RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NCKAP1L (Homo sapiens)

Ensembl gene IDs: ENSG00000123338

Ensembl transcript IDs: ENST00000293373.11, ENST00000545638.2, ENST00000547500.1, ENST00000548221.5, ENST00000548916.1, ENST00000548980.1, ENST00000549451.1, ENST00000552211.5

Found 767 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCACTGAAGTTCTGCTCCCCTTCTCTGGGCAGGCTGACGAAGGCCTaGATGGCTGGGGAGAGGATGATGGTCCCACTGCTTGCCTGTCTA +
Preference number: 1 (lower is better)
Translates to: ALKFCSPSLGRLTKA*MAGERMMVPLLACL
Trigger: TAGACAGGCAAGCAGTGGGACCATCATCCTCTCCCCAGCCATGCAGGCCTTCGTCAGCCTGCCCAGAGAAGGGGAGCAGAACTTCAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR GCA 90 bp GCCCGCATCTCAGAGATGTCAGAGAACTCCTCTGCACTGAAGTTCTaGTCCCCTTCTCTGGGCAGGCTGACGAAGGCCTGCATGGCTGGG +
Preference number: 1 (lower is better)
Translates to: ARISEMSENSSALKF*SPSLGRLTKACMAG
Trigger: CCCAGCCATGCAGGCCTTCGTCAGCCTGCCCAGAGAAGGGGAGCAGAACTTCAGTGCAGAGGAGTTCTCTGACATCTCTGAGATGCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR CCA 90 bp GTTCTGCTCCCCTTCTCTGGGCAGGCTGACGAAGGCCTGCATGGCTaGGGAGAGGATGATGGTCCCACTGCTTGCCTGTCTAAGCAGACT +
Preference number: 1 (lower is better)
Translates to: VLLPFSGQADEGLHG*GEDDGPTACLSKQT
Trigger: AGTCTGCTTAGACAGGCAAGCAGTGGGACCATCATCCTCTCCCCAGCCATGCAGGCCTTCGTCAGCCTGCCCAGAGAAGGGGAGCAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR GCA 90 bp GAGTTCTGCCAAGGCCCGCATCTCAGAGATGTCAGAGAACTCCTCTaGACTGAAGTTCTGCTCCCCTTCTCTGGGCAGGCTGACGAAGGC +
Preference number: 1 (lower is better)
Translates to: EFCQGPHLRDVRELL*TEVLLPFSGQADEG
Trigger: GCCTTCGTCAGCCTGCCCAGAGAAGGGGAGCAGAACTTCAGTGCAGAGGAGTTCTCTGACATCTCTGAGATGCGGGCCTTGGCAGAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR CCA 90 bp CATGTTGGTGACAATGCTGCGGTTCTTCCGGTGACTCTCAGCTCCTaGCTTGTCCCTCTCGGGCTCTCCTTTTCTGGGAGTCTGCCTCTG +
Preference number: 1 (lower is better)
Translates to: HVGDNAAVLPVTLSS*LVPLGLSFSGSLPL
Trigger: CAGAGGCAGACTCCCAGAAAAGGAGAGCCCGAGAGGGACAAGCCAGGAGCTGAGAGTCACCGGAAGAACCGCAGCATTGTCACCAACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR GCA 90 bp GCTCTGTCACTCAGCCTGGAATGCTGTGGCAGGATCTTAGCTTACTaGAACCTCCGCCTCCCGGGATCAAGTTATTCTGCTGCCTCAGCC +
Preference number: 1 (lower is better)
Translates to: ALSLSLECCGRILAY*NLRLPGSSYSAASA
Trigger: GGCTGAGGCAGCAGAATAACTTGATCCCGGGAGGCGGAGGTTGCAGTAAGCTAAGATCCTGCCACAGCATTCCAGGCTGAGTGACAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR GCA 90 bp CCTCCCTCCTGGATCCTGGTATTCACAGCACAGTTGTTCCCTTCCTaGAAAGCAAAGTGCTACAGGGCATCATCCCCTTGGCCAGGCCCT +
Preference number: 1 (lower is better)
Translates to: PPSWILVFTAQLFPS*KAKCYRASSPWPGP
Trigger: AGGGCCTGGCCAAGGGGATGATGCCCTGTAGCACTTTGCTTTGCAGGAAGGGAACAACTGTGCTGTGAATACCAGGATCCAGGAGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR GCA 90 bp GCTCGCTCAGGTTTCGCTGCTCAGCACAGATCTCCAGGACGCAATTaGTGGTCTGCTTGGCCAACTCTTCCAGGAAGGAGTTGCAGTGGT +
Preference number: 1 (lower is better)
Translates to: ARSGFAAQHRSPGRN*WSAWPTLPGRSCSG
Trigger: ACCACTGCAACTCCTTCCTGGAAGAGTTGGCCAAGCAGACCAGCAATTGCGTCCTGGAGATCTGTGCTGAGCAGCGAAACCTGAGCGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR GCA 90 bp AGTGTGGTGATTGTCTGTTCCCCACAGGAATCCAGTGGTTGTGTCTaGTGCAGGAGGGCGTTGCGGATGACTCTGGAAGCATCTGCACCC +
Preference number: 1 (lower is better)
Translates to: SVVIVCSPQESSGCV*CRRALRMTLEASAP
Trigger: GGGTGCAGATGCTTCCAGAGTCATCCGCAACGCCCTCCTGCAGCAGACACAACCACTGGATTCCTGTGGGGAACAGACAATCACCACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR TCA 90 bp TTGCTGGTCTGCTTGGCCAACTCTTCCAGGAAGGAGTTGCAGTGGTaGAGACCATGGTTCTTGAGGTGGGGGTACTCCTCTGGGCACATC +
Preference number: 1 (lower is better)
Translates to: LLVCLANSSRKELQW*RPWFLRWGYSSGHI
Trigger: GATGTGCCCAGAGGAGTACCCCCACCTCAAGAACCATGGTCTTCACCACTGCAACTCCTTCCTGGAAGAGTTGGCCAAGCAGACCAGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR TCA 90 bp CACAGGAATCCAGTGGTTGTGTCTGCTGCAGGAGGGCGTTGCGGATaGCTCTGGAAGCATCTGCACCCAAAAACTGGGCCAGTGACTGTA +
Preference number: 1 (lower is better)
Translates to: HRNPVVVSAAGGRCG*LWKHLHPKTGPVTV
Trigger: TACAGTCACTGGCCCAGTTTTTGGGTGCAGATGCTTCCAGAGTCATCCGCAACGCCCTCCTGCAGCAGACACAACCACTGGATTCCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR GCA 90 bp GTGGTGATTGTCTGTTCCCCACAGGAATCCAGTGGTTGTGTCTGCTaGAGGAGGGCGTTGCGGATGACTCTGGAAGCATCTGCACCCAAA +
Preference number: 1 (lower is better)
Translates to: VVIVCSPQESSGCVC*RRALRMTLEASAPK
Trigger: TTTGGGTGCAGATGCTTCCAGAGTCATCCGCAACGCCCTCCTGCAGCAGACACAACCACTGGATTCCTGTGGGGAACAGACAATCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR CCA 90 bp GCCTTGTCCCTAGCTGGGGGACACAGATATACCCTCCCTCCCTCCTaGATCCTGGTATTCACAGCACAGTTGTTCCCTTCCTGCAAAGCA +
Preference number: 1 (lower is better)
Translates to: ALSLAGGHRYTLPPS*ILVFTAQLFPSCKA
Trigger: TGCTTTGCAGGAAGGGAACAACTGTGCTGTGAATACCAGGATCCAGGAGGGAGGGAGGGTATATCTGTGTCCCCCAGCTAGGGACAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR CCA 90 bp CGCTCAGGTTTCGCTGCTCAGCACAGATCTCCAGGACGCAATTGCTaGTCTGCTTGGCCAACTCTTCCAGGAAGGAGTTGCAGTGGTGAA +
Preference number: 1 (lower is better)
Translates to: RSGFAAQHRSPGRNC*SAWPTLPGRSCSGE
Trigger: TTCACCACTGCAACTCCTTCCTGGAAGAGTTGGCCAAGCAGACCAGCAATTGCGTCCTGGAGATCTGTGCTGAGCAGCGAAACCTGAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR CCA 90 bp GGTGACTCTCAGCTCCTGGCTTGTCCCTCTCGGGCTCTCCTTTTCTaGGAGTCTGCCTCTGCTTCCTGGTTTTCTTGTTCTTGGCTTTGC +
Preference number: 1 (lower is better)
Translates to: GDSQLLACPSRALLF*ESASASWFSCSWLC
Trigger: GCAAAGCCAAGAACAAGAAAACCAGGAAGCAGAGGCAGACTCCCAGAAAAGGAGAGCCCGAGAGGGACAAGCCAGGAGCTGAGAGTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR TCA 90 bp CCCTGTGGGGAGGAGGACTGGAAGAACACTCTTCCCCCAACCGCGTaGGTGCATTTCAGCCATGTGCCAGCTTCTTCTCAAAGTCAAACT +
Preference number: 1 (lower is better)
Translates to: PCGEEDWKNTLPPTA*VHFSHVPASSQSQT
Trigger: AGTTTGACTTTGAGAAGAAGCTGGCACATGGCTGAAATGCACTCACGCGGTTGGGGGAAGAGTGTTCTTCCAGTCCTCCTCCCCACAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR GCA 90 bp ATCCTGGTATTCACAGCACAGTTGTTCCCTTCCTGCAAAGCAAAGTaGTACAGGGCATCATCCCCTTGGCCAGGCCCTGGACCTTCTGCA +
