RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NCKAP5L (Homo sapiens)

Ensembl gene IDs: ENSG00000167566

Ensembl transcript IDs: ENST00000335999.7, ENST00000433948.5, ENST00000477361.1, ENST00000480927.1, ENST00000491441.1

Found 600 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGGGACAGAAACCTTTCCCCACGAGAGAAGTGCAAGGAGGGCAGTaGGGAGGGCCGCTCACAGGGCATCCCAGGGGTCCTCCTCCCAGA +
Preference number: 1 (lower is better)
Translates to: EGQKPFPTREVQGGQ*GGPLTGHPRGPPPR
Trigger: TCTGGGAGGAGGACCCCTGGGATGCCCTGTGAGCGGCCCTCCCCACTGCCCTCCTTGCACTTCTCTCGTGGGGAAAGGTTTCTGTCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433948.5
3UTR TCA 90 bp CACGGCTGGTGGGCAGGAAGCCCAGCACCACAAGATGGCTCAGCCTaGAGTAGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCC +
Preference number: 1 (lower is better)
Translates to: HGWWAGSPAPQDGSA*SRDWRAATQWPLTP
Trigger: GGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCTACTTCAGGCTGAGCCATCTTGTGGTGCTGGGCTTCCTGCCCACCAGCCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
3UTR TCA 90 bp CCCAAGGTGGGGTATACTTCAGAGGAAACAGGCTGGAGGTACAACTaGGAACAGTCCTACAAGGTTCTGGGGAGGGACAGAAACCTTTCC +
Preference number: 1 (lower is better)
Translates to: PKVGYTSEETGWRYN*EQSYKVLGRDRNLS
Trigger: GGAAAGGTTTCTGTCCCTCCCCAGAACCTTGTAGGACTGTTCTCAGTTGTACCTCCAGCCTGTTTCCTCTGAAGTATACCCCACCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433948.5
3UTR-3UTR CCA 90 bp CAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCAGCGTGCAAGGAGGGCAGTaGGGAGGGCCGCTCACAGGG +
Preference number: 2 (lower is better)
Translates to: QHGGLQEGLARASGQRSSVQGGQ*GGPLTG
Trigger: CCCTGTGAGCGGCCCTCCCCACTGCCCTCCTTGCAC...GCTGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433948.5
3UTR-3UTR TCA 90 bp CTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGGGCGGGGTCTCTCCCTaGGCTGAGCACGGTCATCTC +
Preference number: 2 (lower is better)
Translates to: LHQHGGLQEGLARASGQRGGVSP*AEHGHL
Trigger: GAGATGACCGTGCTCAGCTCAGGGAGAGACCCCGCC...CCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
3UTR-3UTR GCA 90 bp ACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCACGGCCATGTCCGAAGTaGTGGGGGTGCGGCTACCCC +
Preference number: 2 (lower is better)
Translates to: TSTGASRRASRGLRGRGARPCPK*WGCGYP
Trigger: GGGGTAGCCGCACCCCCAGCACTTCGGACATGGCCG...TGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433948.5
3UTR-3UTR CCA 90 bp CCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGAGCCGGTCCAGTCTGTaGTCCCCAGCTCCAGCGGGG +
Preference number: 2 (lower is better)
Translates to: PQTPPARGPPGGPREGFGSRSSL*SPAPAG
Trigger: CCCCGCTGGAGCTGGGGACCACAGACTGGACCGGCT...CCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
3UTR-3UTR CCA 90 bp GTAGGGGACGGGCGGCTGGGCTCCTGGCTTCGCTTCCGGTCCACGGGCAGGGCCCATCCGCCGAAGCAGTaGGTGGTGGGGTGTGCCAGG +
Preference number: 2 (lower is better)
Translates to: VGDGRLGSWLRFRSTGRAHPPKQ*VVGCAR
Trigger: CCTGGCACACCCCACCACCCACTGCTTCGGCGGATG...GGCCCTGCCCGTGGACCGGAAGCGAAGCCAGGAGCCCAGCCGCCCGTCCCCTAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433948.5
3UTR-3UTR CCA 90 bp CCTGGCCCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCGAGGAGCAGCCGGGTTaGGCAGAGATGGCACGGCTG +
Preference number: 2 (lower is better)
Translates to: PGPQTPPARGPPGGPREGEEQPG*AEMARL
Trigger: CAGCCGTGCCATCTCTGCCCAACCCGGCTGCTCCTC...GCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGGGCCAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
3UTR-3UTR TCA 90 bp ACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCAGCAGCCCCTCAGCCCTaGCTCCCACAAGAGGACAGC +
Preference number: 2 (lower is better)
Translates to: TSTGASRRASRGLRGRGAAAPQP*LPQEDS
Trigger: GCTGTCCTCTTGTGGGAGTCAGGGCTGAGGGGCTGC...TGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433948.5
3UTR-3UTR CCA 90 bp CCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGCGGGTTGGGCAGAGATaGCACGGCTGGTGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: PQTPPARGPPGGPREGFGRVGQR*HGWWAG
Trigger: TCCTGCCCACCAGCCGTGCCATCTCTGCCCAACCCG...CCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
3UTR-3UTR TCA 90 bp ACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCAGAGCCTTACTCTGGGTaGGAGAAGGGACCAAGGGCG +
Preference number: 2 (lower is better)
Translates to: TSTGASRRASRGLRGRGAEPYSG*EKGPRA
Trigger: CGCCCTTGGTCCCTTCTCTCACCCAGAGTAAGGCTC...TGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
3UTR-3UTR CCA 90 bp CCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCCCCGAAAGGTGGGGAGGAGCAGCCGGGTTaGGCAGAGATGGCACGGCTG +
Preference number: 2 (lower is better)
Translates to: PSSAMSEVLGVRLPPKGGEEQPG*AEMARL
Trigger: CAGCCGTGCCATCTCTGCCCAACCCGGCTGCTCCTC...CCCACCTTTCGGGGGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433948.5
3UTR-3UTR GCA 90 bp GTAGGGGACGGGCGGCTGGGCTCCTGGCTTCGCTTCCGGTCCACGGGCAGGGCCACCTTCTTATCCACCTaGCTCCTTGGTCCCTTCAGG +
Preference number: 2 (lower is better)
Translates to: VGDGRLGSWLRFRSTGRATFLST*LLGPFR
Trigger: CCTGAAGGGACCAAGGAGGCAGGTGGATAAGAAGGT...GGCCCTGCCCGTGGACCGGAAGCGAAGCCAGGAGCCCAGCCGCCCGTCCCCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433948.5
3UTR-3UTR CCA 90 bp CAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCAGCGGAAGAGCCTTACTCTaGGTGAGAGAAGGGACCAAG +
Preference number: 2 (lower is better)
Translates to: QHGGLQEGLARASGQRSSGRALL*VREGTK
Trigger: CTTGGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCC...GCTGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
3UTR-3UTR TCA 90 bp GCTGGCCACTCTGCCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCCAGAGGGTGCAGCACTaGGACTGTGCGACACACAGG +
Preference number: 2 (lower is better)
Translates to: AGHSAFLGHVRSAGGAATQRVQH*DCATHR
Trigger: CCTGTGTGTCGCACAGTCTCAGTGCTGCACCCTCTG...GGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGGCAGAGTGGCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433948.5
3UTR-3UTR TCA 90 bp GGGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCCAGCGAGTCGTAGAGTaGGTCACTGAGAGACTCCGA +
Preference number: 2 (lower is better)
Translates to: GSPSPGAGHEESRSSLWSQRVVE*VTERLR
Trigger: TCGGAGTCTCTCAGTGACTCACTCTACGACTCGCTG...GGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433948.5
3UTR-3UTR CCA 90 bp AGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAAGCCGGTCCAGTCTGTaGTCCCCAGCTCCAGCGGGG +
Preference number: 2 (lower is better)
Translates to: RDWRAATQWPLTPSPFQESRSSL*SPAPAG
Trigger: CCCCGCTGGAGCTGGGGACCACAGACTGGACCGGCT...TTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
3UTR-3UTR TCA 90 bp CACCACAAGATGGCTCAGCCTGAAGTAGGGACTGGAGGGCTGCGACACAGTGGCTCCGGGGGCTGGGCATaGAGAGAGCCGGTCCAGTCT +
Preference number: 2 (lower is better)
Translates to: HHKMAQPEVGTGGLRHSGSGGWA*REPVQS
Trigger: AGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGA...GCCACTGTGTCGCAGCCCTCCAGTCCCTACTTCAGGCTGAGCCATCTTGTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
3UTR-3UTR TCA 90 bp CTGCTCCAGAGGGGGCCCAAGGTGGGGTATACTTCAGAGGAAACAGGCTGGAGGTCCGGGGGCTGGGCATaGAGAGAGCCGGTCCAGTCT +
Preference number: 2 (lower is better)
Translates to: LLQRGPKVGYTSEETGWRSGGWA*REPVQS
Trigger: AGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGA...CCTCCAGCCTGTTTCCTCTGAAGTATACCCCACCTTGGGCCCCCTCTGGAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433948.5
3UTR-3UTR TCA 90 bp AGTAGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGGCGGGGTCTCTCCCTaGGCTGAGCACGGTCATCTC +
Preference number: 2 (lower is better)
Translates to: SRDWRAATQWPLTPSPFQGGVSP*AEHGHL
Trigger: GAGATGACCGTGCTCAGCTCAGGGAGAGACCCCGCC...CTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCTACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
3UTR-3UTR CCA 90 bp GACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGCGGGTTGGGCAGAGATaGCACGGCTGGTGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: DWRAATQWPLTPSPFQEERVGQR*HGWWAG
Trigger: TCCTGCCCACCAGCCGTGCCATCTCTGCCCAACCCG...CTCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
3UTR-3UTR TCA 90 bp GGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGGTCTCTCCCTGAGCTaGGCACGGTCATCTCATCCG +
Preference number: 2 (lower is better)
Translates to: GLEGCDTVAFNPQSLPGRGLSLS*ARSSHP
Trigger: CGGATGAGATGACCGTGCTCAGCTCAGGGAGAGACC...TCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
3UTR-3UTR GCA 90 bp GGGGGCCTCCACATTTTATTAGGGATACGGCAGAAGCAGAGGCAGGAAGCAGAGCCCCGCTGGCCACTCTaGCTTCCTCGGCCATGTCCG +
Preference number: 2 (lower is better)
Translates to: GGLHILLGIRQKQRQEAEPRWPL*LPRPCP
Trigger: CGGACATGGCCGAGGAAGGCAGAGTGGCCAGCGGGG...CTCTGCTTCCTGCCTCTGCTTCTGCCGTATCCCTAATAAAATGTGGAGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433948.5
3UTR-3UTR CCA 90 bp TTTAACCCCCAGTCCCTTCCAGGAAGAGCCTTACTCTGGGTGAGAGAAGGGACCCGCCGAAGCAGTGGGTaGTGGGGTGTGCCAGGGACC +
Preference number: 2 (lower is better)
Translates to: FNPQSLPGRALLWVREGTRRSSG*WGVPGT
Trigger: GGTCCCTGGCACACCCCACCACCCACTGCTTCGGCG...GGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCCTGGAAGGGACTGGGGGTTAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
3UTR-3UTR TCA 90 bp AGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGCCTTACCGTAGAGTGAGTCACTaGGAGACTCCGAGGTCTCCA +
Preference number: 2 (lower is better)
Translates to: RAATQWPLTPSPFQEEPYRRVSH*ETPRSP
Trigger: TGGAGACCTCGGAGTCTCTCAGTGACTCACTCTACG...GTAAGGCTCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433948.5
3UTR-3UTR CCA 90 bp AGTAGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGAGTCCTACAAGGTTCTaGGGAGGGACAGAAACCTTT +
Preference number: 2 (lower is better)
Translates to: SRDWRAATQWPLTPSPFQSPTRF*GGTETF
Trigger: AAAGGTTTCTGTCCCTCCCCAGAACCTTGTAGGACT...CTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433948.5
3UTR CCA 72 bp GGGCCCTGGGGCGTAGGGGACGGGCGGCTGGGCTCCTaGCTTCGCTTCCGGTCCACGGGCAGGGCCTGGGAA +
Preference number: 3 (lower is better)
Translates to: GPWGVGDGRLGS*LRFRSTGRAWE
Trigger: TTCCCAGGCCCTGCCCGTGGACCGGAAGCGAAGCCAGGAGCCCAGCCGCCCGTCCCCTACGCCCCAGGGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433948.5
3UTR GCA 72 bp CGCTGGCCACTCTGCCTTCCTCGGCCATGTCCGAAGTaGTGGGGGTGCGGCTACCCCCGAAAGGTGGGCCCT +
Preference number: 3 (lower is better)
Translates to: RWPLCLPRPCPK*WGCGYPRKVGP
Trigger: AGGGCCCACCTTTCGGGGGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGGCAGAGTGGCCAGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433948.5
3UTR CCA 72 bp TGGCCACTCTGCCTTCCTCGGCCATGTCCGAAGTGCTaGGGGTGCGGCTACCCCCGAAAGGTGGGCCCTGGG +
Preference number: 3 (lower is better)
Translates to: WPLCLPRPCPKC*GCGYPRKVGPG
Trigger: CCCAGGGCCCACCTTTCGGGGGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGGCAGAGTGGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433948.5
3UTR-3UTR CAA 90 bp AGCTCCAGCGGGGCCGTGGCGTGGCGCAGCCCCTCAGCCCTGACTCCCACAAGATATCCACCTGCCTCCTaGGTCCCTTCAGGGAGGGGT +
Preference number: 3 (lower is better)
Translates to: SSSGAVAWRSPSALTPTRYPPAS*VPSGRG
Trigger: ACCCCTCCCTGAAGGGACCAAGGAGGCAGGTGGATA...TCTTGTGGGAGTCAGGGCTGAGGGGCTGCGCCACGCCACGGCCCCGCTGGAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433948.5
3UTR TCA 72 bp GAGAGAAGGGACCAAGGGCGGGGTCTCTCCCTGAGCTaGGCACGGTCATCTCATCCGCCGAAGCAGTGGGTG +
Preference number: 3 (lower is better)
Translates to: ERRDQGRGLSLS*ARSSHPPKQWV
Trigger: CACCCACTGCTTCGGCGGATGAGATGACCGTGCTCAGCTCAGGGAGAGACCCCGCCCTTGGTCCCTTCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
3UTR CCA 72 bp AAACCTTTCCCCACGAGAGAAGTGCAAGGAGGGCAGTaGGGAGGGCCGCTCACAGGGCATCCCAGGGGTCCT +
Preference number: 3 (lower is better)
Translates to: KPFPTREVQGGQ*GGPLTGHPRGP
Trigger: AGGACCCCTGGGATGCCCTGTGAGCGGCCCTCCCCACTGCCCTCCTTGCACTTCTCTCGTGGGGAAAGGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433948.5
3UTR TCA 72 bp TGGGCAGGAAGCCCAGCACCACAAGATGGCTCAGCCTaGAGTAGGGACTGGAGGGCTGCGACACAGTGGCCT +
Preference number: 3 (lower is better)
Translates to: WAGSPAPQDGSA*SRDWRAATQWP
Trigger: AGGCCACTGTGTCGCAGCCCTCCAGTCCCTACTTCAGGCTGAGCCATCTTGTGGTGCTGGGCTTCCTGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
3UTR-3UTR CAA 90 bp AGTAGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGTATCCACCTGCCTCCTaGGTCCCTTCAGGGAGGGGT +
Preference number: 3 (lower is better)
Translates to: SRDWRAATQWPLTPSPFQYPPAS*VPSGRG
Trigger: ACCCCTCCCTGAAGGGACCAAGGAGGCAGGTGGATA...CTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
3UTR CCA 72 bp GAGCACGGTCATCTCATCCGCCGAAGCAGTGGGTGGTaGGGTGTGCCAGGGACCCCCTTTTCACCTTCTTAT +
Preference number: 3 (lower is better)
Translates to: EHGHLIRRSSGW*GVPGTPFSPSY
Trigger: ATAAGAAGGTGAAAAGGGGGTCCCTGGCACACCCCACCACCCACTGCTTCGGCGGATGAGATGACCGTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp CTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGGGGGGAGCTGGGGACTaGGCTGCGGGCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LHQHGGLQEGLARASGQRGGAGD*AAGLLG
Trigger: GCCCAGGAGGCCCGCAGCTCAGTCCCCAGCTCCCCC...CCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAG
77% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGCCAGGGGCTCGCTCCTaGCCCTGGAGCCGCAGCACG +
Preference number: 4 (lower is better)
Translates to: LHQHGGLQEGLARASGQRPGARS*PWSRST
Trigger: CGTGCTGCGGCTCCAGGGCCAGGAGCGAGCCCCTGG...CCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CCTGGCCCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCGCCGTTGATGGGCTCTaGGGAGCCAGGCCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: PGPQTPPARGPPGGPREGAVDGL*GARPLA
Trigger: GGCCAGGGGCCTGGCTCCCCAGAGCCCATCAACGGC...GCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGGGCCAGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR CCA 90 bp CCTGGCCCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCGTCCTGCGGCCGGGATaGGGAGACTCCGAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: PGPQTPPARGPPGGPREGVLRPG*GDSEPA
Trigger: GGCAGGCTCGGAGTCTCCCCATCCCGGCCGCAGGAC...GCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGGGCCAGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp CTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGCTGGTGCCCTGGGCCTaGGGAGGTCCCCTGCTAGGA +
Preference number: 4 (lower is better)
Translates to: LHQHGGLQEGLARASGQRLVPWA*GGPLLG
Trigger: TCCTAGCAGGGGACCTCCTCAGGCCCAGGGCACCAG...CCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR GCA 90 bp CTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGCCCGGGTCTTTTCGGTaGCAGGCCTGGCTGGCACCC +
Preference number: 4 (lower is better)
Translates to: LHQHGGLQEGLARASGQRPGSFR*QAWLAP
Trigger: GGGTGCCAGCCAGGCCTGGCACCGAAAAGACCCGGG...CCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp CCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGAGCTGGCCCTGCACCTaGCCCAGCCCCGTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: PQTPPARGPPGGPREGFGSWPCT*PSPVLG
Trigger: GCCCAACACGGGGCTGGGGCAGGTGCAGGGCCAGCT...CCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp CAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCAGCGCTGGCATGCTGGGGTaGCGCCCACTCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QHGGLQEGLARASGQRSSAGMLG*RPLTSS
Trigger: GCTGCTGGTGAGTGGGCGGCACCCCAGCATGCCAGC...GCTGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp CCTGGCCCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCCGGCCATGTCCGAAGTaGTGGGGGTGCGGCTACCCC +
Preference number: 4 (lower is better)
Translates to: PGPQTPPARGPPGGPREGRPCPK*WGCGYP
Trigger: GGGGTAGCCGCACCCCCAGCACTTCGGACATGGCCG...GCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGGGCCAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCAGCGTGGTCCCCATTGAGTaGGCCTGCAGCCCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: QHGGLQEGLARASGQRSSVVPIE*ACSPGQ
Trigger: CTGGCCGGGGCTGCAGGCCCACTCAATGGGGACCAC...GCTGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGCCGAAGCCTGGCCTGTaGGCCTCTGGGGTACCCCCA +
Preference number: 4 (lower is better)
Translates to: LHQHGGLQEGLARASGQRPKPGL*ASGVPP
Trigger: TGGGGGTACCCCAGAGGCCCACAGGCCAGGCTTCGG...CCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCAGCAGCAGGGTGAAGGGCTaGTGGGCAGGCCTTGCGCCC +
Preference number: 4 (lower is better)
Translates to: QHGGLQEGLARASGQRSSSRVKG*WAGLAP
Trigger: GGGCGCAAGGCCTGCCCACCAGCCCTTCACCCTGCT...GCTGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGGCTCGCTCCTGGCCCTaGAGCCGCAGCACGTTCTCC +
Preference number: 4 (lower is better)
Translates to: LHQHGGLQEGLARASGQRARSWP*SRSTFS
Trigger: GGAGAACGTGCTGCGGCTCCAGGGCCAGGAGCGAGC...CCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGTCTCATGGCCCCGGTaGCCCGGAGCAGCGGGTAGC +
Preference number: 4 (lower is better)
Translates to: PQTPPARGPPGGPREGFGVSWPR*PGAAGS
Trigger: GCTACCCGCTGCTCCGGGCCACCGGGGCCATGAGAC...CCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp CAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCAGCCTGACTGCGGGGGTCTaGGCTGTGTGGAGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: QHGGLQEGLARASGQRSSLTAGV*AVWSLG
Trigger: CCCCAGACTCCACACAGCTCAGACCCCCGCAGTCAG...GCTGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp CCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGCCCAGGTCGCCGTCCTaGCCCCTGGCTGGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: PQTPPARGPPGGPREGFGPRSPS*PLAGLL
Trigger: AAGAAGCCCAGCCAGGGGTCAGGACGGCGACCTGGG...CCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp CAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCAGCTGGGGGACTCCTTGGTaGCTAGCGGAGCCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: QHGGLQEGLARASGQRSSWGTPW*LAEPQV
Trigger: GACCTGGGGCTCCGCTAGTCACCAAGGAGTCCCCCA...GCTGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp CTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGCTTCTCCTCGATGGCTaGGTGTGGGGCCAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: LHQHGGLQEGLARASGQRLLLDG*VWGQPL
Trigger: GAGGGGCTGGCCCCACACTCAGCCATCGAGGAGAAG...CCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp CAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCAGCGGTTTTCCGCAGCCCTaGAGAGGGCCCACCAGGCCA +
Preference number: 4 (lower is better)
Translates to: QHGGLQEGLARASGQRSSGFPQP*RGPTRP
Trigger: TGGCCTGGTGGGCCCTCTTCAGGGCTGCGGAAAACC...GCTGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp GTAGGGGACGGGCGGCTGGGCTCCTGGCTTCGCTTCCGGTCCACGGGCAGGGCCGGTTTTCCGCAGCCCTaGAGAGGGCCCACCAGGCCA +
Preference number: 4 (lower is better)
Translates to: VGDGRLGSWLRFRSTGRAGFPQP*RGPTRP
Trigger: TGGCCTGGTGGGCCCTCTTCAGGGCTGCGGAAAACC...GGCCCTGCCCGTGGACCGGAAGCGAAGCCAGGAGCCCAGCCGCCCGTCCCCTAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR TCA 90 bp CTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGTCCGGGGGCTGGGCATaGAGAGAGCCGGTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: LHQHGGLQEGLARASGQRSGGWA*REPVQS
Trigger: AGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGA...CCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp CCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGCTCTGCCCAGCACAGTaGCCCAGAGGCAGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: PQTPPARGPPGGPREGFGLCPAQ*PRGSGA
Trigger: TGCCCCGCTGCCTCTGGGGCACTGTGCTGGGCAGAG...CCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR GCA 90 bp CTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGCTGCTGGTGTTGCGGTaGTTGACCTCGGCGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LHQHGGLQEGLARASGQRLLVLR*LTSAPG
Trigger: CCCTGGCGCCGAGGTCAAGCACCGCAACACCAGCAG...CCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp GTAGGGGACGGGCGGCTGGGCTCCTGGCTTCGCTTCCGGTCCACGGGCAGGGCCCTGCTGGTGTTGCGGTaGTTGACCTCGGCGCCAGGG +
Preference number: 4 (lower is better)
Translates to: VGDGRLGSWLRFRSTGRALLVLR*LTSAPG
Trigger: CCCTGGCGCCGAGGTCAAGCACCGCAACACCAGCAG...GGCCCTGCCCGTGGACCGGAAGCGAAGCCAGGAGCCCAGCCGCCCGTCCCCTAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR GCA 90 bp CAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCAGCCAGGGAAGGCTGGCATaGTGGGGTGCCGCCCACTCA +
Preference number: 4 (lower is better)
Translates to: QHGGLQEGLARASGQRSSQGRLA*WGAAHS
Trigger: TGAGTGGGCGGCACCCCAGCATGCCAGCCTTCCCTG...GCTGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGGCAGGGTGTCGGGGCTaGGTGCCTCATTGGGGTCAC +
Preference number: 4 (lower is better)
Translates to: LHQHGGLQEGLARASGQRAGCRG*VPHWGH
Trigger: GTGACCCCAATGAGGCACCCAGCCCCGACACCCTGC...CCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGTGGTCCCCATTGAGTaGGCCTGCAGCCCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: PQTPPARGPPGGPREGFGVVPIE*ACSPGQ
Trigger: CTGGCCGGGGCTGCAGGCCCACTCAATGGGGACCAC...CCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CCTGGCCCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCCCCCGTACTCAGGCTTaGGCTCCCGCCAGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: PGPQTPPARGPPGGPREGPRTQA*APASSW
Trigger: CCAAGAGCTGGCGGGAGCCCAAGCCTGAGTACGGGG...GCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGGGCCAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CCTGGCCCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCCTCTTCCCGCCTCCCTaGCTCGCTGCTCGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: PGPQTPPARGPPGGPREGLFPPP*LAARLS
Trigger: GGAAAGCCGAGCAGCGAGCCAGGGAGGCGGGAAGAG...GCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGGGCCAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCAGCGGAAGGCTGGCATGCTaGGGTGCCGCCCACTCACCA +
Preference number: 4 (lower is better)
Translates to: QHGGLQEGLARASGQRSSGRLAC*GAAHSP
Trigger: TGGTGAGTGGGCGGCACCCCAGCATGCCAGCCTTCC...GCTGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCAGCCCATGTCCGAAGTGCTaGGGGTGCGGCTACCCCCGA +
Preference number: 4 (lower is better)
Translates to: QHGGLQEGLARASGQRSSPCPKC*GCGYPR
Trigger: TCGGGGGTAGCCGCACCCCCAGCACTTCGGACATGG...GCTGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp GGGGGCCCCCGCTGGCCACTCTGCCTTCCTCGGCCATGTCCGAAGTGCTGGGGGGGTTGTGTAGCAGGGTaGAGGGCTGGTGGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: GGPRWPLCLPRPCPKCWGGCVAG*RAGGQA
Trigger: GGCCTGCCCACCAGCCCTTCACCCTGCTACACAACC...CCCCCAGCACTTCGGACATGGCCGAGGAAGGCAGAGTGGCCAGCGGGGGCCCCC
71% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR GCA 90 bp CCTGGCCCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCGCTTCTTGGATGAGTTaGCTGGGGTCCTGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: PGPQTPPARGPPGGPREGASWMS*LGSCGR
Trigger: CCGGCCGCAGGACCCCAGGCAACTCATCCAAGAAGC...GCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGGGCCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp GCTGGCCACTCTGCCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCGGGGCACAGGGCCCCTaGCAGCCGGCTCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: AGHSAFLGHVRSAGGAATGAQGP*QPALGQ
Trigger: CTGGCCAAGAGCCGGCTGGCAGGGGCCCTGTGCCCC...GGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGGCAGAGTGGCCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR GCA 90 bp CCTGGCCCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTCTTGGTGGCCTCTGTaGGGCGGTTCAGCGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PGPQTPPARGPPGGPREGSWWPL*GGSALA
Trigger: TGCCAGCGCTGAACCGCCGCACAGAGGCCACCAAGA...GCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGGGCCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp CCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGTGGCCGGGCCCGGCTaGTTAGGTAGGCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PQTPPARGPPGGPREGFGVAGPG*LGRPSP
Trigger: AGGAGAAGGCCTACCTAAGCAGCCGGGCCCGGCCAC...CCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp CCTGGCCCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCGCCTCCCTGGCTCGCTaGTCGGCTTTCCAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: PGPQTPPARGPPGGPREGASLAR*SAFQEV
Trigger: AACCTCCTGGAAAGCCGAGCAGCGAGCCAGGGAGGC...GCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGGGCCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGTTTGGGCCAGAGCTaGTGCCCTGGGCCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: LHQHGGLQEGLARASGQRSLGQS*CPGPEE
Trigger: CTCCTCAGGCCCAGGGCACCAGCTCTGGCCCAAACT...CCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR CCA 90 bp GTAGGGGACGGGCGGCTGGGCTCCTGGCTTCGCTTCCGGTCCACGGGCAGGGCCGGAGGAGCTGCTGCCTaGGGCACAGTTTGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: VGDGRLGSWLRFRSTGRAGGAAA*GTVWAR
Trigger: TCTGGCCCAAACTGTGCCCCAGGCAGCAGCTCCTCC...GGCCCTGCCCGTGGACCGGAAGCGAAGCCAGGAGCCCAGCCGCCCGTCCCCTAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CCA 90 bp CTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGTGCCCAGGACCTGGGTaGTCCCCATTGAGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LHQHGGLQEGLARASGQRCPGPG*SPLSGP
