RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NCKAP5 (Homo sapiens)

Ensembl gene IDs: ENSG00000176771

Ensembl transcript IDs: ENST00000317721.10, ENST00000358991.4, ENST00000405974.7, ENST00000409213.5, ENST00000409261.6, ENST00000427594.5, ENST00000473859.1, ENST00000639875.1, ENST00000640590.1

Found 1048 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGAGCAAGGCACTCAGGAGAGCCAGCCTCTGAGACAGGTCAAAGTTaGCGAACAGTCAGACATGGGAACAAGTGCAGAAGAGGAGAAGAG +
Preference number: 1 (lower is better)
Translates to: GARHSGEPASETGQS*RTVRHGNKCRRGEE
Trigger: CTCTTCTCCTCTTCTGCACTTGTTCCCATGTCTGACTGTTCGTCAACTTTGACCTGTCTCAGAGGCTGGCTCTCCTGAGTGCCTTGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427594.5
3UTR TCA 90 bp GTCTGGAAGGAAAAACTGGTATTGGGAATAGAATTCGGTCATTTCTaGTACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACCC +
Preference number: 1 (lower is better)
Translates to: VWKEKLVLGIEFGHF*YNVTLPISVHTSGP
Trigger: GGGTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAATACCAGTTTTTCCTTCCAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
3UTR GCA 90 bp CTATCTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTaGTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTAT +
Preference number: 1 (lower is better)
Translates to: LSLLPCQRNKLWWVA*CEFDKEGSGTAIVY
Trigger: ATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
3UTR TCA 90 bp GTGTCCACACTTCAGGACCCTTTTCATTTTTCAGCAGAAGCAGAATaGCACTTATTACTATCACCTGAATCTCTGGCAACGAATCTGAAA +
Preference number: 1 (lower is better)
Translates to: VSTLQDPFHFSAEAE*HLLLSPESLATNLK
Trigger: TTTCAGATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTGAAAAATGAAAAGGGTCCTGAAGTGTGGACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
3UTR TCA 90 bp CAGCTCACTAAGGGAAGAGATGTCCTTTATACATCATTTGAACCTTaGCTGGCACAGGAAGAGAAGCTATCATATAAAGAATCACTCAAA +
Preference number: 1 (lower is better)
Translates to: QLTKGRDVLYTSFEP*LAQEEKLSYKESLK
Trigger: TTTGAGTGATTCTTTATATGATAGCTTCTCTTCCTGTGCCAGTCAAGGTTCAAATGATGTATAAAGGACATCTCTTCCCTTAGTGAGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
3UTR CCA 90 bp TCACTAAGGGAAGAGATGTCCTTTATACATCATTTGAACCTTGACTaGCACAGGAAGAGAAGCTATCATATAAAGAATCACTCAAAGATT +
Preference number: 1 (lower is better)
Translates to: SLREEMSFIHHLNLD*HRKRSYHIKNHSKI
Trigger: AATCTTTGAGTGATTCTTTATATGATAGCTTCTCTTCCTGTGCCAGTCAAGGTTCAAATGATGTATAAAGGACATCTCTTCCCTTAGTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
3UTR-3UTR CCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGCATTTGAACCTTGACTaGCACAGGAAGAGAAGCTAT +
Preference number: 2 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMHLNLD*HRKRSY
Trigger: ATAGCTTCTCTTCCTGTGCCAGTCAAGGTTCAAATG...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
3UTR-3UTR TCA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAATACCCCAGGCCTATCTaGACTACTCAAAGATGTCTC +
Preference number: 2 (lower is better)
Translates to: PCQRNKLWWVACCEFDKEYPRPI*TTQRCL
Trigger: GAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTA...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
3UTR-3UTR TCA 90 bp AATCAACAGAAAATTGCCCTCTGTATTCATCAGGAGGAGCAAGGCACTCAGGAGGAGACAGGTCAAAGTTaGCGAACAGTCAGACATGGG +
Preference number: 2 (lower is better)
Translates to: NQQKIALCIHQEEQGTQEETGQS*RTVRHG
Trigger: CCCATGTCTGACTGTTCGTCAACTTTGACCTGTCTC...CTCCTGAGTGCCTTGCTCCTCCTGATGAATACAGAGGGCAATTTTCTGTTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427594.5
3UTR-3UTR GCA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACCTCTGGTGGGTTGCCTaGTGTGAATTTGACAAGGAA +
Preference number: 2 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDLWWVA*CEFDKE
Trigger: TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAG...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
3UTR-3UTR TCA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACTACCCCAGGCCTATCTaGACTACTCAAAGATGTCTC +
Preference number: 2 (lower is better)
Translates to: RFTECTHKQFEDQDNELHYPRPI*TTQRCL
Trigger: GAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTA...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
3UTR-3UTR TCA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACTACCCACAAACAATTTaGGGACCAGGACAACGAACT +
Preference number: 2 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDYPQTI*GPGQRT
Trigger: AGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTA...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
3UTR CAA 90 bp TTGGCAGGCCCTGTTGTAGGTTTACAGAGTGTACCCACAAACAATTaGAGGACCAGGACAACGAACTTCACAAAAACTTCAGTTGGGATT +
Preference number: 2 (lower is better)
Translates to: LAGPVVGLQSVPTNN*RTRTTNFTKTSVGI
Trigger: AATCCCAACTGAAGTTTTTGTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACAACAGGGCCTGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
3UTR-3UTR TCA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTTACCCCAGGCCTATCTaGACTACTCAAAGATGTCTC +
Preference number: 2 (lower is better)
Translates to: CRFTECTHKQFEDQDNELYPRPI*TTQRCL
Trigger: GAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTA...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
3UTR-3UTR TCA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACACATCATTTGAACCTTaGCTGGCACAGGAAGAGAAG +
Preference number: 2 (lower is better)
Translates to: RFTECTHKQFEDQDNELHTSFEP*LAQEEK
Trigger: CTTCTCTTCCTGTGCCAGTCAAGGTTCAAATGATGT...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
3UTR-3UTR TCA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACCCTTTATACATCATTTaGACCTTGACTGGCACAGGA +
Preference number: 2 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDPLYII*TLTGTG
Trigger: TCCTGTGCCAGTCAAGGTTCAAATGATGTATAAAGG...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
3UTR-3UTR TCA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACCCTTTATACATCATTTaGACCTTGACTGGCACAGGA +
Preference number: 2 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDPLYII*TLTGTG
Trigger: TCCTGTGCCAGTCAAGGTTCAAATGATGTATAAAGG...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
3UTR-3UTR CCA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACCATTTGAACCTTGACTaGCACAGGAAGAGAAGCTAT +
Preference number: 2 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDHLNLD*HRKRSY
Trigger: ATAGCTTCTCTTCCTGTGCCAGTCAAGGTTCAAATG...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
3UTR-3UTR CCA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACCATTTGAACCTTGACTaGCACAGGAAGAGAAGCTAT +
Preference number: 2 (lower is better)
Translates to: RFTECTHKQFEDQDNELHHLNLD*HRKRSY
Trigger: ATAGCTTCTCTTCCTGTGCCAGTCAAGGTTCAAATG...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
3UTR-3UTR TCA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTTCAAGAGCATGGCACTaGTTCCATTTATTGCTGTCT +
Preference number: 2 (lower is better)
Translates to: CRFTECTHKQFEDQDNELSRAWH*FHLLLS
Trigger: AGACAGCAATAAATGGAATCAGTGCCATGCTCTTGA...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
3UTR-3UTR GCA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACGGAAGGCTCTGGTACTaGAATAGTTTATTGTTATCT +
Preference number: 2 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDGRLWY*NSLLLS
Trigger: AGATAACAATAAACTATTGCAGTACCAGAGCCTTCC...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
3UTR-3UTR CCA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTAGAAATAAGCTCTGGTaGGTTGCCTGCTGTGAATTT +
Preference number: 2 (lower is better)
Translates to: CRFTECTHKQFEDQDNELRNKLW*VACCEF
Trigger: AAATTCACAGCAGGCAACCCACCAGAGCTTATTTCT...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
3UTR-3UTR CCA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCAGAAATAAGCTCTGGTaGGTTGCCTGCTGTGAATTT +
Preference number: 2 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRIRNKLW*VACCEF
Trigger: AAATTCACAGCAGGCAACCCACCAGAGCTTATTTCT...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
3UTR-3UTR CCA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCAGAGAAATAAGCTCTaGTGGGTTGCCTGCTGTGAA +
Preference number: 2 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCQRNKL*WVACCE
Trigger: TTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTG...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
3UTR-3UTR TCA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTACATCATTTGAACCTTaGCTGGCACAGGAAGAGAAG +
Preference number: 2 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCTSFEP*LAQEEK
Trigger: CTTCTCTTCCTGTGCCAGTCAAGGTTCAAATGATGT...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
3UTR-3UTR GCA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACGGAAGGCTCTGGTACTaGAATAGTTTATTGTTATCT +
Preference number: 2 (lower is better)
Translates to: RFTECTHKQFEDQDNELHGRLWY*NSLLLS
Trigger: AGATAACAATAAACTATTGCAGTACCAGAGCCTTCC...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
3UTR-3UTR CCA 90 bp ATAAATCCTAAAGTGGACAACATCAGAGCCAAGAGCAATCTTGGTTATATGTTCACGAACAGTCAGACATaGGAACAAGTGCAGAAGAGG +
Preference number: 2 (lower is better)
Translates to: INPKVDNIRAKSNLGYMFTNSQT*EQVQKR
Trigger: CCTCTTCTGCACTTGTTCCCATGTCTGACTGTTCGT...GAACATATAACCAAGATTGCTCTTGGCTCTGATGTTGTCCACTTTAGGATTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427594.5
3UTR CAA 90 bp CAGGAAGAGAAGCTATCATATAAAGAATCACTCAAAGATTCCAAGTaGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTCA +
Preference number: 2 (lower is better)
Translates to: QEEKLSYKESLKDSK*STPGLSELLKDVSS
Trigger: TGAAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTTTATATGATAGCTTCTCTTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000639875.1
3UTR-3UTR TCA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGCCTTTATACATCATTTaGACCTTGACTGGCACAGGA +
Preference number: 2 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQAPLYII*TLTGTG
Trigger: TCCTGTGCCAGTCAAGGTTCAAATGATGTATAAAGG...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
3UTR-3UTR TCA 90 bp CAAGACCTCAACATAAAACTCATTGTTAGAATCTTCAAGAAGGCCTGGTTACAAAGGCCCCAATTTTTATaGAAAGTCTCAGGCAGAAAT +
Preference number: 2 (lower is better)
Translates to: QDLNIKLIVRIFKKAWLQRPQFL*KVSGRN
Trigger: ATTTCTGCCTGAGACTTTTCATAAAAATTGGGGCCT...TTGTAACCAGGCCTTCTTGAAGATTCTAACAATGAGTTTTATGTTGAGGTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427594.5
3UTR-3UTR CCA 90 bp CAAGACCTCAACATAAAACTCATTGTTAGAATCTTCAAGAAGGCCTGGTTACAACTACATAATTGGTTTTaGCTTTCCTTTGCATTGCTT +
Preference number: 2 (lower is better)
Translates to: QDLNIKLIVRIFKKAWLQLHNWF*LSFALL
Trigger: AAGCAATGCAAAGGAAAGCCAAAACCAATTATGTAG...TTGTAACCAGGCCTTCTTGAAGATTCTAACAATGAGTTTTATGTTGAGGTCTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427594.5
3UTR-3UTR CAA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACGAACCCTCCGATTTTTaGGCAGGCCCTGTTGTAGGT +
Preference number: 3 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDEPSDF*AGPVVG
Trigger: ACCTACAACAGGGCCTGCCAAAAAATCGGAGGGTTC...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
3UTR-3UTR CAA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGCTCAAAGATTCCAAGTaGTCTACCCCAGGCCTATCT +
Preference number: 3 (lower is better)
Translates to: LYCPVREISSGGLPAVNLLKDSK*STPGLS
Trigger: AGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAG...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
3UTR-3UTR CAA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACCTCAAAGATTCCAAGTaGTCTACCCCAGGCCTATCT +
Preference number: 3 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDLKDSK*STPGLS
Trigger: AGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAG...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
3UTR-3UTR CAA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAATCCTTTATACATCATTaGAACCTTGACTGGCACAGG +
Preference number: 3 (lower is better)
Translates to: PCQRNKLWWVACCEFDKESFIHH*NLDWHR
Trigger: CCTGTGCCAGTCAAGGTTCAAATGATGTATAAAGGA...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
3UTR-3UTR CAA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCTCAAAGATTCCAAGTaGTCTACCCCAGGCCTATCT +
Preference number: 3 (lower is better)
Translates to: CRFTECTHKQFEDQDNELLKDSK*STPGLS
Trigger: AGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAG...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
3UTR-3UTR CAA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACTCCTTTATACATCATTaGAACCTTGACTGGCACAGG +
Preference number: 3 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDSFIHH*NLDWHR
Trigger: CCTGTGCCAGTCAAGGTTCAAATGATGTATAAAGGA...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
3UTR-3UTR CAA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTTTCTGTCCTTCAACCTaGTTCAGAGAGTTCTTCTCT +
Preference number: 3 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLFCPST*FREFFS
Trigger: AGAGAAGAACTCTCTGAACAAGGTTGAAGGACAGAA...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000639875.1
3UTR-3UTR CAA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCTTCTGTCCTTCAACCTaGTTCAGAGAGTTCTTCTCT +
Preference number: 3 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRIFCPST*FREFFS
Trigger: AGAGAAGAACTCTCTGAACAAGGTTGAAGGACAGAA...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
3UTR-3UTR CAA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCATTCTGTCCTTCAACCTaGTTCAGAGAGTTCTTCTCT +
Preference number: 3 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSFCPST*FREFFS
Trigger: AGAGAAGAACTCTCTGAACAAGGTTGAAGGACAGAA...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000639875.1
3UTR-3UTR CAA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTTTGCCTGCTGTGAATTaGACAAGGAAGGCTCTGGTA +
Preference number: 3 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCLPAVN*TRKALV
Trigger: TACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAA...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
3UTR-3UTR CAA 90 bp ATGTTGCTTTACCATCTTCAACTTCTGGTAGATTCACACAGAGCAGCAGATGAGTTGTCCAAAGGTCAATaGACAGCTTTTCTCATCTTG +
Preference number: 3 (lower is better)
Translates to: MLLYHLQLLVDSHRAADELSKGQ*TAFLIL
Trigger: CAAGATGAGAAAAGCTGTCAATTGACCTTTGGACAA...CTCATCTGCTGCTCTGTGTGAATCTACCAGAAGTTGAAGATGGTAAAGCAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427594.5
3UTR-3UTR CAA 90 bp AGAAATAAGACTAGTAGTTACCAGGGGCTTGGGAGGGAAATGAGAACAAAGAGGATCCTTGAACCAATGTaGCTTTACCATCTTCAACTT +
Preference number: 3 (lower is better)
Translates to: RNKTSSYQGLGREMRTKRILEPM*LYHLQL
Trigger: AAGTTGAAGATGGTAAAGCAACATTGGTTCAAGGAT...CCTCTTTGTTCTCATTTCCCTCCCAAGCCCCTGGTAACTACTAGTCTTATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427594.5
3UTR-3UTR CAA 90 bp ATAAATCCTAAAGTGGACAACATCAGAGCCAAGAGCAATCTTGGTTATATGTTCTATCTTAACTTCCTTTaGCCAGCCAAGTTCCCCAGT +
Preference number: 3 (lower is better)
Translates to: INPKVDNIRAKSNLGYMFYLNFL*PAKFPS
Trigger: ACTGGGGAACTTGGCTGGCAAAAGGAAGTTAAGATA...GAACATATAACCAAGATTGCTCTTGGCTCTGATGTTGTCCACTTTAGGATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427594.5
3UTR TCA 72 bp GAAAAACTGGTATTGGGAATAGAATTCGGTCATTTCTaGTACAATGTCACACTCCCAATCAGTGTCCACACT +
Preference number: 3 (lower is better)
Translates to: EKLVLGIEFGHF*YNVTLPISVHT
Trigger: AGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAATACCAGTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
3UTR-3UTR CAA 90 bp TGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATTTCTGTCCTTCAACCTaGTTCAGAGAGTTCTTCTCT +
Preference number: 3 (lower is better)
Translates to: CEFDKEGSGTAIVYCYLYFCPST*FREFFS
Trigger: AGAGAAGAACTCTCTGAACAAGGTTGAAGGACAGAA...ATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
3UTR-3UTR CAA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTTTCTGTCCTTCAACCTaGTTCAGAGAGTTCTTCTCT +
Preference number: 3 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLFCPST*FREFFS
Trigger: AGAGAAGAACTCTCTGAACAAGGTTGAAGGACAGAA...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
3UTR CCA 72 bp GAAGAGATGTCCTTTATACATCATTTGAACCTTGACTaGCACAGGAAGAGAAGCTATCATATAAAGAATCAC +
Preference number: 3 (lower is better)
Translates to: EEMSFIHHLNLD*HRKRSYHIKNH
Trigger: GTGATTCTTTATATGATAGCTTCTCTTCCTGTGCCAGTCAAGGTTCAAATGATGTATAAAGGACATCTCTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
3UTR TCA 72 bp TTCAGCAGAAGCAGAATGACACTTATTACTATCACCTaGATCTCTGGCAACGAATCTGAAATTACACTAAAA +
Preference number: 3 (lower is better)
Translates to: FSRSRMTLITIT*ISGNESEITLK
Trigger: TTTTAGTGTAATTTCAGATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR TCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGAGAGATGACCAGGGATaGCAGCCCCCAAGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMRDDQG*QPPSQG
Trigger: GCCCTGGCTTGGGGGCTGTCATCCCTGGTCATCTCT...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCGCAGGGAGACGGACCTaGCTGGAGGGGGCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPAGRRT*LEGAEG
Trigger: CCCCTCCGCCCCCTCCAGGCAGGTCCGTCTCCCTGC...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGCTGGGTGCCTTGTCCTaGGTCCCGGTGGCAGCAACT +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMLGALS*VPVAAT
Trigger: AGTTGCTGCCACCGGGACCCAGGACAAGGCACCCAG...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGTCCCATGCTGACTGCTaGAGCTGCCTGAGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMSHADC*SCLSSP
Trigger: TGGGGAGCTCAGGCAGCTTCAGCAGTCAGCATGGGA...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGGCGGCTGGGAAGTCCTaGCGTGAATGCGGAGCAAGT +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMAAGKS*RECGAS
Trigger: ACTTGCTCCGCATTCACGGCAGGACTTCCCAGCCGC...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACGCAGGGAGACGGACCTaGCTGGAGGGGGCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: RFTECTHKQFEDQDNELHAGRRT*LEGAEG
Trigger: CCCCTCCGCCCCCTCCAGGCAGGTCCGTCTCCCTGC...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGGGAGACGGACCTGCCTaGAGGGGGCGGAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LYCPVREISSGGLPAVNLGDGPA*RGRRGR
Trigger: CCTTCCCCTCCGCCCCCTCCAGGCAGGTCCGTCTCC...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGCGTACACATTCTGGGTaGCTTGTCCTGGGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMRTHSG*LVLGPG
Trigger: ACCGGGACCCAGGACAAGGCACCCAGAATGTGTACG...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGGGCGAGGAGAGGTTTTaGGGACACCTCTCTTCGGAG +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMGEERF*GHLSSE
Trigger: CTCCGAAGAGAGGTGTCCCCAAAACCTCTCCTCGCC...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGTTCACTCCCCCAGTCTaGAAGCGGCTGGCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMFTPPV*KRLACH
Trigger: ATGGCAAGCCAGCCGCTTCCAGACTGGGGGAGTGAA...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000640590.1
CDS-3UTR GCA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGGGGTGGGTGGGCAACTaGGGCGGTCACTGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: LYCPVREISSGGLPAVNLGWVGN*GGHCLV
Trigger: AACCAGGCAGTGACCGCCGCAGTTGCCCACCCACCC...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACATGCGGCCATGGCCTTaGCCCTGTGGGCCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: RFTECTHKQFEDQDNELHMRPWP*PCGPLS
Trigger: GGAGAGGGGCCCACAGGGCCAAGGCCATGGCCGCAT...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCCCCAGTCCCTCCTGCTaGGCATCCTGGAGCTGTGCG +
Preference number: 4 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPPSPSC*ASWSCA
Trigger: CGCACAGCTCCAGGATGCCCAGCAGGAGGGACTGGG...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGGTGAATAGTCATAGCTaGGCCTGGCCAGCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMVNSHS*AWPAGR
Trigger: TCTCCCTGCTGGCCAGGCCCAGCTATGACTATTCAC...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGCCCTGGTTTCGGACTTaGTGGATGAAGGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMPWFRT*WMKVLV
Trigger: CACCAGCACCTTCATCCACCAAGTCCGAAACCAGGG...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGCAGTCTGGAAGCGGCTaGCTTGCCATTGGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMQSGSG*LAIGSS
Trigger: TGAAGACCCAATGGCAAGCCAGCCGCTTCCAGACTG...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000640590.1
CDS-3UTR TCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGGGGTCGGATGTGGAATaGACAATGGCGCTATCTGCA +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMGSDVE*TMALSA
Trigger: TGCAGATAGCGCCATTGTTCATTCCACATCCGACCC...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR GCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCATTCCCGGAGGAGGGGTaGCCCGAGGGCCTCCCAACA +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSFPEEG*PEGLPT
Trigger: TGTTGGGAGGCCCTCGGGGCACCCCTCCTCCGGGAA...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACATGGCCTTGGCCCTGTaGGCCCCTCTCCCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDMALAL*APLPLY
Trigger: GTACAGAGGGAGAGGGGCCCACAGGGCCAAGGCCAT...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTAGAGCCATGCGGCCATaGCCTTGGCCCTGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLRAMRP*PWPCGP
Trigger: GGGCCCACAGGGCCAAGGCCATGGCCGCATGGCTCT...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAATCCTGCTGGGCATCCTaGAGCTGTGCGGAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: PCQRNKLWWVACCEFDKESCWAS*SCAEVG
Trigger: CCCAACTTCCGCACAGCTCCAGGATGCCCAGCAGGA...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACCTGGGGCACTCTCCCTaGGTGAAGGCCTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDLGHSP*VKACWS
Trigger: AGACCAGCAGGCCTTCACCCAGGGAGAGTGCCCCAG...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACGGCAGTCTGTTGGGGTaGGTGGGCAACTGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: RFTECTHKQFEDQDNELHGSLLG*VGNCGG
Trigger: ACCGCCGCAGTTGCCCACCCACCCCAACAGACTGCC...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGCTATCTGCAGGGCGCTaGCCGTCTGTGGAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LYCPVREISSGGLPAVNLLSAGR*PSVEEG
Trigger: GCCTTCCTCCACAGACGGCCAGCGCCCTGCAGATAG...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACTGTCCTGGGTCCCGGTaGCAGCAACTTCACTCCCCC +
Preference number: 4 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDCPGSR*QQLHSP
Trigger: GGGGGAGTGAAGTTGCTGCCACCGGGACCCAGGACA...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CCA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCTGTCCTGGGTCCCGGTaGCAGCAACTTCACTCCCCC +
Preference number: 4 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPCPGSR*QQLHSP
Trigger: GGGGGAGTGAAGTTGCTGCCACCGGGACCCAGGACA...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CCA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACCTGGGTGCCTTGTCCTaGGTCCCGGTGGCAGCAACT +
Preference number: 4 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDLGALS*VPVAAT
Trigger: AGTTGCTGCCACCGGGACCCAGGACAAGGCACCCAG...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGTGTTGCTCCTCAAGCTaGGTCAGCAGATGCTCAATG +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMCCSSS*VSRCSM
Trigger: CATTGAGCATCTGCTGACTCAGCTTGAGGAGCAACA...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGAACCGCTTCTCGCTTTaGAGACGTAAGTGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMNRFSL*RRKCLS
Trigger: GGAGAGACACTTACGTCTTCAAAGCGAGAAGCGGTT...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGATGATTGCCTTTTCCTaGGGTTCTTCCCATCGTGCC +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMMIAFS*GSSHRA
Trigger: GGCACGATGGGAAGAACCTCAGGAAAAGGCAATCAT...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGTTCTTTCACCCGCTGTaGTCTCCATGCTTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMFFHPL*SPCLLD
Trigger: ATCCAGCAAGCATGGAGATCACAGCGGGTGAAAGAA...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGTCCCATGCTGACTGCTaGAGCTGCCTGAGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LYCPVREISSGGLPAVNLSHADC*SCLSSP
Trigger: TGGGGAGCTCAGGCAGCTTCAGCAGTCAGCATGGGA...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCCTTGGGCTCCCATGCTaGCTGCTGAAGCTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPLGLPC*LLKLPE
Trigger: CTCAGGCAGCTTCAGCAGTCAGCATGGGAGCCCAAG...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGATGAGACAGGAGCCCTaGGAACTGCCCTTTAACACA +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMMRQEP*ELPFNT
Trigger: TGTGTTAAAGGGCAGTTCTCAGGGCTCCTGTCTCAT...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp GCAGAAGAGGAGAAGAGCTCTGTGCTGATGCTTGTCCAAAGGTCAATTGACAGCAGGAGAGCCAGCCTCTaGGACAGGTCAAAGTTGACG +
Preference number: 4 (lower is better)
Translates to: AEEEKSSVLMLVQRSIDSRRASL*DRSKLT
Trigger: CGTCAACTTTGACCTGTCTCAGAGGCTGGCTCTCCT...GCTGTCAATTGACCTTTGGACAAGCATCAGCACAGAGCTCTTCTCCTCTTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427594.5
CDS-3UTR GCA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACAAGTTTGCGGAGACTTaGTCCCTGGGCTGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDKFAET*SLGCGS
Trigger: GGAGCCGCAGCCCAGGGAGCAAGTCTCCGCAAACTT...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCAAGTTTGCGGAGACTTaGTCCCTGGGCTGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPKFAET*SLGCGS
Trigger: GGAGCCGCAGCCCAGGGAGCAAGTCTCCGCAAACTT...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGCACTGGAGTACTCGCTaGAGGTGCTTGAAAGAGACA +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMHWSTR*RCLKET
Trigger: TGTCTCTTTCAAGCACCTGCAGCGAGTACTCCAGTG...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCGGGTGGGTGGGCAACTaGGGCGGTCACTGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRIGWVGN*GGHCLV
Trigger: AACCAGGCAGTGACCGCCGCAGTTGCCCACCCACCC...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGGAGGTGGGCTTTGTTTaGACTTGGCCCTTTTCCACA +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMEVGFV*TWPFST
Trigger: TGTGGAAAAGGGCCAAGTGCAAACAAAGCCCACCTC...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAACGTACACATTCTGGGTaGCTTGTCCTGGGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: PCQRNKLWWVACCEFDKERTHSG*LVLGPG
Trigger: ACCGGGACCCAGGACAAGGCACCCAGAATGTGTACG...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGCTGTTTCTTCCATCCTaGAGAACTGCTGCTGCAAGC +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMLFLPS*RTAAAS
Trigger: GCTTGCAGCAGCAGTTCTCCAGGATGGAAGAAACAG...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CCA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCTCCTGCTGGGCATCCTaGAGCTGTGCGGAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPSCWAS*SCAEVG
Trigger: CCCAACTTCCGCACAGCTCCAGGATGCCCAGCAGGA...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAAAGTGTTCATCCCTCGTaGGGGGCTCTCCACTGTCAC +
Preference number: 4 (lower is better)
Translates to: PCQRNKLWWVACCEFDKESVHPS*GALHCH
Trigger: GTGACAGTGGAGAGCCCCCCACGAGGGATGAACACT...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGCAGCGGGGATTTGAATaGGGTCCTTGCTGTTTCACT +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMQRGFE*GPCCFT
Trigger: AGTGAAACAGCAAGGACCCCATTCAAATCCCCGCTG...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAAGGGGTCCCAAGTGTTTaGCGAGGAGAGGTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: PCQRNKLWWVACCEFDKEGVPSV*RGEVLG
Trigger: CCCCAAAACCTCTCCTCGCCAAACACTTGGGACCCC...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACCTGGGGCACTCTCCCTaGGTGAAGGCCTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: RFTECTHKQFEDQDNELHLGHSP*VKACWS
Trigger: AGACCAGCAGGCCTTCACCCAGGGAGAGTGCCCCAG...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTGGCAGTCTGTTGGGGTaGGTGGGCAACTGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: CRFTECTHKQFEDQDNELGSLLG*VGNCGG
Trigger: ACCGCCGCAGTTGCCCACCCACCCCAACAGACTGCC...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAAGCAGAAAGGGCTGACTaGAGAGGCAGGAGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: PCQRNKLWWVACCEFDKEAERAD*RGRRGS
Trigger: TGAGCCTCTCCTGCCTCTCCAGTCAGCCCTTTCTGC...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGGGGTTTGGGCTCTCATaGAAGAAACTGCAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMGFGLS*KKLQKG
Trigger: CCCTTTCTGCAGTTTCTTCCATGAGAGCCCAAACCC...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGGCATGTCTGAGGCCTTaGCTCTGCTTCATTCTGCTT +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMACLRP*LCFILL
Trigger: AAGCAGAATGAAGCAGAGCCAAGGCCTCAGACATGC...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000640590.1
CDS-3UTR TCA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGCAGACTCGGTTTTCCTaGACATCCACAGCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LYCPVREISSGGLPAVNLQTRFS*TSTAAG
Trigger: CCCAGCCGCTGTGGATGTTCAGGAAAACCGAGTCTG...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAGAGATGACCAGGGATaGCAGCCCCCAAGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSRDDQG*QPPSQG
Trigger: GCCCTGGCTTGGGGGCTGTCATCCCTGGTCATCTCT...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR TCA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCGCAGGGCATCGGGTTTaGATGACTGCTTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPAGHRV*MTASGE
Trigger: CTCCCCAGAAGCAGTCATTCAAACCCGATGCCCTGC...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGCTCCTGAGTGTGTACTaGAGCTGTGGCTGCGGGCTT +
Preference number: 4 (lower is better)
Translates to: LYCPVREISSGGLPAVNLLLSVY*SCGCGL
Trigger: AAGCCCGCAGCCACAGCTTCAGTACACACTCAGGAG...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACAAAGTGCTTGGATGCTaGGTCCTCCCTGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDKVLGC*VLPGLC
Trigger: GCAGAGCCCAGGGAGGACTCAGCATCCAAGCACTTT...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGTTTGTGAGATGGAGATaGGGAGGAACCCTCCGATTT +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMFVRWR*GGTLRF
Trigger: AAATCGGAGGGTTCCTCCTCATCTCCATCTCACAAA...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR GCA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGTCTGAGTGCGGACTTTaGCTGACCCTTCGATGGGGG +
Preference number: 4 (lower is better)
Translates to: LYCPVREISSGGLPAVNLSECGL*LTLRWG
Trigger: CCCCCATCGAAGGGTCAGGCAAAGTCCGCACTCAGA...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGTTCCCGGAGGAGGGGTaGCCCGAGGGCCTCCCAACA +
Preference number: 4 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQAFPEEG*PEGLPT
Trigger: TGTTGGGAGGCCCTCGGGGCACCCCTCCTCCGGGAA...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACCCCTGGGTGAAGGCCTaGTGGTCTTCCTTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDPWVKA*WSSFPG
Trigger: ACCTGGAAAGGAAGACCAGCAGGCCTTCACCCAGGG...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCAACAATGGCGCTATCTaGAGGGCGCTGGCCGTCTGT +
Preference number: 4 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPNNGAI*RALAVC
Trigger: ACAGACGGCCAGCGCCCTGCAGATAGCGCCATTGTT...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR GCA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACAACAATGGCGCTATCTaGAGGGCGCTGGCCGTCTGT +
Preference number: 4 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDNNGAI*RALAVC
Trigger: ACAGACGGCCAGCGCCCTGCAGATAGCGCCATTGTT...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR GCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGCTCTGGTGGGTTGCCTaGTGTGAATTTGACAAGGAA +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMLWWVA*CEFDKE
Trigger: TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAG...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTATGCGGCCATGGCCTTaGCCCTGTGGGCCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCMRPWP*PCGPLS
Trigger: GGAGAGGGGCCCACAGGGCCAAGGCCATGGCCGCAT...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTAGAGCCATGCGGCCATaGCCTTGGCCCTGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCRAMRP*PWPCGP
Trigger: GGGCCCACAGGGCCAAGGCCATGGCCGCATGGCTCT...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAGTGTTCATCCCTCGTaGGGGGCTCTCCACTGTCAC +
Preference number: 4 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDSVHPS*GALHCH
Trigger: GTGACAGTGGAGAGCCCCCCACGAGGGATGAACACT...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAAGTGAATAGTCATAGCTaGGCCTGGCCAGCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: PCQRNKLWWVACCEFDKEVNSHS*AWPAGR
Trigger: TCTCCCTGCTGGCCAGGCCCAGCTATGACTATTCAC...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGTGGTTTCGGACTTGGTaGATGAAGGTGCTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMWFRTW*MKVLVN
Trigger: ATTCACCAGCACCTTCATCCACCAAGTCCGAAACCA...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGATTTCCAGTGGCTCATaGGTTGAAGGAGAGATCCTG +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMISSGS*VEGEIL
Trigger: CAGGATCTCTCCTTCAACCCATGAGCCACTGGAAAT...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTGCGGCGGTCACTGCCTaGTTCCCCAAGTACAGCCAC +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCAAVTA*FPKYSH
Trigger: GTGGCTGTACTTGGGGAACCAGGCAGTGACCGCCGC...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGTGTTTCAAAAGTGCTTaGATGCTGAGTCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMCFKSA*MLSPPW
Trigger: CCAGGGAGGACTCAGCATCCAAGCACTTTTGAAACA...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCGCAGAAAGGGCTGACTaGAGAGGCAGGAGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPAERAD*RGRRGS
Trigger: TGAGCCTCTCCTGCCTCTCCAGTCAGCCCTTTCTGC...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCTATCTGCAGGGCGCTaGCCGTCTGTGGAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: CRFTECTHKQFEDQDNELLSAGR*PSVEEG
Trigger: GCCTTCCTCCACAGACGGCCAGCGCCCTGCAGATAG...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCACTATCTGCAGGGCGCTaGCCGTCTGTGGAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSLSAGR*PSVEEG
Trigger: GCCTTCCTCCACAGACGGCCAGCGCCCTGCAGATAG...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000639875.1
CDS-3UTR CCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTCTATCTGCAGGGCGCTaGCCGTCTGTGGAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLLSAGR*PSVEEG
Trigger: GCCTTCCTCCACAGACGGCCAGCGCCCTGCAGATAG...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000639875.1
CDS-3UTR CCA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACCTGAGGAAGCTGGTTTaGGGAGGCGGCTCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDLRKLV*GGGSEE
Trigger: CTCTTCAGAGCCGCCTCCCCAAACCAGCTTCCTCAG...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCCTGAGGAAGCTGGTTTaGGGAGGCGGCTCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPLRKLV*GGGSEE
Trigger: CTCTTCAGAGCCGCCTCCCCAAACCAGCTTCCTCAG...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCATGTCCTGGGTCCCGGTaGCAGCAACTTCACTCCCCC +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSCPGSR*QQLHSP
Trigger: GGGGGAGTGAAGTTGCTGCCACCGGGACCCAGGACA...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CCA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTTGTCCTGGGTCCCGGTaGCAGCAACTTCACTCCCCC +
Preference number: 4 (lower is better)
Translates to: CRFTECTHKQFEDQDNELCPGSR*QQLHSP
Trigger: GGGGGAGTGAAGTTGCTGCCACCGGGACCCAGGACA...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTCTGGGTGCCTTGTCCTaGGTCCCGGTGGCAGCAACT +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLLGALS*VPVAAT
Trigger: AGTTGCTGCCACCGGGACCCAGGACAAGGCACCCAG...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR TCA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAACTCGCTGCAGGTGCTTaGAAGAGACAGTTCACTGCT +
Preference number: 4 (lower is better)
Translates to: PCQRNKLWWVACCEFDKELAAGA*KRQFTA
Trigger: AGCAGTGAACTGTCTCTTTCAAGCACCTGCAGCGAG...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGTTCCTTGGGATAAACTaGGGATGTGCCTTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMFLGIN*GCAFQK
Trigger: TTTCTGGAAGGCACATCCTCAGTTTATCCCAAGGAA...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACCAGTGGCTCATGGGTTaGAGGAGAGATCCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDQWLMG*RRDPGS