Preference number: 1 (lower is better)
Translates to: ILVFTAQLFPSCKAK*YRASSPWPGPGPSA
Trigger: TGCAGAAGGTCCAGGGCCTGGCCAAGGGGATGATGCCCTGTAGCACTTTGCTTTGCAGGAAGGGAACAACTGTGCTGTGAATACCAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR GCA 90 bp ACAATGAGGTTCATCACCTTGGCTAAGTCAGGGTTCTCATGCAGGTaGAGAGGGGCCTTAGCCACGCTAGTGTATGCCTGTAGGCGGAAC +
Preference number: 1 (lower is better)
Translates to: TMRFITLAKSGFSCR*RGALATLVYACRRN
Trigger: GTTCCGCCTACAGGCATACACTAGCGTGGCTAAGGCCCCTCTGCACCTGCATGAGAACCCTGACTTAGCCAAGGTGATGAACCTCATTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR GCA 90 bp GACGAAGGCCTGCATGGCTGGGGAGAGGATGATGGTCCCACTGCTTaGCTGTCTAAGCAGACTTTCCAGGTACCAGTTTGTGTAGAGTGT +
Preference number: 1 (lower is better)
Translates to: DEGLHGWGEDDGPTA*LSKQTFQVPVCVEC
Trigger: ACACTCTACACAAACTGGTACCTGGAAAGTCTGCTTAGACAGGCAAGCAGTGGGACCATCATCCTCTCCCCAGCCATGCAGGCCTTCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR GCA 90 bp TCTGAGAGGTCACATGCCACATCAGGTTTTCACTCAGGAACTTCATaGCATAGGGGCCCAGGAGTTCTGCCAAGGCCCGCATCTCAGAGA +
Preference number: 1 (lower is better)
Translates to: SERSHATSGFHSGTS*HRGPGVLPRPASQR
Trigger: TCTCTGAGATGCGGGCCTTGGCAGAACTCCTGGGCCCCTATGGCATGAAGTTCCTGAGTGAAAACCTGATGTGGCATGTGACCTCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR GCA 90 bp AGCCACCAAGGCTGGGTCAATGTCACAGCCCACACCTGCAGCAGATaGCAGCTCAAAGATACTCAAGGTCACCTTGATGTCTGTGTCTGG +
Preference number: 1 (lower is better)
Translates to: SHQGWVNVTAHTCSR*QLKDTQGHLDVCVW
Trigger: CCAGACACAGACATCAAGGTGACCTTGAGTATCTTTGAGCTGGCATCTGCTGCAGGTGTGGGCTGTGACATTGACCCAGCCTTGGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR CCA 90 bp CTCCATGCTCCCAGCCTGCCTCACTGCTCTACGATTTCTCAGCCCTaGATTGTTCTTCCACAGATCTGCTCATCAACTCTGGCTCCTGAC +
Preference number: 1 (lower is better)
Translates to: LHAPSLPHCSTISQP*IVLPQICSSTLAPD
Trigger: GTCAGGAGCCAGAGTTGATGAGCAGATCTGTGGAAGAACAATCCAGGGCTGAGAAATCGTAGAGCAGTGAGGCAGGCTGGGAGCATGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
3UTR CCA 90 bp CACACCCAGTTCCTTCTGCACTTTGAAGCTGGCCCACCTGCCAACTaGATTGAACACCATGGCAGGGGAGGCAGTGTTTCTACTGTCCAA +
Preference number: 1 (lower is better)
Translates to: HTQFLLHFEAGPPAN*IEHHGRGGSVSTVQ
Trigger: TTGGACAGTAGAAACACTGCCTCCCCTGCCATGGTGTTCAATCCAGTTGGCAGGTGGGCCAGCTTCAAAGTGCAGAAGGAACTGGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR CCA 90 bp AGGGACTTCCCACCCTCTGTCCATCTACCTTTAGCACACATCCCTTaGCTTTTCCCCAGACCCAGCCAAGAAATGGCTGCATCTGAGACC +
Preference number: 1 (lower is better)
Translates to: RDFPPSVHLPLAHIP*LFPRPSQEMAASET
Trigger: GGTCTCAGATGCAGCCATTTCTTGGCTGGGTCTGGGGAAAAGCCAAGGGATGTGTGCTAAAGGTAGATGGACAGAGGGTGGGAAGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR CCA 90 bp TTCGCTGCTCAGCACAGATCTCCAGGACGCAATTGCTGGTCTGCTTaGCCAACTCTTCCAGGAAGGAGTTGCAGTGGTGAAGACCATGGT +
Preference number: 1 (lower is better)
Translates to: FAAQHRSPGRNCWSA*PTLPGRSCSGEDHG
Trigger: ACCATGGTCTTCACCACTGCAACTCCTTCCTGGAAGAGTTGGCCAAGCAGACCAGCAATTGCGTCCTGGAGATCTGTGCTGAGCAGCGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR CCA 90 bp GTTTGTGTAGAGTGTGGTGATTGTCTGTTCCCCACAGGAATCCAGTaGTTGTGTCTGCTGCAGGAGGGCGTTGCGGATGACTCTGGAAGC +
Preference number: 1 (lower is better)
Translates to: VCVECGDCLFPTGIQ*LCLLQEGVADDSGS
Trigger: GCTTCCAGAGTCATCCGCAACGCCCTCCTGCAGCAGACACAACCACTGGATTCCTGTGGGGAACAGACAATCACCACACTCTACACAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR CCA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTaGCAGGCATTCAGTTTAGGTGGAAGGCCCGAGACACCTCCCGAT +
Preference number: 1 (lower is better)
Translates to: YGKGLGRSKGLFSGY*QAFSLGGRPETPPD
Trigger: ATCGGGAGGTGTCTCGGGCCTTCCACCTAAACTGAATGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR CCA 90 bp CTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTaGGTACTGGCAGGCATTCAGTTTAGGTGGAAGGCCCGAGACACC +
Preference number: 1 (lower is better)
Translates to: LPLWQGFRKVQRALQ*VLAGIQFRWKARDT
Trigger: GGTGTCTCGGGCCTTCCACCTAAACTGAATGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR GCA 90 bp CCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTaGCTCACTGCTCTACGATTTCTCAGCCCTGGATTGTTCTTCCAC +
Preference number: 1 (lower is better)
Translates to: PRPNFFHKLSSMLPA*LTALRFLSPGLFFH
Trigger: GTGGAAGAACAATCCAGGGCTGAGAAATCGTAGAGCAGTGAGGCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
3UTR GCA 90 bp TGGAAGACAATGAGGTTCATCACCTTGGCTAAGTCAGGGTTCTCATaGAGGTGCAGAGGGGCCTTAGCCACGCTAGTGTATGCCTGTAGG +
Preference number: 1 (lower is better)
Translates to: WKTMRFITLAKSGFS*RCRGALATLVYACR
Trigger: CCTACAGGCATACACTAGCGTGGCTAAGGCCCCTCTGCACCTGCATGAGAACCCTGACTTAGCCAAGGTGATGAACCTCATTGTCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR GCA 90 bp GTGGGGAGGAGGACTGGAAGAACACTCTTCCCCCAACCGCGTGAGTaGATTTCAGCCATGTGCCAGCTTCTTCTCAAAGTCAAACTTTGT +
Preference number: 1 (lower is better)
Translates to: VGRRTGRTLFPQPRE*ISAMCQLLLKVKLC
Trigger: ACAAAGTTTGACTTTGAGAAGAAGCTGGCACATGGCTGAAATGCACTCACGCGGTTGGGGGAAGAGTGTTCTTCCAGTCCTCCTCCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR CCA 90 bp AGGAGGGCGTTGCGGATGACTCTGGAAGCATCTGCACCCAAAAACTaGGCCAGTGACTGTATGAAACCAATGTATGCTTTGACTCCTGCC +
Preference number: 1 (lower is better)
Translates to: RRALRMTLEASAPKN*ASDCMKPMYALTPA
Trigger: GGCAGGAGTCAAAGCATACATTGGTTTCATACAGTCACTGGCCCAGTTTTTGGGTGCAGATGCTTCCAGAGTCATCCGCAACGCCCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR TCA 90 bp CTCCTCAATCTCTCCAGAGCTGCAAACTCAGCTCAAGTTAACTTCTaGCTTCCTCAACCTGCAACCTGGCCTGCTGCTCCTGCTTCCTAT +
Preference number: 1 (lower is better)
Translates to: LLNLSRAANSAQVNF*LPQPATWPAAPASY
Trigger: ATAGGAAGCAGGAGCAGCAGGCCAGGTTGCAGGTTGAGGAAGTCAGAAGTTAACTTGAGCTGAGTTTGCAGCTCTGGAGAGATTGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR TCA 90 bp CCAGCAATTTTTCTACGGAGTCCAGCATTCGGGAGTGGAAGACAATaGGGTTCATCACCTTGGCTAAGTCAGGGTTCTCATGCAGGTGCA +
Preference number: 1 (lower is better)
Translates to: PAIFLRSPAFGSGRQ*GSSPWLSQGSHAGA
Trigger: TGCACCTGCATGAGAACCCTGACTTAGCCAAGGTGATGAACCTCATTGTCTTCCACTCCCGAATGCTGGACTCCGTAGAAAAATTGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR TCA 90 bp GTTGCGGATGACTCTGGAAGCATCTGCACCCAAAAACTGGGCCAGTaGCTGTATGAAACCAATGTATGCTTTGACTCCTGCCAACAGCTC +