Trigger: AGGCCCACTCAATGGGGACCACCCAGGTCCTGGGCA...CCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGAGGCCGAGAGCCCAGTaGGGCATCCCCAGCACCCAT +
Preference number: 4 (lower is better)
Translates to: PQTPPARGPPGGPREGFGRPRAQ*GIPSTH
Trigger: ATGGGTGCTGGGGATGCCCCACTGGGCTCTCGGCCT...CCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp ACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCAGGTGGGCACCTGCAGTaGGGATGGAGGTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: TSTGASRRASRGLRGRGAGGHLQ*GWRWLW
Trigger: CCAGAGCCACCTCCATCCCCACTGCAGGTGCCCACC...TGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGGTGGGCACCTGCAGTaGGGATGGAGGTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PQTPPARGPPGGPREGFGGGHLQ*GWRWLW
Trigger: CCAGAGCCACCTCCATCCCCACTGCAGGTGCCCACC...CCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGCTCTTCCCGCCTCCCTaGCTCGCTGCTCGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: PQTPPARGPPGGPREGFGLFPPP*LAARLS
Trigger: GGAAAGCCGAGCAGCGAGCCAGGGAGGCGGGAAGAG...CCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GGGGGCCCCCGCTGGCCACTCTGCCTTCCTCGGCCATGTCCGAAGTGCTGGGGGGGAAGGCTGGCATGCTaGGGTGCCGCCCACTCACCA +
Preference number: 4 (lower is better)
Translates to: GGPRWPLCLPRPCPKCWGGRLAC*GAAHSP
Trigger: TGGTGAGTGGGCGGCACCCCAGCATGCCAGCCTTCC...CCCCCAGCACTTCGGACATGGCCGAGGAAGGCAGAGTGGCCAGCGGGGGCCCCC
71% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CCA 90 bp CCTGGCCCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCCAGAGATGGCACGGCTaGTGGGCAGGAAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: PGPQTPPARGPPGGPREGQRWHG*WAGSPA
Trigger: TGCTGGGCTTCCTGCCCACCAGCCGTGCCATCTCTG...GCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGGGCCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp GGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCCGGTGAGGGTTCAGGCTaGGGCGGGCCACACAGCTCG +
Preference number: 4 (lower is better)
Translates to: GPRLRGLGMKRAGPVCGPGEGSG*GGPHSS
Trigger: CGAGCTGTGTGGCCCGCCTCAGCCTGAACCCTCACC...GGGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR TCA 90 bp CCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCTGGGCTTCTTGGATaGGTTGCCTGGGGTCCTGCG +
Preference number: 4 (lower is better)
Translates to: PQTPPARGPPGGPREGFGAGLLG*VAWGPA
Trigger: CGCAGGACCCCAGGCAACTCATCCAAGAAGCCCAGC...CCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp CAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCAGCAAGTGCCGAGTTCTCTaGCTCCAGCTCCCGCAGTCG +
Preference number: 4 (lower is better)
Translates to: QHGGLQEGLARASGQRSSKCRVL*LQLPQS
Trigger: CGACTGCGGGAGCTGGAGGCAGAGAACTCGGCACTT...GCTGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR GCA 90 bp ACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCACCAGGTTCAACTGTCTaGGGGCCAGGGCACCGAGCA +
Preference number: 4 (lower is better)
Translates to: TSTGASRRASRGLRGRGAPGSTV*GPGHRA
Trigger: TGCTCGGTGCCCTGGCCCGCAGACAGTTGAACCTGG...TGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp GGGGGCCCCCGCTGGCCACTCTGCCTTCCTCGGCCATGTCCGAAGTGCTGGGGGGCTTCTTGGATGAGTTaGCTGGGGTCCTGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: GGPRWPLCLPRPCPKCWGASWMS*LGSCGR
Trigger: CCGGCCGCAGGACCCCAGGCAACTCATCCAAGAAGC...CCCCCAGCACTTCGGACATGGCCGAGGAAGGCAGAGTGGCCAGCGGGGGCCCCC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR GCA 90 bp CCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGGTACTACCACAGTCTaGCCAGGGAGGGCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: PQTPPARGPPGGPREGFGGTTTV*PGRALP
Trigger: GGGAAGGGCCCTCCCTGGGCAGACTGTGGTAGTACC...CCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp CAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCAGCCTGCACCTTGGTACATaGCAGCCAGCTGGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: QHGGLQEGLARASGQRSSLHLGT*QPAGPA
Trigger: TGCAGGGCCAGCTGGCTGGCATGTACCAAGGTGCAG...GCTGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp GGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCCCCCCGCTGGCCACTCTaGCTTCCTCGGCCATGTCCG +
Preference number: 4 (lower is better)
Translates to: GPRLRGLGMKRAGPVCGPPRWPL*LPRPCP
Trigger: CGGACATGGCCGAGGAAGGCAGAGTGGCCAGCGGGG...GGGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACC
70% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CCTGGCCCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCGGCTGGGTGCCTCATTaGGGTCACCTGCCTCATCAG +
Preference number: 4 (lower is better)
Translates to: PGPQTPPARGPPGGPREGGWVPH*GHLPHQ
Trigger: CTGATGAGGCAGGTGACCCCAATGAGGCACCCAGCC...GCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGGGCCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GGGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCTGGCCTGTGGGCCTCTaGGGTACCCCCACCCCAAGC +
Preference number: 4 (lower is better)
Translates to: GSPSPGAGHEESRSSLWSWPVGL*GTPTPS
Trigger: GCTTGGGGTGGGGGTACCCCAGAGGCCCACAGGCCA...GGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCAGCCTTGAGACCCCTAGCTaGAGAGGGCAGAAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: QHGGLQEGLARASGQRSSLETPS*RGQKGS
Trigger: GGACCCCTTCTGCCCTCTCCAGCTAGGGGTCTCAAG...GCTGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GGGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCGAGTTCCGGGGGAGCTaGGGACTGAGCTGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: GSPSPGAGHEESRSSLWSEFRGS*GLSCGP
Trigger: AGGCCCGCAGCTCAGTCCCCAGCTCCCCCGGAACTC...GGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCCAGGGTGAAGGGCTGGTaGGCAGGCCTTGCGCCCCCT +
Preference number: 4 (lower is better)
Translates to: GPRLRGLGMKRAGPVCGPRVKGW*AGLAPP
Trigger: AGGGGGCGCAAGGCCTGCCCACCAGCCCTTCACCCT...GGGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CCTGGCCCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCGGATGGAGGTGGCTCTaGGGAAGGCCCCCTAAAGGT +
Preference number: 4 (lower is better)
Translates to: PGPQTPPARGPPGGPREGGWRWL*GRPPKG
Trigger: ACCTTTAGGGGGCCTTCCCCAGAGCCACCTCCATCC...GCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGGGCCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp ACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCACGCCGTCCTGACCCCTaGCTGGGCTTCTTGGATGAG +
Preference number: 4 (lower is better)
Translates to: TSTGASRRASRGLRGRGARRPDP*LGFLDE
Trigger: CTCATCCAAGAAGCCCAGCCAGGGGTCAGGACGGCG...TGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGTGGAAGGGAGCTTGGTaGGGCTGCTGTGAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: LHQHGGLQEGLARASGQRWKGAW*GCCEGS
Trigger: AGAGCCCTCACAGCAGCCCCACCAAGCTCCCTTCCA...CCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCAGCCCTGACTTGGGTCAGTaGGGCCAGGTACTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: QHGGLQEGLARASGQRSSPDLGQ*GQVLGV
Trigger: CACCCCTAGTACCTGGCCCCACTGACCCAAGTCAGG...GCTGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CCTGGCCCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCGTCCCACTGCTACCATaGTCTGGGGGTGGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: PGPQTPPARGPPGGPREGVPLLP*SGGGKV
Trigger: GACCTTCCCACCCCCAGACCATGGTAGCAGTGGGAC...GCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGGGCCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GGGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCTCCCGCTCCAGTGTGTaGGCGCGGCGGGGGACTTTG +
Preference number: 4 (lower is better)
Translates to: GSPSPGAGHEESRSSLWSSRSSV*ARRGTL
Trigger: CAAAGTCCCCCGCCGCGCCCACACACTGGAGCGGGA...GGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CCTGGCCCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCCAGCTCCTCTATGCCTaGCACCTCCCGCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: PGPQTPPARGPPGGPREGQLLYA*HLPLQC
Trigger: ACACTGGAGCGGGAGGTGCCAGGCATAGAGGAGCTG...GCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGGGCCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GGGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCCAGTGCAGGGAAGGCTaGCATGCTGGGGTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: GSPSPGAGHEESRSSLWSQCREG*HAGVPP
Trigger: GGGCGGCACCCCAGCATGCCAGCCTTCCCTGCACTG...GGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCAGCGGAAGGTCCAGTTCTTaGCCAGCTGGACAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: QHGGLQEGLARASGQRSSGRSSS*PAGQEG
Trigger: CCCCTCCTGTCCAGCTGGCCAAGAACTGGACCTTCC...GCTGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGCTCCAGTTGTCGGGGTaGGCACATGAGAGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: LHQHGGLQEGLARASGQRLQLSG*AHERVR
Trigger: TCGGACCCTCTCATGTGCCCACCCCGACAACTGGAG...CCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp AGCTCCAGCGGGGCCGTGGCGTGGCGCAGCCCCTCAGCCCTGACTCCCACAAGACCATGTCCGAAGTGCTaGGGGTGCGGCTACCCCCGA +
Preference number: 4 (lower is better)
Translates to: SSSGAVAWRSPSALTPTRPCPKC*GCGYPR
Trigger: TCGGGGGTAGCCGCACCCCCAGCACTTCGGACATGG...TCTTGTGGGAGTCAGGGCTGAGGGGCTGCGCCACGCCACGGCCCCGCTGGAGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CCA 90 bp AGCTCCAGCGGGGCCGTGGCGTGGCGCAGCCCCTCAGCCCTGACTCCCACAAGACGGGTTGGGCAGAGATaGCACGGCTGGTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SSSGAVAWRSPSALTPTRRVGQR*HGWWAG
Trigger: TCCTGCCCACCAGCCGTGCCATCTCTGCCCAACCCG...TCTTGTGGGAGTCAGGGCTGAGGGGCTGCGCCACGCCACGGCCCCGCTGGAGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CCA 90 bp AGGAGGGCAGTGGGGAGGGCCGCTCACAGGGCATCCCAGGGGTCCTCCTCCCAGGAGGAGCAGCCGGGTTaGGCAGAGATGGCACGGCTG +
Preference number: 4 (lower is better)
Translates to: RRAVGRAAHRASQGSSSQEEQPG*AEMARL
Trigger: CAGCCGTGCCATCTCTGCCCAACCCGGCTGCTCCTC...CTGGGAGGAGGACCCCTGGGATGCCCTGTGAGCGGCCCTCCCCACTGCCCTCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CCA 90 bp ACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCACAGACCCCAAAGGCATaGGGCAGAGGAGGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: TSTGASRRASRGLRGRGAQTPKA*GRGGQH
Trigger: GTGCTGCCCTCCTCTGCCCCATGCCTTTGGGGTCTG...TGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp GGGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCCACACAGCTCGCCGTTaGTGGGCTCTGGGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GSPSPGAGHEESRSSLWSHTARR*WALGSQ
Trigger: CTGGCTCCCCAGAGCCCATCAACGGCGAGCTGTGTG...GGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR TCA 90 bp CCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCCCCGAAAGGTGGGGGAGGGGCTGCCGTCTaGGCCACTGTTCCGACAGGG +
Preference number: 4 (lower is better)
Translates to: PSSAMSEVLGVRLPPKGGGGAAV*ATVPTG
Trigger: CCCTGTCGGAACAGTGGCTCAGACGGCAGCCCCTCC...CCCACCTTTCGGGGGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR TCA 90 bp CAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCAGCCCAGCTCCACTTTGGTaGGGCAGCTCCTTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: QHGGLQEGLARASGQRSSPAPLW*GSSLVR
Trigger: TCTCACCAAGGAGCTGCCTCACCAAAGTGGAGCTGG...GCTGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp GGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCCGCCCAGGCTTGGGGCTaGGGTTGGCACTTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GPRLRGLGMKRAGPVCGPAQAWG*GWHFGR
Trigger: CCTGCCAAAGTGCCAACCTCAGCCCCAAGCCTGGGC...GGGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp CCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGAAGCTCCTGGCAGGTaGCTGGCTCCATGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: PQTPPARGPPGGPREGFGEAPGR*LAPCCH
Trigger: ATGGCAGCATGGAGCCAGGCACCTGCCAGGAGCTTC...CCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR GCA 90 bp CCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCCCCGAAAGGTGGGCCCGCAGAGGTGTGCTaGCAGGATCCCCAGGTCGCC +
Preference number: 4 (lower is better)
Translates to: PSSAMSEVLGVRLPPKGGPAEVC*QDPQVA
Trigger: GGCGACCTGGGGATCCTGGCAGCACACCTCTGCGGG...CCCACCTTTCGGGGGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR GCA 90 bp GTAGGGGACGGGCGGCTGGGCTCCTGGCTTCGCTTCCGGTCCACGGGCAGGGCCGGAGCTTGGTGGGGCTaGTGTGAGGGCTCTTATTGG +
Preference number: 4 (lower is better)
Translates to: VGDGRLGSWLRFRSTGRAGAWWG*CEGSYW
Trigger: CCAATAAGAGCCCTCACAGCAGCCCCACCAAGCTCC...GGCCCTGCCCGTGGACCGGAAGCGAAGCCAGGAGCCCAGCCGCCCGTCCCCTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR GCA 90 bp CCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGCGAACCAGCTGGCGATaGTGCTGGTGTTGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: PQTPPARGPPGGPREGFGRTSWR*CWCCGA
Trigger: AGCACCGCAACACCAGCAGCATCGCCAGCTGGTTCG...CCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp ACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCACTTCTCCTCTTCCAGTaGCCGACGCAGGTCTTCCGC +
Preference number: 4 (lower is better)
Translates to: TSTGASRRASRGLRGRGALLLFQ*PTQVFR
Trigger: GCGGAAGACCTGCGTCGGGCACTGGAAGAGGAGAAG...TGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp GCCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCCCCGAAAGGTGGGCTGGCATGCTGGGGTaGCGCCCACTCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: AFLGHVRSAGGAATPERWAGMLG*RPLTSS
Trigger: GCTGCTGGTGAGTGGGCGGCACCCCAGCATGCCAGC...CCACCTTTCGGGGGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR GCA 90 bp CCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGCGAGGAGCTGCCGGCTaGCCTAGTATTGGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: PQTPPARGPPGGPREGFGRGAAG*PSIGEG
Trigger: ACCTTCCCCAATACTAGGGCAGCCGGCAGCTCCTCG...CCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGCCCGCTGGTTTTCGTTaGCCTGGGCAAGTGCCGAGT +
Preference number: 4 (lower is better)
Translates to: PQTPPARGPPGGPREGFGPAGFR*PGQVPS
Trigger: ACTCGGCACTTGCCCAGGCCAACGAAAACCAGCGGG...CCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR CCA 90 bp GGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCCGGCCTGGGGACAGCGTaGTGGACAAGGCTGACTGCG +
Preference number: 4 (lower is better)
Translates to: GPRLRGLGMKRAGPVCGPGLGTA*WTRLTA
Trigger: CGCAGTCAGCCTTGTCCACCACGCTGTCCCCAGGCC...GGGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCAGCTTAGCTGTGGGTAGGTaGGCACCTGCAGTGGGGATG +
Preference number: 4 (lower is better)
Translates to: QHGGLQEGLARASGQRSSLAVGR*APAVGM
Trigger: CATCCCCACTGCAGGTGCCCACCTACCCACAGCTAA...GCTGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CACTCTGCCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCCCCGAAGTCCTGCGGCCGGGATaGGGAGACTCCGAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: HSAFLGHVRSAGGAATPEVLRPG*GDSEPA
Trigger: GGCAGGCTCGGAGTCTCCCCATCCCGGCCGCAGGAC...TTCGGGGGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGGCAGAGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CCA 90 bp CCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGCCTGGCTGGGCTTCTTaGATGAGTTGCCTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: PQTPPARGPPGGPREGFGPGWAS*MSCLGS
Trigger: GGACCCCAGGCAACTCATCCAAGAAGCCCAGCCAGG...CCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCAGCCTGAGGTTGGCACTTTaGCAGGGGTACGGGGTACCT +
Preference number: 4 (lower is better)
Translates to: QHGGLQEGLARASGQRSSLRLAL*QGYGVP
Trigger: AGGTACCCCGTACCCCTGCCAAAGTGCCAACCTCAG...GCTGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp ACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCAGTGTGGACTGGGCCGTaGTACTACCACAGTCTGCCC +
Preference number: 4 (lower is better)
Translates to: TSTGASRRASRGLRGRGAVWTGP*YYHSLP
Trigger: GGGCAGACTGTGGTAGTACCACGGCCCAGTCCACAC...TGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCCCCGAAAGGTGGGGCTCGCTCCTGGCCCTaGAGCCGCAGCACGTTCTCC +
Preference number: 4 (lower is better)
Translates to: PSSAMSEVLGVRLPPKGGARSWP*SRSTFS
Trigger: GGAGAACGTGCTGCGGCTCCAGGGCCAGGAGCGAGC...CCCACCTTTCGGGGGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CCA 90 bp ACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCACCGCCAGCTCTTGGATaGCAGCTCCTTGCCATCCAC +
Preference number: 4 (lower is better)
Translates to: TSTGASRRASRGLRGRGAPPALG*QLLAIH
Trigger: GTGGATGGCAAGGAGCTGCCATCCAAGAGCTGGCGG...TGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GCCACTCTGCCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCCCCGCCCCGTACTCAGGCTTaGGCTCCCGCCAGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: ATLPSSAMSEVLGVRLPPPRTQA*APASSW
Trigger: CCAAGAGCTGGCGGGAGCCCAAGCCTGAGTACGGGG...CGGGGGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGGCAGAGTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CCA 90 bp CCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGAGGAGGGGTGGGGCCTaGGTCTTCACAGGGATCATC +
Preference number: 4 (lower is better)
Translates to: PQTPPARGPPGGPREGFGRRGGA*VFTGII
Trigger: GATGATCCCTGTGAAGACCCAGGCCCCACCCCTCCT...CCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp TTCTTATCCACCTGCCTCCTTGGTCCCTTCAGGGAGGGGTCCCCGTCTCCGGGGCCACGGGCAGGGCCATaGGGGTCCTGGGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: FLSTCLLGPFREGSPSPGPRAGP*GSWAAP
Trigger: AGGGGCTGCCCAGGACCCCCATGGCCCTGCCCGTGG...CCCCGGAGACGGGGACCCCTCCCTGAAGGGACCAAGGAGGCAGGTGGATAAGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR CCA 90 bp CCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCCCCGAAAGGTGGGCGCCGAAGCAGTGGGTaGTGGGGTGTGCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: PSSAMSEVLGVRLPPKGGRRSSG*WGVPGT
Trigger: GGTCCCTGGCACACCCCACCACCCACTGCTTCGGCG...CCCACCTTTCGGGGGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CCA 90 bp GGGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCCGGGTTGGGCAGAGATaGCACGGCTGGTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GSPSPGAGHEESRSSLWSRVGQR*HGWWAG
Trigger: TCCTGCCCACCAGCCGTGCCATCTCTGCCCAACCCG...GGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp CAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCAGCCACCACCTTGGTTGGTaGCTTGGAAGGGAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: QHGGLQEGLARASGQRSSHHLGW*LGRELG
Trigger: ACCAAGCTCCCTTCCAAGTCACCAACCAAGGTGGTG...GCTGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp GCCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCCCCGAAAGGTGGTCCGGGCTTCCATCTTaGCTTCCCTCCGGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: AFLGHVRSAGGAATPERWSGLPS*LPSGAG
Trigger: CCCCGCTCCGGAGGGAAGTCAAGATGGAAGCCCGGA...CCACCTTTCGGGGGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR TCA 90 bp ACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCATCAGCTTGGAGATGTTaGGGCTCTCGGCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: TSTGASRRASRGLRGRGASAWRC*GSRPPA
Trigger: AGCTGGAGGCCGAGAGCCTCAACATCTCCAAGCTGA...TGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp CTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGCGTAGAGTGAGTCACTaGGAGACTCCGAGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LHQHGGLQEGLARASGQRRRVSH*ETPRSP
Trigger: TGGAGACCTCGGAGTCTCTCAGTGACTCACTCTACG...CCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp CCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCCCCGAAAGGTGGGGCAGCCCCTCAGCCCTaGCTCCCACAAGAGGACAGC +
Preference number: 4 (lower is better)
Translates to: PSSAMSEVLGVRLPPKGGAAPQP*LPQEDS
Trigger: GCTGTCCTCTTGTGGGAGTCAGGGCTGAGGGGCTGC...CCCACCTTTCGGGGGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR GCA 90 bp GGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCCAAGAGGCGCTCCCAGTaGAGCAGGCCTCCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: GPRLRGLGMKRAGPVCGPKRRSQ*SRPPRL
Trigger: CAACCTGGGAGGCCTGCTGCACTGGGAGCGCCTCTT...GGGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR GCA 90 bp GGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCCCCAGGTTCAACTGTCTaGGGGCCAGGGCACCGAGCA +
Preference number: 4 (lower is better)
Translates to: GPRLRGLGMKRAGPVCGPPGSTV*GPGHRA
Trigger: TGCTCGGTGCCCTGGCCCGCAGACAGTTGAACCTGG...GGGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp TTCTTATCCACCTGCCTCCTTGGTCCCTTCAGGGAGGGGTCCCCGTCTCCGGGGCTGGTGGGCAGGCCTTaGGCCCCCTCTGGGGACAGC +
Preference number: 4 (lower is better)
Translates to: FLSTCLLGPFREGSPSPGLVGRP*APSGDS
Trigger: GCTGTCCCCAGAGGGGGCGCAAGGCCTGCCCACCAG...CCCCGGAGACGGGGACCCCTCCCTGAAGGGACCAAGGAGGCAGGTGGATAAGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp GGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCCCCAGCAGCTCCTCTATaGCTGGCACCTCCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: GPRLRGLGMKRAGPVCGPPAAPL*LAPPAP
Trigger: TGGAGCGGGAGGTGCCAGGCATAGAGGAGCTGCTGG...GGGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CCTGGCCCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCCCTGTACCACATGGTTaGCAACCTCGTCCAGACAGC +
Preference number: 4 (lower is better)
Translates to: PGPQTPPARGPPGGPREGPVPHG*QPRPDS
Trigger: GCTGTCTGGACGAGGTTGCCAACCATGTGGTACAGG...GCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGGGCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR CCA 90 bp CCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCCCCGAAAGGTGGGAGGCCGAGAGCCCAGTaGGGCATCCCCAGCACCCAT +
Preference number: 4 (lower is better)
Translates to: PSSAMSEVLGVRLPPKGGRPRAQ*GIPSTH
Trigger: ATGGGTGCTGGGGATGCCCCACTGGGCTCTCGGCCT...CCCACCTTTCGGGGGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CCA 90 bp GGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCCCTGGGAGGCAAGGACTaGGGGGTACTCCAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: GPRLRGLGMKRAGPVCGPLGGKD*GVLQGF
Trigger: GAAGCCCTGGAGTACCCCCCAGTCCTTGCCTCCCAG...GGGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp ACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCATTTCGGTGCCAGGCCTaGCTGGCACCCCATTCTTCT +
Preference number: 4 (lower is better)
Translates to: TSTGASRRASRGLRGRGAFRCQA*LAPHSS
Trigger: AGAAGAATGGGGTGCCAGCCAGGCCTGGCACCGAAA...TGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GGGGGCCCCCGCTGGCCACTCTGCCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTTTCGGTGCCAGGCCTaGCTGGCACCCCATTCTTCT +
Preference number: 4 (lower is better)
Translates to: GGPRWPLCLPRPCPKCWGFRCQA*LAPHSS
Trigger: AGAAGAATGGGGTGCCAGCCAGGCCTGGCACCGAAA...CCCCCAGCACTTCGGACATGGCCGAGGAAGGCAGAGTGGCCAGCGGGGGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CCA 90 bp CCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGCCTTGGTTGGTGACTTaGAAGGGAGCTTGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: PQTPPARGPPGGPREGFGPWLVT*KGAWWG
Trigger: GCCCCACCAAGCTCCCTTCCAAGTCACCAACCAAGG...CCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCAGCGTCGAGGCACCACCTTaGTTGGTGACTTGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: QHGGLQEGLARASGQRSSVEAPP*LVTWKG
Trigger: TCCCTTCCAAGTCACCAACCAAGGTGGTGCCTCGAC...GCTGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GGGGGCCCCCGCTGGCCACTCTGCCTTCCTCGGCCATGTCCGAAGTGCTGGGGGACTAGGGGTGTGGACTaGGCCGTGGTACTACCACAG +
Preference number: 4 (lower is better)
Translates to: GGPRWPLCLPRPCPKCWGTRGVD*AVVLPQ
Trigger: CTGTGGTAGTACCACGGCCCAGTCCACACCCCTAGT...CCCCCAGCACTTCGGACATGGCCGAGGAAGGCAGAGTGGCCAGCGGGGGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CCA 90 bp AGGAGGGCAGTGGGGAGGGCCGCTCACAGGGCATCCCAGGGGTCCTCCTCCCAGTCACCTTCTCCTCGATaGCTGAGTGTGGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: RRAVGRAAHRASQGSSSQSPSPR*LSVGPA
Trigger: GGCTGGCCCCACACTCAGCCATCGAGGAGAAGGTGA...CTGGGAGGAGGACCCCTGGGATGCCCTGTGAGCGGCCCTCCCCACTGCCCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CCA 90 bp ACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCAGCGGCGGTTCAGCGCTaGCAGCTTGCTCTTCTTAAG +
Preference number: 4 (lower is better)
Translates to: TSTGASRRASRGLRGRGAAAVQR*QLALLK
Trigger: CTTAAGAAGAGCAAGCTGCCAGCGCTGAACCGCCGC...TGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGCCTCCTTGTTCTTGGTaGCCTCTGTGCGGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: PQTPPARGPPGGPREGFGPPCSW*PLCGGS
Trigger: TGAACCGCCGCACAGAGGCCACCAAGAACAAGGAGG...CCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCAGCACTGCTACCATGGTCTaGGGGTGGGAAGGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: QHGGLQEGLARASGQRSSTATMV*GWEGPN
Trigger: ATTGGGACCTTCCCACCCCCAGACCATGGTAGCAGT...GCTGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GCCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCCCCGAAAGGTGGGCTGGACAGGAGGGGTaGGGCCTGGGTCTTCACAGG +
Preference number: 4 (lower is better)
Translates to: AFLGHVRSAGGAATPERWAGQEG*GLGLHR
Trigger: CCTGTGAAGACCCAGGCCCCACCCCTCCTGTCCAGC...CCACCTTTCGGGGGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CCA 90 bp CACTCTGCCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCCCCGAAGTGCAAGGAGGGCAGTaGGGAGGGCCGCTCACAGGG +
Preference number: 4 (lower is better)
Translates to: HSAFLGHVRSAGGAATPEVQGGQ*GGPLTG
