RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NCKIPSD (Homo sapiens)

Ensembl gene IDs: ENSG00000213672

Ensembl transcript IDs: ENST00000294129.7, ENST00000413374.1, ENST00000415281.1, ENST00000416649.6, ENST00000426678.1, ENST00000439518.5, ENST00000453349.5, ENST00000454134.1, ENST00000470006.1

Found 510 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGTGGGTGCCTCGGCGGGGCACAGGTGGGGGTGTGGGTGAGCAGCTaGAGCCTGGTTCAGATGGGCTGGAGCTGGTATAGAGCGTGTCCA +
Preference number: 1 (lower is better)
Translates to: CGCLGGAQVGVWVSS*SLVQMGWSWYRACP
Trigger: TGGACACGCTCTATACCAGCTCCAGCCCATCTGAACCAGGCTCCAGCTGCTCACCCACACCCCCACCTGTGCCCCGCCGAGGCACCCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454134.1
3UTR GCA 90 bp AGGCCTCCATCTGCCCCAAGATGCTCAGAACTGGGTAGGCTGTGCTaGCGCTCGAACCCAGCTCGACACACCCCATTGGGCTGCCTGGCT +
Preference number: 1 (lower is better)
Translates to: RPPSAPRCSELGRLC*RSNPARHTPLGCLA
Trigger: AGCCAGGCAGCCCAATGGGGTGTGTCGAGCTGGGTTCGAGCGGCAGCACAGCCTACCCAGTTCTGAGCATCTTGGGGCAGATGGAGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454134.1
3UTR TCA 90 bp TGGGCTGGAGCTGGTATAGAGCGTGTCCAGGGAGGTGCTGCTGACTaGGGAGCCGCTGGACACAGAGTTACCCCCGGAGGGCATGGTGTT +
Preference number: 1 (lower is better)
Translates to: WAGAGIERVQGGAAD*GAAGHRVTPGGHGV
Trigger: AACACCATGCCCTCCGGGGGTAACTCTGTGTCCAGCGGCTCCTCAGTCAGCAGCACCTCCCTGGACACGCTCTATACCAGCTCCAGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454134.1
3UTR GCA 90 bp AGGCTGTGCTGCCGCTCGAACCCAGCTCGACACACCCCATTGGGCTaGCTGGCTGCAGCAGCATCCAAGTGGTGGTCACTGGTTGATGAG +
Preference number: 1 (lower is better)
Translates to: RLCCRSNPARHTPLG*LAAAASKWWSLVDE
Trigger: CTCATCAACCAGTGACCACCACTTGGATGCTGCTGCAGCCAGGCAGCCCAATGGGGTGTGTCGAGCTGGGTTCGAGCGGCAGCACAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454134.1
3UTR CCA 90 bp TGTACTTGCCACCATCCCGCATGGCTGTGTTGTGTACAGCCTCGATaGCCCGGTCAATGGCCTGGAGGACATCCTGCTCCAGGCCCTGGG +
Preference number: 1 (lower is better)
Translates to: CTCHHPAWLCCVQPR*PGQWPGGHPAPGPG
Trigger: CCCAGGGCCTGGAGCAGGATGTCCTCCAGGCCATTGACCGGGCCATCGAGGCTGTACACAACACAGCCATGCGGGATGGTGGCAAGTACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454134.1
3UTR CCA 90 bp GGATGGATGGCCTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTaGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCAT +
Preference number: 1 (lower is better)
Translates to: GWMACLQDPAFKAAA*PRPLGVGVKGSDPH
Trigger: ATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAGGCCATCCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
3UTR CCA 90 bp TGTGCTGCCGCTCGAACCCAGCTCGACACACCCCATTGGGCTGCCTaGCTGCAGCAGCATCCAAGTGGTGGTCACTGGTTGATGAGGTCA +
Preference number: 1 (lower is better)
Translates to: CAAARTQLDTPHWAA*LQQHPSGGHWLMRS
Trigger: TGACCTCATCAACCAGTGACCACCACTTGGATGCTGCTGCAGCCAGGCAGCCCAATGGGGTGTGTCGAGCTGGGTTCGAGCGGCAGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454134.1
3UTR CCA 90 bp GTGGGATCTGGTAGAGGCCTCCATCTGCCCCAAGATGCTCAGAACTaGGTAGGCTGTGCTGCCGCTCGAACCCAGCTCGACACACCCCAT +
Preference number: 1 (lower is better)
Translates to: VGSGRGLHLPQDAQN*VGCAAARTQLDTPH
Trigger: ATGGGGTGTGTCGAGCTGGGTTCGAGCGGCAGCACAGCCTACCCAGTTCTGAGCATCTTGGGGCAGATGGAGGCCTCTACCAGATCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454134.1
3UTR GCA 90 bp CAGCAAGGTGCTAGCTGGGAGCCTCCCCCAGCACCAGGAATTCCTTaGACATCTCTCGGACAATCATGCGGTCCATCTGGCACTGGGGTG +
Preference number: 1 (lower is better)
Translates to: QQGASWEPPPAPGIP*TSLGQSCGPSGTGV
Trigger: CACCCCAGTGCCAGATGGACCGCATGATTGTCCGAGAGATGTGCAAGGAATTCCTGGTGCTGGGGGAGGCTCCCAGCTAGCACCTTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413374.1
3UTR GCA 90 bp GGTGGATCAGCTTCTGGAGGACTCCACGCTGTTCCAGGCTGTACTTaGCACCATCCCGCATGGCTGTGTTGTGTACAGCCTCGATGGCCC +
Preference number: 1 (lower is better)
Translates to: GGSASGGLHAVPGCT*HHPAWLCCVQPRWP
Trigger: GGGCCATCGAGGCTGTACACAACACAGCCATGCGGGATGGTGGCAAGTACAGCCTGGAACAGCGTGGAGTCCTCCAGAAGCTGATCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454134.1
3UTR CCA 90 bp GCTCGACACACCCCATTGGGCTGCCTGGCTGCAGCAGCATCCAAGTaGTGGTCACTGGTTGATGAGGTCATAACTGCAACACTGGAGGCT +
Preference number: 1 (lower is better)
Translates to: ARHTPLGCLAAAASK*WSLVDEVITATLEA
Trigger: AGCCTCCAGTGTTGCAGTTATGACCTCATCAACCAGTGACCACCACTTGGATGCTGCTGCAGCCAGGCAGCCCAATGGGGTGTGTCGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454134.1
3UTR CCA 90 bp GCTTTCTCAGTGCCATCATCCTGTTCCATGAGGCTCCAGGATGGATaGCCTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAA +
Preference number: 1 (lower is better)
Translates to: AFSVPSSCSMRLQDG*PVSKIPLSKQQLGQ
Trigger: TTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAGGCCATCCATCCTGGAGCCTCATGGAACAGGATGATGGCACTGAGAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
3UTR CCA 90 bp ATTGGCTTTCTCAGTGCCATCATCCTGTTCCATGAGGCTCCAGGATaGATGGCCTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGG +
Preference number: 1 (lower is better)
Translates to: IGFLSAIILFHEAPG*MACLQDPAFKAAAW
Trigger: CCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAGGCCATCCATCCTGGAGCCTCATGGAACAGGATGATGGCACTGAGAAAGCCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
3UTR TCA 90 bp AAGAGATTCGGTCATTGGCTTTCTCAGTGCCATCATCCTGTTCCATaGGGCTCCAGGATGGATGGCCTGTCTCCAAGATCCCGCTTTCAA +
Preference number: 1 (lower is better)
Translates to: KRFGHWLSQCHHPVP*GSRMDGLSPRSRFQ
Trigger: TTGAAAGCGGGATCTTGGAGACAGGCCATCCATCCTGGAGCCTCATGGAACAGGATGATGGCACTGAGAAAGCCAATGACCGAATCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
3UTR-3UTR GCA 90 bp AGGCCATCAGGGCCTCGCGGTCTCGGCGCTTCACTGGTGGGGGCGGTGTGGTGGCTGGGTAGGCTGTGCTaGCGCTCGAACCCAGCTCGA +
Preference number: 2 (lower is better)
Translates to: RPSGPRGLGASLVGAVWWLGRLC*RSNPAR
Trigger: TCGAGCTGGGTTCGAGCGGCAGCACAGCCTACCCAG...CCACCACACCGCCCCCACCAGTGAAGCGCCGAGACCGCGAGGCCCTGATGGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454134.1
3UTR-3UTR CCA 90 bp GCAGCAGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATGGGTCTGGTCCAGCCTaGAGCGGCAGCAGGACTCTG +
Preference number: 2 (lower is better)
Translates to: AAAWPRPLGVGVKGSDPHGSGPA*SGSRTL
Trigger: CAGAGTCCTGCTGCCGCTCCAGGCTGGACCAGACCC...ATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAAGCTGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
3UTR-3UTR GCA 90 bp AGGCCATCAGGGCCTCGCGGTCTCGGCGCTTCACTGGTGGGGGCGGTGTGGTGGCCATCTGCCCCAAGATaGTCAGAACTGGGTAGGCTG +
Preference number: 2 (lower is better)
Translates to: RPSGPRGLGASLVGAVWWPSAPR*SELGRL
Trigger: CAGCCTACCCAGTTCTGAGCATCTTGGGGCAGATGG...CCACCACACCGCCCCCACCAGTGAAGCGCCGAGACCGCGAGGCCCTGATGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454134.1
3UTR-3UTR TCA 90 bp GCAGCAGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATAGGGGCATGGCTTGCTaGGGCCCAGGATACAGACCA +
Preference number: 2 (lower is better)
Translates to: AAAWPRPLGVGVKGSDPHRGMAC*GPGYRP
Trigger: TGGTCTGTATCCTGGGCCTCAGCAAGCCATGCCCCT...ATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAAGCTGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
3UTR-3UTR CCA 90 bp GCCACCACTCCCAGAGGCCATCAGGGCCTCGCGGTCTCGGCGCTTCACTGGTGGTGGTGGATCAGCTTCTaGAGGACTCCACGCTGTTCC +
Preference number: 2 (lower is better)
Translates to: ATTPRGHQGLAVSALHWWWWISF*RTPRCS
Trigger: GGAACAGCGTGGAGTCCTCCAGAAGCTGATCCACCA...CCACCAGTGAAGCGCCGAGACCGCGAGGCCCTGATGGCCTCTGGGAGTGGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454134.1
3UTR-3UTR CCA 90 bp CCTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTGGGGGCTCACCCCAGGGGCATaGCTTGCTGAGGCCCAGGAT +
Preference number: 2 (lower is better)
Translates to: PVSKIPLSKQQLGQGLWGLTPGA*LAEAQD
Trigger: ATCCTGGGCCTCAGCAAGCCATGCCCCTGGGGTGAG...CCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
3UTR-3UTR CCA 90 bp CTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGCAGCAAGGTGCTAGCTaGGAGCCTCCCCCAGCACCA +
Preference number: 2 (lower is better)
Translates to: LQVGVLLRFLLPPYPLPLQQGAS*EPPPAP
Trigger: TGGTGCTGGGGGAGGCTCCCAGCTAGCACCTTGCTG...CAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000413374.1
3UTR-3UTR CCA 90 bp CATGGTGTTGTGGCCACCACTCCCAGAGGCCATCAGGGCCTCGCGGTCTCGGCGGCAGCATCCAAGTGGTaGTCACTGGTTGATGAGGTC +
Preference number: 2 (lower is better)
Translates to: HGVVATTPRGHQGLAVSAAASKW*SLVDEV
Trigger: GACCTCATCAACCAGTGACCACCACTTGGATGCTGC...CGCCGAGACCGCGAGGCCCTGATGGCCTCTGGGAGTGGTGGCCACAACACCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454134.1
3UTR CAA 90 bp AGGATGGATGGCCTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTaGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCA +
Preference number: 2 (lower is better)
Translates to: RMDGLSPRSRFQSSS*AKASGGRSEGQRPP
Trigger: TGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAGGCCATCCATCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
3UTR CAA 90 bp CCACGCTGTTCCAGGCTGTACTTGCCACCATCCCGCATGGCTGTGTaGTGTACAGCCTCGATGGCCCGGTCAATGGCCTGGAGGACATCC +
Preference number: 2 (lower is better)
Translates to: PRCSRLYLPPSRMAV*CTASMARSMAWRTS
Trigger: GGATGTCCTCCAGGCCATTGACCGGGCCATCGAGGCTGTACACAACACAGCCATGCGGGATGGTGGCAAGTACAGCCTGGAACAGCGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454134.1
3UTR-3UTR GCA 90 bp CCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATGTGCGGGTGGAGCCCTCCCACTGTCAGTaGAAAACATTCTTAGGGCCA +
Preference number: 2 (lower is better)
Translates to: PRPLGVGVKGSDPHVRVEPSHCQ*KTFLGP
Trigger: TGGCCCTAAGAATGTTTTGCACTGACAGTGGGAGGG...CTCCACCCGCACATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
3UTR-3UTR CCA 90 bp TTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATGTGCGGGTAAGTTCTACTTCAGGTaGGGGTCCTGCTCAGGTTCC +
Preference number: 2 (lower is better)
Translates to: LAKASGGRSEGQRPPCAGKFYFR*GSCSGS
Trigger: GGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTT...ACCCGCACATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
3UTR-3UTR CCA 90 bp GGCCTCCATCTGCCCCAAGATGCTCAGAACTGGGTAGGCTGTGCTGCCGCTCGATGTGTACAGCCTCGATaGCCCGGTCAATGGCCTGGA +
Preference number: 2 (lower is better)
Translates to: GLHLPQDAQNWVGCAAARCVQPR*PGQWPG
Trigger: TCCAGGCCATTGACCGGGCCATCGAGGCTGTACACA...TCGAGCGGCAGCACAGCCTACCCAGTTCTGAGCATCTTGGGGCAGATGGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454134.1
3UTR-3UTR CCA 90 bp AGGCTGTGCTGCCGCTCGAACCCAGCTCGACACACCCCATTGGGCTGCCTGGCTGCAGCAGCATCCAAGTaGTGGTCACTGGTTGATGAG +
Preference number: 2 (lower is better)
Translates to: RLCCRSNPARHTPLGCLAAAASK*WSLVDE
Trigger: CTCATCAACCAGTGACCACCACTTGGATGCTGCTGC...AGCCAGGCAGCCCAATGGGGTGTGTCGAGCTGGGTTCGAGCGGCAGCACAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454134.1
3UTR-3UTR CCA 90 bp CATCTGCCCCAAGATGCTCAGAACTGGGTAGGCTGTGCTGCCGCTCGAACCCAGCCCCATTGGGCTGCCTaGCTGCAGCAGCATCCAAGT +
Preference number: 2 (lower is better)
Translates to: HLPQDAQNWVGCAAARTQPHWAA*LQQHPS
Trigger: ACTTGGATGCTGCTGCAGCCAGGCAGCCCAATGGGG...CTGGGTTCGAGCGGCAGCACAGCCTACCCAGTTCTGAGCATCTTGGGGCAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454134.1
3UTR-3UTR TCA 90 bp TGTGCGGGTGGAGGGGAGGACATGAGCAGCACTCACTGCAAAGCTAAGGCAAAGGAGTCCCCTGCACACTaGCTGGAGCTGCAGGGAAGG +
Preference number: 2 (lower is better)
Translates to: CAGGGEDMSSTHCKAKAKESPAH*LELQGR
Trigger: CCTTCCCTGCAGCTCCAGTCAGTGTGCAGGGGACTC...CTTTGCCTTAGCTTTGCAGTGAGTGCTGCTCATGTCCTCCCCTCCACCCGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
3UTR-3UTR CCA 90 bp TGTGCGGGTGGAGGGGAGGACATGAGCAGCACTCACTGCAAAGCTAAGGCAAAGACAGACCAGGAGGGGTaGGGATGGGGGTCTGGTCCA +
Preference number: 2 (lower is better)
Translates to: CAGGGEDMSSTHCKAKAKTDQEG*GWGSGP
Trigger: TGGACCAGACCCCCATCCCCACCCCTCCTGGTCTGT...CTTTGCCTTAGCTTTGCAGTGAGTGCTGCTCATGTCCTCCCCTCCACCCGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
3UTR CAA 90 bp TGGTGGATCAGCTTCTGGAGGACTCCACGCTGTTCCAGGCTGTACTaGCCACCATCCCGCATGGCTGTGTTGTGTACAGCCTCGATGGCC +
Preference number: 2 (lower is better)
Translates to: WWISFWRTPRCSRLY*PPSRMAVLCTASMA
Trigger: GGCCATCGAGGCTGTACACAACACAGCCATGCGGGATGGTGGCAAGTACAGCCTGGAACAGCGTGGAGTCCTCCAGAAGCTGATCCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454134.1
3UTR-3UTR CCA 90 bp CAGGATGGATGGCCTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAACCCCTGCACACTGACTaGAGCTGCAGGGAAGGGAGG +
Preference number: 2 (lower is better)
Translates to: QDGWPVSKIPLSKQQLGQPLHTD*SCREGR
Trigger: CCTCCCTTCCCTGCAGCTCCAGTCAGTGTGCAGGGG...TTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAGGCCATCCATCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
3UTR-3UTR CCA 90 bp GGCCTCCATCTGCCCCAAGATGCTCAGAACTGGGTAGGCTGTGCTGCCGCTCGAGTCTCTTTCCGGTGGTaGATCAGCTTCTGGAGGACT +
Preference number: 2 (lower is better)
Translates to: GLHLPQDAQNWVGCAAARVSFRW*ISFWRT
Trigger: AGTCCTCCAGAAGCTGATCCACCACCGGAAAGAGAC...TCGAGCGGCAGCACAGCCTACCCAGTTCTGAGCATCTTGGGGCAGATGGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454134.1
3UTR-3UTR TCA 90 bp TTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGAGTCCCCTGCACACTaGCTGGAGCTGCAGGGAAGG +
Preference number: 2 (lower is better)
Translates to: LAPLLSSTSGGGPAQVPSESPAH*LELQGR
Trigger: CCTTCCCTGCAGCTCCAGTCAGTGTGCAGGGGACTC...AGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
3UTR-3UTR TCA 90 bp ATGGTCCCCAATCCTACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGGAGTCCCCTGCACACTaGCTGGAGCTGCAGGGAAGG +
Preference number: 2 (lower is better)
Translates to: MVPNPTLGPSLKFYFRWGESPAH*LELQGR
Trigger: CCTTCCCTGCAGCTCCAGTCAGTGTGCAGGGGACTC...CCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGTAGGATTGGGGACCAT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
3UTR-3UTR GCA 90 bp CAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGCTTGCATATTCCCCCTaGCCCAGAACAGCTCCCAGA +
Preference number: 2 (lower is better)
Translates to: QDPAFKAAAWPRPLGVGVLAYSP*PRTAPR
Trigger: TCTGGGAGCTGTTCTGGGGCAGGGGGAATATGCAAG...CACTCCTACCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
3UTR-3UTR GCA 90 bp CTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGCCCTCCCACTGTCAGTaGAAAACATTCTTAGGGCCA +
Preference number: 2 (lower is better)
Translates to: LQVGVLLRFLLPPYPLPLPSHCQ*KTFLGP
Trigger: TGGCCCTAAGAATGTTTTGCACTGACAGTGGGAGGG...CAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
3UTR-3UTR GCA 90 bp TGTGCGGGTGGAGGGGAGGACATGAGCAGCACTCACTGCAAAGCTAAGGCAAAGCTTGCATATTCCCCCTaGCCCAGAACAGCTCCCAGA +
Preference number: 2 (lower is better)
Translates to: CAGGGEDMSSTHCKAKAKLAYSP*PRTAPR
Trigger: TCTGGGAGCTGTTCTGGGGCAGGGGGAATATGCAAG...CTTTGCCTTAGCTTTGCAGTGAGTGCTGCTCATGTCCTCCCCTCCACCCGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
3UTR-3UTR CCA 90 bp AATCCTACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCACCCCTGCACACTGACTaGAGCTGCAGGGAAGGGAGG +
Preference number: 2 (lower is better)
Translates to: NPTLGPSLKFYFRWGSCSPLHTD*SCREGR
Trigger: CCTCCCTTCCCTGCAGCTCCAGTCAGTGTGCAGGGG...TGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGTAGGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
3UTR-3UTR CCA 90 bp GAGATTCGGTCATTGGCTTTCTCAGTGCCATCATCCTGTTCCATGAGGCTCCAGACCCCCATGTGCGGGTaGAGGGGAGGACATGAGCAG +
Preference number: 2 (lower is better)
Translates to: EIRSLAFSVPSSCSMRLQTPMCG*RGGHEQ
Trigger: CTGCTCATGTCCTCCCCTCCACCCGCACATGGGGGT...CTGGAGCCTCATGGAACAGGATGATGGCACTGAGAAAGCCAATGACCGAATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
3UTR-3UTR CCA 90 bp ACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCATCATGCGGTCCATCTaGCACTGGGGTGAGGTCTCC +
Preference number: 2 (lower is better)
Translates to: TLGPSLKFYFRWGSCSGSIMRSI*HWGEVS
Trigger: GGAGACCTCACCCCAGTGCCAGATGGACCGCATGAT...GGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413374.1
3UTR-3UTR GCA 90 bp CCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACTCTCTCGGACAATCATaGGGTCCATCTGGCACTGGG +
Preference number: 2 (lower is better)
Translates to: PSLKFYFRWGSCSGSFCHSLGQS*GPSGTG
Trigger: CCCAGTGCCAGATGGACCGCATGATTGTCCGAGAGA...GTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413374.1
3UTR-3UTR CCA 90 bp CTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTCCCCTGCACACTGACTaGAGCTGCAGGGAAGGGAGG +
Preference number: 2 (lower is better)
Translates to: LRFLLPPYPLPLSVQNILPLHTD*SCREGR
Trigger: CCTCCCTTCCCTGCAGCTCCAGTCAGTGTGCAGGGG...AAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
3UTR-3UTR GCA 90 bp CTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATTCAGGTGGGGGTCCTaGTCAGGTTCCTTCTGCCAC +
Preference number: 2 (lower is better)
Translates to: LLSSTSGGGPAQVPSATLFRWGS*SGSFCH
Trigger: GTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAA...TAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
3UTR-3UTR CCA 90 bp ACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCACAGCTCCCAGACCATaGTCCCCAATCCTACACTTG +
Preference number: 2 (lower is better)
Translates to: TLGPSLKFYFRWGSCSGSTAPRP*SPILHL
Trigger: CAAGTGTAGGATTGGGGACCATGGTCTGGGAGCTGT...GGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
3UTR-3UTR GCA 90 bp CCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCCCTCCCACTGTCAGTaGAAAACATTCTTAGGGCCA +
Preference number: 2 (lower is better)
Translates to: PSLKFYFRWGSCSGSFCHPSHCQ*KTFLGP
Trigger: TGGCCCTAAGAATGTTTTGCACTGACAGTGGGAGGG...GTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
3UTR-3UTR GCA 90 bp CTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTTTCAGGTGGGGGTCCTaGTCAGGTTCCTTCTGCCAC +
Preference number: 2 (lower is better)
Translates to: LRFLLPPYPLPLSVQNILFRWGS*SGSFCH
Trigger: GTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAA...AAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
3UTR CCA 72 bp AGGAGCCGCTGGACACAGAGTTACCCCCGGAGGGCATaGTGTTGTGGCCACCACTCCCAGAGGCCATCAGGG +
Preference number: 3 (lower is better)
Translates to: RSRWTQSYPRRA*CCGHHSQRPSG
Trigger: CCCTGATGGCCTCTGGGAGTGGTGGCCACAACACCATGCCCTCCGGGGGTAACTCTGTGTCCAGCGGCTCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454134.1
3UTR-3UTR CAA 90 bp GTAGGCTGTGCTGCCGCTCGAACCCAGCTCGACACACCCCATTGGGCTGCCTGGTCCCGCATGGCTGTGTaGTGTACAGCCTCGATGGCC +
Preference number: 3 (lower is better)
Translates to: VGCAAARTQLDTPHWAAWSRMAV*CTASMA
Trigger: GGCCATCGAGGCTGTACACAACACAGCCATGCGGGA...CCAGGCAGCCCAATGGGGTGTGTCGAGCTGGGTTCGAGCGGCAGCACAGCCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454134.1
3UTR TCA 72 bp GCTGGTATAGAGCGTGTCCAGGGAGGTGCTGCTGACTaGGGAGCCGCTGGACACAGAGTTACCCCCGGAGGG +
Preference number: 3 (lower is better)
Translates to: AGIERVQGGAAD*GAAGHRVTPGG
Trigger: CCCTCCGGGGGTAACTCTGTGTCCAGCGGCTCCTCAGTCAGCAGCACCTCCCTGGACACGCTCTATACCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454134.1
3UTR GCA 72 bp TCTGCCCCAAGATGCTCAGAACTGGGTAGGCTGTGCTaGCGCTCGAACCCAGCTCGACACACCCCATTGGGC +
Preference number: 3 (lower is better)
Translates to: SAPRCSELGRLC*RSNPARHTPLG
Trigger: GCCCAATGGGGTGTGTCGAGCTGGGTTCGAGCGGCAGCACAGCCTACCCAGTTCTGAGCATCTTGGGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454134.1
3UTR CCA 72 bp GCTCGAACCCAGCTCGACACACCCCATTGGGCTGCCTaGCTGCAGCAGCATCCAAGTGGTGGTCACTGGTTG +
Preference number: 3 (lower is better)
Translates to: ARTQLDTPHWAA*LQQHPSGGHWL
Trigger: CAACCAGTGACCACCACTTGGATGCTGCTGCAGCCAGGCAGCCCAATGGGGTGTGTCGAGCTGGGTTCGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454134.1
3UTR CCA 72 bp GGTAGAGGCCTCCATCTGCCCCAAGATGCTCAGAACTaGGTAGGCTGTGCTGCCGCTCGAACCCAGCTCGAC +
Preference number: 3 (lower is better)
Translates to: GRGLHLPQDAQN*VGCAAARTQLD
Trigger: GTCGAGCTGGGTTCGAGCGGCAGCACAGCCTACCCAGTTCTGAGCATCTTGGGGCAGATGGAGGCCTCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454134.1
3UTR GCA 72 bp CCATCTGCCCCAAGATGCTCAGAACTGGGTAGGCTGTaGTGCCGCTCGAACCCAGCTCGACACACCCCATTG +
Preference number: 3 (lower is better)
Translates to: PSAPRCSELGRL*CRSNPARHTPL
Trigger: CAATGGGGTGTGTCGAGCTGGGTTCGAGCGGCAGCACAGCCTACCCAGTTCTGAGCATCTTGGGGCAGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454134.1
3UTR CCA 72 bp GCTGAAGGGCCTCTGCGTGACAGGGTCTCTTTCCGGTaGTGGATCAGCTTCTGGAGGACTCCACGCTGTTCC +
Preference number: 3 (lower is better)
Translates to: AEGPLRDRVSFR*WISFWRTPRCS
Trigger: GGAACAGCGTGGAGTCCTCCAGAAGCTGATCCACCACCGGAAAGAGACCCTGTCACGCAGAGGCCCTTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454134.1
3UTR GCA 72 bp GCTTCTGGAGGACTCCACGCTGTTCCAGGCTGTACTTaGCACCATCCCGCATGGCTGTGTTGTGTACAGCCT +
Preference number: 3 (lower is better)
Translates to: ASGGLHAVPGCT*HHPAWLCCVQP
Trigger: AGGCTGTACACAACACAGCCATGCGGGATGGTGGCAAGTACAGCCTGGAACAGCGTGGAGTCCTCCAGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454134.1
3UTR CCA 72 bp GTGCCATCATCCTGTTCCATGAGGCTCCAGGATGGATaGCCTGTCTCCAAGATCCCGCTTTCAAAGCAGCAG +
Preference number: 3 (lower is better)
Translates to: VPSSCSMRLQDG*PVSKIPLSKQQ
Trigger: CTGCTGCTTTGAAAGCGGGATCTTGGAGACAGGCCATCCATCCTGGAGCCTCATGGAACAGGATGATGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
3UTR CCA 72 bp ACCCCATTGGGCTGCCTGGCTGCAGCAGCATCCAAGTaGTGGTCACTGGTTGATGAGGTCATAACTGCAACA +
Preference number: 3 (lower is better)