Trigger: ACTCCCAGGATCTCTCCTTCAACCCATGAGCCACTG...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACCGGTGGAACTTTTCCTaGGCAGCTGGGGAGACTTCA +
Preference number: 4 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDRWNFS*AAGETS
Trigger: TGAAGTCTCCCCAGCTGCTCAGGAAAAGTTCCACCG...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTCTTGGGCTCCCATGCTaGCTGCTGAAGCTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCLGLPC*LLKLPE
Trigger: CTCAGGCAGCTTCAGCAGTCAGCATGGGAGCCCAAG...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACCCTTTCCAGGTGGGATaGGGAGTCCCTCAGACTTTG +
Preference number: 4 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDPFQVG*GVPQTL
Trigger: CAAAGTCTGAGGGACTCCTCATCCCACCTGGAAAGG...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAAGGGTCGGATGTGGAATaGACAATGGCGCTATCTGCA +
Preference number: 4 (lower is better)
Translates to: PCQRNKLWWVACCEFDKEGSDVE*TMALSA
Trigger: TGCAGATAGCGCCATTGTTCATTCCACATCCGACCC...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR GCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTAAGTTTGCGGAGACTTaGTCCCTGGGCTGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCKFAET*SLGCGS
Trigger: GGAGCCGCAGCCCAGGGAGCAAGTCTCCGCAAACTT...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGTTTGCGGAGACTTaGTCCCTGGGCTGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSKFAET*SLGCGS
Trigger: GGAGCCGCAGCCCAGGGAGCAAGTCTCCGCAAACTT...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR GCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAGCGGCTGGGAAGTCCTaGCGTGAATGCGGAGCAAGT +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSAAGKS*RECGAS
Trigger: ACTTGCTCCGCATTCACGGCAGGACTTCCCAGCCGC...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR GCA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCGCGGCTGGGAAGTCCTaGCGTGAATGCGGAGCAAGT +
Preference number: 4 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRIAAGKS*RECGAS
Trigger: ACTTGCTCCGCATTCACGGCAGGACTTCCCAGCCGC...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGGCATCTGAATTCTGTTaGGTTCAGACTCTAGGGTCA +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMASEFC*VQTLGS
Trigger: TGACCCTAGAGTCTGAACGCAACAGAATTCAGATGC...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACTCTGAGTGCGGACTTTaGCTGACCCTTCGATGGGGG +
Preference number: 4 (lower is better)
Translates to: RFTECTHKQFEDQDNELHSECGL*LTLRWG
Trigger: CCCCCATCGAAGGGTCAGGCAAAGTCCGCACTCAGA...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACAACAATGGCGCTATCTaGAGGGCGCTGGCCGTCTGT +
Preference number: 4 (lower is better)
Translates to: RFTECTHKQFEDQDNELHNNGAI*RALAVC
Trigger: ACAGACGGCCAGCGCCCTGCAGATAGCGCCATTGTT...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAATCAGTGTCTGAAAGCTaGAGGTTGAGAGCCATGCGG +
Preference number: 4 (lower is better)
Translates to: PCQRNKLWWVACCEFDKESVSES*RLRAMR
Trigger: CCGCATGGCTCTCAACCTCCAGCTTTCAGACACTGA...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCGGAGACGGACCTGCCTaGAGGGGGCGGAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSGDGPA*RGRRGR
Trigger: CCTTCCCCTCCGCCCCCTCCAGGCAGGTCCGTCTCC...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAATTTCACTGGGGACCCTaGTTTCGGACTTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: PCQRNKLWWVACCEFDKEFHWGP*FRTWWM
Trigger: CATCCACCAAGTCCGAAACCAGGGTCCCCAGTGAAA...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCCTTCGGAGAGACCTTTaGAGGCCCCAGAGCCATTAC +
Preference number: 4 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPLRRDL*RPQSHY
Trigger: GTAATGGCTCTGGGGCCTCCAAAGGTCTCTCCGAAG...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGATTCTTGGAGTCCTCTaGCTTAGACTTGTTCACAGC +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMILGVL*LRLVHS
Trigger: GCTGTGAACAAGTCTAAGCCAGAGGACTCCAAGAAT...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGCAGAAGGGGCCTTGTTaGGAGAGCTTTCCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: LYCPVREISSGGLPAVNLQKGPC*ESFPWK
Trigger: CTTCCACGGAAAGCTCTCCCAACAAGGCCCCTTCTG...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACGGAGACTCTCCAACATaGGAGCAGAAGGGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDGDSPT*EQKGPC
Trigger: ACAAGGCCCCTTCTGCTCCCATGTTGGAGAGTCTCC...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCTCCCGAGTCTGGGAGTaGAAAGGTTCCGATCCCACT +
Preference number: 4 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPSRVWE*KGSDPT
Trigger: AGTGGGATCGGAACCTTTCCACTCCCAGACTCGGGA...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGTCCCGAGTCTGGGAGTaGAAAGGTTCCGATCCCACT +
Preference number: 4 (lower is better)
Translates to: LYCPVREISSGGLPAVNLSRVWE*KGSDPT
Trigger: AGTGGGATCGGAACCTTTCCACTCCCAGACTCGGGA...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAAGCGATTTCCCGAGTCTaGGAGTGGAAAGGTTCCGAT +
Preference number: 4 (lower is better)
Translates to: PCQRNKLWWVACCEFDKEAISRV*EWKGSD
Trigger: ATCGGAACCTTTCCACTCCCAGACTCGGGAAATCGC...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGTCACGTTCAAGGGTTTaGGCTCTCATGGAAGAAACT +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMSRSRV*ALMEET
Trigger: AGTTTCTTCCATGAGAGCCCAAACCCTTGAACGTGA...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACCTGAGGAAGCTGGTTTaGGGAGGCGGCTCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: RFTECTHKQFEDQDNELHLRKLV*GGGSEE
Trigger: CTCTTCAGAGCCGCCTCCCCAAACCAGCTTCCTCAG...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR TCA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTTGGGAAGTCCTGCCGTaGATGCGGAGCAAGTTTGCG +
Preference number: 4 (lower is better)
Translates to: CRFTECTHKQFEDQDNELWEVLP*MRSKFA
Trigger: CGCAAACTTGCTCCGCATTCACGGCAGGACTTCCCA...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTTGGGAAGTCCTGCCGTaGATGCGGAGCAAGTTTGCG +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLWEVLP*MRSKFA
Trigger: CGCAAACTTGCTCCGCATTCACGGCAGGACTTCCCA...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR TCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTGGGAAGTCCTGCCGTaGATGCGGAGCAAGTTTGCG +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCWEVLP*MRSKFA
Trigger: CGCAAACTTGCTCCGCATTCACGGCAGGACTTCCCA...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp GCAGAAGAGGAGAAGAGCTCTGTGCTGATGCTTGTCCAAAGGTCAATTGACAGCTGCAAGCTACGCATCTaGATTCTGTTGCGTTCAGAC +
Preference number: 4 (lower is better)
Translates to: AEEEKSSVLMLVQRSIDSCKLRI*ILLRSD
Trigger: GTCTGAACGCAACAGAATTCAGATGCGTAGCTTGCA...GCTGTCAATTGACCTTTGGACAAGCATCAGCACAGAGCTCTTCTCCTCTTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427594.5
CDS-3UTR TCA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGTCAGCAGCGGGGATTTaGATGGGGTCCTTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: LYCPVREISSGGLPAVNLSAAGI*MGSLLF
Trigger: AAACAGCAAGGACCCCATTCAAATCCCCGCTGCTGA...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACGGGGAGGGCATAGGGTaGGTGAAGATAGGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDGEGIG*VKIGFL
Trigger: CAAAAAGCCTATCTTCACTCACCCTATGCCCTCCCC...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCTCCTGAGTGTGTACTaGAGCTGTGGCTGCGGGCTT +
Preference number: 4 (lower is better)
Translates to: CRFTECTHKQFEDQDNELLLSVY*SCGCGL
Trigger: AAGCCCGCAGCCACAGCTTCAGTACACACTCAGGAG...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAAGTGCTTGGATGCTaGGTCCTCCCTGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSKVLGC*VLPGLC
Trigger: GCAGAGCCCAGGGAGGACTCAGCATCCAAGCACTTT...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACGGGTCGGATGTGGAATaGACAATGGCGCTATCTGCA +
Preference number: 4 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDGSDVE*TMALSA
Trigger: TGCAGATAGCGCCATTGTTCATTCCACATCCGACCC...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR TCA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCTCCCTCTGGCGGTCATaGTGGGGTCGGATGTGGAAT +
Preference number: 4 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRISLWRS*WGRMWN
Trigger: ATTCCACATCCGACCCCATCATGACCGCCAGAGGGA...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR TCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCATCCCTCTGGCGGTCATaGTGGGGTCGGATGTGGAAT +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSSLWRS*WGRMWN
Trigger: ATTCCACATCCGACCCCATCATGACCGCCAGAGGGA...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000639875.1
CDS-3UTR TCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTCCCTCTGGCGGTCATaGTGGGGTCGGATGTGGAAT +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCSLWRS*WGRMWN
Trigger: ATTCCACATCCGACCCCATCATGACCGCCAGAGGGA...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR TCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGTCAAGAGCATGGCACTaGTTCCATTTATTGCTGTCT +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMSRAWH*FHLLLS
Trigger: AGACAGCAATAAATGGAATCAGTGCCATGCTCTTGA...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR TCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGGAATTCGGTCATTTCTaGTACAATGTCACACTCCCA +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMEFGHF*YNVTLP
Trigger: TGGGAGTGTGACATTGTATCAGAAATGACCGAATTC...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR GCA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCAAGTCCTGCCGTGAATaGGGAGCAAGTTTGCGGAGA +
Preference number: 4 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPKSCRE*GASLRR
Trigger: TCTCCGCAAACTTGCTCCGCATTCACGGCAGGACTT...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACAAGTCCTGCCGTGAATaGGGAGCAAGTTTGCGGAGA +
Preference number: 4 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDKSCRE*GASLRR
Trigger: TCTCCGCAAACTTGCTCCGCATTCACGGCAGGACTT...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCTCTCTAAGGGACAGCTaGTGGCGCAACTTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPSLRDS*WRNLSA
Trigger: AGCTGACAAGTTGCGCCAGCAGCTGTCCCTTAGAGA...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGTCACTGCTCTCTATGTaGAGCTCATCAAACGTTTCA +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMSLLSM*SSSNVS
Trigger: TGAAACGTTTGATGAGCTGCACATAGAGAGCAGTGA...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACTCGGGTTTGAATGACTaGTTCTGGGGAGGGCATAGG +
Preference number: 4 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDSGLND*FWGGHR
Trigger: CCTATGCCCTCCCCAGAAGCAGTCATTCAAACCCGA...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCAACTGCGGCGGTCACTaGCTGGTTCCCCAAGTACAG +
Preference number: 4 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRINCGGH*LVPQVQ
Trigger: CTGTACTTGGGGAACCAGGCAGTGACCGCCGCAGTT...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACCCCAGGCTTCTGCTTTaGTTCCACAGAGGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: RFTECTHKQFEDQDNELHPRLLL*FHRGGL
Trigger: AAGCCCACCTCTGTGGAAGCAAAGCAGAAGCCTGGG...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAACAATGGCGCTATCTaGAGGGCGCTGGCCGTCTGT +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSNNGAI*RALAVC
Trigger: ACAGACGGCCAGCGCCCTGCAGATAGCGCCATTGTT...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000639875.1
CDS-3UTR GCA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACTGGAAGCGGCTGGCTTaGCATTGGGTCTTCAGCATA +
Preference number: 4 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDWKRLA*HWVFSI
Trigger: TATGCTGAAGACCCAATGGCAAGCCAGCCGCTTCCA...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000640590.1
CDS-3UTR GCA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACTGGAAGCGGCTGGCTTaGCATTGGGTCTTCAGCATA +
Preference number: 4 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDWKRLA*HWVFSI
Trigger: TATGCTGAAGACCCAATGGCAAGCCAGCCGCTTCCA...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000640590.1
CDS-3UTR GCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCACGTACACATTCTGGGTaGCTTGTCCTGGGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSRTHSG*LVLGPG
Trigger: ACCGGGACCCAGGACAAGGCACCCAGAATGTGTACG...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CCA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTTGTAGGAGGAGCCACTaGAGTACTCGCTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: CRFTECTHKQFEDQDNELCRRSH*STRCRC
Trigger: GCACCTGCAGCGAGTACTCCAGTGGCTCCTCCTACA...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCATGTAGGAGGAGCCACTaGAGTACTCGCTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSCRRSH*STRCRC
Trigger: GCACCTGCAGCGAGTACTCCAGTGGCTCCTCCTACA...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTGTAGGAGGAGCCACTaGAGTACTCGCTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCCRRSH*STRCRC
Trigger: GCACCTGCAGCGAGTACTCCAGTGGCTCCTCCTACA...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CCA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACGGAGCAATGCTAAGGTaGAAGGGTCATCGTCCGCAT +
Preference number: 4 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDGAMLR*KGHRPH
Trigger: ATGCGGACGATGACCCTTCCACCTTAGCATTGCTCC...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACTCAGTGTCTGAAAGCTaGAGGTTGAGAGCCATGCGG +
Preference number: 4 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDSVSES*RLRAMR
Trigger: CCGCATGGCTCTCAACCTCCAGCTTTCAGACACTGA...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACTCCTTGCTGTTTCACTaGGGACCCTGGTTTCGGACT +
Preference number: 4 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDSLLFH*GPWFRT
Trigger: AGTCCGAAACCAGGGTCCCCAGTGAAACAGCAAGGA...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTGGGGTCCCAAGTGTTTaGCGAGGAGAGGTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLGVPSV*RGEVLG
Trigger: CCCCAAAACCTCTCCTCGCCAAACACTTGGGACCCC...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGTCCTATGTCCCTTTGTaGGGTCCCAAGTGTTTGGCG +
Preference number: 4 (lower is better)
Translates to: LYCPVREISSGGLPAVNLSYVPL*GPKCLA
Trigger: CGCCAAACACTTGGGACCCCACAAAGGGACATAGGA...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAAGGCTGTTATGGCTTTTaGCGGGTGATGAGGATGATG +
Preference number: 4 (lower is better)
Translates to: PCQRNKLWWVACCEFDKEGCYGF*RVMRMM
Trigger: CATCATCCTCATCACCCGCCAAAAGCCATAACAGCC...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGTTTTTCATGTTTCCCTaGCACGGTGGAACTTTTCCT +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMFFMFP*HGGTFP
Trigger: AGGAAAAGTTCCACCGTGCCAGGGAAACATGAAAAA...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTGTGGCTGCGGGCTTTaGCGCCATTCATACCCAGAG +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCCGCGL*RHSYPE
Trigger: CTCTGGGTATGAATGGCGCCAAAGCCCGCAGCCACA...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTTGTGGCTGCGGGCTTTaGCGCCATTCATACCCAGAG +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLCGCGL*RHSYPE
Trigger: CTCTGGGTATGAATGGCGCCAAAGCCCGCAGCCACA...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTTGTGTACTGAAGCTGTaGCTGCGGGCTTTGGCGCCA +
Preference number: 4 (lower is better)
Translates to: CRFTECTHKQFEDQDNELCVLKL*LRALAP
Trigger: TGGCGCCAAAGCCCGCAGCCACAGCTTCAGTACACA...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTAGGGCCTCCCAACACTaGGGAGACTCTCCAACATGG +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLRASQH*GDSPTW
Trigger: CCATGTTGGAGAGTCTCCCCAGTGTTGGGAGGCCCT...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCGTCTTCCTTTCCAGGTaGGATGAGGAGTCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPVFLSR*DEESLR
Trigger: TCTGAGGGACTCCTCATCCCACCTGGAAAGGAAGAC...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGGTCTTCCTTTCCAGGTaGGATGAGGAGTCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: LYCPVREISSGGLPAVNLVFLSR*DEESLR
Trigger: TCTGAGGGACTCCTCATCCCACCTGGAAAGGAAGAC...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCTGGGTGAAGGCCTGCTaGTCTTCCTTTCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRIWVKAC*SSFPGG
Trigger: CCCACCTGGAAAGGAAGACCAGCAGGCCTTCACCCA...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGCGGCGGTCACTGCCTaGTTCCCCAAGTACAGCCAC +
Preference number: 4 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQAAAVTA*FPKYSH
Trigger: GTGGCTGTACTTGGGGAACCAGGCAGTGACCGCCGC...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTGTCTGTTGGGGTGGGTaGGCAACTGCGGCGGTCACT +
Preference number: 4 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCVCWGG*ATAAVT
Trigger: AGTGACCGCCGCAGTTGCCCACCCACCCCAACAGAC...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACGCGATTTCCCGAGTCTaGGAGTGGAAAGGTTCCGAT +
Preference number: 4 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDAISRV*EWKGSD
Trigger: ATCGGAACCTTTCCACTCCCAGACTCGGGAAATCGC...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTGCAGAAAGGGCTGACTaGAGAGGCAGGAGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLAERAD*RGRRGS
Trigger: TGAGCCTCTCCTGCCTCTCCAGTCAGCCCTTTCTGC...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000639875.1
CDS-3UTR CCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCACTGAGGAAGCTGGTTTaGGGAGGCGGCTCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSLRKLV*GGGSEE
Trigger: CTCTTCAGAGCCGCCTCCCCAAACCAGCTTCCTCAG...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000639875.1
CDS-3UTR CCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCATTCACTCCCCCAGTCTaGAAGCGGCTGGCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSFTPPV*KRLACH
Trigger: ATGGCAAGCCAGCCGCTTCCAGACTGGGGGAGTGAA...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CCA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCTTCACTCCCCCAGTCTaGAAGCGGCTGGCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRIFTPPV*KRLACH
Trigger: ATGGCAAGCCAGCCGCTTCCAGACTGGGGGAGTGAA...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000640590.1
CDS-3UTR CCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTTTCACTCCCCCAGTCTaGAAGCGGCTGGCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLFTPPV*KRLACH
Trigger: ATGGCAAGCCAGCCGCTTCCAGACTGGGGGAGTGAA...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CCA 90 bp GCAGAAGAGGAGAAGAGCTCTGTGCTGATGCTTGTCCAAAGGTCAATTGACAGCACGAACAGTCAGACATaGGAACAAGTGCAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: AEEEKSSVLMLVQRSIDSTNSQT*EQVQKR
Trigger: CCTCTTCTGCACTTGTTCCCATGTCTGACTGTTCGT...GCTGTCAATTGACCTTTGGACAAGCATCAGCACAGAGCTCTTCTCCTCTTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427594.5
CDS-3UTR TCA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGTGTTGCTCCTCAAGCTaGGTCAGCAGATGCTCAATG +
Preference number: 4 (lower is better)
Translates to: LYCPVREISSGGLPAVNLCCSSS*VSRCSM
Trigger: CATTGAGCATCTGCTGACTCAGCTTGAGGAGCAACA...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACGGGGAGGGCATAGGGTaGGTGAAGATAGGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: RFTECTHKQFEDQDNELHGEGIG*VKIGFL
Trigger: CAAAAAGCCTATCTTCACTCACCCTATGCCCTCCCC...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTCAGTGGCTCATGGGTTaGAGGAGAGATCCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCQWLMG*RRDPGS
Trigger: ACTCCCAGGATCTCTCCTTCAACCCATGAGCCACTG...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACAGAAGGCTTGTCTCCTaGGTGTGTACTGAAGCTGTG +
Preference number: 4 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDRRLVS*VCTEAV
Trigger: CACAGCTTCAGTACACACTCAGGAGACAAGCCTTCT...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAAGTATTGGTAATGATCTaGGTGCGGACTTTGCCTGAC +
Preference number: 4 (lower is better)
Translates to: PCQRNKLWWVACCEFDKEVLVMI*VRTLPD
Trigger: GTCAGGCAAAGTCCGCACTCAGATCATTACCAATAC...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTCCTTTCCAGGTGGGATaGGGAGTCCCTCAGACTTTG +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCPFQVG*GVPQTL
Trigger: CAAAGTCTGAGGGACTCCTCATCCCACCTGGAAAGG...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACGAAGGTGTCTTTCGTTaGACATGCAACAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDEGVFR*TCNRAV
Trigger: CACAGCCCTGTTGCATGTTCAACGAAAGACACCTTC...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAAGCAGGAAGCATTACTTaGTCCACTTTCTGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: PCQRNKLWWVACCEFDKEAGSIT*STFCLW
Trigger: CCACAGACAGAAAGTGGATCAAGTAATGCTTCCTGC...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAATTCTTGTGGTTTCCTTaGGTACTGATAGAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: PCQRNKLWWVACCEFDKEFLWFP*VLIELP
Trigger: CGGCAGCTCTATCAGTACTCAAGGAAACCACAAGAA...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCCTTTTACCCTTTTCCTaGGGTTCTTCCCATCGTGCC +
Preference number: 4 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPLLPFS*GSSHRA
Trigger: GGCACGATGGGAAGAACCTCAGGAAAAGGGTAAAAG...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000405974.7
CDS-3UTR GCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTAATGCGGAGCAAGTTTaGGGAGACTTGCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLNAEQV*GDLLPG
Trigger: CCCAGGGAGCAAGTCTCCGCAAACTTGCTCCGCATT...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR GCA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAAGAGACAGTTCACTGCTaGTACTGTAGCTGTTTCGAG +
Preference number: 4 (lower is better)
Translates to: PCQRNKLWWVACCEFDKEETVHC*YCSCFE
Trigger: CTCGAAACAGCTACAGTAGCAGCAGTGAACTGTCTC...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCCACTGGAGTACTCGCTaGAGGTGCTTGAAAGAGACA +
Preference number: 4 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPHWSTR*RCLKET
Trigger: TGTCTCTTTCAAGCACCTGCAGCGAGTACTCCAGTG...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACGAAGGTTTCTTCCTCTaGACTTCTGTCGTGGCCGGA +
Preference number: 4 (lower is better)
Translates to: RFTECTHKQFEDQDNELHEGFFL*TSVVAG
Trigger: TCCGGCCACGACAGAAGTGCAGAGGAAGAAACCTTC...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACTCGGGTTTGAATGACTaGTTCTGGGGAGGGCATAGG +
Preference number: 4 (lower is better)
Translates to: RFTECTHKQFEDQDNELHSGLND*FWGGHR
Trigger: CCTATGCCCTCCCCAGAAGCAGTCATTCAAACCCGA...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAGCATCAGTCGCGGTTaGAGAGGCATCTGGATGCCT +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSSISRG*RGIWMP
Trigger: AGGCATCCAGATGCCTCTGCAACCGCGACTGATGCT...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTAGCATCAGTCGCGGTTaGAGAGGCATCTGGATGCCT +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCSISRG*RGIWMP
Trigger: AGGCATCCAGATGCCTCTGCAACCGCGACTGATGCT...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGCTGAGGCCTTGGCTCTaGTTCATTCTGCTTTTGGGA +
Preference number: 4 (lower is better)
Translates to: LYCPVREISSGGLPAVNLLRPWL*FILLLG
Trigger: TCCCAAAAGCAGAATGAAGCAGAGCCAAGGCCTCAG...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000640590.1
CDS-3UTR GCA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACCTGAGGCCTTGGCTCTaGTTCATTCTGCTTTTGGGA +
Preference number: 4 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDLRPWL*FILLLG
Trigger: TCCCAAAAGCAGAATGAAGCAGAGCCAAGGCCTCAG...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000640590.1
CDS-3UTR GCA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAACTCTGGTGGGTTGCCTaGTGTGAATTTGACAAGGAA +
Preference number: 4 (lower is better)
Translates to: PCQRNKLWWVACCEFDKELWWVA*CEFDKE
Trigger: TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAG...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTTGTGGCCTGCAGCTCTaGTTTGGAACTGCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: CRFTECTHKQFEDQDNELCGLQL*FGTAWS
Trigger: GCTCCAAGCAGTTCCAAACCAGAGCTGCAGGCCACA...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCCTAAGGGACAGCTGCTaGCGCAACTTGTCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPLRDSC*RNLSAF
Trigger: AAAAGCTGACAAGTTGCGCCAGCAGCTGTCCCTTAG...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACCTAAGGGACAGCTGCTaGCGCAACTTGTCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDLRDSC*RNLSAF
Trigger: AAAAGCTGACAAGTTGCGCCAGCAGCTGTCCCTTAG...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTCCCAGTCCCTCCTGCTaGGCATCCTGGAGCTGTGCG +
Preference number: 4 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLPSPSC*ASWSCA
Trigger: CGCACAGCTCCAGGATGCCCAGCAGGAGGGACTGGG...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACCAGCGGGGATTTGAATaGGGTCCTTGCTGTTTCACT +
Preference number: 4 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDQRGFE*GPCCFT
Trigger: AGTGAAACAGCAAGGACCCCATTCAAATCCCCGCTG...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCCTTCGGAGAGACCTTTaGAGGCCCCAGAGCCATTAC +
Preference number: 4 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRILRRDL*RPQSHY
Trigger: GTAATGGCTCTGGGGCCTCCAAAGGTCTCTCCGAAG...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCCACTTTGAGTCCCACTaGAAGGCGAGTTTTCAGTCC +
Preference number: 4 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPHFESH*KASFQS
Trigger: GGACTGAAAACTCGCCTTCCAGTGGGACTCAAAGTG...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACCTTTTCCTGAGCAGCTaGGGAGACTTCATGAGCACT +
Preference number: 4 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDLFLSS*GDFMST
Trigger: AGTGCTCATGAAGTCTCCCCAGCTGCTCAGGAAAAG...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACGATCTCCATGCTTGCTaGATTCTTGGAGTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDDLHAC*ILGVLW
Trigger: CCAGAGGACTCCAAGAATCCAGCAAGCATGGAGATC...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTCAGAAGGGGCCTTGTTaGGAGAGCTTTCCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCQKGPC*ESFPWK
Trigger: CTTCCACGGAAAGCTCTCCCAACAAGGCCCCTTCTG...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAGGAGACTCTCCAACATaGGAGCAGAAGGGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSGDSPT*EQKGPC
Trigger: ACAAGGCCCCTTCTGCTCCCATGTTGGAGAGTCTCC...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCGAGTCCCTCAGACTTTaGAGGGATCCTCAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPESLRL*RDPQRQ
Trigger: TTGCCTTTGAGGATCCCTCCAAAGTCTGAGGGACTC...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCACAAGTACAGCCACATTaGCACTGGGGCACTCTCCCT +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSQVQPH*HWGTLP
Trigger: AGGGAGAGTGCCCCAGTGCCAATGTGGCTGTACTTG...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCGAAAACCAAACCAGCTaGCAAAAGAAGGCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPENQTS*QKKAQA
Trigger: AGCCTGGGCCTTCTTTTGCCAGCTGGTTTGGTTTTC...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAACCTGCTACTCAGAGCTaGAAGTCTACTCTTCCGAAA +
Preference number: 4 (lower is better)
Translates to: PCQRNKLWWVACCEFDKEPATQS*KSTLPK
Trigger: TTTCGGAAGAGTAGACTTCCAGCTCTGAGTAGCAGG...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGTCCAATGTTCTCATCTaGCAGTTGGATTCTATGATG +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMSNVLI*QLDSMM
Trigger: CATCATAGAATCCAACTGCCAGATGAGAACATTGGA...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTCCCGAGTCTGGGAGTaGAAAGGTTCCGATCCCACT +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCSRVWE*KGSDPT
Trigger: AGTGGGATCGGAACCTTTCCACTCCCAGACTCGGGA...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCATCCCGAGTCTGGGAGTaGAAAGGTTCCGATCCCACT +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSSRVWE*KGSDPT
Trigger: AGTGGGATCGGAACCTTTCCACTCCCAGACTCGGGA...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000639875.1
CDS-3UTR CCA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACATGTGGAATGAACAATaGCGCTATCTGCAGGGCGCT +
Preference number: 4 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDMWNEQ*RYLQGA
Trigger: AGCGCCCTGCAGATAGCGCCATTGTTCATTCCACAT...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCACAGTCTGGAAGCGGCTaGCTTGCCATTGGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSQSGSG*LAIGSS
Trigger: TGAAGACCCAATGGCAAGCCAGCCGCTTCCAGACTG...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTCAGTCTGGAAGCGGCTaGCTTGCCATTGGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCQSGSG*LAIGSS
Trigger: TGAAGACCCAATGGCAAGCCAGCCGCTTCCAGACTG...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000640590.1
CDS-3UTR CCA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAATATTACTGCCACCGCTaGCAGAGTACGTACACATTC +
Preference number: 4 (lower is better)
Translates to: PCQRNKLWWVACCEFDKEYYCHR*QSTYTF
Trigger: GAATGTGTACGTACTCTGCCAGCGGTGGCAGTAATA...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CCA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAACAGAGAAATAAGCTCTaGTGGGTTGCCTGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: PCQRNKLWWVACCEFDKEQRNKL*WVACCE
Trigger: TTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTG...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR TCA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAATGCTCTGGAGATCCTTaGCTCTGCAATAGATTTCGT +
Preference number: 4 (lower is better)
Translates to: PCQRNKLWWVACCEFDKECSGDP*LCNRFR
Trigger: ACGAAATCTATTGCAGAGTCAAGGATCTCCAGAGCA...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACCTCAGCATCAGTTCGTaGCTGTGTCAGACTTCGGTT +
Preference number: 4 (lower is better)
Translates to: RFTECTHKQFEDQDNELHLSISS*LCQTSV
Trigger: AACCGAAGTCTGACACAGTCACGAACTGATGCTGAG...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTAGAGATGACCAGGGATaGCAGCCCCCAAGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLRDDQG*QPPSQG
Trigger: GCCCTGGCTTGGGGGCTGTCATCCCTGGTCATCTCT...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp TGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATAGAGATGACCAGGGATaGCAGCCCCCAAGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: CEFDKEGSGTAIVYCYLYRDDQG*QPPSQG
Trigger: GCCCTGGCTTGGGGGCTGTCATCCCTGGTCATCTCT...ATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTCTCGCTGCAGGTGCTTaGAAGAGACAGTTCACTGCT +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCLAAGA*KRQFTA
Trigger: AGCAGTGAACTGTCTCTTTCAAGCACCTGCAGCGAG...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCACTCGCTGCAGGTGCTTaGAAGAGACAGTTCACTGCT +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSLAAGA*KRQFTA
Trigger: AGCAGTGAACTGTCTCTTTCAAGCACCTGCAGCGAG...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR TCA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACACCAGCTTTTGCTGCTaGGGATTTTGTGTCACTGTC +
Preference number: 4 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDTSFCC*GFCVTV
Trigger: GACAGTGACACAAAATCCTCAGCAGCAAAAGCTGGT...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAGCTCTCAGTCTTCATaGATCGTGAGAGTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDSSQSS*IVRVSQ
Trigger: CTGGGAAACTCTCACGATTCATGAAGACTGAGAGCT...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTCAGCAGCGGGGATTTaGATGGGGTCCTTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCSAAGI*MGSLLF
Trigger: AAACAGCAAGGACCCCATTCAAATCCCCGCTGCTGA...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGCAGGGCATCGGGTTTaGATGACTGCTTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQAAGHRV*MTASGE
Trigger: CTCCCCAGAAGCAGTCATTCAAACCCGATGCCCTGC...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCGCAGGAAGCATTACTTaGTCCACTTTCTGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPAGSIT*STFCLW
Trigger: CCACAGACAGAAAGTGGATCAAGTAATGCTTCCTGC...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTGGGTCGGATGTGGAATaGACAATGGCGCTATCTGCA +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLGSDVE*TMALSA
Trigger: TGCAGATAGCGCCATTGTTCATTCCACATCCGACCC...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000639875.1
CDS-3UTR TCA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGTCCCTCTGGCGGTCATaGTGGGGTCGGATGTGGAAT +
Preference number: 4 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQASLWRS*WGRMWN
Trigger: ATTCCACATCCGACCCCATCATGACCGCCAGAGGGA...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR TCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTGGAACTGACTTTTCCTaGGGAAGCTGGTTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLGTDFS*GSWFGE
Trigger: CTCCCCAAACCAGCTTCCTCAGGAAAAGTCAGTTCC...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR TCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTGGAACTGACTTTTCCTaGGGAAGCTGGTTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCGTDFS*GSWFGE
Trigger: CTCCCCAAACCAGCTTCCTCAGGAAAAGTCAGTTCC...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000640590.1
CDS-3UTR TCA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGTTTGTGAGATGGAGATaGGGAGGAACCCTCCGATTT +
Preference number: 4 (lower is better)
Translates to: LYCPVREISSGGLPAVNLFVRWR*GGTLRF
Trigger: AAATCGGAGGGTTCCTCCTCATCTCCATCTCACAAA...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR TCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGCTCTGGCAACGAATCTaGAATTACACTAAAATGAAC +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMLWQRI*NYTKMN
Trigger: GTTCATTTTAGTGTAATTTCAGATTCGTTGCCAGAG...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR TCA 90 bp AGAAATAAGACTAGTAGTTACCAGGGGCTTGGGAGGGAAATGAGAACAAAGAGGGAGACAGGTCAAAGTTaGCGAACAGTCAGACATGGG +
Preference number: 4 (lower is better)
Translates to: RNKTSSYQGLGREMRTKRETGQS*RTVRHG
Trigger: CCCATGTCTGACTGTTCGTCAACTTTGACCTGTCTC...CCTCTTTGTTCTCATTTCCCTCCCAAGCCCCTGGTAACTACTAGTCTTATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427594.5
CDS-3UTR TCA 90 bp AGAAATAAGACTAGTAGTTACCAGGGGCTTGGGAGGGAAATGAGAACAAAGAGGTACTTAGAGGTACACTaGCACCAGGTCCTGGACAAC +
Preference number: 4 (lower is better)
Translates to: RNKTSSYQGLGREMRTKRYLEVH*HQVLDN
Trigger: GTTGTCCAGGACCTGGTGTCAGTGTACCTCTAAGTA...CCTCTTTGTTCTCATTTCCCTCCCAAGCCCCTGGTAACTACTAGTCTTATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427594.5
CDS-3UTR GCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGTCCTGCCGTGAATaGGGAGCAAGTTTGCGGAGA +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSKSCRE*GASLRR
Trigger: TCTCCGCAAACTTGCTCCGCATTCACGGCAGGACTT...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR GCA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACTGTATCAGCTTCTCATaGATGGCCCCCTCACTTGTT +
Preference number: 4 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDCISFS*MAPSLV
Trigger: AACAAGTGAGGGGGCCATGCATGAGAAGCTGATACA...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCTGTATCAGCTTCTCATaGATGGCCCCCTCACTTGTT +
Preference number: 4 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPCISFS*MAPSLV
Trigger: AACAAGTGAGGGGGCCATGCATGAGAAGCTGATACA...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAAGCATCTGAATTCTGTTaGGTTCAGACTCTAGGGTCA +
Preference number: 4 (lower is better)
Translates to: PCQRNKLWWVACCEFDKEASEFC*VQTLGS
Trigger: TGACCCTAGAGTCTGAACGCAACAGAATTCAGATGC...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCTCCATCCTGGAGAACTaGTGCTGCAAGCTACGCATC +
Preference number: 4 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRISILEN*CCKLRI
Trigger: GATGCGTAGCTTGCAGCAGCAGTTCTCCAGGATGGA...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTTCCATCCTGGAGAACTaGTGCTGCAAGCTACGCATC +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLSILEN*CCKLRI
Trigger: GATGCGTAGCTTGCAGCAGCAGTTCTCCAGGATGGA...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR GCA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACCCTCATCTGTACTGCTaGTTTCACTCCTCGAATCCT +
Preference number: 4 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDPHLYC*FHSSNP
Trigger: AGGATTCGAGGAGTGAAAGCAGCAGTACAGATGAGG...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCGAGACAGTTCACTGCTaGTACTGTAGCTGTTTCGAG +
Preference number: 4 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPETVHC*YCSCFE
Trigger: CTCGAAACAGCTACAGTAGCAGCAGTGAACTGTCTC...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACGAGACAGTTCACTGCTaGTACTGTAGCTGTTTCGAG +
Preference number: 4 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDETVHC*YCSCFE