Trigger: CCCTGTGAGCGGCCCTCCCCACTGCCCTCCTTGCAC...TTCGGGGGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGGCAGAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR TCA 90 bp CCTGGCCCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCCTCTCTTCTTCAGCTTaGTGCACTCCTCTCGCAGGT +
Preference number: 4 (lower is better)
Translates to: PGPQTPPARGPPGGPREGLSSSA*CTPLAG
Trigger: ACCTGCGAGAGGAGTGCATCAAGCTGAAGAAGAGAG...GCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGGGCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR TCA 90 bp TTCTTATCCACCTGCCTCCTTGGTCCCTTCAGGGAGGGGTCCCCGTCTCCGGGGCCCAGGTCGCCGTCCTaGCCCCTGGCTGGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: FLSTCLLGPFREGSPSPGPRSPS*PLAGLL
Trigger: AAGAAGCCCAGCCAGGGGTCAGGACGGCGACCTGGG...CCCCGGAGACGGGGACCCCTCCCTGAAGGGACCAAGGAGGCAGGTGGATAAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp CACTCTGCCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCCCCGAATGGGGGACTCCTTGGTaGCTAGCGGAGCCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: HSAFLGHVRSAGGAATPEWGTPW*LAEPQV
Trigger: GACCTGGGGCTCCGCTAGTCACCAAGGAGTCCCCCA...TTCGGGGGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGGCAGAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR TCA 90 bp TTCTTATCCACCTGCCTCCTTGGTCCCTTCAGGGAGGGGTCCCCGTCTCCGGGGTGGTGTTGCGGTGCTTaGCCTCGGCGCCAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: FLSTCLLGPFREGSPSPGWCCGA*PRRQGL
Trigger: GAGCCCCTGGCGCCGAGGTCAAGCACCGCAACACCA...CCCCGGAGACGGGGACCCCTCCCTGAAGGGACCAAGGAGGCAGGTGGATAAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp GCGGGGTCTCTCCCTGAGCTGAGCACGGTCATCTCATCCGCCGAAGCAGTGGGTGTCGGGGTGGGCACATaGGAGGGTCCGAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: AGSLPELSTVISSAEAVGVGVGT*EGPRSC
Trigger: GCAGCTCCTCGGACCCTCTCATGTGCCCACCCCGAC...ACCCACTGCTTCGGCGGATGAGATGACCGTGCTCAGCTCAGGGAGAGACCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp GGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCCGGTCTCTCCCTGAGCTaGGCACGGTCATCTCATCCG +
Preference number: 4 (lower is better)
Translates to: GPRLRGLGMKRAGPVCGPGLSLS*ARSSHP
Trigger: CGGATGAGATGACCGTGCTCAGCTCAGGGAGAGACC...GGGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp TTCTTATCCACCTGCCTCCTTGGTCCCTTCAGGGAGGGGTCCCCGTCTCCGGGGCCGGCAGGCTGTCTCTaGCCCCTTACGCAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: FLSTCLLGPFREGSPSPGPAGCL*PLTQVG
Trigger: GCCCACCTGCGTAAGGGGGCAGAGACAGCCTGCCGG...CCCCGGAGACGGGGACCCCTCCCTGAAGGGACCAAGGAGGCAGGTGGATAAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR GCA 90 bp CTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGCTCATTGGGGTCACCTaGCTCATCAGAAGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: LHQHGGLQEGLARASGQRLIGVT*LIRRGG
Trigger: TCCTCCTCTTCTGATGAGGCAGGTGACCCCAATGAG...CCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp TTCTTATCCACCTGCCTCCTTGGTCCCTTCAGGGAGGGGTCCCCGTCTCCGGGGCCCATTGAGTGGGCCTaGAGCCCCGGCCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: FLSTCLLGPFREGSPSPGPIEWA*SPGQEG
Trigger: GCCTTCCTGGCCGGGGCTGCAGGCCCACTCAATGGG...CCCCGGAGACGGGGACCCCTCCCTGAAGGGACCAAGGAGGCAGGTGGATAAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp GCGGGGTCTCTCCCTGAGCTGAGCACGGTCATCTCATCCGCCGAAGCAGTGGGTCCCGGGTCTTTTCGGTaGCAGGCCTGGCTGGCACCC +
Preference number: 4 (lower is better)
Translates to: AGSLPELSTVISSAEAVGPGSFR*QAWLAP
Trigger: GGGTGCCAGCCAGGCCTGGCACCGAAAAGACCCGGG...ACCCACTGCTTCGGCGGATGAGATGACCGTGCTCAGCTCAGGGAGAGACCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp AGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGGGGCACAGGGCCCCTaGCAGCCGGCTCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: RDWRAATQWPLTPSPFQEGAQGP*QPALGQ
Trigger: CTGGCCAAGAGCCGGCTGGCAGGGGCCCTGTGCCCC...TTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp GCCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCCCCGAAAGGTGGTGCTGGGGGTCCCACTaGTACCATGGTCTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: AFLGHVRSAGGAATPERWCWGSH*YHGLGV
Trigger: CACCCCCAGACCATGGTAGCAGTGGGACCCCCAGCA...CCACCTTTCGGGGGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CCA 90 bp CTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAACGCCTGTACCACATaGTTGGCAACCTCGTCCAGA +
Preference number: 4 (lower is better)
Translates to: LHQHGGLQEGLARASGQRNACTT*LATSSR
Trigger: TCTGGACGAGGTTGCCAACCATGTGGTACAGGCGTT...CCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR CCA 90 bp GGGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCGGCTGGGTGCCTCATTaGGGTCACCTGCCTCATCAG +
Preference number: 4 (lower is better)
Translates to: GSPSPGAGHEESRSSLWSGWVPH*GHLPHQ
Trigger: CTGATGAGGCAGGTGACCCCAATGAGGCACCCAGCC...GGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GCCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCCCCGAAAGGTGGTGCCCAGGACCTGGGTaGTCCCCATTGAGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: AFLGHVRSAGGAATPERWCPGPG*SPLSGP
Trigger: AGGCCCACTCAATGGGGACCACCCAGGTCCTGGGCA...CCACCTTTCGGGGGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CCA 90 bp GCGGGGTCTCTCCCTGAGCTGAGCACGGTCATCTCATCCGCCGAAGCAGTGGGTGAGTTCCGGGGGAGCTaGGGACTGAGCTGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: AGSLPELSTVISSAEAVGEFRGS*GLSCGP
Trigger: AGGCCCGCAGCTCAGTCCCCAGCTCCCCCGGAACTC...ACCCACTGCTTCGGCGGATGAGATGACCGTGCTCAGCTCAGGGAGAGACCCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GCGGGGTCTCTCCCTGAGCTGAGCACGGTCATCTCATCCGCCGAAGCAGTGGGTAGGGTGAAGGGCTGGTaGGCAGGCCTTGCGCCCCCT +
Preference number: 4 (lower is better)
Translates to: AGSLPELSTVISSAEAVGRVKGW*AGLAPP
Trigger: AGGGGGCGCAAGGCCTGCCCACCAGCCCTTCACCCT...ACCCACTGCTTCGGCGGATGAGATGACCGTGCTCAGCTCAGGGAGAGACCCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CACTCTGCCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCCCCGAACTGGGGACAGCGTGGTaGACAAGGCTGACTGCGGGG +
Preference number: 4 (lower is better)
Translates to: HSAFLGHVRSAGGAATPELGTAW*TRLTAG
Trigger: CCCCGCAGTCAGCCTTGTCCACCACGCTGTCCCCAG...TTCGGGGGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGGCAGAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CCA 90 bp GGGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCCCAGTGGCCTGTGGATaGAGGGCACCATGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: GSPSPGAGHEESRSSLWSPVACG*RAPCLQ
Trigger: CTGGAGACATGGTGCCCTCCATCCACAGGCCACTGG...GGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GGGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCTGGAAGGGAGCTTGGTaGGGCTGCTGTGAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: GSPSPGAGHEESRSSLWSWKGAW*GCCEGS
Trigger: AGAGCCCTCACAGCAGCCCCACCAAGCTCCCTTCCA...GGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCCACTTGGAAGGGAGCTTaGTGGGGCTGCTGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: GPRLRGLGMKRAGPVCGPTWKGA*WGCCEG
Trigger: GCCCTCACAGCAGCCCCACCAAGCTCCCTTCCAAGT...GGGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGCCAGGGGCTCGCTCCTaGCCCTGGAGCCGCAGCACG +
Preference number: 4 (lower is better)
Translates to: DWRAATQWPLTPSPFQEEPGARS*PWSRST
Trigger: CGTGCTGCGGCTCCAGGGCCAGGAGCGAGCCCCTGG...CTCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGTCAGAAGACACCGGCTaGAAATCCCCGTACTCAGGC +
Preference number: 4 (lower is better)
Translates to: PQTPPARGPPGGPREGFGSEDTG*KSPYSG
Trigger: GCCTGAGTACGGGGATTTCCAGCCGGTGTCTTCTGA...CCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CTGAGCACGGTCATCTCATCCGCCGAAGCAGTGGGTGGTGGGGTGTGCCAGGGACAGTGCAGGGAAGGCTaGCATGCTGGGGTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: LSTVISSAEAVGGGVCQGQCREG*HAGVPP
Trigger: GGGCGGCACCCCAGCATGCCAGCCTTCCCTGCACTG...TCCCTGGCACACCCCACCACCCACTGCTTCGGCGGATGAGATGACCGTGCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GGGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCAGGAGGGGTGGGGCCTaGGTCTTCACAGGGATCATC +
Preference number: 4 (lower is better)
Translates to: GSPSPGAGHEESRSSLWSRRGGA*VFTGII
Trigger: GATGATCCCTGTGAAGACCCAGGCCCCACCCCTCCT...GGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGGGAAGAGCCTTACTCTaGGTGAGAGAAGGGACCAAG +
Preference number: 4 (lower is better)
Translates to: LHQHGGLQEGLARASGQRGRALL*VREGTK
Trigger: CTTGGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCC...CCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CCTGGCCCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCAGAGGGGGCCCAAGGTaGGGTATACTTCAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: PGPQTPPARGPPGGPREGRGGPR*GILQRK
Trigger: TTTCCTCTGAAGTATACCCCACCTTGGGCCCCCTCT...GCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGGGCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR TCA 90 bp GGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGGGCCCCTGGCCCTCTaGGGTAGCACCGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GLEGCDTVAFNPQSLPGRGPLAL*GSTEAW
Trigger: CCAGGCTTCGGTGCTACCTCAGAGGGCCAGGGGCCC...TCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp GGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCCGCTTTTCACCTGAGATaGGGAATGGGGGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GPRLRGLGMKRAGPVCGPAFHLR*GMGVAR
Trigger: CCTGGCCACCCCCATTCCTCATCTCAGGTGAAAAGC...GGGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp GCGGGGTCTCTCCCTGAGCTGAGCACGGTCATCTCATCCGCCGAAGCAGTGGGTGGTTGTGTAGCAGGGTaGAGGGCTGGTGGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: AGSLPELSTVISSAEAVGGCVAG*RAGGQA
Trigger: GGCCTGCCCACCAGCCCTTCACCCTGCTACACAACC...ACCCACTGCTTCGGCGGATGAGATGACCGTGCTCAGCTCAGGGAGAGACCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp CTGAGCACGGTCATCTCATCCGCCGAAGCAGTGGGTGGTGGGGTGTGCCAGGGACGTGGTGGACAAGGCTaGCTGCGGGGGTCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: LSTVISSAEAVGGGVCQGRGGQG*LRGSEL
Trigger: CAGCTCAGACCCCCGCAGTCAGCCTTGTCCACCACG...TCCCTGGCACACCCCACCACCCACTGCTTCGGCGGATGAGATGACCGTGCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp GCGGGGTCTCTCCCTGAGCTGAGCACGGTCATCTCATCCGCCGAAGCAGTGGGTTCCAGCACTCTCCCCTaGCTTCCCAGGTCCCCGGGT +
Preference number: 4 (lower is better)
Translates to: AGSLPELSTVISSAEAVGSSTLP*LPRSPG
Trigger: ACCCGGGGACCTGGGAAGTCAGGGGAGAGTGCTGGA...ACCCACTGCTTCGGCGGATGAGATGACCGTGCTCAGCTCAGGGAGAGACCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp GCGGGGTCTCTCCCTGAGCTGAGCACGGTCATCTCATCCGCCGAAGCAGTGGGTGGCGGGGTCTCTCCCTaGGCTGAGCACGGTCATCTC +
Preference number: 4 (lower is better)
Translates to: AGSLPELSTVISSAEAVGGGVSP*AEHGHL
Trigger: GAGATGACCGTGCTCAGCTCAGGGAGAGACCCCGCC...ACCCACTGCTTCGGCGGATGAGATGACCGTGCTCAGCTCAGGGAGAGACCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp GCCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCCCCGAAAGGTGGGAGCCTTACTCTGGGTaGGAGAAGGGACCAAGGGCG +
Preference number: 4 (lower is better)
Translates to: AFLGHVRSAGGAATPERWEPYSG*EKGPRA
Trigger: CGCCCTTGGTCCCTTCTCTCACCCAGAGTAAGGCTC...CCACCTTTCGGGGGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR GCA 90 bp AGTAGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGCTGGTGGGCAGGCCTTaGGCCCCCTCTGGGGACAGC +
Preference number: 4 (lower is better)
Translates to: SRDWRAATQWPLTPSPFQLVGRP*APSGDS
Trigger: GCTGTCCCCAGAGGGGGCGCAAGGCCTGCCCACCAG...CTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCTACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp AGTAGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGAGCTGGCCCTGCACCTaGCCCAGCCCCGTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: SRDWRAATQWPLTPSPFQSWPCT*PSPVLG
Trigger: GCCCAACACGGGGCTGGGGCAGGTGCAGGGCCAGCT...CTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCTACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp ACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCACTGCATGAAGGTGTCTaGACCTTGGTACATGCCAGC +
Preference number: 4 (lower is better)
Translates to: TSTGASRRASRGLRGRGALHEGV*TLVHAS
Trigger: GCTGGCATGTACCAAGGTGCAGACACCTTCATGCAG...TGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp GCCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCCCCGAAAGGTGGCGAGGAGCTGCCGGCTaGCCTAGTATTGGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: AFLGHVRSAGGAATPERWRGAAG*PSIGEG
Trigger: ACCTTCCCCAATACTAGGGCAGCCGGCAGCTCCTCG...CCACCTTTCGGGGGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR GCA 90 bp GCGGGGTCTCTCCCTGAGCTGAGCACGGTCATCTCATCCGCCGAAGCAGTGGGTCCGAAGTGCTGGGGGTaGGGCTACCCCCGAAAGGTG +
Preference number: 4 (lower is better)
Translates to: AGSLPELSTVISSAEAVGPKCWG*GYPRKV
Trigger: CACCTTTCGGGGGTAGCCGCACCCCCAGCACTTCGG...ACCCACTGCTTCGGCGGATGAGATGACCGTGCTCAGCTCAGGGAGAGACCCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp AGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGCCTTACGATCCGCCAGGTCCATaGCCGCGGCTTGGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: RAATQWPLTPSPFQEEPYDPPGP*PRLGGG
Trigger: CCCGCCCCCAAGCCGCGGCCATGGACCTGGCGGATC...GTAAGGCTCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR CCA 90 bp CCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGAGCACCTCCAGAATCTaGGCCTTCTTCCGAAGGAAC +
Preference number: 4 (lower is better)
Translates to: PQTPPARGPPGGPREGFGSTSRI*AFFRRN
Trigger: GTTCCTTCGGAAGAAGGCCCAGATTCTGGAGGTGCT...CCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR CCA 90 bp CTGAGCACGGTCATCTCATCCGCCGAAGCAGTGGGTGGTGGGGTGTGCCAGGGAGCCTGGGGCACAGTTTaGGCCAGAGCTGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: LSTVISSAEAVGGGVCQGAWGTV*ARAGAL
Trigger: CAGGGCACCAGCTCTGGCCCAAACTGTGCCCCAGGC...TCCCTGGCACACCCCACCACCCACTGCTTCGGCGGATGAGATGACCGTGCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR CCA 90 bp CACTCTGCCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCCCCGAAGATGAGGAATGGGGGTaGCCAGGCCGAGAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: HSAFLGHVRSAGGAATPEDEEWG*PGREPS
Trigger: ACTGGGCTCTCGGCCTGGCCACCCCCATTCCTCATC...TTCGGGGGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGGCAGAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CCA 90 bp GCCACTCTGCCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCCCCGACCATGGTCTGGGGGTaGGAAGGTCCCAATGCCACT +
Preference number: 4 (lower is better)
Translates to: ATLPSSAMSEVLGVRLPPTMVWG*EGPNAT
Trigger: AGTGGCATTGGGACCTTCCCACCCCCAGACCATGGT...CGGGGGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGGCAGAGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CCA 90 bp AGTAGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGTCTCATGGCCCCGGTaGCCCGGAGCAGCGGGTAGC +
Preference number: 4 (lower is better)
Translates to: SRDWRAATQWPLTPSPFQVSWPR*PGAAGS
Trigger: GCTACCCGCTGCTCCGGGCCACCGGGGCCATGAGAC...CTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCTACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp TTCTTATCCACCTGCCTCCTTGGTCCCTTCAGGGAGGGGTCCCCGTCTCCGGGGTCAGGACAGGTCTCATaGCCCCGGTGGCCCGGAGCA +
Preference number: 4 (lower is better)
Translates to: FLSTCLLGPFREGSPSPGSGQVS*PRWPGA
Trigger: TGCTCCGGGCCACCGGGGCCATGAGACCTGTCCTGA...CCCCGGAGACGGGGACCCCTCCCTGAAGGGACCAAGGAGGCAGGTGGATAAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CACTCTGCCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCCCCGAACAGTTCTTGGCCAGCTaGACAGGAGGGGTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: HSAFLGHVRSAGGAATPEQFLAS*TGGVGP
Trigger: AGGCCCCACCCCTCCTGTCCAGCTGGCCAAGAACTG...TTCGGGGGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGGCAGAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CCA 90 bp CCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCCCCGAAAGGTGGGGGAAGGTCCAGTTCTTaGCCAGCTGGACAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: PSSAMSEVLGVRLPPKGGGRSSS*PAGQEG
Trigger: CCCCTCCTGTCCAGCTGGCCAAGAACTGGACCTTCC...CCCACCTTTCGGGGGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CCA 90 bp CCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCCCCGAAAGGTGGGCTGCAATTCTCACCATaGGGGTCCTGGGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: PSSAMSEVLGVRLPPKGGLQFSP*GSWAAP
Trigger: AGGGGCTGCCCAGGACCCCCATGGTGAGAATTGCAG...CCCACCTTTCGGGGGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR TCA 90 bp AGTAGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGCACCCCATTCTTCTCTaGGCCCAGGGCCCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: SRDWRAATQWPLTPSPFQHPILL*AQGPLG
Trigger: CCCGAGGGGGCCCTGGGCTCAGAGAAGAATGGGGTG...CTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCTACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp GCGGGGTCTCTCCCTGAGCTGAGCACGGTCATCTCATCCGCCGAAGCAGTGGGTGAGGCAGCTCCTTGGTaGGACAGGCTCCAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: AGSLPELSTVISSAEAVGEAAPW*DRLQVH
Trigger: GTGGACCTGGAGCCTGTCTCACCAAGGAGCTGCCTC...ACCCACTGCTTCGGCGGATGAGATGACCGTGCTCAGCTCAGGGAGAGACCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp CAGTCCCTTCCAGGAAGAGCCTTACTCTGGGTGAGAGAAGGGACCAAGGGCGGGGTCGGGGTGGGCACATaGGAGGGTCCGAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: QSLPGRALLWVREGTKGGVGVGT*EGPRSC
Trigger: GCAGCTCCTCGGACCCTCTCATGTGCCCACCCCGAC...CCCGCCCTTGGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCCTGGAAGGGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp GCCACTCTGCCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCCCCGCGTAGAGTGAGTCACTaGGAGACTCCGAGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: ATLPSSAMSEVLGVRLPPRRVSH*ETPRSP
Trigger: TGGAGACCTCGGAGTCTCTCAGTGACTCACTCTACG...CGGGGGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGGCAGAGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR TCA 90 bp CTGAGCACGGTCATCTCATCCGCCGAAGCAGTGGGTGGTGGGGTGTGCCAGGGAAGAGGCACTGAGCTCTaGGGGGCGTCTGTGCACCTG +
Preference number: 4 (lower is better)
Translates to: LSTVISSAEAVGGGVCQGRGTEL*GASVHL
Trigger: CAGGTGCACAGACGCCCCTCAGAGCTCAGTGCCTCT...TCCCTGGCACACCCCACCACCCACTGCTTCGGCGGATGAGATGACCGTGCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR GCA 90 bp CCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGCTCAGCATCTGGTTCTaGCGTTCCAGGTCAAACACT +
Preference number: 4 (lower is better)
Translates to: PQTPPARGPPGGPREGFGLSIWF*RSRSNT
Trigger: AGTGTTTGACCTGGAACGGCAGAACCAGATGCTGAG...CCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR GCA 90 bp CAGTCCCTTCCAGGAAGAGCCTTACTCTGGGTGAGAGAAGGGACCAAGGGCGGGGCAGGCCTCCCAGGTTaGCAGGGCCTAGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: QSLPGRALLWVREGTKGGAGLPG*QGLAAG
Trigger: GCCTGCTGCTAGGCCCTGGCAACCTGGGAGGCCTGC...CCCGCCCTTGGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCCTGGAAGGGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR GCA 90 bp CAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCAGCGGCCAATTTGGAGCTTaGTTTTCACCTGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: QHGGLQEGLARASGQRSSGQFGA*FSPEMR
Trigger: CCTCATCTCAGGTGAAAAGCAAGCTCCAAATTGGCC...GCTGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp AGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAACCCGCAGAGGTGTGCTaGCAGGATCCCCAGGTCGCC +
Preference number: 4 (lower is better)
Translates to: RDWRAATQWPLTPSPFQEPAEVC*QDPQVA
Trigger: GGCGACCTGGGGATCCTGGCAGCACACCTCTGCGGG...TTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp GCGGGGTCTCTCCCTGAGCTGAGCACGGTCATCTCATCCGCCGAAGCAGTGGGTTCTTGGTGGCCTCTGTaGGGCGGTTCAGCGCTGGCA +
Preference number: 4 (lower is better)
Translates to: AGSLPELSTVISSAEAVGSWWPL*GGSALA
Trigger: TGCCAGCGCTGAACCGCCGCACAGAGGCCACCAAGA...ACCCACTGCTTCGGCGGATGAGATGACCGTGCTCAGCTCAGGGAGAGACCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp GGGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCGTGGGAAGGTCCCAATaGCACTGTCCAAGGTTCGAG +
Preference number: 4 (lower is better)
Translates to: GSPSPGAGHEESRSSLWSVGRSQ*HCPRFE
Trigger: CTCGAACCTTGGACAGTGGCATTGGGACCTTCCCAC...GGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp GCGGGGTCTCTCCCTGAGCTGAGCACGGTCATCTCATCCGCCGAAGCAGTGGGTCCAGCAGCTCCTCTATaGCTGGCACCTCCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: AGSLPELSTVISSAEAVGPAAPL*LAPPAP
Trigger: TGGAGCGGGAGGTGCCAGGCATAGAGGAGCTGCTGG...ACCCACTGCTTCGGCGGATGAGATGACCGTGCTCAGCTCAGGGAGAGACCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CTGCTCCAGAGGGGGCCCAAGGTGGGGTATACTTCAGAGGAAACAGGCTGGAGGCCGAAGCCTGGCCTGTaGGCCTCTGGGGTACCCCCA +
Preference number: 4 (lower is better)
Translates to: LLQRGPKVGYTSEETGWRPKPGL*ASGVPP
Trigger: TGGGGGTACCCCAGAGGCCCACAGGCCAGGCTTCGG...CCTCCAGCCTGTTTCCTCTGAAGTATACCCCACCTTGGGCCCCCTCTGGAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CCA 90 bp CACCACAAGATGGCTCAGCCTGAAGTAGGGACTGGAGGGCTGCGACACAGTGGCAGCAGGGTGAAGGGCTaGTGGGCAGGCCTTGCGCCC +
Preference number: 4 (lower is better)
Translates to: HHKMAQPEVGTGGLRHSGSRVKG*WAGLAP
Trigger: GGGCGCAAGGCCTGCCCACCAGCCCTTCACCCTGCT...GCCACTGTGTCGCAGCCCTCCAGTCCCTACTTCAGGCTGAGCCATCTTGTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CTGAGCACGGTCATCTCATCCGCCGAAGCAGTGGGTGGTGGGGTGTGCCAGGGACTGGGAGGCAAGGACTaGGGGGTACTCCAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: LSTVISSAEAVGGGVCQGLGGKD*GVLQGF
Trigger: GAAGCCCTGGAGTACCCCCCAGTCCTTGCCTCCCAG...TCCCTGGCACACCCCACCACCCACTGCTTCGGCGGATGAGATGACCGTGCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GCCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCCCCGAAAGGTGGCAGGTACTAGGGGTGTaGACTGGGCCGTGGTACTAC +
Preference number: 4 (lower is better)
Translates to: AFLGHVRSAGGAATPERWQVLGV*TGPWYY
Trigger: GTAGTACCACGGCCCAGTCCACACCCCTAGTACCTG...CCACCTTTCGGGGGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CCA 90 bp TTCTTATCCACCTGCCTCCTTGGTCCCTTCAGGGAGGGGTCCCCGTCTCCGGGGCTCAGGGCCCTGACTTaGGTCAGTGGGGCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: FLSTCLLGPFREGSPSPGLRALT*VSGARY
Trigger: GTACCTGGCCCCACTGACCCAAGTCAGGGCCCTGAG...CCCCGGAGACGGGGACCCCTCCCTGAAGGGACCAAGGAGGCAGGTGGATAAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GGGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCGCAGGTCTTCCGCCTTaGCCATCAGCTTGGAGATGT +
Preference number: 4 (lower is better)
Translates to: GSPSPGAGHEESRSSLWSAGLPP*PSAWRC
Trigger: ACATCTCCAAGCTGATGGCCAAGGCGGAAGACCTGC...GGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CTGAGCACGGTCATCTCATCCGCCGAAGCAGTGGGTGGTGGGGTGTGCCAGGGACAGACCCCAAAGGCATaGGGCAGAGGAGGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: LSTVISSAEAVGGGVCQGQTPKA*GRGGQH
Trigger: GTGCTGCCCTCCTCTGCCCCATGCCTTTGGGGTCTG...TCCCTGGCACACCCCACCACCCACTGCTTCGGCGGATGAGATGACCGTGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp GGGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCAGCTGGAGTTTCTGCTaGAACAGGGCACTCAGCATC +
Preference number: 4 (lower is better)
Translates to: GSPSPGAGHEESRSSLWSSWSFC*NRALSI
Trigger: GATGCTGAGTGCCCTGTTTCAGCAGAAACTCCAGCT...GGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR TCA 90 bp GGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGACGTGGTGGACAAGGCTaGCTGCGGGGGTCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: GLEGCDTVAFNPQSLPGRRGGQG*LRGSEL
Trigger: CAGCTCAGACCCCCGCAGTCAGCCTTGTCCACCACG...TCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp CACCACAAGATGGCTCAGCCTGAAGTAGGGACTGGAGGGCTGCGACACAGTGGCGCCCAGGCTTGGGGCTaGGGTTGGCACTTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: HHKMAQPEVGTGGLRHSGAQAWG*GWHFGR
Trigger: CCTGCCAAAGTGCCAACCTCAGCCCCAAGCCTGGGC...GCCACTGTGTCGCAGCCCTCCAGTCCCTACTTCAGGCTGAGCCATCTTGTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp GACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGCTTCTCCTCGATGGCTaGGTGTGGGGCCAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: DWRAATQWPLTPSPFQEELLLDG*VWGQPL
Trigger: GAGGGGCTGGCCCCACACTCAGCCATCGAGGAGAAG...CTCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp AGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGCCTTACTGGTGTTGCGGTGCTTaGCCTCGGCGCCAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: RAATQWPLTPSPFQEEPYWCCGA*PRRQGL
Trigger: GAGCCCCTGGCGCCGAGGTCAAGCACCGCAACACCA...GTAAGGCTCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp CAGTCCCTTCCAGGAAGAGCCTTACTCTGGGTGAGAGAAGGGACCAAGGGCGGGTCCGGGCTTCCATCTTaGCTTCCCTCCGGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: QSLPGRALLWVREGTKGGSGLPS*LPSGAG
Trigger: CCCCGCTCCGGAGGGAAGTCAAGATGGAAGCCCGGA...CCCGCCCTTGGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCCTGGAAGGGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp GGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCCTTAGCAGCTGCTGCATaGAGGTGTCTGCACCTTGGT +
Preference number: 4 (lower is better)
Translates to: GPRLRGLGMKRAGPVCGPLAAAA*RCLHLG
Trigger: ACCAAGGTGCAGACACCTTCATGCAGCAGCTGCTAA...GGGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp CTGAGCACGGTCATCTCATCCGCCGAAGCAGTGGGTGGTGGGGTGTGCCAGGGAGAGCCTTACTCTGGGTaGGAGAAGGGACCAAGGGCG +