Translates to: TPLGCLAAAASK*WSLVDEVITAT
Trigger: TGTTGCAGTTATGACCTCATCAACCAGTGACCACCACTTGGATGCTGCTGCAGCCAGGCAGCCCAATGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454134.1
3UTR CCA 72 bp CCTACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGTaGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATC +
Preference number: 3 (lower is better)
Translates to: PTLGPSLKFYFR*GSCSGSFCHLI
Trigger: GATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
3UTR CCA 72 bp CTCAGTGCCATCATCCTGTTCCATGAGGCTCCAGGATaGATGGCCTGTCTCCAAGATCCCGCTTTCAAAGCA +
Preference number: 3 (lower is better)
Translates to: LSAIILFHEAPG*MACLQDPAFKA
Trigger: TGCTTTGAAAGCGGGATCTTGGAGACAGGCCATCCATCCTGGAGCCTCATGGAACAGGATGATGGCACTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
3UTR-3UTR CAA 90 bp TCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTTCCCCAATCCTACACTaGGCCCCTCTCTTAAGTTCT +
Preference number: 3 (lower is better)
Translates to: SLKFYFRWGSCSGSFCHLSPILH*APLLSS
Trigger: AGAACTTAAGAGAGGGGCCAAGTGTAGGATTGGGGA...AAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR GCA 90 bp AGGCCATCAGGGCCTCGCGGTCTCGGCGCTTCACTGGTGGGGGCGGTGTGGTGGGCGGCCAGCCACCAGTaGGCGCTGCTTCGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: RPSGPRGLGASLVGAVWWAASHQ*ALLRSS
Trigger: GCTAGAGCGAAGCAGCGCGCACTGGTGGCTGGCCGC...CCACCACACCGCCCCCACCAGTGAAGCGCCGAGACCGCGAGGCCCTGATGGCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR GCA 90 bp GCCATCAGGGCCTCGCGGTCTCGGCGCTTCACTGGTGGGGGCGGTGTGGTGGGTACACGGTGGTGTGGGTaGCTCGGCGGGGCACAGGTG +
Preference number: 4 (lower is better)
Translates to: AIRASRSRRFTGGGGVVGTRWCG*LGGAQV
Trigger: CACCTGTGCCCCGCCGAGGCACCCACACCACCGTGT...ACCCACCACACCGCCCCCACCAGTGAAGCGCCGAGACCGCGAGGCCCTGATGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR CCA 90 bp CCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATGTGCGGGTGGAGGCCCAACTGCGCTGCTaGGCGTCGTCCTTCCGGCGA +
Preference number: 4 (lower is better)
Translates to: PRPLGVGVKGSDPHVRVEAQLRC*ASSFRR
Trigger: TCGCCGGAAGGACGACGCCCAGCAGCGCAGTTGGGC...CTCCACCCGCACATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp GTACAGCCTCGATGGCCCGGTCAATGGCCTGGAGGACATCCTGCTCCAGGCCCTGGGCGGTGTGGTGGGTaGTGCTCGGCGAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: VQPRWPGQWPGGHPAPGPGRCGG*CSARLW
Trigger: CCACAGCCTCGCCGAGCAGCACCCACCACACCGCCC...AGGGCCTGGAGCAGGATGTCCTCCAGGCCATTGACCGGGCCATCGAGGCTGTAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR GCA 90 bp CCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATGTGCGGGTGGAGAGAGCTGGTGGGAGATaGCTCCCCTCACCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: PRPLGVGVKGSDPHVRVERAGGR*LPSPQG
Trigger: CCCCTGGGGTGAGGGGAGGCATCTCCCACCAGCTCT...CTCCACCCGCACATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp TTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATGTGCGGGTTGGGACACGGTGGTGTaGGTGCCTCGGCGGGGCACA +
Preference number: 4 (lower is better)
Translates to: LAKASGGRSEGQRPPCAGWDTVV*VPRRGT
Trigger: TGTGCCCCGCCGAGGCACCCACACCACCGTGTCCCA...ACCCGCACATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp GCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATGTGCGGGTGGAAGCCTCTGCTGGTCGTaGCAGACCTGCCCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: AKASGGRSEGQRPPCAGGSLCWS*QTCPEG
Trigger: GCCCTCAGGGCAGGTCTGCCACGACCAGCAGAGGCT...TCCACCCGCACATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR TCA 90 bp CCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATGTGCGGGTGGAGGGATGTGACCCACTATaGTGCCGATGGCCACCCGGC +
Preference number: 4 (lower is better)
Translates to: PRPLGVGVKGSDPHVRVEGCDPL*CRWPPG
Trigger: GCCGGGTGGCCATCGGCATCATAGTGGGTCACATCC...CTCCACCCGCACATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp GCCACCACTCCCAGAGGCCATCAGGGCCTCGCGGTCTCGGCGCTTCACTGGTGGGAACTGGGTAGGCTGTaGTGCCGCTCGAACCCAGCT +
Preference number: 4 (lower is better)
Translates to: ATTPRGHQGLAVSALHWWELGRL*CRSNPA
Trigger: AGCTGGGTTCGAGCGGCAGCACAGCCTACCCAGTTC...CCACCAGTGAAGCGCCGAGACCGCGAGGCCCTGATGGCCTCTGGGAGTGGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR CCA 90 bp CCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATGTGCGGGTGGAGGCCCGGTCAATGGCCTaGAGGACATCCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PRPLGVGVKGSDPHVRVEARSMA*RTSCSR
Trigger: CCTGGAGCAGGATGTCCTCCAGGCCATTGACCGGGC...CTCCACCCGCACATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR TCA 90 bp TTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATGTGCGGGTAGGGCAGGGCCATGCTaGGGTCCTTGCCCTCTACGA +
Preference number: 4 (lower is better)
Translates to: LAKASGGRSEGQRPPCAGRAGPC*GPCPLR
Trigger: TCGTAGAGGGCAAGGACCTCAGCATGGCCCTGCCCT...ACCCGCACATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp CTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGGCCGGGCAGGGCAGGTaGAGGGAAGGTGGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: LQVGVLLRFLLPPYPLPLAGQGR*REGGKG
Trigger: GCCCTTGCCACCTTCCCTGCACCTGCCCTGCCCGGC...CAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp GTAGGCTGTGCTGCCGCTCGAACCCAGCTCGACACACCCCATTGGGCTGCCTGGCTGGGTAGGCTGTGCTaGCGCTCGAACCCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: VGCAAARTQLDTPHWAAWLGRLC*RSNPAR
Trigger: TCGAGCTGGGTTCGAGCGGCAGCACAGCCTACCCAG...CCAGGCAGCCCAATGGGGTGTGTCGAGCTGGGTTCGAGCGGCAGCACAGCCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR GCA 90 bp CTGACTGAGGAGCCGCTGGACACAGAGTTACCCCCGGAGGGCATGGTGTTGTGGCGGTGTGGTGGGTGCTaGTCGGCGAGGCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LTEEPLDTELPPEGMVLWRCGGC*SARLWW
Trigger: CCACCACAGCCTCGCCGAGCAGCACCCACCACACCG...CCACAACACCATGCCCTCCGGGGGTAACTCTGTGTCCAGCGGCTCCTCAGTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR GCA 90 bp GCAGCAGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATCAGAGGTCCGGCAGCTaGTCTGTGGTGTCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: AAAWPRPLGVGVKGSDPHQRSGS*SVVSKG
Trigger: GCCCTTGGACACCACAGAGCAGCTGCCGGACCTCTG...ATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAAGCTGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGGCGGCGCAGGTAGGCTaGCGGCACGTAGCCCGTCTC +
Preference number: 4 (lower is better)
Translates to: LQVGVLLRFLLPPYPLPLAAQVG*RHVARL
Trigger: GAGACGGGCTACGTGCCGCCAGCCTACCTGCGCCGC...CAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CATCTGCCCCAAGATGCTCAGAACTGGGTAGGCTGTGCTGCCGCTCGAACCCAGGCGGCGCAGGTAGGCTaGCGGCACGTAGCCCGTCTC +
Preference number: 4 (lower is better)
Translates to: HLPQDAQNWVGCAAARTQAAQVG*RHVARL
Trigger: GAGACGGGCTACGTGCCGCCAGCCTACCTGCGCCGC...CTGGGTTCGAGCGGCAGCACAGCCTACCCAGTTCTGAGCATCTTGGGGCAGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR CCA 90 bp GTAGGCTGTGCTGCCGCTCGAACCCAGCTCGACACACCCCATTGGGCTGCCTGGGCCCGGTCAATGGCCTaGAGGACATCCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VGCAAARTQLDTPHWAAWARSMA*RTSCSR
Trigger: CCTGGAGCAGGATGTCCTCCAGGCCATTGACCGGGC...CCAGGCAGCCCAATGGGGTGTGTCGAGCTGGGTTCGAGCGGCAGCACAGCCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR CCA 90 bp AGAGGCCATCAGGGCCTCGCGGTCTCGGCGCTTCACTGGTGGGGGCGGTGTGGTCAGATGGGCTGGAGCTaGTATAGAGCGTGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RGHQGLAVSALHWWGRCGQMGWS*YRACPG
Trigger: CCCTGGACACGCTCTATACCAGCTCCAGCCCATCTG...ACCACACCGCCCCCACCAGTGAAGCGCCGAGACCGCGAGGCCCTGATGGCCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR CCA 90 bp AGGCCATCAGGGCCTCGCGGTCTCGGCGCTTCACTGGTGGGGGCGGTGTGGTGGGGAGCCTGGTTCAGATaGGCTGGAGCTGGTATAGAG +
Preference number: 4 (lower is better)
Translates to: RPSGPRGLGASLVGAVWWGAWFR*AGAGIE
Trigger: CTCTATACCAGCTCCAGCCCATCTGAACCAGGCTCC...CCACCACACCGCCCCCACCAGTGAAGCGCCGAGACCGCGAGGCCCTGATGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR GCA 90 bp CAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGGCCGGGCAGGGCAGGTaGAGGGAAGGTGGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: QDPAFKAAAWPRPLGVGVAGQGR*REGGKG
Trigger: GCCCTTGCCACCTTCCCTGCACCTGCCCTGCCCGGC...CACTCCTACCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp CAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGCGGCCAGCCACCAGTaGGCGCTGCTTCGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: QVGVLLRFLLPPYPLPLSAASHQ*ALLRSS
Trigger: GCTAGAGCGAAGCAGCGCGCACTGGTGGCTGGCCGC...TGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp CGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGACACGGTGGTGTGGGTaGCTCGGCGGGGCACAGGTG +
Preference number: 4 (lower is better)
Translates to: RFQSSSLAKASGGRSEGQTRWCG*LGGAQV
Trigger: CACCTGTGCCCCGCCGAGGCACCCACACCACCGTGT...CTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp GCAGCAGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATCCGGCGAGCCAGGTCTaGAAAGATCACCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: AAAWPRPLGVGVKGSDPHPASQV*KDHLQP
Trigger: AGGCTGGAGGTGATCTTTGCAGACCTGGCTCGCCGG...ATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAAGCTGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCACAGGTGCAGGGAAGGTaGCAAGGGCTGCGGCGCCAC +
Preference number: 4 (lower is better)
Translates to: QVGVLLRFLLPPYPLPLSQVQGR*QGLRRH
Trigger: GTGGCGCCGCAGCCCTTGCCACCTTCCCTGCACCTG...TGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CTCCATCTGCCCCAAGATGCTCAGAACTGGGTAGGCTGTGCTGCCGCTCGAACCCAGGTGCAGGGAAGGTaGCAAGGGCTGCGGCGCCAC +
Preference number: 4 (lower is better)
Translates to: LHLPQDAQNWVGCAAARTQVQGR*QGLRRH
Trigger: GTGGCGCCGCAGCCCTTGCCACCTTCCCTGCACCTG...GGTTCGAGCGGCAGCACAGCCTACCCAGTTCTGAGCATCTTGGGGCAGATGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR CCA 90 bp AGAGGCCATCAGGGCCTCGCGGTCTCGGCGCTTCACTGGTGGGGGCGGTGTGGTAGGGTCTCTTTCCGGTaGTGGATCAGCTTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: RGHQGLAVSALHWWGRCGRVSFR*WISFWR
Trigger: CCTCCAGAAGCTGATCCACCACCGGAAAGAGACCCT...ACCACACCGCCCCCACCAGTGAAGCGCCGAGACCGCGAGGCCCTGATGGCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR CCA 90 bp GTAGGCTGTGCTGCCGCTCGAACCCAGCTCGACACACCCCATTGGGCTGCCTGGCCCCATTGGGCTGCCTaGCTGCAGCAGCATCCAAGT +
Preference number: 4 (lower is better)
Translates to: VGCAAARTQLDTPHWAAWPHWAA*LQQHPS
Trigger: ACTTGGATGCTGCTGCAGCCAGGCAGCCCAATGGGG...CCAGGCAGCCCAATGGGGTGTGTCGAGCTGGGTTCGAGCGGCAGCACAGCCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR CCA 90 bp AGAGGCCATCAGGGCCTCGCGGTCTCGGCGCTTCACTGGTGGGGGCGGTGTGGTCAAGATGCTCAGAACTaGGTAGGCTGTGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: RGHQGLAVSALHWWGRCGQDAQN*VGCAAA
Trigger: AGCGGCAGCACAGCCTACCCAGTTCTGAGCATCTTG...ACCACACCGCCCCCACCAGTGAAGCGCCGAGACCGCGAGGCCCTGATGGCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR CCA 90 bp GCCACCACTCCCAGAGGCCATCAGGGCCTCGCGGTCTCGGCGCTTCACTGGTGGCTGGGAAGATGGAAGTaGGATCTGGTAGAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: ATTPRGHQGLAVSALHWWLGRWK*DLVEAS
Trigger: GGAGGCCTCTACCAGATCCCACTTCCATCTTCCCAG...CCACCAGTGAAGCGCCGAGACCGCGAGGCCCTGATGGCCTCTGGGAGTGGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR CCA 90 bp CTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTGGGACACGGTGGTGTaGGTGCCTCGGCGGGGCACA +
Preference number: 4 (lower is better)
Translates to: LQVGVLLRFLLPPYPLPLWDTVV*VPRRGT
Trigger: TGTGCCCCGCCGAGGCACCCACACCACCGTGTCCCA...CAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CCTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTGGGGGCGGCCCCAATGGTCCTaGGCACAGCCGCCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: PVSKIPLSKQQLGQGLWGRPQWS*AQPPQL
Trigger: CAGCTGAGGCGGCTGTGCCCAGGACCATTGGGGCCG...CCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp GCAGCAGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATCTGTGTGGTAGAAGATaGCAGCTGTGGCCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: AAAWPRPLGVGVKGSDPHLCGRR*QLWPGC
Trigger: GCAGCCCGGCCACAGCTGCCATCTTCTACCACACAG...ATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAAGCTGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR TCA 90 bp CCTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTGGGGGCCAGGGAGGTGCTGCTaGCTGAGGAGCCGCTGGACA +
Preference number: 4 (lower is better)
Translates to: PVSKIPLSKQQLGQGLWGPGRCC*LRSRWT
Trigger: TGTCCAGCGGCTCCTCAGTCAGCAGCACCTCCCTGG...CCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR TCA 90 bp GCAGCAGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATACACAAGCGTGGAGATaGTGGCTGCATCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: AAAWPRPLGVGVKGSDPHTQAWR*WLHPGC
Trigger: GCAGCCTGGATGCAGCCATCATCTCCACGCTTGTGT...ATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAAGCTGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp TGGATCAGCTTCTGGAGGACTCCACGCTGTTCCAGGCTGTACTTGCCACCATCCGCCGGGCAGGGCAGGTaGAGGGAAGGTGGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: WISFWRTPRCSRLYLPPSAGQGR*REGGKG
Trigger: GCCCTTGCCACCTTCCCTGCACCTGCCCTGCCCGGC...GGATGGTGGCAAGTACAGCCTGGAACAGCGTGGAGTCCTCCAGAAGCTGATCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR GCA 90 bp TTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATGTGCGGGTGTTCCAGGCTGTACTTaGCACCATCCCGCATGGCTG +
Preference number: 4 (lower is better)
Translates to: LAKASGGRSEGQRPPCAGVPGCT*HHPAWL
Trigger: CAGCCATGCGGGATGGTGGCAAGTACAGCCTGGAAC...ACCCGCACATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp ACACAGAGTTACCCCCGGAGGGCATGGTGTTGTGGCCACCACTCCCAGAGGCCACACACCCCATTGGGCTaGCTGGCTGCAGCAGCATCC +
Preference number: 4 (lower is better)
Translates to: TQSYPRRAWCCGHHSQRPHTPLG*LAAAAS
Trigger: GGATGCTGCTGCAGCCAGGCAGCCCAATGGGGTGTG...TGGCCTCTGGGAGTGGTGGCCACAACACCATGCCCTCCGGGGGTAACTCTGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR GCA 90 bp CCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATGTGCGGGTGGAGCCATCTGCCCCAAGATaGTCAGAACTGGGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: PRPLGVGVKGSDPHVRVEPSAPR*SELGRL
Trigger: CAGCCTACCCAGTTCTGAGCATCTTGGGGCAGATGG...CTCCACCCGCACATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp TCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCCGGTGTGGTGGGTGCTaGTCGGCGAGGCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: STSGGGPAQVPSATLSPPRCGGC*SARLWW
Trigger: CCACCACAGCCTCGCCGAGCAGCACCCACCACACCG...GGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp GCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATGTGCGGGTGGAGTGTGCATAGGGCACTaGCTCTCCCATGGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: AKASGGRSEGQRPPCAGGVCIGH*LSHGED
Trigger: GTCTTCTCCATGGGAGAGGCAGTGCCCTATGCACAC...TCCACCCGCACATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp TTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATGTGCGGGTACTGGGCGAAAGGCGTaGCCAGGTGCTCATAGTGTG +
Preference number: 4 (lower is better)
Translates to: LAKASGGRSEGQRPPCAGTGRKA*PGAHSV
Trigger: CACACTATGAGCACCTGGGCACGCCTTTCGCCCAGT...ACCCGCACATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp CCTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTGGGGGCGTCGCAGTATGGCCTaGAGGTCGGGTAGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: PVSKIPLSKQQLGQGLWGRRSMA*RSGSRW
Trigger: CCACCGGCTACCCGACCTGCAGGCCATACTGCGACG...CCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp TCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCCAGGTGCAGGGAAGGTaGCAAGGGCTGCGGCGCCAC +
Preference number: 4 (lower is better)
Translates to: STSGGGPAQVPSATLSPPQVQGR*QGLRRH
Trigger: GTGGCGCCGCAGCCCTTGCCACCTTCCCTGCACCTG...GGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp GCAGCAGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATTGTGTACAGCCTCGATaGCCCGGTCAATGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: AAAWPRPLGVGVKGSDPHCVQPR*PGQWPG
Trigger: TCCAGGCCATTGACCGGGCCATCGAGGCTGTACACA...ATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAAGCTGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp GGCCTCCATCTGCCCCAAGATGCTCAGAACTGGGTAGGCTGTGCTGCCGCTCGACTCGACACACCCCATTaGGCTGCCTGGCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GLHLPQDAQNWVGCAAARLDTPH*AAWLQQ
Trigger: CTGCTGCAGCCAGGCAGCCCAATGGGGTGTGTCGAG...TCGAGCGGCAGCACAGCCTACCCAGTTCTGAGCATCTTGGGGCAGATGGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR CCA 90 bp CCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATGTGCGGGTGGAGCAAGATGCTCAGAACTaGGTAGGCTGTGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: PRPLGVGVKGSDPHVRVEQDAQN*VGCAAA
Trigger: AGCGGCAGCACAGCCTACCCAGTTCTGAGCATCTTG...CTCCACCCGCACATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTGGGGGTTCGGCGCTTCACTGGTaGGGGCGGTGTGGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: LSPRSRFQSSSLAKASGGSALHW*GRCGGC
Trigger: GCACCCACCACACCGCCCCCACCAGTGAAGCGCCGA...ACCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp AGGCTGTACTTGCCACCATCCCGCATGGCTGTGTTGTGTACAGCCTCGATGGCCGTCTCGGCGCTTCACTaGTGGGGGCGGTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: RLYLPPSRMAVLCTASMAVSALH*WGRCGG
Trigger: CCCACCACACCGCCCCCACCAGTGAAGCGCCGAGAC...GGCCATCGAGGCTGTACACAACACAGCCATGCGGGATGGTGGCAAGTACAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR CCA 90 bp CTGACTGAGGAGCCGCTGGACACAGAGTTACCCCCGGAGGGCATGGTGTTGTGGGAGGGCATGGTGTTGTaGCCACCACTCCCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: LTEEPLDTELPPEGMVLWEGMVL*PPLPEA
Trigger: GGCCTCTGGGAGTGGTGGCCACAACACCATGCCCTC...CCACAACACCATGCCCTCCGGGGGTAACTCTGTGTCCAGCGGCTCCTCAGTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR CCA 90 bp GCCACCACTCCCAGAGGCCATCAGGGCCTCGCGGTCTCGGCGCTTCACTGGTGGCTGGTTCAGATGGGCTaGAGCTGGTATAGAGCGTGT +
Preference number: 4 (lower is better)
Translates to: ATTPRGHQGLAVSALHWWLVQMG*SWYRAC
Trigger: ACACGCTCTATACCAGCTCCAGCCCATCTGAACCAG...CCACCAGTGAAGCGCCGAGACCGCGAGGCCCTGATGGCCTCTGGGAGTGGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR CCA 90 bp ATGGCTGTGTTGTGTACAGCCTCGATGGCCCGGTCAATGGCCTGGAGGACATCCGGACTTGGGACACGGTaGTGTGGGTGCCTCGGCGGG +
Preference number: 4 (lower is better)
Translates to: MAVLCTASMARSMAWRTSGLGTR*CGCLGG
Trigger: CCCGCCGAGGCACCCACACCACCGTGTCCCAAGTCC...GGATGTCCTCCAGGCCATTGACCGGGCCATCGAGGCTGTACACAACACAGCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR CCA 90 bp TTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATGTGCGGGTATCATGCGGTCCATCTaGCACTGGGGTGAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: LAKASGGRSEGQRPPCAGIMRSI*HWGEVS
Trigger: GGAGACCTCACCCCAGTGCCAGATGGACCGCATGAT...ACCCGCACATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR TCA 90 bp GGATGGCCTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCCCAGGGAGGTGCTGCTaGCTGAGGAGCCGCTGGACA +
Preference number: 4 (lower is better)
Translates to: GWPVSKIPLSKQQLGQGLPGRCC*LRSRWT
Trigger: TGTCCAGCGGCTCCTCAGTCAGCAGCACCTCCCTGG...GAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAGGCCATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR TCA 90 bp TCCGGTGGTGGATCAGCTTCTGGAGGACTCCACGCTGTTCCAGGCTGTACTTGCCCAGGGAGGTGCTGCTaGCTGAGGAGCCGCTGGACA +
Preference number: 4 (lower is better)
Translates to: SGGGSASGGLHAVPGCTCPGRCC*LRSRWT
Trigger: TGTCCAGCGGCTCCTCAGTCAGCAGCACCTCCCTGG...GCAAGTACAGCCTGGAACAGCGTGGAGTCCTCCAGAAGCTGATCCACCACCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR TCA 90 bp TTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATGTGCGGGTCAGGTCATCAGAGGCTaGGGTTGTACCAGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: LAKASGGRSEGQRPPCAGQVIRG*GCTSCH
Trigger: GTGGCAACTGGTACAACCTCAGCCTCTGATGACCTG...ACCCGCACATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR TCA 90 bp CGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGGAGTCCCCTGCACACTaGCTGGAGCTGCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: RFQSSSLAKASGGRSEGQESPAH*LELQGR
Trigger: CCTTCCCTGCAGCTCCAGTCAGTGTGCAGGGGACTC...CTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp CCTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTGGGGGCTGGGTAGGCTGTGCTaGCGCTCGAACCCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: PVSKIPLSKQQLGQGLWGLGRLC*RSNPAR
Trigger: TCGAGCTGGGTTCGAGCGGCAGCACAGCCTACCCAG...CCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp GCAGCAGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATTCTCTCGGACAATCATaGGGTCCATCTGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: AAAWPRPLGVGVKGSDPHSLGQS*GPSGTG
Trigger: CCCAGTGCCAGATGGACCGCATGATTGTCCGAGAGA...ATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAAGCTGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCCGAACGCCAGCGCGTTaGGCTCCGCCGAGCGGAACG +
Preference number: 4 (lower is better)
Translates to: LGPSLKFYFRWGSCSGSFRTPAR*APPSGT
Trigger: CGTTCCGCTCGGCGGAGCCCAACGCGCTGGCGTTCG...GAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp GTAGGCTGTGCTGCCGCTCGAACCCAGCTCGACACACCCCATTGGGCTGCCTGGTGGTGGATCAGCTTCTaGAGGACTCCACGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: VGCAAARTQLDTPHWAAWWWISF*RTPRCS
Trigger: GGAACAGCGTGGAGTCCTCCAGAAGCTGATCCACCA...CCAGGCAGCCCAATGGGGTGTGTCGAGCTGGGTTCGAGCGGCAGCACAGCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR CCA 90 bp AGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATGTGCGAGGGTCTCTTTCCGGTaGTGGATCAGCTTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: SLAKASGGRSEGQRPPCARVSFR*WISFWR