Preference number: 1 (lower is better)
Translates to: VADDSGSICTQKLGQ*LYETNVCFDSCQQL
Trigger: GAGCTGTTGGCAGGAGTCAAAGCATACATTGGTTTCATACAGTCACTGGCCCAGTTTTTGGGTGCAGATGCTTCCAGAGTCATCCGCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR GCA 90 bp CCCCCTGCAGCAACTTGTCTTGCTGTCCTCTTAAGCAGTTCTATATaGAGATGCAGATGGAGGAGGGATCTCTATCCCCTCAAGCAGAAA +
Preference number: 1 (lower is better)
Translates to: PPAATCLAVLLSSSI*RCRWRRDLYPLKQK
Trigger: TTTCTGCTTGAGGGGATAGAGATCCCTCCTCCATCTGCATCTGCATATAGAACTGCTTAAGAGGACAGCAAGACAAGTTGCTGCAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR CCA 90 bp ATCCTTCTCAATGCTATAAAAGGAAGAAGGGTCAGTGGCAAGGAGTaGGAGGGAAACTGCCAGAAAGATCAAGAGCAGGCAGGCCACCTT +
Preference number: 1 (lower is better)
Translates to: ILLNAIKGRRVSGKE*EGNCQKDQEQAGHL
Trigger: AAGGTGGCCTGCCTGCTCTTGATCTTTCTGGCAGTTTCCCTCCCACTCCTTGCCACTGACCCTTCTTCCTTTTATAGCATTGAGAAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR CCA 90 bp AGAGAAATGGATTCTCGATTTCTGGTTTTAAGCTTGTCAGTCTCCTaGCCCAGCTGCAAGAGGCTGACAGAGGCCACCACCAGAAATTCC +
Preference number: 1 (lower is better)
Translates to: REMDSRFLVLSLSVS*PSCKRLTEATTRNS
Trigger: GGAATTTCTGGTGGTGGCCTCTGTCAGCCTCTTGCAGCTGGGCCAGGAGACTGACAAGCTTAAAACCAGAAATCGAGAATCCATTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR TCA 90 bp TGGGCCAATCAGTTGTCATGTAACCTAGAATTGACGGAGACTAACTaGCCCTCTGCTCTGGGTTGTGGAGATATCAAAGCAGGAGGGGTT +
Preference number: 1 (lower is better)
Translates to: WANQLSCNLELTETN*PSALGCGDIKAGGV
Trigger: AACCCCTCCTGCTTTGATATCTCCACAACCCAGAGCAGAGGGTCAGTTAGTCTCCGTCAATTCTAGGTTACATGACAACTGATTGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR TCA 90 bp TCCTGCTTCCTATTCAAGTGGGAGGGAGAGTACTTGACAACTCATTaGGGTGTGGGGGCTGAAGGGGGATTCATCTTCATCTCCTTTGAT +
Preference number: 1 (lower is better)
Translates to: SCFLFKWEGEYLTTH*GVGAEGGFIFISFD
Trigger: ATCAAAGGAGATGAAGATGAATCCCCCTTCAGCCCCCACACCTCAATGAGTTGTCAAGTACTCTCCCTCCCACTTGAATAGGAAGCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR GCA 90 bp GGCAGCCTCACAATCCTCTCCTTCCAAAGTGACAAGAGAAAAGTCTaGTCCTCAATCTCTCCAGAGCTGCAAACTCAGCTCAAGTTAACT +
Preference number: 1 (lower is better)
Translates to: GSLTILSFQSDKRKV*SSISPELQTQLKLT
Trigger: AGTTAACTTGAGCTGAGTTTGCAGCTCTGGAGAGATTGAGGAGCAGACTTTTCTCTTGTCACTTTGGAAGGAGAGGATTGTGAGGCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR CCA 90 bp GAAGTTTCCACCAGCAATTTTTCTACGGAGTCCAGCATTCGGGAGTaGAAGACAATGAGGTTCATCACCTTGGCTAAGTCAGGGTTCTCA +
Preference number: 1 (lower is better)
Translates to: EVSTSNFSTESSIRE*KTMRFITLAKSGFS
Trigger: TGAGAACCCTGACTTAGCCAAGGTGATGAACCTCATTGTCTTCCACTCCCGAATGCTGGACTCCGTAGAAAAATTGCTGGTGGAAACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR CCA 90 bp TGTTGTAACCATCCTTCTCAATGCTATAAAAGGAAGAAGGGTCAGTaGCAAGGAGTGGGAGGGAAACTGCCAGAAAGATCAAGAGCAGGC +
Preference number: 1 (lower is better)
Translates to: CCNHPSQCYKRKKGQ*QGVGGKLPERSRAG
Trigger: GCCTGCTCTTGATCTTTCTGGCAGTTTCCCTCCCACTCCTTGCCACTGACCCTTCTTCCTTTTATAGCATTGAGAAGGATGGTTACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR TCA 90 bp GAAGGAGGAGTGATCAGGAGAAGGTATTTACTCTGTTCTAAATACTaGGTGGAGGCTCCTCCTCTCCCAGTCAGAGAAGGAGAAAAGAAG +
Preference number: 1 (lower is better)
Translates to: EGGVIRRRYLLCSKY*VEAPPLPVREGEKK
Trigger: CTTCTTTTCTCCTTCTCTGACTGGGAGAGGAGGAGCCTCCACTCAGTATTTAGAACAGAGTAAATACCTTCTCCTGATCACTCCTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR GCA 90 bp CGCCAGCATTATCCTAAGAATAGTGATGAAGGTCGGAGAGGCCCATaGCTGTCAGAGCTCAAGCTCAAGTCACCAGAAGATAGAAAATAT +
Preference number: 1 (lower is better)
Translates to: RQHYPKNSDEGRRGP*LSELKLKSPEDRKY
Trigger: ATATTTTCTATCTTCTGGTGACTTGAGCTTGAGCTCTGACAGGCATGGGCCTCTCCGACCTTCATCACTATTCTTAGGATAATGCTGGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR GCA 90 bp GGAAGAACACTCTTCCCCCAACCGCGTGAGTGCATTTCAGCCATGTaGCAGCTTCTTCTCAAAGTCAAACTTTGTTGGAGAAGAACTAAT +
Preference number: 1 (lower is better)
Translates to: GRTLFPQPRECISAM*QLLLKVKLCWRRTN
Trigger: ATTAGTTCTTCTCCAACAAAGTTTGACTTTGAGAAGAAGCTGGCACATGGCTGAAATGCACTCACGCGGTTGGGGGAAGAGTGTTCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR CCA 90 bp TGTTTCTCCACTTCTCCCTGGCAGTGGATTCACAGAAGTGATGCATaGGGGCCACTATTTCCTGCCAAGGAGTTAAGTAAACCTAGTTTA +
Preference number: 1 (lower is better)
Translates to: CFSTSPWQWIHRSDA*GPLFPAKELSKPSL
Trigger: TAAACTAGGTTTACTTAACTCCTTGGCAGGAAATAGTGGCCCCCATGCATCACTTCTGTGAATCCACTGCCAGGGAGAAGTGGAGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR CCA 90 bp CAAAGTGAGCACAAATCAGGGGGAAAGCAATGGCATAACGCAACATaGCAGATTCCTCCAAGGTCATGGCAAACATCTTCTCAAAGATAC +
Preference number: 1 (lower is better)
Translates to: QSEHKSGGKQWHNAT*QIPPRSWQTSSQRY
Trigger: GTATCTTTGAGAAGATGTTTGCCATGACCTTGGAGGAATCTGCCATGTTGCGTTATGCCATTGCTTTCCCCCTGATTTGTGCTCACTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR GCA 90 bp GCAGCAACTTGTCTTGCTGTCCTCTTAAGCAGTTCTATATGCAGATaGAGATGGAGGAGGGATCTCTATCCCCTCAAGCAGAAAAATATA +
Preference number: 1 (lower is better)
Translates to: AATCLAVLLSSSICR*RWRRDLYPLKQKNI
Trigger: TATATTTTTCTGCTTGAGGGGATAGAGATCCCTCCTCCATCTGCATCTGCATATAGAACTGCTTAAGAGGACAGCAAGACAAGTTGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR TCA 90 bp GCAGGAGACAATAGCAGCTCCAGTGGGAGGATTATAAGCTCATTATaGTTTAATATGATGATTGATCATCTCTGCCCGCCAGCATTATCC +
Preference number: 1 (lower is better)
Translates to: AGDNSSSSGRIISSL*FNMMIDHLCPPALS
Trigger: GGATAATGCTGGCGGGCAGAGATGATCAATCATCATATTAAATCATAATGAGCTTATAATCCTCCCACTGGAGCTGCTATTGTCTCCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR TCA 90 bp CTATTTCCTGCCAAGGAGTTAAGTAAACCTAGTTTAGTGCTATCTTaGAAGCCCCCAGGCTCTGTGACGCTTGAAATTCTAATTAGCGCA +
Preference number: 1 (lower is better)
Translates to: LFPAKELSKPSLVLS*KPPGSVTLEILISA
Trigger: TGCGCTAATTAGAATTTCAAGCGTCACAGAGCCTGGGGGCTTTCAAGATAGCACTAAACTAGGTTTACTTAACTCCTTGGCAGGAAATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR TCA 90 bp ATTATCAACTTGTTTGAGATTCAGAGAGGAGAGGATACTGACGAATaGGGACATGATGATGGACTCCTCCTCTGGACACACAGACAAGTT +
Preference number: 1 (lower is better)