Preference number: 4 (lower is better)
Translates to: LSTVISSAEAVGGGVCQGEPYSG*EKGPRA
Trigger: CGCCCTTGGTCCCTTCTCTCACCCAGAGTAAGGCTC...TCCCTGGCACACCCCACCACCCACTGCTTCGGCGGATGAGATGACCGTGCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp AGGAGGGCAGTGGGGAGGGCCGCTCACAGGGCATCCCAGGGGTCCTCCTCCCAGGGCTGGAGGTACAACTaGGAACAGTCCTACAAGGTT +
Preference number: 4 (lower is better)
Translates to: RRAVGRAAHRASQGSSSQGWRYN*EQSYKV
Trigger: AACCTTGTAGGACTGTTCTCAGTTGTACCTCCAGCC...CTGGGAGGAGGACCCCTGGGATGCCCTGTGAGCGGCCCTCCCCACTGCCCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR GCA 90 bp AGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAAGTTGCCTGGGGTCCTaGGGCCGGGATGGGGAGACT +
Preference number: 4 (lower is better)
Translates to: RDWRAATQWPLTPSPFQESCLGS*GRDGET
Trigger: AGTCTCCCCATCCCGGCCGCAGGACCCCAGGCAACT...TTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp GCGGGGTCTCTCCCTGAGCTGAGCACGGTCATCTCATCCGCCGAAGCAGTGGGTGGCTCTTATTGGGCTTaGCCAGGCTTGGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: AGSLPELSTVISSAEAVGGSYWA*PGLGLR
Trigger: CCTCAGCCCCAAGCCTGGGCAAGCCCAATAAGAGCC...ACCCACTGCTTCGGCGGATGAGATGACCGTGCTCAGCTCAGGGAGAGACCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp CTGCTCCAGAGGGGGCCCAAGGTGGGGTATACTTCAGAGGAAACAGGCTGGAGGGTGGCCGGGCCCGGCTaGTTAGGTAGGCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LLQRGPKVGYTSEETGWRVAGPG*LGRPSP
Trigger: AGGAGAAGGCCTACCTAAGCAGCCGGGCCCGGCCAC...CCTCCAGCCTGTTTCCTCTGAAGTATACCCCACCTTGGGCCCCCTCTGGAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR GCA 90 bp AGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAACAGGGAAGGCTGGCATaGTGGGGTGCCGCCCACTCA +
Preference number: 4 (lower is better)
Translates to: RDWRAATQWPLTPSPFQEQGRLA*WGAAHS
Trigger: TGAGTGGGCGGCACCCCAGCATGCCAGCCTTCCCTG...TTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp CACCACAAGATGGCTCAGCCTGAAGTAGGGACTGGAGGGCTGCGACACAGTGGCCCGAAGTGCTGGGGGTaGGGCTACCCCCGAAAGGTG +
Preference number: 4 (lower is better)
Translates to: HHKMAQPEVGTGGLRHSGPKCWG*GYPRKV
Trigger: CACCTTTCGGGGGTAGCCGCACCCCCAGCACTTCGG...GCCACTGTGTCGCAGCCCTCCAGTCCCTACTTCAGGCTGAGCCATCTTGTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCCTCTGACATCTGGCCCTaGGAACAAGGAAGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: GPRLRGLGMKRAGPVCGPSDIWP*EQGREA
Trigger: GGCTTCTCTTCCTTGTTCCCAGGGCCAGATGTCAGA...GGGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR CCA 90 bp GACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGGCAGGGTGTCGGGGCTaGGTGCCTCATTGGGGTCAC +
Preference number: 4 (lower is better)
Translates to: DWRAATQWPLTPSPFQEEAGCRG*VPHWGH
Trigger: GTGACCCCAATGAGGCACCCAGCCCCGACACCCTGC...CTCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CACCACAAGATGGCTCAGCCTGAAGTAGGGACTGGAGGGCTGCGACACAGTGGCAGCTGTGGGGGCGCCTaGTCTGGGGAGGATGACTGC +
Preference number: 4 (lower is better)
Translates to: HHKMAQPEVGTGGLRHSGSCGGA*SGEDDC
Trigger: GCAGTCATCCTCCCCAGACCAGGCGCCCCCACAGCT...GCCACTGTGTCGCAGCCCTCCAGTCCCTACTTCAGGCTGAGCCATCTTGTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAAGCTGTGGGGGCGCCTaGTCTGGGGAGGATGACTGC +
Preference number: 4 (lower is better)
Translates to: GLEGCDTVAFNPQSLPGRSCGGA*SGEDDC
Trigger: GCAGTCATCCTCCCCAGACCAGGCGCCCCCACAGCT...TCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp AGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGCCTTACTGGCCTGTGGGCCTCTaGGGTACCCCCACCCCAAGC +
Preference number: 4 (lower is better)
Translates to: RAATQWPLTPSPFQEEPYWPVGL*GTPTPS
Trigger: GCTTGGGGTGGGGGTACCCCAGAGGCCCACAGGCCA...GTAAGGCTCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp AGTAGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGCTGGGGACAGCGTGGTaGACAAGGCTGACTGCGGGG +
Preference number: 4 (lower is better)
Translates to: SRDWRAATQWPLTPSPFQLGTAW*TRLTAG
Trigger: CCCCGCAGTCAGCCTTGTCCACCACGCTGTCCCCAG...CTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCTACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GCGGGGTCTCTCCCTGAGCTGAGCACGGTCATCTCATCCGCCGAAGCAGTGGGTCCAGTGGCCTGTGGATaGAGGGCACCATGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: AGSLPELSTVISSAEAVGPVACG*RAPCLQ
Trigger: CTGGAGACATGGTGCCCTCCATCCACAGGCCACTGG...ACCCACTGCTTCGGCGGATGAGATGACCGTGCTCAGCTCAGGGAGAGACCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GCTGGCCACTCTGCCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCAAGGTGTCTGCACCTTaGTACATGCCAGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: AGHSAFLGHVRSAGGAATKVSAP*YMPASW
Trigger: CCAGCTGGCTGGCATGTACCAAGGTGCAGACACCTT...GGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGGCAGAGTGGCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CCA 90 bp GCGGGGTCTCTCCCTGAGCTGAGCACGGTCATCTCATCCGCCGAAGCAGTGGGTCCGCCAGCTCTTGGATaGCAGCTCCTTGCCATCCAC +
Preference number: 4 (lower is better)
Translates to: AGSLPELSTVISSAEAVGPPALG*QLLAIH
Trigger: GTGGATGGCAAGGAGCTGCCATCCAAGAGCTGGCGG...ACCCACTGCTTCGGCGGATGAGATGACCGTGCTCAGCTCAGGGAGAGACCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GCCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCCCCGAAAGGTGGACTGCTACCATGGTCTaGGGGTGGGAAGGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: AFLGHVRSAGGAATPERWTATMV*GWEGPN
Trigger: ATTGGGACCTTCCCACCCCCAGACCATGGTAGCAGT...CCACCTTTCGGGGGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CCA 90 bp AGTAGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGTCAGGACAGGTCTCATaGCCCCGGTGGCCCGGAGCA +
Preference number: 4 (lower is better)
Translates to: SRDWRAATQWPLTPSPFQSGQVS*PRWPGA
Trigger: TGCTCCGGGCCACCGGGGCCATGAGACCTGTCCTGA...CTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCTACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CAGTCCCTTCCAGGAAGAGCCTTACTCTGGGTGAGAGAAGGGACCAAGGGCGGGGCTGGACAGGAGGGGTaGGGCCTGGGTCTTCACAGG +
Preference number: 4 (lower is better)
Translates to: QSLPGRALLWVREGTKGGAGQEG*GLGLHR
Trigger: CCTGTGAAGACCCAGGCCCCACCCCTCCTGTCCAGC...CCCGCCCTTGGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCCTGGAAGGGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGACATCCGCCGAAGCAGTaGGTGGTGGGGTGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: GLEGCDTVAFNPQSLPGRHPPKQ*VVGCAR
Trigger: CCTGGCACACCCCACCACCCACTGCTTCGGCGGATG...TCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CTGAGCACGGTCATCTCATCCGCCGAAGCAGTGGGTGGTGGGGTGTGCCAGGGAAGGGCTGCGACACAGTaGCCTTTAACCCCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: LSTVISSAEAVGGGVCQGRAATQ*PLTPSP
Trigger: GGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCT...TCCCTGGCACACCCCACCACCCACTGCTTCGGCGGATGAGATGACCGTGCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp TTCTTATCCACCTGCCTCCTTGGTCCCTTCAGGGAGGGGTCCCCGTCTCCGGGGAGGGCTGCGACACAGTaGCCTTTAACCCCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: FLSTCLLGPFREGSPSPGRAATQ*PLTPSP
Trigger: GGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCT...CCCCGGAGACGGGGACCCCTCCCTGAAGGGACCAAGGAGGCAGGTGGATAAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CACCACAAGATGGCTCAGCCTGAAGTAGGGACTGGAGGGCTGCGACACAGTGGCGAGGAGCAGCCGGGTTaGGCAGAGATGGCACGGCTG +
Preference number: 4 (lower is better)
Translates to: HHKMAQPEVGTGGLRHSGEEQPG*AEMARL
Trigger: CAGCCGTGCCATCTCTGCCCAACCCGGCTGCTCCTC...GCCACTGTGTCGCAGCCCTCCAGTCCCTACTTCAGGCTGAGCCATCTTGTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp CTGAGCACGGTCATCTCATCCGCCGAAGCAGTGGGTGGTGGGGTGTGCCAGGGAGGAGCGAGCCTGTCGTaGGCTGGAGTTTCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: LSTVISSAEAVGGGVCQGGASLS*AGVSAE
Trigger: TTCAGCAGAAACTCCAGCTCACGACAGGCTCGCTCC...TCCCTGGCACACCCCACCACCCACTGCTTCGGCGGATGAGATGACCGTGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR TCA 90 bp TTTAACCCCCAGTCCCTTCCAGGAAGAGCCTTACTCTGGGTGAGAGAAGGGACCGGGCCCCTGGCCCTCTaGGGTAGCACCGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: FNPQSLPGRALLWVREGTGPLAL*GSTEAW
Trigger: CCAGGCTTCGGTGCTACCTCAGAGGGCCAGGGGCCC...GGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCCTGGAAGGGACTGGGGGTTAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp TTCTTATCCACCTGCCTCCTTGGTCCCTTCAGGGAGGGGTCCCCGTCTCCGGGGGCTTTTCACCTGAGATaGGGAATGGGGGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: FLSTCLLGPFREGSPSPGAFHLR*GMGVAR
Trigger: CCTGGCCACCCCCATTCCTCATCTCAGGTGAAAAGC...CCCCGGAGACGGGGACCCCTCCCTGAAGGGACCAAGGAGGCAGGTGGATAAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp AAACAGGCTGGAGGTACAACTGAGAACAGTCCTACAAGGTTCTGGGGAGGGACAGGGGGAGCTGGGGACTaGGCTGCGGGCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: KQAGGTTENSPTRFWGGTGGAGD*AAGLLG
Trigger: GCCCAGGAGGCCCGCAGCTCAGTCCCCAGCTCCCCC...TGTCCCTCCCCAGAACCTTGTAGGACTGTTCTCAGTTGTACCTCCAGCCTGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR TCA 90 bp CTGCTCCAGAGGGGGCCCAAGGTGGGGTATACTTCAGAGGAAACAGGCTGGAGGGTACTCCAGGGCTTCTaGGGACCTCAGGGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: LLQRGPKVGYTSEETGWRVLQGF*GPQGPV
Trigger: CACAGGCCCCTGAGGTCCTCAGAAGCCCTGGAGTAC...CCTCCAGCCTGTTTCCTCTGAAGTATACCCCACCTTGGGCCCCCTCTGGAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR TCA 90 bp AGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGGCAGCTCCTTGGTaGGACAGGCTCCAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: RDWRAATQWPLTPSPFQEEAAPW*DRLQVH
Trigger: GTGGACCTGGAGCCTGTCTCACCAAGGAGCTGCCTC...TTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp AGTAGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGACAGGCTGTGAAGTGTaGGGTGGGCACTGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: SRDWRAATQWPLTPSPFQTGCEV*GGHWLG
Trigger: GCCGAGCCAGTGCCCACCTCACACTTCACAGCCTGT...CTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp CACTCTGCCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCCCCGAACAGCGAGTCGTAGAGTaGGTCACTGAGAGACTCCGA +
Preference number: 4 (lower is better)
Translates to: HSAFLGHVRSAGGAATPEQRVVE*VTERLR
Trigger: TCGGAGTCTCTCAGTGACTCACTCTACGACTCGCTG...TTCGGGGGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGGCAGAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR GCA 90 bp TTCTTATCCACCTGCCTCCTTGGTCCCTTCAGGGAGGGGTCCCCGTCTCCGGGGTGCCTGGCTCCATGCTaGCATCATCACCCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: FLSTCLLGPFREGSPSPGCLAPC*HHHPLL
Trigger: CAGGAGAGGGTGATGATGGCAGCATGGAGCCAGGCA...CCCCGGAGACGGGGACCCCTCCCTGAAGGGACCAAGGAGGCAGGTGGATAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR GCA 90 bp TTCTTATCCACCTGCCTCCTTGGTCCCTTCAGGGAGGGGTCCCCGTCTCCGGGGCCTGGCCTCAGCTGCTaGTCCCAACATACCTCTCTC +
Preference number: 4 (lower is better)
Translates to: FLSTCLLGPFREGSPSPGPGLSC*SQHTSL
Trigger: GAGAGAGGTATGTTGGGAGCAGCAGCTGAGGCCAGG...CCCCGGAGACGGGGACCCCTCCCTGAAGGGACCAAGGAGGCAGGTGGATAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR GCA 90 bp AGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGCCTTACAGTTGCCTGGGGTCCTaGGGCCGGGATGGGGAGACT +
Preference number: 4 (lower is better)
Translates to: RAATQWPLTPSPFQEEPYSCLGS*GRDGET
Trigger: AGTCTCCCCATCCCGGCCGCAGGACCCCAGGCAACT...GTAAGGCTCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp CACCACAAGATGGCTCAGCCTGAAGTAGGGACTGGAGGGCTGCGACACAGTGGCTGTCCCGCAGAGGTGTaGTGCCAGGATCCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: HHKMAQPEVGTGGLRHSGCPAEV*CQDPQV
Trigger: GACCTGGGGATCCTGGCAGCACACCTCTGCGGGACA...GCCACTGTGTCGCAGCCCTCCAGTCCCTACTTCAGGCTGAGCCATCTTGTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp CTGCTCCAGAGGGGGCCCAAGGTGGGGTATACTTCAGAGGAAACAGGCTGGAGGTGTCCCGCAGAGGTGTaGTGCCAGGATCCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: LLQRGPKVGYTSEETGWRCPAEV*CQDPQV
Trigger: GACCTGGGGATCCTGGCAGCACACCTCTGCGGGACA...CCTCCAGCCTGTTTCCTCTGAAGTATACCCCACCTTGGGCCCCCTCTGGAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR GCA 90 bp AGCTCCAGCGGGGCCGTGGCGTGGCGCAGCCCCTCAGCCCTGACTCCCACAAGAATAAGTCCAGGTTCCTaGTGCTTCAGGCTGTTTGTG +
Preference number: 4 (lower is better)
Translates to: SSSGAVAWRSPSALTPTRISPGS*CFRLFV
Trigger: CACAAACAGCCTGAAGCAGCAGGAACCTGGACTTAT...TCTTGTGGGAGTCAGGGCTGAGGGGCTGCGCCACGCCACGGCCCCGCTGGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR GCA 90 bp CACCACAAGATGGCTCAGCCTGAAGTAGGGACTGGAGGGCTGCGACACAGTGGCGGTACTACCACAGTCTaGCCAGGGAGGGCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: HHKMAQPEVGTGGLRHSGGTTTV*PGRALP
Trigger: GGGAAGGGCCCTCCCTGGGCAGACTGTGGTAGTACC...GCCACTGTGTCGCAGCCCTCCAGTCCCTACTTCAGGCTGAGCCATCTTGTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGGGACCCCCAGCTGGCTaGTCCATGGCCTCTGACATC +
Preference number: 4 (lower is better)
Translates to: DWRAATQWPLTPSPFQEEGPPAG*SMASDI
Trigger: GATGTCAGAGGCCATGGACCAGCCAGCTGGGGGTCC...CTCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR CCA 90 bp AGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGCCTTACGAGGCCGCCAGGGGGTaGCAGGTGAGCAGAGAAGCA +
Preference number: 4 (lower is better)
Translates to: RAATQWPLTPSPFQEEPYEAARG*QVSREA
Trigger: TGCTTCTCTGCTCACCTGCCACCCCCTGGCGGCCTC...GTAAGGCTCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR CCA 90 bp GACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGGGAGGAGCTGCTGCCTaGGGCACAGTTTGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: DWRAATQWPLTPSPFQEEGGAAA*GTVWAR
Trigger: TCTGGCCCAAACTGTGCCCCAGGCAGCAGCTCCTCC...CTCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGATGAGGAATGGGGGTaGCCAGGCCGAGAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: GLEGCDTVAFNPQSLPGRDEEWG*PGREPS
Trigger: ACTGGGCTCTCGGCCTGGCCACCCCCATTCCTCATC...TCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp TTCTTATCCACCTGCCTCCTTGGTCCCTTCAGGGAGGGGTCCCCGTCTCCGGGGACTAGGGGTGTGGACTaGGCCGTGGTACTACCACAG +
Preference number: 4 (lower is better)
Translates to: FLSTCLLGPFREGSPSPGTRGVD*AVVLPQ
Trigger: CTGTGGTAGTACCACGGCCCAGTCCACACCCCTAGT...CCCCGGAGACGGGGACCCCTCCCTGAAGGGACCAAGGAGGCAGGTGGATAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGACTCAGGGCCCTGACTTaGGTCAGTGGGGCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: GLEGCDTVAFNPQSLPGRLRALT*VSGARY
Trigger: GTACCTGGCCCCACTGACCCAAGTCAGGGCCCTGAG...TCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CACTCTGCCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCCCCGAATCAGAAGACACCGGCTaGAAATCCCCGTACTCAGGC +
Preference number: 4 (lower is better)
Translates to: HSAFLGHVRSAGGAATPESEDTG*KSPYSG
Trigger: GCCTGAGTACGGGGATTTCCAGCCGGTGTCTTCTGA...TTCGGGGGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGGCAGAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CCA 90 bp GGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGACAGAGATGGCACGGCTaGTGGGCAGGAAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GLEGCDTVAFNPQSLPGRQRWHG*WAGSPA
Trigger: TGCTGGGCTTCCTGCCCACCAGCCGTGCCATCTCTG...TCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGGCAACTTGTCCCCCTaGCCCCCAAACTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: GLEGCDTVAFNPQSLPGRGNLSP*PPNSTS
Trigger: GCTGGTGGAGTTTGGGGGCCAGGGGGACAAGTTGCC...TCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CAGTCCCTTCCAGGAAGAGCCTTACTCTGGGTGAGAGAAGGGACCAAGGGCGGGGGCAACTTGTCCCCCTaGCCCCCAAACTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: QSLPGRALLWVREGTKGGGNLSP*PPNSTS
Trigger: GCTGGTGGAGTTTGGGGGCCAGGGGGACAAGTTGCC...CCCGCCCTTGGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCCTGGAAGGGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGCTGGGGGCTGGGGGCTaGGCCAGGCGCTTCAATATA +
Preference number: 4 (lower is better)
Translates to: DWRAATQWPLTPSPFQEELGAGG*ARRFNI
Trigger: TATATTGAAGCGCCTGGCCCAGCCCCCAGCCCCCAG...CTCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGATCACCATGGGGGTCCTaGGCAGCCCCTCCAGTTGTC +
Preference number: 4 (lower is better)
Translates to: GLEGCDTVAFNPQSLPGRSPWGS*AAPPVV
Trigger: GACAACTGGAGGGGCTGCCCAGGACCCCCATGGTGA...TCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CCA 90 bp CCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCCCCGAAAGGTGGGCCTTACTGGAGAAACTaGTCTCCCCACATCACTCCC +
Preference number: 4 (lower is better)
Translates to: PSSAMSEVLGVRLPPKGGPYWRN*SPHITP
Trigger: GGGAGTGATGTGGGGAGACCAGTTTCTCCAGTAAGG...CCCACCTTTCGGGGGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR TCA 90 bp GGGGGCCTCCACATTTTATTAGGGATACGGCAGAAGCAGAGGCAGGAAGCAGAGGGAGGGGCTGCCGTCTaGGCCACTGTTCCGACAGGG +
Preference number: 4 (lower is better)
Translates to: GGLHILLGIRQKQRQEAEGGAAV*ATVPTG
Trigger: CCCTGTCGGAACAGTGGCTCAGACGGCAGCCCCTCC...CTCTGCTTCCTGCCTCTGCTTCTGCCGTATCCCTAATAAAATGTGGAGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp AGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGCCTTACGTACTCCAGGGCTTCTaGGGACCTCAGGGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: RAATQWPLTPSPFQEEPYVLQGF*GPQGPV
Trigger: CACAGGCCCCTGAGGTCCTCAGAAGCCCTGGAGTAC...GTAAGGCTCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp GGGGGCCTCCACATTTTATTAGGGATACGGCAGAAGCAGAGGCAGGAAGCAGAGCACCCCATTCTTCTCTaGGCCCAGGGCCCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: GGLHILLGIRQKQRQEAEHPILL*AQGPLG
Trigger: CCCGAGGGGGCCCTGGGCTCAGAGAAGAATGGGGTG...CTCTGCTTCCTGCCTCTGCTTCTGCCGTATCCCTAATAAAATGTGGAGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp GCGGGGTCTCTCCCTGAGCTGAGCACGGTCATCTCATCCGCCGAAGCAGTGGGTCACCACCTTGGTTGGTaGCTTGGAAGGGAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: AGSLPELSTVISSAEAVGHHLGW*LGRELG
Trigger: ACCAAGCTCCCTTCCAAGTCACCAACCAAGGTGGTG...ACCCACTGCTTCGGCGGATGAGATGACCGTGCTCAGCTCAGGGAGAGACCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp TTCTTATCCACCTGCCTCCTTGGTCCCTTCAGGGAGGGGTCCCCGTCTCCGGGGCAGCGAGTCGTAGAGTaGGTCACTGAGAGACTCCGA +
Preference number: 4 (lower is better)
Translates to: FLSTCLLGPFREGSPSPGQRVVE*VTERLR
Trigger: TCGGAGTCTCTCAGTGACTCACTCTACGACTCGCTG...CCCCGGAGACGGGGACCCCTCCCTGAAGGGACCAAGGAGGCAGGTGGATAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp CTGCTCCAGAGGGGGCCCAAGGTGGGGTATACTTCAGAGGAAACAGGCTGGAGGGGTCTCTCCCTGAGCTaGGCACGGTCATCTCATCCG +
Preference number: 4 (lower is better)
Translates to: LLQRGPKVGYTSEETGWRGLSLS*ARSSHP
Trigger: CGGATGAGATGACCGTGCTCAGCTCAGGGAGAGACC...CCTCCAGCCTGTTTCCTCTGAAGTATACCCCACCTTGGGCCCCCTCTGGAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR TCA 90 bp AGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAACAGAGGGTGCAGCACTaGGACTGTGCGACACACAGG +
Preference number: 4 (lower is better)
Translates to: RDWRAATQWPLTPSPFQEQRVQH*DCATHR
Trigger: CCTGTGTGTCGCACAGTCTCAGTGCTGCACCCTCTG...TTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR GCA 90 bp AGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGTTGGCCTGGGCAAGTaGCGAGTTCTCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: RDWRAATQWPLTPSPFQEVGLGK*RVLCLQ
Trigger: CTGGAGGCAGAGAACTCGGCACTTGCCCAGGCCAAC...TTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR GCA 90 bp GGGGGCCTCCACATTTTATTAGGGATACGGCAGAAGCAGAGGCAGGAAGCAGAGCCCATTGAGTGGGCCTaGAGCCCCGGCCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GGLHILLGIRQKQRQEAEPIEWA*SPGQEG
Trigger: GCCTTCCTGGCCGGGGCTGCAGGCCCACTCAATGGG...CTCTGCTTCCTGCCTCTGCTTCTGCCGTATCCCTAATAAAATGTGGAGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp TTCTTATCCACCTGCCTCCTTGGTCCCTTCAGGGAGGGGTCCCCGTCTCCGGGGGGGAGACTCCGAGCCTaGCTTGTCCAAACTCTTCTC +
Preference number: 4 (lower is better)
Translates to: FLSTCLLGPFREGSPSPGGRLRA*LVQTLL
Trigger: GAGAAGAGTTTGGACAAGGCAGGCTCGGAGTCTCCC...CCCCGGAGACGGGGACCCCTCCCTGAAGGGACCAAGGAGGCAGGTGGATAAGAA
61% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp GACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGCGAACCAGCTGGCGATaGTGCTGGTGTTGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: DWRAATQWPLTPSPFQEERTSWR*CWCCGA
Trigger: AGCACCGCAACACCAGCAGCATCGCCAGCTGGTTCG...CTCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp GACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGCTTCTCCTCTTCCAGTaGCCGACGCAGGTCTTCCGC +
Preference number: 4 (lower is better)
Translates to: DWRAATQWPLTPSPFQEELLLFQ*PTQVFR
Trigger: GCGGAAGACCTGCGTCGGGCACTGGAAGAGGAGAAG...CTCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp GGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGACTGCACCTTGGTACATaGCAGCCAGCTGGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: GLEGCDTVAFNPQSLPGRLHLGT*QPAGPA
Trigger: TGCAGGGCCAGCTGGCTGGCATGTACCAAGGTGCAG...TCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp GCTGGCCACTCTGCCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCACCCTGTTTAGCAGCTaGTGCATGAAGGTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: AGHSAFLGHVRSAGGAATTLFSS*CMKVSA
Trigger: TGCAGACACCTTCATGCAGCAGCTGCTAAACAGGGT...GGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGGCAGAGTGGCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR GCA 90 bp GCGGGGTCTCTCCCTGAGCTGAGCACGGTCATCTCATCCGCCGAAGCAGTGGGTGTGGGAAGGTCCCAATaGCACTGTCCAAGGTTCGAG +
Preference number: 4 (lower is better)
Translates to: AGSLPELSTVISSAEAVGVGRSQ*HCPRFE
Trigger: CTCGAACCTTGGACAGTGGCATTGGGACCTTCCCAC...ACCCACTGCTTCGGCGGATGAGATGACCGTGCTCAGCTCAGGGAGAGACCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp GCCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCCCCGAAAGGTGGCCTTTCCCTTTCCTCTaGTGCAATTCTCACCATGGG +
Preference number: 4 (lower is better)
Translates to: AFLGHVRSAGGAATPERWPFPFL*CNSHHG
Trigger: CCCATGGTGAGAATTGCAGCAGAGGAAAGGGAAAGG...CCACCTTTCGGGGGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CCA 90 bp GGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGACAGCTGGCTGGTCCATaGCCTCTGACATCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: GLEGCDTVAFNPQSLPGRQLAGP*PLTSGP
Trigger: AGGGCCAGATGTCAGAGGCCATGGACCAGCCAGCTG...TCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR CCA 90 bp GCGGGGTCTCTCCCTGAGCTGAGCACGGTCATCTCATCCGCCGAAGCAGTGGGTTCTCGCAGGTCCTTCTaGTTCAGCAACGCCTGTACC +
Preference number: 4 (lower is better)
Translates to: AGSLPELSTVISSAEAVGSRRSF*FSNACT
Trigger: GGTACAGGCGTTGCTGAACCAGAAGGACCTGCGAGA...ACCCACTGCTTCGGCGGATGAGATGACCGTGCTCAGCTCAGGGAGAGACCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR CCA 90 bp GGGGGCCTCCACATTTTATTAGGGATACGGCAGAAGCAGAGGCAGGAAGCAGAGGAGCTGCGGGCCTCCTaGGCTGGGGCTCTTCTCCGA +
Preference number: 4 (lower is better)
Translates to: GGLHILLGIRQKQRQEAEELRAS*AGALLR
Trigger: TCGGAGAAGAGCCCCAGCCCAGGAGGCCCGCAGCTC...CTCTGCTTCCTGCCTCTGCTTCTGCCGTATCCCTAATAAAATGTGGAGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp TTTAACCCCCAGTCCCTTCCAGGAAGAGCCTTACTCTGGGTGAGAGAAGGGACCGAGCTGCGGGCCTCCTaGGCTGGGGCTCTTCTCCGA +
Preference number: 4 (lower is better)
Translates to: FNPQSLPGRALLWVREGTELRAS*AGALLR
Trigger: TCGGAGAAGAGCCCCAGCCCAGGAGGCCCGCAGCTC...GGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCCTGGAAGGGACTGGGGGTTAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp AGTAGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGGATGGAGGTGGCTCTaGGGAAGGCCCCCTAAAGGT +
Preference number: 4 (lower is better)
Translates to: SRDWRAATQWPLTPSPFQGWRWL*GRPPKG
Trigger: ACCTTTAGGGGGCCTTCCCCAGAGCCACCTCCATCC...CTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGCCTGGCTGGGCTTCTTaGATGAGTTGCCTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: DWRAATQWPLTPSPFQEEPGWAS*MSCLGS
Trigger: GGACCCCAGGCAACTCATCCAAGAAGCCCAGCCAGG...CTCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp AGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGCCTTACCGCCGTCCTGACCCCTaGCTGGGCTTCTTGGATGAG +
Preference number: 4 (lower is better)
Translates to: RAATQWPLTPSPFQEEPYRRPDP*LGFLDE
Trigger: CTCATCCAAGAAGCCCAGCCAGGGGTCAGGACGGCG...GTAAGGCTCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAACTTGGAAGGGAGCTTaGTGGGGCTGCTGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: GLEGCDTVAFNPQSLPGRTWKGA*WGCCEG
Trigger: GCCCTCACAGCAGCCCCACCAAGCTCCCTTCCAAGT...TCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GCGGGGTCTCTCCCTGAGCTGAGCACGGTCATCTCATCCGCCGAAGCAGTGGGTGTCGAGGCACCACCTTaGTTGGTGACTTGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: AGSLPELSTVISSAEAVGVEAPP*LVTWKG
Trigger: TCCCTTCCAAGTCACCAACCAAGGTGGTGCCTCGAC...ACCCACTGCTTCGGCGGATGAGATGACCGTGCTCAGCTCAGGGAGAGACCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGTGTGGACTGGGCCGTaGTACTACCACAGTCTGCCC +
Preference number: 4 (lower is better)
Translates to: GLEGCDTVAFNPQSLPGRVWTGP*YYHSLP
Trigger: GGGCAGACTGTGGTAGTACCACGGCCCAGTCCACAC...TCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp AGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAACCTGACTTGGGTCAGTaGGGCCAGGTACTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: RDWRAATQWPLTPSPFQEPDLGQ*GQVLGV