Trigger: CCTCCAGAAGCTGATCCACCACCGGAAAGAGACCCT...CGCACATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp AGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATGTGCGGGCTGTGGTGGGATCTaGGAAGATGGAAGTGGGATC +
Preference number: 4 (lower is better)
Translates to: SLAKASGGRSEGQRPPCAGCGGI*EDGSGI
Trigger: GATCCCACTTCCATCTTCCCAGATCCCACCACAGCC...CGCACATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294129.7
CDS-3UTR CCA 90 bp TGTTCCAGGCTGTACTTGCCACCATCCCGCATGGCTGTGTTGTGTACAGCCTCGTCGGCGCTTCACTGGTaGGGGCGGTGTGGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: CSRLYLPPSRMAVLCTASSALHW*GRCGGC
Trigger: GCACCCACCACACCGCCCCCACCAGTGAAGCGCCGA...CGAGGCTGTACACAACACAGCCATGCGGGATGGTGGCAAGTACAGCCTGGAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR CCA 90 bp GCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCTACCCCCGGAGGGCATaGTGTTGTGGCCACCACTCC +
Preference number: 4 (lower is better)
Translates to: AFKAAAWPRPLGVGVKGSYPRRA*CCGHHS
Trigger: GGAGTGGTGGCCACAACACCATGCCCTCCGGGGGTA...GCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CTTTCCGGTGGTGGATCAGCTTCTGGAGGACTCCACGCTGTTCCAGGCTGTACTTGGGACACGGTGGTGTaGGTGCCTCGGCGGGGCACA +
Preference number: 4 (lower is better)
Translates to: LSGGGSASGGLHAVPGCTWDTVV*VPRRGT
Trigger: TGTGCCCCGCCGAGGCACCCACACCACCGTGTCCCA...AGTACAGCCTGGAACAGCGTGGAGTCCTCCAGAAGCTGATCCACCACCGGAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR CCA 90 bp TGTGCGGGTGGAGGGGAGGACATGAGCAGCACTCACTGCAAAGCTAAGGCAAAGCGGCCCCAATGGTCCTaGGCACAGCCGCCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: CAGGGEDMSSTHCKAKAKRPQWS*AQPPQL
Trigger: CAGCTGAGGCGGCTGTGCCCAGGACCATTGGGGCCG...CTTTGCCTTAGCTTTGCAGTGAGTGCTGCTCATGTCCTCCCCTCCACCCGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTGGGGGTTCAGCTCGGCCCCAATaGTCCTGGGCACAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: LSPRSRFQSSSLAKASGGSARPQ*SWAQPP
Trigger: AGGCGGCTGTGCCCAGGACCATTGGGGCCGAGCTGA...ACCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp GGATGGCCTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCGGGTCTGGTCCAGCCTaGAGCGGCAGCAGGACTCTG +
Preference number: 4 (lower is better)
Translates to: GWPVSKIPLSKQQLGQGLGSGPA*SGSRTL
Trigger: CAGAGTCCTGCTGCCGCTCCAGGCTGGACCAGACCC...GAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAGGCCATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CCTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTGGGGGACCCCCATGTGCGGGTaGAGGGGAGGACATGAGCAG +
Preference number: 4 (lower is better)
Translates to: PVSKIPLSKQQLGQGLWGTPMCG*RGGHEQ
Trigger: CTGCTCATGTCCTCCCCTCCACCCGCACATGGGGGT...CCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCATCGGCGAGGCTGTGGTaGGATCTGGTAGAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: QVGVLLRFLLPPYPLPLSSARLW*DLVEAS
Trigger: GGAGGCCTCTACCAGATCCCACCACAGCCTCGCCGA...TGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416649.6
CDS-3UTR TCA 90 bp ACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCCTGCTCCATGACTGGTaGGCTGGCCGGCACCGAGGC +
Preference number: 4 (lower is better)
Translates to: TLGPSLKFYFRWGSCSGSLLHDW*AGRHRG
Trigger: GCCTCGGTGCCGGCCAGCTCACCAGTCATGGAGCAG...GGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR TCA 90 bp CAGGATGGATGGCCTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAACTGCTCCATGACTGGTaGGCTGGCCGGCACCGAGGC +
Preference number: 4 (lower is better)
Translates to: QDGWPVSKIPLSKQQLGQLLHDW*AGRHRG
Trigger: GCCTCGGTGCCGGCCAGCTCACCAGTCATGGAGCAG...TTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAGGCCATCCATCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR TCA 90 bp CTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTGGGGGTAGGGCAGGGCCATGCTaGGGTCCTTGCCCTCTACGA +
Preference number: 4 (lower is better)
Translates to: LSPRSRFQSSSLAKASGGRAGPC*GPCPLR
Trigger: TCGTAGAGGGCAAGGACCTCAGCATGGCCCTGCCCT...ACCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR TCA 90 bp GCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATGTGCGGGTGGACTAGGTAGCAGCGGATaGCACCCTCATCCTCATATA +
Preference number: 4 (lower is better)
Translates to: AKASGGRSEGQRPPCAGGLGSSG*HPHPHI
Trigger: TATATGAGGATGAGGGTGTCATCCGCTGCTACCTAG...TCCACCCGCACATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR TCA 90 bp CGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGAGGGGCATGGCTTGCTaGGGCCCAGGATACAGACCA +
Preference number: 4 (lower is better)
Translates to: RFQSSSLAKASGGRSEGQRGMAC*GPGYRP
Trigger: TGGTCTGTATCCTGGGCCTCAGCAAGCCATGCCCCT...CTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR TCA 90 bp CTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGAGGGGCATGGCTTGCTaGGGCCCAGGATACAGACCA +
Preference number: 4 (lower is better)
Translates to: LQVGVLLRFLLPPYPLPLRGMAC*GPGYRP
Trigger: TGGTCTGTATCCTGGGCCTCAGCAAGCCATGCCCCT...CAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp GGCCTCCATCTGCCCCAAGATGCTCAGAACTGGGTAGGCTGTGCTGCCGCTCGAAGGCTGAAGGGCCTCTaGGTGACAGGGTCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: GLHLPQDAQNWVGCAAARRLKGL*VTGSLS
Trigger: GGAAAGAGACCCTGTCACGCAGAGGCCCTTCAGCCT...TCGAGCGGCAGCACAGCCTACCCAGTTCTGAGCATCTTGGGGCAGATGGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR GCA 90 bp GGCCTCCATCTGCCCCAAGATGCTCAGAACTGGGTAGGCTGTGCTGCCGCTCGAATTGGGCTGCCTGGCTaGAGCAGCATCCAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: GLHLPQDAQNWVGCAAARIGLPG*SSIQVV
Trigger: CACCACTTGGATGCTGCTGCAGCCAGGCAGCCCAAT...TCGAGCGGCAGCACAGCCTACCCAGTTCTGAGCATCTTGGGGCAGATGGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR GCA 90 bp CTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTGGGGGTCTGGGTAGGCTGTGCTaGCGCTCGAACCCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: LSPRSRFQSSSLAKASGGLGRLC*RSNPAR
Trigger: TCGAGCTGGGTTCGAGCGGCAGCACAGCCTACCCAG...ACCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp AGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATGTGCGGTAGAGGCCTCCATCTaGCCCAAGATGCTCAGAACT +
Preference number: 4 (lower is better)
Translates to: SLAKASGGRSEGQRPPCAVEASI*PKMLRT
Trigger: AGTTCTGAGCATCTTGGGGCAGATGGAGGCCTCTAC...CGCACATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp CAGGATGGATGGCCTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAACGGTGTGGTGGGTGCTaGTCGGCGAGGCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: QDGWPVSKIPLSKQQLGQRCGGC*SARLWW
Trigger: CCACCACAGCCTCGCCGAGCAGCACCCACCACACCG...TTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAGGCCATCCATCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp TGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAGGGCCAAGCCCCACACGGTGGTGTGGGTaGCTCGGCGGGGCACAGGTG +
Preference number: 4 (lower is better)
Translates to: CHLIPSHCQCKTFLGPSPTRWCG*LGGAQV
Trigger: CACCTGTGCCCCGCCGAGGCACCCACACCACCGTGT...GGGGCTTGGCCCTAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp TGTGCGGGTGGAGGGGAGGACATGAGCAGCACTCACTGCAAAGCTAAGGCAAAGAGTGCCCAACTGCGCTaGTGGGCGTCGTCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: CAGGGEDMSSTHCKAKAKSAQLR*WASSFR
Trigger: CCGGAAGGACGACGCCCAGCAGCGCAGTTGGGCACT...CTTTGCCTTAGCTTTGCAGTGAGTGCTGCTCATGTCCTCCCCTCCACCCGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp GCAGCAGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATGACAGGTCTGCGATGTaGCGCACAGTGATGTCAATG +
Preference number: 4 (lower is better)
Translates to: AAAWPRPLGVGVKGSDPHDRSAM*RTVMSM
Trigger: CATTGACATCACTGTGCGGCACATCGCAGACCTGTC...ATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAAGCTGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp GCAGCAGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATGTCTCTTTCCGGTGGTaGATCAGCTTCTGGAGGACT +
Preference number: 4 (lower is better)
Translates to: AAAWPRPLGVGVKGSDPHVSFRW*ISFWRT
Trigger: AGTCCTCCAGAAGCTGATCCACCACCGGAAAGAGAC...ATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAAGCTGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp AGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATGTGCGGTCTCTTTCCGGTGGTaGATCAGCTTCTGGAGGACT +
Preference number: 4 (lower is better)
Translates to: SLAKASGGRSEGQRPPCAVSFRW*ISFWRT
Trigger: AGTCCTCCAGAAGCTGATCCACCACCGGAAAGAGAC...CGCACATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp TCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCCTCGACACACCCCATTaGGCTGCCTGGCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: STSGGGPAQVPSATLSPPLDTPH*AAWLQQ
Trigger: CTGCTGCAGCCAGGCAGCCCAATGGGGTGTGTCGAG...GGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp TACAGCCTCGATGGCCCGGTCAATGGCCTGGAGGACATCCTGCTCCAGGCCCTGGGCTGTGGTGGGATCTaGGAAGATGGAAGTGGGATC +
Preference number: 4 (lower is better)
Translates to: YSLDGPVNGLEDILLQALGCGGI*EDGSGI
Trigger: GATCCCACTTCCATCTTCCCAGATCCCACCACAGCC...CAGGGCCTGGAGCAGGATGTCCTCCAGGCCATTGACCGGGCCATCGAGGCTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR CCA 90 bp TCCCGCATGGCTGTGTTGTGTACAGCCTCGATGGCCCGGTCAATGGCCTGGAGGTCGGCGAGGCTGTGGTaGGATCTGGGAAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: SRMAVLCTASMARSMAWRSARLW*DLGRWK
Trigger: CTTCCATCTTCCCAGATCCCACCACAGCCTCGCCGA...CCTCCAGGCCATTGACCGGGCCATCGAGGCTGTACACAACACAGCCATGCGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR CCA 90 bp GGATGGCCTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCGAGGGCATGGTGTTGTaGCCACCACTCCCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: GWPVSKIPLSKQQLGQGLEGMVL*PPLPEA
Trigger: GGCCTCTGGGAGTGGTGGCCACAACACCATGCCCTC...GAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAGGCCATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp ATGGCTGTGTTGTGTACAGCCTCGATGGCCCGGTCAATGGCCTGGAGGACATCCTACCCCCGGAGGGCATaGTGTTGTGGCCACCACTCC +
Preference number: 4 (lower is better)
Translates to: MAVLCTASMARSMAWRTSYPRRA*CCGHHS
Trigger: GGAGTGGTGGCCACAACACCATGCCCTCCGGGGGTA...GGATGTCCTCCAGGCCATTGACCGGGCCATCGAGGCTGTACACAACACAGCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR CCA 90 bp CCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCGGACTTGGGACACGGTaGTGTGGGTGCCTCGGCGGG +
Preference number: 4 (lower is better)
Translates to: PLLSSTSGGGPAQVPSATGLGTR*CGCLGG
Trigger: CCCGCCGAGGCACCCACACCACCGTGTCCCAAGTCC...GGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCACTGTGTGGTAGAAGATaGCAGCTGTGGCCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: QVGVLLRFLLPPYPLPLSLCGRR*QLWPGC
Trigger: GCAGCCCGGCCACAGCTGCCATCTTCTACCACACAG...TGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR CCA 90 bp GCAGCAGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATACAGCTCCCAGACCATaGTCCCCAATCCTACACTTG +
Preference number: 4 (lower is better)
Translates to: AAAWPRPLGVGVKGSDPHTAPRP*SPILHL
Trigger: CAAGTGTAGGATTGGGGACCATGGTCTGGGAGCTGT...ATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAAGCTGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp TGTGCGGGTGGAGGGGAGGACATGAGCAGCACTCACTGCAAAGCTAAGGCAAAGGGGTCTGGTCCAGCCTaGAGCGGCAGCAGGACTCTG +
Preference number: 4 (lower is better)
Translates to: CAGGGEDMSSTHCKAKAKGSGPA*SGSRTL
Trigger: CAGAGTCCTGCTGCCGCTCCAGGCTGGACCAGACCC...CTTTGCCTTAGCTTTGCAGTGAGTGCTGCTCATGTCCTCCCCTCCACCCGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp TCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACAGACCAGGAGGGGTaGGGATGGGGGTCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: STSGGGPAQVPSATLSPPTDQEG*GWGSGP
Trigger: TGGACCAGACCCCCATCCCCACCCCTCCTGGTCTGT...GGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp GGATGGCCTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCACCCCCATGTGCGGGTaGAGGGGAGGACATGAGCAG +
Preference number: 4 (lower is better)
Translates to: GWPVSKIPLSKQQLGQGLTPMCG*RGGHEQ
Trigger: CTGCTCATGTCCTCCCCTCCACCCGCACATGGGGGT...GAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAGGCCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
3UTR CAA 72 bp GGCCTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTaGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GLSPRSRFQSSS*AKASGGRSEGQ
Trigger: CTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
3UTR CAA 72 bp TCCAGGCTGTACTTGCCACCATCCCGCATGGCTGTGTaGTGTACAGCCTCGATGGCCCGGTCAATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SRLYLPPSRMAV*CTASMARSMAW
Trigger: CCAGGCCATTGACCGGGCCATCGAGGCTGTACACAACACAGCCATGCGGGATGGTGGCAAGTACAGCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR TCA 90 bp TGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAGGGCCAAGCCCCGGAGGACCTGCTCCATaGCTGGTGAGCTGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: CHLIPSHCQCKTFLGPSPGGPAP*LVSWPA
Trigger: TGCCGGCCAGCTCACCAGTCATGGAGCAGGTCCTCC...GGGGCTTGGCCCTAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR TCA 90 bp CCTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTGGGGGCGTCCTGCAGGAACTTaGGGACAGAGTGTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: PVSKIPLSKQQLGQGLWGRPAGT*GQSVVA
Trigger: AGCCACCACACTCTGTCCTCAAGTTCCTGCAGGACG...CCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR TCA 90 bp CAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGGCGGCAGCAGGACTCTaGGTGTACACATGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: QDPAFKAAAWPRPLGVGVAAAGL*VYTWVW
Trigger: CCACACCCATGTGTACACTCAGAGTCCTGCTGCCGC...CACTCCTACCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp TGTGCGGGTGGAGGGGAGGACATGAGCAGCACTCACTGCAAAGCTAAGGCAAAGGCCACCAGTGCGCGCTaGTTCGCTCTAGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: CAGGGEDMSSTHCKAKAKATSAR*FALAPG
Trigger: TCCTGGTGCTAGAGCGAAGCAGCGCGCACTGGTGGC...CTTTGCCTTAGCTTTGCAGTGAGTGCTGCTCATGTCCTCCCCTCCACCCGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp GCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCCACACCCCATTGGGCTaGCTGGCTGCAGCAGCATCC +
Preference number: 4 (lower is better)
Translates to: APLLSSTSGGGPAQVPSAHTPLG*LAAAAS
Trigger: GGATGCTGCTGCAGCCAGGCAGCCCAATGGGGTGTG...GGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp GTACAGCCTCGATGGCCCGGTCAATGGCCTGGAGGACATCCTGCTCCAGGCCCTGTAGAGGCCTCCATCTaGCCCAAGATGCTCAGAACT +
Preference number: 4 (lower is better)
Translates to: VQPRWPGQWPGGHPAPGPVEASI*PKMLRT
Trigger: AGTTCTGAGCATCTTGGGGCAGATGGAGGCCTCTAC...AGGGCCTGGAGCAGGATGTCCTCCAGGCCATTGACCGGGCCATCGAGGCTGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR GCA 90 bp AATCCTACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGGCGGTGTGGTGGGTaGTGCTCGGCGAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: NPTLGPSLKFYFRWGSCSGRCGG*CSARLW
Trigger: CCACAGCCTCGCCGAGCAGCACCCACCACACCGCCC...TGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGTAGGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp TCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCATCACCTCCAGCCTCTaGTGGTCGTGGCAGACCTGC +
Preference number: 4 (lower is better)
Translates to: STSGGGPAQVPSATLSPPITSSL*WSWQTC
Trigger: GCAGGTCTGCCACGACCAGCAGAGGCTGGAGGTGAT...GGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp GCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCACTGGGCGAAAGGCGTaGCCAGGTGCTCATAGTGTG +
Preference number: 4 (lower is better)
Translates to: AFKAAAWPRPLGVGVKGSTGRKA*PGAHSV
Trigger: CACACTATGAGCACCTGGGCACGCCTTTCGCCCAGT...GCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp CTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGGGGAGAGGTACTCCATaGGCAGCTTGTCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: LQVGVLLRFLLPPYPLPLGRGTP*AACLLV
Trigger: CACCAGGAGACAAGCTGCGCATGGAGTACCTCTCCC...CAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp CCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCCGTCGCAGTATGGCCTaGAGGTCGGGTAGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: PLLSSTSGGGPAQVPSATRRSMA*RSGSRW
Trigger: CCACCGGCTACCCGACCTGCAGGCCATACTGCGACG...GGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR CCA 90 bp CTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTACGAACGCCAGCGCGTTaGGCTCCGCCGAGCGGAACG +
Preference number: 4 (lower is better)
Translates to: LLSSTSGGGPAQVPSATLRTPAR*APPSGT
Trigger: CGTTCCGCTCGGCGGAGCCCAACGCGCTGGCGTTCG...TAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp AATCCTACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGCGGCGCAGGTAGGCTaGCGGCACGTAGCCCGTCTC +
Preference number: 4 (lower is better)
Translates to: NPTLGPSLKFYFRWGSCSAAQVG*RHVARL
Trigger: GAGACGGGCTACGTGCCGCCAGCCTACCTGCGCCGC...TGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGTAGGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CATCTGCCCCAAGATGCTCAGAACTGGGTAGGCTGTGCTGCCGCTCGAACCCAGTGTGTACAGCCTCGATaGCCCGGTCAATGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: HLPQDAQNWVGCAAARTQCVQPR*PGQWPG
Trigger: TCCAGGCCATTGACCGGGCCATCGAGGCTGTACACA...CTGGGTTCGAGCGGCAGCACAGCCTACCCAGTTCTGAGCATCTTGGGGCAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR CCA 90 bp TACAGCCTCGATGGCCCGGTCAATGGCCTGGAGGACATCCTGCTCCAGGCCCTGGCAGCATCCAAGTGGTaGTCACTGGTTGATGAGGTC +
Preference number: 4 (lower is better)
Translates to: YSLDGPVNGLEDILLQALAASKW*SLVDEV
Trigger: GACCTCATCAACCAGTGACCACCACTTGGATGCTGC...CAGGGCCTGGAGCAGGATGTCCTCCAGGCCATTGACCGGGCCATCGAGGCTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR CCA 90 bp CCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCGGCGCTTCACTGGTaGGGGCGGTGTGGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: PAQVPSATLSPPTVSAKHSALHW*GRCGGC
Trigger: GCACCCACCACACCGCCCCCACCAGTGAAGCGCCGA...ATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp ATCCTACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTCTCGGCGCTTCACTaGTGGGGGCGGTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: ILHLAPLLSSTSGGGPAQVSALH*WGRCGG
Trigger: CCCACCACACCGCCCCCACCAGTGAAGCGCCGAGAC...CTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGTAGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp TGTGCGGGTGGAGGGGAGGACATGAGCAGCACTCACTGCAAAGCTAAGGCAAAGTACCCCCGGAGGGCATaGTGTTGTGGCCACCACTCC +
Preference number: 4 (lower is better)
Translates to: CAGGGEDMSSTHCKAKAKYPRRA*CCGHHS
Trigger: GGAGTGGTGGCCACAACACCATGCCCTCCGGGGGTA...CTTTGCCTTAGCTTTGCAGTGAGTGCTGCTCATGTCCTCCCCTCCACCCGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CTTTCCGGTGGTGGATCAGCTTCTGGAGGACTCCACGCTGTTCCAGGCTGTACTTTGGAGGGAGGGGGCTaGACTTGGGACACGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LSGGGSASGGLHAVPGCTLEGGG*TWDTVV
Trigger: CACCACCGTGTCCCAAGTCCAGCCCCCTCCCTCCAA...AGTACAGCCTGGAACAGCGTGGAGTCCTCCAGAAGCTGATCCACCACCGGAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR CCA 90 bp GCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCGGATGCGTCGCAGTATaGCCTGCAGGTCGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: APLLSSTSGGGPAQVPSAGCVAV*PAGRVA
Trigger: GGCTACCCGACCTGCAGGCCATACTGCGACGCATCC...GGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR CCA 90 bp CAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAATCATGCGGTCCATCTaGCACTGGGGTGAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: QVGVLLRFLLPPYPLPLSIMRSI*HWGEVS
Trigger: GGAGACCTCACCCCAGTGCCAGATGGACCGCATGAT...TGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR CCA 90 bp GCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCCTCACCCCAGGGGCATaGCTTGCTGAGGCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: APLLSSTSGGGPAQVPSALTPGA*LAEAQD
Trigger: ATCCTGGGCCTCAGCAAGCCATGCCCCTGGGGTGAG...GGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR TCA 90 bp GGATGGCCTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCACCGAGGCCTGGATGTaGCCCACTATGATGCCGATG +
Preference number: 4 (lower is better)
Translates to: GWPVSKIPLSKQQLGQGLTEAWM*PTMMPM
Trigger: CATCGGCATCATAGTGGGTCACATCCAGGCCTCGGT...GAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAGGCCATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR TCA 90 bp GGATGGCCTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCGAGCAGCAGCCGCAGTaGTGCTCGGTGTTCCATTTG +
Preference number: 4 (lower is better)
Translates to: GWPVSKIPLSKQQLGQGLEQQPQ*CSVFHL
Trigger: CAAATGGAACACCGAGCATCACTGCGGCTGCTGCTC...GAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAGGCCATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR TCA 90 bp CCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACTGGCGCCAAAGCACTTaGGGAGCAGCAGCCGCAGTG +
Preference number: 4 (lower is better)
Translates to: PSLKFYFRWGSCSGSFCHWRQST*GAAAAV
Trigger: CACTGCGGCTGCTGCTCCTCAAGTGCTTTGGCGCCA...GTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR TCA 90 bp AGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATGTGCGTCTCGGAGAAGATCTTaGCATTGGCGTGTTTGCTCA +
Preference number: 4 (lower is better)
Translates to: SLAKASGGRSEGQRPPCASRRRS*HWRVCS
Trigger: TGAGCAAACACGCCAATGTCAAGATCTTCTCCGAGA...CGCACATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp TCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAGGGCCAGCGGCCAGCCACCAGTaGGCGCTGCTTCGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: SFCHLIPSHCQCKTFLGPAASHQ*ALLRSS