Translates to: IINLFEIQRGEDTDE*GHDDGLLLWTHRQV
Trigger: AACTTGTCTGTGTGTCCAGAGGAGGAGTCCATCATCATGTCCTCATTCGTCAGTATCCTCTCCTCTCTGAATCTCAAACAAGTTGATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR CCA 90 bp ACTTGTCTTGCTGTCCTCTTAAGCAGTTCTATATGCAGATGCAGATaGAGGAGGGATCTCTATCCCCTCAAGCAGAAAAATATAAACATA +
Preference number: 1 (lower is better)
Translates to: TCLAVLLSSSICRCR*RRDLYPLKQKNINI
Trigger: TATGTTTATATTTTTCTGCTTGAGGGGATAGAGATCCCTCCTCCATCTGCATCTGCATATAGAACTGCTTAAGAGGACAGCAAGACAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR TCA 90 bp TCAGAAGGGAAGATAGTATGTTCAAACACGGAGAAACTGTATACATaGTTCATTGTCAGTGCCAGTTCTGTCAAGTTTAGGTGTAGCTTG +
Preference number: 1 (lower is better)
Translates to: SEGKIVCSNTEKLYT*FIVSASSVKFRCSL
Trigger: CAAGCTACACCTAAACTTGACAGAACTGGCACTGACAATGAATCATGTATACAGTTTCTCCGTGTTTGAACATACTATCTTCCCTTCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR GCA 90 bp TCTCAACCTCATTCCTCTTGTTGCAATACAATCCCATTTCTACCTTaGTGCGTCTCTAAACAGATAAGAATTGGGTATACTTGTTCCACT +
Preference number: 1 (lower is better)
Translates to: SQPHSSCCNTIPFLP*CVSKQIRIGYTCST
Trigger: AGTGGAACAAGTATACCCAATTCTTATCTGTTTAGAGACGCAGCAAGGTAGAAATGGGATTGTATTGCAACAAGAGGAATGAGGTTGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR CCA 90 bp CTGAACAAGATCAGTAGATTATATCAATGTCAGTTATCCTGGTTGTaGCAGTGTACTACAGTTTTGCTAGATGTTAGCATTCAGGGAAAC +
Preference number: 1 (lower is better)
Translates to: LNKISRLYQCQLSWL*QCTTVLLDVSIQGN
Trigger: GTTTCCCTGAATGCTAACATCTAGCAAAACTGTAGTACACTGCCACAACCAGGATAACTGACATTGATATAATCTACTGATCTTGTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR-3UTR TCA 90 bp GCCGTACGATCTCCTGGGTCGTGGCATTGTAGCCAGCCAGCCACACAATGGCTCGAAGACCATGGTTCTTaGGGTGGGGGTACTCCTCTG +
Preference number: 2 (lower is better)
Translates to: AVRSPGSWHCSQPATQWLEDHGS*GGGTPL
Trigger: CAGAGGAGTACCCCCACCTCAAGAACCATGGTCTTC...GAGCCATTGTGTGGCTGGCTGGCTACAATGCCACGACCCAGGAGATCGTACGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR-3UTR TCA 90 bp CATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCCACCCCCTGCGAAAGTaGCCACAGCTTCCACTATGG +
Preference number: 2 (lower is better)
Translates to: HVAPRPNFFHKLSSMLPAHPLRK*PQLPLW
Trigger: CCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTG...GGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
3UTR-3UTR TCA 90 bp AGGGCGTTGCGGATGACTCTGGAAGCATCTGCACCCAAAAACTGGGCCAGTGACCACCCCCTGCGAAAGTaGCCACAGCTTCCACTATGG +
Preference number: 2 (lower is better)
Translates to: RALRMTLEASAPKNWASDHPLRK*PQLPLW
Trigger: CCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTG...GTCACTGGCCCAGTTTTTGGGTGCAGATGCTTCCAGAGTCATCCGCAACGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR-3UTR TCA 90 bp GCTCTTCAGTGGGTACTGGCAGGCATTCAGTTTAGGTGGAAGGCCCGAGACACCACACAATGGCTCTGTTaGGTCTGGCCTCCAGGTGGC +
Preference number: 2 (lower is better)
Translates to: ALQWVLAGIQFRWKARDTTQWLC*VWPPGG
Trigger: GCCACCTGGAGGCCAGACTCAACAGAGCCATTGTGT...GGTGTCTCGGGCCTTCCACCTAAACTGAATGCCTGCCAGTACCCACTGAAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR CAA 90 bp TGCTCGCTCAGGTTTCGCTGCTCAGCACAGATCTCCAGGACGCAATaGCTGGTCTGCTTGGCCAACTCTTCCAGGAAGGAGTTGCAGTGG +
Preference number: 2 (lower is better)
Translates to: CSLRFRCSAQISRTQ*LVCLANSSRKELQW
Trigger: CCACTGCAACTCCTTCCTGGAAGAGTTGGCCAAGCAGACCAGCAATTGCGTCCTGGAGATCTGTGCTGAGCAGCGAAACCTGAGCGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR CAA 90 bp TGTTCCCCACAGGAATCCAGTGGTTGTGTCTGCTGCAGGAGGGCGTaGCGGATGACTCTGGAAGCATCTGCACCCAAAAACTGGGCCAGT +
Preference number: 2 (lower is better)
Translates to: CSPQESSGCVCCRRA*RMTLEASAPKNWAS
Trigger: ACTGGCCCAGTTTTTGGGTGCAGATGCTTCCAGAGTCATCCGCAACGCCCTCCTGCAGCAGACACAACCACTGGATTCCTGTGGGGAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR-3UTR GCA 90 bp ACTCTCAGCTCCTGGCTTGTCCCTCTCGGGCTCTCCTTTTCTGGGAGTCTGCCTACGCAATTGCTGGTCTaGTTGGCCAACTCTTCCAGG +
Preference number: 2 (lower is better)
Translates to: TLSSWLVPLGLSFSGSLPTQLLV*LANSSR
Trigger: CCTGGAAGAGTTGGCCAAGCAGACCAGCAATTGCGT...AGGCAGACTCCCAGAAAAGGAGAGCCCGAGAGGGACAAGCCAGGAGCTGAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR-3UTR CCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCTCTGCTCATCAACTCTaGCTCCTGACCCTCTCTCCT +
Preference number: 2 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACSAHQL*LLTLSP
Trigger: AGGAGAGAGGGTCAGGAGCCAGAGTTGATGAGCAGA...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
3UTR-3UTR CCA 90 bp GAGTTCTGCCAAGGCCCGCATCTCAGAGATGTCAGAGAACTCCTCTGCACTGAAGAAGGCCTGCATGGCTaGGGAGAGGATGATGGTCCC +
Preference number: 2 (lower is better)
Translates to: EFCQGPHLRDVRELLCTEEGLHG*GEDDGP
Trigger: GGGACCATCATCCTCTCCCCAGCCATGCAGGCCTTC...TTCAGTGCAGAGGAGTTCTCTGACATCTCTGAGATGCGGGCCTTGGCAGAACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR CAA 90 bp ACGGAGTCCAGCATTCGGGAGTGGAAGACAATGAGGTTCATCACCTaGGCTAAGTCAGGGTTCTCATGCAGGTGCAGAGGGGCCTTAGCC +
Preference number: 2 (lower is better)
Translates to: TESSIREWKTMRFIT*AKSGFSCRCRGALA
Trigger: GGCTAAGGCCCCTCTGCACCTGCATGAGAACCCTGACTTAGCCAAGGTGATGAACCTCATTGTCTTCCACTCCCGAATGCTGGACTCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR-3UTR TCA 90 bp CACCACCAGCTTCTTCAGCTCCACAATCTGAGAGGTCACATGCCACATCAGGTTGGAGGGCGTTGCGGATaGCTCTGGAAGCATCTGCAC +
Preference number: 2 (lower is better)
Translates to: HHQLLQLHNLRGHMPHQVGGRCG*LWKHLH
Trigger: GTGCAGATGCTTCCAGAGTCATCCGCAACGCCCTCC...AACCTGATGTGGCATGTGACCTCTCAGATTGTGGAGCTGAAGAAGCTGGTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR-3UTR GCA 90 bp CTGCCAACAGCTCAGAAGGCCGTACGATCTCCTGGGTCGTGGCATTGTAGCCAGGGCACATCTCATGAGTaGAGTGGACAAAGTGAGCAC +
Preference number: 2 (lower is better)
Translates to: LPTAQKAVRSPGSWHCSQGTSHE*SGQSEH
Trigger: GTGCTCACTTTGTCCACTGCACTCATGAGATGTGCC...CTGGCTACAATGCCACGACCCAGGAGATCGTACGGCCTTCTGAGCTGTTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR-3UTR GCA 90 bp AGGGCGTTGCGGATGACTCTGGAAGCATCTGCACCCAAAAACTGGGCCAGTGACTCTCCAGGACGCAATTaGTGGTCTGCTTGGCCAACT +
Preference number: 2 (lower is better)
Translates to: RALRMTLEASAPKNWASDSPGRN*WSAWPT