Trigger: CTCGAAACAGCTACAGTAGCAGCAGTGAACTGTCTC...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTACTGCCATGTGGCCTaGAGCTCTGGTTTGGAACTG +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCYCHVA*SSGLEL
Trigger: CAGTTCCAAACCAGAGCTGCAGGCCACATGGCAGTA...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGTGTGGGTTAATTTACTaGCATGTGGCCTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LYCPVREISSGGLPAVNLCGLIY*HVACSS
Trigger: AGAGCTGCAGGCCACATGGCAGTAAATTAACCCACA...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTTCTCTAAGGGACAGCTaGTGGCGCAACTTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: CRFTECTHKQFEDQDNELSLRDS*WRNLSA
Trigger: AGCTGACAAGTTGCGCCAGCAGCTGTCCCTTAGAGA...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACTTTGCTTTTGATAGATaGCCATGGGTGCCGAAGACC +
Preference number: 4 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDFAFDR*PWVPKT
Trigger: GGTCTTCGGCACCCATGGGCATCTATCAAAAGCAAA...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCAGGGGATTTCACCCCTaGCTCCGGCCCAGAGCCACA +
Preference number: 4 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSRGFHP*LRPRAT
Trigger: TGTGGCTCTGGGCCGGAGGCAGGGGTGAAATCCCCT...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTGCCCATCAGCTAAACTaGCCTGTGCTTGTGAATCCG +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCAHQLN*PVLVNP
Trigger: CGGATTCACAAGCACAGGGCAGTTTAGCTGATGGGC...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAGCCCATCAGCTAAACTaGCCTGTGCTTGTGAATCCG +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSAHQLN*PVLVNP
Trigger: CGGATTCACAAGCACAGGGCAGTTTAGCTGATGGGC...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGCCCTGGGTGAAGGCCTaGTGGTCTTCCTTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQAPWVKA*WSSFPG
Trigger: ACCTGGAAAGGAAGACCAGCAGGCCTTCACCCAGGG...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAATGCTTGTTTCAAAAGTaGTTGGATGCTGAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: PCQRNKLWWVACCEFDKECLFQK*LDAESS
Trigger: GGAGGACTCAGCATCCAAGCACTTTTGAAACAAGCA...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGTTCTCCGATTATTTTTaGTTTGTAAACCGCCATCTG +
Preference number: 4 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMFSDYF*FVNRHL
Trigger: CAGATGGCGGTTTACAAAGCAAAAATAATCGGAGAA...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACAGGAGCCCTGAGAACTaGCCTTTAACACATTCCTGC +
Preference number: 4 (lower is better)
Translates to: RFTECTHKQFEDQDNELHRSPEN*PLTHSC
Trigger: GCAGGAATGTGTTAAAGGGCAGTTCTCAGGGCTCCT...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTAACAATGGCGCTATCTaGAGGGCGCTGGCCGTCTGT +
Preference number: 4 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCNNGAI*RALAVC
Trigger: ACAGACGGCCAGCGCCCTGCAGATAGCGCCATTGTT...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR GCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCATGGAAGCGGCTGGCTTaGCATTGGGTCTTCAGCATA +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSWKRLA*HWVFSI
Trigger: TATGCTGAAGACCCAATGGCAAGCCAGCCGCTTCCA...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR GCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCACACTGTCACTATTACTaGCACCGCTGGCAGAGTACG +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSHCHYY*HRWQST
Trigger: CGTACTCTGCCAGCGGTGGCAGTAATAGTGACAGTG...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR GCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTCACTGTCACTATTACTaGCACCGCTGGCAGAGTACG +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLHCHYY*HRWQST
Trigger: CGTACTCTGCCAGCGGTGGCAGTAATAGTGACAGTG...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR GCA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCCTCTGGTGGGTTGCCTaGTGTGAATTTGACAAGGAA +
Preference number: 4 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPLWWVA*CEFDKE
Trigger: TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAG...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGCCCTCACTTGTTCTTTaGGCAACTTCTCGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: LYCPVREISSGGLPAVNLPSLVL*ATSRCS
Trigger: ACTACAGCGAGAAGTTGCCCAAAGAACAAGTGAGGG...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTGGAGCAATGCTAAGGTaGAAGGGTCATCGTCCGCAT +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLGAMLR*KGHRPH
Trigger: ATGCGGACGATGACCCTTCCACCTTAGCATTGCTCC...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCCTGCAGCTCTGGTTTaGAACTGCTTGGAGCAATGC +
Preference number: 4 (lower is better)
Translates to: CRFTECTHKQFEDQDNELPAALV*NCLEQC
Trigger: GCATTGCTCCAAGCAGTTCCAAACCAGAGCTGCAGG...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATGGCCTTGGCCCTGTaGGCCCCTCTCCCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSMALAL*APLPLY
Trigger: GTACAGAGGGAGAGGGGCCCACAGGGCCAAGGCCAT...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGCAGTATGTTCTGCCTTaGGTCCAGCAGGAGTTGAAT +
Preference number: 4 (lower is better)
Translates to: LYCPVREISSGGLPAVNLQYVLP*VQQELN
Trigger: ATTCAACTCCTGCTGGACCCAAGGCAGAACATACTG...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACTTTGATAGATGCCCATaGGTGCCGAAGACCTGGAAT +
Preference number: 4 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDFDRCP*VPKTWN
Trigger: ATTCCAGGTCTTCGGCACCCATGGGCATCTATCAAA...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCGTCTGTTGGGGTGGGTaGGCAACTGCGGCGGTCACT +
Preference number: 4 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSVCWGG*ATAAVT
Trigger: AGTGACCGCCGCAGTTGCCCACCCACCCCAACAGAC...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTGCGATTTCCCGAGTCTaGGAGTGGAAAGGTTCCGAT +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLAISRV*EWKGSD
Trigger: ATCGGAACCTTTCCACTCCCAGACTCGGGAAATCGC...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000639875.1
CDS-3UTR CCA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTGCGATTTCCCGAGTCTaGGAGTGGAAAGGTTCCGAT +
Preference number: 4 (lower is better)
Translates to: CRFTECTHKQFEDQDNELAISRV*EWKGSD
Trigger: ATCGGAACCTTTCCACTCCCAGACTCGGGAAATCGC...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACGGGTTTGGGCTCTCATaGAAGAAACTGCAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: RFTECTHKQFEDQDNELHGFGLS*KKLQKG
Trigger: CCCTTTCTGCAGTTTCTTCCATGAGAGCCCAAACCC...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCCTATCTGCAGGGCGCTaGCCGTCTGTGGAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSLSAGR*PSVEEG
Trigger: GCCTTCCTCCACAGACGGCCAGCGCCCTGCAGATAG...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTCTGGGTGCCTTGTCCTaGGTCCCGGTGGCAGCAACT +
Preference number: 4 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLLGALS*VPVAAT
Trigger: AGTTGCTGCCACCGGGACCCAGGACAAGGCACCCAG...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTAGTACGTACACATTCTaGGTGCCTTGTCCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCSTYTF*VPCPGS
Trigger: GGACCCAGGACAAGGCACCCAGAATGTGTACGTACT...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAGTACGTACACATTCTaGGTGCCTTGTCCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSSTYTF*VPCPGS
Trigger: GGACCCAGGACAAGGCACCCAGAATGTGTACGTACT...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CCA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGCAGAGAAATAAGCTCTaGTGGGTTGCCTGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: LYCPVREISSGGLPAVNLQRNKL*WVACCE
Trigger: TTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTG...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACCAGAGAAATAAGCTCTaGTGGGTTGCCTGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDQRNKL*WVACCE
Trigger: TTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTG...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp GCAGAAGAGGAGAAGAGCTCTGTGCTGATGCTTGTCCAAAGGTCAATTGACAGCCCTGTGATTACAGCATaGACAATAAGACAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: AEEEKSSVLMLVQRSIDSPVITA*TIRQSP
Trigger: AGGAGACTGTCTTATTGTCCATGCTGTAATCACAGG...GCTGTCAATTGACCTTTGGACAAGCATCAGCACAGAGCTCTTCTCCTCTTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427594.5
3UTR CAA 72 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTaGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTA +
Preference number: 4 (lower is better)
Translates to: LYCPVREISSGG*PAVNLTRKALV
Trigger: TACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR TCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTTGTTGCTCCTCAAGCTaGGTCAGCAGATGCTCAATG +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLCCSSS*VSRCSM
Trigger: CATTGAGCATCTGCTGACTCAGCTTGAGGAGCAACA...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR TCA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCAACCGCTTCTCGCTTTaGAGACGTAAGTGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRINRFSL*RRKCLS
Trigger: GGAGAGACACTTACGTCTTCAAAGCGAGAAGCGGTT...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAACCGCTTCTCGCTTTaGAGACGTAAGTGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSNRFSL*RRKCLS
Trigger: GGAGAGACACTTACGTCTTCAAAGCGAGAAGCGGTT...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR TCA 90 bp ATGTTGCTTTACCATCTTCAACTTCTGGTAGATTCACACAGAGCAGCAGATGAGAACCGCTTCTCGCTTTaGAGACGTAAGTGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: MLLYHLQLLVDSHRAADENRFSL*RRKCLS
Trigger: GGAGAGACACTTACGTCTTCAAAGCGAGAAGCGGTT...CTCATCTGCTGCTCTGTGTGAATCTACCAGAAGTTGAAGATGGTAAAGCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427594.5
CDS-3UTR TCA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGTCATCAACCACCATGTaGAGATCTTCCAAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: LYCPVREISSGGLPAVNLSSTTM*RSSKAS
Trigger: GGAAGCTTTGGAAGATCTTCACATGGTGGTTGATGA...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAGATCAGAAGTGGGTCTaGCTCGCTGTTGGAATAGGA +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSDQKWV*LAVGIG
Trigger: TCCTATTCCAACAGCGAGTCAGACCCACTTCTGATC...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR TCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTCCAAGAGACGTGAGTaGAGTTTCTGGAGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCSKRRE*SFWRSR
Trigger: TCTGCTCCTCCAGAAACTTCACTCACGTCTCTTGGA...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCTCCAAGAGACGTGAGTaGAGTTTCTGGAGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRISKRRE*SFWRSR
Trigger: TCTGCTCCTCCAGAAACTTCACTCACGTCTCTTGGA...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCATCCAAGAGACGTGAGTaGAGTTTCTGGAGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSSKRRE*SFWRSR
Trigger: TCTGCTCCTCCAGAAACTTCACTCACGTCTCTTGGA...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR TCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTCTCAGCATCAGTTCGTaGCTGTGTCAGACTTCGGTT +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLLSISS*LCQTSV
Trigger: AACCGAAGTCTGACACAGTCACGAACTGATGCTGAG...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR TCA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCATGATTGCCTTTTCCTaGGGTTCTTCCCATCGTGCC +
Preference number: 4 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRIMIAFS*GSSHRA
Trigger: GGCACGATGGGAAGAACCTCAGGAAAAGGCAATCAT...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCTTTGGCCTAGTCTCTaGAGGGATGGGCACTTGTTT +
Preference number: 4 (lower is better)
Translates to: CRFTECTHKQFEDQDNELLWPSL*RDGHLF
Trigger: AAACAAGTGCCCATCCCTTCAGAGACTAGGCCAAAG...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCCTTTGGCCTAGTCTCTaGAGGGATGGGCACTTGTTT +
Preference number: 4 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRILWPSL*RDGHLF
Trigger: AAACAAGTGCCCATCCCTTCAGAGACTAGGCCAAAG...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCGGGTCCAGCAGGAGTTaGATTGATGGAAATCTCATT +
Preference number: 4 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPGSSRS*IDGNLI
Trigger: AATGAGATTTCCATCAATTCAACTCCTGCTGGACCC...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGTATTGTGTGTTGGTTTaGCCAGCTTTTGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: LYCPVREISSGGLPAVNLYCVLV*PAFAAE
Trigger: CTCAGCAGCAAAAGCTGGTCAAACCAACACACAATA...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGCGGTGGAACTTTTCCTaGGCAGCTGGGGAGACTTCA +
Preference number: 4 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQARWNFS*AAGETS
Trigger: TGAAGTCTCCCCAGCTGCTCAGGAAAAGTTCCACCG...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTGAAGGTGTCTTTCGTTaGACATGCAACAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCEGVFR*TCNRAV
Trigger: CACAGCCCTGTTGCATGTTCAACGAAAGACACCTTC...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACTCAAGAGTTCCGTCATaGAGGTGTCTTTCGTTGAAC +
Preference number: 4 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDSRVPS*RCLSLN
Trigger: GTTCAACGAAAGACACCTTCATGACGGAACTCTTGA...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACTCAAGAGTTCCGTCATaGAGGTGTCTTTCGTTGAAC +
Preference number: 4 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDSRVPS*RCLSLN
Trigger: GTTCAACGAAAGACACCTTCATGACGGAACTCTTGA...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTATGAGACAGGAGCCCTaGGAACTGCCCTTTAACACA +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLMRQEP*ELPFNT
Trigger: TGTGTTAAAGGGCAGTTCTCAGGGCTCCTGTCTCAT...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGGGCAGTTGGATTCTATaGTGTGGCTCTGAAATACAG +
Preference number: 4 (lower is better)
Translates to: LYCPVREISSGGLPAVNLGSWIL*CGSEIQ
Trigger: CTGTATTTCAGAGCCACATCATAGAATCCAACTGCC...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAAGAATTCGGTCATTTCTaGTACAATGTCACACTCCCA +
Preference number: 4 (lower is better)
Translates to: PCQRNKLWWVACCEFDKEEFGHF*YNVTLP
Trigger: TGGGAGTGTGACATTGTATCAGAAATGACCGAATTC...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR TCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCACTTTTACCCTTTTCCTaGGGTTCTTCCCATCGTGCC +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSLLPFS*GSSHRA
Trigger: GGCACGATGGGAAGAACCTCAGGAAAAGGGTAAAAG...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405974.7
ENST00000409213.5
CDS-3UTR GCA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACTGCATTCCACAAGACTaGTGTCTAGAGACAGCCTTT +
Preference number: 4 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDCIPQD*CLETAF
Trigger: AAAGGCTGTCTCTAGACAGCAGTCTTGTGGAATGCA...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000405974.7
CDS-3UTR GCA 90 bp AGAAATAAGACTAGTAGTTACCAGGGGCTTGGGAGGGAAATGAGAACAAAGAGGTGTATCAGCTTCTCATaGATGGCCCCCTCACTTGTT +
Preference number: 4 (lower is better)
Translates to: RNKTSSYQGLGREMRTKRCISFS*MAPSLV
Trigger: AACAAGTGAGGGGGCCATGCATGAGAAGCTGATACA...CCTCTTTGTTCTCATTTCCCTCCCAAGCCCCTGGTAACTACTAGTCTTATTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427594.5
CDS-3UTR GCA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACCCTCATCTGTACTGCTaGTTTCACTCCTCGAATCCT +
Preference number: 4 (lower is better)
Translates to: RFTECTHKQFEDQDNELHPHLYC*FHSSNP
Trigger: AGGATTCGAGGAGTGAAAGCAGCAGTACAGATGAGG...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACTTCCCTCATCTGTACTaGTGCTTTCACTCCTCGAAT +
Preference number: 4 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDFPHLY*CFHSSN
Trigger: ATTCGAGGAGTGAAAGCAGCAGTACAGATGAGGGAA...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACAGTACTCGCTGCAGGTaGTTGAAAGAGACAGTTCAC +
Preference number: 4 (lower is better)
Translates to: RFTECTHKQFEDQDNELHSTRCR*LKETVH
Trigger: GTGAACTGTCTCTTTCAAGCACCTGCAGCGAGTACT...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCCACTGGAGTACTCGCTaGAGGTGCTTGAAAGAGACA +
Preference number: 4 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRIHWSTR*RCLKET
Trigger: TGTCTCTTTCAAGCACCTGCAGCGAGTACTCCAGTG...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTCACTGGAGTACTCGCTaGAGGTGCTTGAAAGAGACA +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLHWSTR*RCLKET
Trigger: TGTCTCTTTCAAGCACCTGCAGCGAGTACTCCAGTG...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR GCA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAATCACTGCTCTCTATGTaGAGCTCATCAAACGTTTCA +
Preference number: 4 (lower is better)
Translates to: PCQRNKLWWVACCEFDKESLLSM*SSSNVS
Trigger: TGAAACGTTTGATGAGCTGCACATAGAGAGCAGTGA...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTAAGCTCAGTATGTTCTaGCTTGGGTCCAGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: CRFTECTHKQFEDQDNELKLSMF*LGSSRS
Trigger: ACTCCTGCTGGACCCAAGGCAGAACATACTGAGCTT...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGCTCAGTATGTTCTaGCTTGGGTCCAGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSKLSMF*LGSSRS
Trigger: ACTCCTGCTGGACCCAAGGCAGAACATACTGAGCTT...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGGTTTTAGGTGTGGTTTaGTGGAGGAAAGGGATCTTC +
Preference number: 4 (lower is better)
Translates to: LYCPVREISSGGLPAVNLVLGVV*WRKGIF
Trigger: GAAGATCCCTTTCCTCCAGCAAACCACACCTAAAAC...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTGAGGTGGGCTTTGTTTaGACTTGGCCCTTTTCCACA +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLEVGFV*TWPFST
Trigger: TGTGGAAAAGGGCCAAGTGCAAACAAAGCCCACCTC...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTAGGAGCCCTGAGAACTaGCCTTTAACACATTCCTGC +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLRSPEN*PLTHSC
Trigger: GCAGGAATGTGTTAAAGGGCAGTTCTCAGGGCTCCT...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTCTGAGGCCTTGGCTCTaGTTCATTCTGCTTTTGGGA +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLLRPWL*FILLLG
Trigger: TCCCAAAAGCAGAATGAAGCAGAGCCAAGGCCTCAG...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR GCA 90 bp AAGGAGCCGAAAACAGCCTTTCTTTCCAGTTTGCTACATAATTGGTTTTGGCTTCTCCTTCTGGAGAACTaGTGCTGCAAGCTACGCATC +
Preference number: 4 (lower is better)
Translates to: KEPKTAFLSSLLHNWFWLLLLEN*CCKLRI
Trigger: GATGCGTAGCTTGCAGCAGCAGTTCTCCAGAAGGAG...AAGCCAAAACCAATTATGTAGCAAACTGGAAAGAAAGGCTGTTTTCGGCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427594.5
CDS-3UTR CCA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGCACATATCACAGTCCTaGAGACAGACACAGGAACTA +
Preference number: 4 (lower is better)
Translates to: LYCPVREISSGGLPAVNLHISQS*RQTQEL
Trigger: TAGTTCCTGTGTCTGTCTCCAGGACTGTGATATGTG...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CCA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACCCCTCACTTGTTCTTTaGGCAACTTCTCGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: RFTECTHKQFEDQDNELHPSLVL*ATSRCS
Trigger: ACTACAGCGAGAAGTTGCCCAAAGAACAAGTGAGGG...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CCA 90 bp AGAAATAAGACTAGTAGTTACCAGGGGCTTGGGAGGGAAATGAGAACAAAGAGGCCCTCACTTGTTCTTTaGGCAACTTCTCGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: RNKTSSYQGLGREMRTKRPSLVL*ATSRCS
Trigger: ACTACAGCGAGAAGTTGCCCAAAGAACAAGTGAGGG...CCTCTTTGTTCTCATTTCCCTCCCAAGCCCCTGGTAACTACTAGTCTTATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427594.5
CDS-3UTR CCA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCTGTTTCTTCCATCCTaGAGAACTGCTGCTGCAAGC +
Preference number: 4 (lower is better)
Translates to: CRFTECTHKQFEDQDNELLFLPS*RTAAAS
Trigger: GCTTGCAGCAGCAGTTCTCCAGGATGGAAGAAACAG...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTCTGTTTCTTCCATCCTaGAGAACTGCTGCTGCAAGC +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLLFLPS*RTAAAS
Trigger: GCTTGCAGCAGCAGTTCTCCAGGATGGAAGAAACAG...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCACTGTTTCTTCCATCCTaGAGAACTGCTGCTGCAAGC +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSLFLPS*RTAAAS
Trigger: GCTTGCAGCAGCAGTTCTCCAGGATGGAAGAAACAG...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTAAGGGAGTAGTGTGGTaGCTTCGGGCTCCATTAGTT +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCKGVVW*LRAPLV
Trigger: AACTAATGGAGCCCGAAGCCACCACACTACTCCCTT...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTGAGCTGTGCGGAAGTTaGGCGGAATGTTTTGGAATG +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLELCGS*AECFGM
Trigger: CATTCCAAAACATTCCGCCCAACTTCCGCACAGCTC...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTCACTTTGAGTCCCACTaGAAGGCGAGTTTTCAGTCC +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCHFESH*KASFQS
Trigger: GGACTGAAAACTCGCCTTCCAGTGGGACTCAAAGTG...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACATTCTTGGAGTCCTCTaGCTTAGACTTGTTCACAGC +
Preference number: 4 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDILGVL*LRLVHS
Trigger: GCTGTGAACAAGTCTAAGCCAGAGGACTCCAAGAAT...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTCAAAGGCAACTTACTTaGGCTCCCATGCTGACTGCT +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLQRQLT*APMLTA
Trigger: AGCAGTCAGCATGGGAGCCCAAGTAAGTTGCCTTTG...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTGAGTCCCTCAGACTTTaGAGGGATCCTCAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: CRFTECTHKQFEDQDNELESLRL*RDPQRQ
Trigger: TTGCCTTTGAGGATCCCTCCAAAGTCTGAGGGACTC...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCGAAAACCAAACCAGCTaGCAAAAGAAGGCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRIENQTS*QKKAQA
Trigger: AGCCTGGGCCTTCTTTTGCCAGCTGGTTTGGTTTTC...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGTCCCGAGTCTGGGAGTaGAAAGGTTCCGATCCCACT +
Preference number: 4 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQASRVWE*KGSDPT
Trigger: AGTGGGATCGGAACCTTTCCACTCCCAGACTCGGGA...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTGGGTTTGGGCTCTCATaGAAGAAACTGCAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: CRFTECTHKQFEDQDNELGFGLS*KKLQKG
Trigger: CCCTTTCTGCAGTTTCTTCCATGAGAGCCCAAACCC...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAGGGTTTGGGCTCTCATaGAAGAAACTGCAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSGFGLS*KKLQKG
Trigger: CCCTTTCTGCAGTTTCTTCCATGAGAGCCCAAACCC...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000639875.1
CDS-3UTR CCA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGTCACGTTCAAGGGTTTaGGCTCTCATGGAAGAAACT +
Preference number: 4 (lower is better)
Translates to: LYCPVREISSGGLPAVNLSRSRV*ALMEET
Trigger: AGTTTCTTCCATGAGAGCCCAAACCCTTGAACGTGA...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTATGTGGAATGAACAATaGCGCTATCTGCAGGGCGCT +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLMWNEQ*RYLQGA
Trigger: AGCGCCCTGCAGATAGCGCCATTGTTCATTCCACAT...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000639875.1
CDS-3UTR CCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTATGTGGAATGAACAATaGCGCTATCTGCAGGGCGCT +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCMWNEQ*RYLQGA
Trigger: AGCGCCCTGCAGATAGCGCCATTGTTCATTCCACAT...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTGCATGTCTGAGGCCTTaGCTCTGCTTCATTCTGCTT +
Preference number: 4 (lower is better)
Translates to: CRFTECTHKQFEDQDNELACLRP*LCFILL
Trigger: AAGCAGAATGAAGCAGAGCCAAGGCCTCAGACATGC...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000640590.1
CDS-3UTR CCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAGCATGTCTGAGGCCTTaGCTCTGCTTCATTCTGCTT +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSACLRP*LCFILL
Trigger: AAGCAGAATGAAGCAGAGCCAAGGCCTCAGACATGC...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTGCATGTCTGAGGCCTTaGCTCTGCTTCATTCTGCTT +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCACLRP*LCFILL
Trigger: AAGCAGAATGAAGCAGAGCCAAGGCCTCAGACATGC...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000640590.1
CDS-3UTR CCA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGCAGTCTGGAAGCGGCTaGCTTGCCATTGGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQAQSGSG*LAIGSS
Trigger: TGAAGACCCAATGGCAAGCCAGCCGCTTCCAGACTG...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000640590.1
CDS-3UTR CCA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCAGTTGTCTCAATTTCTaGGGCAGCGCTCTTCAGTGC +
Preference number: 4 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRISCLNF*GSALQC
Trigger: GCACTGAAGAGCGCTGCCCCAGAAATTGAGACAACT...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAGTTGTCTCAATTTCTaGGGCAGCGCTCTTCAGTGC +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSSCLNF*GSALQC
Trigger: GCACTGAAGAGCGCTGCCCCAGAAATTGAGACAACT...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CCA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAAAGAAATAAGCTCTGGTaGGTTGCCTGCTGTGAATTT +
Preference number: 4 (lower is better)
Translates to: PCQRNKLWWVACCEFDKERNKLW*VACCEF
Trigger: AAATTCACAGCAGGCAACCCACCAGAGCTTATTTCT...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR TCA 90 bp TGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATTGGGAAGTCCTGCCGTaGATGCGGAGCAAGTTTGCG +
Preference number: 4 (lower is better)
Translates to: CEFDKEGSGTAIVYCYLYWEVLP*MRSKFA
Trigger: CGCAAACTTGCTCCGCATTCACGGCAGGACTTCCCA...ATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCAGGGTCAATGTATTGTaGGTCTATTTTGGTACAGGC +
Preference number: 4 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPRVNVL*VYFGTG
Trigger: GCCTGTACCAAAATAGACTCACAATACATTGACCCT...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCTGCAAGCTACGCATCTaGATTCTGTTGCGTTCAGAC +
Preference number: 4 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRICKLRI*ILLRSD
Trigger: GTCTGAACGCAACAGAATTCAGATGCGTAGCTTGCA...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCATGCAAGCTACGCATCTaGATTCTGTTGCGTTCAGAC +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSCKLRI*ILLRSD
Trigger: GTCTGAACGCAACAGAATTCAGATGCGTAGCTTGCA...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR TCA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCAAGATCCAAGAGACGTaGGTGAAGTTTCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRIKIQET*VKFLEE
Trigger: CTCCTCCAGAAACTTCACTCACGTCTCTTGGATCTT...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTAAGATCCAAGAGACGTaGGTGAAGTTTCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLKIQET*VKFLEE
Trigger: CTCCTCCAGAAACTTCACTCACGTCTCTTGGATCTT...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR TCA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCATTGTCATCAGTGTCTaGAAGCTGGAGGTTGAGAGC +
Preference number: 4 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRIIVISV*KLEVES
Trigger: GCTCTCAACCTCCAGCTTTCAGACACTGATGACAAT...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGCAGTCTGGTGAGAGCTaGATTCAATGGGCTCACCGT +
Preference number: 4 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQAQSGES*IQWAHR
Trigger: ACGGTGAGCCCATTGAATTCAGCTCTCACCAGACTG...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGACAACCCCAGTCTGGTaGGAGCTGAATTCAATGGGC +
Preference number: 4 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQATTPVW*ELNSMG
Trigger: GCCCATTGAATTCAGCTCTCACCAGACTGGGGTTGT...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAGCTCTCAGTCTTCATaGATCGTGAGAGTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSSSQSS*IVRVSQ
Trigger: CTGGGAAACTCTCACGATTCATGAAGACTGAGAGCT...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACATCTGGATTATCTGCTaGCTTGGTGTCCTTGATAAG +
Preference number: 4 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDIWIIC*LGVLDK
Trigger: CTTATCAAGGACACCAAGTCAGCAGATAATCCAGAT...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACGGCAGTTGGATTCTATaGTGTGGCTCTGAAATACAG +
Preference number: 4 (lower is better)
Translates to: RFTECTHKQFEDQDNELHGSWIL*CGSEIQ
Trigger: CTGTATTTCAGAGCCACATCATAGAATCCAACTGCC...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTGGGTCGGATGTGGAATaGACAATGGCGCTATCTGCA +
Preference number: 4 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCGSDVE*TMALSA
Trigger: TGCAGATAGCGCCATTGTTCATTCCACATCCGACCC...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR TCA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCTCCCTCTGGCGGTCATaGTGGGGTCGGATGTGGAAT +
Preference number: 4 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSSLWRS*WGRMWN
Trigger: ATTCCACATCCGACCCCATCATGACCGCCAGAGGGA...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR TCA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGGAACTGACTTTTCCTaGGGAAGCTGGTTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQAGTDFS*GSWFGE
Trigger: CTCCCCAAACCAGCTTCCTCAGGAAAAGTCAGTTCC...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000640590.1
CDS-3UTR TCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCATCTGCTTTTGGGAACTaGCTTTTCCTGAGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSSAFGN*LFLRKL
Trigger: CAGCTTCCTCAGGAAAAGTCAGTTCCCAAAAGCAGA...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR TCA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTTCTGCTTTTGGGAACTaGCTTTTCCTGAGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: CRFTECTHKQFEDQDNELSAFGN*LFLRKL
Trigger: CAGCTTCCTCAGGAAAAGTCAGTTCCCAAAAGCAGA...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000640590.1
CDS-3UTR TCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTTACCCCAGGCCTATCTaGACTACTCAAAGATGTCTC +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLYPRPI*TTQRCL
Trigger: GAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTA...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000639875.1
CDS-3UTR TCA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCTACCCCAGGCCTATCTaGACTACTCAAAGATGTCTC +
Preference number: 4 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRIYPRPI*TTQRCL
Trigger: GAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTA...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR TCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCATACCCCAGGCCTATCTaGACTACTCAAAGATGTCTC +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSYPRPI*TTQRCL
Trigger: GAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTA...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000639875.1
CDS-3UTR TCA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACTCAAGAGCATGGCACTaGTTCCATTTATTGCTGTCT +
Preference number: 4 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDSRAWH*FHLLLS
Trigger: AGACAGCAATAAATGGAATCAGTGCCATGCTCTTGA...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR TCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTTTGTGAGATGGAGATaGGGAGGAACCCTCCGATTT +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCFVRWR*GGTLRF
Trigger: AAATCGGAGGGTTCCTCCTCATCTCCATCTCACAAA...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR TCA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTTTTGTGAGATGGAGATaGGGAGGAACCCTCCGATTT +
Preference number: 4 (lower is better)
Translates to: CRFTECTHKQFEDQDNELFVRWR*GGTLRF
Trigger: AAATCGGAGGGTTCCTCCTCATCTCCATCTCACAAA...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR GCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTTGTATCAGCTTCTCATaGATGGCCCCCTCACTTGTT +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLCISFS*MAPSLV
Trigger: AACAAGTGAGGGGGCCATGCATGAGAAGCTGATACA...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR GCA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACGCATCTGAATTCTGTTaGGTTCAGACTCTAGGGTCA +
Preference number: 4 (lower is better)
Translates to: RFTECTHKQFEDQDNELHASEFC*VQTLGS
Trigger: TGACCCTAGAGTCTGAACGCAACAGAATTCAGATGC...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp AGAAATAAGACTAGTAGTTACCAGGGGCTTGGGAGGGAAATGAGAACAAAGAGGGCATCTGAATTCTGTTaGGTTCAGACTCTAGGGTCA +
Preference number: 4 (lower is better)
Translates to: RNKTSSYQGLGREMRTKRASEFC*VQTLGS
Trigger: TGACCCTAGAGTCTGAACGCAACAGAATTCAGATGC...CCTCTTTGTTCTCATTTCCCTCCCAAGCCCCTGGTAACTACTAGTCTTATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427594.5
CDS-3UTR GCA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTTCCATCCTGGAGAACTaGTGCTGCAAGCTACGCATC +
Preference number: 4 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCSILEN*CCKLRI
Trigger: GATGCGTAGCTTGCAGCAGCAGTTCTCCAGGATGGA...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCACCTCATCTGTACTGCTaGTTTCACTCCTCGAATCCT +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSPHLYC*FHSSNP
Trigger: AGGATTCGAGGAGTGAAAGCAGCAGTACAGATGAGG...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR GCA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCGCTGTTGGAATAGGATaGTTAGTGTTCGATTCTGCT +
Preference number: 4 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPAVGIG*LVFDSA
Trigger: AGCAGAATCGAACACTAAGCATCCTATTCCAACAGC...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACGCTGTTGGAATAGGATaGTTAGTGTTCGATTCTGCT +
Preference number: 4 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDAVGIG*LVFDSA
Trigger: AGCAGAATCGAACACTAAGCATCCTATTCCAACAGC...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGGCTGTTGGAATAGGATaGTTAGTGTTCGATTCTGCT +
Preference number: 4 (lower is better)
Translates to: LYCPVREISSGGLPAVNLAVGIG*LVFDSA
Trigger: AGCAGAATCGAACACTAAGCATCCTATTCCAACAGC...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTGAGACAGTTCACTGCTaGTACTGTAGCTGTTTCGAG +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLETVHC*YCSCFE
Trigger: CTCGAAACAGCTACAGTAGCAGCAGTGAACTGTCTC...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR GCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAGTACTCGCTGCAGGTaGTTGAAAGAGACAGTTCAC +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSSTRCR*LKETVH
Trigger: GTGAACTGTCTCTTTCAAGCACCTGCAGCGAGTACT...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR GCA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTTACTGCCATGTGGCCTaGAGCTCTGGTTTGGAACTG +
Preference number: 4 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCYCHVA*SSGLEL
Trigger: CAGTTCCAAACCAGAGCTGCAGGCCACATGGCAGTA...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCTGTGGGTTAATTTACTaGCATGTGGCCTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRICGLIY*HVACSS
Trigger: AGAGCTGCAGGCCACATGGCAGTAAATTAACCCACA...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACGACTTTTCTCATCACTaGTCTCTATGTGCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDDFSHH*SLCAAH
Trigger: ATGAGCTGCACATAGAGAGCAGTGATGAGAAAAGTC...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTATAGATGCCCATGGGTaGCGAAGACCTGGAATTACT +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCIDAHG*RRPGIT
Trigger: AGTAATTCCAGGTCTTCGGCACCCATGGGCATCTAT...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTTGTGATCTCCATGCTTaGTGGATTCTTGGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: CRFTECTHKQFEDQDNELCDLHA*WILGVL
Trigger: GAGGACTCCAAGAATCCAGCAAGCATGGAGATCACA...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCATGTGATCTCCATGCTTaGTGGATTCTTGGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSCDLHA*WILGVL
Trigger: GAGGACTCCAAGAATCCAGCAAGCATGGAGATCACA...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp TGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATAACTGCGGCGGTCACTaGCTGGTTCCCCAAGTACAG +
Preference number: 4 (lower is better)
Translates to: CEFDKEGSGTAIVYCYLYNCGGH*LVPQVQ
Trigger: CTGTACTTGGGGAACCAGGCAGTGACCGCCGCAGTT...ATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACAGATGTCCATTTTCCTaGTACTCAGAGCTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: RFTECTHKQFEDQDNELHRCPFS*YSELEV
Trigger: GACTTCCAGCTCTGAGTAGCAGGAAAATGGACATCT...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAATTGCAAGTTTTCATTTaGCTCTTTTACCAGGGAGTC +
Preference number: 4 (lower is better)
Translates to: PCQRNKLWWVACCEFDKELQVFI*LFYQGV
Trigger: GACTCCCTGGTAAAAGAGGCAAATGAAAACTTGCAA...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACTACAGAATCTGCAACTaGATCGTCTTCATCCTCTTG +
Preference number: 4 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDYRICN*IVFILL