Trigger: GCTAGAGCGAAGCAGCGCGCACTGGTGGCTGGCCGC...TGGCCCTAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp TCAGCTTCTGGAGGACTCCACGCTGTTCCAGGCTGTACTTGCCACCATCCCGCAGTTCCAGGCTGTACTTaGCACCATCCCGCATGGCTG +
Preference number: 4 (lower is better)
Translates to: SASGGLHAVPGCTCHHPAVPGCT*HHPAWL
Trigger: CAGCCATGCGGGATGGTGGCAAGTACAGCCTGGAAC...TGCGGGATGGTGGCAAGTACAGCCTGGAACAGCGTGGAGTCCTCCAGAAGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR GCA 90 bp CTCCATCTGCCCCAAGATGCTCAGAACTGGGTAGGCTGTGCTGCCGCTCGAACCCCATCTGCCCCAAGATaGTCAGAACTGGGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: LHLPQDAQNWVGCAAARTPSAPR*SELGRL
Trigger: CAGCCTACCCAGTTCTGAGCATCTTGGGGCAGATGG...GGTTCGAGCGGCAGCACAGCCTACCCAGTTCTGAGCATCTTGGGGCAGATGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR GCA 90 bp GCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCCACAGCCGCCTCAGCTaGTGCCTTCTCCTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: APLLSSTSGGGPAQVPSAHSRLS*CLLLCG
Trigger: ACCACAGAGGAGAAGGCAGCAGCTGAGGCGGCTGTG...GGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp CAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGTCCTGCGTGTCTGTCTaGATGTCCCTCGCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: QDPAFKAAAWPRPLGVGVSCVSV*MSLASS
Trigger: AGAGCTGGCGAGGGACATGCAGACAGACACGCAGGA...CACTCCTACCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp CAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGTGCATAGGGCACTaGCTCTCCCATGGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: QVGVLLRFLLPPYPLPLSVCIGH*LSHGED
Trigger: GTCTTCTCCATGGGAGAGGCAGTGCCCTATGCACAC...TGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp ATTCCTTGCACATCTCTCGGACAATCATGCGGTCCATCTGGCACTGGGGTGAGGCAGCTGTGGCCGGGCTaGCAAACACGTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: IPCTSLGQSCGPSGTGVRQLWPG*QTRPAG
Trigger: TCCTGCAGGACGTGTTTGGCAGCCCGGCCACAGCTG...CCTCACCCCAGTGCCAGATGGACCGCATGATTGTCCGAGAGATGTGCAAGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413374.1
CDS-3UTR GCA 90 bp CCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATCGTCGCAGTATGGCCTaGAGGTCGGGTAGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: PAQVPSATLSPPTVSAKHRRSMA*RSGSRW
Trigger: CCACCGGCTACCCGACCTGCAGGCCATACTGCGACG...ATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR GCA 90 bp GCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCCTTGCATATTCCCCCTaGCCCAGAACAGCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: AFKAAAWPRPLGVGVKGSLAYSP*PRTAPR
Trigger: TCTGGGAGCTGTTCTGGGGCAGGGGGAATATGCAAG...GCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp AAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCGCCCGGTCAATGGCCTaGAGGACATCCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: KFYFRWGSCSGSFCHLIPARSMA*RTSCSR
Trigger: CCTGGAGCAGGATGTCCTCCAGGCCATTGACCGGGC...GGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp GCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCTGGTGGATCAGCTTCTaGAGGACTCCACGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: AFKAAAWPRPLGVGVKGSWWISF*RTPRCS
Trigger: GGAACAGCGTGGAGTCCTCCAGAAGCTGATCCACCA...GCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp GCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCAGGGTCTCTTTCCGGTaGTGGATCAGCTTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: AFKAAAWPRPLGVGVKGSRVSFR*WISFWR
Trigger: CCTCCAGAAGCTGATCCACCACCGGAAAGAGACCCT...GCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp TGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAGGGCCAAGCCCCCTCGACACACCCCATTaGGCTGCCTGGCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: CHLIPSHCQCKTFLGPSPLDTPH*AAWLQQ
Trigger: CTGCTGCAGCCAGGCAGCCCAATGGGGTGTGTCGAG...GGGGCTTGGCCCTAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CCTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTGGGGGCAAGATGCTCAGAACTaGGTAGGCTGTGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: PVSKIPLSKQQLGQGLWGQDAQN*VGCAAA
Trigger: AGCGGCAGCACAGCCTACCCAGTTCTGAGCATCTTG...CCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGCTGGGAAGATGGAAGTaGGATCTGGTAGAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LQVGVLLRFLLPPYPLPLLGRWK*DLVEAS
Trigger: GGAGGCCTCTACCAGATCCCACTTCCATCTTCCCAG...CAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294129.7
CDS-3UTR CCA 90 bp GGATGGCCTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTCGGCGAGGCTGTGGTaGGATCTGGGAAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: GWPVSKIPLSKQQLGQGLSARLW*DLGRWK
Trigger: CTTCCATCTTCCCAGATCCCACCACAGCCTCGCCGA...GAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAGGCCATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294129.7
CDS-3UTR CCA 90 bp TCCACGCTGTTCCAGGCTGTACTTGCCACCATCCCGCATGGCTGTGTTGTGTACTGCTCGGCGAGGCTGTaGTGGGATCTGGGAAGATGG +
Preference number: 4 (lower is better)
Translates to: STLFQAVLATIPHGCVVYCSARL*WDLGRW
Trigger: CCATCTTCCCAGATCCCACCACAGCCTCGCCGAGCA...GTACACAACACAGCCATGCGGGATGGTGGCAAGTACAGCCTGGAACAGCGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR CCA 90 bp CTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTGGGGGTCAGATGGGCTGGAGCTaGTATAGAGCGTGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LSPRSRFQSSSLAKASGGQMGWS*YRACPG
Trigger: CCCTGGACACGCTCTATACCAGCTCCAGCCCATCTG...ACCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGGAGCCTGGTTCAGATaGGCTGGAGCTGGTATAGAG +
Preference number: 4 (lower is better)
Translates to: QVGVLLRFLLPPYPLPLSGAWFR*AGAGIE
Trigger: CTCTATACCAGCTCCAGCCCATCTGAACCAGGCTCC...TGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTAGGACTTGGGACACGGTaGTGTGGGTGCCTCGGCGGG +
Preference number: 4 (lower is better)
Translates to: LLSSTSGGGPAQVPSATLGLGTR*CGCLGG
Trigger: CCCGCCGAGGCACCCACACCACCGTGTCCCAAGTCC...TAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACTTGGAGGGAGGGGGCTaGACTTGGGACACGGTGGTG +
Preference number: 4 (lower is better)
Translates to: PSLKFYFRWGSCSGSFCHLEGGG*TWDTVV
Trigger: CACCACCGTGTCCCAAGTCCAGCCCCCTCCCTCCAA...GTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp TCCACGCTGTTCCAGGCTGTACTTGCCACCATCCCGCATGGCTGTGTTGTGTACCAGGTGCTGATGCCTTaGAGGGAGGGGGCTGGACTT +
Preference number: 4 (lower is better)
Translates to: STLFQAVLATIPHGCVVYQVLMP*REGAGL
Trigger: AAGTCCAGCCCCCTCCCTCCAAGGCATCAGCACCTG...GTACACAACACAGCCATGCGGGATGGTGGCAAGTACAGCCTGGAACAGCGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR CCA 90 bp ATGGTCCCCAATCCTACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGAGCCTCTGCTGGTCGTaGCAGACCTGCCCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: MVPNPTLGPSLKFYFRWGSLCWS*QTCPEG
Trigger: GCCCTCAGGGCAGGTCTGCCACGACCAGCAGAGGCT...CCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGTAGGATTGGGGACCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCACCTCCAGCCTCTGCTaGTCGTGGCAGACCTGCCCT +
Preference number: 4 (lower is better)
Translates to: PLLSSTSGGGPAQVPSATTSSLC*SWQTCP
Trigger: AGGGCAGGTCTGCCACGACCAGCAGAGGCTGGAGGT...GGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp TCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAGGGCCAGCCCAACTGCGCTGCTaGGCGTCGTCCTTCCGGCGA +
Preference number: 4 (lower is better)
Translates to: SFCHLIPSHCQCKTFLGPAQLRC*ASSFRR
Trigger: TCGCCGGAAGGACGACGCCCAGCAGCGCAGTTGGGC...TGGCCCTAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGATGTTCAGTAGGAACTaGGCGAAAGGCGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RFQSSSLAKASGGRSEGQMFSRN*AKGVPR
Trigger: CCTGGGCACGCCTTTCGCCCAGTTCCTACTGAACAT...CTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAATGTTCAGTAGGAACTaGGCGAAAGGCGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QVGVLLRFLLPPYPLPLSMFSRN*AKGVPR
Trigger: CCTGGGCACGCCTTTCGCCCAGTTCCTACTGAACAT...TGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAATTCTGGTCAGCAGCTaGCAGGTGCAGGTTGAGAGC +
Preference number: 4 (lower is better)
Translates to: QVGVLLRFLLPPYPLPLSILVSS*QVQVES
Trigger: GCTCTCAACCTGCACCTGCCAGCTGCTGACCAGAAT...TGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR CCA 90 bp GGATGGCCTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCAGAAGATGGCAGCTGTaGCCGGGCTGCCAAACACGT +
Preference number: 4 (lower is better)
Translates to: GWPVSKIPLSKQQLGQGLRRWQL*PGCQTR
Trigger: ACGTGTTTGGCAGCCCGGCCACAGCTGCCATCTTCT...GAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAGGCCATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp AAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCGGATGCGTCGCAGTATaGCCTGCAGGTCGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: KFYFRWGSCSGSFCHLIPGCVAV*PAGRVA
Trigger: GGCTACCCGACCTGCAGGCCATACTGCGACGCATCC...GGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR CCA 90 bp CCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCCCCTGCACACTGACTaGAGCTGCAGGGAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: PSLKFYFRWGSCSGSFCHPLHTD*SCREGR
Trigger: CCTCCCTTCCCTGCAGCTCCAGTCAGTGTGCAGGGG...GTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR CCA 90 bp CTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCCCCCTGCACACTGACTaGAGCTGCAGGGAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LGPSLKFYFRWGSCSGSFPLHTD*SCREGR
Trigger: CCTCCCTTCCCTGCAGCTCCAGTCAGTGTGCAGGGG...GAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR TCA 90 bp TGTGCGGGTGGAGGGGAGGACATGAGCAGCACTCACTGCAAAGCTAAGGCAAAGCTGGCAGGTGCAGGTTaGGAGCCAGAAGCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: CAGGGEDMSSTHCKAKAKLAGAG*EPEAGS
Trigger: TGAACCTGCTTCTGGCTCTCAACCTGCACCTGCCAG...CTTTGCCTTAGCTTTGCAGTGAGTGCTGCTCATGTCCTCCCCTCCACCCGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR TCA 90 bp GCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCCATCTGGCACTGGGGTaGGGTCTCCTCCTCATTCAG +
Preference number: 4 (lower is better)
Translates to: APLLSSTSGGGPAQVPSAHLALG*GLLLIQ
Trigger: CTGAATGAGGAGGAGACCTCACCCCAGTGCCAGATG...GGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR TCA 90 bp ATCCTACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGAGTCCCCTGCACACTaGCTGGAGCTGCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: ILHLAPLLSSTSGGGPAQESPAH*LELQGR
Trigger: CCTTCCCTGCAGCTCCAGTCAGTGTGCAGGGGACTC...CTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGTAGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR TCA 90 bp TCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCCATCATCCTGTTCCATaGGGCTCCAGGATGGATGGC +
Preference number: 4 (lower is better)
Translates to: STSGGGPAQVPSATLSPPHHPVP*GSRMDG
Trigger: GCCATCCATCCTGGAGCCTCATGGAACAGGATGATG...GGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR TCA 90 bp CCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCCACCTTGTCTCCTGGTaGCAGGTCTGCGATGTGCCG +
Preference number: 4 (lower is better)
Translates to: PLLSSTSGGGPAQVPSATHLVSW*QVCDVP
Trigger: CGGCACATCGCAGACCTGTCACCAGGAGACAAGGTG...GGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413374.1
CDS-3UTR GCA 90 bp GCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCAGGCTGAAGGGCCTCTaGGTGACAGGGTCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: APLLSSTSGGGPAQVPSARLKGL*VTGSLS
Trigger: GGAAAGAGACCCTGTCACGCAGAGGCCCTTCAGCCT...GGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp TGTGCGGGTGGAGGGGAGGACATGAGCAGCACTCACTGCAAAGCTAAGGCAAAGATTGGGCTGCCTGGCTaGAGCAGCATCCAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: CAGGGEDMSSTHCKAKAKIGLPG*SSIQVV
Trigger: CACCACTTGGATGCTGCTGCAGCCAGGCAGCCCAAT...CTTTGCCTTAGCTTTGCAGTGAGTGCTGCTCATGTCCTCCCCTCCACCCGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp TCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAGGGCGGTGTGGTGGGTaGTGCTCGGCGAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SGSFCHLIPSHCQCKTFLGRCGG*CSARLW
Trigger: CCACAGCCTCGCCGAGCAGCACCCACCACACCGCCC...TAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp TCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCCAGGTGCTCATAGTGTaGATAGGGCACTGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: STSGGGPAQVPSATLSPPQVLIV*IGHCLS
Trigger: GGAGAGGCAGTGCCCTATGCACACTATGAGCACCTG...GGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp CAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCACTGCCAAACACGTCCTaGAGGAACTTGAGGACAGAG +
Preference number: 4 (lower is better)
Translates to: QVGVLLRFLLPPYPLPLSLPNTS*RNLRTE
Trigger: CTCTGTCCTCAAGTTCCTGCAGGACGTGTTTGGCAG...TGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR GCA 90 bp ATCCTACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGCAGCTGTGGCCGGGCTaGCAAACACGTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: ILHLAPLLSSTSGGGPAQQLWPG*QTRPAG
Trigger: TCCTGCAGGACGTGTTTGGCAGCCCGGCCACAGCTG...CTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGTAGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR CCA 90 bp CTCCATCTGCCCCAAGATGCTCAGAACTGGGTAGGCTGTGCTGCCGCTCGAACCGTCTCTTTCCGGTGGTaGATCAGCTTCTGGAGGACT +
Preference number: 4 (lower is better)
Translates to: LHLPQDAQNWVGCAAARTVSFRW*ISFWRT
Trigger: AGTCCTCCAGAAGCTGATCCACCACCGGAAAGAGAC...GGTTCGAGCGGCAGCACAGCCTACCCAGTTCTGAGCATCTTGGGGCAGATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR CCA 90 bp CTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGGCAGCAGCATCCAAGTaGTGGTCACTGGTTGATGAG +
Preference number: 4 (lower is better)
Translates to: LQVGVLLRFLLPPYPLPLAAASK*WSLVDE
Trigger: CTCATCAACCAGTGACCACCACTTGGATGCTGCTGC...CAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp AGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAGGGTCTCGGCGCTTCACTaGTGGGGGCGGTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: RFLLPPYPLPLSVQNILRVSALH*WGRCGG
Trigger: CCCACCACACCGCCCCCACCAGTGAAGCGCCGAGAC...CCTAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp ACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCGTGTGGGTGAGCAGCTaGAGCCTGGTTCAGATGGGC +
Preference number: 4 (lower is better)
Translates to: TLGPSLKFYFRWGSCSGSVWVSS*SLVQMG
Trigger: GCCCATCTGAACCAGGCTCCAGCTGCTCACCCACAC...GGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp TTCCAGGCTGTACTTGCCACCATCCCGCATGGCTGTGTTGTGTACAGCCTCGATGTGTGGGTGAGCAGCTaGAGCCTGGTTCAGATGGGC +
Preference number: 4 (lower is better)
Translates to: FQAVLATIPHGCVVYSLDVWVSS*SLVQMG
Trigger: GCCCATCTGAACCAGGCTCCAGCTGCTCACCCACAC...ATCGAGGCTGTACACAACACAGCCATGCGGGATGGTGGCAAGTACAGCCTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR CCA 90 bp CAGGATGGATGGCCTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAACAGGTGCTGATGCCTTaGAGGGAGGGGGCTGGACTT +
Preference number: 4 (lower is better)
Translates to: QDGWPVSKIPLSKQQLGQQVLMP*REGAGL
Trigger: AAGTCCAGCCCCCTCCCTCCAAGGCATCAGCACCTG...TTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAGGCCATCCATCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp TCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAGGGCCATCAGCTCGGCCCCAATaGTCCTGGGCACAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: SFCHLIPSHCQCKTFLGPSARPQ*SWAQPP
Trigger: AGGCGGCTGTGCCCAGGACCATTGGGGCCGAGCTGA...TGGCCCTAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAACCCGGCATAATTCGTaGCTCAGGCCAGTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: QVGVLLRFLLPPYPLPLSTRHNS*LRPVFL
Trigger: GAGAAACACTGGCCTGAGCCACGAATTATGCCGGGT...TGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp ATCCTACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGACCTCCAGCCTCTGCTaGTCGTGGCAGACCTGCCCT +
Preference number: 4 (lower is better)
Translates to: ILHLAPLLSSTSGGGPAQTSSLC*SWQTCP
Trigger: AGGGCAGGTCTGCCACGACCAGCAGAGGCTGGAGGT...CTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGTAGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp ATCCTACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGCCGGCAGCTGCTCTGTaGTGTCCAAGGGCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: ILHLAPLLSSTSGGGPAQPAAAL*CPRAAH
Trigger: ATGGGCTGCCCTTGGACACCACAGAGCAGCTGCCGG...CTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGTAGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp ACAGCTCCCAGACCATGGTCCCCAATCCTACACTTGGCCCCTCTCTTAAGTTCTCCGGCAGCTGCTCTGTaGTGTCCAAGGGCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: TAPRPWSPILHLAPLLSSPAAAL*CPRAAH
Trigger: ATGGGCTGCCCTTGGACACCACAGAGCAGCTGCCGG...AGAACTTAAGAGAGGGGCCAAGTGTAGGATTGGGGACCATGGTCTGGGAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTGTGTGGTAGAAGATaGCAGCTGTGGCCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: PSLKFYFRWGSCSGSFCHLCGRR*QLWPGC
Trigger: GCAGCCCGGCCACAGCTGCCATCTTCTACCACACAG...GTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR CCA 90 bp ATGGTCCCCAATCCTACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGCAGCAAGGTGCTAGCTaGGAGCCTCCCCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: MVPNPTLGPSLKFYFRWGQQGAS*EPPPAP
Trigger: TGGTGCTGGGGGAGGCTCCCAGCTAGCACCTTGCTG...CCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGTAGGATTGGGGACCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR CCA 90 bp TTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTCAGCAAGGTGCTAGCTaGGAGCCTCCCCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: LAPLLSSTSGGGPAQVPSQQGAS*EPPPAP
Trigger: TGGTGCTGGGGGAGGCTCCCAGCTAGCACCTTGCTG...AGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR CCA 90 bp CCTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTGGGGGACAGCTCCCAGACCATaGTCCCCAATCCTACACTTG +
Preference number: 4 (lower is better)
Translates to: PVSKIPLSKQQLGQGLWGTAPRP*SPILHL
Trigger: CAAGTGTAGGATTGGGGACCATGGTCTGGGAGCTGT...CCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATACAGACCAGGAGGGGTaGGGATGGGGGTCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: PAQVPSATLSPPTVSAKHTDQEG*GWGSGP
Trigger: TGGACCAGACCCCCATCCCCACCCCTCCTGGTCTGT...ATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
3UTR CAA 72 bp AGCTTCTGGAGGACTCCACGCTGTTCCAGGCTGTACTaGCCACCATCCCGCATGGCTGTGTTGTGTACAGCC +
Preference number: 4 (lower is better)
Translates to: SFWRTPRCSRLY*PPSRMAVLCTA
Trigger: GGCTGTACACAACACAGCCATGCGGGATGGTGGCAAGTACAGCCTGGAACAGCGTGGAGTCCTCCAGAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR TCA 90 bp CAGACCATGGTCCCCAATCCTACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGGGATGTGACCCACTATaGTGCCGATGGCCACCCGGC +
Preference number: 4 (lower is better)
Translates to: QTMVPNPTLGPSLKFYFRGCDPL*CRWPPG
Trigger: GCCGGGTGGCCATCGGCATCATAGTGGGTCACATCC...CCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGTAGGATTGGGGACCATGGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR TCA 90 bp CTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTGGAGGACCTGCTCCATaGCTGGTGAGCTGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: LRFLLPPYPLPLSVQNILGGPAP*LVSWPA
Trigger: TGCCGGCCAGCTCACCAGTCATGGAGCAGGTCCTCC...AAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR TCA 90 bp CTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATGGCGCCAAAGCACTTaGGGAGCAGCAGCCGCAGTG +
Preference number: 4 (lower is better)
Translates to: LLSSTSGGGPAQVPSATLWRQST*GAAAAV
Trigger: CACTGCGGCTGCTGCTCCTCAAGTGCTTTGGCGCCA...TAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR TCA 90 bp CAGGATGGATGGCCTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAAACACAAGCGTGGAGATaGTGGCTGCATCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: QDGWPVSKIPLSKQQLGQTQAWR*WLHPGC
Trigger: GCAGCCTGGATGCAGCCATCATCTCCACGCTTGTGT...TTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAGGCCATCCATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR TCA 90 bp CAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGTACAGGCAGCACGGATaGCACAAGCGTGGAGATGAT +
Preference number: 4 (lower is better)
Translates to: QDPAFKAAAWPRPLGVGVYRQHG*HKRGDD
Trigger: ATCATCTCCACGCTTGTGTCATCCGTGCTGCCTGTA...CACTCCTACCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR TCA 90 bp CTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCCTGGCAGGTGCAGGTTaGGAGCCAGAAGCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: LGPSLKFYFRWGSCSGSFLAGAG*EPEAGS
Trigger: TGAACCTGCTTCTGGCTCTCAACCTGCACCTGCCAG...GAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR TCA 90 bp CCAGCACCAGGAATTCCTTGCACATCTCTCGGACAATCATGCGGTCCATCTGGCCGTCCTGCAGGAACTTaGGGACAGAGTGTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: PAPGIPCTSLGQSCGPSGRPAGT*GQSVVA
Trigger: AGCCACCACACTCTGTCCTCAAGTTCCTGCAGGACG...GCCAGATGGACCGCATGATTGTCCGAGAGATGTGCAAGGAATTCCTGGTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413374.1
CDS-3UTR TCA 90 bp TTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTCAGCTTGTCTCCTGGTaGCAGGTCTGCGATGTGCCG +
Preference number: 4 (lower is better)
Translates to: LAPLLSSTSGGGPAQVPSQLVSW*QVCDVP
Trigger: CGGCACATCGCAGACCTGTCACCAGGAGACAAGCTG...AGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR TCA 90 bp AAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCCATCTGGCACTGGGGTaGGGTCTCCTCCTCATTCAG +
Preference number: 4 (lower is better)
Translates to: KFYFRWGSCSGSFCHLIPHLALG*GLLLIQ