Trigger: CACCCCTAGTACCTGGCCCCACTGACCCAAGTCAGG...TTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CACCACAAGATGGCTCAGCCTGAAGTAGGGACTGGAGGGCTGCGACACAGTGGCTCACCTTCTCCTCGATaGCTGAGTGTGGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: HHKMAQPEVGTGGLRHSGSPSPR*LSVGPA
Trigger: GGCTGGCCCCACACTCAGCCATCGAGGAGAAGGTGA...GCCACTGTGTCGCAGCCCTCCAGTCCCTACTTCAGGCTGAGCCATCTTGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GGGGGCCTCCACATTTTATTAGGGATACGGCAGAAGCAGAGGCAGGAAGCAGAGTCCCGCTCCAGTGTGTaGGCGCGGCGGGGGACTTTG +
Preference number: 4 (lower is better)
Translates to: GGLHILLGIRQKQRQEAESRSSV*ARRGTL
Trigger: CAAAGTCCCCCGCCGCGCCCACACACTGGAGCGGGA...CTCTGCTTCCTGCCTCTGCTTCTGCCGTATCCCTAATAAAATGTGGAGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CAGTCCCTTCCAGGAAGAGCCTTACTCTGGGTGAGAGAAGGGACCAAGGGCGGGCAGCTCCTCTATGCCTaGCACCTCCCGCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: QSLPGRALLWVREGTKGGQLLYA*HLPLQC
Trigger: ACACTGGAGCGGGAGGTGCCAGGCATAGAGGAGCTG...CCCGCCCTTGGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCCTGGAAGGGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGACTCCAGTTGTCGGGGTaGGCACATGAGAGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: GLEGCDTVAFNPQSLPGRLQLSG*AHERVR
Trigger: TCGGACCCTCTCATGTGCCCACCCCGACAACTGGAG...TCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GGGGGCCTCCACATTTTATTAGGGATACGGCAGAAGCAGAGGCAGGAAGCAGAGGGGCCATGGGGGTCCTaGGCAGCCCCTCCAGTTGTC +
Preference number: 4 (lower is better)
Translates to: GGLHILLGIRQKQRQEAEGPWGS*AAPPVV
Trigger: GACAACTGGAGGGGCTGCCCAGGACCCCCATGGCCC...CTCTGCTTCCTGCCTCTGCTTCTGCCGTATCCCTAATAAAATGTGGAGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR CCA 90 bp GGGGGCCTCCACATTTTATTAGGGATACGGCAGAAGCAGAGGCAGGAAGCAGAGAGCCGGTCCAGTCTGTaGTCCCCAGCTCCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: GGLHILLGIRQKQRQEAESRSSL*SPAPAG
Trigger: CCCCGCTGGAGCTGGGGACCACAGACTGGACCGGCT...CTCTGCTTCCTGCCTCTGCTTCTGCCGTATCCCTAATAAAATGTGGAGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GGGGGCCTCCACATTTTATTAGGGATACGGCAGAAGCAGAGGCAGGAAGCAGAGCGCCGAAGCAGTGGGTaGTGGGGTGTGCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: GGLHILLGIRQKQRQEAERRSSG*WGVPGT
Trigger: GGTCCCTGGCACACCCCACCACCCACTGCTTCGGCG...CTCTGCTTCCTGCCTCTGCTTCTGCCGTATCCCTAATAAAATGTGGAGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp AGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGCCTTACCTGGGGGCTGGGGGCTaGGCCAGGCGCTTCAATATA +
Preference number: 4 (lower is better)
Translates to: RAATQWPLTPSPFQEEPYLGAGG*ARRFNI
Trigger: TATATTGAAGCGCCTGGCCCAGCCCCCAGCCCCCAG...GTAAGGCTCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp TTTAACCCCCAGTCCCTTCCAGGAAGAGCCTTACTCTGGGTGAGAGAAGGGACCGCCGAAATCAGGTGTTaGGCTGGGCCAGGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: FNPQSLPGRALLWVREGTAEIRC*AGPGQA
Trigger: GGCCTGCCCTGGCCCAGCTCAACACCTGATTTCGGC...GGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCCTGGAAGGGACTGGGGGTTAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR TCA 90 bp TTTAACCCCCAGTCCCTTCCAGGAAGAGCCTTACTCTGGGTGAGAGAAGGGACCCTGACTGCGGGGGTCTaGGCTGTGTGGAGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: FNPQSLPGRALLWVREGTLTAGV*AVWSLG
Trigger: CCCCAGACTCCACACAGCTCAGACCCCCGCAGTCAG...GGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCCTGGAAGGGACTGGGGGTTAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp GGGGGCCTCCACATTTTATTAGGGATACGGCAGAAGCAGAGGCAGGAAGCAGAGTCCAGCACTCTCCCCTaGCTTCCCAGGTCCCCGGGT +
Preference number: 4 (lower is better)
Translates to: GGLHILLGIRQKQRQEAESSTLP*LPRSPG
Trigger: ACCCGGGGACCTGGGAAGTCAGGGGAGAGTGCTGGA...CTCTGCTTCCTGCCTCTGCTTCTGCCGTATCCCTAATAAAATGTGGAGGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp GACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGCCAGCTCCACTTTGGTaGGGCAGCTCCTTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: DWRAATQWPLTPSPFQEEPAPLW*GSSLVR
Trigger: TCTCACCAAGGAGCTGCCTCACCAAAGTGGAGCTGG...CTCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp CAGTCCCTTCCAGGAAGAGCCTTACTCTGGGTGAGAGAAGGGACCAAGGGCGGGTTGGTGGGGCTGCTGTaGGGGCTCTTATTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: QSLPGRALLWVREGTKGGLVGLL*GLLLGL
Trigger: CAAGCCCAATAAGAGCCCTCACAGCAGCCCCACCAA...CCCGCCCTTGGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCCTGGAAGGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp AGTAGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGTTGGTGGGGCTGCTGTaGGGGCTCTTATTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: SRDWRAATQWPLTPSPFQLVGLL*GLLLGL
Trigger: CAAGCCCAATAAGAGCCCTCACAGCAGCCCCACCAA...CTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp GACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGTCAGCTTGGAGATGTTaGGGCTCTCGGCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: DWRAATQWPLTPSPFQEESAWRC*GSRPPA
Trigger: AGCTGGAGGCCGAGAGCCTCAACATCTCCAAGCTGA...CTCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp TTTAACCCCCAGTCCCTTCCAGGAAGAGCCTTACTCTGGGTGAGAGAAGGGACCGCAGCCCCTCAGCCCTaGCTCCCACAAGAGGACAGC +
Preference number: 4 (lower is better)
Translates to: FNPQSLPGRALLWVREGTAAPQP*LPQEDS
Trigger: GCTGTCCTCTTGTGGGAGTCAGGGCTGAGGGGCTGC...GGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCCTGGAAGGGACTGGGGGTTAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp CACCACAAGATGGCTCAGCCTGAAGTAGGGACTGGAGGGCTGCGACACAGTGGCAGGTGCCTGGCTCCATaGTGCCATCATCACCCTCTC +
Preference number: 4 (lower is better)
Translates to: HHKMAQPEVGTGGLRHSGRCLAP*CHHHPL
Trigger: GAGAGGGTGATGATGGCAGCATGGAGCCAGGCACCT...GCCACTGTGTCGCAGCCCTCCAGTCCCTACTTCAGGCTGAGCCATCTTGTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR GCA 90 bp GCGGGGTCTCTCCCTGAGCTGAGCACGGTCATCTCATCCGCCGAAGCAGTGGGTCTCATTGGGGTCACCTaGCTCATCAGAAGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: AGSLPELSTVISSAEAVGLIGVT*LIRRGG
Trigger: TCCTCCTCTTCTGATGAGGCAGGTGACCCCAATGAG...ACCCACTGCTTCGGCGGATGAGATGACCGTGCTCAGCTCAGGGAGAGACCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp GACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGCCCTTGGCTTCTAGCTaGTCCAGTGGCCTGTGGATG +
Preference number: 4 (lower is better)
Translates to: DWRAATQWPLTPSPFQEEPLASS*SSGLWM
Trigger: CATCCACAGGCCACTGGAGCAGCTAGAAGCCAAGGG...CTCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp AGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGGAGCTTGGTGGGGCTaGTGTGAGGGCTCTTATTGG +
Preference number: 4 (lower is better)
Translates to: RDWRAATQWPLTPSPFQEGAWWG*CEGSYW
Trigger: CCAATAAGAGCCCTCACAGCAGCCCCACCAAGCTCC...TTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp TTCTTATCCACCTGCCTCCTTGGTCCCTTCAGGGAGGGGTCCCCGTCTCCGGGGACCTTCTTATCCACCTaGCTCCTTGGTCCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: FLSTCLLGPFREGSPSPGTFLST*LLGPFR
Trigger: CCTGAAGGGACCAAGGAGGCAGGTGGATAAGAAGGT...CCCCGGAGACGGGGACCCCTCCCTGAAGGGACCAAGGAGGCAGGTGGATAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp TTCTTATCCACCTGCCTCCTTGGTCCCTTCAGGGAGGGGTCCCCGTCTCCGGGGATGGCCTCTGACATCTaGCCCTGGGAACAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: FLSTCLLGPFREGSPSPGMASDI*PWEQGR
Trigger: TCTTCCTTGTTCCCAGGGCCAGATGTCAGAGGCCAT...CCCCGGAGACGGGGACCCCTCCCTGAAGGGACCAAGGAGGCAGGTGGATAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR CCA 90 bp GGGGGCCTCCACATTTTATTAGGGATACGGCAGAAGCAGAGGCAGGAAGCAGAGGGTAGCACCGAAGCCTaGCCTGTGGGCCTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GGLHILLGIRQKQRQEAEGSTEA*PVGLWG
Trigger: ACCCCAGAGGCCCACAGGCCAGGCTTCGGTGCTACC...CTCTGCTTCCTGCCTCTGCTTCTGCCGTATCCCTAATAAAATGTGGAGGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CACCACAAGATGGCTCAGCCTGAAGTAGGGACTGGAGGGCTGCGACACAGTGGCTTAGCTGTGGGTAGGTaGGCACCTGCAGTGGGGATG +
Preference number: 4 (lower is better)
Translates to: HHKMAQPEVGTGGLRHSGLAVGR*APAVGM
Trigger: CATCCCCACTGCAGGTGCCCACCTACCCACAGCTAA...GCCACTGTGTCGCAGCCCTCCAGTCCCTACTTCAGGCTGAGCCATCTTGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CAGTCCCTTCCAGGAAGAGCCTTACTCTGGGTGAGAGAAGGGACCAAGGGCGGGCTGAGGTTGGCACTTTaGCAGGGGTACGGGGTACCT +
Preference number: 4 (lower is better)
Translates to: QSLPGRALLWVREGTKGGLRLAL*QGYGVP
Trigger: AGGTACCCCGTACCCCTGCCAAAGTGCCAACCTCAG...CCCGCCCTTGGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCCTGGAAGGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CACCACAAGATGGCTCAGCCTGAAGTAGGGACTGGAGGGCTGCGACACAGTGGCCAGGTACTAGGGGTGTaGACTGGGCCGTGGTACTAC +
Preference number: 4 (lower is better)
Translates to: HHKMAQPEVGTGGLRHSGQVLGV*TGPWYY
Trigger: GTAGTACCACGGCCCAGTCCACACCCCTAGTACCTG...GCCACTGTGTCGCAGCCCTCCAGTCCCTACTTCAGGCTGAGCCATCTTGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CACCACAAGATGGCTCAGCCTGAAGTAGGGACTGGAGGGCTGCGACACAGTGGCACCATGGTCTGGGGGTaGGAAGGTCCCAATGCCACT +
Preference number: 4 (lower is better)
Translates to: HHKMAQPEVGTGGLRHSGTMVWG*EGPNAT
Trigger: AGTGGCATTGGGACCTTCCCACCCCCAGACCATGGT...GCCACTGTGTCGCAGCCCTCCAGTCCCTACTTCAGGCTGAGCCATCTTGTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp TTTAACCCCCAGTCCCTTCCAGGAAGAGCCTTACTCTGGGTGAGAGAAGGGACCCATCCGCCGAAGCAGTaGGTGGTGGGGTGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: FNPQSLPGRALLWVREGTHPPKQ*VVGCAR
Trigger: CCTGGCACACCCCACCACCCACTGCTTCGGCGGATG...GGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCCTGGAAGGGACTGGGGGTTAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp TTTAACCCCCAGTCCCTTCCAGGAAGAGCCTTACTCTGGGTGAGAGAAGGGACCGCTGGGCTTCTTGGATaGGTTGCCTGGGGTCCTGCG +
Preference number: 4 (lower is better)
Translates to: FNPQSLPGRALLWVREGTAGLLG*VAWGPA
Trigger: CGCAGGACCCCAGGCAACTCATCCAAGAAGCCCAGC...GGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCCTGGAAGGGACTGGGGGTTAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp GGGGGCCTCCACATTTTATTAGGGATACGGCAGAAGCAGAGGCAGGAAGCAGAGACAGGCTGTGAAGTGTaGGGTGGGCACTGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: GGLHILLGIRQKQRQEAETGCEV*GGHWLG
Trigger: GCCGAGCCAGTGCCCACCTCACACTTCACAGCCTGT...CTCTGCTTCCTGCCTCTGCTTCTGCCGTATCCCTAATAAAATGTGGAGGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp AGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGCCTTACCAAGATGGCTCAGCCTaGAGTAGGGACTGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: RAATQWPLTPSPFQEEPYQDGSA*SRDWRA
Trigger: AGCCCTCCAGTCCCTACTTCAGGCTGAGCCATCTTG...GTAAGGCTCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp GGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGACAACATACCTCTCTCTaGCCAGCACAGTGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: GLEGCDTVAFNPQSLPGRQHTSL*PAQCPR
Trigger: TCTGGGGCACTGTGCTGGGCAGAGAGAGGTATGTTG...TCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR GCA 90 bp GGGGGCCTCCACATTTTATTAGGGATACGGCAGAAGCAGAGGCAGGAAGCAGAGTGCTGGGGGTCCCACTaGTACCATGGTCTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: GGLHILLGIRQKQRQEAECWGSH*YHGLGV
Trigger: CACCCCCAGACCATGGTAGCAGTGGGACCCCCAGCA...CTCTGCTTCCTGCCTCTGCTTCTGCCGTATCCCTAATAAAATGTGGAGGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp AGTAGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGAGGGCACTCAGCATCTaGTTCTGCCGTTCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: SRDWRAATQWPLTPSPFQRALSI*FCRSRS
Trigger: TGACCTGGAACGGCAGAACCAGATGCTGAGTGCCCT...CTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR CCA 90 bp GACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGGTGTCCTCAAGGAGCTaGCCCAGGTTCAACTGTCTG +
Preference number: 4 (lower is better)
Translates to: DWRAATQWPLTPSPFQEEVSSRS*PRFNCL
Trigger: CAGACAGTTGAACCTGGGCCAGCTCCTTGAGGACAC...CTCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CAGTCCCTTCCAGGAAGAGCCTTACTCTGGGTGAGAGAAGGGACCAAGGGCGGGGTGTCCTCAAGGAGCTaGCCCAGGTTCAACTGTCTG +
Preference number: 4 (lower is better)
Translates to: QSLPGRALLWVREGTKGGVSSRS*PRFNCL
Trigger: CAGACAGTTGAACCTGGGCCAGCTCCTTGAGGACAC...CCCGCCCTTGGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCCTGGAAGGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CACCACAAGATGGCTCAGCCTGAAGTAGGGACTGGAGGGCTGCGACACAGTGGCGCAGGTCTTCCGCCTTaGCCATCAGCTTGGAGATGT +
Preference number: 4 (lower is better)
Translates to: HHKMAQPEVGTGGLRHSGAGLPP*PSAWRC
Trigger: ACATCTCCAAGCTGATGGCCAAGGCGGAAGACCTGC...GCCACTGTGTCGCAGCCCTCCAGTCCCTACTTCAGGCTGAGCCATCTTGTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp AGTAGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGAAGGTGTCTGCACCTTaGTACATGCCAGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SRDWRAATQWPLTPSPFQKVSAP*YMPASW
Trigger: CCAGCTGGCTGGCATGTACCAAGGTGCAGACACCTT...CTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CAGTCCCTTCCAGGAAGAGCCTTACTCTGGGTGAGAGAAGGGACCAAGGGCGGGGGGATCCAGCCGCGGTaGCTTGGTCTTAGGAAGATT +
Preference number: 4 (lower is better)
Translates to: QSLPGRALLWVREGTKGGGIQPR*LGLRKI
Trigger: AATCTTCCTAAGACCAAGCCACCGCGGCTGGATCCC...CCCGCCCTTGGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCCTGGAAGGGACTG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GGGGGCCTCCACATTTTATTAGGGATACGGCAGAAGCAGAGGCAGGAAGCAGAGCAGTTCTTGGCCAGCTaGACAGGAGGGGTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: GGLHILLGIRQKQRQEAEQFLAS*TGGVGP
Trigger: AGGCCCCACCCCTCCTGTCCAGCTGGCCAAGAACTG...CTCTGCTTCCTGCCTCTGCTTCTGCCGTATCCCTAATAAAATGTGGAGGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp CTGCTCCAGAGGGGGCCCAAGGTGGGGTATACTTCAGAGGAAACAGGCTGGAGGCAGGCCGTACCTTACTaGAGAAACTGGTCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: LLQRGPKVGYTSEETGWRQAVPY*RNWSPH
Trigger: GTGGGGAGACCAGTTTCTCCAGTAAGGTACGGCCTG...CCTCCAGCCTGTTTCCTCTGAAGTATACCCCACCTTGGGCCCCCTCTGGAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR TCA 90 bp AAACAGGCTGGAGGTACAACTGAGAACAGTCCTACAAGGTTCTGGGGAGGGACATCCGGGGGCTGGGCATaGAGAGAGCCGGTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: KQAGGTTENSPTRFWGGTSGGWA*REPVQS
Trigger: AGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGA...TGTCCCTCCCCAGAACCTTGTAGGACTGTTCTCAGTTGTACCTCCAGCCTGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR GCA 90 bp GGGGGCCTCCACATTTTATTAGGGATACGGCAGAAGCAGAGGCAGGAAGCAGAGGGCTCTTATTGGGCTTaGCCAGGCTTGGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GGLHILLGIRQKQRQEAEGSYWA*PGLGLR
Trigger: CCTCAGCCCCAAGCCTGGGCAAGCCCAATAAGAGCC...CTCTGCTTCCTGCCTCTGCTTCTGCCGTATCCCTAATAAAATGTGGAGGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp GACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGCTGCATGAAGGTGTCTaGACCTTGGTACATGCCAGC +
Preference number: 4 (lower is better)
Translates to: DWRAATQWPLTPSPFQEELHEGV*TLVHAS
Trigger: GCTGGCATGTACCAAGGTGCAGACACCTTCATGCAG...CTCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp GGGGGCCTCCACATTTTATTAGGGATACGGCAGAAGCAGAGGCAGGAAGCAGAGAATCAGGTGTTGAGCTaGGCCAGGGCAGGCCGGATC +
Preference number: 4 (lower is better)
Translates to: GGLHILLGIRQKQRQEAENQVLS*ARAGRI
Trigger: GATCCGGCCTGCCCTGGCCCAGCTCAACACCTGATT...CTCTGCTTCCTGCCTCTGCTTCTGCCGTATCCCTAATAAAATGTGGAGGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR CCA 90 bp GACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGTGGTTTTCGTTGGCCTaGGCAAGTGCCGAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: DWRAATQWPLTPSPFQEEWFSLA*ASAEFS
Trigger: AGAGAACTCGGCACTTGCCCAGGCCAACGAAAACCA...CTCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR CCA 90 bp GGGGGCCTCCACATTTTATTAGGGATACGGCAGAAGCAGAGGCAGGAAGCAGAGCTGGAGTGGAGTGAGTaGGATCTGAGGGAGCGAGCC +
Preference number: 4 (lower is better)
Translates to: GGLHILLGIRQKQRQEAELEWSE*DLRERA
Trigger: GGCTCGCTCCCTCAGATCCCACTCACTCCACTCCAG...CTCTGCTTCCTGCCTCTGCTTCTGCCGTATCCCTAATAAAATGTGGAGGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR CCA 90 bp AAACAGGCTGGAGGTACAACTGAGAACAGTCCTACAAGGTTCTGGGGAGGGACAGGTAGCACCGAAGCCTaGCCTGTGGGCCTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: KQAGGTTENSPTRFWGGTGSTEA*PVGLWG
Trigger: ACCCCAGAGGCCCACAGGCCAGGCTTCGGTGCTACC...TGTCCCTCCCCAGAACCTTGTAGGACTGTTCTCAGTTGTACCTCCAGCCTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CCA 90 bp TTTAACCCCCAGTCCCTTCCAGGAAGAGCCTTACTCTGGGTGAGAGAAGGGACCGCTCCCGCCAGCTCTTaGATGGCAGCTCCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: FNPQSLPGRALLWVREGTAPASS*MAAPCH
Trigger: ATGGCAAGGAGCTGCCATCCAAGAGCTGGCGGGAGC...GGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCCTGGAAGGGACTGGGGGTTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp TTTAACCCCCAGTCCCTTCCAGGAAGAGCCTTACTCTGGGTGAGAGAAGGGACCGTCCCACTGCTACCATaGTCTGGGGGTGGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: FNPQSLPGRALLWVREGTVPLLP*SGGGKV
Trigger: GACCTTCCCACCCCCAGACCATGGTAGCAGTGGGAC...GGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCCTGGAAGGGACTGGGGGTTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp TTTAACCCCCAGTCCCTTCCAGGAAGAGCCTTACTCTGGGTGAGAGAAGGGACCCCTCCTGGCCTCAGCTaGTGCTCCCAACATACCTCT +
Preference number: 4 (lower is better)
Translates to: FNPQSLPGRALLWVREGTPPGLS*CSQHTS
Trigger: AGAGGTATGTTGGGAGCAGCAGCTGAGGCCAGGAGG...GGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCCTGGAAGGGACTGGGGGTTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR GCA 90 bp GGGGGCCTCCACATTTTATTAGGGATACGGCAGAAGCAGAGGCAGGAAGCAGAGCCCTTGGCTTCTAGCTaGTCCAGTGGCCTGTGGATG +
Preference number: 4 (lower is better)
Translates to: GGLHILLGIRQKQRQEAEPLASS*SSGLWM
Trigger: CATCCACAGGCCACTGGAGCAGCTAGAAGCCAAGGG...CTCTGCTTCCTGCCTCTGCTTCTGCCGTATCCCTAATAAAATGTGGAGGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp CAGTCCCTTCCAGGAAGAGCCTTACTCTGGGTGAGAGAAGGGACCAAGGGCGGGACCCTGTTTAGCAGCTaGTGCATGAAGGTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: QSLPGRALLWVREGTKGGTLFSS*CMKVSA
Trigger: TGCAGACACCTTCATGCAGCAGCTGCTAAACAGGGT...CCCGCCCTTGGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCCTGGAAGGGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp GGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGATTCCCTTTCCTCTGCTaGAATTCTCACCATGGGGGT +
Preference number: 4 (lower is better)
Translates to: GLEGCDTVAFNPQSLPGRFPFLC*NSHHGG
Trigger: ACCCCCATGGTGAGAATTGCAGCAGAGGAAAGGGAA...TCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CCA 90 bp TTTAACCCCCAGTCCCTTCCAGGAAGAGCCTTACTCTGGGTGAGAGAAGGGACCCCTTGGTTGGTGACTTaGAAGGGAGCTTGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: FNPQSLPGRALLWVREGTPWLVT*KGAWWG
Trigger: GCCCCACCAAGCTCCCTTCCAAGTCACCAACCAAGG...GGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCCTGGAAGGGACTGGGGGTTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp TTTAACCCCCAGTCCCTTCCAGGAAGAGCCTTACTCTGGGTGAGAGAAGGGACCCCTCCTTGTTCTTGGTaGCCTCTGTGCGGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: FNPQSLPGRALLWVREGTPPCSW*PLCGGS
Trigger: TGAACCGCCGCACAGAGGCCACCAAGAACAAGGAGG...GGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCCTGGAAGGGACTGGGGGTTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp AGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGCCTTACGGAAGAGCCTTACTCTaGGTGAGAGAAGGGACCAAG +
Preference number: 4 (lower is better)
Translates to: RAATQWPLTPSPFQEEPYGRALL*VREGTK
Trigger: CTTGGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCC...GTAAGGCTCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp CTGCTCCAGAGGGGGCCCAAGGTGGGGTATACTTCAGAGGAAACAGGCTGGAGGGGCCAATTTGGAGCTTaGTTTTCACCTGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: LLQRGPKVGYTSEETGWRGQFGA*FSPEMR
Trigger: CCTCATCTCAGGTGAAAAGCAAGCTCCAAATTGGCC...CCTCCAGCCTGTTTCCTCTGAAGTATACCCCACCTTGGGCCCCCTCTGGAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR GCA 90 bp GGGGGCCTCCACATTTTATTAGGGATACGGCAGAAGCAGAGGCAGGAAGCAGAGGGGAGACTCCGAGCCTaGCTTGTCCAAACTCTTCTC +
Preference number: 4 (lower is better)
Translates to: GGLHILLGIRQKQRQEAEGRLRA*LVQTLL
Trigger: GAGAAGAGTTTGGACAAGGCAGGCTCGGAGTCTCCC...CTCTGCTTCCTGCCTCTGCTTCTGCCGTATCCCTAATAAAATGTGGAGGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp GGGGGCCTCCACATTTTATTAGGGATACGGCAGAAGCAGAGGCAGGAAGCAGAGAGTCCAGGTTCCTGCTaGTTCAGGCTGTTTGTGCCC +
Preference number: 4 (lower is better)
Translates to: GGLHILLGIRQKQRQEAESPGSC*FRLFVP
Trigger: GGGCACAAACAGCCTGAAGCAGCAGGAACCTGGACT...CTCTGCTTCCTGCCTCTGCTTCTGCCGTATCCCTAATAAAATGTGGAGGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CCA 90 bp AAACAGGCTGGAGGTACAACTGAGAACAGTCCTACAAGGTTCTGGGGAGGGACAGCTCCCGCCAGCTCTTaGATGGCAGCTCCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: KQAGGTTENSPTRFWGGTAPASS*MAAPCH
Trigger: ATGGCAAGGAGCTGCCATCCAAGAGCTGGCGGGAGC...TGTCCCTCCCCAGAACCTTGTAGGACTGTTCTCAGTTGTACCTCCAGCCTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CCA 90 bp AGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAAGTCCTACAAGGTTCTaGGGAGGGACAGAAACCTTT +
Preference number: 4 (lower is better)
Translates to: RDWRAATQWPLTPSPFQESPTRF*GGTETF
Trigger: AAAGGTTTCTGTCCCTCCCCAGAACCTTGTAGGACT...TTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR TCA 90 bp TTTAACCCCCAGTCCCTTCCAGGAAGAGCCTTACTCTGGGTGAGAGAAGGGACCTTAGCAGCTGCTGCATaGAGGTGTCTGCACCTTGGT +
Preference number: 4 (lower is better)
Translates to: FNPQSLPGRALLWVREGTLAAAA*RCLHLG
Trigger: ACCAAGGTGCAGACACCTTCATGCAGCAGCTGCTAA...GGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCCTGGAAGGGACTGGGGGTTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR TCA 90 bp AAACAGGCTGGAGGTACAACTGAGAACAGTCCTACAAGGTTCTGGGGAGGGACACAAGATGGCTCAGCCTaGAGTAGGGACTGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: KQAGGTTENSPTRFWGGTQDGSA*SRDWRA
Trigger: AGCCCTCCAGTCCCTACTTCAGGCTGAGCCATCTTG...TGTCCCTCCCCAGAACCTTGTAGGACTGTTCTCAGTTGTACCTCCAGCCTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR GCA 90 bp GGGGGCCTCCACATTTTATTAGGGATACGGCAGAAGCAGAGGCAGGAAGCAGAGACCTTCTTATCCACCTaGCTCCTTGGTCCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GGLHILLGIRQKQRQEAETFLST*LLGPFR
Trigger: CCTGAAGGGACCAAGGAGGCAGGTGGATAAGAAGGT...CTCTGCTTCCTGCCTCTGCTTCTGCCGTATCCCTAATAAAATGTGGAGGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR GCA 90 bp AAACAGGCTGGAGGTACAACTGAGAACAGTCCTACAAGGTTCTGGGGAGGGACAAGTCCAGGTTCCTGCTaGTTCAGGCTGTTTGTGCCC +
Preference number: 4 (lower is better)
Translates to: KQAGGTTENSPTRFWGGTSPGSC*FRLFVP
Trigger: GGGCACAAACAGCCTGAAGCAGCAGGAACCTGGACT...TGTCCCTCCCCAGAACCTTGTAGGACTGTTCTCAGTTGTACCTCCAGCCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR GCA 90 bp TTTAACCCCCAGTCCCTTCCAGGAAGAGCCTTACTCTGGGTGAGAGAAGGGACCATAAGTCCAGGTTCCTaGTGCTTCAGGCTGTTTGTG +
Preference number: 4 (lower is better)
Translates to: FNPQSLPGRALLWVREGTISPGS*CFRLFV
Trigger: CACAAACAGCCTGAAGCAGCAGGAACCTGGACTTAT...GGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCCTGGAAGGGACTGGGGGTTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp CAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCAGCAGCAGGCCTCCCAGGTaGCCAGGGCCTAGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: QHGGLQEGLARASGQRSSSRPPR*PGPSSR
Trigger: CCTGCTGCTAGGCCCTGGCAACCTGGGAGGCCTGCT...GCTGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR CAA 90 bp CCTGGCCCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCGCCCCCTCCTTGTTCTaGGTGGCCTCTGTGCGGCGG +
Preference number: 5 (lower is better)
Translates to: PGPQTPPARGPPGGPREGAPSLF*VASVRR
Trigger: CCGCCGCACAGAGGCCACCAAGAACAAGGAGGGGGC...GCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGGGCCAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp CCTGGCCCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCGGCTTCTTGGATGAGTaGCCTGGGGTCCTGCGGCCG +
Preference number: 5 (lower is better)
Translates to: PGPQTPPARGPPGGPREGGFLDE*PGVLRP
Trigger: CGGCCGCAGGACCCCAGGCAACTCATCCAAGAAGCC...GCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGGGCCAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp CAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCAGCGGCTTGGGGGACTCCTaGGTGACTAGCGGAGCCCCA +
Preference number: 5 (lower is better)
Translates to: QHGGLQEGLARASGQRSSGLGDS*VTSGAP
Trigger: TGGGGCTCCGCTAGTCACCAAGGAGTCCCCCAAGCC...GCTGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp CAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCAGCCCTCAGGGCCCTGACTaGGGTCAGTGGGGCCAGGTA +
Preference number: 5 (lower is better)
Translates to: QHGGLQEGLARASGQRSSPQGPD*GQWGQV
Trigger: TACCTGGCCCCACTGACCCAAGTCAGGGCCCTGAGG...GCTGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp GTAGGGGACGGGCGGCTGGGCTCCTGGCTTCGCTTCCGGTCCACGGGCAGGGCCGCGATGCTGCTGGTGTaGCGGTGCTTGACCTCGGCG +