Trigger: CAAGAGGATGAAGACGATGCAGTTGCAGATTCTGTA...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCCGTACACATTCTGGGTaGCTTGTCCTGGGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSRTHSG*LVLGPG
Trigger: ACCGGGACCCAGGACAAGGCACCCAGAATGTGTACG...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTCTCTGGTGGGTTGCCTaGTGTGAATTTGACAAGGAA +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCLWWVA*CEFDKE
Trigger: TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAG...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR GCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTCTCTGGTGGGTTGCCTaGTGTGAATTTGACAAGGAA +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLLWWVA*CEFDKE
Trigger: TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAG...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
CDS-3UTR CCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTCCCTCACTTGTTCTTTaGGCAACTTCTCGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLPSLVL*ATSRCS
Trigger: ACTACAGCGAGAAGTTGCCCAAAGAACAAGTGAGGG...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CCA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCCTTGAACAACTTGGTTaGCTACCTCATCAAGACATC +
Preference number: 4 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPLEQLG*LPHQDI
Trigger: GATGTCTTGATGAGGTAGCCAACCAAGTTGTTCAAG...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CCA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACGGTCTGACTCGCTGTTaGAATAGGATGCTTAGTGTT +
Preference number: 4 (lower is better)
Translates to: RFTECTHKQFEDQDNELHGLTRC*NRMLSV
Trigger: AACACTAAGCATCCTATTCCAACAGCGAGTCAGACC...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CCA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAAGATTTTGTATTTAGTTaGTGTTCGTGCACCTCAGCA +
Preference number: 4 (lower is better)
Translates to: PCQRNKLWWVACCEFDKEDFVFS*CSCTSA
Trigger: TGCTGAGGTGCACGAACACCAACTAAATACAAAATC...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CCA 90 bp TGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATTGTAGGAGGAGCCACTaGAGTACTCGCTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: CEFDKEGSGTAIVYCYLYCRRSH*STRCRC
Trigger: GCACCTGCAGCGAGTACTCCAGTGGCTCCTCCTACA...ATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CCA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACACTAGCAAAGCCACTTaGGAGCGAAGAATCAATACT +
Preference number: 4 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDTSKAT*ERRINT
Trigger: AGTATTGATTCTTCGCTCCCAAGTGGCTTTGCTAGT...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACTTTCAGGCCTTTCCTTaGGATAAACTGAGGATGTGC +
Preference number: 4 (lower is better)
Translates to: RFTECTHKQFEDQDNELHFQAFP*DKLRMC
Trigger: GCACATCCTCAGTTTATCCCAAGGAAAGGCCTGAAA...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCACAGTATGTTCTGCCTTaGGTCCAGCAGGAGTTGAAT +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSQYVLP*VQQELN
Trigger: ATTCAACTCCTGCTGGACCCAAGGCAGAACATACTG...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTTGGGTGCCGAAGACCTaGAATTACTCTGGCATGATA +
Preference number: 4 (lower is better)
Translates to: CRFTECTHKQFEDQDNELWVPKT*NYSGMI
Trigger: TATCATGCCAGAGTAATTCCAGGTCTTCGGCACCCA...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTTTTGATAGATGCCCATaGGTGCCGAAGACCTGGAAT +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLFDRCP*VPKTWN
Trigger: ATTCCAGGTCTTCGGCACCCATGGGCATCTATCAAA...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCGGCGAGGAGAGGTTTTaGGGACACCTCTCTTCGGAG +
Preference number: 4 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSGEERF*GHLSSE
Trigger: CTCCGAAGAGAGGTGTCCCCAAAACCTCTCCTCGCC...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTTCCTATGTCCCTTTGTaGGGTCCCAAGTGTTTGGCG +
Preference number: 4 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCSYVPL*GPKCLA
Trigger: CGCCAAACACTTGGGACCCCACAAAGGGACATAGGA...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAATTTCCAGTGGCTCATaGGTTGAAGGAGAGATCCTG +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSISSGS*VEGEIL
Trigger: CAGGATCTCTCCTTCAACCCATGAGCCACTGGAAAT...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACCAGCCACGGAACTTTTaGAGGCTTCATTTAAACTGT +
Preference number: 4 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDQPRNF*RLHLNC
Trigger: ACAGTTTAAATGAAGCCTCCAAAAGTTCCGTGGCTG...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATTGTGTACTGAAGCTGTaGCTGCGGGCTTTGGCGCCA +
Preference number: 4 (lower is better)
Translates to: CEFDKEGSGTAIVYCYLYCVLKL*LRALAP
Trigger: TGGCGCCAAAGCCCGCAGCCACAGCTTCAGTACACA...ATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATTGGGTGAAGGCCTGCTaGTCTTCCTTTCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: CEFDKEGSGTAIVYCYLYWVKAC*SSFPGG
Trigger: CCCACCTGGAAAGGAAGACCAGCAGGCCTTCACCCA...ATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGTCCACTTTCTGTCTGTaGAGCTGCTTTCTTATCAAC +
Preference number: 4 (lower is better)
Translates to: LYCPVREISSGGLPAVNLSTFCL*SCFLIN
Trigger: GTTGATAAGAAAGCAGCTCCACAGACAGAAAGTGGA...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGCGATTTCCCGAGTCTaGGAGTGGAAAGGTTCCGAT +
Preference number: 4 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQAAISRV*EWKGSD
Trigger: ATCGGAACCTTTCCACTCCCAGACTCGGGAAATCGC...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTGCAGAAAGGGCTGACTaGAGAGGCAGGAGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLAERAD*RGRRGS
Trigger: TGAGCCTCTCCTGCCTCTCCAGTCAGCCCTTTCTGC...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCCTGAGGAAGCTGGTTTaGGGAGGCGGCTCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSLRKLV*GGGSEE
Trigger: CTCTTCAGAGCCGCCTCCCCAAACCAGCTTCCTCAG...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTTATTACTGCCACCGCTaGCAGAGTACGTACACATTC +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLYYCHR*QSTYTF
Trigger: GAATGTGTACGTACTCTGCCAGCGGTGGCAGTAATA...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CCA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCTATTACTGCCACCGCTaGCAGAGTACGTACACATTC +
Preference number: 4 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRIYYCHR*QSTYTF
Trigger: GAATGTGTACGTACTCTGCCAGCGGTGGCAGTAATA...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CCA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGCATTTGAACCTTGACTaGCACAGGAAGAGAAGCTAT +
Preference number: 4 (lower is better)
Translates to: LYCPVREISSGGLPAVNLHLNLD*HRKRSY
Trigger: ATAGCTTCTCTTCCTGTGCCAGTCAAGGTTCAAATG...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGAGAAATAAGCTCTGGTaGGTTGCCTGCTGTGAATTT +
Preference number: 4 (lower is better)
Translates to: LYCPVREISSGGLPAVNLRNKLW*VACCEF
Trigger: AAATTCACAGCAGGCAACCCACCAGAGCTTATTTCT...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTCAGAGAAATAAGCTCTaGTGGGTTGCCTGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCQRNKL*WVACCE
Trigger: TTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTG...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTATTTCTGGGTCCCGGTaGCAGCAACTTCACTCCCCC +
Preference number: 4 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLISGSR*QQLHSP
Trigger: GGGGGAGTGAAGTTGCTGCCACCGGGACCCAGAAAT...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640590.1
CDS-3UTR TCA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGAACCGCTTCTCGCTTTaGAGACGTAAGTGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQANRFSL*RRKCLS
Trigger: GGAGAGACACTTACGTCTTCAAAGCGAGAAGCGGTT...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCATGCTCTGGAGATCCTTaGCTCTGCAATAGATTTCGT +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSCSGDP*LCNRFR
Trigger: ACGAAATCTATTGCAGAGTCAAGGATCTCCAGAGCA...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR TCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCATCATCAACCACCATGTaGAGATCTTCCAAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSSSTTM*RSSKAS
Trigger: GGAAGCTTTGGAAGATCTTCACATGGTGGTTGATGA...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR TCA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTGATCAGAAGTGGGTCTaGCTCGCTGTTGGAATAGGA +
Preference number: 4 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCDQKWV*LAVGIG
Trigger: TCCTATTCCAACAGCGAGTCAGACCCACTTCTGATC...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTTCCAAGAGACGTGAGTaGAGTTTCTGGAGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCSKRRE*SFWRSR
Trigger: TCTGCTCCTCCAGAAACTTCACTCACGTCTCTTGGA...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTGGGTCCAGCAGGAGTTaGATTGATGGAAATCTCATT +
Preference number: 4 (lower is better)
Translates to: CRFTECTHKQFEDQDNELGSSRS*IDGNLI
Trigger: AATGAGATTTCCATCAATTCAACTCCTGCTGGACCC...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCAAACAAGCAATTCCCTaGGGTAAAAGCTCAGTATGT +
Preference number: 4 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPKQAIP*GKSSVC
Trigger: ACATACTGAGCTTTTACCTCAGGGAATTGCTTGTTT...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGTTCTTTCACCCGCTGTaGTCTCCATGCTTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQAFFHPL*SPCLLD
Trigger: ATCCAGCAAGCATGGAGATCACAGCGGGTGAAAGAA...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCACCTGAATGCACAACATaGCCTTTTCTTCGATTGTGG +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSPECTT*PFLRLW
Trigger: CCACAATCGAAGAAAAGGTCATGTTGTGCATTCAGG...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCCTGAATGCACAACATaGCCTTTTCTTCGATTGTGG +
Preference number: 4 (lower is better)
Translates to: CRFTECTHKQFEDQDNELPECTT*PFLRLW
Trigger: CCACAATCGAAGAAAAGGTCATGTTGTGCATTCAGG...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAATTTTCCACATTTTCCTaGATGCACAACATGACCTTT +
Preference number: 4 (lower is better)
Translates to: PCQRNKLWWVACCEFDKEFSTFS*MHNMTF
Trigger: AAAGGTCATGTTGTGCATTCAGGAAAATGTGGAAAA...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTGGCAGTTGGATTCTATaGTGTGGCTCTGAAATACAG +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLGSWIL*CGSEIQ
Trigger: CTGTATTTCAGAGCCACATCATAGAATCCAACTGCC...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR TCA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCACATCATTTGAACCTTaGCTGGCACAGGAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRITSFEP*LAQEEK
Trigger: CTTCTCTTCCTGTGCCAGTCAAGGTTCAAATGATGT...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR TCA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACCCTTTATACATCATTTaGACCTTGACTGGCACAGGA +
Preference number: 4 (lower is better)
Translates to: RFTECTHKQFEDQDNELHPLYII*TLTGTG
Trigger: TCCTGTGCCAGTCAAGGTTCAAATGATGTATAAAGG...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR TCA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTTACCCACAAACAATTTaGGGACCAGGACAACGAACT +
Preference number: 4 (lower is better)
Translates to: CRFTECTHKQFEDQDNELYPQTI*GPGQRT
Trigger: AGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTA...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR TCA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCTACCCACAAACAATTTaGGGACCAGGACAACGAACT +
Preference number: 4 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRIYPQTI*GPGQRT
Trigger: AGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTA...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR TCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTACCCACAAACAATTTaGGGACCAGGACAACGAACT +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCYPQTI*GPGQRT
Trigger: AGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTA...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR TCA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCCTTATTACTATCACCTaGATCTCTGGCAACGAATCT +
Preference number: 4 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPLITIT*ISGNES
Trigger: AGATTCGTTGCCAGAGATTCAGGTGATAGTAATAAG...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR TCA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACCTTATTACTATCACCTaGATCTCTGGCAACGAATCT +
Preference number: 4 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDLITIT*ISGNES
Trigger: AGATTCGTTGCCAGAGATTCAGGTGATAGTAATAAG...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR TCA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACGAATTCGGTCATTTCTaGTACAATGTCACACTCCCA +
Preference number: 4 (lower is better)
Translates to: RFTECTHKQFEDQDNELHEFGHF*YNVTLP
Trigger: TGGGAGTGTGACATTGTATCAGAAATGACCGAATTC...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR GCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTTGCATTCCACAAGACTaGTGTCTAGAGACAGCCTTT +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLCIPQD*CLETAF
Trigger: AAAGGCTGTCTCTAGACAGCAGTCTTGTGGAATGCA...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000405974.7
CDS-3UTR GCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTGCATCTGAATTCTGTTaGGTTCAGACTCTAGGGTCA +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLASEFC*VQTLGS
Trigger: TGACCCTAGAGTCTGAACGCAACAGAATTCAGATGC...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR GCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCATTCCCTCATCTGTACTaGTGCTTTCACTCCTCGAAT +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSFPHLY*CFHSSN
Trigger: ATTCGAGGAGTGAAAGCAGCAGTACAGATGAGGGAA...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR GCA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGGATAAACTGAGGATGTaGCTTCCAGAAAGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: LYCPVREISSGGLPAVNLDKLRM*LPESVF
Trigger: GAAAACACTTTCTGGAAGGCACATCCTCAGTTTATC...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCGTTTTAGGTGTGGTTTaGTGGAGGAAAGGGATCTTC +
Preference number: 4 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRIVLGVV*WRKGIF
Trigger: GAAGATCCCTTTCCTCCAGCAAACCACACCTAAAAC...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGTCCGTGGAAGAGTTCTaGCGGGTAAGAGAATTGCCT +
Preference number: 4 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQASVEEF*RVRELP
Trigger: AGGCAATTCTCTTACCCGGCAGAACTCTTCCACGGA...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCATGCTTGTTTCAAAAGTaGTTGGATGCTGAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSCLFQK*LDAESS
Trigger: GGAGGACTCAGCATCCAAGCACTTTTGAAACAAGCA...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTAGATGTCCATTTTCCTaGTACTCAGAGCTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLRCPFS*YSELEV
Trigger: GACTTCCAGCTCTGAGTAGCAGGAAAATGGACATCT...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACCCTTTAACACATTCCTaGAGGAAGCATTACTTGATC +
Preference number: 4 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDPLTHS*RKHYLI
Trigger: GATCAAGTAATGCTTCCTGCAGGAATGTGTTAAAGG...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCTGAGGCCTTGGCTCTaGTTCATTCTGCTTTTGGGA +
Preference number: 4 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCLRPWL*FILLLG
Trigger: TCCCAAAAGCAGAATGAAGCAGAGCCAAGGCCTCAG...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000640590.1
CDS-3UTR GCA 90 bp AGAAATAAGACTAGTAGTTACCAGGGGCTTGGGAGGGAAATGAGAACAAAGAGGTGTATTCCACAAGACTaGTGTCTAGAGACAGCCTTT +
Preference number: 4 (lower is better)
Translates to: RNKTSSYQGLGREMRTKRCIPQD*CLETAF
Trigger: AAAGGCTGTCTCTAGACAGCAGTCTTGTGGAATACA...CCTCTTTGTTCTCATTTCCCTCCCAAGCCCCTGGTAACTACTAGTCTTATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427594.5
CDS-3UTR CCA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTGGTCTGACTCGCTGTTaGAATAGGATGCTTAGTGTT +
Preference number: 4 (lower is better)
Translates to: CRFTECTHKQFEDQDNELGLTRC*NRMLSV
Trigger: AACACTAAGCATCCTATTCCAACAGCGAGTCAGACC...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTGGTCTGACTCGCTGTTaGAATAGGATGCTTAGTGTT +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLGLTRC*NRMLSV
Trigger: AACACTAAGCATCCTATTCCAACAGCGAGTCAGACC...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CCA 90 bp TGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATTGTGGCCTGCAGCTCTaGTTTGGAACTGCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: CEFDKEGSGTAIVYCYLYCGLQL*FGTAWS
Trigger: GCTCCAAGCAGTTCCAAACCAGAGCTGCAGGCCACA...ATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTTTTCAGGCCTTTCCTTaGGATAAACTGAGGATGTGC +
Preference number: 4 (lower is better)
Translates to: CRFTECTHKQFEDQDNELFQAFP*DKLRMC
Trigger: GCACATCCTCAGTTTATCCCAAGGAAAGGCCTGAAA...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCCCCTGGTTTCGGACTTaGTGGATGAAGGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSPWFRT*WMKVLV
Trigger: CACCAGCACCTTCATCCACCAAGTCCGAAACCAGGG...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGGCTGTTATGGCTTTTaGCGGGTGATGAGGATGATG +
Preference number: 4 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQAGCYGF*RVMRMM
Trigger: CATCATCCTCATCACCCGCCAAAAGCCATAACAGCC...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTTTAGGTGTGGTTTGCTaGAGGAAAGGGATCTTCTCA +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLLGVVC*RKGIFS
Trigger: TGAGAAGATCCCTTTCCTCCAGCAAACCACACCTAA...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTTTAGGTGTGGTTTGCTaGAGGAAAGGGATCTTCTCA +
Preference number: 4 (lower is better)
Translates to: CRFTECTHKQFEDQDNELLGVVC*RKGIFS
Trigger: TGAGAAGATCCCTTTCCTCCAGCAAACCACACCTAA...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCAAAGGCAACTTACTTaGGCTCCCATGCTGACTGCT +
Preference number: 4 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCQRQLT*APMLTA
Trigger: AGCAGTCAGCATGGGAGCCCAAGTAAGTTGCCTTTG...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCCAAGTACAGCCACATTaGCACTGGGGCACTCTCCCT +
Preference number: 4 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSQVQPH*HWGTLP
Trigger: AGGGAGAGTGCCCCAGTGCCAATGTGGCTGTACTTG...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCTCACGTTCAAGGGTTTaGGCTCTCATGGAAGAAACT +
Preference number: 4 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRISRSRV*ALMEET
Trigger: AGTTTCTTCCATGAGAGCCCAAACCCTTGAACGTGA...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCATCACGTTCAAGGGTTTaGGCTCTCATGGAAGAAACT +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSSRSRV*ALMEET
Trigger: AGTTTCTTCCATGAGAGCCCAAACCCTTGAACGTGA...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000639875.1
CDS-3UTR CCA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTATGTGGAATGAACAATaGCGCTATCTGCAGGGCGCT +
Preference number: 4 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCMWNEQ*RYLQGA
Trigger: AGCGCCCTGCAGATAGCGCCATTGTTCATTCCACAT...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGATGTGGAATGAACAATaGCGCTATCTGCAGGGCGCT +
Preference number: 4 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQAMWNEQ*RYLQGA
Trigger: AGCGCCCTGCAGATAGCGCCATTGTTCATTCCACAT...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTGCATGTCTGAGGCCTTaGCTCTGCTTCATTCTGCTT +
Preference number: 4 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCACLRP*LCFILL
Trigger: AAGCAGAATGAAGCAGAGCCAAGGCCTCAGACATGC...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000640590.1
CDS-3UTR CCA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTCAGTCTGGAAGCGGCTaGCTTGCCATTGGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLQSGSG*LAIGSS
Trigger: TGAAGACCCAATGGCAAGCCAGCCGCTTCCAGACTG...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000640590.1
CDS-3UTR CCA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTAGTTGTCTCAATTTCTaGGGCAGCGCTCTTCAGTGC +
Preference number: 4 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCSCLNF*GSALQC
Trigger: GCACTGAAGAGCGCTGCCCCAGAAATTGAGACAACT...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CCA 90 bp AAGGAGCCGAAAACAGCCTTTCTTTCCAGTTTGCTACATAATTGGTTTTGGCTTACATTTTCCTCCTTCTaGAGAACTGCTGCTGCAAGC +
Preference number: 4 (lower is better)
Translates to: KEPKTAFLSSLLHNWFWLTFSSF*RTAAAS
Trigger: GCTTGCAGCAGCAGTTCTCCAGAAGGAGGAAAATGT...AAGCCAAAACCAATTATGTAGCAAACTGGAAAGAAAGGCTGTTTTCGGCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427594.5
CDS-3UTR CCA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTAGTTGTCTCAATTTCTaGGTCCCGGTGGCAGCAACT +
Preference number: 4 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCSCLNF*VPVAAT
Trigger: AGTTGCTGCCACCGGGACCCAGAAATTGAGACAACT...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640590.1
CDS-3UTR TCA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACTTTGGTACAGGCACTTaGGGTAGCTTATCTCATTTA +
Preference number: 4 (lower is better)
Translates to: RFTECTHKQFEDQDNELHFGTGT*GSLSHL
Trigger: TAAATGAGATAAGCTACCTCAAGTGCCTGTACCAAA...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTAGGGTCAATGTATTGTaGGTCTATTTTGGTACAGGC +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLRVNVL*VYFGTG
Trigger: GCCTGTACCAAAATAGACTCACAATACATTGACCCT...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR TCA 90 bp ATAAATCCTAAAGTGGACAACATCAGAGCCAAGAGCAATCTTGGTTATATGTTCTGTTGCTCCTCAAGCTaGGTCAGCAGATGCTCAATG +
Preference number: 4 (lower is better)
Translates to: INPKVDNIRAKSNLGYMFCCSSS*VSRCSM
Trigger: CATTGAGCATCTGCTGACTCAGCTTGAGGAGCAACA...GAACATATAACCAAGATTGCTCTTGGCTCTGATGTTGTCCACTTTAGGATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427594.5
CDS-3UTR TCA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTCTCGCTGCAGGTGCTTaGAAGAGACAGTTCACTGCT +
Preference number: 4 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLLAAGA*KRQFTA
Trigger: AGCAGTGAACTGTCTCTTTCAAGCACCTGCAGCGAG...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTAAATGTGGCTTTCCTTaGTACGAGTTGGAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCKCGFP*YELEVV
Trigger: AACTACCTCCAACTCGTATCAAGGAAAGCCACATTT...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAATGTGGCTTTCCTTaGTACGAGTTGGAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSKCGFP*YELEVV
Trigger: AACTACCTCCAACTCGTATCAAGGAAAGCCACATTT...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp TGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAGTCTGGTGAGAGCTaGATTCAATGGGCTCACCGT +
Preference number: 4 (lower is better)
Translates to: CEFDKEGSGTAIVYCYLYQSGES*IQWAHR
Trigger: ACGGTGAGCCCATTGAATTCAGCTCTCACCAGACTG...ATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCACAACCCCAGTCTGGTaGGAGCTGAATTCAATGGGC +
Preference number: 4 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSTTPVW*ELNSMG
Trigger: GCCCATTGAATTCAGCTCTCACCAGACTGGGGTTGT...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAATTAGTTTTGATTTCTaGGGTGAAGACTTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSISFDF*GEDLPL
Trigger: CAGGGGCAAGTCTTCACCTCAGAAATCAAAACTAAT...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTGTATTGGTAATGATCTaGGTGCGGACTTTGCCTGAC +
Preference number: 4 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCVLVMI*VRTLPD
Trigger: GTCAGGCAAAGTCCGCACTCAGATCATTACCAATAC...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGTTTTCCACATTTTCCTaGATGCACAACATGACCTTT +
Preference number: 4 (lower is better)
Translates to: LYCPVREISSGGLPAVNLFSTFS*MHNMTF
Trigger: AAAGGTCATGTTGTGCATTCAGGAAAATGTGGAAAA...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCGGAACTGACTTTTCCTaGGGAAGCTGGTTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSGTDFS*GSWFGE
Trigger: CTCCCCAAACCAGCTTCCTCAGGAAAAGTCAGTTCC...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000640590.1
CDS-3UTR TCA 90 bp TGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATGGAACTGACTTTTCCTaGGGAAGCTGGTTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: CEFDKEGSGTAIVYCYLYGTDFS*GSWFGE
Trigger: CTCCCCAAACCAGCTTCCTCAGGAAAAGTCAGTTCC...ATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000640590.1
CDS-3UTR TCA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTTCTGCTTTTGGGAACTaGCTTTTCCTGAGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCSAFGN*LFLRKL
Trigger: CAGCTTCCTCAGGAAAAGTCAGTTCCCAAAAGCAGA...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000640590.1
CDS-3UTR TCA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGTACCCCAGGCCTATCTaGACTACTCAAAGATGTCTC +
Preference number: 4 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQAYPRPI*TTQRCL
Trigger: GAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTA...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR TCA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGTTTGTGAGATGGAGATaGGGAGGAACCCTCCGATTT +
Preference number: 4 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQAFVRWR*GGTLRF
Trigger: AAATCGGAGGGTTCCTCCTCATCTCCATCTCACAAA...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR TCA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACCTCTGGCAACGAATCTaGAATTACACTAAAATGAAC +
Preference number: 4 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDLWQRI*NYTKMN
Trigger: GTTCATTTTAGTGTAATTTCAGATTCGTTGCCAGAG...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR TCA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTGAATTCGGTCATTTCTaGTACAATGTCACACTCCCA +
Preference number: 4 (lower is better)
Translates to: CRFTECTHKQFEDQDNELEFGHF*YNVTLP
Trigger: TGGGAGTGTGACATTGTATCAGAAATGACCGAATTC...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR GCA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGCTTAGTGTTCGATTCTaGTGTTCCAAATCAAACACT +
Preference number: 4 (lower is better)
Translates to: LYCPVREISSGGLPAVNLLSVRF*CSKSNT
Trigger: AGTGTTTGATTTGGAACAGCAGAATCGAACACTAAG...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTGCTGTTGGAATAGGATaGTTAGTGTTCGATTCTGCT +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLAVGIG*LVFDSA
Trigger: AGCAGAATCGAACACTAAGCATCCTATTCCAACAGC...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR GCA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGAGTACTCGCTGCAGGTaGTTGAAAGAGACAGTTCAC +
Preference number: 4 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQASTRCR*LKETVH
Trigger: GTGAACTGTCTCTTTCAAGCACCTGCAGCGAGTACT...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTTTTGCTTTTGATAGATaGCCATGGGTGCCGAAGACC +
Preference number: 4 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCFAFDR*PWVPKT
Trigger: GGTCTTCGGCACCCATGGGCATCTATCAAAAGCAAA...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTGAAGGTTTCTTCCTCTaGACTTCTGTCGTGGCCGGA +
Preference number: 4 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLEGFFL*TSVVAG
Trigger: TCCGGCCACGACAGAAGTGCAGAGGAAGAAACCTTC...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACTTCTGTCTGTGGAGCTaGTTTCTTATCAACTCTGTT +
Preference number: 4 (lower is better)
Translates to: RFTECTHKQFEDQDNELHFCLWS*FLINSV
Trigger: AACAGAGTTGATAAGAAAGCAGCTCCACAGACAGAA...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTTACAGAATCTGCAACTaGATCGTCTTCATCCTCTTG +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLYRICN*IVFILL
Trigger: CAAGAGGATGAAGACGATGCAGTTGCAGATTCTGTA...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR GCA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCTACAGAATCTGCAACTaGATCGTCTTCATCCTCTTG +
Preference number: 4 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRIYRICN*IVFILL
Trigger: CAAGAGGATGAAGACGATGCAGTTGCAGATTCTGTA...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACCTGAAATACAGAATCTaGAACTGCATCGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: RFTECTHKQFEDQDNELHLKYRI*NCIVFI
Trigger: GATGAAGACGATGCAGTTGCAGATTCTGTATTTCAG...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp TGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATTGGAAGCGGCTGGCTTaGCATTGGGTCTTCAGCATA +
Preference number: 4 (lower is better)
Translates to: CEFDKEGSGTAIVYCYLYWKRLA*HWVFSI
Trigger: TATGCTGAAGACCCAATGGCAAGCCAGCCGCTTCCA...ATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000640590.1
CDS-3UTR GCA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCCACTGTCACTATTACTaGCACCGCTGGCAGAGTACG +
Preference number: 4 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSHCHYY*HRWQST
Trigger: CGTACTCTGCCAGCGGTGGCAGTAATAGTGACAGTG...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTCACTGTCACTATTACTaGCACCGCTGGCAGAGTACG +
Preference number: 4 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLHCHYY*HRWQST
Trigger: CGTACTCTGCCAGCGGTGGCAGTAATAGTGACAGTG...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTTGTATTCCACAAGACTaGTGTCTAGAGACAGCCTTT +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLCIPQD*CLETAF
Trigger: AAAGGCTGTCTCTAGACAGCAGTCTTGTGGAATACA...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CCA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCTTGAACAACTTGGTTaGCTACCTCATCAAGACATC +
Preference number: 4 (lower is better)
Translates to: CRFTECTHKQFEDQDNELLEQLG*LPHQDI
Trigger: GATGTCTTGATGAGGTAGCCAACCAAGTTGTTCAAG...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCACTTGAACAACTTGGTTaGCTACCTCATCAAGACATC +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSLEQLG*LPHQDI
Trigger: GATGTCTTGATGAGGTAGCCAACCAAGTTGTTCAAG...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTCTTGAACAACTTGGTTaGCTACCTCATCAAGACATC +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCLEQLG*LPHQDI
Trigger: GATGTCTTGATGAGGTAGCCAACCAAGTTGTTCAAG...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTACTAGCAAAGCCACTTaGGAGCGAAGAATCAATACT +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLTSKAT*ERRINT
Trigger: AGTATTGATTCTTCGCTCCCAAGTGGCTTTGCTAGT...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTCCTGCAGCTCTGGTTTaGAACTGCTTGGAGCAATGC +
Preference number: 4 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLPAALV*NCLEQC
Trigger: GCATTGCTCCAAGCAGTTCCAAACCAGAGCTGCAGG...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGATTCAGTGGACACCCTaGGAACATTATCTACATTAT +
Preference number: 4 (lower is better)
Translates to: LYCPVREISSGGLPAVNLIQWTP*EHYLHY
Trigger: ATAATGTAGATAATGTTCCCAGGGTGTCCACTGAAT...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTTGGTTTCGGACTTGGTaGATGAAGGTGCTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCWFRTW*MKVLVN
Trigger: ATTCACCAGCACCTTCATCCACCAAGTCCGAAACCA...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATTCCTTGCTGTTTCACTaGGGACCCTGGTTTCGGACT +
Preference number: 4 (lower is better)
Translates to: CEFDKEGSGTAIVYCYLYSLLFH*GPWFRT
Trigger: AGTCCGAAACCAGGGTCCCCAGTGAAACAGCAAGGA...ATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCTTTTTCATGTTTCCCTaGCACGGTGGAACTTTTCCT +
Preference number: 4 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRIFFMFP*HGGTFP
Trigger: AGGAAAAGTTCCACCGTGCCAGGGAAACATGAAAAA...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTTGTTTCAAAAGTGCTTaGATGCTGAGTCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCCFKSA*MLSPPW
Trigger: CCAGGGAGGACTCAGCATCCAAGCACTTTTGAAACA...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCATCCACTTTCTGTCTGTaGAGCTGCTTTCTTATCAAC +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSSTFCL*SCFLIN
Trigger: GTTGATAAGAAAGCAGCTCCACAGACAGAAAGTGGA...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCTACCAGGGAGTCTTTTaGTACTTCCATATCGGCTTT +
Preference number: 4 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRIYQGVF*YFHIGF
Trigger: AAAGCCGATATGGAAGTACCAAAAGACTCCCTGGTA...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTACCAGGGAGTCTTTTaGTACTTCCATATCGGCTTT +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCYQGVF*YFHIGF
Trigger: AAAGCCGATATGGAAGTACCAAAAGACTCCCTGGTA...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACTCCAATGTTCTCATCTaGCAGTTGGATTCTATGATG +
Preference number: 4 (lower is better)
Translates to: RFTECTHKQFEDQDNELHSNVLI*QLDSMM
Trigger: CATCATAGAATCCAACTGCCAGATGAGAACATTGGA...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CCA 90 bp TGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATAGTACGTACACATTCTaGGTGCCTTGTCCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: CEFDKEGSGTAIVYCYLYSTYTF*VPCPGS
Trigger: GGACCCAGGACAAGGCACCCAGAATGTGTACGTACT...ATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CCA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTAGTACGTACACATTCTaGGTGCCTTGTCCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLSTYTF*VPCPGS
Trigger: GGACCCAGGACAAGGCACCCAGAATGTGTACGTACT...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTCATTTGAACCTTGACTaGCACAGGAAGAGAAGCTAT +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLHLNLD*HRKRSY
Trigger: ATAGCTTCTCTTCCTGTGCCAGTCAAGGTTCAAATG...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
CDS-3UTR CCA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCCATTTGAACCTTGACTaGCACAGGAAGAGAAGCTAT +
Preference number: 4 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRIHLNLD*HRKRSY
Trigger: ATAGCTTCTCTTCCTGTGCCAGTCAAGGTTCAAATG...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTAGAAATAAGCTCTGGTaGGTTGCCTGCTGTGAATTT +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCRNKLW*VACCEF
Trigger: AAATTCACAGCAGGCAACCCACCAGAGCTTATTTCT...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
3UTR CAA 72 bp CCTGTTGTAGGTTTACAGAGTGTACCCACAAACAATTaGAGGACCAGGACAACGAACTTCACAAAAACTTCA +
Preference number: 4 (lower is better)
Translates to: PVVGLQSVPTNN*RTRTTNFTKTS
Trigger: TGAAGTTTTTGTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACAACAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR TCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTTTTGGTACAGGCACTTaGGGTAGCTTATCTCATTTA +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLFGTGT*GSLSHL
Trigger: TAAATGAGATAAGCTACCTCAAGTGCCTGTACCAAA...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR TCA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCTGTTGCTCCTCAAGCTaGGTCAGCAGATGCTCAATG +
Preference number: 4 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSCCSSS*VSRCSM
Trigger: CATTGAGCATCTGCTGACTCAGCTTGAGGAGCAACA...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTTGCTCTGGAGATCCTTaGCTCTGCAATAGATTTCGT +
Preference number: 4 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCCSGDP*LCNRFR
Trigger: ACGAAATCTATTGCAGAGTCAAGGATCTCCAGAGCA...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTTCATCAACCACCATGTaGAGATCTTCCAAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCSSTTM*RSSKAS
Trigger: GGAAGCTTTGGAAGATCTTCACATGGTGGTTGATGA...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCGATCAGAAGTGGGTCTaGCTCGCTGTTGGAATAGGA +
Preference number: 4 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSDQKWV*LAVGIG
Trigger: TCCTATTCCAACAGCGAGTCAGACCCACTTCTGATC...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCCTCAGCATCAGTTCGTaGCTGTGTCAGACTTCGGTT +
Preference number: 4 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSLSISS*LCQTSV
Trigger: AACCGAAGTCTGACACAGTCACGAACTGATGCTGAG...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTCTCAGCATCAGTTCGTaGCTGTGTCAGACTTCGGTT +
Preference number: 4 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLLSISS*LCQTSV
Trigger: AACCGAAGTCTGACACAGTCACGAACTGATGCTGAG...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGTTCCTTGGGATAAACTaGGGATGTGCCTTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQAFLGIN*GCAFQK
Trigger: TTTCTGGAAGGCACATCCTCAGTTTATCCCAAGGAA...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCAAACAAGCAATTCCCTaGGGTAAAAGCTCAGTATGT +
Preference number: 4 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRIKQAIP*GKSSVC
Trigger: ACATACTGAGCTTTTACCTCAGGGAATTGCTTGTTT...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTTATTGTGTGTTGGTTTaGCCAGCTTTTGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCYCVLV*PAFAAE
Trigger: CTCAGCAGCAAAAGCTGGTCAAACCAACACACAATA...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCTTCAAAGAGGGGCCCTaGGCTCTCAGTCTTCATGAA +