Trigger: CTGAATGAGGAGGAGACCTCACCCCAGTGCCAGATG...GGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR TCA 90 bp ATGGTCCCCAATCCTACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGGCGGCAGCAGGACTCTaGGTGTACACATGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: MVPNPTLGPSLKFYFRWGAAAGL*VYTWVW
Trigger: CCACACCCATGTGTACACTCAGAGTCCTGCTGCCGC...CCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGTAGGATTGGGGACCAT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp CTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTAGCCACCAGTGCGCGCTaGTTCGCTCTAGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: LLSSTSGGGPAQVPSATLATSAR*FALAPG
Trigger: TCCTGGTGCTAGAGCGAAGCAGCGCGCACTGGTGGC...TAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp ACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCAGGCTGAAGGGCCTCTaGGTGACAGGGTCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: TLGPSLKFYFRWGSCSGSRLKGL*VTGSLS
Trigger: GGAAAGAGACCCTGTCACGCAGAGGCCCTTCAGCCT...GGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp TCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAGGGCCACACACCCCATTGGGCTaGCTGGCTGCAGCAGCATCC +
Preference number: 4 (lower is better)
Translates to: SFCHLIPSHCQCKTFLGPHTPLG*LAAAAS
Trigger: GGATGCTGCTGCAGCCAGGCAGCCCAATGGGGTGTG...TGGCCCTAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp CCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATCACAGCCGCCTCAGCTaGTGCCTTCTCCTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: PAQVPSATLSPPTVSAKHHSRLS*CLLLCG
Trigger: ACCACAGAGGAGAAGGCAGCAGCTGAGGCGGCTGTG...ATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp ATGGTCCCCAATCCTACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGATCACCTCCAGCCTCTaGTGGTCGTGGCAGACCTGC +
Preference number: 4 (lower is better)
Translates to: MVPNPTLGPSLKFYFRWGITSSL*WSWQTC
Trigger: GCAGGTCTGCCACGACCAGCAGAGGCTGGAGGTGAT...CCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGTAGGATTGGGGACCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp AGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAGGAGTGCCCAACTGCGCTaGTGGGCGTCGTCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: RFLLPPYPLPLSVQNILRSAQLR*WASSFR
Trigger: CCGGAAGGACGACGCCCAGCAGCGCAGTTGGGCACT...CCTAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp ACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCCATATAGTGCCCAACTaGGCTGCTGGGCGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: TLGPSLKFYFRWGSCSGSHIVPN*AAGRRP
Trigger: AGGACGACGCCCAGCAGCGCAGTTGGGCACTATATG...GGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp TGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAGGGCCAAGCCCCTGGCTGCATCCAGGCTaGACATGGCGCCAAAGCACT +
Preference number: 4 (lower is better)
Translates to: CHLIPSHCQCKTFLGPSPWLHPG*TWRQST
Trigger: AGTGCTTTGGCGCCATGTGCAGCCTGGATGCAGCCA...GGGGCTTGGCCCTAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp CCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCGTGGAGATGATGGCTaGATCCAGGCTGCACATGGC +
Preference number: 4 (lower is better)
Translates to: PSLKFYFRWGSCSGSFCHRGDDG*IQAAHG
Trigger: GCCATGTGCAGCCTGGATGCAGCCATCATCTCCACG...GTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp CCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCCGTGGAGATGATGGCTaGATCCAGGCTGCACATGGC +
Preference number: 4 (lower is better)
Translates to: PLLSSTSGGGPAQVPSATRGDDG*IQAAHG
Trigger: GCCATGTGCAGCCTGGATGCAGCCATCATCTCCACG...GGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp CCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACTCCTGCGTGTCTGTCTaGATGTCCCTCGCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: PSLKFYFRWGSCSGSFCHSCVSV*MSLASS
Trigger: AGAGCTGGCGAGGGACATGCAGACAGACACGCAGGA...GTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp CTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTACAGAGGTCCGGCAGCTaGTCTGTGGTGTCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: LLSSTSGGGPAQVPSATLQRSGS*SVVSKG
Trigger: GCCCTTGGACACCACAGAGCAGCTGCCGGACCTCTG...TAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp CTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTACAGCTGTGGCCGGGCTaGCAAACACGTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LLSSTSGGGPAQVPSATLQLWPG*QTRPAG
Trigger: TCCTGCAGGACGTGTTTGGCAGCCCGGCCACAGCTG...TAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR GCA 90 bp TCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCGACAGGTCTGCGATGTaGCGCACAGTGATGTCAATG +
Preference number: 4 (lower is better)
Translates to: STSGGGPAQVPSATLSPPDRSAM*RTVMSM
Trigger: CATTGACATCACTGTGCGGCACATCGCAGACCTGTC...GGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR GCA 90 bp CGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCCCTCCCACTGTCAGTaGAAAACATTCTTAGGGCCA +
Preference number: 4 (lower is better)
Translates to: RFQSSSLAKASGGRSEGQPSHCQ*KTFLGP
Trigger: TGGCCCTAAGAATGTTTTGCACTGACAGTGGGAGGG...CTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp AAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTTCAGGTGGGGGTCCTaGTCAGGTTCCTTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: KFYFRWGSCSGSFCHLIPFRWGS*SGSFCH
Trigger: GTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAA...GGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR GCA 90 bp CTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTTCAGGTGGGGGTCCTaGTCAGGTTCCTTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: LGPSLKFYFRWGSCSGSFFRWGS*SGSFCH
Trigger: GTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAA...GAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR GCA 90 bp CCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACTTCAGGTGGGGGTCCTaGTCAGGTTCCTTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: PSLKFYFRWGSCSGSFCHFRWGS*SGSFCH
Trigger: GTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAA...GTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR GCA 90 bp AGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAGGAGAGCTGGTGGGAGATaGCTCCCCTCACCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: RFLLPPYPLPLSVQNILRRAGGR*LPSPQG
Trigger: CCCCTGGGGTGAGGGGAGGCATCTCCCACCAGCTCT...CCTAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp TGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAGGGCCAAGCCCCTGTGTACAGCCTCGATaGCCCGGTCAATGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: CHLIPSHCQCKTFLGPSPCVQPR*PGQWPG
Trigger: TCCAGGCCATTGACCGGGCCATCGAGGCTGTACACA...GGGGCTTGGCCCTAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTGGGGGTGCAGCATCCAAGTGGTaGTCACTGGTTGATGAGGTC +
Preference number: 4 (lower is better)
Translates to: LSPRSRFQSSSLAKASGGAASKW*SLVDEV
Trigger: GACCTCATCAACCAGTGACCACCACTTGGATGCTGC...ACCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp TACTTGCCACCATCCCGCATGGCTGTGTTGTGTACAGCCTCGATGGCCCGGTCAGCAGCAGCATCCAAGTaGTGGTCACTGGTTGATGAG +
Preference number: 4 (lower is better)
Translates to: YLPPSRMAVLCTASMARSAAASK*WSLVDE
Trigger: CTCATCAACCAGTGACCACCACTTGGATGCTGCTGC...TGACCGGGCCATCGAGGCTGTACACAACACAGCCATGCGGGATGGTGGCAAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR CCA 90 bp TTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTCCCCATTGGGCTGCCTaGCTGCAGCAGCATCCAAGT +
Preference number: 4 (lower is better)
Translates to: LAPLLSSTSGGGPAQVPSPHWAA*LQQHPS
Trigger: ACTTGGATGCTGCTGCAGCCAGGCAGCCCAATGGGG...AGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGCTGGTTCAGATGGGCTaGAGCTGGTATAGAGCGTGT +
Preference number: 4 (lower is better)
Translates to: QDPAFKAAAWPRPLGVGVLVQMG*SWYRAC
Trigger: ACACGCTCTATACCAGCTCCAGCCCATCTGAACCAG...CACTCCTACCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp TCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTTTGGAGGGAGGGGGCTaGACTTGGGACACGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SLKFYFRWGSCSGSFCHLLEGGG*TWDTVV
Trigger: CACCACCGTGTCCCAAGTCCAGCCCCCTCCCTCCAA...AAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATCAGGTGCTGATGCCTTaGAGGGAGGGGGCTGGACTT +
Preference number: 4 (lower is better)
Translates to: PAQVPSATLSPPTVSAKHQVLMP*REGAGL
Trigger: AAGTCCAGCCCCCTCCCTCCAAGGCATCAGCACCTG...ATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp ACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCGCACTGCCTCTCCCATaGAGAAGACCATGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: TLGPSLKFYFRWGSCSGSALPLP*RRPWPG
Trigger: TCCTGGCCATGGTCTTCTCCATGGGAGAGGCAGTGC...GGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp ATTCCTTGCACATCTCTCGGACAATCATGCGGTCCATCTGGCACTGGGGTGAGGAGAAGATGGCAGCTGTaGCCGGGCTGCCAAACACGT +
Preference number: 4 (lower is better)
Translates to: IPCTSLGQSCGPSGTGVRRRWQL*PGCQTR
Trigger: ACGTGTTTGGCAGCCCGGCCACAGCTGCCATCTTCT...CCTCACCCCAGTGCCAGATGGACCGCATGATTGTCCGAGAGATGTGCAAGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413374.1
CDS-3UTR CCA 90 bp GAGATTCGGTCATTGGCTTTCTCAGTGCCATCATCCTGTTCCATGAGGCTCCAGGGATGCGTCGCAGTATaGCCTGCAGGTCGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: EIRSLAFSVPSSCSMRLQGCVAV*PAGRVA
Trigger: GGCTACCCGACCTGCAGGCCATACTGCGACGCATCC...CTGGAGCCTCATGGAACAGGATGATGGCACTGAGAAAGCCAATGACCGAATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTACAGCAAGGTGCTAGCTaGGAGCCTCCCCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: LLSSTSGGGPAQVPSATLQQGAS*EPPPAP
Trigger: TGGTGCTGGGGGAGGCTCCCAGCTAGCACCTTGCTG...TAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR CCA 90 bp TCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAGGGCCATGCTCGGCGAGGCTGTaGTGGGATCTGGTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: SFCHLIPSHCQCKTFLGPCSARL*WDLVEA
Trigger: GGCCTCTACCAGATCCCACCACAGCCTCGCCGAGCA...TGGCCCTAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416649.6
CDS-3UTR TCA 90 bp CCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCAGGTCATCAGAGGCTaGGGTTGTACCAGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: PSLKFYFRWGSCSGSFCHQVIRG*GCTSCH
Trigger: GTGGCAACTGGTACAACCTCAGCCTCTGATGACCTG...GTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR TCA 90 bp TTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTACCGAGGCCTGGATGTaGCCCACTATGATGCCGATG +
Preference number: 4 (lower is better)
Translates to: LAPLLSSTSGGGPAQVPSTEAWM*PTMMPM
Trigger: CATCGGCATCATAGTGGGTCACATCCAGGCCTCGGT...AGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR TCA 90 bp TCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCCTAGGTAGCAGCGGATaGCACCCTCATCCTCATATA +
Preference number: 4 (lower is better)
Translates to: STSGGGPAQVPSATLSPPLGSSG*HPHPHI
Trigger: TATATGAGGATGAGGGTGTCATCCGCTGCTACCTAG...GGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR TCA 90 bp TCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTCAGCTTGTCTCCTGGTaGCAGGTCTGCGATGTGCCG +
Preference number: 4 (lower is better)
Translates to: SLKFYFRWGSCSGSFCHLQLVSW*QVCDVP
Trigger: CGGCACATCGCAGACCTGTCACCAGGAGACAAGCTG...AAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR TCA 90 bp CTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCCATCATCCTGTTCCATaGGGCTCCAGGATGGATGGC +
Preference number: 4 (lower is better)
Translates to: LGPSLKFYFRWGSCSGSFHHPVP*GSRMDG
Trigger: GCCATCCATCCTGGAGCCTCATGGAACAGGATGATG...GAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp TTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGTTCCAGGCTGTACTTaGCACCATCCCGCATGGCTG +
Preference number: 4 (lower is better)
Translates to: LAPLLSSTSGGGPAQVPSVPGCT*HHPAWL
Trigger: CAGCCATGCGGGATGGTGGCAAGTACAGCCTGGAAC...AGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp CTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTAGAACTGGGTAGGCTGTaGTGCCGCTCGAACCCAGCT +
Preference number: 4 (lower is better)
Translates to: LLSSTSGGGPAQVPSATLELGRL*CRSNPA
Trigger: AGCTGGGTTCGAGCGGCAGCACAGCCTACCCAGTTC...TAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp TGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAGGGCCAAGCCCCCCATCTGCCCCAAGATaGTCAGAACTGGGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: CHLIPSHCQCKTFLGPSPPSAPR*SELGRL
Trigger: CAGCCTACCCAGTTCTGAGCATCTTGGGGCAGATGG...GGGGCTTGGCCCTAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp TCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTCCGGCGAGCCAGGTCTaGAAAGATCACCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SLKFYFRWGSCSGSFCHLPASQV*KDHLQP
Trigger: AGGCTGGAGGTGATCTTTGCAGACCTGGCTCGCCGG...AAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp ACAGCTCCCAGACCATGGTCCCCAATCCTACACTTGGCCCCTCTCTTAAGTTCTTGGCTGCATCCAGGCTaGACATGGCGCCAAAGCACT +
Preference number: 4 (lower is better)
Translates to: TAPRPWSPILHLAPLLSSWLHPG*TWRQST
Trigger: AGTGCTTTGGCGCCATGTGCAGCCTGGATGCAGCCA...AGAACTTAAGAGAGGGGCCAAGTGTAGGATTGGGGACCATGGTCTGGGAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp CAGGATGGATGGCCTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAACAGGTGCTCATAGTGTaGATAGGGCACTGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: QDGWPVSKIPLSKQQLGQQVLIV*IGHCLS
Trigger: GGAGAGGCAGTGCCCTATGCACACTATGAGCACCTG...TTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAGGCCATCCATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp ACAGCTCCCAGACCATGGTCCCCAATCCTACACTTGGCCCCTCTCTTAAGTTCTGGGAGAGGTACTCCATaGGCAGCTTGTCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: TAPRPWSPILHLAPLLSSGRGTP*AACLLV
Trigger: CACCAGGAGACAAGCTGCGCATGGAGTACCTCTCCC...AGAACTTAAGAGAGGGGCCAAGTGTAGGATTGGGGACCATGGTCTGGGAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp CAGGATGGATGGCCTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAATCTCTCGGACAATCATaGGGTCCATCTGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: QDGWPVSKIPLSKQQLGQSLGQS*GPSGTG
Trigger: CCCAGTGCCAGATGGACCGCATGATTGTCCGAGAGA...TTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAGGCCATCCATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGGTGGATCAGCTTCTaGAGGACTCCACGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LGPSLKFYFRWGSCSGSFWWISF*RTPRCS
Trigger: GGAACAGCGTGGAGTCCTCCAGAAGCTGATCCACCA...GAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp GAGATTCGGTCATTGGCTTTCTCAGTGCCATCATCCTGTTCCATGAGGCTCCAGTGCTCGGCGAGGCTGTaGTGGGATCTGGGAAGATGG +
Preference number: 4 (lower is better)
Translates to: EIRSLAFSVPSSCSMRLQCSARL*WDLGRW
Trigger: CCATCTTCCCAGATCCCACCACAGCCTCGCCGAGCA...CTGGAGCCTCATGGAACAGGATGATGGCACTGAGAAAGCCAATGACCGAATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294129.7
CDS-3UTR CCA 90 bp CTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTGAGGGCATGGTGTTGTaGCCACCACTCCCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: LRFLLPPYPLPLSVQNILEGMVL*PPLPEA
Trigger: GGCCTCTGGGAGTGGTGGCCACAACACCATGCCCTC...AAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp GAGATTCGGTCATTGGCTTTCTCAGTGCCATCATCCTGTTCCATGAGGCTCCAGGTGTGGGTGAGCAGCTaGAGCCTGGTTCAGATGGGC +
Preference number: 4 (lower is better)
Translates to: EIRSLAFSVPSSCSMRLQVWVSS*SLVQMG
Trigger: GCCCATCTGAACCAGGCTCCAGCTGCTCACCCACAC...CTGGAGCCTCATGGAACAGGATGATGGCACTGAGAAAGCCAATGACCGAATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACATTCTGGTCAGCAGCTaGCAGGTGCAGGTTGAGAGC +
Preference number: 4 (lower is better)
Translates to: PSLKFYFRWGSCSGSFCHILVSS*QVQVES
Trigger: GCTCTCAACCTGCACCTGCCAGCTGCTGACCAGAAT...GTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR CCA 90 bp CAGGATGGATGGCCTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAAATTCTGGTCAGCAGCTaGCAGGTGCAGGTTGAGAGC +
Preference number: 4 (lower is better)
Translates to: QDGWPVSKIPLSKQQLGQILVSS*QVQVES
Trigger: GCTCTCAACCTGCACCTGCCAGCTGCTGACCAGAAT...TTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAGGCCATCCATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp AAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCGCCATGATGACATTCTaGTCAGCAGCTGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: KFYFRWGSCSGSFCHLIPAMMTF*SAAGRC
Trigger: GCACCTGCCAGCTGCTGACCAGAATGTCATCATGGC...GGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR CCA 90 bp GCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCAAGTTCTACTTCAGGTaGGGGTCCTGCTCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: APLLSSTSGGGPAQVPSAKFYFR*GSCSGS
Trigger: GGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTT...GGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR TCA 90 bp CTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCAGACCATGGCCAGGATaGGGGCAGAGTAACAGAGTT +
Preference number: 4 (lower is better)
Translates to: LGPSLKFYFRWGSCSGSFRPWPG*GQSNRV
Trigger: AACTCTGTTACTCTGCCCTCATCCTGGCCATGGTCT...GAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR TCA 90 bp CTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTACTGGCAGGTGCAGGTTaGGAGCCAGAAGCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: LLSSTSGGGPAQVPSATLLAGAG*EPEAGS
Trigger: TGAACCTGCTTCTGGCTCTCAACCTGCACCTGCCAG...TAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR TCA 90 bp TCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCTCTCGGAGAAGATCTTaGCATTGGCGTGTTTGCTCA +
Preference number: 4 (lower is better)
Translates to: STSGGGPAQVPSATLSPPSRRRS*HWRVCS
Trigger: TGAGCAAACACGCCAATGTCAAGATCTTCTCCGAGA...GGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR TCA 90 bp CCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCGCTGTGGCTCATGTTTaGAGATGCGCACAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: PLLSSTSGGGPAQVPSATAVAHV*RCAQGH
Trigger: ATGACCCTGTGCGCATCTTCAAACATGAGCCACAGC...GGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR TCA 90 bp CTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTACGTCCTGCAGGAACTTaGGGACAGAGTGTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: LLSSTSGGGPAQVPSATLRPAGT*GQSVVA
Trigger: AGCCACCACACTCTGTCCTCAAGTTCCTGCAGGACG...TAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR TCA 90 bp AATCCTACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCACATCTGGCACTGGGGTaGGGTCTCCTCCTCATTCAG +
Preference number: 4 (lower is better)
Translates to: NPTLGPSLKFYFRWGSCSHLALG*GLLLIQ
Trigger: CTGAATGAGGAGGAGACCTCACCCCAGTGCCAGATG...TGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGTAGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR TCA 90 bp TCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAGAGTCCCCTGCACACTaGCTGGAGCTGCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: SGSFCHLIPSHCQCKTFLESPAH*LELQGR
Trigger: CCTTCCCTGCAGCTCCAGTCAGTGTGCAGGGGACTC...TAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR GCA 90 bp CCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCGTAGAGGCCTCCATCTaGCCCAAGATGCTCAGAACT +
Preference number: 4 (lower is better)
Translates to: PLLSSTSGGGPAQVPSATVEASI*PKMLRT
Trigger: AGTTCTGAGCATCTTGGGGCAGATGGAGGCCTCTAC...GGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp CTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTACATATAGTGCCCAACTaGGCTGCTGGGCGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: LLSSTSGGGPAQVPSATLHIVPN*AAGRRP
Trigger: AGGACGACGCCCAGCAGCGCAGTTGGGCACTATATG...TAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp AAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCCTGCCAAACACGTCCTaGAGGAACTTGAGGACAGAG +
Preference number: 4 (lower is better)
Translates to: KFYFRWGSCSGSFCHLIPLPNTS*RNLRTE
Trigger: CTCTGTCCTCAAGTTCCTGCAGGACGTGTTTGGCAG...GGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR GCA 90 bp CAGGAATTCCTTGCACATCTCTCGGACAATCATGCGGTCCATCTGGCACTGGGGCTGCCAAACACGTCCTaGAGGAACTTGAGGACAGAG +
Preference number: 4 (lower is better)
Translates to: QEFLAHLSDNHAVHLALGLPNTS*RNLRTE
Trigger: CTCTGTCCTCAAGTTCCTGCAGGACGTGTTTGGCAG...CCCCAGTGCCAGATGGACCGCATGATTGTCCGAGAGATGTGCAAGGAATTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413374.1
CDS-3UTR GCA 90 bp ACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCGTGCGGACTATAGCATaGATCAGGGAGAGGTACTCC +
Preference number: 4 (lower is better)
Translates to: TLGPSLKFYFRWGSCSGSVRTIA*IRERYS
Trigger: GGAGTACCTCTCCCTGATGCATGCTATAGTCCGCAC...GGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR GCA 90 bp TTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTCCTCCTCATTCAGGATaGGTCGCAGTATGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LAPLLSSTSGGGPAQVPSPPHSG*VAVWPA
Trigger: TGCAGGCCATACTGCGACGCATCCTGAATGAGGAGG...AGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR GCA 90 bp ATCCTACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGTCTCTCGGACAATCATaGGGTCCATCTGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: ILHLAPLLSSTSGGGPAQSLGQS*GPSGTG
Trigger: CCCAGTGCCAGATGGACCGCATGATTGTCCGAGAGA...CTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGTAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR GCA 90 bp CTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTGGGAGAGGTACTCCATaGGCAGCTCCAGGCACCTTG +
Preference number: 4 (lower is better)
Translates to: LRFLLPPYPLPLSVQNILGRGTP*AAPGTL