Trigger: AGTTGGCCAAGCAGACCAGCAATTGCGTCCTGGAGA...GTCACTGGCCCAGTTTTTGGGTGCAGATGCTTCCAGAGTCATCCGCAACGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR-3UTR GCA 90 bp GAGAGGTCACATGCCACATCAGGTTTTCACTCAGGAACTTCATGCCATAGGGGCAGGCTGACGAAGGCCTaGATGGCTGGGGAGAGGATG +
Preference number: 2 (lower is better)
Translates to: ERSHATSGFHSGTSCHRGRLTKA*MAGERM
Trigger: CATCCTCTCCCCAGCCATGCAGGCCTTCGTCAGCCT...GCCCCTATGGCATGAAGTTCCTGAGTGAAAACCTGATGTGGCATGTGACCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR CAA 90 bp TGTGTAGAGTGTGGTGATTGTCTGTTCCCCACAGGAATCCAGTGGTaGTGTCTGCTGCAGGAGGGCGTTGCGGATGACTCTGGAAGCATC +
Preference number: 2 (lower is better)
Translates to: CVECGDCLFPTGIQW*CLLQEGVADDSGSI
Trigger: GATGCTTCCAGAGTCATCCGCAACGCCCTCCTGCAGCAGACACAACCACTGGATTCCTGTGGGGAACAGACAATCACCACACTCTACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR-3UTR TCA 90 bp GCTCTTCAGTGGGTACTGGCAGGCATTCAGTTTAGGTGGAAGGCCCGAGACACCAAGGAGTTGCAGTGGTaGAGACCATGGTTCTTGAGG +
Preference number: 2 (lower is better)
Translates to: ALQWVLAGIQFRWKARDTKELQW*RPWFLR
Trigger: CCTCAAGAACCATGGTCTTCACCACTGCAACTCCTT...GGTGTCTCGGGCCTTCCACCTAAACTGAATGCCTGCCAGTACCCACTGAAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR-3UTR GCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCGTTCTTCCACAGATCTaGTCATCAACTCTGGCTCCT +
Preference number: 2 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACVLPQI*SSTLAP
Trigger: AGGAGCCAGAGTTGATGAGCAGATCTGTGGAAGAAC...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
3UTR-3UTR GCA 90 bp TCTCGATTTCTGGTTTTAAGCTTGTCAGTCTCCTGGCCCAGCTGCAAGAGGCTGAGTGGTTGTGTCTGCTaGAGGAGGGCGTTGCGGATG +
Preference number: 2 (lower is better)
Translates to: SRFLVLSLSVSWPSCKRLSGCVC*RRALRM
Trigger: CATCCGCAACGCCCTCCTGCAGCAGACACAACCACT...CAGCCTCTTGCAGCTGGGCCAGGAGACTGACAAGCTTAAAACCAGAAATCGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR CAA 90 bp CCCAGTTCCTTCTGCACTTTGAAGCTGGCCCACCTGCCAACTGGATaGAACACCATGGCAGGGGAGGCAGTGTTTCTACTGTCCAAACAA +
Preference number: 2 (lower is better)
Translates to: PSSFCTLKLAHLPTG*NTMAGEAVFLLSKQ
Trigger: TTGTTTGGACAGTAGAAACACTGCCTCCCCTGCCATGGTGTTCAATCCAGTTGGCAGGTGGGCCAGCTTCAAAGTGCAGAAGGAACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR-3UTR GCA 90 bp CTCTTCCCCCAACCGCGTGAGTGCATTTCAGCCATGTGCCAGCTTCTTCTCAAATACCCTCCATCCCCCTaGAGCAACTTGTCTTGCTGT +
Preference number: 2 (lower is better)
Translates to: LFPQPRECISAMCQLLLKYPPSP*SNLSCC
Trigger: ACAGCAAGACAAGTTGCTGCAGGGGGATGGAGGGTA...TTTGAGAAGAAGCTGGCACATGGCTGAAATGCACTCACGCGGTTGGGGGAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR-3UTR GCA 90 bp TGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCATTAAGTCAGGGTTCTCATaGAGGTGCAGAGGGGCCTTA +
Preference number: 2 (lower is better)
Translates to: WQGFRKVQRALQWVLAGIKSGFS*RCRGAL
Trigger: TAAGGCCCCTCTGCACCTGCATGAGAACCCTGACTT...AATGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR-3UTR CCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCACGATTTCTCAGCCCTaGATTGTTCTTCCACAGATC +
Preference number: 2 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACTISQP*IVLPQI
Trigger: GATCTGTGGAAGAACAATCCAGGGCTGAGAAATCGT...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
3UTR CAA 90 bp GCACCCAAAAACTGGGCCAGTGACTGTATGAAACCAATGTATGCTTaGACTCCTGCCAACAGCTCAGAAGGCCGTACGATCTCCTGGGTC +
Preference number: 2 (lower is better)
Translates to: APKNWASDCMKPMYA*TPANSSEGRTISWV
Trigger: GACCCAGGAGATCGTACGGCCTTCTGAGCTGTTGGCAGGAGTCAAAGCATACATTGGTTTCATACAGTCACTGGCCCAGTTTTTGGGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR CAA 90 bp AAGCGCATGAGCAGAGAAATGGATTCTCGATTTCTGGTTTTAAGCTaGTCAGTCTCCTGGCCCAGCTGCAAGAGGCTGACAGAGGCCACC +
Preference number: 2 (lower is better)
Translates to: KRMSREMDSRFLVLS*SVSWPSCKRLTEAT
Trigger: GGTGGCCTCTGTCAGCCTCTTGCAGCTGGGCCAGGAGACTGACAAGCTTAAAACCAGAAATCGAGAATCCATTTCTCTGCTCATGCGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR-3UTR GCA 90 bp CAAGGTCACCTTGATGTCTGTGTCTGGAGTGACAAACTCCTTCAAGCACTCAATTCCAGTGGTTGTGTCTaGTGCAGGAGGGCGTTGCGG +
Preference number: 2 (lower is better)
Translates to: QGHLDVCVWSDKLLQALNSSGCV*CRRALR
Trigger: CCGCAACGCCCTCCTGCAGCAGACACAACCACTGGA...ATTGAGTGCTTGAAGGAGTTTGTCACTCCAGACACAGACATCAAGGTGACCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR-3UTR CCA 90 bp GAGAGGTCACATGCCACATCAGGTTTTCACTCAGGAACTTCATGCCATAGGGGCCCAGGACGCAATTGCTaGTCTGCTTGGCCAACTCTT +
Preference number: 2 (lower is better)
Translates to: ERSHATSGFHSGTSCHRGPGRNC*SAWPTL
Trigger: AAGAGTTGGCCAAGCAGACCAGCAATTGCGTCCTGG...GCCCCTATGGCATGAAGTTCCTGAGTGAAAACCTGATGTGGCATGTGACCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR-3UTR TCA 90 bp GAGAGGTCACATGCCACATCAGGTTTTCACTCAGGAACTTCATGCCATAGGGGCGTGCAGTGGACAAAGTaGGCACAAATCAGGGGGAAA +
Preference number: 2 (lower is better)
Translates to: ERSHATSGFHSGTSCHRGVQWTK*AQIRGK
Trigger: TTTCCCCCTGATTTGTGCTCACTTTGTCCACTGCAC...GCCCCTATGGCATGAAGTTCCTGAGTGAAAACCTGATGTGGCATGTGACCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR-3UTR GCA 90 bp CTCTTCCCCCAACCGCGTGAGTGCATTTCAGCCATGTGCCAGCTTCTTCTCAAAGTTCTTCCACAGATCTaGTCATCAACTCTGGCTCCT +
Preference number: 2 (lower is better)
Translates to: LFPQPRECISAMCQLLLKVLPQI*SSTLAP
Trigger: AGGAGCCAGAGTTGATGAGCAGATCTGTGGAAGAAC...TTTGAGAAGAAGCTGGCACATGGCTGAAATGCACTCACGCGGTTGGGGGAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR-3UTR GCA 90 bp GAGGCAGTGTTTCTACTGTCCAAACAAAAGGGGGCACCTATGCAAGTATCTTGCATAAGCTGTCCTCCATaGTCCCAGCCTGCCTCACTG +
Preference number: 2 (lower is better)
Translates to: EAVFLLSKQKGAPMQVSCISCPP*SQPASL
Trigger: CAGTGAGGCAGGCTGGGAGCATGGAGGACAGCTTAT...GCAAGATACTTGCATAGGTGCCCCCTTTTGTTTGGACAGTAGAAACACTGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR-3UTR GCA 90 bp ATAAGGGACTTCCCACCCTCTGTCCATCTACCTTTAGCACACATCCCTTGGCTTCTATATTGGCCAGGCTaGTCTCAAACCCCTGACCTC +
Preference number: 2 (lower is better)
Translates to: IRDFPPSVHLPLAHIPWLLYWPG*SQTPDL
Trigger: GAGGTCAGGGGTTTGAGAGCAGCCTGGCCAATATAG...AAGCCAAGGGATGTGTGCTAAAGGTAGATGGACAGAGGGTGGGAAGTCCCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR-3UTR GCA 90 bp CTCTTCCCCCAACCGCGTGAGTGCATTTCAGCCATGTGCCAGCTTCTTCTCAAAAGGGTTTCACTGTGTTaGCCAGAGTGGTCTCAAACT +