Preference number: 4 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSFKEGP*ALSLHE
Trigger: TTCATGAAGACTGAGAGCTCAGGGCCCCTCTTTGAA...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTTTCAAAGAGGGGCCCTaGGCTCTCAGTCTTCATGAA +
Preference number: 4 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLFKEGP*ALSLHE
Trigger: TTCATGAAGACTGAGAGCTCAGGGCCCCTCTTTGAA...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp TGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATAGAAGGCTTGTCTCCTaGGTGTGTACTGAAGCTGTG +
Preference number: 4 (lower is better)
Translates to: CEFDKEGSGTAIVYCYLYRRLVS*VCTEAV
Trigger: CACAGCTTCAGTACACACTCAGGAGACAAGCCTTCT...ATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGACATCATTTGAACCTTaGCTGGCACAGGAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQATSFEP*LAQEEK
Trigger: CTTCTCTTCCTGTGCCAGTCAAGGTTCAAATGATGT...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR TCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTCTTATTACTATCACCTaGATCTCTGGCAACGAATCT +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCLITIT*ISGNES
Trigger: AGATTCGTTGCCAGAGATTCAGGTGATAGTAATAAG...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR GCA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCCTTCATTCGAGTTCATaGAATCTTTATAACCCCATT +
Preference number: 4 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPLHSSS*NLYNPI
Trigger: AATGGGGTTATAAAGATTGCATGAACTCGAATGAAG...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAGATAAACTGAGGATGTaGCTTCCAGAAAGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSDKLRM*LPESVF
Trigger: GAAAACACTTTCTGGAAGGCACATCCTCAGTTTATC...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCTCCGTGGAAGAGTTCTaGCGGGTAAGAGAATTGCCT +
Preference number: 4 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSSVEEF*RVRELP
Trigger: AGGCAATTCTCTTACCCGGCAGAACTCTTCCACGGA...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTTTCTGTCTGTGGAGCTaGTTTCTTATCAACTCTGTT +
Preference number: 4 (lower is better)
Translates to: CRFTECTHKQFEDQDNELFCLWS*FLINSV
Trigger: AACAGAGTTGATAAGAAAGCAGCTCCACAGACAGAA...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTCCTTTAACACATTCCTaGAGGAAGCATTACTTGATC +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLPLTHS*RKHYLI
Trigger: GATCAAGTAATGCTTCCTGCAGGAATGTGTTAAAGG...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCTGAAATACAGAATCTaGAACTGCATCGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: CRFTECTHKQFEDQDNELLKYRI*NCIVFI
Trigger: GATGAAGACGATGCAGTTGCAGATTCTGTATTTCAG...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTCTGAAATACAGAATCTaGAACTGCATCGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLLKYRI*NCIVFI
Trigger: GATGAAGACGATGCAGTTGCAGATTCTGTATTTCAG...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR GCA 90 bp TGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCTGAGGCCTTGGCTCTaGTTCATTCTGCTTTTGGGA +
Preference number: 4 (lower is better)
Translates to: CEFDKEGSGTAIVYCYLYLRPWL*FILLLG
Trigger: TCCCAAAAGCAGAATGAAGCAGAGCCAAGGCCTCAG...ATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000640590.1
CDS-3UTR CCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTATTTCCTCCCGCGGTTaGTTATCCTCTGTTTATTTT +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLISSRG*LSSVYF
Trigger: AAAATAAACAGAGGATAACCAACCGCGGGAGGAAAT...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAATTTCCTCCCGCGGTTaGTTATCCTCTGTTTATTTT +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSISSRG*LSSVYF
Trigger: AAAATAAACAGAGGATAACCAACCGCGGGAGGAAAT...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAGATTTTGTATTTAGTTaGTGTTCGTGCACCTCAGCA +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSDFVFS*CSCTSA
Trigger: TGCTGAGGTGCACGAACACCAACTAAATACAAAATC...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTGATTTTGTATTTAGTTaGTGTTCGTGCACCTCAGCA +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLDFVFS*CSCTSA
Trigger: TGCTGAGGTGCACGAACACCAACTAAATACAAAATC...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CCA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTGTGAAGACTTGCCCCTaGGAGGTATTTTTGTCAGAT +
Preference number: 4 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCVKTCP*EVFLSD
Trigger: ATCTGACAAAAATACCTCCCAGGGGCAAGTCTTCAC...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGAAGACTTGCCCCTaGGAGGTATTTTTGTCAGAT +
Preference number: 4 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQAVKTCP*EVFLSD
Trigger: ATCTGACAAAAATACCTCCCAGGGGCAAGTCTTCAC...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATAAGGGAGTAGTGTGGTaGCTTCGGGCTCCATTAGTT +
Preference number: 4 (lower is better)
Translates to: CEFDKEGSGTAIVYCYLYKGVVW*LRAPLV
Trigger: AACTAATGGAGCCCGAAGCCACCACACTACTCCCTT...ATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCGAGCTGTGCGGAAGTTaGGCGGAATGTTTTGGAATG +
Preference number: 4 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSELCGS*AECFGM
Trigger: CATTCCAAAACATTCCGCCCAACTTCCGCACAGCTC...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTTTGAATGACTGCTTCTaGGGAGGGCATAGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLLNDCF*GGHRVS
Trigger: ACTCACCCTATGCCCTCCCCAGAAGCAGTCATTCAA...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATTTGAATGACTGCTTCTaGGGAGGGCATAGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: CEFDKEGSGTAIVYCYLYLNDCF*GGHRVS
Trigger: ACTCACCCTATGCCCTCCCCAGAAGCAGTCATTCAA...ATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCTTTTCCTGAGCAGCTaGGGAGACTTCATGAGCACT +
Preference number: 4 (lower is better)
Translates to: CEFDKEGSGTAIVYCYLYLFLSS*GDFMST
Trigger: AGTGCTCATGAAGTCTCCCCAGCTGCTCAGGAAAAG...ATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCGATCTCCATGCTTGCTaGATTCTTGGAGTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSDLHAC*ILGVLW
Trigger: CCAGAGGACTCCAAGAATCCAGCAAGCATGGAGATC...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTGCTGTGTCTATTCCTTaGTTCAATCTTCAGTTGGTT +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLAVSIP*FNLQLV
Trigger: AACCAACTGAAGATTGAACCAAGGAATAGACACAGC...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTCCAATGTTCTCATCTaGCAGTTGGATTCTATGATG +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCSNVLI*QLDSMM
Trigger: CATCATAGAATCCAACTGCCAGATGAGAACATTGGA...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCATCCAATGTTCTCATCTaGCAGTTGGATTCTATGATG +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSSNVLI*QLDSMM
Trigger: CATCATAGAATCCAACTGCCAGATGAGAACATTGGA...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CCA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCGGGTTTGGGCTCTCATaGAAGAAACTGCAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSGFGLS*KKLQKG
Trigger: CCCTTTCTGCAGTTTCTTCCATGAGAGCCCAAACCC...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTGGGTTTGGGCTCTCATaGAAGAAACTGCAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLGFGLS*KKLQKG
Trigger: CCCTTTCTGCAGTTTCTTCCATGAGAGCCCAAACCC...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTTCACGTTCAAGGGTTTaGGCTCTCATGGAAGAAACT +
Preference number: 4 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCSRSRV*ALMEET
Trigger: AGTTTCTTCCATGAGAGCCCAAACCCTTGAACGTGA...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR TCA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTAGGGTCAATGTATTGTaGGTCTATTTTGGTACAGGC +
Preference number: 4 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCRVNVL*VYFGTG
Trigger: GCCTGTACCAAAATAGACTCACAATACATTGACCCT...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTTGCAAGCTACGCATCTaGATTCTGTTGCGTTCAGAC +
Preference number: 4 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLCKLRI*ILLRSD
Trigger: GTCTGAACGCAACAGAATTCAGATGCGTAGCTTGCA...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTAAGATCCAAGAGACGTaGGTGAAGTTTCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLKIQET*VKFLEE
Trigger: CTCCTCCAGAAACTTCACTCACGTCTCTTGGATCTT...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTATTGTCATCAGTGTCTaGAAGCTGGAGGTTGAGAGC +
Preference number: 4 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLIVISV*KLEVES
Trigger: GCTCTCAACCTCCAGCTTTCAGACACTGATGACAAT...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTAGTCACACATTCTTCTaGAGAAGTCCTTTTTACAAC +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLSHTFF*RSPFYN
Trigger: GTTGTAAAAAGGACTTCTTCAGAAGAATGTGTGACT...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTAGTCACACATTCTTCTaGAGAAGTCCTTTTTACAAC +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCSHTFF*RSPFYN
Trigger: GTTGTAAAAAGGACTTCTTCAGAAGAATGTGTGACT...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTACCAGCTTTTGCTGCTaGGGATTTTGTGTCACTGTC +
Preference number: 4 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLTSFCC*GFCVTV
Trigger: GACAGTGACACAAAATCCTCAGCAGCAAAAGCTGGT...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTGGAATTACTCTGGCATaGTATATTGTGTGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLGITLA*YIVCWF
Trigger: AAACCAACACACAATATATCATGCCAGAGTAATTCC...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTATTAGTTTTGATTTCTaGGGTGAAGACTTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCISFDF*GEDLPL
Trigger: CAGGGGCAAGTCTTCACCTCAGAAATCAAAACTAAT...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTTTCTTGTGGTTTCCTTaGGTACTGATAGAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLFLWFP*VLIELP
Trigger: CGGCAGCTCTATCAGTACTCAAGGAAACCACAAGAA...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCTCTGCTTTTGGGAACTaGCTTTTCCTGAGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSSAFGN*LFLRKL
Trigger: CAGCTTCCTCAGGAAAAGTCAGTTCCCAAAAGCAGA...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000640590.1
CDS-3UTR TCA 90 bp TGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATTCTGCTTTTGGGAACTaGCTTTTCCTGAGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: CEFDKEGSGTAIVYCYLYSAFGN*LFLRKL
Trigger: CAGCTTCCTCAGGAAAAGTCAGTTCCCAAAAGCAGA...ATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000640590.1
CDS-3UTR TCA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCTTTATACATCATTTaGACCTTGACTGGCACAGGA +
Preference number: 4 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCPLYII*TLTGTG
Trigger: TCCTGTGCCAGTCAAGGTTCAAATGATGTATAAAGG...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR TCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTCTCTGGCAACGAATCTaGAATTACACTAAAATGAAC +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLLWQRI*NYTKMN
Trigger: GTTCATTTTAGTGTAATTTCAGATTCGTTGCCAGAG...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
CDS-3UTR TCA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCCTCTGGCAACGAATCTaGAATTACACTAAAATGAAC +
Preference number: 4 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRILWQRI*NYTKMN
Trigger: GTTCATTTTAGTGTAATTTCAGATTCGTTGCCAGAG...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR TCA 90 bp AAGGAGCCGAAAACAGCCTTTCTTTCCAGTTTGCTACATAATTGGTTTTGGCTTAGGCCCCAATTTTTATaGAAAGTCTCAGGCAGAAAT +
Preference number: 4 (lower is better)
Translates to: KEPKTAFLSSLLHNWFWLRPQFL*KVSGRN
Trigger: ATTTCTGCCTGAGACTTTTCATAAAAATTGGGGCCT...AAGCCAAAACCAATTATGTAGCAAACTGGAAAGAAAGGCTGTTTTCGGCTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000427594.5
CDS-3UTR TCA 90 bp TGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATAGTTGTCTCAATTTCTaGGGAAGCTGGTTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: CEFDKEGSGTAIVYCYLYSCLNF*GSWFGE
Trigger: CTCCCCAAACCAGCTTCCTCAGAAATTGAGACAACT...ATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639875.1
CDS-3UTR GCA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCCTTAGTGTTCGATTCTaGTGTTCCAAATCAAACACT +
Preference number: 4 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRILSVRF*CSKSNT
Trigger: AGTGTTTGATTTGGAACAGCAGAATCGAACACTAAG...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCACTTAGTGTTCGATTCTaGTGTTCCAAATCAAACACT +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSLSVRF*CSKSNT
Trigger: AGTGTTTGATTTGGAACAGCAGAATCGAACACTAAG...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR GCA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTCTTAGTGTTCGATTCTaGTGTTCCAAATCAAACACT +
Preference number: 4 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCLSVRF*CSKSNT
Trigger: AGTGTTTGATTTGGAACAGCAGAATCGAACACTAAG...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCAGTACTCGCTGCAGGTaGTTGAAAGAGACAGTTCAC +
Preference number: 4 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSSTRCR*LKETVH
Trigger: GTGAACTGTCTCTTTCAAGCACCTGCAGCGAGTACT...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGACTTTTCTCATCACTaGTCTCTATGTGCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQADFSHH*SLCAAH
Trigger: ATGAGCTGCACATAGAGAGCAGTGATGAGAAAAGTC...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp TGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATATAGATGCCCATGGGTaGCGAAGACCTGGAATTACT +
Preference number: 4 (lower is better)
Translates to: CEFDKEGSGTAIVYCYLYIDAHG*RRPGIT
Trigger: AGTAATTCCAGGTCTTCGGCACCCATGGGCATCTAT...ATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCTTCTCCGATTATTTTTaGTTTGTAAACCGCCATCTG +
Preference number: 4 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRIFSDYF*FVNRHL
Trigger: CAGATGGCGGTTTACAAAGCAAAAATAATCGGAGAA...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGTACAGAATCTGCAACTaGATCGTCTTCATCCTCTTG +
Preference number: 4 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQAYRICN*IVFILL
Trigger: CAAGAGGATGAAGACGATGCAGTTGCAGATTCTGTA...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTGGAAGGCTCTGGTACTaGAATAGTTTATTGTTATCT +
Preference number: 4 (lower is better)
Translates to: CRFTECTHKQFEDQDNELGRLWY*NSLLLS
Trigger: AGATAACAATAAACTATTGCAGTACCAGAGCCTTCC...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR GCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTGGAAGGCTCTGGTACTaGAATAGTTTATTGTTATCT +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLGRLWY*NSLLLS
Trigger: AGATAACAATAAACTATTGCAGTACCAGAGCCTTCC...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
CDS-3UTR CCA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTTGGGTGCCGAAGACCTaGAATTACTCTGGCATGATA +
Preference number: 4 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLWVPKT*NYSGMI
Trigger: TATCATGCCAGAGTAATTCCAGGTCTTCGGCACCCA...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGTTGAAGGAGAGATCCTaGGAGTCTGTAATCCTATGT +
Preference number: 4 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQALKERS*ESVILC
Trigger: ACATAGGATTACAGACTCCCAGGATCTCTCCTTCAA...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGCAGCCACGGAACTTTTaGAGGCTTCATTTAAACTGT +
Preference number: 4 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQAQPRNF*RLHLNC
Trigger: ACAGTTTAAATGAAGCCTCCAAAAGTTCCGTGGCTG...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTAAAGGGATCTTCTCATaGATCTATTATCTACCCCAT +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLKGIFS*IYYLPH
Trigger: ATGGGGTAGATAATAGATCCATGAGAAGATCCCTTT...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCCAGAAGTTTCTAGCTTaGATGTACTGCTTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRIQKFLA*MYCLFQ
Trigger: TTGAAACAAGCAGTACATCCAAGCTAGAAACTTCTG...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTCCTGCTACTCAGAGCTaGAAGTCTACTCTTCCGAAA +
Preference number: 4 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLPATQS*KSTLPK
Trigger: TTTCGGAAGAGTAGACTTCCAGCTCTGAGTAGCAGG...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTTATTACTGCCACCGCTaGCAGAGTACGTACACATTC +
Preference number: 4 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLYYCHR*QSTYTF
Trigger: GAATGTGTACGTACTCTGCCAGCGGTGGCAGTAATA...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CCA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGCATTTGAACCTTGACTaGCACAGGAAGAGAAGCTAT +
Preference number: 4 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQAHLNLD*HRKRSY
Trigger: ATAGCTTCTCTTCCTGTGCCAGTCAAGGTTCAAATG...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp AGAAATAAGACTAGTAGTTACCAGGGGCTTGGGAGGGAAATGAGAACAAAGAGGGCTCAATGTATTTATTaGAGTCCATGTATTCCACAA +
Preference number: 4 (lower is better)
Translates to: RNKTSSYQGLGREMRTKRAQCIY*SPCIPQ
Trigger: TTGTGGAATACATGGACTCCAATAAATACATTGAGC...CCTCTTTGTTCTCATTTCCCTCCCAAGCCCCTGGTAACTACTAGTCTTATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427594.5
3UTR CAA 72 bp ATCCTAAAGTGGACAACATCAGAGCCAAGAGCAATCTaGGTTATATGTTCACAGCAGAGTATCTTAACTTCC +
Preference number: 4 (lower is better)
Translates to: ILKWTTSEPRAI*VICSQQSILTS
Trigger: GGAAGTTAAGATACTCTGCTGTGAACATATAACCAAGATTGCTCTTGGCTCTGATGTTGTCCACTTTAGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427594.5
CDS-3UTR TCA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTTTTGGTACAGGCACTTaGGGTAGCTTATCTCATTTA +
Preference number: 4 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCFGTGT*GSLSHL
Trigger: TAAATGAGATAAGCTACCTCAAGTGCCTGTACCAAA...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp TGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATTCATCAACCACCATGTaGAGATCTTCCAAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: CEFDKEGSGTAIVYCYLYSSTTM*RSSKAS
Trigger: GGAAGCTTTGGAAGATCTTCACATGGTGGTTGATGA...ATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCTACCCACAAACAATTTaGGGACCAGGACAACGAACT +
Preference number: 4 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSYPQTI*GPGQRT
Trigger: AGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTA...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR TCA 90 bp TGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATTACCCACAAACAATTTaGGGACCAGGACAACGAACT +
Preference number: 4 (lower is better)
Translates to: CEFDKEGSGTAIVYCYLYYPQTI*GPGQRT
Trigger: AGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTA...ATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR GCA 90 bp TGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATTTCCCTCATCTGTACTaGTGCTTTCACTCCTCGAAT +
Preference number: 4 (lower is better)
Translates to: CEFDKEGSGTAIVYCYLYFPHLY*CFHSSN
Trigger: ATTCGAGGAGTGAAAGCAGCAGTACAGATGAGGGAA...ATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR GCA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCCTTCATTCGAGTTCATaGAATCTTTATAACCCCATT +
Preference number: 4 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRILHSSS*NLYNPI
Trigger: AATGGGGTTATAAAGATTGCATGAACTCGAATGAAG...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp ATAAATCCTAAAGTGGACAACATCAGAGCCAAGAGCAATCTTGGTTATATGTTCATCTTAACTTCCTTTTaGCAGCCAAGTTCCCCAGTA +
Preference number: 4 (lower is better)
Translates to: INPKVDNIRAKSNLGYMFILTSF*QPSSPV
Trigger: TACTGGGGAACTTGGCTGGCAAAAGGAAGTTAAGAT...GAACATATAACCAAGATTGCTCTTGGCTCTGATGTTGTCCACTTTAGGATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427594.5
CDS-3UTR CCA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGATTTCCTCCCGCGGTTaGTTATCCTCTGTTTATTTT +
Preference number: 4 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQAISSRG*LSSVYF
Trigger: AAAATAAACAGAGGATAACCAACCGCGGGAGGAAAT...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CCA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAGTCTCTTTCCCTCCATaGATGAAGTTATTTATTTTC +
Preference number: 4 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSVSFPP*MKLFIF
Trigger: GAAAATAAATAACTTCATCCATGGAGGGAAAGAGAC...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTGTCTCTTTCCCTCCATaGATGAAGTTATTTATTTTC +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLVSFPP*MKLFIF
Trigger: GAAAATAAATAACTTCATCCATGGAGGGAAAGAGAC...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CCA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTGTCTCTTTCCCTCCATaGATGAAGTTATTTATTTTC +
Preference number: 4 (lower is better)
Translates to: CRFTECTHKQFEDQDNELVSFPP*MKLFIF
Trigger: GAAAATAAATAACTTCATCCATGGAGGGAAAGAGAC...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CCA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCGGTCTGACTCGCTGTTaGAATAGGATGCTTAGTGTT +
Preference number: 4 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSGLTRC*NRMLSV
Trigger: AACACTAAGCATCCTATTCCAACAGCGAGTCAGACC...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CCA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTGCTCAATGTATTTATTaGAGTCCATGTATTCCACAA +
Preference number: 4 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLAQCIY*SPCIPQ
Trigger: TTGTGGAATACATGGACTCCAATAAATACATTGAGC...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409213.5
ENST00000409261.6
3UTR CAA 72 bp TTTCCAGTTTGCTACATAATTGGTTTTGGCTTTCCTTaGCATTGCTTAAGGGAGAGCTTACATGCTAGATCA +
Preference number: 4 (lower is better)
Translates to: FPVCYIIGFGFP*HCLRESLHARS
Trigger: TGATCTAGCATGTAAGCTCTCCCTTAAGCAATGCAAAGGAAAGCCAAAACCAATTATGTAGCAAACTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427594.5
CDS-3UTR TCA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCAGGGTCAATGTATTGTaGGTCTATTTTGGTACAGGC +
Preference number: 4 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSRVNVL*VYFGTG
Trigger: GCCTGTACCAAAATAGACTCACAATACATTGACCCT...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTGGAATTACTCTGGCATaGTATATTGTGTGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCGITLA*YIVCWF
Trigger: AAACCAACACACAATATATCATGCCAGAGTAATTCC...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp TGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATATCTGGATTATCTGCTaGCTTGGTGTCCTTGATAAG +
Preference number: 4 (lower is better)
Translates to: CEFDKEGSGTAIVYCYLYIWIIC*LGVLDK
Trigger: CTTATCAAGGACACCAAGTCAGCAGATAATCCAGAT...ATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCCCTTTATACATCATTTaGACCTTGACTGGCACAGGA +
Preference number: 4 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSPLYII*TLTGTG
Trigger: TCCTGTGCCAGTCAAGGTTCAAATGATGTATAAAGG...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR TCA 90 bp TGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATGAATTCGGTCATTTCTaGTACAATGTCACACTCCCA +
Preference number: 4 (lower is better)
Translates to: CEFDKEGSGTAIVYCYLYEFGHF*YNVTLP
Trigger: TGGGAGTGTGACATTGTATCAGAAATGACCGAATTC...ATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR TCA 90 bp ATAAATCCTAAAGTGGACAACATCAGAGCCAAGAGCAATCTTGGTTATATGTTCTGTCCAAAGGTCAATTaGCAGCTTTTCTCATCTTGT +
Preference number: 4 (lower is better)
Translates to: INPKVDNIRAKSNLGYMFCPKVN*QLFSSC
Trigger: ACAAGATGAGAAAAGCTGTCAATTGACCTTTGGACA...GAACATATAACCAAGATTGCTCTTGGCTCTGATGTTGTCCACTTTAGGATTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427594.5
CDS-3UTR GCA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTGGAAGGCTCTGGTACTaGAATAGTTTATTGTTATCT +
Preference number: 4 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCGRLWY*NSLLLS
Trigger: AGATAACAATAAACTATTGCAGTACCAGAGCCTTCC...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR GCA 90 bp TGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATTGTATTCCACAAGACTaGTGTCTAGAGACAGCCTTT +
Preference number: 4 (lower is better)
Translates to: CEFDKEGSGTAIVYCYLYCIPQD*CLETAF
Trigger: AAAGGCTGTCTCTAGACAGCAGTCTTGTGGAATACA...ATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409261.6
CDS-3UTR CCA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTATTCAGTGGACACCCTaGGAACATTATCTACATTAT +
Preference number: 4 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCIQWTP*EHYLHY
Trigger: ATAATGTAGATAATGTTCCCAGGGTGTCCACTGAAT...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTTTGAAGGAGAGATCCTaGGAGTCTGTAATCCTATGT +
Preference number: 4 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLLKERS*ESVILC
Trigger: ACATAGGATTACAGACTCCCAGGATCTCTCCTTCAA...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTAAAGGGATCTTCTCATaGATCTATTATCTACCCCAT +
Preference number: 4 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCKGIFS*IYYLPH
Trigger: ATGGGGTAGATAATAGATCCATGAGAAGATCCCTTT...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTAGAAATAAGCTCTGGTaGGTTGCCTGCTGTGAATTT +
Preference number: 4 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLRNKLW*VACCEF
Trigger: AAATTCACAGCAGGCAACCCACCAGAGCTTATTTCT...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
3UTR CAA 72 bp AAGCTATCATATAAAGAATCACTCAAAGATTCCAAGTaGTCTACCCCAGGCCTATCTGAACTACTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: KLSYKESLKDSK*STPGLSELLKD
Trigger: ATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTTTATATGATAGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000639875.1
CDS-3UTR TCA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTTTTGGTACAGGCACTTaGGGTAGCTTATCTCATTTA +
Preference number: 4 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLFGTGT*GSLSHL
Trigger: TAAATGAGATAAGCTACCTCAAGTGCCTGTACCAAA...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR TCA 90 bp TGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCTTATTACTATCACCTaGATCTCTGGCAACGAATCT +
Preference number: 4 (lower is better)
Translates to: CEFDKEGSGTAIVYCYLYLITIT*ISGNES
Trigger: AGATTCGTTGCCAGAGATTCAGGTGATAGTAATAAG...ATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR GCA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCCTAGCTTGGATGTACTaGTTGTTTCAAAAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSLAWMY*LFQKCL
Trigger: CAAGCACTTTTGAAACAAGCAGTACATCCAAGCTAG...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp TGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCTAGCTTGGATGTACTaGTTGTTTCAAAAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: CEFDKEGSGTAIVYCYLYLAWMY*LFQKCL
Trigger: CAAGCACTTTTGAAACAAGCAGTACATCCAAGCTAG...ATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR GCA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCTTGCAAGTTTTCATTTaGCTCTTTTACCAGGGAGTC +
Preference number: 4 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSLQVFI*LFYQGV
Trigger: GACTCCCTGGTAAAAGAGGCAAATGAAAACTTGCAA...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTATTTCCTCCCGCGGTTaGTTATCCTCTGTTTATTTT +
Preference number: 4 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLISSRG*LSSVYF
Trigger: AAAATAAACAGAGGATAACCAACCGCGGGAGGAAAT...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CCA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCCTTTATAACCCCATTTaGTTATCACTGATGGGGGTT +
Preference number: 4 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSLYNPI*LSLMGV
Trigger: AACCCCCATCAGTGATAACCAAATGGGGTTATAAAG...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp TGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCTTTATAACCCCATTTaGTTATCACTGATGGGGGTT +
Preference number: 4 (lower is better)
Translates to: CEFDKEGSGTAIVYCYLYLYNPI*LSLMGV
Trigger: AACCCCCATCAGTGATAACCAAATGGGGTTATAAAG...ATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTGCTGTGTCTATTCCTTaGTTCAATCTTCAGTTGGTT +
Preference number: 4 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLAVSIP*FNLQLV
Trigger: AACCAACTGAAGATTGAACCAAGGAATAGACACAGC...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR TCA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCCTCTGGCAACGAATCTaGAATTACACTAAAATGAAC +
Preference number: 4 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSLWQRI*NYTKMN
Trigger: GTTCATTTTAGTGTAATTTCAGATTCGTTGCCAGAG...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR GCA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCGGAAGGCTCTGGTACTaGAATAGTTTATTGTTATCT +
Preference number: 4 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSGRLWY*NSLLLS
Trigger: AGATAACAATAAACTATTGCAGTACCAGAGCCTTCC...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CCA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTCAGAAGTTTCTAGCTTaGATGTACTGCTTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLQKFLA*MYCLFQ
Trigger: TTGAAACAAGCAGTACATCCAAGCTAGAAACTTCTG...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CCA 90 bp ATAAATCCTAAAGTGGACAACATCAGAGCCAAGAGCAATCTTGGTTATATGTTCCTACATAATTGGTTTTaGCTTTCCTTTGCATTGCTT +
Preference number: 4 (lower is better)
Translates to: INPKVDNIRAKSNLGYMFLHNWF*LSFALL
Trigger: AAGCAATGCAAAGGAAAGCCAAAACCAATTATGTAG...GAACATATAACCAAGATTGCTCTTGGCTCTGATGTTGTCCACTTTAGGATTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427594.5
CDS-3UTR CCA 90 bp TGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATGTCTCTTTCCCTCCATaGATGAAGTTATTTATTTTC +
Preference number: 4 (lower is better)
Translates to: CEFDKEGSGTAIVYCYLYVSFPP*MKLFIF
Trigger: GAAAATAAATAACTTCATCCATGGAGGGAAAGAGAC...ATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CCA 90 bp TGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATGCTCAATGTATTTATTaGAGTCCATGTATTCCACAA +
Preference number: 4 (lower is better)
Translates to: CEFDKEGSGTAIVYCYLYAQCIY*SPCIPQ
Trigger: TTGTGGAATACATGGACTCCAATAAATACATTGAGC...ATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409261.6
CDS GCA 90 bp GGCTCTGCAGGGCTTCAGGGCAGTCTGTTGGGGTGGGTGGGCAACTaGGGCGGTCACTGCCTGGTTCCCCAAGTACAGCCACATTGGCAC +
Preference number: 5 (lower is better)
Translates to: GSAGLQGSLLGWVGN*GGHCLVPQVQPHWH
Trigger: GTGCCAATGTGGCTGTACTTGGGGAACCAGGCAGTGACCGCCGCAGTTGCCCACCCACCCCAACAGACTGCCCTGAAGCCCTGCAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS TCA 90 bp GACTCGGTTTTCCTGAACATCCACAGCGGCTGGGAAGTCCTGCCGTaGATGCGGAGCAAGTTTGCGGAGACTTGCTCCCTGGGCTGCGGC +
Preference number: 5 (lower is better)
Translates to: DSVFLNIHSGWEVLP*MRSKFAETCSLGCG
Trigger: GCCGCAGCCCAGGGAGCAAGTCTCCGCAAACTTGCTCCGCATTCACGGCAGGACTTCCCAGCCGCTGTGGATGTTCAGGAAAACCGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS TCA 90 bp GACTTTGGAGGGATCCTCAAAGGCAACTTACTTGGGCTCCCATGCTaGCTGCTGAAGCTGCCTGAGCTCCCCAGGGAGCCCTTCCCGGAG +
Preference number: 5 (lower is better)
Translates to: DFGGILKGNLLGLPC*LLKLPELPREPFPE
Trigger: CTCCGGGAAGGGCTCCCTGGGGAGCTCAGGCAGCTTCAGCAGTCAGCATGGGAGCCCAAGTAAGTTGCCTTTGAGGATCCCTCCAAAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS GCA 90 bp GGCGGTCATGATGGGGTCGGATGTGGAATGAACAATGGCGCTATCTaGAGGGCGCTGGCCGTCTGTGGAGGAAGGCACTTCACGTTCAAG +
Preference number: 5 (lower is better)
Translates to: GGHDGVGCGMNNGAI*RALAVCGGRHFTFK
Trigger: CTTGAACGTGAAGTGCCTTCCTCCACAGACGGCCAGCGCCCTGCAGATAGCGCCATTGTTCATTCCACATCCGACCCCATCATGACCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS CCA 90 bp ACAGCCACATTGGCACTGGGGCACTCTCCCTGGGTGAAGGCCTGCTaGTCTTCCTTTCCAGGTGGGATGAGGAGTCCCTCAGACTTTGGA +
Preference number: 5 (lower is better)
Translates to: TATLALGHSPWVKAC*SSFPGGMRSPSDFG
Trigger: TCCAAAGTCTGAGGGACTCCTCATCCCACCTGGAAAGGAAGACCAGCAGGCCTTCACCCAGGGAGAGTGCCCCAGTGCCAATGTGGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CCA 90 bp GGGCGCTGGCCGTCTGTGGAGGAAGGCACTTCACGTTCAAGGGTTTaGGCTCTCATGGAAGAAACTGCAGAAAGGGCTGACTGGAGAGGC +
Preference number: 5 (lower is better)
Translates to: GRWPSVEEGTSRSRV*ALMEETAERADWRG
Trigger: GCCTCTCCAGTCAGCCCTTTCTGCAGTTTCTTCCATGAGAGCCCAAACCCTTGAACGTGAAGTGCCTTCCTCCACAGACGGCCAGCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS GCA 90 bp AGTACAGCCACATTGGCACTGGGGCACTCTCCCTGGGTGAAGGCCTaGTGGTCTTCCTTTCCAGGTGGGATGAGGAGTCCCTCAGACTTT +
Preference number: 5 (lower is better)
Translates to: STATLALGHSPWVKA*WSSFPGGMRSPSDF
Trigger: AAAGTCTGAGGGACTCCTCATCCCACCTGGAAAGGAAGACCAGCAGGCCTTCACCCAGGGAGAGTGCCCCAGTGCCAATGTGGCTGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CCA 90 bp TGGGTCCCGGTGGCAGCAACTTCACTCCCCCAGTCTGGAAGCGGCTaGCTTGCCATTGGGTCTTCAGCATATCCGAATGATGAGCATGTC +
Preference number: 5 (lower is better)
Translates to: WVPVAATSLPQSGSG*LAIGSSAYPNDEHV
Trigger: GACATGCTCATCATTCGGATATGCTGAAGACCCAATGGCAAGCCAGCCGCTTCCAGACTGGGGGAGTGAAGTTGCTGCCACCGGGACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000640590.1
CDS-3UTR CAA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGCAAGTTTGCGGAGACTaGCTCCCTGGGCTGCGGCTC +
Preference number: 5 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMQVCGD*LPGLRL
Trigger: GAGCCGCAGCCCAGGGAGCAAGTCTCCGCAAACTTG...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS TCA 90 bp CAAGTTGTCTCAATTTCTGAGGAAGCTGGTTTGGGGAGGCGGCTCTaGAGAGGCCTCATCCCTCTGGCGGTCATGATGGGGTCGGATGTG +
Preference number: 5 (lower is better)
Translates to: QVVSISEEAGLGRRL*RGLIPLAVMMGSDV
Trigger: CACATCCGACCCCATCATGACCGCCAGAGGGATGAGGCCTCTTCAGAGCCGCCTCCCCAAACCAGCTTCCTCAGAAATTGAGACAACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639875.1
CDS CCA 90 bp ATGGGGTCCTTGCTGTTTCACTGGGGACCCTGGTTTCGGACTTGGTaGATGAAGGTGCTGGTGAATAGTCATAGCTGGGCCTGGCCAGCA +
Preference number: 5 (lower is better)
Translates to: MGSLLFHWGPWFRTW*MKVLVNSHSWAWPA
Trigger: TGCTGGCCAGGCCCAGCTATGACTATTCACCAGCACCTTCATCCACCAAGTCCGAAACCAGGGTCCCCAGTGAAACAGCAAGGACCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CCA 90 bp GCTGGAGGGGGCATGAGCAGGGCATCGGGTTTGAATGACTGCTTCTaGGGAGGGCATAGGGTGAGTGAAGATAGGCTTTTTGAAGGCCAC +
Preference number: 5 (lower is better)
Translates to: AGGGMSRASGLNDCF*GGHRVSEDRLFEGH
Trigger: GTGGCCTTCAAAAAGCCTATCTTCACTCACCCTATGCCCTCCCCAGAAGCAGTCATTCAAACCCGATGCCCTGCTCATGCCCCCTCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGGGAGCAGAAGGGGCCTaGTTGGGAGAGCTTTCCGTG +
Preference number: 5 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMGAEGA*LGELSV
Trigger: CACGGAAAGCTCTCCCAACAAGGCCCCTTCTGCTCC...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGGCCCAGGCTTCTGCTTaGCTTCCACAGAGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMAQASA*LPQRWA
Trigger: AGCCCACCTCTGTGGAAGCAAAGCAGAAGCCTGGGC...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CCA 90 bp ATGTGCAGCTCATCAAACGTTTCATTGTCATCAGTGTCTGAAAGCTaGAGGTTGAGAGCCATGCGGCCATGGCCTTGGCCCTGTGGGCCC +
Preference number: 5 (lower is better)
Translates to: MCSSSNVSLSSVSES*RLRAMRPWPWPCGP
Trigger: GGGCCCACAGGGCCAAGGCCATGGCCGCATGGCTCTCAACCTCCAGCTTTCAGACACTGATGACAATGAAACGTTTGATGAGCTGCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CCA 90 bp CGTCTGTGGAGGAAGGCACTTCACGTTCAAGGGTTTGGGCTCTCATaGAAGAAACTGCAGAAAGGGCTGACTGGAGAGGCAGGAGAGGCT +
Preference number: 5 (lower is better)
Translates to: RLWRKALHVQGFGLS*KKLQKGLTGEAGEA
Trigger: AGCCTCTCCTGCCTCTCCAGTCAGCCCTTTCTGCAGTTTCTTCCATGAGAGCCCAAACCCTTGAACGTGAAGTGCCTTCCTCCACAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS CCA 90 bp ATGTGGAATGAACAATGGCGCTATCTGCAGGGCGCTGGCCGTCTGTaGAGGAAGGCACTTCACGTTCAAGGGTTTGGGCTCTCATGGAAG +
Preference number: 5 (lower is better)
Translates to: MWNEQWRYLQGAGRL*RKALHVQGFGLSWK
Trigger: CTTCCATGAGAGCCCAAACCCTTGAACGTGAAGTGCCTTCCTCCACAGACGGCCAGCGCCCTGCAGATAGCGCCATTGTTCATTCCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CAA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGTGGGGTCCCAAGTGTTaGGCGAGGAGAGGTTTTGGG +
Preference number: 5 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMWGPKC*ARRGFG
Trigger: CCCAAAACCTCTCCTCGCCAAACACTTGGGACCCCA...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGCCAGTGGCTCATGGGTaGAAGGAGAGATCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMPVAHG*KERSWE
Trigger: CTCCCAGGATCTCTCCTTCAACCCATGAGCCACTGG...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS GCA 90 bp CATCGTGCCACGTGTAGGAGGAGCCACTGGAGTACTCGCTGCAGGTaGTTGAAAGAGACAGTTCACTGCTGCTACTGTAGCTGTTTCGAG +
Preference number: 5 (lower is better)
Translates to: HRATCRRSHWSTRCR*LKETVHCCYCSCFE