Preference number: 5 (lower is better)
Translates to: VGDGRLGSWLRFRSTGRAAMLLV*RCLTSA
Trigger: CGCCGAGGTCAAGCACCGCAACACCAGCAGCATCGC...GGCCCTGCCCGTGGACCGGAAGCGAAGCCAGGAGCCCAGCCGCCCGTCCCCTAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS TCA 90 bp CCAGGGCCTAGCAGCAGGCAGGGCGCCCAGGGTGAGGGTTCAGGCTaGGGCGGGCCACACAGCTCGCCGTTGATGGGCTCTGGGGAGCCA +
Preference number: 5 (lower is better)
Translates to: PGPSSRQGAQGEGSG*GGPHSSPLMGSGEP
Trigger: TGGCTCCCCAGAGCCCATCAACGGCGAGCTGTGTGGCCCGCCTCAGCCTGAACCCTCACCCTGGGCGCCCTGCCTGCTGCTAGGCCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR CAA 90 bp GGGGGCCCCCGCTGGCCACTCTGCCTTCCTCGGCCATGTCCGAAGTGCTGGGGGGGCTTCTTGGATGAGTaGCCTGGGGTCCTGCGGCCG +
Preference number: 5 (lower is better)
Translates to: GGPRWPLCLPRPCPKCWGGFLDE*PGVLRP
Trigger: CGGCCGCAGGACCCCAGGCAACTCATCCAAGAAGCC...CCCCCAGCACTTCGGACATGGCCGAGGAAGGCAGAGTGGCCAGCGGGGGCCCCC
71% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CAA 90 bp CCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCGATGCTGCTGGTGTaGCGGTGCTTGACCTCGGCG +
Preference number: 5 (lower is better)
Translates to: PQTPPARGPPGGPREGFGAMLLV*RCLTSA
Trigger: CGCCGAGGTCAAGCACCGCAACACCAGCAGCATCGC...CCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp CTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGGGGAAGGTCCAGTTCTaGGCCAGCTGGACAGGAGGG +
Preference number: 5 (lower is better)
Translates to: LHQHGGLQEGLARASGQRGKVQF*ASWTGG
Trigger: CCCTCCTGTCCAGCTGGCCAAGAACTGGACCTTCCC...CCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS TCA 90 bp GGCACAGGGCCCCTGCCAGCCGGCTCTTGGCCAGCTCCACTTTGGTaGGGCAGCTCCTTGGTGAGACAGGCTCCAGGTCCACCCGGGCCC +
Preference number: 5 (lower is better)
Translates to: GTGPLPAGSWPAPLW*GSSLVRQAPGPPGP
Trigger: GGGCCCGGGTGGACCTGGAGCCTGTCTCACCAAGGAGCTGCCTCACCAAAGTGGAGCTGGCCAAGAGCCGGCTGGCAGGGGCCCTGTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp ACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCATCCCGCTGGTTTTCGTaGGCCTGGGCAAGTGCCGAG +
Preference number: 5 (lower is better)
Translates to: TSTGASRRASRGLRGRGASRWFS*AWASAE
Trigger: CTCGGCACTTGCCCAGGCCAACGAAAACCAGCGGGA...TGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR CAA 90 bp CCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGGCTTGGGGCTGAGGTaGGCACTTTGGCAGGGGTAC +
Preference number: 5 (lower is better)
Translates to: PQTPPARGPPGGPREGFGGLGLR*ALWQGY
Trigger: GTACCCCTGCCAAAGTGCCAACCTCAGCCCCAAGCC...CCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp GGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCCGGGCAGCCCCTCCAGTaGTCGGGGTGGGCACATGAG +
Preference number: 5 (lower is better)
Translates to: GPRLRGLGMKRAGPVCGPGQPLQ*SGWAHE
Trigger: CTCATGTGCCCACCCCGACAACTGGAGGGGCTGCCC...GGGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp CAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCAGCTATCCACCTGCCTCCTaGGTCCCTTCAGGGAGGGGT +
Preference number: 5 (lower is better)
Translates to: QHGGLQEGLARASGQRSSYPPAS*VPSGRG
Trigger: ACCCCTCCCTGAAGGGACCAAGGAGGCAGGTGGATA...GCTGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS TCA 90 bp CTCCCTGGCTCGCTGCTCGGCTTTCCAGGAGGTTTTCCGCAGCCCTaGAGAGGGCCCACCAGGCCATTCCGGGGCCCACAGGCTGGCCAG +
Preference number: 5 (lower is better)
Translates to: LPGSLLGFPGGFPQP*RGPTRPFRGPQAGQ
Trigger: CTGGCCAGCCTGTGGGCCCCGGAATGGCCTGGTGGGCCCTCTTCAGGGCTGCGGAAAACCTCCTGGAAAGCCGAGCAGCGAGCCAGGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CCA 90 bp GGTGGCCCGGAGCAGCGGGTAGCAGTGCAGGGAAGGCTGGCATGCTaGGGTGCCGCCCACTCACCAGCAGCTCCTCTATGCCTGGCACCT +
Preference number: 5 (lower is better)
Translates to: GGPEQRVAVQGRLAC*GAAHSPAAPLCLAP
Trigger: AGGTGCCAGGCATAGAGGAGCTGCTGGTGAGTGGGCGGCACCCCAGCATGCCAGCCTTCCCTGCACTGCTACCCGCTGCTCCGGGCCACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp CCTGGCCCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCGACTTGGGGAGGCCTTaGGACTTAGACAGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: PGPQTPPARGPPGGPREGDLGRP*DLDSCG
Trigger: CCCACAGCTGTCTAAGTCCAAAGGCCTCCCCAAGTC...GCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGGGCCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp GGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCCGGCTTGGGGGACTCCTaGGTGACTAGCGGAGCCCCA +
Preference number: 5 (lower is better)
Translates to: GPRLRGLGMKRAGPVCGPGLGDS*VTSGAP
Trigger: TGGGGCTCCGCTAGTCACCAAGGAGTCCCCCAAGCC...GGGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS GCA 90 bp CTCTTCTTAAGGCCGAACCAGCTGGCGATGCTGCTGGTGTTGCGGTaGTTGACCTCGGCGCCAGGGGCTCGCTCCTGGCCCTGGAGCCGC +
Preference number: 5 (lower is better)
Translates to: LFLRPNQLAMLLVLR*LTSAPGARSWPWSR
Trigger: GCGGCTCCAGGGCCAGGAGCGAGCCCCTGGCGCCGAGGTCAAGCACCGCAACACCAGCAGCATCGCCAGCTGGTTCGGCCTTAAGAAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CCA 90 bp TGCGGGCCAGGGCACCGAGCAGGGTGTCGGGGCTGGGTGCCTCATTaGGGTCACCTGCCTCATCAGAAGAGGAGGAGGAGCTGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: CGPGHRAGCRGWVPH*GHLPHQKRRRSCCL
Trigger: CAGGCAGCAGCTCCTCCTCCTCTTCTGATGAGGCAGGTGACCCCAATGAGGCACCCAGCCCCGACACCCTGCTCGGTGCCCTGGCCCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp GGGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCCCCTGGCTGGGCTTCTaGGATGAGTTGCCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: GSPSPGAGHEESRSSLWSPWLGF*DELPGV
Trigger: GACCCCAGGCAACTCATCCAAGAAGCCCAGCCAGGG...GGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp CTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGTTCAGCGCTGGCAGCTaGCTCTTCTTAAGGCCGAAC +
Preference number: 5 (lower is better)
Translates to: LHQHGGLQEGLARASGQRFSAGS*LFLRPN
Trigger: GTTCGGCCTTAAGAAGAGCAAGCTGCCAGCGCTGAA...CCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp CCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCCTTGGCCATCAGCTaGGAGATGTTGAGGCTCTCG +
Preference number: 5 (lower is better)
Translates to: PQTPPARGPPGGPREGFGALAIS*EMLRLS
Trigger: CGAGAGCCTCAACATCTCCAAGCTGATGGCCAAGGC...CCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp GGGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCGGGAAGGTCCAGTTCTaGGCCAGCTGGACAGGAGGG +
Preference number: 5 (lower is better)
Translates to: GSPSPGAGHEESRSSLWSGKVQF*ASWTGG
Trigger: CCCTCCTGTCCAGCTGGCCAAGAACTGGACCTTCCC...GGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CCA 90 bp CCTCAGGGCCCTGACTTGGGTCAGTGGGGCCAGGTACTAGGGGTGTaGACTGGGCCGTGGTACTACCACAGTCTGCCCAGGGAGGGCCCT +
Preference number: 5 (lower is better)
Translates to: PQGPDLGQWGQVLGV*TGPWYYHSLPREGP
Trigger: AGGGCCCTCCCTGGGCAGACTGTGGTAGTACCACGGCCCAGTCCACACCCCTAGTACCTGGCCCCACTGACCCAAGTCAGGGCCCTGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CCA 90 bp CTGCTGGTGTTGCGGTGCTTGACCTCGGCGCCAGGGGCTCGCTCCTaGCCCTGGAGCCGCAGCACGTTCTCCTCAATGCCCTTCATCACC +
Preference number: 5 (lower is better)
Translates to: LLVLRCLTSAPGARS*PWSRSTFSSMPFIT
Trigger: GGTGATGAAGGGCATTGAGGAGAACGTGCTGCGGCTCCAGGGCCAGGAGCGAGCCCCTGGCGCCGAGGTCAAGCACCGCAACACCAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp CCTGGCCCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCGGCAGCTTTAGAAACTaGAGACCCCTAGCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: PGPQTPPARGPPGGPREGGSFRN*RPLAGE
Trigger: CTCTCCAGCTAGGGGTCTCAAGTTTCTAAAGCTGCC...GCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGGGCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp GGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCCGTGTGGAGTCTGGGGTaGTGTAGCAGGGTGAAGGGC +
Preference number: 5 (lower is better)
Translates to: GPRLRGLGMKRAGPVCGPVWSLG*CSRVKG
Trigger: GCCCTTCACCCTGCTACACAACCCCAGACTCCACAC...GGGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp AGCTCCAGCGGGGCCGTGGCGTGGCGCAGCCCCTCAGCCCTGACTCCCACAAGAACCTTGGTTGGTGACTaGGAAGGGAGCTTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: SSSGAVAWRSPSALTPTRTLVGD*EGSLVG
Trigger: CCCCACCAAGCTCCCTTCCAAGTCACCAACCAAGGT...TCTTGTGGGAGTCAGGGCTGAGGGGCTGCGCCACGCCACGGCCCCGCTGGAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CAA 90 bp AGCTCCAGCGGGGCCGTGGCGTGGCGCAGCCCCTCAGCCCTGACTCCCACAAGAGAGGCACCACCTTGGTaGGTGACTTGGAAGGGAGCT +
Preference number: 5 (lower is better)
Translates to: SSSGAVAWRSPSALTPTREAPPW*VTWKGA
Trigger: AGCTCCCTTCCAAGTCACCAACCAAGGTGGTGCCTC...TCTTGTGGGAGTCAGGGCTGAGGGGCTGCGCCACGCCACGGCCCCGCTGGAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CAA 90 bp GCGGGGTCTCTCCCTGAGCTGAGCACGGTCATCTCATCCGCCGAAGCAGTGGGTGCCCCCTCCTTGTTCTaGGTGGCCTCTGTGCGGCGG +
Preference number: 5 (lower is better)
Translates to: AGSLPELSTVISSAEAVGAPSLF*VASVRR
Trigger: CCGCCGCACAGAGGCCACCAAGAACAAGGAGGGGGC...ACCCACTGCTTCGGCGGATGAGATGACCGTGCTCAGCTCAGGGAGAGACCCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp ACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGCAGAGGAGCATCCAGCCGCGGTGGCTaGGTCTTAGGAAGATTCTTG +
Preference number: 5 (lower is better)
Translates to: TSTGASRRASRGLRGRGASSRGG*VLGRFL
Trigger: CAAGAATCTTCCTAAGACCAAGCCACCGCGGCTGGA...TGCTCCTCTGCCCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp GGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCCTATCCACCTGCCTCCTaGGTCCCTTCAGGGAGGGGT +
Preference number: 5 (lower is better)
Translates to: GPRLRGLGMKRAGPVCGPYPPAS*VPSGRG
Trigger: ACCCCTCCCTGAAGGGACCAAGGAGGCAGGTGGATA...GGGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS GCA 90 bp CCCGCAGTCGGTGCAGAAGCTCCTGGCAGGTGCCTGGCTCCATGCTaGCATCATCACCCTCTCCTGGCCTTGGGTTTCCAGGACCCCCAG +
Preference number: 5 (lower is better)
Translates to: PAVGAEAPGRCLAPC*HHHPLLALGFQDPQ
Trigger: CTGGGGGTCCTGGAAACCCAAGGCCAGGAGAGGGTGATGATGGCAGCATGGAGCCAGGCACCTGCCAGGAGCTTCTGCACCGACTGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335999.7
ENST00000477361.1
ENST00000491441.1
CDS GCA 90 bp CAACTGTCTGCGGGCCAGGGCACCGAGCAGGGTGTCGGGGCTGGGTaGCTCATTGGGGTCACCTGCCTCATCAGAAGAGGAGGAGGAGCT +
Preference number: 5 (lower is better)
Translates to: QLSAGQGTEQGVGAG*LIGVTCLIRRGGGA
Trigger: AGCTCCTCCTCCTCTTCTGATGAGGCAGGTGACCCCAATGAGGCACCCAGCCCCGACACCCTGCTCGGTGCCCTGGCCCGCAGACAGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS GCA 90 bp GGAGGGCCGCTCACAGGGCATCCCAGGGGTCCTCCTCCCAGAGGGTaGAGCACTGAGACTGTGCGACACACAGGCCGTACCTTACTGGAG +
Preference number: 5 (lower is better)
Translates to: GGPLTGHPRGPPPRG*STETVRHTGRTLLE
Trigger: CTCCAGTAAGGTACGGCCTGTGTGTCGCACAGTCTCAGTGCTGCACCCTCTGGGAGGAGGACCCCTGGGATGCCCTGTGAGCGGCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS GCA 90 bp TGGGGCCTGGCGCCCTTAGCTCTAGCTCTGGCTCCAGTGCTCACTTaGTGGGTTATCCCAGGGCAAGGTCCCGATCCCTGGGCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: WGLAPLALALAPVLT*WVIPGQGPDPWASG
Trigger: GCCTGAGGCCCAGGGATCGGGACCTTGCCCTGGGATAACCCAGCAAGTGAGCACTGGAGCCAGAGCTAGAGCTAAGGGCGCCAGGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477361.1
ENST00000491441.1
CDS CCA 90 bp GCCGAGTTCTCTGCCTCCAGCTCCCGCAGTCGGTGCAGAAGCTCCTaGCAGGTGCCTGGCTCCATGCTGCCATCATCACCCTCTCCTGGC +
Preference number: 5 (lower is better)
Translates to: AEFSASSSRSRCRSS*QVPGSMLPSSPSPG
Trigger: GCCAGGAGAGGGTGATGATGGCAGCATGGAGCCAGGCACCTGCCAGGAGCTTCTGCACCGACTGCGGGAGCTGGAGGCAGAGAACTCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335999.7
ENST00000477361.1
ENST00000491441.1
CDS CCA 90 bp GGTTCAACTGTCTGCGGGCCAGGGCACCGAGCAGGGTGTCGGGGCTaGGTGCCTCATTGGGGTCACCTGCCTCATCAGAAGAGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: GSTVCGPGHRAGCRG*VPHWGHLPHQKRRR
Trigger: CCTCCTCCTCTTCTGATGAGGCAGGTGACCCCAATGAGGCACCCAGCCCCGACACCCTGCTCGGTGCCCTGGCCCGCAGACAGTTGAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CCA 90 bp GTGTTGCGGTGCTTGACCTCGGCGCCAGGGGCTCGCTCCTGGCCCTaGAGCCGCAGCACGTTCTCCTCAATGCCCTTCATCACCTTCTCC +
Preference number: 5 (lower is better)
Translates to: VLRCLTSAPGARSWP*SRSTFSSMPFITFS
Trigger: GGAGAAGGTGATGAAGGGCATTGAGGAGAACGTGCTGCGGCTCCAGGGCCAGGAGCGAGCCCCTGGCGCCGAGGTCAAGCACCGCAACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CCA 90 bp GGCCTGGCGCCCTTAGCTCTAGCTCTGGCTCCAGTGCTCACTTGCTaGGTTATCCCAGGGCAAGGTCCCGATCCCTGGGCCTCAGGCTCC +
Preference number: 5 (lower is better)
Translates to: GLAPLALALAPVLTC*VIPGQGPDPWASGS
Trigger: GGAGCCTGAGGCCCAGGGATCGGGACCTTGCCCTGGGATAACCCAGCAAGTGAGCACTGGAGCCAGAGCTAGAGCTAAGGGCGCCAGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477361.1
ENST00000491441.1
CDS-3UTR CAA 90 bp CAGTCCCTTCCAGGAAGAGCCTTACTCTGGGTGAGAGAAGGGACCAAGGGCGGGCCTGGGTGGTCCCCATaGAGTGGGCCTGCAGCCCCG +
Preference number: 5 (lower is better)
Translates to: QSLPGRALLWVREGTKGGPGWSP*SGPAAP
Trigger: CGGGGCTGCAGGCCCACTCAATGGGGACCACCCAGG...CCCGCCCTTGGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCCTGGAAGGGACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp CCCCAAACTCCACCAGCACGGGGGCCTCCAGGAGGGCCTCGCGAGGGCTTCGGGGGCTCTTCTCCGAGGTaGGAGGCAGCTTTAGAAACT +
Preference number: 5 (lower is better)
Translates to: PQTPPARGPPGGPREGFGGSSPR*EAALET
Trigger: AGTTTCTAAAGCTGCCTCCAACCTCGGAGAAGAGCC...CCCGAAGCCCTCGCGAGGCCCTCCTGGAGGCCCCCGTGCTGGTGGAGTTTGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp TTCTTATCCACCTGCCTCCTTGGTCCCTTCAGGGAGGGGTCCCCGTCTCCGGGGCCTCAGGGCCCTGACTaGGGTCAGTGGGGCCAGGTA +
Preference number: 5 (lower is better)
Translates to: FLSTCLLGPFREGSPSPGPQGPD*GQWGQV
Trigger: TACCTGGCCCCACTGACCCAAGTCAGGGCCCTGAGG...CCCCGGAGACGGGGACCCCTCCCTGAAGGGACCAAGGAGGCAGGTGGATAAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp GGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCCGCCTTGGCCATCAGCTaGGAGATGTTGAGGCTCTCG +
Preference number: 5 (lower is better)
Translates to: GPRLRGLGMKRAGPVCGPALAIS*EMLRLS
Trigger: CGAGAGCCTCAACATCTCCAAGCTGATGGCCAAGGC...GGGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp GCTGGCCACTCTGCCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCCGCAGGTCTTCCGCCTaGGCCATCAGCTTGGAGATG +
Preference number: 5 (lower is better)
Translates to: AGHSAFLGHVRSAGGAATRRSSA*AISLEM
Trigger: CATCTCCAAGCTGATGGCCAAGGCGGAAGACCTGCG...GGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGGCAGAGTGGCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CAA 90 bp GCGGGGTCTCTCCCTGAGCTGAGCACGGTCATCTCATCCGCCGAAGCAGTGGGTTCCCCGTACTCAGGCTaGGGCTCCCGCCAGCTCTTG +
Preference number: 5 (lower is better)
Translates to: AGSLPELSTVISSAEAVGSPYSG*GSRQLL
Trigger: CAAGAGCTGGCGGGAGCCCAAGCCTGAGTACGGGGA...ACCCACTGCTTCGGCGGATGAGATGACCGTGCTCAGCTCAGGGAGAGACCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS TCA 90 bp CCCAGGGAGGGCCCTTCCCTTTGTCAGGCTTGGGGGACTCCTTGGTaGCTAGCGGAGCCCCAGGTCGAGGCACCACCTTGGTTGGTGACT +
Preference number: 5 (lower is better)
Translates to: PREGPSLCQAWGTPW*LAEPQVEAPPWLVT
Trigger: AGTCACCAACCAAGGTGGTGCCTCGACCTGGGGCTCCGCTAGTCACCAAGGAGTCCCCCAAGCCTGACAAAGGGAAGGGCCCTCCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS GCA 90 bp TCTCTGCCTCCAGCTCCCGCAGTCGGTGCAGAAGCTCCTGGCAGGTaGCTGGCTCCATGCTGCCATCATCACCCTCTCCTGGCCTTGGGT +
Preference number: 5 (lower is better)
Translates to: SLPPAPAVGAEAPGR*LAPCCHHHPLLALG
Trigger: ACCCAAGGCCAGGAGAGGGTGATGATGGCAGCATGGAGCCAGGCACCTGCCAGGAGCTTCTGCACCGACTGCGGGAGCTGGAGGCAGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335999.7
ENST00000477361.1
ENST00000491441.1
CDS GCA 90 bp GGTAAGACTCTGTGTCCTCAAGGAGCTGGCCCAGGTTCAACTGTCTaGGGGCCAGGGCACCGAGCAGGGTGTCGGGGCTGGGTGCCTCAT +
Preference number: 5 (lower is better)
Translates to: GKTLCPQGAGPGSTV*GPGHRAGCRGWVPH
Trigger: ATGAGGCACCCAGCCCCGACACCCTGCTCGGTGCCCTGGCCCGCAGACAGTTGAACCTGGGCCAGCTCCTTGAGGACACAGAGTCTTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CCA 90 bp GGGTTTCCAGGACCCCCAGCTGGCTGGTCCATGGCCTCTGACATCTaGCCCTGGGAACAAGGAAGAGAAGCCCCGGCAGGCTGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: GFPGPPAGWSMASDI*PWEQGREAPAGCLC
Trigger: GCAGAGACAGCCTGCCGGGGCTTCTCTTCCTTGTTCCCAGGGCCAGATGTCAGAGGCCATGGACCAGCCAGCTGGGGGTCCTGGAAACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS CCA 90 bp TGCCTCCAGCTCCCGCAGTCGGTGCAGAAGCTCCTGGCAGGTGCCTaGCTCCATGCTGCCATCATCACCCTCTCCTGGCCTTGGGTTTCC +
Preference number: 5 (lower is better)
Translates to: CLQLPQSVQKLLAGA*LHAAIITLSWPWVS
Trigger: GGAAACCCAAGGCCAGGAGAGGGTGATGATGGCAGCATGGAGCCAGGCACCTGCCAGGAGCTTCTGCACCGACTGCGGGAGCTGGAGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335999.7
ENST00000477361.1
ENST00000491441.1
CDS CCA 90 bp ATTGGGGTCACCTGCCTCATCAGAAGAGGAGGAGGAGCTGCTGCCTaGGGCACAGTTTGGGCCAGAGCTGGTGCCCTGGGCCTGAGGAGG +
Preference number: 5 (lower is better)
Translates to: IGVTCLIRRGGGAAA*GTVWARAGALGLRR
Trigger: CCTCCTCAGGCCCAGGGCACCAGCTCTGGCCCAAACTGTGCCCCAGGCAGCAGCTCCTCCTCCTCTTCTGATGAGGCAGGTGACCCCAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS CCA 90 bp GGGTTTCCAGGACCCCCAGCTGGCTGGTCCATGGCCTCTGACATCTaGCCCTGGGAACAAGGAAGAGAAGCCCCGGCAGGCTACTCCAGG +
Preference number: 5 (lower is better)
Translates to: GFPGPPAGWSMASDI*PWEQGREAPAGYSR
Trigger: CCTGGAGTAGCCTGCCGGGGCTTCTCTTCCTTGTTCCCAGGGCCAGATGTCAGAGGCCATGGACCAGCCAGCTGGGGGTCCTGGAAACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000477361.1
ENST00000491441.1
CDS CCA 90 bp CGCGAGCTAAGTCTGCCCGGCCGGCGCGCGCCGCTTCCGCTTTGGTaGGAAGGACCTCCCTTCCCCCTTATAGAAACACTTTCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: RELSLPGRRAPLPLW*EGPPFPLIETLSPG
Trigger: GCCTGGAGAAAGTGTTTCTATAAGGGGGAAGGGAGGTCCTTCCCACCAAAGCGGAAGCGGCGCGCGCCGGCCGGGCAGACTTAGCTCGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480927.1
CDS-3UTR CAA 90 bp GCGGGGTCTCTCCCTGAGCTGAGCACGGTCATCTCATCCGCCGAAGCAGTGGGTTGCCGAAATCAGGTGTaGAGCTGGGCCAGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: AGSLPELSTVISSAEAVGCRNQV*SWARAG
Trigger: GCCTGCCCTGGCCCAGCTCAACACCTGATTTCGGCA...ACCCACTGCTTCGGCGGATGAGATGACCGTGCTCAGCTCAGGGAGAGACCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR CAA 90 bp CTGAGCACGGTCATCTCATCCGCCGAAGCAGTGGGTGGTGGGGTGTGCCAGGGAGGGCTGGGTGCCTCATaGGGGTCACCTGCCTCATCA +
Preference number: 5 (lower is better)
Translates to: LSTVISSAEAVGGGVCQGGLGAS*GSPASS
Trigger: TGATGAGGCAGGTGACCCCAATGAGGCACCCAGCCC...TCCCTGGCACACCCCACCACCCACTGCTTCGGCGGATGAGATGACCGTGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp GGGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCGTCCAAACTCTTCTCTaGGGGGCTCCCATAGGGGTA +
Preference number: 5 (lower is better)
Translates to: GSPSPGAGHEESRSSLWSVQTLL*GAPIGV
Trigger: TACCCCTATGGGAGCCCCCAAGAGAAGAGTTTGGAC...GGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp GCGGGGTCTCTCCCTGAGCTGAGCACGGTCATCTCATCCGCCGAAGCAGTGGGTGCTGAGGTTGGCACTTaGGCAGGGGTACGGGGTACC +
Preference number: 5 (lower is better)
Translates to: AGSLPELSTVISSAEAVGAEVGT*AGVRGT
Trigger: GGTACCCCGTACCCCTGCCAAAGTGCCAACCTCAGC...ACCCACTGCTTCGGCGGATGAGATGACCGTGCTCAGCTCAGGGAGAGACCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp GGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCCTTCCCTTTGTCAGGCTaGGGGGACTCCTTGGTGACT +
Preference number: 5 (lower is better)
Translates to: GPRLRGLGMKRAGPVCGPFPLSG*GDSLVT
Trigger: AGTCACCAAGGAGTCCCCCAAGCCTGACAAAGGGAA...GGGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp AGTAGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGCTGGTGTTGCGGTGCTaGACCTCGGCGCCAGGGGCT +
Preference number: 5 (lower is better)
Translates to: SRDWRAATQWPLTPSPFQLVLRC*TSAPGA
Trigger: AGCCCCTGGCGCCGAGGTCAAGCACCGCAACACCAG...CTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCTACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp GCCACTCTGCCTTCCTCGGCCATGTCCGAAGTGCTGGGGGTGCGGCTACCCCCGTTCAGCGCTGGCAGCTaGCTCTTCTTAAGGCCGAAC +
Preference number: 5 (lower is better)
Translates to: ATLPSSAMSEVLGVRLPPFSAGS*LFLRPN
Trigger: GTTCGGCCTTAAGAAGAGCAAGCTGCCAGCGCTGAA...CGGGGGTAGCCGCACCCCCAGCACTTCGGACATGGCCGAGGAAGGCAGAGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CAA 90 bp GCGGGGTCTCTCCCTGAGCTGAGCACGGTCATCTCATCCGCCGAAGCAGTGGGTTTCCGGGCTTCCATCTaGACTTCCCTCCGGAGCGGG +
Preference number: 5 (lower is better)
Translates to: AGSLPELSTVISSAEAVGFRASI*TSLRSG
Trigger: CCCGCTCCGGAGGGAAGTCAAGATGGAAGCCCGGAA...ACCCACTGCTTCGGCGGATGAGATGACCGTGCTCAGCTCAGGGAGAGACCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp AGTAGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGCTGGCCAGGGGCTCTaGGGGTCAGAAGACACCGGC +
Preference number: 5 (lower is better)
Translates to: SRDWRAATQWPLTPSPFQAGQGL*GSEDTG
Trigger: GCCGGTGTCTTCTGACCCCAAGAGCCCCTGGCCAGC...CTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCTACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp GACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGGGGCAGCCCCTCCAGTaGTCGGGGTGGGCACATGAG +
Preference number: 5 (lower is better)
Translates to: DWRAATQWPLTPSPFQEEGQPLQ*SGWAHE
Trigger: CTCATGTGCCCACCCCGACAACTGGAGGGGCTGCCC...CTCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS GCA 90 bp CAGTTGTCGGGGTGGGCACATGAGAGGGTCCGAGGAGCTGCCGGCTaGCCTAGTATTGGGGAAGGTCCAGTTCTTGGCCAGCTGGACAGG +
Preference number: 5 (lower is better)
Translates to: QLSGWAHERVRGAAG*PSIGEGPVLGQLDR
Trigger: CCTGTCCAGCTGGCCAAGAACTGGACCTTCCCCAATACTAGGGCAGCCGGCAGCTCCTCGGACCCTCTCATGTGCCCACCCCGACAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CCA 90 bp TGGCTGGGCTTCTTGGATGAGTTGCCTGGGGTCCTGCGGCCGGGATaGGGAGACTCCGAGCCTGCCTTGTCCAAACTCTTCTCTTGGGGG +
Preference number: 5 (lower is better)
Translates to: WLGFLDELPGVLRPG*GDSEPALSKLFSWG
Trigger: CCCCCAAGAGAAGAGTTTGGACAAGGCAGGCTCGGAGTCTCCCCATCCCGGCCGCAGGACCCCAGGCAACTCATCCAAGAAGCCCAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CCA 90 bp GACTTGGGTCAGTGGGGCCAGGTACTAGGGGTGTGGACTGGGCCGTaGTACTACCACAGTCTGCCCAGGGAGGGCCCTTCCCTTTGTCAG +
Preference number: 5 (lower is better)
Translates to: DLGQWGQVLGVWTGP*YYHSLPREGPSLCQ
Trigger: CTGACAAAGGGAAGGGCCCTCCCTGGGCAGACTGTGGTAGTACCACGGCCCAGTCCACACCCCTAGTACCTGGCCCCACTGACCCAAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CCA 90 bp GCCGCAGCACGTTCTCCTCAATGCCCTTCATCACCTTCTCCTCGATaGCTGAGTGTGGGGCCAGCCCCTCAGGGCCCTGACTTGGGTCAG +
Preference number: 5 (lower is better)
Translates to: AAARSPQCPSSPSPR*LSVGPAPQGPDLGQ
Trigger: CTGACCCAAGTCAGGGCCCTGAGGGGCTGGCCCCACACTCAGCCATCGAGGAGAAGGTGATGAAGGGCATTGAGGAGAACGTGCTGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CCA 90 bp GGACGCGAGCTAAGTCTGCCCGGCCGGCGCGCGCCGCTTCCGCTTTaGTGGGAAGGACCTCCCTTCCCCCTTATAGAAACACTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: GRELSLPGRRAPLPL*WEGPPFPLIETLSP
Trigger: TGGAGAAAGTGTTTCTATAAGGGGGAAGGGAGGTCCTTCCCACCAAAGCGGAAGCGGCGCGCGCCGGCCGGGCAGACTTAGCTCGCGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480927.1
CDS-3UTR CAA 90 bp AGTAGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGCCACACAGCTCGCCGTaGATGGGCTCTGGGGAGCCA +
Preference number: 5 (lower is better)
Translates to: SRDWRAATQWPLTPSPFQPHSSP*MGSGEP
Trigger: TGGCTCCCCAGAGCCCATCAACGGCGAGCTGTGTGG...CTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCTACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR CAA 90 bp GGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGATGCCTGGGGCACAGTTaGGGCCAGAGCTGGTGCCCT +
Preference number: 5 (lower is better)
Translates to: GLEGCDTVAFNPQSLPGRCLGHS*GQSWCP
Trigger: AGGGCACCAGCTCTGGCCCAAACTGTGCCCCAGGCA...TCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR CAA 90 bp GGTCCCCGTCTCCGGGGGCTGGGCATGAAGAGAGCCGGTCCAGTCTGTGGTCCCGGCTCTTCTCCGAGGTaGGAGGCAGCTTTAGAAACT +
Preference number: 5 (lower is better)
Translates to: GPRLRGLGMKRAGPVCGPGSSPR*EAALET
Trigger: AGTTTCTAAAGCTGCCTCCAACCTCGGAGAAGAGCC...GGGACCACAGACTGGACCGGCTCTCTTCATGCCCAGCCCCCGGAGACGGGGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp CACCACAAGATGGCTCAGCCTGAAGTAGGGACTGGAGGGCTGCGACACAGTGGCCCTGCCAGCCGGCTCTaGGCCAGCTCCACTTTGGTG +
Preference number: 5 (lower is better)
Translates to: HHKMAQPEVGTGGLRHSGPASRL*ASSTLV
Trigger: CACCAAAGTGGAGCTGGCCAAGAGCCGGCTGGCAGG...GCCACTGTGTCGCAGCCCTCCAGTCCCTACTTCAGGCTGAGCCATCTTGTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp CAGTCCCTTCCAGGAAGAGCCTTACTCTGGGTGAGAGAAGGGACCAAGGGCGGGGGAGGGCCCTTCCCTTaGTCAGGCTTGGGGGACTCC +
Preference number: 5 (lower is better)
Translates to: QSLPGRALLWVREGTKGGGGPFP*SGLGDS
Trigger: GGAGTCCCCCAAGCCTGACAAAGGGAAGGGCCCTCC...CCCGCCCTTGGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCCTGGAAGGGACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp TTCTTATCCACCTGCCTCCTTGGTCCCTTCAGGGAGGGGTCCCCGTCTCCGGGGCGCAGGTCTTCCGCCTaGGCCATCAGCTTGGAGATG +
Preference number: 5 (lower is better)
Translates to: FLSTCLLGPFREGSPSPGRRSSA*AISLEM