Trigger: CAAGGTGCCTGGAGCTGCGCATGGAGTACCTCTCCC...AAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413374.1
CDS-3UTR CCA 90 bp CTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTCCCCATTGGGCTGCCTaGCTGCAGCAGCATCCAAGT +
Preference number: 4 (lower is better)
Translates to: LRFLLPPYPLPLSVQNILPHWAA*LQQHPS
Trigger: ACTTGGATGCTGCTGCAGCCAGGCAGCCCAATGGGG...AAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp GAGATTCGGTCATTGGCTTTCTCAGTGCCATCATCCTGTTCCATGAGGCTCCAGCAGATGGGCTGGAGCTaGTATAGAGCGTGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: EIRSLAFSVPSSCSMRLQQMGWS*YRACPG
Trigger: CCCTGGACACGCTCTATACCAGCTCCAGCCCATCTG...CTGGAGCCTCATGGAACAGGATGATGGCACTGAGAAAGCCAATGACCGAATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp TGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAGGGCCAAGCCCCACCCGGCATAATTCGTaGCTCAGGCCAGTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: CHLIPSHCQCKTFLGPSPTRHNS*LRPVFL
Trigger: GAGAAACACTGGCCTGAGCCACGAATTATGCCGGGT...GGGGCTTGGCCCTAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTAGCACTGCCTCTCCCATaGAGAAGACCATGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LLSSTSGGGPAQVPSATLALPLP*RRPWPG
Trigger: TCCTGGCCATGGTCTTCTCCATGGGAGAGGCAGTGC...TAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp TGTGCGGGTGGAGGGGAGGACATGAGCAGCACTCACTGCAAAGCTAAGGCAAAGAGAGTGTGGTGGCTGTaGCTCATGTTTGAAGATGCG +
Preference number: 4 (lower is better)
Translates to: CAGGGEDMSSTHCKAKAKRVWWL*LMFEDA
Trigger: CGCATCTTCAAACATGAGCCACAGCCACCACACTCT...CTTTGCCTTAGCTTTGCAGTGAGTGCTGCTCATGTCCTCCCCTCCACCCGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp GAGATTCGGTCATTGGCTTTCTCAGTGCCATCATCCTGTTCCATGAGGCTCCAGAGAAGATGGCAGCTGTaGCCGGGCTGCCAAACACGT +
Preference number: 4 (lower is better)
Translates to: EIRSLAFSVPSSCSMRLQRRWQL*PGCQTR
Trigger: ACGTGTTTGGCAGCCCGGCCACAGCTGCCATCTTCT...CTGGAGCCTCATGGAACAGGATGATGGCACTGAGAAAGCCAATGACCGAATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp AATCCTACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAATCATGCGGTCCATCTaGCACTGGGGTGAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: NPTLGPSLKFYFRWGSCSIMRSI*HWGEVS
Trigger: GGAGACCTCACCCCAGTGCCAGATGGACCGCATGAT...TGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGTAGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR CCA 90 bp TCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTACTCACCCCAGGGGCATaGCTTGCTGAGGCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: SGSFCHLIPSHCQCKTFLLTPGA*LAEAQD
Trigger: ATCCTGGGCCTCAGCAAGCCATGCCCCTGGGGTGAG...TAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTTCAAAGCAGCAGCTTaGCCAAGGCCTCTGGGGGTA +
Preference number: 4 (lower is better)
Translates to: PAQVPSATLSPPTVSAKHFKAAA*PRPLGV
Trigger: TACCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAA...ATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp GAGATTCGGTCATTGGCTTTCTCAGTGCCATCATCCTGTTCCATGAGGCTCCAGAGGCTCCAGGATGGATaGCCTGTCTCCAAGATCCCG +
Preference number: 4 (lower is better)
Translates to: EIRSLAFSVPSSCSMRLQRLQDG*PVSKIP
Trigger: CGGGATCTTGGAGACAGGCCATCCATCCTGGAGCCT...CTGGAGCCTCATGGAACAGGATGATGGCACTGAGAAAGCCAATGACCGAATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp AATCCTACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAAGGCTCCAGGATGGATaGCCTGTCTCCAAGATCCCG +
Preference number: 4 (lower is better)
Translates to: NPTLGPSLKFYFRWGSCSRLQDG*PVSKIP
Trigger: CGGGATCTTGGAGACAGGCCATCCATCCTGGAGCCT...TGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGTAGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCCATGAGGCTCCAGGATaGATGGCCTGTCTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: LGPSLKFYFRWGSCSGSFHEAPG*MACLQD
Trigger: ATCTTGGAGACAGGCCATCCATCCTGGAGCCTCATG...GAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCCATGAGGCTCCAGGATaGATGGCCTGTCTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: PLLSSTSGGGPAQVPSATHEAPG*MACLQD
Trigger: ATCTTGGAGACAGGCCATCCATCCTGGAGCCTCATG...GGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR TCA 90 bp AGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAGGGAGCAGCAGCCGCAGTaGTGCTCGGTGTTCCATTTG +
Preference number: 4 (lower is better)
Translates to: RFLLPPYPLPLSVQNILREQQPQ*CSVFHL
Trigger: CAAATGGAACACCGAGCATCACTGCGGCTGCTGCTC...CCTAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp CTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTATTGGGCTGCCTGGCTaGAGCAGCATCCAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: LRFLLPPYPLPLSVQNILIGLPG*SSIQVV
Trigger: CACCACTTGGATGCTGCTGCAGCCAGGCAGCCCAAT...AAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp TCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAGAACTGGGTAGGCTGTaGTGCCGCTCGAACCCAGCT +
Preference number: 4 (lower is better)
Translates to: SGSFCHLIPSHCQCKTFLELGRL*CRSNPA
Trigger: AGCTGGGTTCGAGCGGCAGCACAGCCTACCCAGTTC...TAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp CCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATGTGCGGACTATAGCATaGATCAGGGAGAGGTACTCC +
Preference number: 4 (lower is better)
Translates to: PAQVPSATLSPPTVSAKHVRTIA*IRERYS
Trigger: GGAGTACCTCTCCCTGATGCATGCTATAGTCCGCAC...ATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR GCA 90 bp AAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCCCCTCCCACTGTCAGTaGAAAACATTCTTAGGGCCA +
Preference number: 4 (lower is better)
Translates to: KFYFRWGSCSGSFCHLIPPSHCQ*KTFLGP
Trigger: TGGCCCTAAGAATGTTTTGCACTGACAGTGGGAGGG...GGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTT
53% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR CCA 90 bp CCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATGCAGCATCCAAGTGGTaGTCACTGGTTGATGAGGTC +
Preference number: 4 (lower is better)
Translates to: PAQVPSATLSPPTVSAKHAASKW*SLVDEV
Trigger: GACCTCATCAACCAGTGACCACCACTTGGATGCTGC...ATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp TCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAGGGCCAGGAGCCTGGTTCAGATaGGCTGGAGCTGGTATAGAG +
Preference number: 4 (lower is better)
Translates to: SFCHLIPSHCQCKTFLGPGAWFR*AGAGIE
Trigger: CTCTATACCAGCTCCAGCCCATCTGAACCAGGCTCC...TGGCCCTAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp ACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCCTTGAGGACAGAGTGTaGTGGCTGTGGCTCATGTTT +
Preference number: 4 (lower is better)
Translates to: TLGPSLKFYFRWGSCSGSLEDRV*WLWLMF
Trigger: AAACATGAGCCACAGCCACCACACTCTGTCCTCAAG...GGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR GCA 90 bp TCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTGTGCGGACTATAGCATaGATCAGGGAGAGGTACTCC +
Preference number: 4 (lower is better)
Translates to: SLKFYFRWGSCSGSFCHLVRTIA*IRERYS
Trigger: GGAGTACCTCTCCCTGATGCATGCTATAGTCCGCAC...AAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR GCA 90 bp CTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTCCTCCTCATTCAGGATaGGTCGCAGTATGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LRFLLPPYPLPLSVQNILPPHSG*VAVWPA
Trigger: TGCAGGCCATACTGCGACGCATCCTGAATGAGGAGG...AAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR GCA 90 bp AGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAGGCTTGCATATTCCCCCTaGCCCAGAACAGCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: RFLLPPYPLPLSVQNILRLAYSP*PRTAPR
Trigger: TCTGGGAGCTGTTCTGGGGCAGGGGGAATATGCAAG...CCTAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp TCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAGGGCCACTGGTTCAGATGGGCTaGAGCTGGTATAGAGCGTGT +
Preference number: 4 (lower is better)
Translates to: SFCHLIPSHCQCKTFLGPLVQMG*SWYRAC
Trigger: ACACGCTCTATACCAGCTCCAGCCCATCTGAACCAG...TGGCCCTAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTGCCATGATGACATTCTaGTCAGCAGCTGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LRFLLPPYPLPLSVQNILAMMTF*SAAGRC
Trigger: GCACCTGCCAGCTGCTGACCAGAATGTCATCATGGC...AAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR CCA 90 bp CCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATAGAGTGTGGTGGCTGTaGCTCATGTTTGAAGATGCG +
Preference number: 4 (lower is better)
Translates to: PAQVPSATLSPPTVSAKHRVWWL*LMFEDA
Trigger: CGCATCTTCAAACATGAGCCACAGCCACCACACTCT...ATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR CCA 90 bp CTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTTTCAAAGCAGCAGCTTaGCCAAGGCCTCTGGGGGTA +
Preference number: 4 (lower is better)
Translates to: LRFLLPPYPLPLSVQNILFKAAA*PRPLGV
Trigger: TACCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAA...AAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR TCA 90 bp CTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAGACCATGGCCAGGATaGGGGCAGAGTAACAGAGTT +
Preference number: 4 (lower is better)
Translates to: LRFLLPPYPLPLSVQNILRPWPG*GQSNRV
Trigger: AACTCTGTTACTCTGCCCTCATCCTGGCCATGGTCT...AAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR TCA 90 bp AGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAGGGCTGTGGCTCATGTTTaGAGATGCGCACAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: RFLLPPYPLPLSVQNILRAVAHV*RCAQGH
Trigger: ATGACCCTGTGCGCATCTTCAAACATGAGCCACAGC...CCTAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR GCA 90 bp AGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAGGGACAGGTCTGCGATGTaGCGCACAGTGATGTCAATG +
Preference number: 4 (lower is better)
Translates to: RFLLPPYPLPLSVQNILRDRSAM*RTVMSM
Trigger: CATTGACATCACTGTGCGGCACATCGCAGACCTGTC...CCTAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR GCA 90 bp TCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTACCTCCTCATTCAGGATaGGTCGCAGTATGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: SGSFCHLIPSHCQCKTFLPPHSG*VAVWPA
Trigger: TGCAGGCCATACTGCGACGCATCCTGAATGAGGAGG...TAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR GCA 90 bp ACAGCTCCCAGACCATGGTCCCCAATCCTACACTTGGCCCCTCTCTTAAGTTCTGCACCAGGAATTCCTTaGACATCTCTCGGACAATCA +
Preference number: 4 (lower is better)
Translates to: TAPRPWSPILHLAPLLSSAPGIP*TSLGQS
Trigger: TGATTGTCCGAGAGATGTGCAAGGAATTCCTGGTGC...AGAACTTAAGAGAGGGGCCAAGTGTAGGATTGGGGACCATGGTCTGGGAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CAGACCATGGTCCCCAATCCTACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGCTTGAGGACAGAGTGTaGTGGCTGTGGCTCATGTTT +
Preference number: 4 (lower is better)
Translates to: QTMVPNPTLGPSLKFYFRLEDRV*WLWLMF
Trigger: AAACATGAGCCACAGCCACCACACTCTGTCCTCAAG...CCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGTAGGATTGGGGACCATGGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp AATCCTACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCACTTGAGGACAGAGTGTaGTGGCTGTGGCTCATGTTT +
Preference number: 4 (lower is better)
Translates to: NPTLGPSLKFYFRWGSCSLEDRV*WLWLMF
Trigger: AAACATGAGCCACAGCCACCACACTCTGTCCTCAAG...TGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGTAGGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR CCA 90 bp CTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAAGTTCTACTTCAGGTaGGGGTCCTGCTCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: LRFLLPPYPLPLSVQNILKFYFR*GSCSGS
Trigger: GGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTT...AAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR CCA 90 bp AGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAGGAAGTTCTACTTCAGGTaGGGGTCCTGCTCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: RFLLPPYPLPLSVQNILRKFYFR*GSCSGS
Trigger: GGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTT...CCTAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR TCA 90 bp TCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTATACAGGCAGCACGGATaGCACAAGCGTGGAGATGAT +
Preference number: 4 (lower is better)
Translates to: SGSFCHLIPSHCQCKTFLYRQHG*HKRGDD
Trigger: ATCATCTCCACGCTTGTGTCATCCGTGCTGCCTGTA...TAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp ATCCTACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGCAAACTTCAGGGTCTaGATCAGTCAGAATATGCAG +
Preference number: 4 (lower is better)
Translates to: ILHLAPLLSSTSGGGPAQANFRV*ISQNMQ
Trigger: CTGCATATTCTGACTGATGCAGACCCTGAAGTTTGC...CTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGTAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp TCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTGCACCAGGAATTCCTTaGACATCTCTCGGACAATCA +
Preference number: 4 (lower is better)
Translates to: SLKFYFRWGSCSGSFCHLAPGIP*TSLGQS
Trigger: TGATTGTCCGAGAGATGTGCAAGGAATTCCTGGTGC...AAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR GCA 90 bp CTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCATGAGCAGCACTCACTaGAAAGCTAAGGCAAAGAAT +
Preference number: 4 (lower is better)
Translates to: LGPSLKFYFRWGSCSGSFMSSTH*KAKAKN
Trigger: ATTCTTTGCCTTAGCTTTGCAGTGAGTGCTGCTCAT...GAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp TCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAGCAGCAGCATCCAAGTaGTGGTCACTGGTTGATGAG +
Preference number: 4 (lower is better)
Translates to: SGSFCHLIPSHCQCKTFLAAASK*WSLVDE
Trigger: CTCATCAACCAGTGACCACCACTTGGATGCTGCTGC...TAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CCA 90 bp CTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAGAGTGTGGTGGCTGTaGCTCATGTTTGAAGATGCG +
Preference number: 4 (lower is better)
Translates to: LRFLLPPYPLPLSVQNILRVWWL*LMFEDA
Trigger: CGCATCTTCAAACATGAGCCACAGCCACCACACTCT...AAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR TCA 90 bp AGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAGGTCTCGGAGAAGATCTTaGCATTGGCGTGTTTGCTCA +
Preference number: 4 (lower is better)
Translates to: RFLLPPYPLPLSVQNILRSRRRS*HWRVCS
Trigger: TGAGCAAACACGCCAATGTCAAGATCTTCTCCGAGA...CCTAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR GCA 90 bp AGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAGGGCACCAGGAATTCCTTaGACATCTCTCGGACAATCA +
Preference number: 4 (lower is better)
Translates to: RFLLPPYPLPLSVQNILRAPGIP*TSLGQS
Trigger: TGATTGTCCGAGAGATGTGCAAGGAATTCCTGGTGC...CCTAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR GCA 90 bp TCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTACCCTCCCACTGTCAGTaGAAAACATTCTTAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SGSFCHLIPSHCQCKTFLPSHCQ*KTFLGP
Trigger: TGGCCCTAAGAATGTTTTGCACTGACAGTGGGAGGG...TAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR GCA 90 bp CCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATATGAGCAGCACTCACTaGAAAGCTAAGGCAAAGAAT +
Preference number: 4 (lower is better)
Translates to: PAQVPSATLSPPTVSAKHMSSTH*KAKAKN
Trigger: ATTCTTTGCCTTAGCTTTGCAGTGAGTGCTGCTCAT...ATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp CTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTGCAAACTTCAGGGTCTaGATCAGTCAGAATATGCAG +
Preference number: 4 (lower is better)
Translates to: LRFLLPPYPLPLSVQNILANFRV*ISQNMQ
Trigger: CTGCATATTCTGACTGATGCAGACCCTGAAGTTTGC...AAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp AGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAGGCGAACTCGTTTCTCTTaGACATTTTCTTGCAAACTT +
Preference number: 4 (lower is better)
Translates to: RFLLPPYPLPLSVQNILRRTRFS*TFSCKL
Trigger: AAGTTTGCAAGAAAATGTGCAAGAGAAACGAGTTCG...CCTAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR GCA 90 bp TCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTACGAACTCGTTTCTCTTaGACATTTTCTTGCAAACTT +
Preference number: 4 (lower is better)
Translates to: SGSFCHLIPSHCQCKTFLRTRFS*TFSCKL
Trigger: AAGTTTGCAAGAAAATGTGCAAGAGAAACGAGTTCG...TAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
3UTR CAA 72 bp CAGTCTACATTTTTACAGAGAAAAGAGATTCGGTCATaGGCTTTCTCAGTGCCATCATCCTGTTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: QSTFLQRKEIRS*AFSVPSSCSMR
Trigger: CCTCATGGAACAGGATGATGGCACTGAGAAAGCCAATGACCGAATCTCTTTTCTCTGTAAAAATGTAGACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS GCA 90 bp GCAGGCGGCGCAGGTAGGCTGGCGGCACGTAGCCCGTCTCACCACTaGGCGCCCGCGCGGCCAGCCACCAGTGCGCGCTGCTTCGCTCTA +
Preference number: 5 (lower is better)
Translates to: AGGAGRLAARSPSHH*APARPATSARCFAL
Trigger: TAGAGCGAAGCAGCGCGCACTGGTGGCTGGCCGCGCGGGCGCGCAGTGGTGAGACGGGCTACGTGCCGCCAGCCTACCTGCGCCGCCTGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294129.7
ENST00000416649.6
ENST00000439518.5
ENST00000454134.1
CDS GCA 90 bp CCGTCTCACCACTGCGCGCCCGCGCGGCCAGCCACCAGTGCGCGCTaGTTCGCTCTAGCACCAGGAAGGTCTCGCCCGCGGCGAACGCCA +
Preference number: 5 (lower is better)
Translates to: PSHHCAPARPATSAR*FALAPGRSRPRRTP
Trigger: TGGCGTTCGCCGCGGGCGAGACCTTCCTGGTGCTAGAGCGAAGCAGCGCGCACTGGTGGCTGGCCGCGCGGGCGCGCAGTGGTGAGACGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294129.7
ENST00000416649.6
ENST00000439518.5
ENST00000454134.1
CDS-3UTR CAA 90 bp AGAGGCCATCAGGGCCTCGCGGTCTCGGCGCTTCACTGGTGGGGGCGGTGTGGTGGGAGGGGGCTGGACTaGGGACACGGTGGTGTGGGT +
Preference number: 5 (lower is better)
Translates to: RGHQGLAVSALHWWGRCGGRGLD*GHGGVG
Trigger: ACCCACACCACCGTGTCCCAAGTCCAGCCCCCTCCC...ACCACACCGCCCCCACCAGTGAAGCGCCGAGACCGCGAGGCCCTGATGGCCTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS GCA 90 bp CTGCTCCAGGCCCTCCCGGTGAAAGCGCGCTCCGCTCGTAGCGGGTaGGCCCCTACCGCCCTGGGGCAGTGGGTCCCATCTACTAATTGC +
Preference number: 5 (lower is better)
Translates to: LLQALPVKARSARSG*APTALGQWVPSTNC
Trigger: GCAATTAGTAGATGGGACCCACTGCCCCAGGGCGGTAGGGGCGCACCCGCTACGAGCGGAGCGCGCTTTCACCGGGAGGGCCTGGAGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426678.1
CDS-3UTR CAA 90 bp CAGAACTGGGTAGGCTGTGCTGCCGCTCGAACCCAGCTCGACACACCCCATTGGGCGAACGCCAGCGCGTaGGGCTCCGCCGAGCGGAAC +
Preference number: 5 (lower is better)
Translates to: QNWVGCAAARTQLDTPHWANASA*GSAERN
Trigger: GTTCCGCTCGGCGGAGCCCAACGCGCTGGCGTTCGC...CCAATGGGGTGTGTCGAGCTGGGTTCGAGCGGCAGCACAGCCTACCCAGTTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR CAA 90 bp CCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATGTGCGGGTGGAGGCTCGACACACCCCATaGGGCTGCCTGGCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: PRPLGVGVKGSDPHVRVEARHTP*GCLAAA
Trigger: TGCTGCAGCCAGGCAGCCCAATGGGGTGTGTCGAGC...CTCCACCCGCACATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS GCA 90 bp TGCCCAACTGCGCTGCTGGGCGTCGTCCTTCCGGCGAGCCAGGTCTaGAAAGATCACCTCCAGCCTCTGCTGGTCGTGGCAGACCTGCCC +
Preference number: 5 (lower is better)
Translates to: CPTALLGVVLPASQV*KDHLQPLLVVADLP
Trigger: GGGCAGGTCTGCCACGACCAGCAGAGGCTGGAGGTGATCTTTGCAGACCTGGCTCGCCGGAAGGACGACGCCCAGCAGCGCAGTTGGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000415281.1
ENST00000416649.6
CDS CCA 90 bp GCGCGCTCCGCTCGTAGCGGGTGCGCCCCTACCGCCCTGGGGCAGTaGGTCCCATCTACTAATTGCAAGGACGGCGACCTCGAAAGGATG +
Preference number: 5 (lower is better)
Translates to: ARSARSGCAPTALGQ*VPSTNCKDGDLERM
Trigger: CATCCTTTCGAGGTCGCCGTCCTTGCAATTAGTAGATGGGACCCACTGCCCCAGGGCGGTAGGGGCGCACCCGCTACGAGCGGAGCGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426678.1
ENST00000453349.5
CDS-3UTR CAA 90 bp GCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGCGAACGCCAGCGCGTaGGGCTCCGCCGAGCGGAAC +
Preference number: 5 (lower is better)
Translates to: AFKAAAWPRPLGVGVKGSANASA*GSAERN
Trigger: GTTCCGCTCGGCGGAGCCCAACGCGCTGGCGTTCGC...GCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS GCA 90 bp CAGCAGTTAGACCTCCCGGTGAAAGCGCGCTCCGCTCGTAGCGGGTaGGCCCCTACCGCCCTGGGGCAGTGGGTCCCATCTACTAATTGC +
Preference number: 5 (lower is better)
Translates to: QQLDLPVKARSARSG*APTALGQWVPSTNC
Trigger: GCAATTAGTAGATGGGACCCACTGCCCCAGGGCGGTAGGGGCGCACCCGCTACGAGCGGAGCGCGCTTTCACCGGGAGGTCTAACTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453349.5
CDS CCA 90 bp CATCCCGCATGGCTGTGTTGTGTACAGCCTCGATGGCCCGGTCAATaGCCTGGAGGACATCCTGCTCCAGGCCCTGCAGGCGGCGCAGGT +
Preference number: 5 (lower is better)
Translates to: HPAWLCCVQPRWPGQ*PGGHPAPGPAGGAG
Trigger: ACCTGCGCCGCCTGCAGGGCCTGGAGCAGGATGTCCTCCAGGCCATTGACCGGGCCATCGAGGCTGTACACAACACAGCCATGCGGGATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000416649.6
ENST00000439518.5
CDS CCA 90 bp GGCACTGGGGTGAGGTCTCCTCCTCATTCAGGATGCGTCGCAGTATaGCCTGCAGGTCGGGTAGCCGGTGGCGGTGCTGCAGGTAGGGTG +
Preference number: 5 (lower is better)
Translates to: GTGVRSPPHSGCVAV*PAGRVAGGGAAGRV
Trigger: CACCCTACCTGCAGCACCGCCACCGGCTACCCGACCTGCAGGCCATACTGCGACGCATCCTGAATGAGGAGGAGACCTCACCCCAGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR CAA 90 bp GTACAGCCTCGATGGCCCGGTCAATGGCCTGGAGGACATCCTGCTCCAGGCCCTGCTCGACACACCCCATaGGGCTGCCTGGCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: VQPRWPGQWPGGHPAPGPARHTP*GCLAAA
Trigger: TGCTGCAGCCAGGCAGCCCAATGGGGTGTGTCGAGC...AGGGCCTGGAGCAGGATGTCCTCCAGGCCATTGACCGGGCCATCGAGGCTGTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR CAA 90 bp GGCCTCCATCTGCCCCAAGATGCTCAGAACTGGGTAGGCTGTGCTGCCGCTCGACCGGAGGGCATGGTGTaGTGGCCACCACTCCCAGAG +
Preference number: 5 (lower is better)
Translates to: GLHLPQDAQNWVGCAAARPEGMV*WPPLPE
