72 bp TGGATCATGGCTATAAAAACATCTGAGACAGATACATaGATGGAGGAACTTGATCTAACAGTTATGGAAGGA +
Preference number: 6 (lower is better)
Translates to: WIMAIKTSETDT*MEELDLTVMEG
Trigger: TCCTTCCATAACTGTTAGATCAAGTTCCTCCATTCATGTATCTGTCTCAGATGTTTTTATAGCCATGATCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483904.5
CDS CAA 72 bp TCTGGTTTTACACTCAAGCTGTCAATGTCACTAATGTaGGCAGACAGTAACTCAGCTAGTTCTTCTAAATAT +
Preference number: 6 (lower is better)
Translates to: SGFTLKLSMSLM*ADSNSASSSKY
Trigger: ATATTTAGAAGAACTAGCTGAGTTACTGTCTGCCAACATTAGTGACATTGACAGCTTGAGTGTAAAACCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
CDS CAA 72 bp AATACTGTATTTCTGAAAGTCCTGTTATGGGGTGTTTaGGGTGAGACGACAAAATTGTTCTCCTTAACATCA +
Preference number: 6 (lower is better)
Translates to: NTVFLKVLLWGV*GETTKLFSLTS
Trigger: TGATGTTAAGGAGAACAATTTTGTCGTCTCACCCAAAACACCCCATAACAGGACTTTCAGAAATACAGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486198.1
CDS CAA 72 bp AAAATCAAAATTGGAATGGTCACGCCTCCTATAGGGTaGCCATCAATACTGAAAGTGAGTATCATTGCTAAT +
Preference number: 6 (lower is better)
Translates to: KIKIGMVTPPIG*PSILKVSIIAN
Trigger: ATTAGCAATGATACTCACTTTCAGTATTGATGGCAACCCTATAGGAGGCGTGACCATTCCAATTTTGATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493773.1
CDS CAA 72 bp TTTCCACTTTCACCTTTACATCATCCAGGCTCAGGTTaGGAGTTGATCTTAAATCTTTCTCATCTTTATCTA +
Preference number: 6 (lower is better)
Translates to: FPLSPLHHPGSG*ELILNLSHLYL
Trigger: TAGATAAAGATGAGAAAGATTTAAGATCAACTCCAAACCTGAGCCTGGATGATGTAAAGGTGAAAGTGGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
ENST00000486198.1
CDS TCA 72 bp AATTGTGAGCTAATACACTGGTCTTCTGATTTACTCTaGTTTATAGCTGTCACTGTATTATTTGTCCATGGA +
Preference number: 6 (lower is better)
Translates to: NCELIHWSSDLL*FIAVTVLFVHG
Trigger: TCCATGGACAAATAATACAGTGACAGCTATAAATCAGAGTAAATCAGAAGACCAGTGTATTAGCTCACAATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5
CDS CCA 72 bp TATTCATTAATTCCTCCTGATTGTAACCTAAGTAGCTaGTTACATTCTCTGACACAAATACAATTCTCCCTT +
Preference number: 6 (lower is better)
Translates to: YSLIPPDCNLSS*LHSLTQIQFSL
Trigger: AAGGGAGAATTGTATTTGTGTCAGAGAATGTAACCAGCTACTTAGGTTACAATCAGGAGGAATTAATGAATA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288599.9
ENST00000348332.8
ENST00000395856.3
ENST00000405141.5
ENST00000406961.5
ENST00000407230.5