Pregenerated sensors for NCKAP5-IT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000232474

Ensembl transcript IDs: ENST00000416437.1

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 72 bp	GAAATTGAAAGCTGTCACCAAATCCTGTTATCTGTCTaGATAGAAAAGTGCTCAACAAAAACACTGATAGCG	+
Preference number: 6 (lower is better) Translates to: EIESCHQILLSV*IEKCSTKTLIA Trigger: CGCTATCAGTGTTTTTGTTGAGCACTTTTCTATCCAGACAGATAACAGGATTTGGTGACAGCTTTCAATTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000416437.1
CDS CAA 72 bp	TTCACATGGGAAGAATTAGTGAGTTATTTTGCAGAGTaGGGCCAGTTTTACAGGCCAATAAATAATGAGCTA	+
Preference number: 6 (lower is better) Translates to: FTWEELVSYFAE*GQFYRPINNEL Trigger: TAGCTCATTATTTATTGGCCTGTAAAACTGGCCCAACTCTGCAAAATAACTCACTAATTCTTCCCATGTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000416437.1
CDS CAA 72 bp	ATAAATCACAGTCAGGGACCAGCCTACACAGAGAAATaGTATACCTACAAAAGTTTTAGCAGTAATGAAATT	+
Preference number: 6 (lower is better) Translates to: INHSQGPAYTEK*YTYKSFSSNEI Trigger: AATTTCATTACTGCTAAAACTTTTGTAGGTATACAATTTCTCTGTGTAGGCTGGTCCCTGACTGTGATTTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000416437.1

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