Trigger: CATCTCCAAGCTGATGGCCAAGGCGGAAGACCTGCG...CCCCGGAGACGGGGACCCCTCCCTGAAGGGACCAAGGAGGCAGGTGGATAAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp AGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAATCCCCGTACTCAGGCTaGGGCTCCCGCCAGCTCTTG +
Preference number: 5 (lower is better)
Translates to: RDWRAATQWPLTPSPFQESPYSG*GSRQLL
Trigger: CAAGAGCTGGCGGGAGCCCAAGCCTGAGTACGGGGA...TTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp AGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGCCTTACGCTGGCCAGGGGCTCTaGGGGTCAGAAGACACCGGC +
Preference number: 5 (lower is better)
Translates to: RAATQWPLTPSPFQEEPYAGQGL*GSEDTG
Trigger: GCCGGTGTCTTCTGACCCCAAGAGCCCCTGGCCAGC...GTAAGGCTCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS GCA 90 bp GAGGCACCACCTTGGTTGGTGACTTGGAAGGGAGCTTGGTGGGGCTaGTGTGAGGGCTCTTATTGGGCTTGCCCAGGCTTGGGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: EAPPWLVTWKGAWWG*CEGSYWACPGLGLR
Trigger: CCTCAGCCCCAAGCCTGGGCAAGCCCAATAAGAGCCCTCACAGCAGCCCCACCAAGCTCCCTTCCAAGTCACCAACCAAGGTGGTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CCA 90 bp CAGGTCGAGGCACCACCTTGGTTGGTGACTTGGAAGGGAGCTTGGTaGGGCTGCTGTGAGGGCTCTTATTGGGCTTGCCCAGGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: QVEAPPWLVTWKGAW*GCCEGSYWACPGLG
Trigger: CCCCAAGCCTGGGCAAGCCCAATAAGAGCCCTCACAGCAGCCCCACCAAGCTCCCTTCCAAGTCACCAACCAAGGTGGTGCCTCGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CCA 90 bp AGCCCCCTCCTTGTTCTTGGTGGCCTCTGTGCGGCGGTTCAGCGCTaGCAGCTTGCTCTTCTTAAGGCCGAACCAGCTGGCGATGCTGCT +
Preference number: 5 (lower is better)
Translates to: SPLLVLGGLCAAVQR*QLALLKAEPAGDAA
Trigger: AGCAGCATCGCCAGCTGGTTCGGCCTTAAGAAGAGCAAGCTGCCAGCGCTGAACCGCCGCACAGAGGCCACCAAGAACAAGGAGGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CCA 90 bp CCGGCTGGAAATCCCCGTACTCAGGCTTGGGCTCCCGCCAGCTCTTaGATGGCAGCTCCTTGCCATCCACCCTGTTTAGCAGCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: PAGNPRTQAWAPASS*MAAPCHPPCLAAAA
Trigger: TGCAGCAGCTGCTAAACAGGGTGGATGGCAAGGAGCTGCCATCCAAGAGCTGGCGGGAGCCCAAGCCTGAGTACGGGGATTTCCAGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CCA 90 bp TCTTGGGGTCAGAAGACACCGGCTGGAAATCCCCGTACTCAGGCTTaGGCTCCCGCCAGCTCTTGGATGGCAGCTCCTTGCCATCCACCC +
Preference number: 5 (lower is better)
Translates to: SWGQKTPAGNPRTQA*APASSWMAAPCHPP
Trigger: GGGTGGATGGCAAGGAGCTGCCATCCAAGAGCTGGCGGGAGCCCAAGCCTGAGTACGGGGATTTCCAGCCGGTGTCTTCTGACCCCAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp AGTAGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGGGCTGGGTGCCTCATaGGGGTCACCTGCCTCATCA +
Preference number: 5 (lower is better)
Translates to: SRDWRAATQWPLTPSPFQGLGAS*GSPASS
Trigger: TGATGAGGCAGGTGACCCCAATGAGGCACCCAGCCC...CTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp TTTAACCCCCAGTCCCTTCCAGGAAGAGCCTTACTCTGGGTGAGAGAAGGGACCCCTGGGTGGTCCCCATaGAGTGGGCCTGCAGCCCCG +
Preference number: 5 (lower is better)
Translates to: FNPQSLPGRALLWVREGTPGWSP*SGPAAP
Trigger: CGGGGCTGCAGGCCCACTCAATGGGGACCACCCAGG...GGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCCTGGAAGGGACTGGGGGTTAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp CTGAGCACGGTCATCTCATCCGCCGAAGCAGTGGGTGGTGGGGTGTGCCAGGGAGACTTGGGGAGGCCTTaGGACTTAGACAGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: LSTVISSAEAVGGGVCQGDLGRP*DLDSCG
Trigger: CCCACAGCTGTCTAAGTCCAAAGGCCTCCCCAAGTC...TCCCTGGCACACCCCACCACCCACTGCTTCGGCGGATGAGATGACCGTGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp AGTAGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGCCCTGGCTGGGCTTCTaGGATGAGTTGCCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: SRDWRAATQWPLTPSPFQPWLGF*DELPGV
Trigger: GACCCCAGGCAACTCATCCAAGAAGCCCAGCCAGGG...CTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp AGTAGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGCTGAGGTTGGCACTTaGGCAGGGGTACGGGGTACC +
Preference number: 5 (lower is better)
Translates to: SRDWRAATQWPLTPSPFQAEVGT*AGVRGT
Trigger: GGTACCCCGTACCCCTGCCAAAGTGCCAACCTCAGC...CTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp GACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGGGCTTGGGGCTGAGGTaGGCACTTTGGCAGGGGTAC +
Preference number: 5 (lower is better)
Translates to: DWRAATQWPLTPSPFQEEGLGLR*ALWQGY
Trigger: GTACCCCTGCCAAAGTGCCAACCTCAGCCCCAAGCC...CTCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp AGTAGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGTTCCGGGCTTCCATCTaGACTTCCCTCCGGAGCGGG +
Preference number: 5 (lower is better)
Translates to: SRDWRAATQWPLTPSPFQFRASI*TSLRSG
Trigger: CCCGCTCCGGAGGGAAGTCAAGATGGAAGCCCGGAA...CTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CCA 90 bp CAACCTCGTCCAGACAGCGCTCATAAGTCTCCCGCTGGTTTTCGTTaGCCTGGGCAAGTGCCGAGTTCTCTGCCTCCAGCTCCCGCAGTC +
Preference number: 5 (lower is better)
Translates to: QPRPDSAHKSPAGFR*PGQVPSSLPPAPAV
Trigger: GACTGCGGGAGCTGGAGGCAGAGAACTCGGCACTTGCCCAGGCCAACGAAAACCAGCGGGAGACTTATGAGCGCTGTCTGGACGAGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000477361.1
CDS CCA 90 bp AGCAAGGGGTCAGTCTCTTCCAGGGCTCTCAGCACCTCCAGAATCTaGGCCTTCTTCCGAAGGAACGGGGATAGGGCATCCAGCGCTGGG +
Preference number: 5 (lower is better)
Translates to: SKGSVSSRALSTSRI*AFFRRNGDRASSAG
Trigger: CCCAGCGCTGGATGCCCTATCCCCGTTCCTTCGGAAGAAGGCCCAGATTCTGGAGGTGCTGAGAGCCCTGGAAGAGACTGACCCCTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS CCA 90 bp AGACCTCGTCCAGACAGCGCTCATAAGTCTCCCGCTGGTTTTCGTTaGCCTGGGCAAGTGCCGAGTTCTCTGCCTCCAGCTCCCGCAGTC +
Preference number: 5 (lower is better)
Translates to: RPRPDSAHKSPAGFR*PGQVPSSLPPAPAV
Trigger: GACTGCGGGAGCTGGAGGCAGAGAACTCGGCACTTGCCCAGGCCAACGAAAACCAGCGGGAGACTTATGAGCGCTGTCTGGACGAGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491441.1
CDS-3UTR CAA 90 bp CAGTCCCTTCCAGGAAGAGCCTTACTCTGGGTGAGAGAAGGGACCAAGGGCGGGGTGTGGAGTCTGGGGTaGTGTAGCAGGGTGAAGGGC +
Preference number: 5 (lower is better)
Translates to: QSLPGRALLWVREGTKGGVWSLG*CSRVKG
Trigger: GCCCTTCACCCTGCTACACAACCCCAGACTCCACAC...CCCGCCCTTGGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCCTGGAAGGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp CACCACAAGATGGCTCAGCCTGAAGTAGGGACTGGAGGGCTGCGACACAGTGGCGGTCGAGGCACCACCTaGGTTGGTGACTTGGAAGGG +
Preference number: 5 (lower is better)
Translates to: HHKMAQPEVGTGGLRHSGGRGTT*VGDLEG
Trigger: CCCTTCCAAGTCACCAACCAAGGTGGTGCCTCGACC...GCCACTGTGTCGCAGCCCTCCAGTCCCTACTTCAGGCTGAGCCATCTTGTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp CTGCTCCAGAGGGGGCCCAAGGTGGGGTATACTTCAGAGGAAACAGGCTGGAGGGGTCGAGGCACCACCTaGGTTGGTGACTTGGAAGGG +
Preference number: 5 (lower is better)
Translates to: LLQRGPKVGYTSEETGWRGRGTT*VGDLEG
Trigger: CCCTTCCAAGTCACCAACCAAGGTGGTGCCTCGACC...CCTCCAGCCTGTTTCCTCTGAAGTATACCCCACCTTGGGCCCCCTCTGGAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CAA 90 bp TTTAACCCCCAGTCCCTTCCAGGAAGAGCCTTACTCTGGGTGAGAGAAGGGACCCTGGTGTTGCGGTGCTaGACCTCGGCGCCAGGGGCT +
Preference number: 5 (lower is better)
Translates to: FNPQSLPGRALLWVREGTLVLRC*TSAPGA
Trigger: AGCCCCTGGCGCCGAGGTCAAGCACCGCAACACCAG...GGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCCTGGAAGGGACTGGGGGTTAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CCA 90 bp CTCACCTTCTGGTTCAGCAACGCCTGTACCACATGGTTGGCAACCTaGGGACAGAAAGCCCCGAGGCAGAGCCATCAGCTGACCCCAGCT +
Preference number: 5 (lower is better)
Translates to: LTFWFSNACTTWLAT*GQKAPRQSHQLTPA
Trigger: AGCTGGGGTCAGCTGATGGCTCTGCCTCGGGGCTTTCTGTCCCCAGGTTGCCAACCATGTGGTACAGGCGTTGCTGAACCAGAAGGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491441.1
CDS-3UTR CAA 90 bp AGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAATTGGCCAGCTCCACTTaGGTGAGGCAGCTCCTTGGT +
Preference number: 5 (lower is better)
Translates to: RDWRAATQWPLTPSPFQELASST*VRQLLG
Trigger: ACCAAGGAGCTGCCTCACCAAAGTGGAGCTGGCCAA...TTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp GGGGGCCTCCACATTTTATTAGGGATACGGCAGAAGCAGAGGCAGGAAGCAGAGCCTGCCAGCCGGCTCTaGGCCAGCTCCACTTTGGTG +
Preference number: 5 (lower is better)
Translates to: GGLHILLGIRQKQRQEAEPASRL*ASSTLV
Trigger: CACCAAAGTGGAGCTGGCCAAGAGCCGGCTGGCAGG...CTCTGCTTCCTGCCTCTGCTTCTGCCGTATCCCTAATAAAATGTGGAGGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp CACCACAAGATGGCTCAGCCTGAAGTAGGGACTGGAGGGCTGCGACACAGTGGCACCTTGGTTGGTGACTaGGAAGGGAGCTTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: HHKMAQPEVGTGGLRHSGTLVGD*EGSLVG
Trigger: CCCCACCAAGCTCCCTTCCAAGTCACCAACCAAGGT...GCCACTGTGTCGCAGCCCTCCAGTCCCTACTTCAGGCTGAGCCATCTTGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp GACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGGAGGCACCACCTTGGTaGGTGACTTGGAAGGGAGCT +
Preference number: 5 (lower is better)
Translates to: DWRAATQWPLTPSPFQEEEAPPW*VTWKGA
Trigger: AGCTCCCTTCCAAGTCACCAACCAAGGTGGTGCCTC...CTCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp GGGGGCCTCCACATTTTATTAGGGATACGGCAGAAGCAGAGGCAGGAAGCAGAGGGAGGGCCCTTCCCTTaGTCAGGCTTGGGGGACTCC +
Preference number: 5 (lower is better)
Translates to: GGLHILLGIRQKQRQEAEGGPFP*SGLGDS
Trigger: GGAGTCCCCCAAGCCTGACAAAGGGAAGGGCCCTCC...CTCTGCTTCCTGCCTCTGCTTCTGCCGTATCCCTAATAAAATGTGGAGGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp GACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGGAAGGTGTCTGCACCTaGGTACATGCCAGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: DWRAATQWPLTPSPFQEEEGVCT*VHASQL
Trigger: CAGCTGGCTGGCATGTACCAAGGTGCAGACACCTTC...CTCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp AGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAAGGTGTCTGCACCTaGGTACATGCCAGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: RDWRAATQWPLTPSPFQEEGVCT*VHASQL
Trigger: CAGCTGGCTGGCATGTACCAAGGTGCAGACACCTTC...TTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp CAGTCCCTTCCAGGAAGAGCCTTACTCTGGGTGAGAGAAGGGACCAAGGGCGGGCCGGCTGCCCTAGTATaGGGGAAGGTCCAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: QSLPGRALLWVREGTKGGPAALV*GKVQFL
Trigger: CAAGAACTGGACCTTCCCCAATACTAGGGCAGCCGG...CCCGCCCTTGGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCCTGGAAGGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS TCA 90 bp AAGAGCACCCTGAGAACACGACTCAGCACATGGGGAGAATACAGTTaGGCCTGGGGCCTGGCGCCCTTAGCTCTAGCTCTGGCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: KSTLRTRLSTWGEYS*AWGLAPLALALAPV
Trigger: CACTGGAGCCAGAGCTAGAGCTAAGGGCGCCAGGCCCCAGGCTCAACTGTATTCTCCCCATGTGCTGAGTCGTGTTCTCAGGGTGCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477361.1
ENST00000491441.1
CDS GCA 90 bp CCAGCTCCTCCCTATTCATCCTTCAGGGCTCCCAGGCGATGCTCCTaGAAGATTGTACACCAGCCTCCCCCACCAGACAGTCAACTCCGT +
Preference number: 5 (lower is better)
Translates to: PAPPYSSFRAPRRCS*KIVHQPPPPDSQLR
Trigger: ACGGAGTTGACTGTCTGGTGGGGGAGGCTGGTGTACAATCTTGCAGGAGCATCGCCTGGGAGCCCTGAAGGATGAATAGGGAGGAGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000477361.1
ENST00000491441.1
CDS-3UTR CAA 90 bp CACCACAAGATGGCTCAGCCTGAAGTAGGGACTGGAGGGCTGCGACACAGTGGCGTCCAAACTCTTCTCTaGGGGGCTCCCATAGGGGTA +
Preference number: 5 (lower is better)
Translates to: HHKMAQPEVGTGGLRHSGVQTLL*GAPIGV
Trigger: TACCCCTATGGGAGCCCCCAAGAGAAGAGTTTGGAC...GCCACTGTGTCGCAGCCCTCCAGTCCCTACTTCAGGCTGAGCCATCTTGTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp CAGTCCCTTCCAGGAAGAGCCTTACTCTGGGTGAGAGAAGGGACCAAGGGCGGGTCCAGCCGCGGTGGCTaGGTCTTAGGAAGATTCTTG +
Preference number: 5 (lower is better)
Translates to: QSLPGRALLWVREGTKGGSSRGG*VLGRFL
Trigger: CAAGAATCTTCCTAAGACCAAGCCACCGCGGCTGGA...CCCGCCCTTGGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCCTGGAAGGGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp AGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGGAAGAGCCTTACCCGGCTGCCCTAGTATaGGGGAAGGTCCAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: RAATQWPLTPSPFQEEPYPAALV*GKVQFL
Trigger: CAAGAACTGGACCTTCCCCAATACTAGGGCAGCCGG...GTAAGGCTCTTCCTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS GCA 90 bp ACTTGGCCAGCTCCTCCCTATTCATCCTTCAGGGCTCCCAGGCGATaGTCCTGCAAGATTGTACACCAGCCTCCCCCACCAGACAGTCAA +
Preference number: 5 (lower is better)
Translates to: TWPAPPYSSFRAPRR*SCKIVHQPPPPDSQ
Trigger: TTGACTGTCTGGTGGGGGAGGCTGGTGTACAATCTTGCAGGAGCATCGCCTGGGAGCCCTGAAGGATGAATAGGGAGGAGCTGGCCAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000477361.1
ENST00000491441.1
CDS CCA 90 bp GTAGAACAGAATGGACCCGCCCAAGGCGGAAAGACGGGGAATCACTaGAGGGCAACAGCCCATGTCCTCCAAGCCCTTAGTCTCCAGGAA +
Preference number: 5 (lower is better)
Translates to: VEQNGPAQGGKTGNH*RATAHVLQALSLQE
Trigger: TTCCTGGAGACTAAGGGCTTGGAGGACATGGGCTGTTGCCCTCCAGTGATTCCCCGTCTTTCCGCCTTGGGCGGGTCCATTCTGTTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477361.1
ENST00000491441.1
CDS CCA 90 bp ACCTGGCCTTACCTAGTCCCACCTCTGTCTCTAGGTAGAACAGAATaGACCCGCCCAAGGCGGAAAGACGGGGAATCACTGGAGGGCAAC +
Preference number: 5 (lower is better)
Translates to: TWPYLVPPLSLGRTE*TRPRRKDGESLEGN
Trigger: GTTGCCCTCCAGTGATTCCCCGTCTTTCCGCCTTGGGCGGGTCCATTCTGTTCTACCTAGAGACAGAGGTGGGACTAGGTAAGGCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477361.1
ENST00000491441.1
CDS CCA 90 bp GTGTCTGGGTTACTCACCTTCTGGTTCAGCAACGCCTGTACCACATaGTTGGCAACCTGGGGACAGAAAGCCCCGAGGCAGAGCCATCAG +
Preference number: 5 (lower is better)
Translates to: VSGLLTFWFSNACTT*LATWGQKAPRQSHQ
Trigger: CTGATGGCTCTGCCTCGGGGCTTTCTGTCCCCAGGTTGCCAACCATGTGGTACAGGCGTTGCTGAACCAGAAGGTGAGTAACCCAGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491441.1
CDS-3UTR CAA 90 bp AGTAGGGACTGGAGGGCTGCGACACAGTGGCCTTTAACCCCCAGTCCCTTCCAGACTCTCTTCTTCAGCTaGATGCACTCCTCTCGCAGG +
Preference number: 5 (lower is better)
Translates to: SRDWRAATQWPLTPSPFQTLFFS*MHSSRR
Trigger: CCTGCGAGAGGAGTGCATCAAGCTGAAGAAGAGAGT...CTGGAAGGGACTGGGGGTTAAAGGCCACTGTGTCGCAGCCCTCCAGTCCCTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR CAA 90 bp CACCACAAGATGGCTCAGCCTGAAGTAGGGACTGGAGGGCTGCGACACAGTGGCGGCAGCTTTAGAAACTaGAGACCCCTAGCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: HHKMAQPEVGTGGLRHSGGSFRN*RPLAGE
Trigger: CTCTCCAGCTAGGGGTCTCAAGTTTCTAAAGCTGCC...GCCACTGTGTCGCAGCCCTCCAGTCCCTACTTCAGGCTGAGCCATCTTGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp CTGCTCCAGAGGGGGCCCAAGGTGGGGTATACTTCAGAGGAAACAGGCTGGAGGGTCTTAGGAAGATTCTaGCTGGGGGTCCCACTGCTA +
Preference number: 5 (lower is better)
Translates to: LLQRGPKVGYTSEETGWRVLGRF*LGVPLL
Trigger: TAGCAGTGGGACCCCCAGCAAGAATCTTCCTAAGAC...CCTCCAGCCTGTTTCCTCTGAAGTATACCCCACCTTGGGCCCCCTCTGGAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS TCA 90 bp CAGATCAGGCTCTTTGTGCACGATGGTCCTTCTGCTGGGGTCTCTTaGCACCACCCGCTCCTTTCGACTTGGCCAGCTCCTCCCTATTCA +
Preference number: 5 (lower is better)
Translates to: QIRLFVHDGPSAGVS*HHPLLSTWPAPPYS
Trigger: TGAATAGGGAGGAGCTGGCCAAGTCGAAAGGAGCGGGTGGTGTCAAGAGACCCCAGCAGAAGGACCATCGTGCACAAAGAGCCTGATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477361.1
ENST00000491441.1
CDS-3UTR CAA 90 bp TTTAACCCCCAGTCCCTTCCAGGAAGAGCCTTACTCTGGGTGAGAGAAGGGACCGCCTGTACCACATGGTaGGCAACCTCGTCCAGACAG +
Preference number: 5 (lower is better)
Translates to: FNPQSLPGRALLWVREGTACTTW*ATSSRQ
Trigger: CTGTCTGGACGAGGTTGCCAACCATGTGGTACAGGC...GGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCCTGGAAGGGACTGGGGGTTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS-3UTR CAA 90 bp GGGGGCCTCCACATTTTATTAGGGATACGGCAGAAGCAGAGGCAGGAAGCAGAGTTGGCCAGCTCCACTTaGGTGAGGCAGCTCCTTGGT +
Preference number: 5 (lower is better)
Translates to: GGLHILLGIRQKQRQEAELASST*VRQLLG
Trigger: ACCAAGGAGCTGCCTCACCAAAGTGGAGCTGGCCAA...CTCTGCTTCCTGCCTCTGCTTCTGCCGTATCCCTAATAAAATGTGGAGGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS TCA 90 bp GATCCCTGGCATGTAGGAGACAGACTGATGACTAGACGAAGCTCATaGCCACATCCAGCACGGCCAGGGCTCAGACCTGCATCACACCAT +
Preference number: 5 (lower is better)
Translates to: DPWHVGDRLMTRRSS*PHPARPGLRPASHH
Trigger: ATGGTGTGATGCAGGTCTGAGCCCTGGCCGTGCTGGATGTGGTCATGAGCTTCGTCTAGTCATCAGTCTGTCTCCTACATGCCAGGGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477361.1
ENST00000491441.1
CDS GCA 90 bp GCCGTACCTTACTGGAGAAACTGGTCTCCCCACATCACTCCCTCCTaGTCCCGAGTCCTTTCCCTTTCCTCTGCTGCAATTCTCACCATG +
Preference number: 5 (lower is better)
Translates to: AVPYWRNWSPHITPS*SRVLSLSSAAILTM
Trigger: CATGGTGAGAATTGCAGCAGAGGAAAGGGAAAGGACTCGGGAGCAGGAGGGAGTGATGTGGGGAGACCAGTTTCTCCAGTAAGGTACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS-3UTR CAA 90 bp TTTAACCCCCAGTCCCTTCCAGGAAGAGCCTTACTCTGGGTGAGAGAAGGGACCTTCCCTTTGTCAGGCTaGGGGGACTCCTTGGTGACT +
Preference number: 5 (lower is better)
Translates to: FNPQSLPGRALLWVREGTFPLSG*GDSLVT
Trigger: AGTCACCAAGGAGTCCCCCAAGCCTGACAAAGGGAA...GGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCCTGGAAGGGACTGGGGGTTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS-3UTR CAA 90 bp TTTAACCCCCAGTCCCTTCCAGGAAGAGCCTTACTCTGGGTGAGAGAAGGGACCGTCTTAGGAAGATTCTaGCTGGGGGTCCCACTGCTA +
Preference number: 5 (lower is better)
Translates to: FNPQSLPGRALLWVREGTVLGRF*LGVPLL
Trigger: TAGCAGTGGGACCCCCAGCAAGAATCTTCCTAAGAC...GGTCCCTTCTCTCACCCAGAGTAAGGCTCTTCCTGGAAGGGACTGGGGGTTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CCA 90 bp ACTCACACAAGAAACCTGATTTCTCTACTGGGACTGGCCTCAAGCTaGCACGTCATTCAGCCTCCCTGGGTCTCAGTCCCTCTATTTGTA +
Preference number: 5 (lower is better)
Translates to: THTRNLISLLGLASS*HVIQPPWVSVPLFV
Trigger: TACAAATAGAGGGACTGAGACCCAGGGAGGCTGAATGACGTGCCAGCTTGAGGCCAGTCCCAGTAGAGAAATCAGGTTTCTTGTGTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477361.1
ENST00000491441.1
CDS CCA 90 bp GTGGAGGTTTCCAGTAGATGGGCAACCCTTCCTATTATAAAAGGGTaGAAGCTTGGTCCATCACTGACTACCCCTTGTGCCATTGAAGCC +
Preference number: 5 (lower is better)
Translates to: VEVSSRWATLPIIKG*KLGPSLTTPCAIEA
Trigger: GGCTTCAATGGCACAAGGGGTAGTCAGTGATGGACCAAGCTTCCACCCTTTTATAATAGGAAGGGTTGCCCATCTACTGGAAACCTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477361.1
CDS CCA 90 bp AAGGGAAGAAGTCATGCTCAAATCAGTGACCACTGCTCAGAGACCTaGCCTTACCTAGTCCCACCTCTGTCTCTAGGTAGAACAGAATGG +
Preference number: 5 (lower is better)
Translates to: KGRSHAQISDHCSET*PYLVPPLSLGRTEW
Trigger: CCATTCTGTTCTACCTAGAGACAGAGGTGGGACTAGGTAAGGCCAGGTCTCTGAGCAGTGGTCACTGATTTGAGCATGACTTCTTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477361.1
ENST00000491441.1
CDS TCA 90 bp AGAAGAATTCTTCCTCCCTTACAGGGTCATTGTGAGAGTCAAATGTaGCCACGTAGGGAAGAGCACCCTGAGAACACGACTCAGCACATG +
Preference number: 5 (lower is better)
Translates to: RRILPPLQGHCESQM*PRREEHPENTTQHM
Trigger: CATGTGCTGAGTCGTGTTCTCAGGGTGCTCTTCCCTACGTGGTCACATTTGACTCTCACAATGACCCTGTAAGGGAGGAAGAATTCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477361.1
ENST00000491441.1
CDS TCA 90 bp ACAGAGACCATTGTTTTAGAAAGCCCCATACTCACACAAGAAACCTaGTTTCTCTACTGGGACTGGCCTCAAGCTGGCACGTCATTCAGC +
Preference number: 5 (lower is better)
Translates to: TETIVLESPILTQET*FLYWDWPQAGTSFS
Trigger: GCTGAATGACGTGCCAGCTTGAGGCCAGTCCCAGTAGAGAAATCAGGTTTCTTGTGTGAGTATGGGGCTTTCTAAAACAATGGTCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477361.1
ENST00000491441.1
CDS TCA 90 bp ATCCTCCCACCCCACCAAACCATTGCCATTGTTGCTAGCTTGAACTaGCTAGTCTTCATCTTCCAATTGAGTTCCAATTTCTCTGCTAGA +
Preference number: 5 (lower is better)
Translates to: ILPPHQTIAIVASLN*LVFIFQLSSNFSAR
Trigger: TCTAGCAGAGAAATTGGAACTCAATTGGAAGATGAAGACTAGTCAGTTCAAGCTAGCAACAATGGCAATGGTTTGGTGGGGTGGGAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477361.1
CDS TCA 90 bp TTGGAGTTAAAGTGGCCCCAATGTCAAGAAGTTATCCACCATAGGTaGGTAAATATTCAGATGCCATTTAGGCTCACAACATCAACACTG +
Preference number: 5 (lower is better)
Translates to: LELKWPQCQEVIHHR*VNIQMPFRLTTSTL
Trigger: CAGTGTTGATGTTGTGAGCCTAAATGGCATCTGAATATTTACTCACCTATGGTGGATAACTTCTTGACATTGGGGCCACTTTAACTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477361.1
CDS CCA 90 bp ATGCTGTTTTTCTTTCATACAAATATTGTGGAGGTTTCCAGTAGATaGGCAACCCTTCCTATTATAAAAGGGTGGAAGCTTGGTCCATCA +
Preference number: 5 (lower is better)
Translates to: MLFFFHTNIVEVSSR*ATLPIIKGWKLGPS
Trigger: TGATGGACCAAGCTTCCACCCTTTTATAATAGGAAGGGTTGCCCATCTACTGGAAACCTCCACAATATTTGTATGAAAGAAAAACAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477361.1
CDS CCA 72 bp GGGCCCTGGGGCGTAGGGGACGGGCGGCTGGGCTCCTaGCTTCGCTTCCGGTCCACGGGCAGGGCCATGGGG +
Preference number: 6 (lower is better)
Translates to: GPWGVGDGRLGS*LRFRSTGRAMG
Trigger: CCCCATGGCCCTGCCCGTGGACCGGAAGCGAAGCCAGGAGCCCAGCCGCCCGTCCCCTACGCCCCAGGGCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS GCA 72 bp CTGGGGCTGGGCCACCAGGCCGTGGCCGGGCCCGGCTaGTTAGGTAGGCCTTCTCCTCTTCCAGTGCCCGAC +
Preference number: 6 (lower is better)
Translates to: LGLGHQAVAGPG*LGRPSPLPVPD
Trigger: GTCGGGCACTGGAAGAGGAGAAGGCCTACCTAAGCAGCCGGGCCCGGCCACGGCCTGGTGGCCCAGCCCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS GCA 72 bp AGGCCGAACCAGCTGGCGATGCTGCTGGTGTTGCGGTaGTTGACCTCGGCGCCAGGGGCTCGCTCCTGGCCC +
Preference number: 6 (lower is better)
Translates to: RPNQLAMLLVLR*LTSAPGARSWP
Trigger: GGGCCAGGAGCGAGCCCCTGGCGCCGAGGTCAAGCACCGCAACACCAGCAGCATCGCCAGCTGGTTCGGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS GCA 72 bp TGCTGGGGTGCCGCCCACTCACCAGCAGCTCCTCTATaGCTGGCACCTCCCGCTCCAGTGTGTGGGCGCGGC +
Preference number: 6 (lower is better)
Translates to: CWGAAHSPAAPL*LAPPAPVCGRG
Trigger: GCCGCGCCCACACACTGGAGCGGGAGGTGCCAGGCATAGAGGAGCTGCTGGTGAGTGGGCGGCACCCCAGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CAA 90 bp TGGGGGCACAGGGCCCCTGCCAGCCGGCTCTTGGCCAGCTCCACTTaGGTGAGGCAGCTCCTTGGTGAGACAGGCTCCAGGTCCACCCGG +
Preference number: 6 (lower is better)
Translates to: WGHRAPASRLLASST*VRQLLGETGSRSTR
Trigger: CCGGGTGGACCTGGAGCCTGTCTCACCAAGGAGCTGCCTCACCAAAGTGGAGCTGGCCAAGAGCCGGCTGGCAGGGGCCCTGTGCCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CCA 72 bp TTGCGGTGCTTGACCTCGGCGCCAGGGGCTCGCTCCTaGCCCTGGAGCCGCAGCACGTTCTCCTCAATGCCC +
Preference number: 6 (lower is better)
Translates to: LRCLTSAPGARS*PWSRSTFSSMP
Trigger: GGGCATTGAGGAGAACGTGCTGCGGCTCCAGGGCCAGGAGCGAGCCCCTGGCGCCGAGGTCAAGCACCGCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CAA 72 bp TTGAGGCTCTCGGCCTCCAGCTTCCGGGCTTCCATCTaGACTTCCCTCCGGAGCGGGGAGCCCCCGCCAGCC +
Preference number: 6 (lower is better)
Translates to: LRLSASSFRASI*TSLRSGEPPPA
Trigger: GGCTGGCGGGGGCTCCCCGCTCCGGAGGGAAGTCAAGATGGAAGCCCGGAAGCTGGAGGCCGAGAGCCTCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CAA 90 bp CTGCGGGCCAGGGCACCGAGCAGGGTGTCGGGGCTGGGTGCCTCATaGGGGTCACCTGCCTCATCAGAAGAGGAGGAGGAGCTGCTGCCT +
Preference number: 6 (lower is better)
Translates to: LRARAPSRVSGLGAS*GSPASSEEEEELLP
Trigger: AGGCAGCAGCTCCTCCTCCTCTTCTGATGAGGCAGGTGACCCCAATGAGGCACCCAGCCCCGACACCCTGCTCGGTGCCCTGGCCCGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CAA 90 bp TTCTTAAGGCCGAACCAGCTGGCGATGCTGCTGGTGTTGCGGTGCTaGACCTCGGCGCCAGGGGCTCGCTCCTGGCCCTGGAGCCGCAGC +
Preference number: 6 (lower is better)
Translates to: FLRPNQLAMLLVLRC*TSAPGARSWPWSRS
Trigger: GCTGCGGCTCCAGGGCCAGGAGCGAGCCCCTGGCGCCGAGGTCAAGCACCGCAACACCAGCAGCATCGCCAGCTGGTTCGGCCTTAAGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS GCA 72 bp CCGGAGCAGCGGGTAGCAGTGCAGGGAAGGCTGGCATaGTGGGGTGCCGCCCACTCACCAGCAGCTCCTCTA +
Preference number: 6 (lower is better)
Translates to: PEQRVAVQGRLA*WGAAHSPAAPL
Trigger: TAGAGGAGCTGCTGGTGAGTGGGCGGCACCCCAGCATGCCAGCCTTCCCTGCACTGCTACCCGCTGCTCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CCA 72 bp GTCTGCGGGCCAGGGCACCGAGCAGGGTGTCGGGGCTaGGTGCCTCATTGGGGTCACCTGCCTCATCAGAAG +
Preference number: 6 (lower is better)
Translates to: VCGPGHRAGCRG*VPHWGHLPHQK
Trigger: CTTCTGATGAGGCAGGTGACCCCAATGAGGCACCCAGCCCCGACACCCTGCTCGGTGCCCTGGCCCGCAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS TCA 72 bp TCGCTGCTCGGCTTTCCAGGAGGTTTTCCGCAGCCCTaGAGAGGGCCCACCAGGCCATTCCGGGGCCCACAG +
Preference number: 6 (lower is better)
Translates to: SLLGFPGGFPQP*RGPTRPFRGPQ
Trigger: CTGTGGGCCCCGGAATGGCCTGGTGGGCCCTCTTCAGGGCTGCGGAAAACCTCCTGGAAAGCCGAGCAGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS GCA 72 bp CCTGGCTGGGCTTCTTGGATGAGTTGCCTGGGGTCCTaGGGCCGGGATGGGGAGACTCCGAGCCTGCCTTGT +
Preference number: 6 (lower is better)
Translates to: PGWASWMSCLGS*GRDGETPSLPC
Trigger: ACAAGGCAGGCTCGGAGTCTCCCCATCCCGGCCGCAGGACCCCAGGCAACTCATCCAAGAAGCCCAGCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS GCA 72 bp CGGGCCCCGGGATCCCCCATAAGTCCAGGTTCCTGCTaGTTCAGGCTGTTTGTGCCCAAGGCCACTGCCCCC +
Preference number: 6 (lower is better)
Translates to: RAPGSPISPGSC*FRLFVPKATAP
Trigger: GGGGGCAGTGGCCTTGGGCACAAACAGCCTGAAGCAGCAGGAACCTGGACTTATGGGGGATCCCGGGGCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CCA 72 bp GAGCAGCGGGTAGCAGTGCAGGGAAGGCTGGCATGCTaGGGTGCCGCCCACTCACCAGCAGCTCCTCTATGC +