Preference number: 2 (lower is better)
Translates to: LFPQPRECISAMCQLLLKRVSLC*PEWSQT
Trigger: AGTTTGAGACCACTCTGGGCAACACAGTGAAACCCT...TTTGAGAAGAAGCTGGCACATGGCTGAAATGCACTCACGCGGTTGGGGGAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR-3UTR CCA 90 bp CTCTTCCCCCAACCGCGTGAGTGCATTTCAGCCATGTGCCAGCTTCTTCTCAAAACTTCTCCCTGGCAGTaGATTCACAGAAGTGATGCA +
Preference number: 2 (lower is better)
Translates to: LFPQPRECISAMCQLLLKTSPWQ*IHRSDA
Trigger: TGCATCACTTCTGTGAATCCACTGCCAGGGAGAAGT...TTTGAGAAGAAGCTGGCACATGGCTGAAATGCACTCACGCGGTTGGGGGAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR CAA 90 bp TTTCTGGGAGTCTGCCTCTGCTTCCTGGTTTTCTTGTTCTTGGCTTaGCTGATTGTAGTGGCACAGTGCTTAGGTAGAAGCTGCTCGCTC +
Preference number: 2 (lower is better)
Translates to: FLGVCLCFLVFLFLA*LIVVAQCLGRSCSL
Trigger: GAGCGAGCAGCTTCTACCTAAGCACTGTGCCACTACAATCAGCAAAGCCAAGAACAAGAAAACCAGGAAGCAGAGGCAGACTCCCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR CAA 90 bp TCGGGCTCTCCTTTTCTGGGAGTCTGCCTCTGCTTCCTGGTTTTCTaGTTCTTGGCTTTGCTGATTGTAGTGGCACAGTGCTTAGGTAGA +
Preference number: 2 (lower is better)
Translates to: SGSPFLGVCLCFLVF*FLALLIVVAQCLGR
Trigger: TCTACCTAAGCACTGTGCCACTACAATCAGCAAAGCCAAGAACAAGAAAACCAGGAAGCAGAGGCAGACTCCCAGAAAAGGAGAGCCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR-3UTR TCA 90 bp CTCTTCCCCCAACCGCGTGAGTGCATTTCAGCCATGTGCCAGCTTCTTCTCAAAGCAGTAGGAGCAGGTTaGATGTTTGCTGAACACATT +
Preference number: 2 (lower is better)
Translates to: LFPQPRECISAMCQLLLKAVGAG*MFAEHI
Trigger: AATGTGTTCAGCAAACATTCAACCTGCTCCTACTGC...TTTGAGAAGAAGCTGGCACATGGCTGAAATGCACTCACGCGGTTGGGGGAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR-3UTR TCA 90 bp GAGGCAGTGTTTCTACTGTCCAAACAAAAGGGGGCACCTATGCAAGTATCTTGCTTGACGGAGACTAACTaGCCCTCTGCTCTGGGTTGT +
Preference number: 2 (lower is better)
Translates to: EAVFLLSKQKGAPMQVSCLTETN*PSALGC
Trigger: ACAACCCAGAGCAGAGGGTCAGTTAGTCTCCGTCAA...GCAAGATACTTGCATAGGTGCCCCCTTTTGTTTGGACAGTAGAAACACTGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR-3UTR TCA 90 bp ATAAGGGACTTCCCACCCTCTGTCCATCTACCTTTAGCACACATCCCTTGGCTTGTGGATTCACAGAAGTaGTGCATGGGGGCCACTATT +
Preference number: 2 (lower is better)
Translates to: IRDFPPSVHLPLAHIPWLVDSQK*CMGATI
Trigger: AATAGTGGCCCCCATGCATCACTTCTGTGAATCCAC...AAGCCAAGGGATGTGTGCTAAAGGTAGATGGACAGAGGGTGGGAAGTCCCTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR-3UTR TCA 90 bp GTTCGCCATGTTGACCAGGCTGGTCTTAACCTCCTTAGCTCAAGAGATCCACTGGAGGGATCCTTGTGGTaGTGGAACTGTTCTGTATCT +
Preference number: 2 (lower is better)
Translates to: VRHVDQAGLNLLSSRDPLEGSLW*WNCSVS
Trigger: AGATACAGAACAGTTCCATCACCACAAGGATCCCTC...CAGTGGATCTCTTGAGCTAAGGAGGTTAAGACCAGCCTGGTCAACATGGCGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR-3UTR TCA 90 bp AGGACGCAATTGCTGGTCTGCTTGGCCAACTCTTCCAGGAAGGAGTTGCAGTGGGTCCAGCCTCAATCCTaGGAATTCAAATTTTTCTCC +
Preference number: 2 (lower is better)
Translates to: RTQLLVCLANSSRKELQWVQPQS*EFKFFS
Trigger: GGAGAAAAATTTGAATTCTCAGGATTGAGGCTGGAC...CCACTGCAACTCCTTCCTGGAAGAGTTGGCCAAGCAGACCAGCAATTGCGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR-3UTR CCA 90 bp CTCTTCCCCCAACCGCGTGAGTGCATTTCAGCCATGTGCCAGCTTCTTCTCAAAACGATTTCTCAGCCCTaGATTGTTCTTCCACAGATC +
Preference number: 2 (lower is better)
Translates to: LFPQPRECISAMCQLLLKTISQP*IVLPQI
Trigger: GATCTGTGGAAGAACAATCCAGGGCTGAGAAATCGT...TTTGAGAAGAAGCTGGCACATGGCTGAAATGCACTCACGCGGTTGGGGGAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR-3UTR CCA 90 bp CAAGGTCACCTTGATGTCTGTGTCTGGAGTGACAAACTCCTTCAAGCACTCAATCCCACAGGAATCCAGTaGTTGTGTCTGCTGCAGGAG +
Preference number: 2 (lower is better)
Translates to: QGHLDVCVWSDKLLQALNPTGIQ*LCLLQE
Trigger: CTCCTGCAGCAGACACAACCACTGGATTCCTGTGGG...ATTGAGTGCTTGAAGGAGTTTGTCACTCCAGACACAGACATCAAGGTGACCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR CAA 90 bp TCTCCTTTTCTGGGAGTCTGCCTCTGCTTCCTGGTTTTCTTGTTCTaGGCTTTGCTGATTGTAGTGGCACAGTGCTTAGGTAGAAGCTGC +
Preference number: 2 (lower is better)
Translates to: SPFLGVCLCFLVFLF*ALLIVVAQCLGRSC
Trigger: GCAGCTTCTACCTAAGCACTGTGCCACTACAATCAGCAAAGCCAAGAACAAGAAAACCAGGAAGCAGAGGCAGACTCCCAGAAAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR-3UTR CCA 90 bp ATAAGGGACTTCCCACCCTCTGTCCATCTACCTTTAGCACACATCCCTTGGCTTACTGACCCTCTGCTCTaGGTTGTGGAGATATCAAAG +
Preference number: 2 (lower is better)
Translates to: IRDFPPSVHLPLAHIPWLTDPLL*VVEISK
Trigger: CTTTGATATCTCCACAACCCAGAGCAGAGGGTCAGT...AAGCCAAGGGATGTGTGCTAAAGGTAGATGGACAGAGGGTGGGAAGTCCCTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR-3UTR CCA 90 bp CTCTTCCCCCAACCGCGTGAGTGCATTTCAGCCATGTGCCAGCTTCTTCTCAAAGAACATAAGCAAAACTaGGGAAGGAAATCTGAACAA +
Preference number: 2 (lower is better)
Translates to: LFPQPRECISAMCQLLLKEHKQN*GRKSEQ
Trigger: TTGTTCAGATTTCCTTCCCCAGTTTTGCTTATGTTC...TTTGAGAAGAAGCTGGCACATGGCTGAAATGCACTCACGCGGTTGGGGGAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR-3UTR CCA 90 bp CATCTCATGAGTGCAGTGGACAAAGTGAGCACAAATCAGGGGGAAAGCAATGGCATTCCTCCAAGGTCATaGCAAACATCTTCTCAAAGA +
Preference number: 2 (lower is better)
Translates to: HLMSAVDKVSTNQGESNGIPPRS*QTSSQR
Trigger: TCTTTGAGAAGATGTTTGCCATGACCTTGGAGGAAT...GCCATTGCTTTCCCCCTGATTTGTGCTCACTTTGTCCACTGCACTCATGAGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR-3UTR TCA 90 bp CATGAGTGCAGTGGACAAAGTGAGCACAAATCAGGGGGAAAGCAATGGCATAACCATTATCAACTTGTTTaGGATTCAGAGAGGAGAGGA +
Preference number: 2 (lower is better)
Translates to: HECSGQSEHKSGGKQWHNHYQLV*DSERRG
Trigger: TCCTCTCCTCTCTGAATCTCAAACAAGTTGATAATG...GTTATGCCATTGCTTTCCCCCTGATTTGTGCTCACTTTGTCCACTGCACTCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR-3UTR CCA 90 bp GAAGATAGTATGTTCAAACACGGAGAAACTGTATACATGATTCATTGTCAGTGCCCACAGCTTCCACTATaGCAAGGGTTTAGGAAGGTC +
Preference number: 2 (lower is better)
Translates to: EDSMFKHGETVYMIHCQCPQLPL*QGFRKV
Trigger: GACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG...GCACTGACAATGAATCATGTATACAGTTTCTCCGTGTTTGAACATACTATCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR CAA 90 bp AATCTGAACAAGATCAGTAGATTATATCAATGTCAGTTATCCTGGTaGTGGCAGTGTACTACAGTTTTGCTAGATGTTAGCATTCAGGGA +