Trigger: CTCGAAACAGCTACAGTAGCAGCAGTGAACTGTCTCTTTCAAGCACCTGCAGCGAGTACTCCAGTGGCTCCTCCTACACGTGGCACGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS GCA 90 bp GGAGCAGAAGGGGCCTTGTTGGGAGAGCTTTCCGTGGAAGAGTTCTaGCGGGTAAGAGAATTGCCTCTCTCGGCGGTATTGGTAATGATC +
Preference number: 5 (lower is better)
Translates to: GAEGALLGELSVEEF*RVRELPLSAVLVMI
Trigger: GATCATTACCAATACCGCCGAGAGAGGCAATTCTCTTACCCGGCAGAACTCTTCCACGGAAAGCTCTCCCAACAAGGCCCCTTCTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CCA 90 bp CTGCTGGTCTTCCTTTCCAGGTGGGATGAGGAGTCCCTCAGACTTTaGAGGGATCCTCAAAGGCAACTTACTTGGGCTCCCATGCTGACT +
Preference number: 5 (lower is better)
Translates to: LLVFLSRWDEESLRL*RDPQRQLTWAPMLT
Trigger: AGTCAGCATGGGAGCCCAAGTAAGTTGCCTTTGAGGATCCCTCCAAAGTCTGAGGGACTCCTCATCCCACCTGGAAAGGAAGACCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CCA 90 bp CATTATCTCCATAGTCCAGGTCACTGTCACTATTACTGCCACCGCTaGCAGAGTACGTACACATTCTGGGTGCCTTGTCCTGGGTCCCGG +
Preference number: 5 (lower is better)
Translates to: HYLHSPGHCHYYCHR*QSTYTFWVPCPGSR
Trigger: CCGGGACCCAGGACAAGGCACCCAGAATGTGTACGTACTCTGCCAGCGGTGGCAGTAATAGTGACAGTGACCTGGACTATGGAGATAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS TCA 90 bp TTGAAGCATTCAAAGGCCACGCTAACAGAACAGACTCGGTTTTCCTaGACATCCACAGCGGCTGGGAAGTCCTGCCGTGAATGCGGAGCA +
Preference number: 5 (lower is better)
Translates to: LKHSKATLTEQTRFS*TSTAAGKSCRECGA
Trigger: TGCTCCGCATTCACGGCAGGACTTCCCAGCCGCTGTGGATGTTCAGGAAAACCGAGTCTGTTCTGTTAGCGTGGCCTTTGAATGCTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS TCA 90 bp GCTCTCTATGTGCAGCTCATCAAACGTTTCATTGTCATCAGTGTCTaGAAGCTGGAGGTTGAGAGCCATGCGGCCATGGCCTTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: ALYVQLIKRFIVISV*KLEVESHAAMALAL
Trigger: CAGGGCCAAGGCCATGGCCGCATGGCTCTCAACCTCCAGCTTTCAGACACTGATGACAATGAAACGTTTGATGAGCTGCACATAGAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS GCA 90 bp CCATCCTGGAGAACTGCTGCTGCAAGCTACGCATCTGAATTCTGTTaGGTTCAGACTCTAGGGTCACCTCCTGCAACCGCTTCTCGCTTT +
Preference number: 5 (lower is better)
Translates to: PSWRTAAASYASEFC*VQTLGSPPATASRF
Trigger: AAAGCGAGAAGCGGTTGCAGGAGGTGACCCTAGAGTCTGAACGCAACAGAATTCAGATGCGTAGCTTGCAGCAGCAGTTCTCCAGGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CAA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGCAAGTTTGCGGAGACTaGCTCCCTGGGCTGCGGCTC +
Preference number: 5 (lower is better)
Translates to: LYCPVREISSGGLPAVNLQVCGD*LPGLRL
Trigger: GAGCCGCAGCCCAGGGAGCAAGTCTCCGCAAACTTG...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CAA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGAGCTGCTGGCGCAACTaGTCAGCTTTTCAGGCCTTT +
Preference number: 5 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMSCWRN*SAFQAF
Trigger: AAAGGCCTGAAAAGCTGACAAGTTGCGCCAGCAGCT...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGCACATTCTGGGTGCCTaGTCCTGGGTCCCGGTGGCA +
Preference number: 5 (lower is better)
Translates to: LYCPVREISSGGLPAVNLHILGA*SWVPVA
Trigger: TGCCACCGGGACCCAGGACAAGGCACCCAGAATGTG...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS TCA 90 bp ACTGTTTCTTCCATCCTGGAGAACTGCTGCTGCAAGCTACGCATCTaGATTCTGTTGCGTTCAGACTCTAGGGTCACCTCCTGCAACCGC +
Preference number: 5 (lower is better)
Translates to: TVSSILENCCCKLRI*ILLRSDSRVTSCNR
Trigger: GCGGTTGCAGGAGGTGACCCTAGAGTCTGAACGCAACAGAATTCAGATGCGTAGCTTGCAGCAGCAGTTCTCCAGGATGGAAGAAACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS GCA 90 bp ATGGCTCTTGTAGTGCTGTTTCCAGGGGAAGCCCATCAGCTAAACTaGCCTGTGCTTGTGAATCCGGTAGGGTCACATTTCTTTCACCCG +
Preference number: 5 (lower is better)
Translates to: MALVVLFPGEAHQLN*PVLVNPVGSHFFHP
Trigger: CGGGTGAAAGAAATGTGACCCTACCGGATTCACAAGCACAGGGCAGTTTAGCTGATGGGCTTCCCCTGGAAACAGCACTACAAGAGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS GCA 90 bp TCCTTCTGGAGAACTGCTGCTGCAAGCTACGCATCTGAATTCTGTTaGGTTCAGACTCTAGGGTCACCTCCTGCAACCGCTTCTCGCTTT +
Preference number: 5 (lower is better)
Translates to: SFWRTAAASYASEFC*VQTLGSPPATASRF
Trigger: AAAGCGAGAAGCGGTTGCAGGAGGTGACCCTAGAGTCTGAACGCAACAGAATTCAGATGCGTAGCTTGCAGCAGCAGTTCTCCAGAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427594.5
CDS CCA 90 bp GTTAATTTACTGCCATGTGGCCTGCAGCTCTGGTTTGGAACTGCTTaGAGCAATGCTAAGGTGGAAGGGTCATCGTCCGCATCAACGTGG +
Preference number: 5 (lower is better)
Translates to: VNLLPCGLQLWFGTA*SNAKVEGSSSASTW
Trigger: CCACGTTGATGCGGACGATGACCCTTCCACCTTAGCATTGCTCCAAGCAGTTCCAAACCAGAGCTGCAGGCCACATGGCAGTAAATTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACCTGTGGCTGCGGGCTTaGGCGCCATTCATACCCAGA +
Preference number: 5 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDLWLRA*APFIPR
Trigger: TCTGGGTATGAATGGCGCCAAAGCCCGCAGCCACAG...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGGCCCAGGCTTCTGCTTaGCTTCCACAGAGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: LYCPVREISSGGLPAVNLAQASA*LPQRWA
Trigger: AGCCCACCTCTGTGGAAGCAAAGCAGAAGCCTGGGC...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS TCA 90 bp CACTGCTGCTACTGTAGCTGTTTCGAGGACAGAGATGACCAGGGATaGCAGCCCCCAAGCCAGGGCATTTCAAGGCCGATTTTGTATTTA +
Preference number: 5 (lower is better)
Translates to: HCCYCSCFEDRDDQG*QPPSQGISRPILYL
Trigger: TAAATACAAAATCGGCCTTGAAATGCCCTGGCTTGGGGGCTGTCATCCCTGGTCATCTCTGTCCTCGAAACAGCTACAGTAGCAGCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS TCA 90 bp TACATTTTCCTCCTTCTGGAGAACTGCTGCTGCAAGCTACGCATCTaGATTCTGTTGCGTTCAGACTCTAGGGTCACCTCCTGCAACCGC +
Preference number: 5 (lower is better)
Translates to: YIFLLLENCCCKLRI*ILLRSDSRVTSCNR
Trigger: GCGGTTGCAGGAGGTGACCCTAGAGTCTGAACGCAACAGAATTCAGATGCGTAGCTTGCAGCAGCAGTTCTCCAGAAGGAGGAAAATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427594.5
CDS CCA 90 bp GTGGCCTGCAGCTCTGGTTTGGAACTGCTTGGAGCAATGCTAAGGTaGAAGGGTCATCGTCCGCATCAACGTGGGAATCTAGATCATAAA +
Preference number: 5 (lower is better)
Translates to: VACSSGLELLGAMLR*KGHRPHQRGNLDHK
Trigger: TTTATGATCTAGATTCCCACGTTGATGCGGACGATGACCCTTCCACCTTAGCATTGCTCCAAGCAGTTCCAAACCAGAGCTGCAGGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CCA 90 bp TCGGAAACACTGTGGGTTAATTTACTGCCATGTGGCCTGCAGCTCTaGTTTGGAACTGCTTGGAGCAATGCTAAGGTGGAAGGGTCATCG +
Preference number: 5 (lower is better)
Translates to: SETLWVNLLPCGLQL*FGTAWSNAKVEGSS
Trigger: CGATGACCCTTCCACCTTAGCATTGCTCCAAGCAGTTCCAAACCAGAGCTGCAGGCCACATGGCAGTAAATTAACCCACAGTGTTTCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCACAAGTTTGCGGAGACTaGCTCCCTGGGCTGCGGCTC +
Preference number: 5 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSQVCGD*LPGLRL
Trigger: GAGCCGCAGCCCAGGGAGCAAGTCTCCGCAAACTTG...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CAA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACGAATGCGGAGCAAGTTaGCGGAGACTTGCTCCCTGG +
Preference number: 5 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDECGAS*RRLAPW
Trigger: CCAGGGAGCAAGTCTCCGCAAACTTGCTCCGCATTC...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CAA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAAGAGGCGTCTGCACACTaGGGCACAGCTTCATCTCTA +
Preference number: 5 (lower is better)
Translates to: PCQRNKLWWVACCEFDKEEASAH*GTASSL
Trigger: TAGAGATGAAGCTGTGCCCAAGTGTGCAGACGCCTC...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACACTCAATGGCAGGCCTaGACCGTGACCCTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDTQWQA*TVTLES
Trigger: AGACTCCAGGGTCACGGTCAAGGCCTGCCATTGAGT...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACCCAGTGGCTCATGGGTaGAAGGAGAGATCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDPVAHG*KERSWE
Trigger: CTCCCAGGATCTCTCCTTCAACCCATGAGCCACTGG...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGGGCGCTATCATTCAATaGTCCTTTTCTCCCTGGAGA +
Preference number: 5 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMGAIIQ*SFSPWR
Trigger: TCTCCAGGGAGAAAAGGACAATTGAATGATAGCGCC...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACCTGTGGCTGCGGGCTTaGGCGCCATTCATACCCAGA +
Preference number: 5 (lower is better)
Translates to: RFTECTHKQFEDQDNELHLWLRA*APFIPR
Trigger: TCTGGGTATGAATGGCGCCAAAGCCCGCAGCCACAG...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCGGGGGCGTAGAAGGCTaGTCTCCTGAGTGTGTACTG +
Preference number: 5 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPGGVEG*SPECVL
Trigger: CAGTACACACTCAGGAGACAAGCCTTCTACGCCCCC...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACCCAAGTACAGCCACATaGGCACTGGGGCACTCTCCC +
Preference number: 5 (lower is better)
Translates to: RFTECTHKQFEDQDNELHPSTAT*ALGHSP
Trigger: GGGAGAGTGCCCCAGTGCCAATGTGGCTGTACTTGG...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCTTCAGGGCAGTCTGTaGGGGTGGGTGGGCAACTGC +
Preference number: 5 (lower is better)
Translates to: CRFTECTHKQFEDQDNELLQGSL*GWVGNC
Trigger: GCAGTTGCCCACCCACCCCAACAGACTGCCCTGAAG...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGGTTCTCATCTGGCAGTaGGATTCTATGATGTGGCTC +
Preference number: 5 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMVLIWQ*DSMMWL
Trigger: GAGCCACATCATAGAATCCAACTGCCAGATGAGAAC...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CAA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGTTCACGTTCAAGGGTTaGGGCTCTCATGGAAGAAAC +
Preference number: 5 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMFTFKG*GSHGRN
Trigger: GTTTCTTCCATGAGAGCCCAAACCCTTGAACGTGAA...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CAA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGCTGGAAGCGGCTGGCTaGCCATTGGGTCTTCAGCAT +
Preference number: 5 (lower is better)
Translates to: LYCPVREISSGGLPAVNLLEAAG*PLGLQH
Trigger: ATGCTGAAGACCCAATGGCAAGCCAGCCGCTTCCAG...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000640590.1
CDS-3UTR CAA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTCACATTCTGGGTGCCTaGTCCTGGGTCCCGGTGGCA +
Preference number: 5 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLHILGA*SWVPVA
Trigger: TGCCACCGGGACCCAGGACAAGGCACCCAGAATGTG...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CAA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACATTCTGGGTGCCTaGTCCTGGGTCCCGGTGGCA +
Preference number: 5 (lower is better)
Translates to: CRFTECTHKQFEDQDNELHILGA*SWVPVA
Trigger: TGCCACCGGGACCCAGGACAAGGCACCCAGAATGTG...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CAA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGCTCAAAGATTCCAAGTaGTCTACCCCAGGCCTATCT +
Preference number: 5 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMLKDSK*STPGLS
Trigger: AGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAG...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS TCA 90 bp TTGCGTTCAGACTCTAGGGTCACCTCCTGCAACCGCTTCTCGCTTTaGAGACGTAAGTGTCTCTCCTCTTCCAGTTCATGTATCAGCTTC +
Preference number: 5 (lower is better)
Translates to: LRSDSRVTSCNRFSL*RRKCLSSSSSCISF
Trigger: GAAGCTGATACATGAACTGGAAGAGGAGAGACACTTACGTCTTCAAAGCGAGAAGCGGTTGCAGGAGGTGACCCTAGAGTCTGAACGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000427594.5
CDS TCA 90 bp GCTGGCGCAACTTGTCAGCTTTTCAGGCCTTTCCTTGGGATAAACTaGGGATGTGCCTTCCAGAAAGTGTTTTCTGTTTGTCTCCCAGCC +
Preference number: 5 (lower is better)
Translates to: AGATCQLFRPFLGIN*GCAFQKVFSVCLPA
Trigger: GGCTGGGAGACAAACAGAAAACACTTTCTGGAAGGCACATCCTCAGTTTATCCCAAGGAAAGGCCTGAAAAGCTGACAAGTTGCGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS TCA 90 bp TTATGGCTTTTGGCGGGTGATGAGGATGATGAGGAACTGCTGACCTaGGATGATGGTGACTCATTTACCCCTAAGAAGGAAGGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: LWLLAGDEDDEELLT*DDGDSFTPKKEGLG
Trigger: CCCCAAGCCTTCCTTCTTAGGGGTAAATGAGTCACCATCATCTCAGGTCAGCAGTTCCTCATCATCCTCATCACCCGCCAAAAGCCATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS GCA 90 bp ACAGACTGTCGGAAACACTGTGGGTTAATTTACTGCCATGTGGCCTaGAGCTCTGGTTTGGAACTGCTTGGAGCAATGCTAAGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: TDCRKHCGLIYCHVA*SSGLELLGAMLRWK
Trigger: CTTCCACCTTAGCATTGCTCCAAGCAGTTCCAAACCAGAGCTGCAGGCCACATGGCAGTAAATTAACCCACAGTGTTTCCGACAGTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS GCA 90 bp CAGAGGCATCTGGATGCCTTCCAGAAGTTTCTAGCTTGGATGTACTaGTTGTTTCAAAAGTGCTTGGATGCTGAGTCCTCCCTGGGCTCT +
Preference number: 5 (lower is better)
Translates to: QRHLDAFQKFLAWMY*LFQKCLDAESSLGS
Trigger: AGAGCCCAGGGAGGACTCAGCATCCAAGCACTTTTGAAACAAGCAGTACATCCAAGCTAGAAACTTCTGGAAGGCATCCAGATGCCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS GCA 90 bp CTCCAAAACCATTATCTCCATAGTCCAGGTCACTGTCACTATTACTaGCACCGCTGGCAGAGTACGTACACATTCTGGGTGCCTTGTCCT +
Preference number: 5 (lower is better)
Translates to: LQNHYLHSPGHCHYY*HRWQSTYTFWVPCP
Trigger: AGGACAAGGCACCCAGAATGTGTACGTACTCTGCCAGCGGTGGCAGTAATAGTGACAGTGACCTGGACTATGGAGATAATGGTTTTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS CCA 90 bp TTCACCCGCTGTGATCTCCATGCTTGCTGGATTCTTGGAGTCCTCTaGCTTAGACTTGTTCACAGCCACGGAACTTTTGGAGGCTTCATT +
Preference number: 5 (lower is better)
Translates to: FTRCDLHACWILGVL*LRLVHSHGTFGGFI
Trigger: AATGAAGCCTCCAAAAGTTCCGTGGCTGTGAACAAGTCTAAGCCAGAGGACTCCAAGAATCCAGCAAGCATGGAGATCACAGCGGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CCA 90 bp TCGCGGTTGCAGAGGCATCTGGATGCCTTCCAGAAGTTTCTAGCTTaGATGTACTGCTTGTTTCAAAAGTGCTTGGATGCTGAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: SRLQRHLDAFQKFLA*MYCLFQKCLDAESS
Trigger: GGAGGACTCAGCATCCAAGCACTTTTGAAACAAGCAGTACATCCAAGCTAGAAACTTCTGGAAGGCATCCAGATGCCTCTGCAACCGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACGCATGGCCCCCTCACTaGTTCTTTGGGCAACTTCTC +
Preference number: 5 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDAWPPH*FFGQLL
Trigger: GAGAAGTTGCCCAAAGAACAAGTGAGGGGGCCATGC...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CAA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCGCCTGCAGCTCTGGTTaGGAACTGCTTGGAGCAATG +
Preference number: 5 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPACSSG*ELLGAM
Trigger: CATTGCTCCAAGCAGTTCCAAACCAGAGCTGCAGGC...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACGAGGCGTCTGCACACTaGGGCACAGCTTCATCTCTA +
Preference number: 5 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDEASAH*GTASSL
Trigger: TAGAGATGAAGCTGTGCCCAAGTGTGCAGACGCCTC...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGTGTCAGATTTTGCTTTaGATAGATGCCCATGGGTGC +
Preference number: 5 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMCQILL*IDAHGC
Trigger: GCACCCATGGGCATCTATCAAAAGCAAAATCTGACA...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACACCCTGGTTTCGGACTaGGTGGATGAAGGTGCTGGT +
Preference number: 5 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDTLVSD*VDEGAG
Trigger: ACCAGCACCTTCATCCACCAAGTCCGAAACCAGGGT...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACAGCAGGGCATCGGGTTaGAATGACTGCTTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDSRASG*NDCFWG
Trigger: TCCCCAGAAGCAGTCATTCAAACCCGATGCCCTGCT...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAAGACTTCATGAGCACTTaGAGTCCCACTGGAAGGCGA +
Preference number: 5 (lower is better)
Translates to: PCQRNKLWWVACCEFDKEDFMST*SPTGRR
Trigger: TCGCCTTCCAGTGGGACTCAAAGTGCTCATGAAGTC...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACGGAGTCCCTCAGACTTaGGAGGGATCCTCAAAGGCA +
Preference number: 5 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDGVPQT*EGSSKA
Trigger: TGCCTTTGAGGATCCCTCCAAAGTCTGAGGGACTCC...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGGGCTGTGTCTATTCCTaGGTTCAATCTTCAGTTGGT +
Preference number: 5 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMGCVYS*VQSSVG
Trigger: ACCAACTGAAGATTGAACCAAGGAATAGACACAGCC...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGTTTCTTGTGGTTTCCTaGAGTACTGATAGAGCTGCC +
Preference number: 5 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMFLVVS*STDRAA
Trigger: GGCAGCTCTATCAGTACTCAAGGAAACCACAAGAAA...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACCTGGAAGCGGCTGGCTaGCCATTGGGTCTTCAGCAT +
Preference number: 5 (lower is better)
Translates to: RFTECTHKQFEDQDNELHLEAAG*PLGLQH
Trigger: ATGCTGAAGACCCAATGGCAAGCCAGCCGCTTCCAG...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000640590.1
CDS-3UTR CAA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAAGAACCCTCCGATTTTTaGGCAGGCCCTGTTGTAGGT +
Preference number: 5 (lower is better)
Translates to: PCQRNKLWWVACCEFDKEEPSDF*AGPVVG
Trigger: ACCTACAACAGGGCCTGCCAAAAAATCGGAGGGTTC...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS TCA 90 bp ACTGCCAACTTCTCCCTCCAGAGACTCCTGTGTTGCTCCTCAAGCTaGGTCAGCAGATGCTCAATGTATTTATTGGAGTCCATGCATTCC +
Preference number: 5 (lower is better)
Translates to: TANFSLQRLLCCSSS*VSRCSMYLLESMHS
Trigger: GGAATGCATGGACTCCAATAAATACATTGAGCATCTGCTGACTCAGCTTGAGGAGCAACACAGGAGTCTCTGGAGGGAGAAGTTGGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000405974.7
CDS GCA 90 bp GGGCTTTGGCGCCATTCATACCCAGAGCTGGTTTTAGGTGTGGTTTaGTGGAGGAAAGGGATCTTCTCATGGATCTATTATCTACCCCAT +
Preference number: 5 (lower is better)
Translates to: GLWRHSYPELVLGVV*WRKGIFSWIYYLPH
Trigger: ATGGGGTAGATAATAGATCCATGAGAAGATCCCTTTCCTCCAGCAAACCACACCTAAAACCAGCTCTGGGTATGAATGGCGCCAAAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CCA 90 bp CTTTGGCGCCATTCATACCCAGAGCTGGTTTTAGGTGTGGTTTGCTaGAGGAAAGGGATCTTCTCATGGATCTATTATCTACCCCATCCC +
Preference number: 5 (lower is better)
Translates to: LWRHSYPELVLGVVC*RKGIFSWIYYLPHP
Trigger: GGGATGGGGTAGATAATAGATCCATGAGAAGATCCCTTTCCTCCAGCAAACCACACCTAAAACCAGCTCTGGGTATGAATGGCGCCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCATCTGAAAGCTGGAGGTaGAGAGCCATGCGGCCATGG +
Preference number: 5 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSSESWR*RAMRPW
Trigger: CCATGGCCGCATGGCTCTCAACCTCCAGCTTTCAGA...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACTTCAGCAGCGGGGATTaGAATGGGGTCCTTGCTGTT +
Preference number: 5 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDFSSGD*NGVLAV
Trigger: AACAGCAAGGACCCCATTCAAATCCCCGCTGCTGAA...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTTGGCGAGGAGAGGTTTaGGGGACACCTCTCTTCGGA +
Preference number: 5 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLWRGEV*GTPLFG
Trigger: TCCGAAGAGAGGTGTCCCCAAAACCTCTCCTCGCCA...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGGACTTCATGAGCACTTaGAGTCCCACTGGAAGGCGA +
Preference number: 5 (lower is better)
Translates to: LYCPVREISSGGLPAVNLDFMST*SPTGRR
Trigger: TCGCCTTCCAGTGGGACTCAAAGTGCTCATGAAGTC...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTGGGGGCGTAGAAGGCTaGTCTCCTGAGTGTGTACTG +
Preference number: 5 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCGGVEG*SPECVL
Trigger: CAGTACACACTCAGGAGACAAGCCTTCTACGCCCCC...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTGCAGAAGGGGCCTTGTaGGGAGAGCTTTCCGTGGAA +
Preference number: 5 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLAEGAL*GELSVE
Trigger: TTCCACGGAAAGCTCTCCCAACAAGGCCCCTTCTGC...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGTCAAAGGCAACTTACTaGGGCTCCCATGCTGACTGC +
Preference number: 5 (lower is better)
Translates to: LYCPVREISSGGLPAVNLSKATY*GSHADC
Trigger: GCAGTCAGCATGGGAGCCCAAGTAAGTTGCCTTTGA...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAGAGGTGGGCTTTGTTaGCACTTGGCCCTTTTCCAC +
Preference number: 5 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDRGGLC*HLALFH
Trigger: GTGGAAAAGGGCCAAGTGCAAACAAAGCCCACCTCT...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp CCCCACCCATCATTTCTTAAGCGCTCCAGTCCCAGCTCACTAAGGGAAGAGATGATCGTCTTCATCCTCTaGCAAGTTTTCATTTGCCTC +
Preference number: 5 (lower is better)
Translates to: PHPSFLKRSSPSSLREEMIVFIL*QVFICL
Trigger: GAGGCAAATGAAAACTTGCAAGAGGATGAAGACGAT...CATCTCTTCCCTTAGTGAGCTGGGACTGGAGCGCTTAAGAAATGATGGGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CAA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCACTGGAAGCGGCTGGCTaGCCATTGGGTCTTCAGCAT +
Preference number: 5 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSLEAAG*PLGLQH
Trigger: ATGCTGAAGACCCAATGGCAAGCCAGCCGCTTCCAG...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CAA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCACATTCTGGGTGCCTaGTCCTGGGTCCCGGTGGCA +
Preference number: 5 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCHILGA*SWVPVA
Trigger: TGCCACCGGGACCCAGGACAAGGCACCCAGAATGTG...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CAA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCGAACCCTCCGATTTTTaGGCAGGCCCTGTTGTAGGT +
Preference number: 5 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPEPSDF*AGPVVG
Trigger: ACCTACAACAGGGCCTGCCAAAAAATCGGAGGGTTC...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS TCA 90 bp AGAGACGTGAGTGAAGTTTCTGGAGGAGCAGATCAGAAGTGGGTCTaGCTCGCTGTTGGAATAGGATGCTTAGTGTTCGATTCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: RDVSEVSGGADQKWV*LAVGIGCLVFDSAV
Trigger: AACAGCAGAATCGAACACTAAGCATCCTATTCCAACAGCGAGTCAGACCCACTTCTGATCTGCTCCTCCAGAAACTTCACTCACGTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS TCA 90 bp ACTGCCAACTTCTCCCTCCAGAGACTCCTGTGTTGCTCCTCAAGCTaGGTCAGCAGATGCTCAATGTATTTATTGGAGTCCATGTATTCC +
Preference number: 5 (lower is better)
Translates to: TANFSLQRLLCCSSS*VSRCSMYLLESMYS
Trigger: GGAATACATGGACTCCAATAAATACATTGAGCATCTGCTGACTCAGCTTGAGGAGCAACACAGGAGTCTCTGGAGGGAGAAGTTGGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358991.4
ENST00000409213.5
ENST00000409261.6
ENST00000427594.5
CDS GCA 90 bp CGGTGTCGGCAGCCAATGACACGTCTGAAGGACTTTTCTCATCACTaGTCTCTATGTGCAGCTCATCAAACGTTTCATTGTCATCAGTGT +
Preference number: 5 (lower is better)
Translates to: RCRQPMTRLKDFSHH*SLCAAHQTFHCHQC
Trigger: ACACTGATGACAATGAAACGTTTGATGAGCTGCACATAGAGAGCAGTGATGAGAAAAGTCCTTCAGACGTGTCATTGGCTGCCGACACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS GCA 90 bp GCTTCTGAACTCACAGCATCAGTCGCGGTTGCAGAGGCATCTGGATaGCTTCCAGAAGTTTCTAGCTTGGATGTACTGCTTGTTTCAAAA +
Preference number: 5 (lower is better)
Translates to: ASELTASVAVAEASG*LPEVSSLDVLLVSK
Trigger: TTTTGAAACAAGCAGTACATCCAAGCTAGAAACTTCTGGAAGGCATCCAGATGCCTCTGCAACCGCGACTGATGCTGTGAGTTCAGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CCA 90 bp GTGATTTTTCAAGAGTCACCAGGCCAGATGAAGGGAGTAGTGTGGTaGCTTCGGGCTCCATTAGTTTTGATTTCTGAGGTGAAGACTTGC +
Preference number: 5 (lower is better)
Translates to: VIFQESPGQMKGVVW*LRAPLVLISEVKTC
Trigger: GCAAGTCTTCACCTCAGAAATCAAAACTAATGGAGCCCGAAGCCACCACACTACTCCCTTCATCTGGCCTGGTGACTCTTGAAAAATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CCA 90 bp CTGGTGATTTTTCAAGAGTCACCAGGCCAGATGAAGGGAGTAGTGTaGTGGCTTCGGGCTCCATTAGTTTTGATTTCTGAGGTGAAGACT +
Preference number: 5 (lower is better)
Translates to: LVIFQESPGQMKGVV*WLRAPLVLISEVKT
Trigger: AGTCTTCACCTCAGAAATCAAAACTAATGGAGCCCGAAGCCACCACACTACTCCCTTCATCTGGCCTGGTGACTCTTGAAAAATCACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTGCATGGCCCCCTCACTaGTTCTTTGGGCAACTTCTC +
Preference number: 5 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCAWPPH*FFGQLL
Trigger: GAGAAGTTGCCCAAAGAACAAGTGAGGGGGCCATGC...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CAA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAGCATGGCCCCCTCACTaGTTCTTTGGGCAACTTCTC +
Preference number: 5 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSAWPPH*FFGQLL
Trigger: GAGAAGTTGCCCAAAGAACAAGTGAGGGGGCCATGC...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CAA 90 bp ATGTTGCTTTACCATCTTCAACTTCTGGTAGATTCACACAGAGCAGCAGATGAGGCATGGCCCCCTCACTaGTTCTTTGGGCAACTTCTC +
Preference number: 5 (lower is better)
Translates to: MLLYHLQLLVDSHRAADEAWPPH*FFGQLL
Trigger: GAGAAGTTGCCCAAAGAACAAGTGAGGGGGCCATGC...CTCATCTGCTGCTCTGTGTGAATCTACCAGAAGTTGAAGATGGTAAAGCAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427594.5
CDS-3UTR CAA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAACTCTTGCAGCAGCTCTaGGCTGTAAACAAGCAATTC +
Preference number: 5 (lower is better)
Translates to: PCQRNKLWWVACCEFDKELLQQL*AVNKQF
Trigger: GAATTGCTTGTTTACAGCCAAGAGCTGCTGCAAGAG...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCTTGCTGCTGAGGATTTaGTGTCACTGTCCTGGAGCT +
Preference number: 5 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPLLLRI*CHCPGA
Trigger: AGCTCCAGGACAGTGACACAAAATCCTCAGCAGCAA...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACGGAGCTGTGCGGAAGTaGGGCGGAATGTTTTGGAAT +
Preference number: 5 (lower is better)
Translates to: RFTECTHKQFEDQDNELHGAVRK*GGMFWN
Trigger: ATTCCAAAACATTCCGCCCAACTTCCGCACAGCTCC...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTACCCTGGTTTCGGACTaGGTGGATGAAGGTGCTGGT +
Preference number: 5 (lower is better)
Translates to: CRFTECTHKQFEDQDNELTLVSD*VDEGAG
Trigger: ACCAGCACCTTCATCCACCAAGTCCGAAACCAGGGT...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCAGCAGGGCATCGGGTTaGAATGACTGCTTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRISRASG*NDCFWG
Trigger: TCCCCAGAAGCAGTCATTCAAACCCGATGCCCTGCT...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTCTTCGGAGAGACCTTaGGAGGCCCCAGAGCCATTA +
Preference number: 5 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCSSERP*EAPEPL
Trigger: TAATGGCTCTGGGGCCTCCAAAGGTCTCTCCGAAGA...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCTCCTCTGGCTTAGACTaGTTCACAGCCACGGAACTT +
Preference number: 5 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPSSGLD*FTATEL
Trigger: AAGTTCCGTGGCTGTGAACAAGTCTAAGCCAGAGGA...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACATGCTTGCTGGATTCTaGGAGTCCTCTGGCTTAGAC +
Preference number: 5 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDMLAGF*ESSGLD
Trigger: GTCTAAGCCAGAGGACTCCAAGAATCCAGCAAGCAT...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCTGCCGGGTAAGAGAATaGCCTCTCTCGGCGGTATTG +
Preference number: 5 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRICRVRE*PLSAVL
Trigger: CAATACCGCCGAGAGAGGCAATTCTCTTACCCGGCA...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTTGCCGGGTAAGAGAATaGCCTCTCTCGGCGGTATTG +
Preference number: 5 (lower is better)
Translates to: CRFTECTHKQFEDQDNELCRVRE*PLSAVL
Trigger: CAATACCGCCGAGAGAGGCAATTCTCTTACCCGGCA...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTGGAGTCCCTCAGACTTaGGAGGGATCCTCAAAGGCA +
Preference number: 5 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLGVPQT*EGSSKA
Trigger: TGCCTTTGAGGATCCCTCCAAAGTCTGAGGGACTCC...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACCCACAGAGGTGGGCTTaGTTTGCACTTGGCCCTTTT +
Preference number: 5 (lower is better)
Translates to: RFTECTHKQFEDQDNELHPQRWA*FALGPF
Trigger: AAAAGGGCCAAGTGCAAACAAAGCCCACCTCTGTGG...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACAGCATGTCTGAGGCCTaGGCTCTGCTTCATTCTGCT +
Preference number: 5 (lower is better)
Translates to: RFTECTHKQFEDQDNELHSMSEA*ALLHSA
Trigger: AGCAGAATGAAGCAGAGCCAAGGCCTCAGACATGCT...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000640590.1
CDS-3UTR CAA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAATTGCCTGCTGTGAATTaGACAAGGAAGGCTCTGGTA +
Preference number: 5 (lower is better)
Translates to: PCQRNKLWWVACCEFDKELPAVN*TRKALV
Trigger: TACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAA...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CAA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAAGTACCCACAAACAATTaGAGGACCAGGACAACGAAC +
Preference number: 5 (lower is better)
Translates to: PCQRNKLWWVACCEFDKEVPTNN*RTRTTN
Trigger: GTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTAC...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CAA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACGAACCCTCCGATTTTTaGGCAGGCCCTGTTGTAGGT +
Preference number: 5 (lower is better)
Translates to: RFTECTHKQFEDQDNELHEPSDF*AGPVVG
Trigger: ACCTACAACAGGGCCTGCCAAAAAATCGGAGGGTTC...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS TCA 90 bp CCGAAGACCTGGAATTACTCTGGCATGATATATTGTGTGTTGGTTTaGCCAGCTTTTGCTGCTGAGGATTTTGTGTCACTGTCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: PKTWNYSGMIYCVLV*PAFAAEDFVSLSWS
Trigger: GCTCCAGGACAGTGACACAAAATCCTCAGCAGCAAAAGCTGGTCAAACCAACACACAATATATCATGCCAGAGTAATTCCAGGTCTTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS TCA 90 bp GATCTGATCGTAATTCAAAGAGGGGCCCTGAGCTCTCAGTCTTCATaGATCGTGAGAGTTTCCCAGGAGCTAAGGCTGGTGATTTTTCAA +
Preference number: 5 (lower is better)
Translates to: DLIVIQRGALSSQSS*IVRVSQELRLVIFQ
Trigger: TTGAAAAATCACCAGCCTTAGCTCCTGGGAAACTCTCACGATTCATGAAGACTGAGAGCTCAGGGCCCCTCTTTGAATTACGATCAGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACCAGAGCTTGAACAACTaGGTTGGCTACCTCATCAAG +
Preference number: 5 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDQSLNN*VGYLIK
Trigger: CTTGATGAGGTAGCCAACCAAGTTGTTCAAGCTCTG...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CAA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTACTCGCTGCAGGTGCTaGAAAGAGACAGTTCACTGC +
Preference number: 5 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCTRCRC*KETVHC
Trigger: GCAGTGAACTGTCTCTTTCAAGCACCTGCAGCGAGT...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CAA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTACTCGCTGCAGGTGCTaGAAAGAGACAGTTCACTGC +
Preference number: 5 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLTRCRC*KETVHC
Trigger: GCAGTGAACTGTCTCTTTCAAGCACCTGCAGCGAGT...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CAA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTAGCTGCTGGCGCAACTaGTCAGCTTTTCAGGCCTTT +
Preference number: 5 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLSCWRN*SAFQAF
Trigger: AAAGGCCTGAAAAGCTGACAAGTTGCGCCAGCAGCT...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTTCTGAAAGCTGGAGGTaGAGAGCCATGCGGCCATGG +
Preference number: 5 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCSESWR*RAMRPW
Trigger: CCATGGCCGCATGGCTCTCAACCTCCAGCTTTCAGA...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCCTCTTGCAGCAGCTCTaGGCTGTAAACAAGCAATTC +
Preference number: 5 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPLLQQL*AVNKQF
Trigger: GAATTGCTTGTTTACAGCCAAGAGCTGCTGCAAGAG...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGGTTGGGCGGAATGTTTaGGAATGTGTGGATCTGATC +
Preference number: 5 (lower is better)
Translates to: LYCPVREISSGGLPAVNLVGRNV*ECVDLI
Trigger: GATCAGATCCACACATTCCAAAACATTCCGCCCAAC...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAGGAGCTGTGCGGAAGTaGGGCGGAATGTTTTGGAAT +
Preference number: 5 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSGAVRK*GGMFWN
Trigger: ATTCCAAAACATTCCGCCCAACTTCCGCACAGCTCC...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGACTCAATGGCAGGCCTaGACCGTGACCCTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQATQWQA*TVTLES
Trigger: AGACTCCAGGGTCACGGTCAAGGCCTGCCATTGAGT...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTTGGGGTCCCAAGTGTTaGGCGAGGAGAGGTTTTGGG +
Preference number: 5 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCWGPKC*ARRGFG
Trigger: CCCAAAACCTCTCCTCGCCAAACACTTGGGACCCCA...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCGGGCTGTTATGGCTTTaGGCGGGTGATGAGGATGAT +
Preference number: 5 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRIGLLWL*AGDEDD
Trigger: ATCATCCTCATCACCCGCCAAAAGCCATAACAGCCC...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTTCAAAGGCAACTTACTaGGGCTCCCATGCTGACTGC +
Preference number: 5 (lower is better)
Translates to: CRFTECTHKQFEDQDNELSKATY*GSHADC
Trigger: GCAGTCAGCATGGGAGCCCAAGTAAGTTGCCTTTGA...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCCTTCAGGGCAGTCTGTaGGGGTGGGTGGGCAACTGC +
Preference number: 5 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSLQGSL*GWVGNC
Trigger: GCAGTTGCCCACCCACCCCAACAGACTGCCCTGAAG...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCAGAGGTGGGCTTTGTTaGCACTTGGCCCTTTTCCAC +
Preference number: 5 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRIRGGLC*HLALFH
Trigger: GTGGAAAAGGGCCAAGTGCAAACAAAGCCCACCTCT...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAATTACCAGGGAGTCTTTaGGTACTTCCATATCGGCTT +
Preference number: 5 (lower is better)
Translates to: PCQRNKLWWVACCEFDKELPGSL*VLPYRL
Trigger: AAGCCGATATGGAAGTACCAAAAGACTCCCTGGTAA...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACGTTCTCATCTGGCAGTaGGATTCTATGATGTGGCTC +
Preference number: 5 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDVLIWQ*DSMMWL
Trigger: GAGCCACATCATAGAATCCAACTGCCAGATGAGAAC...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CAA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACTTCACGTTCAAGGGTTaGGGCTCTCATGGAAGAAAC +
Preference number: 5 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDFTFKG*GSHGRN
Trigger: GTTTCTTCCATGAGAGCCCAAACCCTTGAACGTGAA...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CAA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCTTCACGTTCAAGGGTTaGGGCTCTCATGGAAGAAAC +
Preference number: 5 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPFTFKG*GSHGRN
Trigger: GTTTCTTCCATGAGAGCCCAAACCCTTGAACGTGAA...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CAA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTAGCATGTCTGAGGCCTaGGCTCTGCTTCATTCTGCT +
Preference number: 5 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLSMSEA*ALLHSA
Trigger: AGCAGAATGAAGCAGAGCCAAGGCCTCAGACATGCT...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CAA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAGCATGTCTGAGGCCTaGGCTCTGCTTCATTCTGCT +
Preference number: 5 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSSMSEA*ALLHSA
Trigger: AGCAGAATGAAGCAGAGCCAAGGCCTCAGACATGCT...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CAA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCAGCATGTCTGAGGCCTaGGCTCTGCTTCATTCTGCT +
Preference number: 5 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRISMSEA*ALLHSA
Trigger: AGCAGAATGAAGCAGAGCCAAGGCCTCAGACATGCT...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000640590.1
CDS-3UTR CAA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACTTGCCTGCTGTGAATTaGACAAGGAAGGCTCTGGTA +
Preference number: 5 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDLPAVN*TRKALV
Trigger: TACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAA...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CAA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACATAAGCTCTGGTGGGTaGCCTGCTGTGAATTTGACA +
Preference number: 5 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDISSGG*PAVNLT
Trigger: TGTCAAATTCACAGCAGGCAACCCACCAGAGCTTAT...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CAA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCATAAGCTCTGGTGGGTaGCCTGCTGTGAATTTGACA +
Preference number: 5 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPISSGG*PAVNLT
Trigger: TGTCAAATTCACAGCAGGCAACCCACCAGAGCTTAT...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CAA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACATAAGCTCTGGTGGGTaGCCTGCTGTGAATTTGACA +
Preference number: 5 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDISSGG*PAVNLT
Trigger: TGTCAAATTCACAGCAGGCAACCCACCAGAGCTTAT...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CAA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACGTACCCACAAACAATTaGAGGACCAGGACAACGAAC +
Preference number: 5 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDVPTNN*RTRTTN
Trigger: GTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTAC...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CAA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCGTACCCACAAACAATTaGAGGACCAGGACAACGAAC +
Preference number: 5 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPVPTNN*RTRTTN
Trigger: GTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTAC...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS TCA 90 bp TTGATGGAAATCTCATTTCTGGTAACAGTGACAACCCCAGTCTGGTaGGAGCTGAATTCAATGGGCTCACCGTCTTCCGCATCAAATATC +