Trigger: CTCTGGGAGTGGTGGCCACAACACCATGCCCTCCGG...TCGAGCGGCAGCACAGCCTACCCAGTTCTGAGCATCTTGGGGCAGATGGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS TCA 90 bp CCACCCTCACCTTGCCCTCTACGAGTGAGAGGAGGACCTGCTCCATaGCTGGTGAGCTGGCCGGCACCGAGGCCTGGATGTGACCCACTA +
Preference number: 5 (lower is better)
Translates to: PPSPCPLRVRGGPAP*LVSWPAPRPGCDPL
Trigger: TAGTGGGTCACATCCAGGCCTCGGTGCCGGCCAGCTCACCAGTCATGGAGCAGGTCCTCCTCTCACTCGTAGAGGGCAAGGTGAGGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439518.5
CDS-3UTR CAA 90 bp GCAGCAGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATTGTTCCAGGCTGTACTaGCCACCATCCCGCATGGCT +
Preference number: 5 (lower is better)
Translates to: AAAWPRPLGVGVKGSDPHCSRLY*PPSRMA
Trigger: AGCCATGCGGGATGGTGGCAAGTACAGCCTGGAACA...ATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAAGCTGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CAA 90 bp CAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGGGGAGGGGGCTGGACTaGGGACACGGTGGTGTGGGT +
Preference number: 5 (lower is better)
Translates to: QDPAFKAAAWPRPLGVGVGRGLD*GHGGVG
Trigger: ACCCACACCACCGTGTCCCAAGTCCAGCCCCCTCCC...CACTCCTACCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS TCA 90 bp ACCTGCTCCATGACTGGTGAGCTGGCCGGCACCGAGGCCTGGATGTaGCCCACTATGATGCCGATGGCCACCCGGCATAATTCGTGGCTC +
Preference number: 5 (lower is better)
Translates to: TCSMTGELAGTEAWM*PTMMPMATRHNSWL
Trigger: GAGCCACGAATTATGCCGGGTGGCCATCGGCATCATAGTGGGTCACATCCAGGCCTCGGTGCCGGCCAGCTCACCAGTCATGGAGCAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294129.7
ENST00000415281.1
ENST00000416649.6
ENST00000439518.5
CDS-3UTR CAA 90 bp CCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATGTGCGGGTGGAGTGCTCGGTGTTCCATTaGGTAATAGGCCACCAAGGC +
Preference number: 5 (lower is better)
Translates to: PRPLGVGVKGSDPHVRVECSVFH*VIGHQG
Trigger: GCCTTGGTGGCCTATTACCAAATGGAACACCGAGCA...CTCCACCCGCACATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CAA 90 bp TTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATGTGCGGGTGGCTGTGGCTCATGTTaGAAGATGCGCACAGGGTCA +
Preference number: 5 (lower is better)
Translates to: LAKASGGRSEGQRPPCAGGCGSC*KMRTGS
Trigger: TGACCCTGTGCGCATCTTCAAACATGAGCCACAGCC...ACCCGCACATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CAA 90 bp TTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATGTGCGGGTTACTCCATGCGCAGCTaGTCTCCTGGTGACAGGTCT +
Preference number: 5 (lower is better)
Translates to: LAKASGGRSEGQRPPCAGYSMRS*SPGDRS
Trigger: AGACCTGTCACCAGGAGACAAGCTGCGCATGGAGTA...ACCCGCACATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS GCA 90 bp GGGTGCGCCCCTACCGCCCTGGGGCAGTGGGTCCCATCTACTAATTaGAAGGACGGCGACCTCGAAAGGATGATCTTGCTGATCCGACAC +
Preference number: 5 (lower is better)
Translates to: GCAPTALGQWVPSTN*KDGDLERMILLIRH
Trigger: GTGTCGGATCAGCAAGATCATCCTTTCGAGGTCGCCGTCCTTGCAATTAGTAGATGGGACCCACTGCCCCAGGGCGGTAGGGGCGCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426678.1
ENST00000453349.5
CDS CCA 90 bp TGTACTTGCCACCATCCCGCATGGCTGTGTTGTGTACAGCCTCGATaGCCCGGTCAATGGCCTGGAGGACATCCTGCTCCAGGCCCTGCA +
Preference number: 5 (lower is better)
Translates to: CTCHHPAWLCCVQPR*PGQWPGGHPAPGPA
Trigger: TGCAGGGCCTGGAGCAGGATGTCCTCCAGGCCATTGACCGGGCCATCGAGGCTGTACACAACACAGCCATGCGGGATGGTGGCAAGTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000416649.6
ENST00000439518.5
CDS CCA 90 bp CAGCGGATGACACCCTCATCCTCATATAGTGCCCAACTGCGCTGCTaGGCGTCGTCCTTCCGGCGAGCCAGGTCTGCAAAGATCACCTCC +
Preference number: 5 (lower is better)
Translates to: QRMTPSSSYSAQLRC*ASSFRRARSAKITS
Trigger: GGAGGTGATCTTTGCAGACCTGGCTCGCCGGAAGGACGACGCCCAGCAGCGCAGTTGGGCACTATATGAGGATGAGGGTGTCATCCGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000415281.1
ENST00000416649.6
CDS CCA 90 bp GTGGTGTCCAAGGGCAGCCCATCCTCGACGATGTTCAGTAGGAACTaGGCGAAAGGCGTGCCCAGGTGCTCCTGCGTGTCTGTCTGCATG +
Preference number: 5 (lower is better)
Translates to: VVSKGSPSSTMFSRN*AKGVPRCSCVSVCM
Trigger: CATGCAGACAGACACGCAGGAGCACCTGGGCACGCCTTTCGCCCAGTTCCTACTGAACATCGTCGAGGATGGGCTGCCCTTGGACACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415281.1
CDS CCA 90 bp GGATCAGCTTCCGGGAGGTCCCACTTCACTCCCCTCAACACTCACTaGAGGACTCCACGCTGTTCCAGGCTGTACTTGCCACCATCCCGC +
Preference number: 5 (lower is better)
Translates to: GSASGRSHFTPLNTH*RTPRCSRLYLPPSR
Trigger: GCGGGATGGTGGCAAGTACAGCCTGGAACAGCGTGGAGTCCTCCAGTGAGTGTTGAGGGGAGTGAAGTGGGACCTCCCGGAAGCTGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426678.1
CDS-3UTR CAA 90 bp CTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCGGGAGGGGGCTGGACTaGGGACACGGTGGTGTGGGT +
Preference number: 5 (lower is better)
Translates to: LGPSLKFYFRWGSCSGSFGRGLD*GHGGVG
Trigger: ACCCACACCACCGTGTCCCAAGTCCAGCCCCCTCCC...GAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CAA 90 bp GCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGCGACCCCCATGTGCGGGTGGACATCAGAGGCTGAGGTaGTACCAGTTGCCACTTCTT +
Preference number: 5 (lower is better)
Translates to: AKASGGRSEGQRPPCAGGHQRLR*YQLPLL
Trigger: AAGAAGTGGCAACTGGTACAACCTCAGCCTCTGATG...TCCACCCGCACATGGGGGTCGCTGCCCTTCACTCCTACCCCCAGAGGCCTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CAA 90 bp CGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGGCCATGCTGAGGTCCTaGCCCTCTACGAGTGAGAGG +
Preference number: 5 (lower is better)
Translates to: RFQSSSLAKASGGRSEGQAMLRS*PSTSER
Trigger: CCTCTCACTCGTAGAGGGCAAGGACCTCAGCATGGC...CTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CAA 90 bp CAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGCAGCTCCAGGCACCTaGTCTCCTGGTGACAGGTCT +
Preference number: 5 (lower is better)
Translates to: QVGVLLRFLLPPYPLPLSAAPGT*SPGDRS
Trigger: AGACCTGTCACCAGGAGACAAGGTGCCTGGAGCTGC...TGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413374.1
CDS TCA 90 bp CGTGTCTGTCTGCATGTCCCTCGCCAGCTCTACAGGCAGCACGGATaGCACAAGCGTGGAGATGATGGCTGCATCCAGGCTGCACATGGC +
Preference number: 5 (lower is better)
Translates to: RVCLHVPRQLYRQHG*HKRGDDGCIQAAHG
Trigger: GCCATGTGCAGCCTGGATGCAGCCATCATCTCCACGCTTGTGTCATCCGTGCTGCCTGTAGAGCTGGCGAGGGACATGCAGACAGACACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294129.7
ENST00000415281.1
ENST00000416649.6
ENST00000470006.1
CDS GCA 90 bp TGCAGGTTGAGAGCCAGAAGCAGGTTCACGCAGAGGTCCGGCAGCTaGTCTGTGGTGTCCAAGGGCAGCCCATCCTCGACGATGTTCAGT +
Preference number: 5 (lower is better)
Translates to: CRLRARSRFTQRSGS*SVVSKGSPSSTMFS
Trigger: ACTGAACATCGTCGAGGATGGGCTGCCCTTGGACACCACAGAGCAGCTGCCGGACCTCTGCGTGAACCTGCTTCTGGCTCTCAACCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000416649.6
ENST00000470006.1
CDS GCA 90 bp CCCTCAACACTCACTGGAGGACTCCACGCTGTTCCAGGCTGTACTTaGCACCATCCCGCATGGCTGTGTTGTGTACAGCCTCGATGGCCC +
Preference number: 5 (lower is better)
Translates to: PSTLTGGLHAVPGCT*HHPAWLCCVQPRWP
Trigger: GGGCCATCGAGGCTGTACACAACACAGCCATGCGGGATGGTGGCAAGTACAGCCTGGAACAGCGTGGAGTCCTCCAGTGAGTGTTGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426678.1
CDS CCA 90 bp GGCCGGGCTGCCAAACACGTCCTGCAGGAACTTGAGGACAGAGTGTaGTGGCTGTGGCTCATGTTTGAAGATGCGCACAGGGTCATCCCC +
Preference number: 5 (lower is better)
Translates to: GRAAKHVLQELEDRV*WLWLMFEDAHRVIP
Trigger: GGGGATGACCCTGTGCGCATCTTCAAACATGAGCCACAGCCACCACACTCTGTCCTCAAGTTCCTGCAGGACGTGTTTGGCAGCCCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
ENST00000470006.1
CDS-3UTR CAA 90 bp AGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAGGGCGAACGCCAGCGCGTaGGGCTCCGCCGAGCGGAAC +
Preference number: 5 (lower is better)
Translates to: RFLLPPYPLPLSVQNILRANASA*GSAERN
Trigger: GTTCCGCTCGGCGGAGCCCAACGCGCTGGCGTTCGC...CCTAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CAA 90 bp ACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCCCGGAGGGCATGGTGTaGTGGCCACCACTCCCAGAG +
Preference number: 5 (lower is better)
Translates to: TLGPSLKFYFRWGSCSGSPEGMV*WPPLPE
Trigger: CTCTGGGAGTGGTGGCCACAACACCATGCCCTCCGG...GGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CAA 90 bp CAGGATGGATGGCCTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAACCGGAGGGCATGGTGTaGTGGCCACCACTCCCAGAG +
Preference number: 5 (lower is better)
Translates to: QDGWPVSKIPLSKQQLGQPEGMV*WPPLPE
Trigger: CTCTGGGAGTGGTGGCCACAACACCATGCCCTCCGG...TTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAGGCCATCCATCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS TCA 90 bp GGTCCCCAGGCTCAGTGTACCCAGGGCTTCCAGGTCATCAGAGGCTaGGGTTGTACCAGTTGCCACTTCTTCTTCTGCAGGGGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: GPQAQCTQGFQVIRG*GCTSCHFFFCRGFR
Trigger: CCTGAACCCCCTGCAGAAGAAGAAGTGGCAACTGGTACAACCTCAGCCTCTGATGACCTGGAAGCCCTGGGTACACTGAGCCTGGGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294129.7
ENST00000415281.1
ENST00000416649.6
ENST00000439518.5
CDS-3UTR CAA 90 bp AGGCTGTACTTGCCACCATCCCGCATGGCTGTGTTGTGTACAGCCTCGATGGCCTGTTCCAGGCTGTACTaGCCACCATCCCGCATGGCT +
Preference number: 5 (lower is better)
Translates to: RLYLPPSRMAVLCTASMACSRLY*PPSRMA
Trigger: AGCCATGCGGGATGGTGGCAAGTACAGCCTGGAACA...GGCCATCGAGGCTGTACACAACACAGCCATGCGGGATGGTGGCAAGTACAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS TCA 90 bp CTTGCACATCTCTCGGACAATCATGCGGTCCATCTGGCACTGGGGTaGGGTCTCCTCCTCATTCAGGATGCGTCGCAGTATGGCCTGCAG +
Preference number: 5 (lower is better)
Translates to: LAHLSDNHAVHLALG*GLLLIQDASQYGLQ
Trigger: CTGCAGGCCATACTGCGACGCATCCTGAATGAGGAGGAGACCTCACCCCAGTGCCAGATGGACCGCATGATTGTCCGAGAGATGTGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR CAA 90 bp CAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCATTGACATTGGCGTGTTaGCTCAGGGCAGCCATGATG +
Preference number: 5 (lower is better)
Translates to: QVGVLLRFLLPPYPLPLSLTLAC*LRAAMM
Trigger: CATCATGGCTGCCCTGAGCAAACACGCCAATGTCAA...TGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR CAA 90 bp CTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTTGACATTGGCGTGTTaGCTCAGGGCAGCCATGATG +
Preference number: 5 (lower is better)
Translates to: LQVGVLLRFLLPPYPLPLLTLAC*LRAAMM
Trigger: CATCATGGCTGCCCTGAGCAAACACGCCAATGTCAA...CAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR CAA 90 bp CAGGATGGATGGCCTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAATGTTCCAGGCTGTACTaGCCACCATCCCGCATGGCT +
Preference number: 5 (lower is better)
Translates to: QDGWPVSKIPLSKQQLGQCSRLY*PPSRMA
Trigger: AGCCATGCGGGATGGTGGCAAGTACAGCCTGGAACA...TTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAGGCCATCCATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CAA 90 bp CGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTGGGGGTAGGAGTGAAGGGCAGGAGAAGATCTTGACATaGGCGTGTTTGCTCAGGGCA +
Preference number: 5 (lower is better)
Translates to: RFQSSSLAKASGGRSEGQEKILT*ACLLRA
Trigger: TGCCCTGAGCAAACACGCCAATGTCAAGATCTTCTC...CTGCCCTTCACTCCTACCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CAA 90 bp TGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAGGGCCAAGCCCCACGTCCTGCAGGAACTaGAGGACAGAGTGTGGTGGC +
Preference number: 5 (lower is better)
Translates to: CHLIPSHCQCKTFLGPSPTSCRN*RTECGG
Trigger: GCCACCACACTCTGTCCTCAAGTTCCTGCAGGACGT...GGGGCTTGGCCCTAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR CAA 90 bp CTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCACGTCCTGCAGGAACTaGAGGACAGAGTGTGGTGGC +
Preference number: 5 (lower is better)
Translates to: LGPSLKFYFRWGSCSGSFTSCRN*RTECGG
Trigger: GCCACCACACTCTGTCCTCAAGTTCCTGCAGGACGT...GAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR CAA 90 bp CAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCATCCCCAATCCTACACTaGGCCCCTCTCTTAAGTTCT +
Preference number: 5 (lower is better)
Translates to: QVGVLLRFLLPPYPLPLSSPILH*APLLSS
Trigger: AGAACTTAAGAGAGGGGCCAAGTGTAGGATTGGGGA...TGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS TCA 90 bp CTGCATCAGTCAGAATATGCAGCAGCTCCTCTAGGTAGCAGCGGATaGCACCCTCATCCTCATATAGTGCCCAACTGCGCTGCTGGGCGT +
Preference number: 5 (lower is better)
Translates to: LHQSEYAAAPLGSSG*HPHPHIVPNCAAGR
Trigger: ACGCCCAGCAGCGCAGTTGGGCACTATATGAGGATGAGGGTGTCATCCGCTGCTACCTAGAGGAGCTGCTGCATATTCTGACTGATGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000415281.1
ENST00000416649.6
CDS CCA 90 bp GCCAAACACGTCCTGCAGGAACTTGAGGACAGAGTGTGGTGGCTGTaGCTCATGTTTGAAGATGCGCACAGGGTCATCCCCTCTGTTCAG +
Preference number: 5 (lower is better)
Translates to: AKHVLQELEDRVWWL*LMFEDAHRVIPSVQ
Trigger: CTGAACAGAGGGGATGACCCTGTGCGCATCTTCAAACATGAGCCACAGCCACCACACTCTGTCCTCAAGTTCCTGCAGGACGTGTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
ENST00000470006.1
CDS CCA 90 bp AATTCCTTGCACATCTCTCGGACAATCATGCGGTCCATCTGGCACTaGGGTGAGGTCTCCTCCTCATTCAGGATGCGTCGCAGTATGGCC +
Preference number: 5 (lower is better)
Translates to: NSLHISRTIMRSIWH*GEVSSSFRMRRSMA
Trigger: GGCCATACTGCGACGCATCCTGAATGAGGAGGAGACCTCACCCCAGTGCCAGATGGACCGCATGATTGTCCGAGAGATGTGCAAGGAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS CCA 90 bp ACCAGGAATTCCTTGCACATCTCTCGGACAATCATGCGGTCCATCTaGCACTGGGGTGAGGTCTCCTCCTCATTCAGGATGCGTCGCAGT +
Preference number: 5 (lower is better)
Translates to: TRNSLHISRTIMRSI*HWGEVSSSFRMRRS
Trigger: ACTGCGACGCATCCTGAATGAGGAGGAGACCTCACCCCAGTGCCAGATGGACCGCATGATTGTCCGAGAGATGTGCAAGGAATTCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR CAA 90 bp GAGATTCGGTCATTGGCTTTCTCAGTGCCATCATCCTGTTCCATGAGGCTCCAGTCCCGCATGGCTGTGTaGTGTACAGCCTCGATGGCC +
Preference number: 5 (lower is better)
Translates to: EIRSLAFSVPSSCSMRLQSRMAV*CTASMA
Trigger: GGCCATCGAGGCTGTACACAACACAGCCATGCGGGA...CTGGAGCCTCATGGAACAGGATGATGGCACTGAGAAAGCCAATGACCGAATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CAA 90 bp TCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAGCTCGACACACCCCATaGGGCTGCCTGGCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: SGSFCHLIPSHCQCKTFLARHTP*GCLAAA
Trigger: TGCTGCAGCCAGGCAGCCCAATGGGGTGTGTCGAGC...TAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CAA 90 bp AGGCTGTACTTGCCACCATCCCGCATGGCTGTGTTGTGTACAGCCTCGATGGCCCTGAGGTTGTACCAGTaGCCACTTCTTCTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: RLYLPPSRMAVLCTASMALRLYQ*PLLLLQ
Trigger: CTGCAGAAGAAGAAGTGGCAACTGGTACAACCTCAG...GGCCATCGAGGCTGTACACAACACAGCCATGCGGGATGGTGGCAAGTACAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS-3UTR CAA 90 bp GGATGGCCTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCCATCAGAGGCTGAGGTaGTACCAGTTGCCACTTCTT +
Preference number: 5 (lower is better)
Translates to: GWPVSKIPLSKQQLGQGLHQRLR*YQLPLL
Trigger: AAGAAGTGGCAACTGGTACAACCTCAGCCTCTGATG...GAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAGGCCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CAA 90 bp GAGATTCGGTCATTGGCTTTCTCAGTGCCATCATCCTGTTCCATGAGGCTCCAGGCCATGCTGAGGTCCTaGCCCTCTACGAGTGAGAGG +
Preference number: 5 (lower is better)
Translates to: EIRSLAFSVPSSCSMRLQAMLRS*PSTSER
Trigger: CCTCTCACTCGTAGAGGGCAAGGACCTCAGCATGGC...CTGGAGCCTCATGGAACAGGATGATGGCACTGAGAAAGCCAATGACCGAATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CAA 90 bp CAGACCATGGTCCCCAATCCTACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGATGGCGCCAAAGCACTaGAGGAGCAGCAGCCGCAGT +
Preference number: 5 (lower is better)
Translates to: QTMVPNPTLGPSLKFYFRMAPKH*RSSSRS
Trigger: ACTGCGGCTGCTGCTCCTCAAGTGCTTTGGCGCCAT...CCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGTAGGATTGGGGACCATGGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CAA 90 bp CTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCTCGGTGTTCCATTaGGTAATAGGCCACCAAGGC +
Preference number: 5 (lower is better)
Translates to: LGPSLKFYFRWGSCSGSFCSVFH*VIGHQG
Trigger: GCCTTGGTGGCCTATTACCAAATGGAACACCGAGCA...GAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CAA 90 bp CCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATGGCTGTGGCTCATGTTaGAAGATGCGCACAGGGTCA +
Preference number: 5 (lower is better)
Translates to: PAQVPSATLSPPTVSAKHGCGSC*KMRTGS
Trigger: TGACCCTGTGCGCATCTTCAAACATGAGCCACAGCC...ATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR CAA 90 bp ATCCTACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGGCTGTGGCTCATGTTaGAAGATGCGCACAGGGTCA +
Preference number: 5 (lower is better)
Translates to: ILHLAPLLSSTSGGGPAQGCGSC*KMRTGS
Trigger: TGACCCTGTGCGCATCTTCAAACATGAGCCACAGCC...CTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGTAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR CAA 90 bp GAGATTCGGTCATTGGCTTTCTCAGTGCCATCATCCTGTTCCATGAGGCTCCAGACGTCCTGCAGGAACTaGAGGACAGAGTGTGGTGGC +
Preference number: 5 (lower is better)
Translates to: EIRSLAFSVPSSCSMRLQTSCRN*RTECGG
Trigger: GCCACCACACTCTGTCCTCAAGTTCCTGCAGGACGT...CTGGAGCCTCATGGAACAGGATGATGGCACTGAGAAAGCCAATGACCGAATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CAA 90 bp CCTGTCTCCAAGATCCCGCTTTCAAAGCAGCAGCTTGGCCAAGGCCTCTGGGGGAAAGAGATTCGGTCATaGGCTTTCTCAGTGCCATCA +
Preference number: 5 (lower is better)
Translates to: PVSKIPLSKQQLGQGLWGKEIRS*AFSVPS
Trigger: TGATGGCACTGAGAAAGCCAATGACCGAATCTCTTT...CCCCCAGAGGCCTTGGCCAAGCTGCTGCTTTGAAAGCGGGATCTTGGAGACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CAA 90 bp TCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTATCCCGCATGGCTGTGTaGTGTACAGCCTCGATGGCC +
Preference number: 5 (lower is better)
Translates to: SGSFCHLIPSHCQCKTFLSRMAV*CTASMA
Trigger: GGCCATCGAGGCTGTACACAACACAGCCATGCGGGA...TAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CAA 90 bp CCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCCTGAGGTTGTACCAGTaGCCACTTCTTCTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: PLLSSTSGGGPAQVPSATLRLYQ*PLLLLQ
Trigger: CTGCAGAAGAAGAAGTGGCAACTGGTACAACCTCAG...GGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CAA 90 bp TCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAATGGCGCCAAAGCACTaGAGGAGCAGCAGCCGCAGT +
Preference number: 5 (lower is better)
Translates to: SGSFCHLIPSHCQCKTFLMAPKH*RSSSRS
Trigger: ACTGCGGCTGCTGCTCCTCAAGTGCTTTGGCGCCAT...TAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CAA 90 bp ATCCTACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGTTGACATTGGCGTGTTaGCTCAGGGCAGCCATGATG +
Preference number: 5 (lower is better)
Translates to: ILHLAPLLSSTSGGGPAQLTLAC*LRAAMM
Trigger: CATCATGGCTGCCCTGAGCAAACACGCCAATGTCAA...CTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGTAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR CAA 90 bp AAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCGAGAAGATCTTGACATaGGCGTGTTTGCTCAGGGCA +
Preference number: 5 (lower is better)
Translates to: KFYFRWGSCSGSFCHLIPEKILT*ACLLRA
Trigger: TGCCCTGAGCAAACACGCCAATGTCAAGATCTTCTC...GGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR CAA 90 bp TGTGCGGGTGGAGGGGAGGACATGAGCAGCACTCACTGCAAAGCTAAGGCAAAGTTCTCGGAGAAGATCTaGACATTGGCGTGTTTGCTC +
Preference number: 5 (lower is better)
Translates to: CAGGGEDMSSTHCKAKAKFSEKI*TLACLL
Trigger: GAGCAAACACGCCAATGTCAAGATCTTCTCCGAGAA...CTTTGCCTTAGCTTTGCAGTGAGTGCTGCTCATGTCCTCCCCTCCACCCGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CAA 90 bp GAGATTCGGTCATTGGCTTTCTCAGTGCCATCATCCTGTTCCATGAGGCTCCAGTACTCCATGCGCAGCTaGTCTCCTGGTGACAGGTCT +
Preference number: 5 (lower is better)
Translates to: EIRSLAFSVPSSCSMRLQYSMRS*SPGDRS
Trigger: AGACCTGTCACCAGGAGACAAGCTGCGCATGGAGTA...CTGGAGCCTCATGGAACAGGATGATGGCACTGAGAAAGCCAATGACCGAATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CAA 90 bp AAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCTCCCCAATCCTACACTaGGCCCCTCTCTTAAGTTCT +
Preference number: 5 (lower is better)
Translates to: KFYFRWGSCSGSFCHLIPSPILH*APLLSS
Trigger: AGAACTTAAGAGAGGGGCCAAGTGTAGGATTGGGGA...GGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR CAA 90 bp TGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTAGGGCCAAGCCCCTTCTCGGAGAAGATCTaGACATTGGCGTGTTTGCTC +
Preference number: 5 (lower is better)
Translates to: CHLIPSHCQCKTFLGPSPFSEKI*TLACLL
Trigger: GAGCAAACACGCCAATGTCAAGATCTTCTCCGAGAA...GGGGCTTGGCCCTAAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR CAA 90 bp ACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTCGGAGAAGATCTaGACATTGGCGTGTTTGCTC +
Preference number: 5 (lower is better)
Translates to: TLGPSLKFYFRWGSCSGSFSEKI*TLACLL
Trigger: GAGCAAACACGCCAATGTCAAGATCTTCTCCGAGAA...GGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS CCA 90 bp ATCTTGACATTGGCGTGTTTGCTCAGGGCAGCCATGATGACATTCTaGTCAGCAGCTAAGGAAGGACATGGGTATAGACAGGGTGCTGAG +
Preference number: 5 (lower is better)
Translates to: ILTLACLLRAAMMTF*SAAKEGHGYRQGAE
Trigger: CTCAGCACCCTGTCTATACCCATGTCCTTCCTTAGCTGCTGACCAGAATGTCATCATGGCTGCCCTGAGCAAACACGCCAATGTCAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470006.1
CDS-3UTR CAA 90 bp CTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTACTGAGGTTGTACCAGTaGCCACTTCTTCTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: LLSSTSGGGPAQVPSATLLRLYQ*PLLLLQ
Trigger: CTGCAGAAGAAGAAGTGGCAACTGGTACAACCTCAG...TAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CAA 90 bp AAGTTCTACTTCAGGTGGGGGTCCTGCTCAGGTTCCTTCTGCCACCTTATCCCCAAAGAGATTCGGTCATaGGCTTTCTCAGTGCCATCA +
Preference number: 5 (lower is better)