Preference number: 6 (lower is better)
Translates to: EQRVAVQGRLAC*GAAHSPAAPLC
Trigger: GCATAGAGGAGCTGCTGGTGAGTGGGCGGCACCCCAGCATGCCAGCCTTCCCTGCACTGCTACCCGCTGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CAA 90 bp AGCTTGCTCTTCTTAAGGCCGAACCAGCTGGCGATGCTGCTGGTGTaGCGGTGCTTGACCTCGGCGCCAGGGGCTCGCTCCTGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: SLLFLRPNQLAMLLV*RCLTSAPGARSWPW
Trigger: CCAGGGCCAGGAGCGAGCCCCTGGCGCCGAGGTCAAGCACCGCAACACCAGCAGCATCGCCAGCTGGTTCGGCCTTAAGAAGAGCAAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CAA 90 bp GGTGGGCACATGAGAGGGTCCGAGGAGCTGCCGGCTGCCCTAGTATaGGGGAAGGTCCAGTTCTTGGCCAGCTGGACAGGAGGGGTGGGG +
Preference number: 6 (lower is better)
Translates to: GGHMRGSEELPAALV*GKVQFLASWTGGVG
Trigger: CCCCACCCCTCCTGTCCAGCTGGCCAAGAACTGGACCTTCCCCAATACTAGGGCAGCCGGCAGCTCCTCGGACCCTCTCATGTGCCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CAA 90 bp CTGGGGCCTGGCGCCCTTAGCTCTAGCTCTGGCTCCAGTGCTCACTaGCTGGGTTATCCCAGGGCAAGGTCCCGATCCCTGGGCCTCAGG +
Preference number: 6 (lower is better)
Translates to: LGPGALSSSSGSSAH*LGYPRARSRSLGLR
Trigger: CCTGAGGCCCAGGGATCGGGACCTTGCCCTGGGATAACCCAGCAAGTGAGCACTGGAGCCAGAGCTAGAGCTAAGGGCGCCAGGCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477361.1
ENST00000491441.1
CDS TCA 72 bp GGCCCTTCCCTTTGTCAGGCTTGGGGGACTCCTTGGTaGCTAGCGGAGCCCCAGGTCGAGGCACCACCTTGG +
Preference number: 6 (lower is better)
Translates to: GPSLCQAWGTPW*LAEPQVEAPPW
Trigger: CCAAGGTGGTGCCTCGACCTGGGGCTCCGCTAGTCACCAAGGAGTCCCCCAAGCCTGACAAAGGGAAGGGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS GCA 72 bp CAGGGTGTCGGGGCTGGGTGCCTCATTGGGGTCACCTaGCTCATCAGAAGAGGAGGAGGAGCTGCTGCCTGG +
Preference number: 6 (lower is better)
Translates to: QGVGAGCLIGVT*LIRRGGGAAAW
Trigger: CCAGGCAGCAGCTCCTCCTCCTCTTCTGATGAGGCAGGTGACCCCAATGAGGCACCCAGCCCCGACACCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CCA 72 bp CCAGAACGGTCACCTTGCCGAAATCAGGTGTTGAGCTaGGCCAGGGCAGGCCGGATCCGCCAGGTCCATGGC +
Preference number: 6 (lower is better)
Translates to: PERSPCRNQVLS*ARAGRIRQVHG
Trigger: GCCATGGACCTGGCGGATCCGGCCTGCCCTGGCCCAGCTCAACACCTGATTTCGGCAAGGTGACCGTTCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000480927.1
CDS CCA 72 bp ACCTGCCTCATCAGAAGAGGAGGAGGAGCTGCTGCCTaGGGCACAGTTTGGGCCAGAGCTGGTGCCCTGGGC +
Preference number: 6 (lower is better)
Translates to: TCLIRRGGGAAA*GTVWARAGALG
Trigger: GCCCAGGGCACCAGCTCTGGCCCAAACTGTGCCCCAGGCAGCAGCTCCTCCTCCTCTTCTGATGAGGCAGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS CCA 72 bp CCTGGGTCTTCACAGGGATCATCAGGACAGGTCTCATaGCCCCGGTGGCCCGGAGCAGCGGGTAGCAGTGCA +
Preference number: 6 (lower is better)
Translates to: PGSSQGSSGQVS*PRWPGAAGSSA
Trigger: TGCACTGCTACCCGCTGCTCCGGGCCACCGGGGCCATGAGACCTGTCCTGATGATCCCTGTGAAGACCCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CAA 72 bp TTCTTAAGGCCGAACCAGCTGGCGATGCTGCTGGTGTaGCGGTGCTTGACCTCGGCGCCAGGGGCTCGCTCC +
Preference number: 6 (lower is better)
Translates to: FLRPNQLAMLLV*RCLTSAPGARS
Trigger: GGAGCGAGCCCCTGGCGCCGAGGTCAAGCACCGCAACACCAGCAGCATCGCCAGCTGGTTCGGCCTTAAGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CAA 72 bp GCTAAGTCTGCCCGGCCGGCGCGCGCCGCTTCCGCTTaGGTGGGAAGGACCTCCCTTCCCCCTTATAGAAAC +
Preference number: 6 (lower is better)
Translates to: AKSARPARAASA*VGRTSLPPYRN
Trigger: GTTTCTATAAGGGGGAAGGGAGGTCCTTCCCACCAAAGCGGAAGCGGCGCGCGCCGGCCGGGCAGACTTAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480927.1
CDS CAA 90 bp GTACTACCACAGTCTGCCCAGGGAGGGCCCTTCCCTTTGTCAGGCTaGGGGGACTCCTTGGTGACTAGCGGAGCCCCAGGTCGAGGCACC +
Preference number: 6 (lower is better)
Translates to: VLPQSAQGGPFPLSG*GDSLVTSGAPGRGT
Trigger: GGTGCCTCGACCTGGGGCTCCGCTAGTCACCAAGGAGTCCCCCAAGCCTGACAAAGGGAAGGGCCCTCCCTGGGCAGACTGTGGTAGTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS TCA 72 bp AGCATCCAGAACGGTCACCTTGCCGAAATCAGGTGTTaGGCTGGGCCAGGGCAGGCCGGATCCGCCAGGTCC +
Preference number: 6 (lower is better)
Translates to: SIQNGHLAEIRC*AGPGQAGSARS
Trigger: GGACCTGGCGGATCCGGCCTGCCCTGGCCCAGCTCAACACCTGATTTCGGCAAGGTGACCGTTCTGGATGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000480927.1
CDS GCA 72 bp ACTCGGGCCCCGGGATCCCCCATAAGTCCAGGTTCCTaGTGCTTCAGGCTGTTTGTGCCCAAGGCCACTGCC +
Preference number: 6 (lower is better)
Translates to: TRAPGSPISPGS*CFRLFVPKATA
Trigger: GGCAGTGGCCTTGGGCACAAACAGCCTGAAGCAGCAGGAACCTGGACTTATGGGGGATCCCGGGGCCCGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS GCA 72 bp GGGTGGGCACATGAGAGGGTCCGAGGAGCTGCCGGCTaGCCTAGTATTGGGGAAGGTCCAGTTCTTGGCCAG +
Preference number: 6 (lower is better)
Translates to: GWAHERVRGAAG*PSIGEGPVLGQ
Trigger: CTGGCCAAGAACTGGACCTTCCCCAATACTAGGGCAGCCGGCAGCTCCTCGGACCCTCTCATGTGCCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CCA 72 bp GTAGGTGGGCACCTGCAGTGGGGATGGAGGTGGCTCTaGGGAAGGCCCCCTAAAGGTGCTCCGAGAAAGGTC +
Preference number: 6 (lower is better)
Translates to: VGGHLQWGWRWL*GRPPKGAPRKV
Trigger: GACCTTTCTCGGAGCACCTTTAGGGGGCCTTCCCCAGAGCCACCTCCATCCCCACTGCAGGTGCCCACCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CCA 72 bp CCTGACTTGGGTCAGTGGGGCCAGGTACTAGGGGTGTaGACTGGGCCGTGGTACTACCACAGTCTGCCCAGG +
Preference number: 6 (lower is better)
Translates to: PDLGQWGQVLGV*TGPWYYHSLPR
Trigger: CCTGGGCAGACTGTGGTAGTACCACGGCCCAGTCCACACCCCTAGTACCTGGCCCCACTGACCCAAGTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CCA 72 bp AGTCTGCCCGGCCGGCGCGCGCCGCTTCCGCTTTGGTaGGAAGGACCTCCCTTCCCCCTTATAGAAACACTT +
Preference number: 6 (lower is better)
Translates to: SLPGRRAPLPLW*EGPPFPLIETL
Trigger: AAGTGTTTCTATAAGGGGGAAGGGAGGTCCTTCCCACCAAAGCGGAAGCGGCGCGCGCCGGCCGGGCAGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480927.1
CDS CCA 72 bp CTAAGTCTGCCCGGCCGGCGCGCGCCGCTTCCGCTTTaGTGGGAAGGACCTCCCTTCCCCCTTATAGAAACA +
Preference number: 6 (lower is better)
Translates to: LSLPGRRAPLPL*WEGPPFPLIET
Trigger: TGTTTCTATAAGGGGGAAGGGAGGTCCTTCCCACCAAAGCGGAAGCGGCGCGCGCCGGCCGGGCAGACTTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480927.1
CDS CAA 72 bp AGTGCCCGACGCAGGTCTTCCGCCTTGGCCATCAGCTaGGAGATGTTGAGGCTCTCGGCCTCCAGCTTCCGG +
Preference number: 6 (lower is better)
Translates to: SARRRSSALAIS*EMLRLSASSFR
Trigger: CCGGAAGCTGGAGGCCGAGAGCCTCAACATCTCCAAGCTGATGGCCAAGGCGGAAGACCTGCGTCGGGCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CAA 90 bp AGGACGCGAGCTAAGTCTGCCCGGCCGGCGCGCGCCGCTTCCGCTTaGGTGGGAAGGACCTCCCTTCCCCCTTATAGAAACACTTTCTCC +
Preference number: 6 (lower is better)
Translates to: RTRAKSARPARAASA*VGRTSLPPYRNTFS
Trigger: GGAGAAAGTGTTTCTATAAGGGGGAAGGGAGGTCCTTCCCACCAAAGCGGAAGCGGCGCGCGCCGGCCGGGCAGACTTAGCTCGCGTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480927.1
CDS CAA 90 bp TCCTCTTCCAGTGCCCGACGCAGGTCTTCCGCCTTGGCCATCAGCTaGGAGATGTTGAGGCTCTCGGCCTCCAGCTTCCGGGCTTCCATC +
Preference number: 6 (lower is better)
Translates to: SSSSARRRSSALAIS*EMLRLSASSFRASI
Trigger: GATGGAAGCCCGGAAGCTGGAGGCCGAGAGCCTCAACATCTCCAAGCTGATGGCCAAGGCGGAAGACCTGCGTCGGGCACTGGAAGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CAA 90 bp CTCTTGGGGTCAGAAGACACCGGCTGGAAATCCCCGTACTCAGGCTaGGGCTCCCGCCAGCTCTTGGATGGCAGCTCCTTGCCATCCACC +
Preference number: 6 (lower is better)
Translates to: LLGSEDTGWKSPYSG*GSRQLLDGSSLPST
Trigger: GGTGGATGGCAAGGAGCTGCCATCCAAGAGCTGGCGGGAGCCCAAGCCTGAGTACGGGGATTTCCAGCCGGTGTCTTCTGACCCCAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS GCA 72 bp GCTTGGTGGGGCTGCTGTGAGGGCTCTTATTGGGCTTaGCCAGGCTTGGGGCTGAGGTTGGCACTTTGGCAG +
Preference number: 6 (lower is better)
Translates to: AWWGCCEGSYWA*PGLGLRLALWQ
Trigger: CTGCCAAAGTGCCAACCTCAGCCCCAAGCCTGGGCAAGCCCAATAAGAGCCCTCACAGCAGCCCCACCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CCA 72 bp CGTTCTCCTCAATGCCCTTCATCACCTTCTCCTCGATaGCTGAGTGTGGGGCCAGCCCCTCAGGGCCCTGAC +
Preference number: 6 (lower is better)
Translates to: RSPQCPSSPSPR*LSVGPAPQGPD
Trigger: GTCAGGGCCCTGAGGGGCTGGCCCCACACTCAGCCATCGAGGAGAAGGTGATGAAGGGCATTGAGGAGAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CCA 72 bp CAGAAGACACCGGCTGGAAATCCCCGTACTCAGGCTTaGGCTCCCGCCAGCTCTTGGATGGCAGCTCCTTGC +
Preference number: 6 (lower is better)
Translates to: QKTPAGNPRTQA*APASSWMAAPC
Trigger: GCAAGGAGCTGCCATCCAAGAGCTGGCGGGAGCCCAAGCCTGAGTACGGGGATTTCCAGCCGGTGTCTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CAA 72 bp TTGGTGACTAGCGGAGCCCCAGGTCGAGGCACCACCTaGGTTGGTGACTTGGAAGGGAGCTTGGTGGGGCTG +
Preference number: 6 (lower is better)
Translates to: LVTSGAPGRGTT*VGDLEGSLVGL
Trigger: CAGCCCCACCAAGCTCCCTTCCAAGTCACCAACCAAGGTGGTGCCTCGACCTGGGGCTCCGCTAGTCACCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CAA 72 bp TTGGTGGCCTCTGTGCGGCGGTTCAGCGCTGGCAGCTaGCTCTTCTTAAGGCCGAACCAGCTGGCGATGCTG +
Preference number: 6 (lower is better)
Translates to: LVASVRRFSAGS*LFLRPNQLAML
Trigger: CAGCATCGCCAGCTGGTTCGGCCTTAAGAAGAGCAAGCTGCCAGCGCTGAACCGCCGCACAGAGGCCACCAA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CAA 72 bp GGCGCCCTTAGCTCTAGCTCTGGCTCCAGTGCTCACTaGCTGGGTTATCCCAGGGCAAGGTCCCGATCCCTG +
Preference number: 6 (lower is better)
Translates to: GALSSSSGSSAH*LGYPRARSRSL
Trigger: CAGGGATCGGGACCTTGCCCTGGGATAACCCAGCAAGTGAGCACTGGAGCCAGAGCTAGAGCTAAGGGCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477361.1
ENST00000491441.1
CDS CAA 90 bp AGTGCCCGACGCAGGTCTTCCGCCTTGGCCATCAGCTTGGAGATGTaGAGGCTCTCGGCCTCCAGCTTCCGGGCTTCCATCTTGACTTCC +
Preference number: 6 (lower is better)
Translates to: SARRRSSALAISLEM*RLSASSFRASILTS
Trigger: GGAAGTCAAGATGGAAGCCCGGAAGCTGGAGGCCGAGAGCCTCAACATCTCCAAGCTGATGGCCAAGGCGGAAGACCTGCGTCGGGCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS TCA 72 bp GCAGGTCTTCCGCCTTGGCCATCAGCTTGGAGATGTTaGGGCTCTCGGCCTCCAGCTTCCGGGCTTCCATCT +
Preference number: 6 (lower is better)
Translates to: AGLPPWPSAWRC*GSRPPASGLPS
Trigger: AGATGGAAGCCCGGAAGCTGGAGGCCGAGAGCCTCAACATCTCCAAGCTGATGGCCAAGGCGGAAGACCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS GCA 72 bp ATAAGTCTCCCGCTGGTTTTCGTTGGCCTGGGCAAGTaGCGAGTTCTCTGCCTCCAGCTCCCGCAGTCGGTG +
Preference number: 6 (lower is better)
Translates to: ISLPLVFVGLGK*RVLCLQLPQSV
Trigger: CACCGACTGCGGGAGCTGGAGGCAGAGAACTCGGCACTTGCCCAGGCCAACGAAAACCAGCGGGAGACTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335999.7
ENST00000477361.1
ENST00000491441.1
CDS GCA 72 bp GGGGTCCTCCTCCCAGAGGGTGCAGCACTGAGACTGTaGGACACACAGGCCGTACCTTACTGGAGAAACTGG +
Preference number: 6 (lower is better)
Translates to: GVLLPEGAALRL*DTQAVPYWRNW
Trigger: CCAGTTTCTCCAGTAAGGTACGGCCTGTGTGTCGCACAGTCTCAGTGCTGCACCCTCTGGGAGGAGGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS GCA 72 bp CTCATGACCACATCCAGCACGGCCAGGGCTCAGACCTaGATCACACCATGGGATCCTCCCACCCCACCAAAC +
Preference number: 6 (lower is better)
Translates to: LMTTSSTARAQT*ITPWDPPTPPN
Trigger: GTTTGGTGGGGTGGGAGGATCCCATGGTGTGATGCAGGTCTGAGCCCTGGCCGTGCTGGATGTGGTCATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477361.1
ENST00000491441.1
CDS CCA 72 bp CTTGTTCTTGGTGGCCTCTGTGCGGCGGTTCAGCGCTaGCAGCTTGCTCTTCTTAAGGCCGAACCAGCTGGC +
Preference number: 6 (lower is better)
Translates to: LVLGGLCAAVQR*QLALLKAEPAG
Trigger: GCCAGCTGGTTCGGCCTTAAGAAGAGCAAGCTGCCAGCGCTGAACCGCCGCACAGAGGCCACCAAGAACAAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CCA 72 bp CTTTCTAGCTCCAGCCTCACTAGGCACCCACTGCCCTaGCAGGAGCTAGGCCCCGTCAGATCAGGCTCTTTG +
Preference number: 6 (lower is better)
Translates to: LSSSSLTRHPLP*QELGPVRSGSL
Trigger: CAAAGAGCCTGATCTGACGGGGCCTAGCTCCTGCCAGGGCAGTGGGTGCCTAGTGAGGCTGGAGCTAGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477361.1
ENST00000491441.1
CDS CCA 72 bp ACTTGCTGGGTTATCCCAGGGCAAGGTCCCGATCCCTaGGCCTCAGGCTCCTCCTGGACAAAGTGGGAAGTG +
Preference number: 6 (lower is better)
Translates to: TCWVIPGQGPDP*ASGSSWTKWEV
Trigger: CACTTCCCACTTTGTCCAGGAGGAGCCTGAGGCCCAGGGATCGGGACCTTGCCCTGGGATAACCCAGCAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477361.1
ENST00000491441.1
CDS CAA 72 bp TTCTCCTCTTCCAGTGCCCGACGCAGGTCTTCCGCCTaGGCCATCAGCTTGGAGATGTTGAGGCTCTCGGCC +
Preference number: 6 (lower is better)
Translates to: FSSSSARRRSSA*AISLEMLRLSA
Trigger: GGCCGAGAGCCTCAACATCTCCAAGCTGATGGCCAAGGCGGAAGACCTGCGTCGGGCACTGGAAGAGGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CAA 72 bp TCAGAAGACACCGGCTGGAAATCCCCGTACTCAGGCTaGGGCTCCCGCCAGCTCTTGGATGGCAGCTCCTTG +
Preference number: 6 (lower is better)
Translates to: SEDTGWKSPYSG*GSRQLLDGSSL
Trigger: CAAGGAGCTGCCATCCAAGAGCTGGCGGGAGCCCAAGCCTGAGTACGGGGATTTCCAGCCGGTGTCTTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CAA 72 bp GGATCCAGCCGCGGTGGCTTGGTCTTAGGAAGATTCTaGCTGGGGGTCCCACTGCTACCATGGTCTGGGGGT +
Preference number: 6 (lower is better)
Translates to: GSSRGGLVLGRF*LGVPLLPWSGG
Trigger: ACCCCCAGACCATGGTAGCAGTGGGACCCCCAGCAAGAATCTTCCTAAGACCAAGCCACCGCGGCTGGATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CAA 90 bp TCCTTGTTCTTGGTGGCCTCTGTGCGGCGGTTCAGCGCTGGCAGCTaGCTCTTCTTAAGGCCGAACCAGCTGGCGATGCTGCTGGTGTTG +
Preference number: 6 (lower is better)
Translates to: SLFLVASVRRFSAGS*LFLRPNQLAMLLVL
Trigger: CAACACCAGCAGCATCGCCAGCTGGTTCGGCCTTAAGAAGAGCAAGCTGCCAGCGCTGAACCGCCGCACAGAGGCCACCAAGAACAAGGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS GCA 72 bp CCTTGGTTGGTGACTTGGAAGGGAGCTTGGTGGGGCTaGTGTGAGGGCTCTTATTGGGCTTGCCCAGGCTTG +
Preference number: 6 (lower is better)
Translates to: PWLVTWKGAWWG*CEGSYWACPGL
Trigger: CAAGCCTGGGCAAGCCCAATAAGAGCCCTCACAGCAGCCCCACCAAGCTCCCTTCCAAGTCACCAACCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS GCA 72 bp CACTGCTACCATGGTCTGGGGGTGGGAAGGTCCCAATaGCACTGTCCAAGGTTCGAGTCAAGGAGCCACAGG +
Preference number: 6 (lower is better)
Translates to: HCYHGLGVGRSQ*HCPRFESRSHR
Trigger: CCTGTGGCTCCTTGACTCGAACCTTGGACAGTGGCATTGGGACCTTCCCACCCCCAGACCATGGTAGCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS GCA 72 bp GCTCCTCCCTATTCATCCTTCAGGGCTCCCAGGCGATaGTCCTGCAAGATTGTACACCAGCCTCCCCCACCA +
Preference number: 6 (lower is better)
Translates to: APPYSSFRAPRR*SCKIVHQPPPP
Trigger: TGGTGGGGGAGGCTGGTGTACAATCTTGCAGGAGCATCGCCTGGGAGCCCTGAAGGATGAATAGGGAGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000477361.1
ENST00000491441.1
CDS CCA 72 bp CCAGACAGCGCTCATAAGTCTCCCGCTGGTTTTCGTTaGCCTGGGCAAGTGCCGAGTTCTCTGCCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: PDSAHKSPAGFR*PGQVPSSLPPA
Trigger: AGCTGGAGGCAGAGAACTCGGCACTTGCCCAGGCCAACGAAAACCAGCGGGAGACTTATGAGCGCTGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335999.7
ENST00000477361.1
ENST00000491441.1
CDS CCA 72 bp AATGGACCCGCCCAAGGCGGAAAGACGGGGAATCACTaGAGGGCAACAGCCCATGTCCTCCAAGCCCTTAGT +
Preference number: 6 (lower is better)
Translates to: NGPAQGGKTGNH*RATAHVLQALS
Trigger: ACTAAGGGCTTGGAGGACATGGGCTGTTGCCCTCCAGTGATTCCCCGTCTTTCCGCCTTGGGCGGGTCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477361.1
ENST00000491441.1
CDS CCA 72 bp TGGTTCAGCAACGCCTGTACCACATGGTTGGCAACCTaGGGACAGAAAGCCCCGAGGCAGAGCCATCAGCTG +
Preference number: 6 (lower is better)
Translates to: WFSNACTTWLAT*GQKAPRQSHQL
Trigger: CAGCTGATGGCTCTGCCTCGGGGCTTTCTGTCCCCAGGTTGCCAACCATGTGGTACAGGCGTTGCTGAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491441.1
CDS CAA 72 bp GGGCTCTTCTCCGAGGTTGGAGGCAGCTTTAGAAACTaGAGACCCCTAGCTGGAGAGGGCAGAAGGGGTCCC +
Preference number: 6 (lower is better)
Translates to: GLFSEVGGSFRN*RPLAGEGRRGP
Trigger: GGGACCCCTTCTGCCCTCTCCAGCTAGGGGTCTCAAGTTTCTAAAGCTGCCTCCAACCTCGGAGAAGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CAA 72 bp CTCACCTTCTGGTTCAGCAACGCCTGTACCACATGGTaGGCAACCTGGGGACAGAAAGCCCCGAGGCAGAGC +
Preference number: 6 (lower is better)
Translates to: LTFWFSNACTTW*ATWGQKAPRQS
Trigger: GCTCTGCCTCGGGGCTTTCTGTCCCCAGGTTGCCAACCATGTGGTACAGGCGTTGCTGAACCAGAAGGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491441.1
CDS CAA 90 bp CTCCCTATTCATCCTTCAGGGCTCCCAGGCGATGCTCCTGCAAGATaGTACACCAGCCTCCCCCACCAGACAGTCAACTCCGTGAGGGCA +
Preference number: 6 (lower is better)
Translates to: LPIHPSGLPGDAPAR*YTSLPHQTVNSVRA
Trigger: TGCCCTCACGGAGTTGACTGTCTGGTGGGGGAGGCTGGTGTACAATCTTGCAGGAGCATCGCCTGGGAGCCCTGAAGGATGAATAGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000477361.1
ENST00000491441.1
CDS CAA 90 bp TCTGGGTTACTCACCTTCTGGTTCAGCAACGCCTGTACCACATGGTaGGCAACCTGGGGACAGAAAGCCCCGAGGCAGAGCCATCAGCTG +
Preference number: 6 (lower is better)
Translates to: SGLLTFWFSNACTTW*ATWGQKAPRQSHQL
Trigger: CAGCTGATGGCTCTGCCTCGGGGCTTTCTGTCCCCAGGTTGCCAACCATGTGGTACAGGCGTTGCTGAACCAGAAGGTGAGTAACCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491441.1
CDS TCA 72 bp CTCTTTGTGCACGATGGTCCTTCTGCTGGGGTCTCTTaGCACCACCCGCTCCTTTCGACTTGGCCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: LFVHDGPSAGVS*HHPLLSTWPAP
Trigger: AGGAGCTGGCCAAGTCGAAAGGAGCGGGTGGTGTCAAGAGACCCCAGCAGAAGGACCATCGTGCACAAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477361.1
ENST00000491441.1
CDS TCA 72 bp CTGAGAACACGACTCAGCACATGGGGAGAATACAGTTaGGCCTGGGGCCTGGCGCCCTTAGCTCTAGCTCTG +
Preference number: 6 (lower is better)
Translates to: LRTRLSTWGEYS*AWGLAPLALAL
Trigger: CAGAGCTAGAGCTAAGGGCGCCAGGCCCCAGGCTCAACTGTATTCTCCCCATGTGCTGAGTCGTGTTCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477361.1
ENST00000491441.1
CDS GCA 72 bp CCCTATTCATCCTTCAGGGCTCCCAGGCGATGCTCCTaGAAGATTGTACACCAGCCTCCCCCACCAGACAGT +
Preference number: 6 (lower is better)
Translates to: PYSSFRAPRRCS*KIVHQPPPPDS
Trigger: ACTGTCTGGTGGGGGAGGCTGGTGTACAATCTTGCAGGAGCATCGCCTGGGAGCCCTGAAGGATGAATAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000477361.1
ENST00000491441.1
CDS CCA 72 bp TCAGTCTCTTCCAGGGCTCTCAGCACCTCCAGAATCTaGGCCTTCTTCCGAAGGAACGGGGATAGGGCATCC +
Preference number: 6 (lower is better)
Translates to: SVSSRALSTSRI*AFFRRNGDRAS
Trigger: GGATGCCCTATCCCCGTTCCTTCGGAAGAAGGCCCAGATTCTGGAGGTGCTGAGAGCCCTGGAAGAGACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335999.7
CDS CCA 72 bp TTAGGAAGATTCTTGCTGGGGGTCCCACTGCTACCATaGTCTGGGGGTGGGAAGGTCCCAATGCCACTGTCC +
Preference number: 6 (lower is better)
Translates to: LGRFLLGVPLLP*SGGGKVPMPLS
Trigger: GGACAGTGGCATTGGGACCTTCCCACCCCCAGACCATGGTAGCAGTGGGACCCCCAGCAAGAATCTTCCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CCA 72 bp GCACTGAGACTGTGCGACACACAGGCCGTACCTTACTaGAGAAACTGGTCTCCCCACATCACTCCCTCCTGC +
Preference number: 6 (lower is better)
Translates to: ALRLCDTQAVPY*RNWSPHITPSC
Trigger: GCAGGAGGGAGTGATGTGGGGAGACCAGTTTCTCCAGTAAGGTACGGCCTGTGTGTCGCACAGTCTCAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433948.5
CDS CCA 72 bp GGGCTTCTCCCCAGGGTGTCTGGGTTACTCACCTTCTaGTTCAGCAACGCCTGTACCACATGGTTGGCAACC +
Preference number: 6 (lower is better)
Translates to: GLLPRVSGLLTF*FSNACTTWLAT
Trigger: GGTTGCCAACCATGTGGTACAGGCGTTGCTGAACCAGAAGGTGAGTAACCCAGACACCCTGGGGAGAAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477361.1
ENST00000491441.1
CDS CAA 72 bp CCTGAGAACACGACTCAGCACATGGGGAGAATACAGTaGAGCCTGGGGCCTGGCGCCCTTAGCTCTAGCTCT +
Preference number: 6 (lower is better)
Translates to: PENTTQHMGRIQ*SLGPGALSSSS
Trigger: AGAGCTAGAGCTAAGGGCGCCAGGCCCCAGGCTCAACTGTATTCTCCCCATGTGCTGAGTCGTGTTCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477361.1
ENST00000491441.1
CDS CAA 90 bp TCAGATCAGGCTCTTTGTGCACGATGGTCCTTCTGCTGGGGTCTCTaGACACCACCCGCTCCTTTCGACTTGGCCAGCTCCTCCCTATTC +
Preference number: 6 (lower is better)
Translates to: SDQALCARWSFCWGL*TPPAPFDLASSSLF
Trigger: GAATAGGGAGGAGCTGGCCAAGTCGAAAGGAGCGGGTGGTGTCAAGAGACCCCAGCAGAAGGACCATCGTGCACAAAGAGCCTGATCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477361.1
ENST00000491441.1
CDS TCA 72 bp GCTCCTTGCCATCCACCCTGTTTAGCAGCTGCTGCATaGAGGTGTCTGCACCTTGGTACATGCCAGCCAGCT +
Preference number: 6 (lower is better)
Translates to: APCHPPCLAAAA*RCLHLGTCQPA
Trigger: AGCTGGCTGGCATGTACCAAGGTGCAGACACCTTCATGCAGCAGCTGCTAAACAGGGTGGATGGCAAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335999.7
ENST00000433948.5
CDS CCA 72 bp TTACTCACCTTCTGGTTCAGCAACGCCTGTACCACATaGTTGGCAACCTGGGGACAGAAAGCCCCGAGGCAG +
Preference number: 6 (lower is better)
Translates to: LLTFWFSNACTT*LATWGQKAPRQ
Trigger: CTGCCTCGGGGCTTTCTGTCCCCAGGTTGCCAACCATGTGGTACAGGCGTTGCTGAACCAGAAGGTGAGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491441.1
CDS TCA 72 bp CATGTAGGAGACAGACTGATGACTAGACGAAGCTCATaGCCACATCCAGCACGGCCAGGGCTCAGACCTGCA +
Preference number: 6 (lower is better)
Translates to: HVGDRLMTRRSS*PHPARPGLRPA
Trigger: TGCAGGTCTGAGCCCTGGCCGTGCTGGATGTGGTCATGAGCTTCGTCTAGTCATCAGTCTGTCTCCTACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477361.1
ENST00000491441.1
CDS CCA 72 bp TACCTAGTCCCACCTCTGTCTCTAGGTAGAACAGAATaGACCCGCCCAAGGCGGAAAGACGGGGAATCACTG +
Preference number: 6 (lower is better)
Translates to: YLVPPLSLGRTE*TRPRRKDGESL
Trigger: CAGTGATTCCCCGTCTTTCCGCCTTGGGCGGGTCCATTCTGTTCTACCTAGAGACAGAGGTGGGACTAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477361.1
ENST00000491441.1
CDS GCA 72 bp CTACAACCTCCACAACCTGGGTTCAAGCGATTCTCCTaGCTCAGCCTTCCTAGTAGCTGGGACTACAGGAGT +
Preference number: 6 (lower is better)
Translates to: LQPPQPGFKRFS*LSLPSSWDYRS
Trigger: ACTCCTGTAGTCCCAGCTACTAGGAAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGTTGTGGAGGTTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477361.1
CDS CCA 72 bp CATTTGCCTCCCCATCCAAACTCACATGCCTCCTGGTaGGATCCCTGGCATGTAGGAGACAGACTGATGACT +
Preference number: 6 (lower is better)
Translates to: HLPPHPNSHASW*DPWHVGDRLMT
Trigger: AGTCATCAGTCTGTCTCCTACATGCCAGGGATCCCACCAGGAGGCATGTGAGTTTGGATGGGGAGGCAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477361.1
ENST00000491441.1
CDS TCA 72 bp CTTCCTCCCTTACAGGGTCATTGTGAGAGTCAAATGTaGCCACGTAGGGAAGAGCACCCTGAGAACACGACT +
Preference number: 6 (lower is better)
Translates to: LPPLQGHCESQM*PRREEHPENTT
Trigger: AGTCGTGTTCTCAGGGTGCTCTTCCCTACGTGGTCACATTTGACTCTCACAATGACCCTGTAAGGGAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477361.1
ENST00000491441.1
CDS CCA 72 bp AGTCATGCTCAAATCAGTGACCACTGCTCAGAGACCTaGCCTTACCTAGTCCCACCTCTGTCTCTAGGTAGA +
Preference number: 6 (lower is better)
Translates to: SHAQISDHCSET*PYLVPPLSLGR
Trigger: TCTACCTAGAGACAGAGGTGGGACTAGGTAAGGCCAGGTCTCTGAGCAGTGGTCACTGATTTGAGCATGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477361.1
ENST00000491441.1
CDS CCA 72 bp TCCAGTAGATGGGCAACCCTTCCTATTATAAAAGGGTaGAAGCTTGGTCCATCACTGACTACCCCTTGTGCC +
Preference number: 6 (lower is better)
Translates to: SSRWATLPIIKG*KLGPSLTTPCA
Trigger: GGCACAAGGGGTAGTCAGTGATGGACCAAGCTTCCACCCTTTTATAATAGGAAGGGTTGCCCATCTACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477361.1
CDS TCA 72 bp TCTCCTTGGAGCTTAGGTCAGTGTGACCTATATGCATaGCACTGTAATAACTCAGGGCCAGGCTGGGTATCT +
Preference number: 6 (lower is better)
Translates to: SPWSLGQCDLYA*HCNNSGPGWVS
Trigger: AGATACCCAGCCTGGCCCTGAGTTATTACAGTGTCATGCATATAGGTCACACTGACCTAAGCTCCAAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477361.1
ENST00000491441.1
CDS TCA 72 bp ATTGTTTTAGAAAGCCCCATACTCACACAAGAAACCTaGTTTCTCTACTGGGACTGGCCTCAAGCTGGCACG +
Preference number: 6 (lower is better)
Translates to: IVLESPILTQET*FLYWDWPQAGT
Trigger: CGTGCCAGCTTGAGGCCAGTCCCAGTAGAGAAATCAGGTTTCTTGTGTGAGTATGGGGCTTTCTAAAACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477361.1
ENST00000491441.1
CDS CCA 72 bp CAACCAGATGATCCTCAGTTTCCTAGTTCTGAGAAATaGGCAGAAGAATTCTTCCTCCCTTACAGGGTCATT +
Preference number: 6 (lower is better)
Translates to: QPDDPQFPSSEK*AEEFFLPYRVI
Trigger: AATGACCCTGTAAGGGAGGAAGAATTCTTCTGCCCATTTCTCAGAACTAGGAAACTGAGGATCATCTGGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477361.1
ENST00000491441.1
CDS TCA 72 bp CCCCACCAAACCATTGCCATTGTTGCTAGCTTGAACTaGCTAGTCTTCATCTTCCAATTGAGTTCCAATTTC +
Preference number: 6 (lower is better)
Translates to: PHQTIAIVASLN*LVFIFQLSSNF
Trigger: GAAATTGGAACTCAATTGGAAGATGAAGACTAGTCAGTTCAAGCTAGCAACAATGGCAATGGTTTGGTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477361.1
CDS TCA 72 bp AAGTGGCCCCAATGTCAAGAAGTTATCCACCATAGGTaGGTAAATATTCAGATGCCATTTAGGCTCACAACA +
Preference number: 6 (lower is better)
Translates to: KWPQCQEVIHHR*VNIQMPFRLTT
Trigger: TGTTGTGAGCCTAAATGGCATCTGAATATTTACTCACCTATGGTGGATAACTTCTTGACATTGGGGCCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477361.1
CDS CCA 72 bp TTCTTTCATACAAATATTGTGGAGGTTTCCAGTAGATaGGCAACCCTTCCTATTATAAAAGGGTGGAAGCTT +
Preference number: 6 (lower is better)
Translates to: FFHTNIVEVSSR*ATLPIIKGWKL
Trigger: AAGCTTCCACCCTTTTATAATAGGAAGGGTTGCCCATCTACTGGAAACCTCCACAATATTTGTATGAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477361.1