Preference number: 5 (lower is better)
Translates to: LMEISFLVTVTTPVW*ELNSMGSPSSASNI
Trigger: GATATTTGATGCGGAAGACGGTGAGCCCATTGAATTCAGCTCTCACCAGACTGGGGTTGTCACTGTTACCAGAAATGAGATTTCCATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS TCA 90 bp CTCTGGCATGATATATTGTGTGTTGGTTTGACCAGCTTTTGCTGCTaGGGATTTTGTGTCACTGTCCTGGAGCTGAAAGATTCAGTGGAC +
Preference number: 5 (lower is better)
Translates to: LWHDILCVGLTSFCC*GFCVTVLELKDSVD
Trigger: GTCCACTGAATCTTTCAGCTCCAGGACAGTGACACAAAATCCTCAGCAGCAAAAGCTGGTCAAACCAACACACAATATATCATGCCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS TCA 90 bp TTGATAGATGCCCATGGGTGCCGAAGACCTGGAATTACTCTGGCATaGTATATTGTGTGTTGGTTTGACCAGCTTTTGCTGCTGAGGATT +
Preference number: 5 (lower is better)
Translates to: LIDAHGCRRPGITLA*YIVCWFDQLLLLRI
Trigger: AATCCTCAGCAGCAAAAGCTGGTCAAACCAACACACAATATATCATGCCAGAGTAATTCCAGGTCTTCGGCACCCATGGGCATCTATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAAAATTTCCTCCCGCGGTaGGTTATCCTCTGTTTATTT +
Preference number: 5 (lower is better)
Translates to: PCQRNKLWWVACCEFDKENFLPR*VILCLF
Trigger: AAATAAACAGAGGATAACCAACCGCGGGAGGAAATT...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CAA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTGCCTGCAGCTCTGGTTaGGAACTGCTTGGAGCAATG +
Preference number: 5 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCACSSG*ELLGAM
Trigger: CATTGCTCCAAGCAGTTCCAAACCAGAGCTGCAGGC...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACGAAAGTGTTTTCTGTTaGTCTCCCAGCCAAACAGAC +
Preference number: 5 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDESVFC*SPSQTD
Trigger: GTCTGTTTGGCTGGGAGACAAACAGAAAACACTTTC...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTTCAGTATGTTCTGCCTaGGGTCCAGCAGGAGTTGAA +
Preference number: 5 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLSVCSA*GPAGVE
Trigger: TTCAACTCCTGCTGGACCCAAGGCAGAACATACTGA...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTCAGTATGTTCTGCCTaGGGTCCAGCAGGAGTTGAA +
Preference number: 5 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCSVCSA*GPAGVE
Trigger: TTCAACTCCTGCTGGACCCAAGGCAGAACATACTGA...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAGAAAGTATAGTCTCTaGCAGCAGCTCTTGGCTGTA +
Preference number: 5 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDRKYSL*QQLLAV
Trigger: TACAGCCAAGAGCTGCTGCAAGAGACTATACTTTCT...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACAGAAAGTATAGTCTCTaGCAGCAGCTCTTGGCTGTA +
Preference number: 5 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDRKYSL*QQLLAV
Trigger: TACAGCCAAGAGCTGCTGCAAGAGACTATACTTTCT...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCATTGCTGCTGAGGATTTaGTGTCACTGTCCTGGAGCT +
Preference number: 5 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSLLLRI*CHCPGA
Trigger: AGCTCCAGGACAGTGACACAAAATCCTCAGCAGCAA...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACCTCTGGCATGATATATaGTGTGTTGGTTTGACCAGC +
Preference number: 5 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDLWHDI*CVGLTS
Trigger: GCTGGTCAAACCAACACACAATATATCATGCCAGAG...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGTCTTCGGAGAGACCTTaGGAGGCCCCAGAGCCATTA +
Preference number: 5 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQASSERP*EAPEPL
Trigger: TAATGGCTCTGGGGCCTCCAAAGGTCTCTCCGAAGA...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAGCCACGGAACTTTaGGAGGCTTCATTTAAACTG +
Preference number: 5 (lower is better)
Translates to: LYCPVREISSGGLPAVNLTATEL*EASFKL
Trigger: CAGTTTAAATGAAGCCTCCAAAAGTTCCGTGGCTGT...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTCCTCTGGCTTAGACTaGTTCACAGCCACGGAACTT +
Preference number: 5 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCSSGLD*FTATEL
Trigger: AAGTTCCGTGGCTGTGAACAAGTCTAAGCCAGAGGA...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTATGCTTGCTGGATTCTaGGAGTCCTCTGGCTTAGAC +
Preference number: 5 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCMLAGF*ESSGLD
Trigger: GTCTAAGCCAGAGGACTCCAAGAATCCAGCAAGCAT...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTGGAGCAGAAGGGGCCTaGTTGGGAGAGCTTTCCGTG +
Preference number: 5 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLGAEGA*LGELSV
Trigger: CACGGAAAGCTCTCCCAACAAGGCCCCTTCTGCTCC...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTCCAAGTACAGCCACATaGGCACTGGGGCACTCTCCC +
Preference number: 5 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLPSTAT*ALGHSP
Trigger: GGGAGAGTGCCCCAGTGCCAATGTGGCTGTACTTGG...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGGCTGACTTGGTGTCCTaGATAAGCTCATTTTCTGTC +
Preference number: 5 (lower is better)
Translates to: LYCPVREISSGGLPAVNLADLVS*ISSFSV
Trigger: GACAGAAAATGAGCTTATCAAGGACACCAAGTCAGC...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACTTTCTTGTGGTTTCCTaGAGTACTGATAGAGCTGCC +
Preference number: 5 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDFLVVS*STDRAA
Trigger: GGCAGCTCTATCAGTACTCAAGGAAACCACAAGAAA...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACTTACCAGGGAGTCTTTaGGTACTTCCATATCGGCTT +
Preference number: 5 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDLPGSL*VLPYRL
Trigger: AAGCCGATATGGAAGTACCAAAAGACTCCCTGGTAA...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp CCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACAAGGAATTCTGTCCTTCAACCTaGTTCAGAGAGTTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: PCQRNKLWWVACCEFDKEFCPST*FREFFS
Trigger: AGAGAAGAACTCTCTGAACAAGGTTGAAGGACAGAA...TTCCTTGTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CAA 90 bp GCAGAAGAGGAGAAGAGCTCTGTGCTGATGCTTGTCCAAAGGTCAATTGACAGCCAAATCAACAGAAAATaGCCCTCTGTATTCATCAGG +
Preference number: 5 (lower is better)
Translates to: AEEEKSSVLMLVQRSIDSQINRK*PSVFIR
Trigger: CCTGATGAATACAGAGGGCAATTTTCTGTTGATTTG...GCTGTCAATTGACCTTTGGACAAGCATCAGCACAGAGCTCTTCTCCTCTTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427594.5
CDS-3UTR CAA 90 bp GCAGAAGAGGAGAAGAGCTCTGTGCTGATGCTTGTCCAAAGGTCAATTGACAGCGCCTTTCTTTCCAGTTaGCTACATAATTGGTTTTGG +
Preference number: 5 (lower is better)
Translates to: AEEEKSSVLMLVQRSIDSAFLSS*LHNWFW
Trigger: CCAAAACCAATTATGTAGCAAACTGGAAAGAAAGGC...GCTGTCAATTGACCTTTGGACAAGCATCAGCACAGAGCTCTTCTCCTCTTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427594.5
CDS-3UTR CAA 90 bp GCAGAAGAGGAGAAGAGCTCTGTGCTGATGCTTGTCCAAAGGTCAATTGACAGCTTACAGATGAGCAAATaGAGACCCAAAAGGGTCAAA +
Preference number: 5 (lower is better)
Translates to: AEEEKSSVLMLVQRSIDSLQMSK*RPKRVK
Trigger: TTTGACCCTTTTGGGTCTCAATTTGCTCATCTGTAA...GCTGTCAATTGACCTTTGGACAAGCATCAGCACAGAGCTCTTCTCCTCTTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427594.5
CDS TCA 90 bp TCTGTACTGCTGCTTTCACTCCTCGAATCCTCATCAACCACCATGTaGAGATCTTCCAAAGCTTCCTTATGTTTTCTCTCTTCCTCTGAC +
Preference number: 5 (lower is better)
Translates to: SVLLLSLLESSSTTM*RSSKASLCFLSSSD
Trigger: GTCAGAGGAAGAGAGAAAACATAAGGAAGCTTTGGAAGATCTTCACATGGTGGTTGATGAGGATTCGAGGAGTGAAAGCAGCAGTACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CAA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTGAATGCGGAGCAAGTTaGCGGAGACTTGCTCCCTGG +
Preference number: 5 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLECGAS*RRLAPW
Trigger: CCAGGGAGCAAGTCTCCGCAAACTTGCTCCGCATTC...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CAA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCACAGAGCTTGAACAACTaGGTTGGCTACCTCATCAAG +
Preference number: 5 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSQSLNN*VGYLIK
Trigger: CTTGATGAGGTAGCCAACCAAGTTGTTCAAGCTCTG...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CAA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCCAGAGCTTGAACAACTaGGTTGGCTACCTCATCAAG +
Preference number: 5 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRIQSLNN*VGYLIK
Trigger: CTTGATGAGGTAGCCAACCAAGTTGTTCAAGCTCTG...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CAA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGTTCAGCAGCGGGGATTaGAATGGGGTCCTTGCTGTT +
Preference number: 5 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQAFSSGD*NGVLAV
Trigger: AACAGCAAGGACCCCATTCAAATCCCCGCTGCTGAA...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTTGGCGAGGAGAGGTTTaGGGGACACCTCTCTTCGGA +
Preference number: 5 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLWRGEV*GTPLFG
Trigger: TCCGAAGAGAGGTGTCCCCAAAACCTCTCCTCGCCA...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCGGTTTTAGGTGTGGTTaGCTGGAGGAAAGGGATCTT +
Preference number: 5 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRIGFRCG*LEERDL
Trigger: AAGATCCCTTTCCTCCAGCAAACCACACCTAAAACC...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCGCAGAAGGGGCCTTGTaGGGAGAGCTTTCCGTGGAA +
Preference number: 5 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSAEGAL*GELSVE
Trigger: TTCCACGGAAAGCTCTCCCAACAAGGCCCCTTCTGC...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCGCTTGGATGTACTGCTaGTTTCAAAAGTGCTTGGAT +
Preference number: 5 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPAWMYC*FQKCLD
Trigger: ATCCAAGCACTTTTGAAACAAGCAGTACATCCAAGC...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGCCAGAAGTTTCTAGCTaGGATGTACTGCTTGTTTCA +
Preference number: 5 (lower is better)
Translates to: LYCPVREISSGGLPAVNLPEVSS*DVLLVS
Trigger: TGAAACAAGCAGTACATCCAAGCTAGAAACTTCTGG...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTGTTCTCATCTGGCAGTaGGATTCTATGATGTGGCTC +
Preference number: 5 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLVLIWQ*DSMMWL
Trigger: GAGCCACATCATAGAATCCAACTGCCAGATGAGAAC...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CAA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTGTTCTCATCTGGCAGTaGGATTCTATGATGTGGCTC +
Preference number: 5 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCVLIWQ*DSMMWL
Trigger: GAGCCACATCATAGAATCCAACTGCCAGATGAGAAC...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CAA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTTTCACGTTCAAGGGTTaGGGCTCTCATGGAAGAAAC +
Preference number: 5 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLFTFKG*GSHGRN
Trigger: GTTTCTTCCATGAGAGCCCAAACCCTTGAACGTGAA...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000639875.1
CDS-3UTR CAA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTTCACGTTCAAGGGTTaGGGCTCTCATGGAAGAAAC +
Preference number: 5 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCFTFKG*GSHGRN
Trigger: GTTTCTTCCATGAGAGCCCAAACCCTTGAACGTGAA...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CAA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGAGCATGTCTGAGGCCTaGGCTCTGCTTCATTCTGCT +
Preference number: 5 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQASMSEA*ALLHSA
Trigger: AGCAGAATGAAGCAGAGCCAAGGCCTCAGACATGCT...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000640590.1
CDS-3UTR CAA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTCTGGAAGCGGCTGGCTaGCCATTGGGTCTTCAGCAT +
Preference number: 5 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLLEAAG*PLGLQH
Trigger: ATGCTGAAGACCCAATGGCAAGCCAGCCGCTTCCAG...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000640590.1
CDS-3UTR CAA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCACTCAAAGATTCCAAGTaGTCTACCCCAGGCCTATCT +
Preference number: 5 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSLKDSK*STPGLS
Trigger: AGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAG...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000639875.1
CDS-3UTR CAA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCCTCAAAGATTCCAAGTaGTCTACCCCAGGCCTATCT +
Preference number: 5 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRILKDSK*STPGLS
Trigger: AGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAG...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CAA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTTTGCCTGCTGTGAATTaGACAAGGAAGGCTCTGGTA +
Preference number: 5 (lower is better)
Translates to: CRFTECTHKQFEDQDNELLPAVN*TRKALV
Trigger: TACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAA...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CAA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTTTGCCTGCTGTGAATTaGACAAGGAAGGCTCTGGTA +
Preference number: 5 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLLPAVN*TRKALV
Trigger: TACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAA...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
CDS-3UTR CAA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCATTGCCTGCTGTGAATTaGACAAGGAAGGCTCTGGTA +
Preference number: 5 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSLPAVN*TRKALV
Trigger: TACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAA...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
CDS-3UTR CAA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAATAAGCTCTGGTGGGTaGCCTGCTGTGAATTTGACA +
Preference number: 5 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSISSGG*PAVNLT
Trigger: TGTCAAATTCACAGCAGGCAACCCACCAGAGCTTAT...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
CDS-3UTR CAA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCGTACCCACAAACAATTaGAGGACCAGGACAACGAAC +
Preference number: 5 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRIVPTNN*RTRTTN
Trigger: GTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTAC...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS TCA 90 bp CTTATCAACTCTGTTCAAGAGTTCCGTCATGAAGGTGTCTTTCGTTaGACATGCAACAGGGCTGTGTCTATTCCTTGGTTCAATCTTCAG +
Preference number: 5 (lower is better)
Translates to: LINSVQEFRHEGVFR*TCNRAVSIPWFNLQ
Trigger: CTGAAGATTGAACCAAGGAATAGACACAGCCCTGTTGCATGTTCAACGAAAGACACCTTCATGACGGAACTCTTGAACAGAGTTGATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000409261.6
ENST00000473859.1
CDS TCA 90 bp AGAAGAGGAGAAGAGCTCTGTGCTGATGCTTGTCCAAAGGTCAATTaGCAGCTTTTCTCATCTTGTTACATTTTCCTCCTTCTGGAGAAC +
Preference number: 5 (lower is better)
Translates to: RRGEELCADACPKVN*QLFSSCYIFLLLEN
Trigger: GTTCTCCAGAAGGAGGAAAATGTAACAAGATGAGAAAAGCTGTCAATTGACCTTTGGACAAGCATCAGCACAGAGCTCTTCTCCTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427594.5
CDS GCA 90 bp GTGGGTCTGACTCGCTGTTGGAATAGGATGCTTAGTGTTCGATTCTaGTGTTCCAAATCAAACACTCTTGTTTTCAACTTCACACATTCC +
Preference number: 5 (lower is better)
Translates to: VGLTRCWNRMLSVRF*CSKSNTLVFNFTHS
Trigger: GGAATGTGTGAAGTTGAAAACAAGAGTGTTTGATTTGGAACAGCAGAATCGAACACTAAGCATCCTATTCCAACAGCGAGTCAGACCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS GCA 90 bp CATCTGGCAGTTGGATTCTATGATGTGGCTCTGAAATACAGAATCTaGAACTGCATCGTCTTCATCCTCTTGCAAGTTTTCATTTGCCTC +
Preference number: 5 (lower is better)
Translates to: HLAVGFYDVALKYRI*NCIVFILLQVFICL
Trigger: GAGGCAAATGAAAACTTGCAAGAGGATGAAGACGATGCAGTTGCAGATTCTGTATTTCAGAGCCACATCATAGAATCCAACTGCCAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CAA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCATCCTCTGTTTATTTTaGAAGCATTCAAAGGCCACG +
Preference number: 5 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPILCLF*KHSKAT
Trigger: CGTGGCCTTTGAATGCTTCAAAAATAAACAGAGGAT...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CAA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACATCCTCTGTTTATTTTaGAAGCATTCAAAGGCCACG +
Preference number: 5 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDILCLF*KHSKAT
Trigger: CGTGGCCTTTGAATGCTTCAAAAATAAACAGAGGAT...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CAA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCTATTGTGAGTCTATTTaGGTACAGGCACTTGAGGTA +
Preference number: 5 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPYCESI*VQALEV
Trigger: TACCTCAAGTGCCTGTACCAAAATAGACTCACAATA...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CAA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCGCATGGCCCCCTCACTaGTTCTTTGGGCAACTTCTC +
Preference number: 5 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSAWPPH*FFGQLL
Trigger: GAGAAGTTGCCCAAAGAACAAGTGAGGGGGCCATGC...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CAA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTTGAGTAAGCAGAGCTaGAACAACTTGGTTGGCTAC +
Preference number: 5 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCLSKQS*NNLVGY
Trigger: GTAGCCAACCAAGTTGTTCAAGCTCTGCTTACTCAA...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CAA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTTTGAGTAAGCAGAGCTaGAACAACTTGGTTGGCTAC +
Preference number: 5 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLLSKQS*NNLVGY
Trigger: GTAGCCAACCAAGTTGTTCAAGCTCTGCTTACTCAA...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CAA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTTGGTTTGACCAGCTTTaGCTGCTGAGGATTTTGTGT +
Preference number: 5 (lower is better)
Translates to: CRFTECTHKQFEDQDNELWFDQL*LLRILC
Trigger: ACACAAAATCCTCAGCAGCAAAAGCTGGTCAAACCA...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCACTCTGGCATGATATATaGTGTGTTGGTTTGACCAGC +
Preference number: 5 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSLWHDI*CVGLTS
Trigger: GCTGGTCAAACCAACACACAATATATCATGCCAGAG...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTTGTCAGATTTTGCTTTaGATAGATGCCCATGGGTGC +
Preference number: 5 (lower is better)
Translates to: CRFTECTHKQFEDQDNELCQILL*IDAHGC
Trigger: GCACCCATGGGCATCTATCAAAAGCAAAATCTGACA...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTCGGGCTCCATTAGTTTaGATTTCTGAGGTGAAGACT +
Preference number: 5 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLRAPLV*ISEVKT
Trigger: AGTCTTCACCTCAGAAATCAAAACTAATGGAGCCCG...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTTTCTCATGAGCACTTaGACAACCATGAGGGCTGTT +
Preference number: 5 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCFLMST*TTMRAV
Trigger: AACAGCCCTCATGGTTGTCAAAGTGCTCATGAGAAA...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCATTTCTCATGAGCACTTaGACAACCATGAGGGCTGTT +
Preference number: 5 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSFLMST*TTMRAV
Trigger: AACAGCCCTCATGGTTGTCAAAGTGCTCATGAGAAA...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAACAGCCACGGAACTTTaGGAGGCTTCATTTAAACTG +
Preference number: 5 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSTATEL*EASFKL
Trigger: CAGTTTAAATGAAGCCTCCAAAAGTTCCGTGGCTGT...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTGCTGACTTGGTGTCCTaGATAAGCTCATTTTCTGTC +
Preference number: 5 (lower is better)
Translates to: CRFTECTHKQFEDQDNELADLVS*ISSFSV
Trigger: GACAGAAAATGAGCTTATCAAGGACACCAAGTCAGC...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACTGGTTCAATCTTCAGTaGGTTGTAAATGTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDWFNLQ*VVNVLW
Trigger: CCACAAGACATTTACAACCAACTGAAGATTGAACCA...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTGCAGGAAGCATTACTaGATCCACTTTCTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCCRKHY*IHFLSV
Trigger: CACAGACAGAAAGTGGATCAAGTAATGCTTCCTGCA...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp AACAAGTGCAGAAGAGGAGAAGAGCTCTGTGCTGATGCTTGTCCAAAGGTCAATCCCCAGTATTTAATTTaGGCTGTTCCCAACAGAAAT +
Preference number: 5 (lower is better)
Translates to: NKCRRGEELCADACPKVNPQYLI*AVPNRN
Trigger: ATTTCTGTTGGGAACAGCCAAAATTAAATACTGGGG...ATTGACCTTTGGACAAGCATCAGCACAGAGCTCTTCTCCTCTTCTGCACTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427594.5
CDS-3UTR CAA 90 bp ATGTTGCTTTACCATCTTCAACTTCTGGTAGATTCACACAGAGCAGCAGATGAGTATCTTAACTTCCTTTaGCCAGCCAAGTTCCCCAGT +
Preference number: 5 (lower is better)
Translates to: MLLYHLQLLVDSHRAADEYLNFL*PAKFPS
Trigger: ACTGGGGAACTTGGCTGGCAAAAGGAAGTTAAGATA...CTCATCTGCTGCTCTGTGTGAATCTACCAGAAGTTGAAGATGGTAAAGCAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427594.5
CDS-3UTR CAA 90 bp ATGTTGCTTTACCATCTTCAACTTCTGGTAGATTCACACAGAGCAGCAGATGAGGAGCCAAGAGCAATCTaGGTTATATGTTCACAGCAG +
Preference number: 5 (lower is better)
Translates to: MLLYHLQLLVDSHRAADEEPRAI*VICSQQ
Trigger: CTGCTGTGAACATATAACCAAGATTGCTCTTGGCTC...CTCATCTGCTGCTCTGTGTGAATCTACCAGAAGTTGAAGATGGTAAAGCAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427594.5
CDS-3UTR CAA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACATCCTCTGTTTATTTTaGAAGCATTCAAAGGCCACG +
Preference number: 5 (lower is better)
Translates to: RFTECTHKQFEDQDNELHILCLF*KHSKAT
Trigger: CGTGGCCTTTGAATGCTTCAAAAATAAACAGAGGAT...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CAA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCAATTTCCTCCCGCGGTaGGTTATCCTCTGTTTATTT +
Preference number: 5 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRINFLPR*VILCLF
Trigger: AAATAAACAGAGGATAACCAACCGCGGGAGGAAATT...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CAA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTAATTTCCTCCCGCGGTaGGTTATCCTCTGTTTATTT +
Preference number: 5 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLNFLPR*VILCLF
Trigger: AAATAAACAGAGGATAACCAACCGCGGGAGGAAATT...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CAA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGCAGAGCTTGAACAACTaGGTTGGCTACCTCATCAAG +
Preference number: 5 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQAQSLNN*VGYLIK
Trigger: CTTGATGAGGTAGCCAACCAAGTTGTTCAAGCTCTG...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CAA 90 bp GGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGGTGCACCCATTTCAAGGCCGATTTaGTATTTAGTTGGTGTTCGT +
Preference number: 5 (lower is better)
Translates to: GRLWYCNSLLLSLSSGAPISRPI*YLVGVR
Trigger: ACGAACACCAACTAAATACAAAATCGGCCTTGAAAT...GGGTGCACCGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CAA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCACTCGCTGCAGGTGCTaGAAAGAGACAGTTCACTGC +
Preference number: 5 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSTRCRC*KETVHC
Trigger: GCAGTGAACTGTCTCTTTCAAGCACCTGCAGCGAGT...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CAA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTAAAATGTGGCTTTCCTaGATACGAGTTGGAGGTAGT +
Preference number: 5 (lower is better)
Translates to: CRFTECTHKQFEDQDNELKMWLS*IRVGGS
Trigger: ACTACCTCCAACTCGTATCAAGGAAAGCCACATTTT...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACTCATCAAACGTTTCATaGTCATCAGTGTCTGAAAGC +
Preference number: 5 (lower is better)
Translates to: RFTECTHKQFEDQDNELHSSNVS*SSVSES
Trigger: GCTTTCAGACACTGATGACAATGAAACGTTTGATGA...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTGTTGGGCGGAATGTTTaGGAATGTGTGGATCTGATC +
Preference number: 5 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCVGRNV*ECVDLI
Trigger: GATCAGATCCACACATTCCAAAACATTCCGCCCAAC...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATGGGCTGTTATGGCTTTaGGCGGGTGATGAGGATGAT +
Preference number: 5 (lower is better)
Translates to: CEFDKEGSGTAIVYCYLYGLLWL*AGDEDD
Trigger: ATCATCCTCATCACCCGCCAAAAGCCATAACAGCCC...ATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTGCTTGGATGTACTGCTaGTTTCAAAAGTGCTTGGAT +
Preference number: 5 (lower is better)
Translates to: CRFTECTHKQFEDQDNELAWMYC*FQKCLD
Trigger: ATCCAAGCACTTTTGAAACAAGCAGTACATCCAAGC...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCACCAGAAGTTTCTAGCTaGGATGTACTGCTTGTTTCA +
Preference number: 5 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSPEVSS*DVLLVS
Trigger: TGAAACAAGCAGTACATCCAAGCTAGAAACTTCTGG...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTGGGCTTTGTTTGCACTaGGCCCTTTTCCACATTTTC +
Preference number: 5 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCGLCLH*ALFHIF
Trigger: GAAAATGTGGAAAAGGGCCAAGTGCAAACAAAGCCC...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCCCACAGAGGTGGGCTTaGTTTGCACTTGGCCCTTTT +
Preference number: 5 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSPQRWA*FALGPF
Trigger: AAAAGGGCCAAGTGCAAACAAAGCCCACCTCTGTGG...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGACTTGGTTGTAAATGTCTaGTGGTGTTCTCCGATTATT +
Preference number: 5 (lower is better)
Translates to: LLPCQRNKLWWVACCEFDLVVNV*WCSPII
Trigger: AATAATCGGAGAACACCACAAGACATTTACAACCAA...GTCAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCATCGTCTTCATCCTCTaGCAAGTTTTCATTTGCCTC +
Preference number: 5 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRIIVFIL*QVFICL
Trigger: GAGGCAAATGAAAACTTGCAAGAGGATGAAGACGAT...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CAA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTATCGTCTTCATCCTCTaGCAAGTTTTCATTTGCCTC +
Preference number: 5 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLIVFIL*QVFICL
Trigger: GAGGCAAATGAAAACTTGCAAGAGGATGAAGACGAT...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CAA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTTTCTGTCCTTCAACCTaGTTCAGAGAGTTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: CRFTECTHKQFEDQDNELFCPST*FREFFS
Trigger: AGAGAAGAACTCTCTGAACAAGGTTGAAGGACAGAA...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CAA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTTCCTTTATACATCATTaGAACCTTGACTGGCACAGG +
Preference number: 5 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLSFIHH*NLDWHR
Trigger: CCTGTGCCAGTCAAGGTTCAAATGATGTATAAAGGA...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
CDS-3UTR CAA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCTCCTTTATACATCATTaGAACCTTGACTGGCACAGG +
Preference number: 5 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRISFIHH*NLDWHR
Trigger: CCTGTGCCAGTCAAGGTTCAAATGATGTATAAAGGA...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CAA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTGAACCCTCCGATTTTTaGGCAGGCCCTGTTGTAGGT +
Preference number: 5 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLEPSDF*AGPVVG
Trigger: ACCTACAACAGGGCCTGCCAAAAAATCGGAGGGTTC...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CAA 90 bp TGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATGAACCCTCCGATTTTTaGGCAGGCCCTGTTGTAGGT +
Preference number: 5 (lower is better)
Translates to: CEFDKEGSGTAIVYCYLYEPSDF*AGPVVG
Trigger: ACCTACAACAGGGCCTGCCAAAAAATCGGAGGGTTC...ATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CAA 90 bp CTTTATTGCCCTGTCAGAGAAATAAGCTCTGGTGGGTTGCCTGCTGTGAATTTGAAGGAAAAACTGGTATaGGGAATAGAATTCGGTCAT +
Preference number: 5 (lower is better)
Translates to: LYCPVREISSGGLPAVNLKEKLV*GIEFGH
Trigger: ATGACCGAATTCTATTCCCAATACCAGTTTTTCCTT...CAAATTCACAGCAGGCAACCCACCAGAGCTTATTTCTCTGACAGGGCAATAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CAA 90 bp TCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCACACTTCAGGACTGCTCAATGTATTTATaGGAGTCCATGTATTCCACA +
Preference number: 5 (lower is better)
Translates to: SVISDTMSHSQSVSTLQDCSMYL*ESMYST
Trigger: TGTGGAATACATGGACTCCAATAAATACATTGAGCA...GTCCTGAAGTGTGGACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409261.6
CDS-3UTR CAA 90 bp AACAAGTGCAGAAGAGGAGAAGAGCTCTGTGCTGATGCTTGTCCAAAGGTCAATTGCTCAATGTATTTATaGGAGTCCATGTATTCCACA +
Preference number: 5 (lower is better)
Translates to: NKCRRGEELCADACPKVNCSMYL*ESMYST
Trigger: TGTGGAATACATGGACTCCAATAAATACATTGAGCA...ATTGACCTTTGGACAAGCATCAGCACAGAGCTCTTCTCCTCTTCTGCACTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427594.5
CDS CCA 90 bp AGTAACACTTTTCGCTTCTGTAGCTTTCTTAGCCCTTCCAAAATGTaGCTTTCCTTGATACGAGTTGGAGGTAGTTCATTTGTAGGACTA +
Preference number: 5 (lower is better)
Translates to: SNTFRFCSFLSPSKM*LSLIRVGGSSFVGL
Trigger: TAGTCCTACAAATGAACTACCTCCAACTCGTATCAAGGAAAGCCACATTTTGGAAGGGCTAAGAAAGCTACAGAAGCGAAAAGTGTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAATCCTCTGTTTATTTTaGAAGCATTCAAAGGCCACG +
Preference number: 5 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSILCLF*KHSKAT
Trigger: CGTGGCCTTTGAATGCTTCAAAAATAAACAGAGGAT...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CAA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCATATTGTGAGTCTATTTaGGTACAGGCACTTGAGGTA +
Preference number: 5 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSYCESI*VQALEV
Trigger: TACCTCAAGTGCCTGTACCAAAATAGACTCACAATA...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CAA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTTATTGTGAGTCTATTTaGGTACAGGCACTTGAGGTA +
Preference number: 5 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLYCESI*VQALEV
Trigger: TACCTCAAGTGCCTGTACCAAAATAGACTCACAATA...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CAA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTGCTCAATGTATTTATaGGAGTCCATGCATTCCACA +
Preference number: 5 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCCSMYL*ESMHST
Trigger: TGTGGAATGCATGGACTCCAATAAATACATTGAGCA...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000405974.7
CDS-3UTR CAA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCATGCTCAATGTATTTATaGGAGTCCATGCATTCCACA +
Preference number: 5 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSCSMYL*ESMHST
Trigger: TGTGGAATGCATGGACTCCAATAAATACATTGAGCA...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000405974.7
CDS-3UTR CAA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCTCATCAAACGTTTCATaGTCATCAGTGTCTGAAAGC +
Preference number: 5 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRISSNVS*SSVSES
Trigger: GCTTTCAGACACTGATGACAATGAAACGTTTGATGA...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp AGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTCACCAAACCCCAAGACTTTaGCATCTTTCTTTTCTACTT +
Preference number: 5 (lower is better)
Translates to: RFTECTHKQFEDQDNELHQTPRL*HLSFLL
Trigger: AAGTAGAAAAGAAAGATGCAAAAGTCTTGGGGTTTG...GTGAAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTGTTCTCCGATTATTTTaGCTTTGTAAACCGCCATCT +
Preference number: 5 (lower is better)
Translates to: CRFTECTHKQFEDQDNELVLRLF*LCKPPS
Trigger: AGATGGCGGTTTACAAAGCAAAAATAATCGGAGAAC...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp AAGAATCACTCAAAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCATGGTTCAATCTTCAGTaGGTTGTAAATGTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: KNHSKIPSCLPQAYLNYSWFNLQ*VVNVLW
Trigger: CCACAAGACATTTACAACCAACTGAAGATTGAACCA...TGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAGTGATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTGGCTGTGTCTATTCCTaGGTTCAATCTTCAGTTGGT +
Preference number: 5 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCGCVYS*VQSSVG
Trigger: ACCAACTGAAGATTGAACCAAGGAATAGACACAGCC...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGTGCAGGAAGCATTACTaGATCCACTTTCTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQACRKHY*IHFLSV
Trigger: CACAGACAGAAAGTGGATCAAGTAATGCTTCCTGCA...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCATTTCAAGGCCGATTTaGTATTTAGTTGGTGTTCGT +
Preference number: 5 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRIISRPI*YLVGVR
Trigger: ACGAACACCAACTAAATACAAAATCGGCCTTGAAAT...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CAA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTATTTCAAGGCCGATTTaGTATTTAGTTGGTGTTCGT +
Preference number: 5 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLISRPI*YLVGVR
Trigger: ACGAACACCAACTAAATACAAAATCGGCCTTGAAAT...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CAA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTCCAGCAGGAGTTGAATaGATGGAAATCTCATTTCTG +
Preference number: 5 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCPAGVE*MEISFL
Trigger: CAGAAATGAGATTTCCATCAATTCAACTCCTGCTGG...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTGGCGCTATCATTCAATaGTCCTTTTCTCCCTGGAGA +
Preference number: 5 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLGAIIQ*SFSPWR
Trigger: TCTCCAGGGAGAAAAGGACAATTGAATGATAGCGCC...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCGGTTTTAGGTGTGGTTaGCTGGAGGAAAGGGATCTT +
Preference number: 5 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSGFRCG*LEERDL
Trigger: AAGATCCCTTTCCTCCAGCAAACCACACCTAAAACC...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCGGGCTTTGTTTGCACTaGGCCCTTTTCCACATTTTC +
Preference number: 5 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSGLCLH*ALFHIF
Trigger: GAAAATGTGGAAAAGGGCCAAGTGCAAACAAAGCCC...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp GTTGCCTGCTGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTCAAACCCCAAGACTTTaGCATCTTTCTTTTCTACTT +
Preference number: 5 (lower is better)
Translates to: VACCEFDKEGSGTAIVYCQTPRL*HLSFLL
Trigger: AAGTAGAAAAGAAAGATGCAAAAGTCTTGGGGTTTG...ACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACAGCAGGCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTCTCAAAGATTCCAAGTaGTCTACCCCAGGCCTATCT +
Preference number: 5 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLLKDSK*STPGLS
Trigger: AGATAGGCCTGGGGTAGACAACTTGGAATCTTTGAG...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CAA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTTCCTTTATACATCATTaGAACCTTGACTGGCACAGG +
Preference number: 5 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCSFIHH*NLDWHR
Trigger: CCTGTGCCAGTCAAGGTTCAAATGATGTATAAAGGA...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CAA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATAAGCTCTGGTGGGTaGCCTGCTGTGAATTTGACA +
Preference number: 5 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSISSGG*PAVNLT
Trigger: TGTCAAATTCACAGCAGGCAACCCACCAGAGCTTAT...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CAA 90 bp TGTAGGTTTACAGAGTGTACCCACAAACAATTTGAGGACCAGGACAACGAACTTAAGGAAAAACTGGTATaGGGAATAGAATTCGGTCAT +
Preference number: 5 (lower is better)
Translates to: CRFTECTHKQFEDQDNELKEKLV*GIEFGH
Trigger: ATGACCGAATTCTATTCCCAATACCAGTTTTTCCTT...AAGTTCGTTGTCCTGGTCCTCAAATTGTTTGTGGGTACACTCTGTAAACCTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CAA 90 bp CAGCAGAAGCAGAATGACACTTATTACTATCACCTGAATCTCTGGCAACGAATCAAGGAAAAACTGGTATaGGGAATAGAATTCGGTCAT +
Preference number: 5 (lower is better)
Translates to: QQKQNDTYYYHLNLWQRIKEKLV*GIEFGH
Trigger: ATGACCGAATTCTATTCCCAATACCAGTTTTTCCTT...GATTCGTTGCCAGAGATTCAGGTGATAGTAATAAGTGTCATTCTGCTTCTGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CAA 90 bp AAGATTCCAAGTTGTCTACCCCAGGCCTATCTGAACTACTCAAAGATGTCTCTTTGCTCAATGTATTTATaGGAGTCCATGTATTCCACA +
Preference number: 5 (lower is better)
Translates to: KIPSCLPQAYLNYSKMSLCSMYL*ESMYST
Trigger: TGTGGAATACATGGACTCCAATAAATACATTGAGCA...AAGAGACATCTTTGAGTAGTTCAGATAGGCCTGGGGTAGACAACTTGGAATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409213.5
ENST00000409261.6
CDS-3UTR CAA 90 bp AAGGAGCCGAAAACAGCCTTTCTTTCCAGTTTGCTACATAATTGGTTTTGGCTTTTGTCCAAAGGTCAATaGACAGCTTTTCTCATCTTG +
Preference number: 5 (lower is better)
Translates to: KEPKTAFLSSLLHNWFWLLSKGQ*TAFLIL
Trigger: CAAGATGAGAAAAGCTGTCAATTGACCTTTGGACAA...AAGCCAAAACCAATTATGTAGCAAACTGGAAAGAAAGGCTGTTTTCGGCTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000427594.5
CDS-3UTR CAA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTTATTGTGAGTCTATTTaGGTACAGGCACTTGAGGTA +
Preference number: 5 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCYCESI*VQALEV
Trigger: TACCTCAAGTGCCTGTACCAAAATAGACTCACAATA...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CAA 90 bp TGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATTTGAGTAAGCAGAGCTaGAACAACTTGGTTGGCTAC +
Preference number: 5 (lower is better)
Translates to: CEFDKEGSGTAIVYCYLYLSKQS*NNLVGY
Trigger: GTAGCCAACCAAGTTGTTCAAGCTCTGCTTACTCAA...ATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CAA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCTTGAGTAAGCAGAGCTaGAACAACTTGGTTGGCTAC +