Preference number: 2 (lower is better)
Translates to: NLNKISRLYQCQLSW*WQCTTVLLDVSIQG
Trigger: TCCCTGAATGCTAACATCTAGCAAAACTGTAGTACACTGCCACAACCAGGATAACTGACATTGATATAATCTACTGATCTTGTTCAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR CAA 90 bp CAAAACAATTGGGGTGAGATTTCTGATATCCATTCTTTAGTTCCTTaGGGCCTAAGTAAAGCAAACTTACAACCTGGGACACAACTTATT +
Preference number: 2 (lower is better)
Translates to: QNNWGEISDIHSLVP*GLSKANLQPGTQLI
Trigger: AATAAGTTGTGTCCCAGGTTGTAAGTTTGCTTTACTTAGGCCCAAAGGAACTAAAGAATGGATATCAGAAATCTCACCCCAATTGTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR CCA 72 bp CCCTTCTCTGGGCAGGCTGACGAAGGCCTGCATGGCTaGGGAGAGGATGATGGTCCCACTGCTTGCCTGTCT +
Preference number: 3 (lower is better)
Translates to: PFSGQADEGLHG*GEDDGPTACLS
Trigger: AGACAGGCAAGCAGTGGGACCATCATCCTCTCCCCAGCCATGCAGGCCTTCGTCAGCCTGCCCAGAGAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR GCA 72 bp TTCTGCTCCCCTTCTCTGGGCAGGCTGACGAAGGCCTaGATGGCTGGGGAGAGGATGATGGTCCCACTGCTT +
Preference number: 3 (lower is better)
Translates to: FCSPSLGRLTKA*MAGERMMVPLL
Trigger: AAGCAGTGGGACCATCATCCTCTCCCCAGCCATGCAGGCCTTCGTCAGCCTGCCCAGAGAAGGGGAGCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR TCA 72 bp CCAGTGGTTGTGTCTGCTGCAGGAGGGCGTTGCGGATaGCTCTGGAAGCATCTGCACCCAAAAACTGGGCCA +
Preference number: 3 (lower is better)
Translates to: PVVVSAAGGRCG*LWKHLHPKTGP
Trigger: TGGCCCAGTTTTTGGGTGCAGATGCTTCCAGAGTCATCCGCAACGCCCTCCTGCAGCAGACACAACCACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR CCA 72 bp GACAATGCTGCGGTTCTTCCGGTGACTCTCAGCTCCTaGCTTGTCCCTCTCGGGCTCTCCTTTTCTGGGAGT +
Preference number: 3 (lower is better)
Translates to: DNAAVLPVTLSS*LVPLGLSFSGS
Trigger: ACTCCCAGAAAAGGAGAGCCCGAGAGGGACAAGCCAGGAGCTGAGAGTCACCGGAAGAACCGCAGCATTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR CCA 72 bp GGGCAGTGGGAGGAGAAAACCTCCCGAAGTCCCTCTTaGGCCATGGCCCTGAAACTGAGGATAACCCCAATG +
Preference number: 3 (lower is better)
Translates to: GQWEEKTSRSPS*AMALKLRITPM
Trigger: CATTGGGGTTATCCTCAGTTTCAGGGCCATGGCCCAAGAGGGACTTCGGGAGGTTTTCTCCTCCCACTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR-3UTR CAA 90 bp AGGGCGTTGCGGATGACTCTGGAAGCATCTGCACCCAAAAACTGGGCCAGTGACATCTCCAGGACGCAATaGCTGGTCTGCTTGGCCAAC +
Preference number: 3 (lower is better)
Translates to: RALRMTLEASAPKNWASDISRTQ*LVCLAN
Trigger: GTTGGCCAAGCAGACCAGCAATTGCGTCCTGGAGAT...GTCACTGGCCCAGTTTTTGGGTGCAGATGCTTCCAGAGTCATCCGCAACGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR-3UTR CAA 90 bp CACCACCAGCTTCTTCAGCTCCACAATCTGAGAGGTCACATGCCACATCAGGTTCTCTCAGCTCCTGGCTaGTCCCTCTCGGGCTCTCCT +
Preference number: 3 (lower is better)
Translates to: HHQLLQLHNLRGHMPHQVLSAPG*SLSGSP
Trigger: AGGAGAGCCCGAGAGGGACAAGCCAGGAGCTGAGAG...AACCTGATGTGGCATGTGACCTCTCAGATTGTGGAGCTGAAGAAGCTGGTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR-3UTR CAA 90 bp GAGTTCTGCCAAGGCCCGCATCTCAGAGATGTCAGAGAACTCCTCTGCACTGAATGCTGCAGGAGGGCGTaGCGGATGACTCTGGAAGCA +
Preference number: 3 (lower is better)
Translates to: EFCQGPHLRDVRELLCTECCRRA*RMTLEA
Trigger: TGCTTCCAGAGTCATCCGCAACGCCCTCCTGCAGCA...TTCAGTGCAGAGGAGTTCTCTGACATCTCTGAGATGCGGGCCTTGGCAGAACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR GCA 72 bp TCAGAGATGTCAGAGAACTCCTCTGCACTGAAGTTCTaGTCCCCTTCTCTGGGCAGGCTGACGAAGGCCTGC +
Preference number: 3 (lower is better)
Translates to: SEMSENSSALKF*SPSLGRLTKAC
Trigger: GCAGGCCTTCGTCAGCCTGCCCAGAGAAGGGGAGCAGAACTTCAGTGCAGAGGAGTTCTCTGACATCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR GCA 72 bp CAAGGCCCGCATCTCAGAGATGTCAGAGAACTCCTCTaGACTGAAGTTCTGCTCCCCTTCTCTGGGCAGGCT +
Preference number: 3 (lower is better)
Translates to: QGPHLRDVRELL*TEVLLPFSGQA
Trigger: AGCCTGCCCAGAGAAGGGGAGCAGAACTTCAGTGCAGAGGAGTTCTCTGACATCTCTGAGATGCGGGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR CCA 72 bp GAGTGTGGTGATTGTCTGTTCCCCACAGGAATCCAGTaGTTGTGTCTGCTGCAGGAGGGCGTTGCGGATGAC +
Preference number: 3 (lower is better)
Translates to: ECGDCLFPTGIQ*LCLLQEGVADD
Trigger: GTCATCCGCAACGCCCTCCTGCAGCAGACACAACCACTGGATTCCTGTGGGGAACAGACAATCACCACACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR TCA 72 bp CCAGGAAGGAGTTGCAGTGGTGAAGACCATGGTTCTTaGGGTGGGGGTACTCCTCTGGGCACATCTCATGAG +
Preference number: 3 (lower is better)
Translates to: PGRSCSGEDHGS*GGGTPLGTSHE
Trigger: CTCATGAGATGTGCCCAGAGGAGTACCCCCACCTCAAGAACCATGGTCTTCACCACTGCAACTCCTTCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR GCA 72 bp TTCACAGCACAGTTGTTCCCTTCCTGCAAAGCAAAGTaGTACAGGGCATCATCCCCTTGGCCAGGCCCTGGA +
Preference number: 3 (lower is better)
Translates to: FTAQLFPSCKAK*YRASSPWPGPG
Trigger: TCCAGGGCCTGGCCAAGGGGATGATGCCCTGTAGCACTTTGCTTTGCAGGAAGGGAACAACTGTGCTGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR GCA 72 bp TGCTCAGCACAGATCTCCAGGACGCAATTGCTGGTCTaGTTGGCCAACTCTTCCAGGAAGGAGTTGCAGTGG +
Preference number: 3 (lower is better)
Translates to: CSAQISRTQLLV*LANSSRKELQW
Trigger: CCACTGCAACTCCTTCCTGGAAGAGTTGGCCAAGCAGACCAGCAATTGCGTCCTGGAGATCTGTGCTGAGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR GCA 72 bp GGTTTCGCTGCTCAGCACAGATCTCCAGGACGCAATTaGTGGTCTGCTTGGCCAACTCTTCCAGGAAGGAGT +
Preference number: 3 (lower is better)
Translates to: GFAAQHRSPGRN*WSAWPTLPGRS
Trigger: ACTCCTTCCTGGAAGAGTTGGCCAAGCAGACCAGCAATTGCGTCCTGGAGATCTGTGCTGAGCAGCGAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR GCA 72 bp CAGTGCTTAGGTAGAAGCTGCTCGCTCAGGTTTCGCTaGTCAGCACAGATCTCCAGGACGCAATTGCTGGTC +
Preference number: 3 (lower is better)
Translates to: QCLGRSCSLRFR*SAQISRTQLLV
Trigger: GACCAGCAATTGCGTCCTGGAGATCTGTGCTGAGCAGCGAAACCTGAGCGAGCAGCTTCTACCTAAGCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR GCA 72 bp ATTGTCTGTTCCCCACAGGAATCCAGTGGTTGTGTCTaGTGCAGGAGGGCGTTGCGGATGACTCTGGAAGCA +
Preference number: 3 (lower is better)
Translates to: IVCSPQESSGCV*CRRALRMTLEA
Trigger: TGCTTCCAGAGTCATCCGCAACGCCCTCCTGCAGCAGACACAACCACTGGATTCCTGTGGGGAACAGACAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR GCA 72 bp ACTCAGGAACTTCATGCCATAGGGGCCCAGGAGTTCTaGCAAGGCCCGCATCTCAGAGATGTCAGAGAACTC +