Translates to: KFYFRWGSCSGSFCHLIPKEIRS*AFSVPS
Trigger: TGATGGCACTGAGAAAGCCAATGACCGAATCTCTTT...GGGGATAAGGTGGCAGAAGGAACCTGAGCAGGACCCCCACCTGAAGTAGAACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CAA 90 bp ATCCTACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGCTCTTGCACATTTTCTaGCAAACTTCAGGGTCTGCA +
Preference number: 5 (lower is better)
Translates to: ILHLAPLLSSTSGGGPAQLLHIF*QTSGSA
Trigger: TGCAGACCCTGAAGTTTGCAAGAAAATGTGCAAGAG...CTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGTAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CAA 90 bp CTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTGAGAAGATCTTGACATaGGCGTGTTTGCTCAGGGCA +
Preference number: 5 (lower is better)
Translates to: LRFLLPPYPLPLSVQNILEKILT*ACLLRA
Trigger: TGCCCTGAGCAAACACGCCAATGTCAAGATCTTCTC...AAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS-3UTR CAA 90 bp AATCCTACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCACTCTTGCACATTTTCTaGCAAACTTCAGGGTCTGCA +
Preference number: 5 (lower is better)
Translates to: NPTLGPSLKFYFRWGSCSLLHIF*QTSGSA
Trigger: TGCAGACCCTGAAGTTTGCAAGAAAATGTGCAAGAG...TGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGTAGGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS-3UTR CAA 90 bp ATCCTACACTTGGCCCCTCTCTTAAGTTCTACTTCAGGTGGGGGTCCTGCTCAGTCGAACTCGTTTCTCTaGCACATTTTCTTGCAAACT +
Preference number: 5 (lower is better)
Translates to: ILHLAPLLSSTSGGGPAQSNSFL*HIFLQT
Trigger: AGTTTGCAAGAAAATGTGCAAGAGAAACGAGTTCGA...CTGAGCAGGACCCCCACCTGAAGTAGAACTTAAGAGAGGGGCCAAGTGTAGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS GCA 90 bp GGTAATAGGCCACCAAGGCCAGGACAGACTCGAACTCGTTTCTCTTaGACATTTTCTTGCAAACTTCAGGGTCTGCATCAGTCAGAATAT +
Preference number: 5 (lower is better)
Translates to: GNRPPRPGQTRTRFS*TFSCKLQGLHQSEY
Trigger: ATATTCTGACTGATGCAGACCCTGAAGTTTGCAAGAAAATGTGCAAGAGAAACGAGTTCGAGTCTGTCCTGGCCTTGGTGGCCTATTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000415281.1
ENST00000416649.6
CDS-3UTR CAA 90 bp CTCAGGTTCCTTCTGCCACCTTATCCCCTCCCACTGTCAGTGCAAAACATTCTTTCGAACTCGTTTCTCTaGCACATTTTCTTGCAAACT +
Preference number: 5 (lower is better)
Translates to: LRFLLPPYPLPLSVQNILSNSFL*HIFLQT
Trigger: AGTTTGCAAGAAAATGTGCAAGAGAAACGAGTTCGA...AAGAATGTTTTGCACTGACAGTGGGAGGGGATAAGGTGGCAGAAGGAACCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294129.7
ENST00000416649.6
CDS GCA 72 bp GCAGGTAGGCTGGCGGCACGTAGCCCGTCTCACCACTaGGCGCCCGCGCGGCCAGCCACCAGTGCGCGCTGC +
Preference number: 6 (lower is better)
Translates to: AGRLAARSPSHH*APARPATSARC
Trigger: GCAGCGCGCACTGGTGGCTGGCCGCGCGGGCGCGCAGTGGTGAGACGGGCTACGTGCCGCCAGCCTACCTGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294129.7
ENST00000416649.6
ENST00000439518.5
ENST00000454134.1
CDS GCA 72 bp CACTGCGCGCCCGCGCGGCCAGCCACCAGTGCGCGCTaGTTCGCTCTAGCACCAGGAAGGTCTCGCCCGCGG +
Preference number: 6 (lower is better)
Translates to: HCAPARPATSAR*FALAPGRSRPR
Trigger: CCGCGGGCGAGACCTTCCTGGTGCTAGAGCGAAGCAGCGCGCACTGGTGGCTGGCCGCGCGGGCGCGCAGTG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294129.7
ENST00000416649.6
ENST00000439518.5
ENST00000454134.1
CDS CCA 72 bp CCAGGAAGGTCTCGCCCGCGGCGAACGCCAGCGCGTTaGGCTCCGCCGAGCGGAACGCGTACAGCGCGCGGT +
Preference number: 6 (lower is better)
Translates to: PGRSRPRRTPAR*APPSGTRTARG
Trigger: ACCGCGCGCTGTACGCGTTCCGCTCGGCGGAGCCCAACGCGCTGGCGTTCGCCGCGGGCGAGACCTTCCTGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294129.7
ENST00000416649.6
ENST00000439518.5
ENST00000454134.1
CDS CAA 72 bp ACCAGGAAGGTCTCGCCCGCGGCGAACGCCAGCGCGTaGGGCTCCGCCGAGCGGAACGCGTACAGCGCGCGG +
Preference number: 6 (lower is better)
Translates to: TRKVSPAANASA*GSAERNAYSAR
Trigger: CCGCGCGCTGTACGCGTTCCGCTCGGCGGAGCCCAACGCGCTGGCGTTCGCCGCGGGCGAGACCTTCCTGGT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294129.7
ENST00000416649.6
ENST00000439518.5
ENST00000454134.1
CDS GCA 72 bp GCCCTCCCGGTGAAAGCGCGCTCCGCTCGTAGCGGGTaGGCCCCTACCGCCCTGGGGCAGTGGGTCCCATCT +
Preference number: 6 (lower is better)
Translates to: ALPVKARSARSG*APTALGQWVPS
Trigger: AGATGGGACCCACTGCCCCAGGGCGGTAGGGGCGCACCCGCTACGAGCGGAGCGCGCTTTCACCGGGAGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426678.1
CDS CCA 72 bp ATCCTGCTCCAGGCCCTGCAGGCGGCGCAGGTAGGCTaGCGGCACGTAGCCCGTCTCACCACTGCGCGCCCG +
Preference number: 6 (lower is better)
Translates to: ILLQALQAAQVG*RHVARLTTARP
Trigger: CGGGCGCGCAGTGGTGAGACGGGCTACGTGCCGCCAGCCTACCTGCGCCGCCTGCAGGGCCTGGAGCAGGAT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000416649.6
ENST00000439518.5
CDS GCA 72 bp GACCTCCCGGTGAAAGCGCGCTCCGCTCGTAGCGGGTaGGCCCCTACCGCCCTGGGGCAGTGGGTCCCATCT +
Preference number: 6 (lower is better)
Translates to: DLPVKARSARSG*APTALGQWVPS
Trigger: AGATGGGACCCACTGCCCCAGGGCGGTAGGGGCGCACCCGCTACGAGCGGAGCGCGCTTTCACCGGGAGGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453349.5
CDS CAA 90 bp CGCTCTAGCACCAGGAAGGTCTCGCCCGCGGCGAACGCCAGCGCGTaGGGCTCCGCCGAGCGGAACGCGTACAGCGCGCGGTACATGAGG +
Preference number: 6 (lower is better)
Translates to: RSSTRKVSPAANASA*GSAERNAYSARYMR
Trigger: CCTCATGTACCGCGCGCTGTACGCGTTCCGCTCGGCGGAGCCCAACGCGCTGGCGTTCGCCGCGGGCGAGACCTTCCTGGTGCTAGAGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294129.7
ENST00000416649.6
ENST00000439518.5
ENST00000454134.1
CDS GCA 72 bp GTACAGCGCGCGGTACATGAGGCCGGGCAGGGCAGGTaGAGGGAAGGTGGCAAGGGCTGCGGCGCCACAACG +
Preference number: 6 (lower is better)
Translates to: VQRAVHEAGQGR*REGGKGCGATT
Trigger: CGTTGTGGCGCCGCAGCCCTTGCCACCTTCCCTGCACCTGCCCTGCCCGGCCTCATGTACCGCGCGCTGTAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000416649.6
ENST00000454134.1
CDS GCA 72 bp GTCTCACCACTGCGCGCCCGCGCGGCCAGCCACCAGTaGGCGCTGCTTCGCTCTAGCACCAGGAAGGTCTCG +
Preference number: 6 (lower is better)
Translates to: VSPLRARAASHQ*ALLRSSTRKVS
Trigger: CGAGACCTTCCTGGTGCTAGAGCGAAGCAGCGCGCACTGGTGGCTGGCCGCGCGGGCGCGCAGTGGTGAGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294129.7
ENST00000416649.6
ENST00000439518.5
ENST00000454134.1
CDS CCA 72 bp GGACAGCAGTTAGACCTGCAGGCGGCGCAGGTAGGCTaGCGGCACGTAGCCCGTCTCACCACTGCGCGCCCG +
Preference number: 6 (lower is better)
Translates to: GQQLDLQAAQVG*RHVARLTTARP
Trigger: CGGGCGCGCAGTGGTGAGACGGGCTACGTGCCGCCAGCCTACCTGCGCCGCCTGCAGGTCTAACTGCTGTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454134.1
CDS CAA 90 bp TCAGCCACCGCCCAGCCAGGCCCCACCCCACCTGGCAGGTGCAGGTaGAGAGCCAGAAGCAGGTTCACGCAGAGGTCCGGCAGCTGCTCT +
Preference number: 6 (lower is better)
Translates to: SATAQPGPTPPGRCR*RARSRFTQRSGSCS
Trigger: AGAGCAGCTGCCGGACCTCTGCGTGAACCTGCTTCTGGCTCTCAACCTGCACCTGCCAGGTGGGGTGGGGCCTGGCTGGGCGGTGGCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470006.1
CDS CCA 72 bp CGCGCTCCGCTCGTAGCGGGTGCGCCCCTACCGCCCTaGGGCAGTGGGTCCCATCTACTAATTGCAAGGACG +
Preference number: 6 (lower is better)
Translates to: RAPLVAGAPLPP*GSGSHLLIART
Trigger: CGTCCTTGCAATTAGTAGATGGGACCCACTGCCCCAGGGCGGTAGGGGCGCACCCGCTACGAGCGGAGCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426678.1
ENST00000453349.5
CDS CCA 72 bp GCTCGTAGCGGGTGCGCCCCTACCGCCCTGGGGCAGTaGGTCCCATCTACTAATTGCAAGGACGGCGACCTC +
Preference number: 6 (lower is better)
Translates to: ARSGCAPTALGQ*VPSTNCKDGDL
Trigger: GAGGTCGCCGTCCTTGCAATTAGTAGATGGGACCCACTGCCCCAGGGCGGTAGGGGCGCACCCGCTACGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426678.1
ENST00000453349.5
CDS CAA 72 bp GGCGACCTCGAAAGGATGATCTTGCTGATCCGACACTaGGAAGCCCCCGCGGGGCCCGGCTCTCGGTGTGTC +
Preference number: 6 (lower is better)
Translates to: GDLERMILLIRH*EAPAGPGSRCV
Trigger: GACACACCGAGAGCCGGGCCCCGCGGGGGCTTCCAAGTGTCGGATCAGCAAGATCATCCTTTCGAGGTCGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426678.1
ENST00000453349.5
CDS TCA 72 bp CCTTGCCCTCTACGAGTGAGAGGAGGACCTGCTCCATaGCTGGTGAGCTGGCCGGCACCGAGGCCTGGATGT +
Preference number: 6 (lower is better)
Translates to: PCPLRVRGGPAP*LVSWPAPRPGC
Trigger: ACATCCAGGCCTCGGTGCCGGCCAGCTCACCAGTCATGGAGCAGGTCCTCCTCTCACTCGTAGAGGGCAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294129.7
ENST00000415281.1
ENST00000416649.6
ENST00000439518.5
CDS GCA 72 bp AGAGCCAGAAGCAGGTTCACGCAGAGGTCCGGCAGCTaGTCTGTGGTGTCCAAGGGCAGCCCATCCTCGACG +
Preference number: 6 (lower is better)
Translates to: RARSRFTQRSGS*SVVSKGSPSST
Trigger: CGTCGAGGATGGGCTGCCCTTGGACACCACAGAGCAGCTGCCGGACCTCTGCGTGAACCTGCTTCTGGCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000416649.6
ENST00000470006.1
CDS GCA 72 bp GCGAAAGGCGTGCCCAGGTGCTCCTGCGTGTCTGTCTaGATGTCCCTCGCCAGCTCTACAGGCAGCACGGAT +
Preference number: 6 (lower is better)
Translates to: AKGVPRCSCVSV*MSLASSTGSTD
Trigger: ATCCGTGCTGCCTGTAGAGCTGGCGAGGGACATGCAGACAGACACGCAGGAGCACCTGGGCACGCCTTTCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415281.1
CDS CCA 72 bp GTGAGGTCTCCTCCTCATTCAGGATGCGTCGCAGTATaGCCTGCAGGTCGGGTAGCCGGTGGCGGTGCTGCA +
Preference number: 6 (lower is better)
Translates to: VRSPPHSGCVAV*PAGRVAGGGAA
Trigger: TGCAGCACCGCCACCGGCTACCCGACCTGCAGGCCATACTGCGACGCATCCTGAATGAGGAGGAGACCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS TCA 72 bp AGCTGGCCGGCACCGAGGCCTGGATGTGACCCACTATaGTGCCGATGGCCACCCGGCATAATTCGTGGCTCA +
Preference number: 6 (lower is better)
Translates to: SWPAPRPGCDPL*CRWPPGIIRGS
Trigger: TGAGCCACGAATTATGCCGGGTGGCCATCGGCATCATAGTGGGTCACATCCAGGCCTCGGTGCCGGCCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294129.7
ENST00000415281.1
ENST00000416649.6
ENST00000439518.5
CDS CCA 72 bp GCTGAAGGGCCTCTGCGTGACAGGGTCTCTTTCCGGTaGTGGATCAGCTTCCGGGAGGTCCCACTTCACTCC +
Preference number: 6 (lower is better)
Translates to: AEGPLRDRVSFR*WISFREVPLHS
Trigger: GGAGTGAAGTGGGACCTCCCGGAAGCTGATCCACCACCGGAAAGAGACCCTGTCACGCAGAGGCCCTTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426678.1
CDS CAA 90 bp GTCCCATCTACTAATTGCAAGGACGGCGACCTCGAAAGGATGATCTaGCTGATCCGACACTTGGAAGCCCCCGCGGGGCCCGGCTCTCGG +
Preference number: 6 (lower is better)
Translates to: VPSTNCKDGDLERMI*LIRHLEAPAGPGSR
Trigger: CCGAGAGCCGGGCCCCGCGGGGGCTTCCAAGTGTCGGATCAGCAAGATCATCCTTTCGAGGTCGCCGTCCTTGCAATTAGTAGATGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426678.1
ENST00000453349.5
CDS TCA 72 bp ATGACTGGTGAGCTGGCCGGCACCGAGGCCTGGATGTaGCCCACTATGATGCCGATGGCCACCCGGCATAAT +
Preference number: 6 (lower is better)
Translates to: MTGELAGTEAWM*PTMMPMATRHN
Trigger: ATTATGCCGGGTGGCCATCGGCATCATAGTGGGTCACATCCAGGCCTCGGTGCCGGCCAGCTCACCAGTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294129.7
ENST00000415281.1
ENST00000416649.6
ENST00000439518.5
CDS TCA 72 bp TGGCTGCATCCAGGCTGCACATGGCGCCAAAGCACTTaGGGAGCAGCAGCCGCAGTGATGCTCGGTGTTCCA +
Preference number: 6 (lower is better)
Translates to: WLHPGCTWRQST*GAAAAVMLGVP
Trigger: TGGAACACCGAGCATCACTGCGGCTGCTGCTCCTCAAGTGCTTTGGCGCCATGTGCAGCCTGGATGCAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000415281.1
ENST00000416649.6
CDS GCA 72 bp ATGACACCCTCATCCTCATATAGTGCCCAACTGCGCTaGTGGGCGTCGTCCTTCCGGCGAGCCAGGTCTGCA +
Preference number: 6 (lower is better)
Translates to: MTPSSSYSAQLR*WASSFRRARSA
Trigger: TGCAGACCTGGCTCGCCGGAAGGACGACGCCCAGCAGCGCAGTTGGGCACTATATGAGGATGAGGGTGTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000415281.1
ENST00000416649.6
CDS GCA 72 bp AAGATGGCAGCTGTGGCCGGGCTGCCAAACACGTCCTaGAGGAACTTGAGGACAGAGTGTGGTGGCTGTGGC +
Preference number: 6 (lower is better)
Translates to: KMAAVAGLPNTS*RNLRTECGGCG
Trigger: GCCACAGCCACCACACTCTGTCCTCAAGTTCCTGCAGGACGTGTTTGGCAGCCCGGCCACAGCTGCCATCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
ENST00000470006.1
CDS GCA 72 bp CCTCGACGATGTTCAGTAGGAACTGGGCGAAAGGCGTaGCCAGGTGCTCCTGCGTGTCTGTCTGCATGTCCC +
Preference number: 6 (lower is better)
Translates to: PRRCSVGTGRKA*PGAPACLSACP
Trigger: GGGACATGCAGACAGACACGCAGGAGCACCTGGGCACGCCTTTCGCCCAGTTCCTACTGAACATCGTCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415281.1
CDS CCA 72 bp ACACCCTCATCCTCATATAGTGCCCAACTGCGCTGCTaGGCGTCGTCCTTCCGGCGAGCCAGGTCTGCAAAG +
Preference number: 6 (lower is better)
Translates to: TPSSSYSAQLRC*ASSFRRARSAK
Trigger: CTTTGCAGACCTGGCTCGCCGGAAGGACGACGCCCAGCAGCGCAGTTGGGCACTATATGAGGATGAGGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000415281.1
ENST00000416649.6
CDS CCA 72 bp GAAGCAGGTTCACGCAGAGGTCCGGCAGCTGCTCTGTaGTGTCCAAGGGCAGCCCATCCTCGACGATGTTCA +
Preference number: 6 (lower is better)
Translates to: EAGSRRGPAAAL*CPRAAHPRRCS
Trigger: TGAACATCGTCGAGGATGGGCTGCCCTTGGACACCACAGAGCAGCTGCCGGACCTCTGCGTGAACCTGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294129.7
ENST00000415281.1
ENST00000416649.6
ENST00000470006.1
CDS CCA 72 bp AAGGGCAGCCCATCCTCGACGATGTTCAGTAGGAACTaGGCGAAAGGCGTGCCCAGGTGCTCCTGCGTGTCT +
Preference number: 6 (lower is better)
Translates to: KGSPSSTMFSRN*AKGVPRCSCVS
Trigger: AGACACGCAGGAGCACCTGGGCACGCCTTTCGCCCAGTTCCTACTGAACATCGTCGAGGATGGGCTGCCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415281.1
CDS CAA 72 bp ATGGCTGCATCCAGGCTGCACATGGCGCCAAAGCACTaGAGGAGCAGCAGCCGCAGTGATGCTCGGTGTTCC +
Preference number: 6 (lower is better)
Translates to: MAASRLHMAPKH*RSSSRSDARCS
Trigger: GGAACACCGAGCATCACTGCGGCTGCTGCTCCTCAAGTGCTTTGGCGCCATGTGCAGCCTGGATGCAGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294129.7
ENST00000415281.1
ENST00000416649.6
ENST00000470006.1
CDS CAA 90 bp CCCCTCAACACTCACTGGAGGACTCCACGCTGTTCCAGGCTGTACTaGCCACCATCCCGCATGGCTGTGTTGTGTACAGCCTCGATGGCC +
Preference number: 6 (lower is better)
Translates to: PLNTHWRTPRCSRLY*PPSRMAVLCTASMA
Trigger: GGCCATCGAGGCTGTACACAACACAGCCATGCGGGATGGTGGCAAGTACAGCCTGGAACAGCGTGGAGTCCTCCAGTGAGTGTTGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426678.1
CDS TCA 72 bp GCTCTACAGGCAGCACGGATGACACAAGCGTGGAGATaGTGGCTGCATCCAGGCTGCACATGGCGCCAAAGC +
Preference number: 6 (lower is better)
Translates to: ALQAARMTQAWR*WLHPGCTWRQS
Trigger: GCTTTGGCGCCATGTGCAGCCTGGATGCAGCCATCATCTCCACGCTTGTGTCATCCGTGCTGCCTGTAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294129.7
ENST00000415281.1
ENST00000416649.6
ENST00000470006.1
CDS TCA 72 bp CTGCATGTCCCTCGCCAGCTCTACAGGCAGCACGGATaGCACAAGCGTGGAGATGATGGCTGCATCCAGGCT +
Preference number: 6 (lower is better)
Translates to: LHVPRQLYRQHG*HKRGDDGCIQA
Trigger: AGCCTGGATGCAGCCATCATCTCCACGCTTGTGTCATCCGTGCTGCCTGTAGAGCTGGCGAGGGACATGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294129.7
ENST00000415281.1
ENST00000416649.6
ENST00000470006.1
CDS CCA 72 bp TCCGGGAGGTCCCACTTCACTCCCCTCAACACTCACTaGAGGACTCCACGCTGTTCCAGGCTGTACTTGCCA +
Preference number: 6 (lower is better)
Translates to: SGRSHFTPLNTH*RTPRCSRLYLP
Trigger: TGGCAAGTACAGCCTGGAACAGCGTGGAGTCCTCCAGTGAGTGTTGAGGGGAGTGAAGTGGGACCTCCCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426678.1
CDS CAA 72 bp ACTAATTGCAAGGACGGCGACCTCGAAAGGATGATCTaGCTGATCCGACACTTGGAAGCCCCCGCGGGGCCC +
Preference number: 6 (lower is better)
Translates to: TNCKDGDLERMI*LIRHLEAPAGP
Trigger: GGGCCCCGCGGGGGCTTCCAAGTGTCGGATCAGCAAGATCATCCTTTCGAGGTCGCCGTCCTTGCAATTAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426678.1
ENST00000453349.5
CDS CAA 90 bp CCAGGCTCAGTGTACCCAGGGCTTCCAGGTCATCAGAGGCTGAGGTaGTACCAGTTGCCACTTCTTCTTCTGCAGGGGGTTCAGGTGCTG +
Preference number: 6 (lower is better)
Translates to: PGSVYPGLPGHQRLR*YQLPLLLLQGVQVL
Trigger: CAGCACCTGAACCCCCTGCAGAAGAAGAAGTGGCAACTGGTACAACCTCAGCCTCTGATGACCTGGAAGCCCTGGGTACACTGAGCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294129.7
ENST00000415281.1
ENST00000416649.6
ENST00000439518.5
CDS CAA 90 bp AAGATGGCAGCTGTGGCCGGGCTGCCAAACACGTCCTGCAGGAACTaGAGGACAGAGTGTGGTGGCTGTGGCTCATGTTTGAAGATGCGC +
Preference number: 6 (lower is better)
Translates to: KMAAVAGLPNTSCRN*RTECGGCGSCLKMR
Trigger: GCGCATCTTCAAACATGAGCCACAGCCACCACACTCTGTCCTCAAGTTCCTGCAGGACGTGTTTGGCAGCCCGGCCACAGCTGCCATCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
ENST00000470006.1
CDS GCA 72 bp CCTCGACGATGTTCAGTAGGAACTGGGCGAAAGGCGTaGCCAGGTGCTCATAGTGTGCATAGGGCACTGCCT +
Preference number: 6 (lower is better)
Translates to: PRRCSVGTGRKA*PGAHSVHRALP
Trigger: AGGCAGTGCCCTATGCACACTATGAGCACCTGGGCACGCCTTTCGCCCAGTTCCTACTGAACATCGTCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000416649.6
ENST00000470006.1
CDS GCA 72 bp CCTACCGCCCTGGGGCAGTGGGTCCCATCTACTAATTaGAAGGACGGCGACCTCGAAAGGATGATCTTGCTG +
Preference number: 6 (lower is better)
Translates to: PTALGQWVPSTN*KDGDLERMILL
Trigger: CAGCAAGATCATCCTTTCGAGGTCGCCGTCCTTGCAATTAGTAGATGGGACCCACTGCCCCAGGGCGGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426678.1
ENST00000453349.5
CDS GCA 72 bp CTCACTGGAGGACTCCACGCTGTTCCAGGCTGTACTTaGCACCATCCCGCATGGCTGTGTTGTGTACAGCCT +
Preference number: 6 (lower is better)
Translates to: LTGGLHAVPGCT*HHPAWLCCVQP
Trigger: AGGCTGTACACAACACAGCCATGCGGGATGGTGGCAAGTACAGCCTGGAACAGCGTGGAGTCCTCCAGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426678.1
CDS CAA 72 bp ACTCACTGGAGGACTCCACGCTGTTCCAGGCTGTACTaGCCACCATCCCGCATGGCTGTGTTGTGTACAGCC +
Preference number: 6 (lower is better)
Translates to: THWRTPRCSRLY*PPSRMAVLCTA
Trigger: GGCTGTACACAACACAGCCATGCGGGATGGTGGCAAGTACAGCCTGGAACAGCGTGGAGTCCTCCAGTGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426678.1
CDS TCA 72 bp CTCTCGGACAATCATGCGGTCCATCTGGCACTGGGGTaGGGTCTCCTCCTCATTCAGGATGCGTCGCAGTAT +
Preference number: 6 (lower is better)
Translates to: LSDNHAVHLALG*GLLLIQDASQY
Trigger: ATACTGCGACGCATCCTGAATGAGGAGGAGACCTCACCCCAGTGCCAGATGGACCGCATGATTGTCCGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS TCA 72 bp GCTCAGTGTACCCAGGGCTTCCAGGTCATCAGAGGCTaGGGTTGTACCAGTTGCCACTTCTTCTTCTGCAGG +
Preference number: 6 (lower is better)
Translates to: AQCTQGFQVIRG*GCTSCHFFFCR
Trigger: CCTGCAGAAGAAGAAGTGGCAACTGGTACAACCTCAGCCTCTGATGACCTGGAAGCCCTGGGTACACTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294129.7
ENST00000415281.1
ENST00000416649.6
ENST00000439518.5
CDS GCA 72 bp CCAGGCACCTTGTCTCCTGGTGACAGGTCTGCGATGTaGCGCACAGTGATGTCAATGAGAGCCATCATGTCT +
Preference number: 6 (lower is better)
Translates to: PGTLSPGDRSAM*RTVMSMRAIMS
Trigger: AGACATGATGGCTCTCATTGACATCACTGTGCGGCACATCGCAGACCTGTCACCAGGAGACAAGGTGCCTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413374.1
CDS CCA 72 bp GCCAAACACGTCCTGCAGGAACTTGAGGACAGAGTGTaGTGGCTGTGGCTCATGTTTGAAGATGCGCACAGG +
Preference number: 6 (lower is better)
Translates to: AKHVLQELEDRV*WLWLMFEDAHR
Trigger: CCTGTGCGCATCTTCAAACATGAGCCACAGCCACCACACTCTGTCCTCAAGTTCCTGCAGGACGTGTTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
ENST00000470006.1
CDS CCA 72 bp TCCTTGCACATCTCTCGGACAATCATGCGGTCCATCTaGCACTGGGGTGAGGTCTCCTCCTCATTCAGGATG +
Preference number: 6 (lower is better)
Translates to: SLHISRTIMRSI*HWGEVSSSFRM
Trigger: CATCCTGAATGAGGAGGAGACCTCACCCCAGTGCCAGATGGACCGCATGATTGTCCGAGAGATGTGCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS CAA 72 bp GTGTACCCAGGGCTTCCAGGTCATCAGAGGCTGAGGTaGTACCAGTTGCCACTTCTTCTTCTGCAGGGGGTT +
Preference number: 6 (lower is better)
Translates to: VYPGLPGHQRLR*YQLPLLLLQGV
Trigger: AACCCCCTGCAGAAGAAGAAGTGGCAACTGGTACAACCTCAGCCTCTGATGACCTGGAAGCCCTGGGTACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294129.7
ENST00000415281.1
ENST00000416649.6
ENST00000439518.5
CDS GCA 72 bp ATGCGCAGCTTGTCTCCTGGTGACAGGTCTGCGATGTaGCGCACAGTGATGTCAATGAGAGCCATCATGTCT +
Preference number: 6 (lower is better)
Translates to: MRSLSPGDRSAM*RTVMSMRAIMS
Trigger: AGACATGATGGCTCTCATTGACATCACTGTGCGGCACATCGCAGACCTGTCACCAGGAGACAAGCTGCGCAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000416649.6
ENST00000470006.1
CDS CAA 90 bp AGGAGCAACAACAGCTTCTCGGAGAAGATCTTGACATTGGCGTGTTaGCTCAGGGCAGCCATGATGACATTCTGGTCAGCAGCTGGCAGG +
Preference number: 6 (lower is better)
Translates to: RSNNSFSEKILTLAC*LRAAMMTFWSAAGR
Trigger: CCTGCCAGCTGCTGACCAGAATGTCATCATGGCTGCCCTGAGCAAACACGCCAATGTCAAGATCTTCTCCGAGAAGCTGTTGTTGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
CDS TCA 72 bp TCAGAATATGCAGCAGCTCCTCTAGGTAGCAGCGGATaGCACCCTCATCCTCATATAGTGCCCAACTGCGCT +
Preference number: 6 (lower is better)
Translates to: SEYAAAPLGSSG*HPHPHIVPNCA
Trigger: AGCGCAGTTGGGCACTATATGAGGATGAGGGTGTCATCCGCTGCTACCTAGAGGAGCTGCTGCATATTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294129.7
ENST00000415281.1
ENST00000416649.6
CDS CAA 90 bp AGGAGCAACAACAGCTTCTCGGAGAAGATCTTGACATTGGCGTGTTaGCTCAGGGCAGCCATGATGACATTCTGGTCAGCAGCTAAGGAA +
Preference number: 6 (lower is better)
Translates to: RSNNSFSEKILTLAC*LRAAMMTFWSAAKE
Trigger: TTCCTTAGCTGCTGACCAGAATGTCATCATGGCTGCCCTGAGCAAACACGCCAATGTCAAGATCTTCTCCGAGAAGCTGTTGTTGCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470006.1
CDS CAA 72 bp AACAGCTTCTCGGAGAAGATCTTGACATTGGCGTGTTaGCTCAGGGCAGCCATGATGACATTCTGGTCAGCA +
Preference number: 6 (lower is better)
Translates to: NSFSEKILTLAC*LRAAMMTFWSA
Trigger: TGCTGACCAGAATGTCATCATGGCTGCCCTGAGCAAACACGCCAATGTCAAGATCTTCTCCGAGAAGCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294129.7
ENST00000413374.1
ENST00000416649.6
ENST00000470006.1