Preference number: 5 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSLSKQS*NNLVGY
Trigger: GTAGCCAACCAAGTTGTTCAAGCTCTGCTTACTCAA...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CAA 90 bp TGTGAATTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATGAAAGTGTTTTCTGTTaGTCTCCCAGCCAAACAGAC +
Preference number: 5 (lower is better)
Translates to: CEFDKEGSGTAIVYCYLYESVFC*SPSQTD
Trigger: GTCTGTTTGGCTGGGAGACAAACAGAAAACACTTTC...ATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAATTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTTGGTTTGACCAGCTTTaGCTGCTGAGGATTTTGTGT +
Preference number: 5 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLWFDQL*LLRILC
Trigger: ACACAAAATCCTCAGCAGCAAAAGCTGGTCAAACCA...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTAAAATGTGGCTTTCCTaGATACGAGTTGGAGGTAGT +
Preference number: 5 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLKMWLS*IRVGGS
Trigger: ACTACCTCCAACTCGTATCAAGGAAAGCCACATTTT...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp TTTGACAAGGAAGGCTCTGGTACTGCAATAGTTTATTGTTATCTCTATCAAGCGTTGGTTGTAAATGTCTaGTGGTGTTCTCCGATTATT +
Preference number: 5 (lower is better)
Translates to: FDKEGSGTAIVYCYLYQALVVNV*WCSPII
Trigger: AATAATCGGAGAACACCACAAGACATTTACAACCAA...CGCTTGATAGAGATAACAATAAACTATTGCAGTACCAGAGCCTTCCTTGTCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTATCGTCTTCATCCTCTaGCAAGTTTTCATTTGCCTC +
Preference number: 5 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLIVFIL*QVFICL
Trigger: GAGGCAAATGAAAACTTGCAAGAGGATGAAGACGAT...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CAA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTTCCTTTATACATCATTaGAACCTTGACTGGCACAGG +
Preference number: 5 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLSFIHH*NLDWHR
Trigger: CCTGTGCCAGTCAAGGTTCAAATGATGTATAAAGGA...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CAA 90 bp ATTGGGAATAGAATTCGGTCATTTCTGATACAATGTCACACTCCCAATCAGTGTAAGGAAAAACTGGTATaGGGAATAGAATTCGGTCAT +
Preference number: 5 (lower is better)
Translates to: IGNRIRSFLIQCHTPNQCKEKLV*GIEFGH
Trigger: ATGACCGAATTCTATTCCCAATACCAGTTTTTCCTT...ACACTGATTGGGAGTGTGACATTGTATCAGAAATGACCGAATTCTATTCCCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS-3UTR CAA 90 bp AGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTATTGCTGTCTTGTTCTCCGATTATTTTaGCTTTGTAAACCGCCATCT +
Preference number: 5 (lower is better)
Translates to: RLSTLFQEHGTDSIYCCLVLRLF*LCKPPS
Trigger: AGATGGCGGTTTACAAAGCAAAAATAATCGGAGAAC...AAGACAGCAATAAATGGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS-3UTR CAA 90 bp CAAGACCTCAACATAAAACTCATTGTTAGAATCTTCAAGAAGGCCTGGTTACAAATCCTTGAACCAATGTaGCTTTACCATCTTCAACTT +
Preference number: 5 (lower is better)
Translates to: QDLNIKLIVRIFKKAWLQILEPM*LYHLQL
Trigger: AAGTTGAAGATGGTAAAGCAACATTGGTTCAAGGAT...TTGTAACCAGGCCTTCTTGAAGATTCTAACAATGAGTTTTATGTTGAGGTCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427594.5
CDS-3UTR CAA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCATTTCAAGGCCGATTTaGTATTTAGTTGGTGTTCGT +
Preference number: 5 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSISRPI*YLVGVR
Trigger: ACGAACACCAACTAAATACAAAATCGGCCTTGAAAT...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
CDS-3UTR CAA 90 bp TATCATCAACTTCTAAGACTTAGTACATTATTTCAAGAGCATGGCACTGATTCCAAGGAAAAACTGGTATaGGGAATAGAATTCGGTCAT +
Preference number: 5 (lower is better)
Translates to: YHQLLRLSTLFQEHGTDSKEKLV*GIEFGH
Trigger: ATGACCGAATTCTATTCCCAATACCAGTTTTTCCTT...GGAATCAGTGCCATGCTCTTGAAATAATGTACTAAGTCTTAGAAGTTGATGATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS CAA 72 bp CGGCGGTCACTGCCTGGTTCCCCAAGTACAGCCACATaGGCACTGGGGCACTCTCCCTGGGTGAAGGCCTGC +
Preference number: 6 (lower is better)
Translates to: RRSLPGSPSTAT*ALGHSPWVKAC
Trigger: GCAGGCCTTCACCCAGGGAGAGTGCCCCAGTGCCAATGTGGCTGTACTTGGGGAACCAGGCAGTGACCGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CAA 90 bp GGCCCTGTGGGCCCCTCTCCCTCTGTACCTGAGGCGTCTGCACACTaGGGCACAGCTTCATCTCTAAGGGACAGCTGCTGGCGCAACTTG +
Preference number: 6 (lower is better)
Translates to: GPVGPSPSVPEASAH*GTASSLRDSCWRNL
Trigger: CAAGTTGCGCCAGCAGCTGTCCCTTAGAGATGAAGCTGTGCCCAAGTGTGCAGACGCCTCAGGTACAGAGGGAGAGGGGCCCACAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CCA 72 bp CCGAGGGCCTCCCAACACTGGGGAGACTCTCCAACATaGGAGCAGAAGGGGCCTTGTTGGGAGAGCTTTCCG +
Preference number: 6 (lower is better)
Translates to: PRASQHWGDSPT*EQKGPCWESFP
Trigger: CGGAAAGCTCTCCCAACAAGGCCCCTTCTGCTCCCATGTTGGAGAGTCTCCCCAGTGTTGGGAGGCCCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CCA 72 bp TGGGGCACTGGACCCAGTCCCTCCTGCTGGGCATCCTaGAGCTGTGCGGAAGTTGGGCGGAATGTTTTGGAA +
Preference number: 6 (lower is better)
Translates to: WGTGPSPSCWAS*SCAEVGRNVLE
Trigger: TTCCAAAACATTCCGCCCAACTTCCGCACAGCTCCAGGATGCCCAGCAGGAGGGACTGGGTCCAGTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CCA 72 bp CTGGGTCCCGGTGGCAGCAACTTCACTCCCCCAGTCTaGAAGCGGCTGGCTTGCCATTGGGTCTTCAGCATA +
Preference number: 6 (lower is better)
Translates to: LGPGGSNFTPPV*KRLACHWVFSI
Trigger: TATGCTGAAGACCCAATGGCAAGCCAGCCGCTTCCAGACTGGGGGAGTGAAGTTGCTGCCACCGGGACCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000640590.1
CDS TCA 72 bp ATCCCTCTGGCGGTCATGATGGGGTCGGATGTGGAATaGACAATGGCGCTATCTGCAGGGCGCTGGCCGTCT +
Preference number: 6 (lower is better)
Translates to: IPLAVMMGSDVE*TMALSAGRWPS
Trigger: AGACGGCCAGCGCCCTGCAGATAGCGCCATTGTTCATTCCACATCCGACCCCATCATGACCGCCAGAGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS GCA 72 bp GATGGGGTCGGATGTGGAATGAACAATGGCGCTATCTaGAGGGCGCTGGCCGTCTGTGGAGGAAGGCACTTC +
Preference number: 6 (lower is better)
Translates to: DGVGCGMNNGAI*RALAVCGGRHF
Trigger: GAAGTGCCTTCCTCCACAGACGGCCAGCGCCCTGCAGATAGCGCCATTGTTCATTCCACATCCGACCCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS TCA 72 bp TTCCTGAACATCCACAGCGGCTGGGAAGTCCTGCCGTaGATGCGGAGCAAGTTTGCGGAGACTTGCTCCCTG +
Preference number: 6 (lower is better)
Translates to: FLNIHSGWEVLP*MRSKFAETCSL
Trigger: CAGGGAGCAAGTCTCCGCAAACTTGCTCCGCATTCACGGCAGGACTTCCCAGCCGCTGTGGATGTTCAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS TCA 72 bp GGCGGCTCTGAAGAGGCCTCATCCCTCTGGCGGTCATaGTGGGGTCGGATGTGGAATGAACAATGGCGCTAT +
Preference number: 6 (lower is better)
Translates to: GGSEEASSLWRS*WGRMWNEQWRY
Trigger: ATAGCGCCATTGTTCATTCCACATCCGACCCCATCATGACCGCCAGAGGGATGAGGCCTCTTCAGAGCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS CAA 90 bp CTCCCAACACTGGGGAGACTCTCCAACATGGGAGCAGAAGGGGCCTaGTTGGGAGAGCTTTCCGTGGAAGAGTTCTGCCGGGTAAGAGAA +
Preference number: 6 (lower is better)
Translates to: LPTLGRLSNMGAEGA*LGELSVEEFCRVRE
Trigger: TTCTCTTACCCGGCAGAACTCTTCCACGGAAAGCTCTCCCAACAAGGCCCCTTCTGCTCCCATGTTGGAGAGTCTCCCCAGTGTTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CAA 90 bp TCCCGGTGGCAGCAACTTCACTCCCCCAGTCTGGAAGCGGCTGGCTaGCCATTGGGTCTTCAGCATATCCGAATGATGAGCATGTCTGAG +
Preference number: 6 (lower is better)
Translates to: SRWQQLHSPSLEAAG*PLGLQHIRMMSMSE
Trigger: CTCAGACATGCTCATCATTCGGATATGCTGAAGACCCAATGGCAAGCCAGCCGCTTCCAGACTGGGGGAGTGAAGTTGCTGCCACCGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000640590.1
CDS GCA 72 bp GGGGCCTTGTTGGGAGAGCTTTCCGTGGAAGAGTTCTaGCGGGTAAGAGAATTGCCTCTCTCGGCGGTATTG +
Preference number: 6 (lower is better)
Translates to: GALLGELSVEEF*RVRELPLSAVL
Trigger: CAATACCGCCGAGAGAGGCAATTCTCTTACCCGGCAGAACTCTTCCACGGAAAGCTCTCCCAACAAGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CCA 72 bp TTTGTGGGGTCCCAAGTGTTTGGCGAGGAGAGGTTTTaGGGACACCTCTCTTCGGAGAGACCTTTGGAGGCC +
Preference number: 6 (lower is better)
Translates to: FVGSQVFGEERF*GHLSSERPLEA
Trigger: GGCCTCCAAAGGTCTCTCCGAAGAGAGGTGTCCCCAAAACCTCTCCTCGCCAAACACTTGGGACCCCACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CCA 72 bp TATTACTGCCACCGCTGGCAGAGTACGTACACATTCTaGGTGCCTTGTCCTGGGTCCCGGTGGCAGCAACTT +
Preference number: 6 (lower is better)
Translates to: YYCHRWQSTYTF*VPCPGSRWQQL
Trigger: AAGTTGCTGCCACCGGGACCCAGGACAAGGCACCCAGAATGTGTACGTACTCTGCCAGCGGTGGCAGTAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS CAA 90 bp CCAACACTGGGGAGACTCTCCAACATGGGAGCAGAAGGGGCCTTGTaGGGAGAGCTTTCCGTGGAAGAGTTCTGCCGGGTAAGAGAATTG +
Preference number: 6 (lower is better)
Translates to: PTLGRLSNMGAEGAL*GELSVEEFCRVREL
Trigger: CAATTCTCTTACCCGGCAGAACTCTTCCACGGAAAGCTCTCCCAACAAGGCCCCTTCTGCTCCCATGTTGGAGAGTCTCCCCAGTGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CCA 72 bp GGTTCTTCCCATCGTGCCACGTGTAGGAGGAGCCACTaGAGTACTCGCTGCAGGTGCTTGAAAGAGACAGTT +
Preference number: 6 (lower is better)
Translates to: GSSHRATCRRSH*STRCRCLKETV
Trigger: AACTGTCTCTTTCAAGCACCTGCAGCGAGTACTCCAGTGGCTCCTCCTACACGTGGCACGATGGGAAGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS CCA 72 bp GTAGAAGGCTTGTCTCCTGAGTGTGTACTGAAGCTGTaGCTGCGGGCTTTGGCGCCATTCATACCCAGAGCT +
Preference number: 6 (lower is better)
Translates to: VEGLSPECVLKL*LRALAPFIPRA
Trigger: AGCTCTGGGTATGAATGGCGCCAAAGCCCGCAGCCACAGCTTCAGTACACACTCAGGAGACAAGCCTTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CCA 72 bp GTGGCAGCAACTTCACTCCCCCAGTCTGGAAGCGGCTaGCTTGCCATTGGGTCTTCAGCATATCCGAATGAT +
Preference number: 6 (lower is better)
Translates to: VAATSLPQSGSG*LAIGSSAYPND
Trigger: ATCATTCGGATATGCTGAAGACCCAATGGCAAGCCAGCCGCTTCCAGACTGGGGGAGTGAAGTTGCTGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000640590.1
CDS CAA 72 bp CAGCAACTTCACTCCCCCAGTCTGGAAGCGGCTGGCTaGCCATTGGGTCTTCAGCATATCCGAATGATGAGC +
Preference number: 6 (lower is better)
Translates to: QQLHSPSLEAAG*PLGLQHIRMMS
Trigger: GCTCATCATTCGGATATGCTGAAGACCCAATGGCAAGCCAGCCGCTTCCAGACTGGGGGAGTGAAGTTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000640590.1
CDS CAA 90 bp TCCTGCTGGGCATCCTGGAGCTGTGCGGAAGTTGGGCGGAATGTTTaGGAATGTGTGGATCTGATCGTAATTCAAAGAGGGGCCCTGAGC +
Preference number: 6 (lower is better)
Translates to: SCWASWSCAEVGRNV*ECVDLIVIQRGALS
Trigger: GCTCAGGGCCCCTCTTTGAATTACGATCAGATCCACACATTCCAAAACATTCCGCCCAACTTCCGCACAGCTCCAGGATGCCCAGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CAA 90 bp GAAGGCTTGTCTCCTGAGTGTGTACTGAAGCTGTGGCTGCGGGCTTaGGCGCCATTCATACCCAGAGCTGGTTTTAGGTGTGGTTTGCTG +
Preference number: 6 (lower is better)
Translates to: EGLSPECVLKLWLRA*APFIPRAGFRCGLL
Trigger: CAGCAAACCACACCTAAAACCAGCTCTGGGTATGAATGGCGCCAAAGCCCGCAGCCACAGCTTCAGTACACACTCAGGAGACAAGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS TCA 72 bp TCAAAGGCCACGCTAACAGAACAGACTCGGTTTTCCTaGACATCCACAGCGGCTGGGAAGTCCTGCCGTGAA +
Preference number: 6 (lower is better)
Translates to: SKATLTEQTRFS*TSTAAGKSCRE
Trigger: TTCACGGCAGGACTTCCCAGCCGCTGTGGATGTTCAGGAAAACCGAGTCTGTTCTGTTAGCGTGGCCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS TCA 72 bp TACTGTAGCTGTTTCGAGGACAGAGATGACCAGGGATaGCAGCCCCCAAGCCAGGGCATTTCAAGGCCGATT +
Preference number: 6 (lower is better)
Translates to: YCSCFEDRDDQG*QPPSQGISRPI
Trigger: AATCGGCCTTGAAATGCCCTGGCTTGGGGGCTGTCATCCCTGGTCATCTCTGTCCTCGAAACAGCTACAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS CCA 72 bp CACTTGGGCACAGCTTCATCTCTAAGGGACAGCTGCTaGCGCAACTTGTCAGCTTTTCAGGCCTTTCCTTGG +
Preference number: 6 (lower is better)
Translates to: HLGTASSLRDSC*RNLSAFQAFPW
Trigger: CCAAGGAAAGGCCTGAAAAGCTGACAAGTTGCGCCAGCAGCTGTCCCTTAGAGATGAAGCTGTGCCCAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CCA 72 bp TTGCTGTTTCACTGGGGACCCTGGTTTCGGACTTGGTaGATGAAGGTGCTGGTGAATAGTCATAGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: LLFHWGPWFRTW*MKVLVNSHSWA
Trigger: GGCCCAGCTATGACTATTCACCAGCACCTTCATCCACCAAGTCCGAAACCAGGGTCCCCAGTGAAACAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CCA 72 bp TTCCTTTCCAGGTGGGATGAGGAGTCCCTCAGACTTTaGAGGGATCCTCAAAGGCAACTTACTTGGGCTCCC +
Preference number: 6 (lower is better)
Translates to: FLSRWDEESLRL*RDPQRQLTWAP
Trigger: GGGAGCCCAAGTAAGTTGCCTTTGAGGATCCCTCCAAAGTCTGAGGGACTCCTCATCCCACCTGGAAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CCA 72 bp CCGTCTGTGGAGGAAGGCACTTCACGTTCAAGGGTTTaGGCTCTCATGGAAGAAACTGCAGAAAGGGCTGAC +
Preference number: 6 (lower is better)
Translates to: PSVEEGTSRSRV*ALMEETAERAD
Trigger: GTCAGCCCTTTCTGCAGTTTCTTCCATGAGAGCCCAAACCCTTGAACGTGAAGTGCCTTCCTCCACAGACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS CAA 72 bp TCTCCTGAGTGTGTACTGAAGCTGTGGCTGCGGGCTTaGGCGCCATTCATACCCAGAGCTGGTTTTAGGTGT +
Preference number: 6 (lower is better)
Translates to: SPECVLKLWLRA*APFIPRAGFRC
Trigger: ACACCTAAAACCAGCTCTGGGTATGAATGGCGCCAAAGCCCGCAGCCACAGCTTCAGTACACACTCAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CAA 72 bp CAAACCAGCTGGCAAAAGAAGGCCCAGGCTTCTGCTTaGCTTCCACAGAGGTGGGCTTTGTTTGCACTTGGC +
Preference number: 6 (lower is better)
Translates to: QTSWQKKAQASA*LPQRWALFALG
Trigger: GCCAAGTGCAAACAAAGCCCACCTCTGTGGAAGCAAAGCAGAAGCCTGGGCCTTCTTTTGCCAGCTGGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS TCA 72 bp TCCATCCTGGAGAACTGCTGCTGCAAGCTACGCATCTaGATTCTGTTGCGTTCAGACTCTAGGGTCACCTCC +
Preference number: 6 (lower is better)
Translates to: SILENCCCKLRI*ILLRSDSRVTS
Trigger: GGAGGTGACCCTAGAGTCTGAACGCAACAGAATTCAGATGCGTAGCTTGCAGCAGCAGTTCTCCAGGATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS TCA 72 bp GTGCAGCTCATCAAACGTTTCATTGTCATCAGTGTCTaGAAGCTGGAGGTTGAGAGCCATGCGGCCATGGCC +
Preference number: 6 (lower is better)
Translates to: VQLIKRFIVISV*KLEVESHAAMA
Trigger: GGCCATGGCCGCATGGCTCTCAACCTCCAGCTTTCAGACACTGATGACAATGAAACGTTTGATGAGCTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS TCA 72 bp CTCCTTCTGGAGAACTGCTGCTGCAAGCTACGCATCTaGATTCTGTTGCGTTCAGACTCTAGGGTCACCTCC +
Preference number: 6 (lower is better)
Translates to: LLLENCCCKLRI*ILLRSDSRVTS
Trigger: GGAGGTGACCCTAGAGTCTGAACGCAACAGAATTCAGATGCGTAGCTTGCAGCAGCAGTTCTCCAGAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427594.5
CDS GCA 72 bp AGAACTGCTGCTGCAAGCTACGCATCTGAATTCTGTTaGGTTCAGACTCTAGGGTCACCTCCTGCAACCGCT +
Preference number: 6 (lower is better)
Translates to: RTAAASYASEFC*VQTLGSPPATA
Trigger: AGCGGTTGCAGGAGGTGACCCTAGAGTCTGAACGCAACAGAATTCAGATGCGTAGCTTGCAGCAGCAGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000427594.5
CDS GCA 72 bp GTAGTGCTGTTTCCAGGGGAAGCCCATCAGCTAAACTaGCCTGTGCTTGTGAATCCGGTAGGGTCACATTTC +
Preference number: 6 (lower is better)
Translates to: VVLFPGEAHQLN*PVLVNPVGSHF
Trigger: GAAATGTGACCCTACCGGATTCACAAGCACAGGGCAGTTTAGCTGATGGGCTTCCCCTGGAAACAGCACTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CCA 72 bp TCATCAAACGTTTCATTGTCATCAGTGTCTGAAAGCTaGAGGTTGAGAGCCATGCGGCCATGGCCTTGGCCC +
Preference number: 6 (lower is better)
Translates to: SSNVSLSSVSES*RLRAMRPWPWP
Trigger: GGGCCAAGGCCATGGCCGCATGGCTCTCAACCTCCAGCTTTCAGACACTGATGACAATGAAACGTTTGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CCA 72 bp TCCTTGCTGTTTCACTGGGGACCCTGGTTTCGGACTTaGTGGATGAAGGTGCTGGTGAATAGTCATAGCTGG +
Preference number: 6 (lower is better)
Translates to: SLLFHWGPWFRT*WMKVLVNSHSW
Trigger: CCAGCTATGACTATTCACCAGCACCTTCATCCACCAAGTCCGAAACCAGGGTCCCCAGTGAAACAGCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CCA 72 bp TGGAGCAGAAATTCCTTTCAGCAGCGGGGATTTGAATaGGGTCCTTGCTGTTTCACTGGGGACCCTGGTTTC +
Preference number: 6 (lower is better)
Translates to: WSRNSFQQRGFE*GPCCFTGDPGF
Trigger: GAAACCAGGGTCCCCAGTGAAACAGCAAGGACCCCATTCAAATCCCCGCTGCTGAAAGGAATTTCTGCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CCA 72 bp GGCATGAGCAGGGCATCGGGTTTGAATGACTGCTTCTaGGGAGGGCATAGGGTGAGTGAAGATAGGCTTTTT +
Preference number: 6 (lower is better)
Translates to: GMSRASGLNDCF*GGHRVSEDRLF
Trigger: AAAAAGCCTATCTTCACTCACCCTATGCCCTCCCCAGAAGCAGTCATTCAAACCCGATGCCCTGCTCATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CCA 72 bp AGGAAGGCACTTCACGTTCAAGGGTTTGGGCTCTCATaGAAGAAACTGCAGAAAGGGCTGACTGGAGAGGCA +
Preference number: 6 (lower is better)
Translates to: RKALHVQGFGLS*KKLQKGLTGEA
Trigger: TGCCTCTCCAGTCAGCCCTTTCTGCAGTTTCTTCCATGAGAGCCCAAACCCTTGAACGTGAAGTGCCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000639875.1
ENST00000640590.1
CDS CCA 72 bp CATAGTCCAGGTCACTGTCACTATTACTGCCACCGCTaGCAGAGTACGTACACATTCTGGGTGCCTTGTCCT +
Preference number: 6 (lower is better)
Translates to: HSPGHCHYYCHR*QSTYTFWVPCP
Trigger: AGGACAAGGCACCCAGAATGTGTACGTACTCTGCCAGCGGTGGCAGTAATAGTGACAGTGACCTGGACTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS CAA 72 bp GTTCATGTATCAGCTTCTCATGCATGGCCCCCTCACTaGTTCTTTGGGCAACTTCTCGCTGTAGTCGGGCCA +
Preference number: 6 (lower is better)
Translates to: VHVSASHAWPPH*FFGQLLAVVGP
Trigger: TGGCCCGACTACAGCGAGAAGTTGCCCAAAGAACAAGTGAGGGGGCCATGCATGAGAAGCTGATACATGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000427594.5
CDS CAA 90 bp CACTTGGGCACAGCTTCATCTCTAAGGGACAGCTGCTGGCGCAACTaGTCAGCTTTTCAGGCCTTTCCTTGGGATAAACTGAGGATGTGC +
Preference number: 6 (lower is better)
Translates to: HLGTASSLRDSCWRN*SAFQAFPWDKLRMC
Trigger: GCACATCCTCAGTTTATCCCAAGGAAAGGCCTGAAAAGCTGACAAGTTGCGCCAGCAGCTGTCCCTTAGAGATGAAGCTGTGCCCAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS TCA 72 bp GACTCTAGGGTCACCTCCTGCAACCGCTTCTCGCTTTaGAGACGTAAGTGTCTCTCCTCTTCCAGTTCATGT +
Preference number: 6 (lower is better)
Translates to: DSRVTSCNRFSL*RRKCLSSSSSC
Trigger: ACATGAACTGGAAGAGGAGAGACACTTACGTCTTCAAAGCGAGAAGCGGTTGCAGGAGGTGACCCTAGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000427594.5
CDS TCA 72 bp GTGAATCCGGTAGGGTCACATTTCTTTCACCCGCTGTaGTCTCCATGCTTGCTGGATTCTTGGAGTCCTCTG +
Preference number: 6 (lower is better)
Translates to: VNPVGSHFFHPL*SPCLLDSWSPL
Trigger: CAGAGGACTCCAAGAATCCAGCAAGCATGGAGATCACAGCGGGTGAAAGAAATGTGACCCTACCGGATTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS GCA 72 bp ACTCGCTGCAGGTGCTTGAAAGAGACAGTTCACTGCTaGTACTGTAGCTGTTTCGAGGACAGAGATGACCAG +
Preference number: 6 (lower is better)
Translates to: TRCRCLKETVHC*YCSCFEDRDDQ
Trigger: CTGGTCATCTCTGTCCTCGAAACAGCTACAGTAGCAGCAGTGAACTGTCTCTTTCAAGCACCTGCAGCGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS CCA 72 bp AGCTCTGGTTTGGAACTGCTTGGAGCAATGCTAAGGTaGAAGGGTCATCGTCCGCATCAACGTGGGAATCTA +
Preference number: 6 (lower is better)
Translates to: SSGLELLGAMLR*KGHRPHQRGNL
Trigger: TAGATTCCCACGTTGATGCGGACGATGACCCTTCCACCTTAGCATTGCTCCAAGCAGTTCCAAACCAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CCA 72 bp CAAGAGTCACCAGGCCAGATGAAGGGAGTAGTGTGGTaGCTTCGGGCTCCATTAGTTTTGATTTCTGAGGTG +
Preference number: 6 (lower is better)
Translates to: QESPGQMKGVVW*LRAPLVLISEV
Trigger: CACCTCAGAAATCAAAACTAATGGAGCCCGAAGCCACCACACTACTCCCTTCATCTGGCCTGGTGACTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CCA 72 bp CAGCTGGGGAGACTTCATGAGCACTTTGAGTCCCACTaGAAGGCGAGTTTTCAGTCCTTTCTCATGAGCACT +
Preference number: 6 (lower is better)
Translates to: QLGRLHEHFESH*KASFQSFLMST
Trigger: AGTGCTCATGAGAAAGGACTGAAAACTCGCCTTCCAGTGGGACTCAAAGTGCTCATGAAGTCTCCCCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CAA 90 bp GGCCAGATGAAGGGAGTAGTGTGGTGGCTTCGGGCTCCATTAGTTTaGATTTCTGAGGTGAAGACTTGCCCCTGGGAGGTATTTTTGTCA +
Preference number: 6 (lower is better)
Translates to: GQMKGVVWWLRAPLV*ISEVKTCPWEVFLS
Trigger: TGACAAAAATACCTCCCAGGGGCAAGTCTTCACCTCAGAAATCAAAACTAATGGAGCCCGAAGCCACCACACTACTCCCTTCATCTGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CAA 90 bp AGGCATCTGGATGCCTTCCAGAAGTTTCTAGCTTGGATGTACTGCTaGTTTCAAAAGTGCTTGGATGCTGAGTCCTCCCTGGGCTCTGCA +
Preference number: 6 (lower is better)
Translates to: RHLDAFQKFLAWMYC*FQKCLDAESSLGSA
Trigger: TGCAGAGCCCAGGGAGGACTCAGCATCCAAGCACTTTTGAAACAAGCAGTACATCCAAGCTAGAAACTTCTGGAAGGCATCCAGATGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CAA 90 bp AGAAGGCCCAGGCTTCTGCTTTGCTTCCACAGAGGTGGGCTTTGTTaGCACTTGGCCCTTTTCCACATTTTCCTGAATGCACAACATGAC +
Preference number: 6 (lower is better)
Translates to: RRPRLLLCFHRGGLC*HLALFHIFLNAQHD
Trigger: GTCATGTTGTGCATTCAGGAAAATGTGGAAAAGGGCCAAGTGCAAACAAAGCCCACCTCTGTGGAAGCAAAGCAGAAGCCTGGGCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS GCA 72 bp CGGAAACACTGTGGGTTAATTTACTGCCATGTGGCCTaGAGCTCTGGTTTGGAACTGCTTGGAGCAATGCTA +
Preference number: 6 (lower is better)
Translates to: RKHCGLIYCHVA*SSGLELLGAML
Trigger: TAGCATTGCTCCAAGCAGTTCCAAACCAGAGCTGCAGGCCACATGGCAGTAAATTAACCCACAGTGTTTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS GCA 72 bp AAGTTTCTAGCTTGGATGTACTGCTTGTTTCAAAAGTaGTTGGATGCTGAGTCCTCCCTGGGCTCTGCAGGG +
Preference number: 6 (lower is better)
Translates to: KFLAWMYCLFQK*LDAESSLGSAG
Trigger: CCCTGCAGAGCCCAGGGAGGACTCAGCATCCAAGCACTTTTGAAACAAGCAGTACATCCAAGCTAGAAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS GCA 72 bp CATTATCTCCATAGTCCAGGTCACTGTCACTATTACTaGCACCGCTGGCAGAGTACGTACACATTCTGGGTG +
Preference number: 6 (lower is better)
Translates to: HYLHSPGHCHYY*HRWQSTYTFWV
Trigger: CACCCAGAATGTGTACGTACTCTGCCAGCGGTGGCAGTAATAGTGACAGTGACCTGGACTATGGAGATAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS CCA 72 bp TGGAGGAGCAGATCAGAAGTGGGTCTGACTCGCTGTTaGAATAGGATGCTTAGTGTTCGATTCTGCTGTTCC +
Preference number: 6 (lower is better)
Translates to: WRSRSEVGLTRC*NRMLSVRFCCS
Trigger: GGAACAGCAGAATCGAACACTAAGCATCCTATTCCAACAGCGAGTCAGACCCACTTCTGATCTGCTCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS CCA 72 bp CTGTGGGTTAATTTACTGCCATGTGGCCTGCAGCTCTaGTTTGGAACTGCTTGGAGCAATGCTAAGGTGGAA +
Preference number: 6 (lower is better)
Translates to: LWVNLLPCGLQL*FGTAWSNAKVE
Trigger: TTCCACCTTAGCATTGCTCCAAGCAGTTCCAAACCAGAGCTGCAGGCCACATGGCAGTAAATTAACCCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CAA 72 bp ACAGCTTCATCTCTAAGGGACAGCTGCTGGCGCAACTaGTCAGCTTTTCAGGCCTTTCCTTGGGATAAACTG +
Preference number: 6 (lower is better)
Translates to: TASSLRDSCWRN*SAFQAFPWDKL
Trigger: CAGTTTATCCCAAGGAAAGGCCTGAAAAGCTGACAAGTTGCGCCAGCAGCTGTCCCTTAGAGATGAAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CAA 72 bp GCATCCTGGAGCTGTGCGGAAGTTGGGCGGAATGTTTaGGAATGTGTGGATCTGATCGTAATTCAAAGAGGG +
Preference number: 6 (lower is better)
Translates to: ASWSCAEVGRNV*ECVDLIVIQRG
Trigger: CCCTCTTTGAATTACGATCAGATCCACACATTCCAAAACATTCCGCCCAACTTCCGCACAGCTCCAGGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CAA 90 bp GTCACATTTCTTTCACCCGCTGTGATCTCCATGCTTGCTGGATTCTaGGAGTCCTCTGGCTTAGACTTGTTCACAGCCACGGAACTTTTG +
Preference number: 6 (lower is better)
Translates to: VTFLSPAVISMLAGF*ESSGLDLFTATELL
Trigger: CAAAAGTTCCGTGGCTGTGAACAAGTCTAAGCCAGAGGACTCCAAGAATCCAGCAAGCATGGAGATCACAGCGGGTGAAAGAAATGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS TCA 72 bp TTCTCCCTCCAGAGACTCCTGTGTTGCTCCTCAAGCTaGGTCAGCAGATGCTCAATGTATTTATTGGAGTCC +
Preference number: 6 (lower is better)
Translates to: FSLQRLLCCSSS*VSRCSMYLLES
Trigger: GGACTCCAATAAATACATTGAGCATCTGCTGACTCAGCTTGAGGAGCAACACAGGAGTCTCTGGAGGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317721.10
ENST00000358991.4
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
ENST00000427594.5
CDS TCA 72 bp GCCCATGGGTGCCGAAGACCTGGAATTACTCTGGCATaGTATATTGTGTGTTGGTTTGACCAGCTTTTGCTG +
Preference number: 6 (lower is better)
Translates to: AHGCRRPGITLA*YIVCWFDQLLL
Trigger: CAGCAAAAGCTGGTCAAACCAACACACAATATATCATGCCAGAGTAATTCCAGGTCTTCGGCACCCATGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS TCA 72 bp TTGGCGGGTGATGAGGATGATGAGGAACTGCTGACCTaGGATGATGGTGACTCATTTACCCCTAAGAAGGAA +
Preference number: 6 (lower is better)
Translates to: LAGDEDDEELLT*DDGDSFTPKKE
Trigger: TTCCTTCTTAGGGGTAAATGAGTCACCATCATCTCAGGTCAGCAGTTCCTCATCATCCTCATCACCCGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS GCA 72 bp GGTCACATTTCTTTCACCCGCTGTGATCTCCATGCTTaGTGGATTCTTGGAGTCCTCTGGCTTAGACTTGTT +
Preference number: 6 (lower is better)
Translates to: GHISFTRCDLHA*WILGVLWLRLV
Trigger: AACAAGTCTAAGCCAGAGGACTCCAAGAATCCAGCAAGCATGGAGATCACAGCGGGTGAAAGAAATGTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CCA 72 bp ATGATGGTGACTCATTTACCCCTAAGAAGGAAGGCTTaGGGGGTGTGGAGGCGCTATCATTCAATTGTCCTT +
Preference number: 6 (lower is better)
Translates to: MMVTHLPLRRKA*GVWRRYHSIVL
Trigger: AAGGACAATTGAATGATAGCGCCTCCACACCCCCCAAGCCTTCCTTCTTAGGGGTAAATGAGTCACCATCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CCA 72 bp TGTGATCTCCATGCTTGCTGGATTCTTGGAGTCCTCTaGCTTAGACTTGTTCACAGCCACGGAACTTTTGGA +
Preference number: 6 (lower is better)
Translates to: CDLHACWILGVL*LRLVHSHGTFG
Trigger: TCCAAAAGTTCCGTGGCTGTGAACAAGTCTAAGCCAGAGGACTCCAAGAATCCAGCAAGCATGGAGATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CCA 72 bp CACATTTCTTTCACCCGCTGTGATCTCCATGCTTGCTaGATTCTTGGAGTCCTCTGGCTTAGACTTGTTCAC +
Preference number: 6 (lower is better)
Translates to: HISFTRCDLHAC*ILGVLWLRLVH
Trigger: GTGAACAAGTCTAAGCCAGAGGACTCCAAGAATCCAGCAAGCATGGAGATCACAGCGGGTGAAAGAAATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CCA 72 bp GGAAAGGTTCCGATCCCACTGTCCAATGTTCTCATCTaGCAGTTGGATTCAGGGAGTCTTTTGGTACTTCCA +
Preference number: 6 (lower is better)
Translates to: GKVPIPLSNVLI*QLDSGSLLVLP
Trigger: TGGAAGTACCAAAAGACTCCCTGAATCCAACTGCCAGATGAGAACATTGGACAGTGGGATCGGAACCTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473859.1
CDS CAA 90 bp GTGATCTCCATGCTTGCTGGATTCTTGGAGTCCTCTGGCTTAGACTaGTTCACAGCCACGGAACTTTTGGAGGCTTCATTTAAACTGTCT +
Preference number: 6 (lower is better)
Translates to: VISMLAGFLESSGLD*FTATELLEASFKLS
Trigger: AGACAGTTTAAATGAAGCCTCCAAAAGTTCCGTGGCTGTGAACAAGTCTAAGCCAGAGGACTCCAAGAATCCAGCAAGCATGGAGATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CCA 72 bp TGTGGAGGCGCTATCATTCAATTGTCCTTTTCTCCCTaGAGATACACTTTTGGAGGACGTCATTTCCAGTGG +
Preference number: 6 (lower is better)
Translates to: CGGAIIQLSFSP*RYTFGGRHFQW
Trigger: CCACTGGAAATGACGTCCTCCAAAAGTGTATCTCCAGGGAGAAAAGGACAATTGAATGATAGCGCCTCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CAA 72 bp ATGCTTGCTGGATTCTTGGAGTCCTCTGGCTTAGACTaGTTCACAGCCACGGAACTTTTGGAGGCTTCATTT +
Preference number: 6 (lower is better)
Translates to: MLAGFLESSGLD*FTATELLEASF
Trigger: AAATGAAGCCTCCAAAAGTTCCGTGGCTGTGAACAAGTCTAAGCCAGAGGACTCCAAGAATCCAGCAAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CAA 72 bp GATGCCTTCCAGAAGTTTCTAGCTTGGATGTACTGCTaGTTTCAAAAGTGCTTGGATGCTGAGTCCTCCCTG +
Preference number: 6 (lower is better)
Translates to: DAFQKFLAWMYC*FQKCLDAESSL
Trigger: CAGGGAGGACTCAGCATCCAAGCACTTTTGAAACAAGCAGTACATCCAAGCTAGAAACTTCTGGAAGGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CAA 72 bp GCAGAGGCATCTGGATGCCTTCCAGAAGTTTCTAGCTaGGATGTACTGCTTGTTTCAAAAGTGCTTGGATGC +
Preference number: 6 (lower is better)
Translates to: AEASGCLPEVSS*DVLLVSKVLGC
Trigger: GCATCCAAGCACTTTTGAAACAAGCAGTACATCCAAGCTAGAAACTTCTGGAAGGCATCCAGATGCCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CAA 72 bp CTGCTTTGCTTCCACAGAGGTGGGCTTTGTTTGCACTaGGCCCTTTTCCACATTTTCCTGAATGCACAACAT +
Preference number: 6 (lower is better)
Translates to: LLCFHRGGLCLH*ALFHIFLNAQH
Trigger: ATGTTGTGCATTCAGGAAAATGTGGAAAAGGGCCAAGTGCAAACAAAGCCCACCTCTGTGGAAGCAAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CAA 90 bp CCTTGGGATAAACTGAGGATGTGCCTTCCAGAAAGTGTTTTCTGTTaGTCTCCCAGCCAAACAGACTGTCGGAAACACTGTGGGTTAATT +
Preference number: 6 (lower is better)
Translates to: PWDKLRMCLPESVFC*SPSQTDCRKHCGLI
Trigger: AATTAACCCACAGTGTTTCCGACAGTCTGTTTGGCTGGGAGACAAACAGAAAACACTTTCTGGAAGGCACATCCTCAGTTTATCCCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CAA 90 bp TTCTTGGAGTCCTCTGGCTTAGACTTGTTCACAGCCACGGAACTTTaGGAGGCTTCATTTAAACTGTCTTTTTCATGTTTCCCTGGCACG +
Preference number: 6 (lower is better)
Translates to: FLESSGLDLFTATEL*EASFKLSFSCFPGT
Trigger: CGTGCCAGGGAAACATGAAAAAGACAGTTTAAATGAAGCCTCCAAAAGTTCCGTGGCTGTGAACAAGTCTAAGCCAGAGGACTCCAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CAA 90 bp AGCCCTGAGAACTGCCCTTTAACACATTCCTGCAGGAAGCATTACTaGATCCACTTTCTGTCTGTGGAGCTGCTTTCTTATCAACTCTGT +
Preference number: 6 (lower is better)
Translates to: SPENCPLTHSCRKHY*IHFLSVELLSYQLC
Trigger: ACAGAGTTGATAAGAAAGCAGCTCCACAGACAGAAAGTGGATCAAGTAATGCTTCCTGCAGGAATGTGTTAAAGGGCAGTTCTCAGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000409261.6
ENST00000473859.1
CDS GCA 72 bp CGCCATTCATACCCAGAGCTGGTTTTAGGTGTGGTTTaGTGGAGGAAAGGGATCTTCTCATGGATCTATTAT +
Preference number: 6 (lower is better)
Translates to: RHSYPELVLGVV*WRKGIFSWIYY
Trigger: ATAATAGATCCATGAGAAGATCCCTTTCCTCCAGCAAACCACACCTAAAACCAGCTCTGGGTATGAATGGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CCA 72 bp CAGAGGCATCTGGATGCCTTCCAGAAGTTTCTAGCTTaGATGTACTGCTTGTTTCAAAAGTGCTTGGATGCT +
Preference number: 6 (lower is better)
Translates to: QRHLDAFQKFLA*MYCLFQKCLDA
Trigger: AGCATCCAAGCACTTTTGAAACAAGCAGTACATCCAAGCTAGAAACTTCTGGAAGGCATCCAGATGCCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CAA 72 bp AAACTGAGGATGTGCCTTCCAGAAAGTGTTTTCTGTTaGTCTCCCAGCCAAACAGACTGTCGGAAACACTGT +
Preference number: 6 (lower is better)
Translates to: KLRMCLPESVFC*SPSQTDCRKHC
Trigger: ACAGTGTTTCCGACAGTCTGTTTGGCTGGGAGACAAACAGAAAACACTTTCTGGAAGGCACATCCTCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS TCA 72 bp CTGCTTTCTTATCAACTCTGTTCAAGAGTTCCGTCATaGAGGTGTCTTTCGTTGAACATGCAACAGGGCTGT +
Preference number: 6 (lower is better)
Translates to: LLSYQLCSRVPS*RCLSLNMQQGC
Trigger: ACAGCCCTGTTGCATGTTCAACGAAAGACACCTTCATGACGGAACTCTTGAACAGAGTTGATAAGAAAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000409261.6
ENST00000473859.1
CDS GCA 72 bp CAGCCAATGACACGTCTGAAGGACTTTTCTCATCACTaGTCTCTATGTGCAGCTCATCAAACGTTTCATTGT +
Preference number: 6 (lower is better)
Translates to: QPMTRLKDFSHH*SLCAAHQTFHC
Trigger: ACAATGAAACGTTTGATGAGCTGCACATAGAGAGCAGTGATGAGAAAAGTCCTTCAGACGTGTCATTGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS GCA 72 bp ATAGGCTTTTTGAAGGCCACAGAAGGTTTCTTCCTCTaGACTTCTGTCGTGGCCGGATTAGAAGAAATAACT +
Preference number: 6 (lower is better)
Translates to: IGFLKATEGFFL*TSVVAGLEEIT
Trigger: AGTTATTTCTTCTAATCCGGCCACGACAGAAGTGCAGAGGAAGAAACCTTCTGTGGCCTTCAAAAAGCCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CAA 90 bp ACACAGGAACTACAACTCTCTCCAGCTAAAAATTTCCTCCCGCGGTaGGTTATCCTCTGTTTATTTTTGAAGCATTCAAAGGCCACGCTA +
Preference number: 6 (lower is better)
Translates to: TQELQLSPAKNFLPR*VILCLFLKHSKATL
Trigger: TAGCGTGGCCTTTGAATGCTTCAAAAATAAACAGAGGATAACCAACCGCGGGAGGAAATTTTTAGCTGGAGAGAGTTGTAGTTCCTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS CAA 90 bp TTTCGCTTCTGTAGCTTTCTTAGCCCTTCCAAAATGTGGCTTTCCTaGATACGAGTTGGAGGTAGTTCATTTGTAGGACTAGCAAAGCCA +
Preference number: 6 (lower is better)
Translates to: FRFCSFLSPSKMWLS*IRVGGSSFVGLAKP
Trigger: TGGCTTTGCTAGTCCTACAAATGAACTACCTCCAACTCGTATCAAGGAAAGCCACATTTTGGAAGGGCTAAGAAAGCTACAGAAGCGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CAA 90 bp TACTTCCATATCGGCTTTGATTTTCATGTTTTTCTTGTGGTTTCCTaGAGTACTGATAGAGCTGCCGATGAGACAGGAGCCCTGAGAACT +
Preference number: 6 (lower is better)
Translates to: YFHIGFDFHVFLVVS*STDRAADETGALRT
Trigger: AGTTCTCAGGGCTCCTGTCTCATCGGCAGCTCTATCAGTACTCAAGGAAACCACAAGAAAAACATGAAAATCAAAGCCGATATGGAAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000409261.6
ENST00000473859.1
CDS TCA 72 bp CTGCTTTCACTCCTCGAATCCTCATCAACCACCATGTaGAGATCTTCCAAAGCTTCCTTATGTTTTCTCTCT +
Preference number: 6 (lower is better)
Translates to: LLSLLESSSTTM*RSSKASLCFLS
Trigger: AGAGAGAAAACATAAGGAAGCTTTGGAAGATCTTCACATGGTGGTTGATGAGGATTCGAGGAGTGAAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS CCA 72 bp CATTCATACCCAGAGCTGGTTTTAGGTGTGGTTTGCTaGAGGAAAGGGATCTTCTCATGGATCTATTATCTA +
Preference number: 6 (lower is better)
Translates to: HSYPELVLGVVC*RKGIFSWIYYL
Trigger: TAGATAATAGATCCATGAGAAGATCCCTTTCCTCCAGCAAACCACACCTAAAACCAGCTCTGGGTATGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CAA 72 bp AATTTCCTCCCGCGGTTGGTTATCCTCTGTTTATTTTaGAAGCATTCAAAGGCCACGCTAACAGAACAGACT +
Preference number: 6 (lower is better)
Translates to: NFLPRLVILCLF*KHSKATLTEQT
Trigger: AGTCTGTTCTGTTAGCGTGGCCTTTGAATGCTTCAAAAATAAACAGAGGATAACCAACCGCGGGAGGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS CAA 72 bp AAACCGCCATCTGGATTATCTGCTGACTTGGTGTCCTaGATAAGCTCATTTTCTGTCTCACACTGTAGTTCA +
Preference number: 6 (lower is better)
Translates to: KPPSGLSADLVS*ISSFSVSHCSS
Trigger: TGAACTACAGTGTGAGACAGAAAATGAGCTTATCAAGGACACCAAGTCAGCAGATAATCCAGATGGCGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CAA 72 bp AACTGCCCTTTAACACATTCCTGCAGGAAGCATTACTaGATCCACTTTCTGTCTGTGGAGCTGCTTTCTTAT +
Preference number: 6 (lower is better)
Translates to: NCPLTHSCRKHY*IHFLSVELLSY
Trigger: ATAAGAAAGCAGCTCCACAGACAGAAAGTGGATCAAGTAATGCTTCCTGCAGGAATGTGTTAAAGGGCAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317721.10
ENST00000409261.6
ENST00000473859.1
CDS TCA 72 bp TGGAATTACTCTGGCATGATATATTGTGTGTTGGTTTaGCCAGCTTTTGCTGCTGAGGATTTTGTGTCACTG +
Preference number: 6 (lower is better)
Translates to: WNYSGMIYCVLV*PAFAAEDFVSL
Trigger: CAGTGACACAAAATCCTCAGCAGCAAAAGCTGGTCAAACCAACACACAATATATCATGCCAGAGTAATTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS GCA 72 bp GTTGGATTCTATGATGTGGCTCTGAAATACAGAATCTaGAACTGCATCGTCTTCATCCTCTTGCAAGTTTTC +
Preference number: 6 (lower is better)
Translates to: VGFYDVALKYRI*NCIVFILLQVF
Trigger: GAAAACTTGCAAGAGGATGAAGACGATGCAGTTGCAGATTCTGTATTTCAGAGCCACATCATAGAATCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS CCA 72 bp TTTCGCTTCTGTAGCTTTCTTAGCCCTTCCAAAATGTaGCTTTCCTTGATACGAGTTGGAGGTAGTTCATTT +
Preference number: 6 (lower is better)
Translates to: FRFCSFLSPSKM*LSLIRVGGSSF
Trigger: AAATGAACTACCTCCAACTCGTATCAAGGAAAGCCACATTTTGGAAGGGCTAAGAAAGCTACAGAAGCGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CAA 72 bp TGTAGCTTTCTTAGCCCTTCCAAAATGTGGCTTTCCTaGATACGAGTTGGAGGTAGTTCATTTGTAGGACTA +
Preference number: 6 (lower is better)
Translates to: CSFLSPSKMWLS*IRVGGSSFVGL
Trigger: TAGTCCTACAAATGAACTACCTCCAACTCGTATCAAGGAAAGCCACATTTTGGAAGGGCTAAGAAAGCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CAA 72 bp CTTTCGTTGAACATGCAACAGGGCTGTGTCTATTCCTaGGTTCAATCTTCAGTTGGTTGTAAATGTCTTGTG +
Preference number: 6 (lower is better)
Translates to: LSLNMQQGCVYS*VQSSVGCKCLV
Trigger: CACAAGACATTTACAACCAACTGAAGATTGAACCAAGGAATAGACACAGCCCTGTTGCATGTTCAACGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS CAA 72 bp AAATACAGAATCTGCAACTGCATCGTCTTCATCCTCTaGCAAGTTTTCATTTGCCTCTTTTACCAGGGAGTC +
Preference number: 6 (lower is better)
Translates to: KYRICNCIVFIL*QVFICLFYQGV
Trigger: GACTCCCTGGTAAAAGAGGCAAATGAAAACTTGCAAGAGGATGAAGACGATGCAGTTGCAGATTCTGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6
CDS GCA 72 bp ACTCGCTGTTGGAATAGGATGCTTAGTGTTCGATTCTaGTGTTCCAAATCAAACACTCTTGTTTTCAACTTC +
Preference number: 6 (lower is better)
Translates to: TRCWNRMLSVRF*CSKSNTLVFNF
Trigger: GAAGTTGAAAACAAGAGTGTTTGATTTGGAACAGCAGAATCGAACACTAAGCATCCTATTCCAACAGCGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS CAA 72 bp CTACAACTCTCTCCAGCTAAAAATTTCCTCCCGCGGTaGGTTATCCTCTGTTTATTTTTGAAGCATTCAAAG +
Preference number: 6 (lower is better)
Translates to: LQLSPAKNFLPR*VILCLFLKHSK
Trigger: CTTTGAATGCTTCAAAAATAAACAGAGGATAACCAACCGCGGGAGGAAATTTTTAGCTGGAGAGAGTTGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS CAA 72 bp CGTCTGTTTCCAGGGTCAATGTATTGTGAGTCTATTTaGGTACAGGCACTTGAGGTAGCTTATCTCATTTAT +
Preference number: 6 (lower is better)
Translates to: RLFPGSMYCESI*VQALEVAYLIY
Trigger: ATAAATGAGATAAGCTACCTCAAGTGCCTGTACCAAAATAGACTCACAATACATTGACCCTGGAAACAGACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317721.10
ENST00000405974.7
ENST00000409213.5
ENST00000409261.6
CDS CAA 72 bp AACAGGGCTGTGTCTATTCCTTGGTTCAATCTTCAGTaGGTTGTAAATGTCTTGTGGTGTTCTCCGATTATT +
Preference number: 6 (lower is better)
Translates to: NRAVSIPWFNLQ*VVNVLWCSPII
Trigger: AATAATCGGAGAACACCACAAGACATTTACAACCAACTGAAGATTGAACCAAGGAATAGACACAGCCCTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317721.10
ENST00000409261.6