Preference number: 3 (lower is better)
Translates to: TQELHAIGAQEF*QGPHLRDVREL
Trigger: GAGTTCTCTGACATCTCTGAGATGCGGGCCTTGGCAGAACTCCTGGGCCCCTATGGCATGAAGTTCCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR GCA 72 bp TCACATGCCACATCAGGTTTTCACTCAGGAACTTCATaGCATAGGGGCCCAGGAGTTCTGCCAAGGCCCGCA +
Preference number: 3 (lower is better)
Translates to: SHATSGFHSGTS*HRGPGVLPRPA
Trigger: TGCGGGCCTTGGCAGAACTCCTGGGCCCCTATGGCATGAAGTTCCTGAGTGAAAACCTGATGTGGCATGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR CCA 72 bp CTAGCTGGGGGACACAGATATACCCTCCCTCCCTCCTaGATCCTGGTATTCACAGCACAGTTGTTCCCTTCC +
Preference number: 3 (lower is better)
Translates to: LAGGHRYTLPPS*ILVFTAQLFPS
Trigger: GGAAGGGAACAACTGTGCTGTGAATACCAGGATCCAGGAGGGAGGGAGGGTATATCTGTGTCCCCCAGCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR CCA 72 bp TTCGCTGCTCAGCACAGATCTCCAGGACGCAATTGCTaGTCTGCTTGGCCAACTCTTCCAGGAAGGAGTTGC +
Preference number: 3 (lower is better)
Translates to: FAAQHRSPGRNC*SAWPTLPGRSC
Trigger: GCAACTCCTTCCTGGAAGAGTTGGCCAAGCAGACCAGCAATTGCGTCCTGGAGATCTGTGCTGAGCAGCGAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR-3UTR CAA 90 bp GCCGTACGATCTCCTGGGTCGTGGCATTGTAGCCAGCCAGCCACACAATGGCTCTTCTTGTTCTTGGCTTaGCTGATTGTAGTGGCACAG +
Preference number: 3 (lower is better)
Translates to: AVRSPGSWHCSQPATQWLFLFLA*LIVVAQ
Trigger: CTGTGCCACTACAATCAGCAAAGCCAAGAACAAGAA...GAGCCATTGTGTGGCTGGCTGGCTACAATGCCACGACCCAGGAGATCGTACGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR-3UTR CAA 90 bp CACCACCAGCTTCTTCAGCTCCACAATCTGAGAGGTCACATGCCACATCAGGTTCACACAATGGCTCTGTaGAGTCTGGCCTCCAGGTGG +
Preference number: 3 (lower is better)
Translates to: HHQLLQLHNLRGHMPHQVHTMAL*SLASRW
Trigger: CCACCTGGAGGCCAGACTCAACAGAGCCATTGTGTG...AACCTGATGTGGCATGTGACCTCTCAGATTGTGGAGCTGAAGAAGCTGGTGGTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR TCA 72 bp GAGGAGGACTGGAAGAACACTCTTCCCCCAACCGCGTaGGTGCATTTCAGCCATGTGCCAGCTTCTTCTCAA +
Preference number: 3 (lower is better)
Translates to: EEDWKNTLPPTA*VHFSHVPASSQ
Trigger: TTGAGAAGAAGCTGGCACATGGCTGAAATGCACTCACGCGGTTGGGGGAAGAGTGTTCTTCCAGTCCTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR TCA 72 bp TGCTTGGCCAACTCTTCCAGGAAGGAGTTGCAGTGGTaGAGACCATGGTTCTTGAGGTGGGGGTACTCCTCT +
Preference number: 3 (lower is better)
Translates to: CLANSSRKELQW*RPWFLRWGYSS
Trigger: AGAGGAGTACCCCCACCTCAAGAACCATGGTCTTCACCACTGCAACTCCTTCCTGGAAGAGTTGGCCAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR TCA 72 bp GAAACAGGACTCCAGCATGTCCAGGGTCAGGAAGGATaGCTCCTCCACCACCAAGCGCATGAGCAGAGAAAT +
Preference number: 3 (lower is better)
Translates to: ETGLQHVQGQEG*LLHHQAHEQRN
Trigger: ATTTCTCTGCTCATGCGCTTGGTGGTGGAGGAGTCATCCTTCCTGACCCTGGACATGCTGGAGTCCTGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR GCA 72 bp CCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATaGTCCCAGCCTGCCTCACTGCTCTACGATTTCTCA +
Preference number: 3 (lower is better)
Translates to: PHALTFSISCPP*SQPASLLYDFS
Trigger: TGAGAAATCGTAGAGCAGTGAGGCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
3UTR GCA 72 bp CTCAGCCTGGAATGCTGTGGCAGGATCTTAGCTTACTaGAACCTCCGCCTCCCGGGATCAAGTTATTCTGCT +
Preference number: 3 (lower is better)
Translates to: LSLECCGRILAY*NLRLPGSSYSA
Trigger: AGCAGAATAACTTGATCCCGGGAGGCGGAGGTTGCAGTAAGCTAAGATCCTGCCACAGCATTCCAGGCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR GCA 72 bp CTGACTTCCTCAACCTGCAACCTGGCCTGCTGCTCCTaGTTCCTATTCAAGTGGGAGGGAGAGTACTTGACA +
Preference number: 3 (lower is better)
Translates to: LTSSTCNLACCS*FLFKWEGEYLT
Trigger: TGTCAAGTACTCTCCCTCCCACTTGAATAGGAAGCAGGAGCAGCAGGCCAGGTTGCAGGTTGAGGAAGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR GCA 72 bp CTGCATGGCTGGGGAGAGGATGATGGTCCCACTGCTTaGCTGTCTAAGCAGACTTTCCAGGTACCAGTTTGT +
Preference number: 3 (lower is better)
Translates to: LHGWGEDDGPTA*LSKQTFQVPVC
Trigger: ACAAACTGGTACCTGGAAAGTCTGCTTAGACAGGCAAGCAGTGGGACCATCATCCTCTCCCCAGCCATGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR GCA 72 bp GGCTGGGTCAATGTCACAGCCCACACCTGCAGCAGATaGCAGCTCAAAGATACTCAAGGTCACCTTGATGTC +
Preference number: 3 (lower is better)
Translates to: GWVNVTAHTCSR*QLKDTQGHLDV
Trigger: GACATCAAGGTGACCTTGAGTATCTTTGAGCTGGCATCTGCTGCAGGTGTGGGCTGTGACATTGACCCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR CCA 72 bp TTCCTTCTGCACTTTGAAGCTGGCCCACCTGCCAACTaGATTGAACACCATGGCAGGGGAGGCAGTGTTTCT +
Preference number: 3 (lower is better)
Translates to: FLLHFEAGPPAN*IEHHGRGGSVS
Trigger: AGAAACACTGCCTCCCCTGCCATGGTGTTCAATCCAGTTGGCAGGTGGGCCAGCTTCAAAGTGCAGAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR CCA 72 bp CCACCCTCTGTCCATCTACCTTTAGCACACATCCCTTaGCTTTTCCCCAGACCCAGCCAAGAAATGGCTGCA +
Preference number: 3 (lower is better)
Translates to: PPSVHLPLAHIP*LFPRPSQEMAA
Trigger: TGCAGCCATTTCTTGGCTGGGTCTGGGGAAAAGCCAAGGGATGTGTGCTAAAGGTAGATGGACAGAGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR CCA 72 bp GATTCTCGATTTCTGGTTTTAAGCTTGTCAGTCTCCTaGCCCAGCTGCAAGAGGCTGACAGAGGCCACCACC +
Preference number: 3 (lower is better)
Translates to: DSRFLVLSLSVS*PSCKRLTEATT
Trigger: GGTGGTGGCCTCTGTCAGCCTCTTGCAGCTGGGCCAGGAGACTGACAAGCTTAAAACCAGAAATCGAGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR CCA 72 bp TGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTaGGTACTGGCAGGCATTCAGTTTAGGTGGAAGGCC +
Preference number: 3 (lower is better)
Translates to: WQGFRKVQRALQ*VLAGIQFRWKA
Trigger: GGCCTTCCACCTAAACTGAATGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR-3UTR CAA 90 bp CTCTTCCCCCAACCGCGTGAGTGCATTTCAGCCATGTGCCAGCTTCTTCTCAAAAAAAGAGGGGCTCCTTaGCTGCTACTCTGCAGTAGG +
Preference number: 3 (lower is better)
Translates to: LFPQPRECISAMCQLLLKKRGAP*LLLCSR
Trigger: CCTACTGCAGAGTAGCAGCAAAGGAGCCCCTCTTTT...TTTGAGAAGAAGCTGGCACATGGCTGAAATGCACTCACGCGGTTGGGGGAAGAG
53% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR GCA 72 bp AGGACTGGAAGAACACTCTTCCCCCAACCGCGTGAGTaGATTTCAGCCATGTGCCAGCTTCTTCTCAAAGTC +
Preference number: 3 (lower is better)
Translates to: RTGRTLFPQPRE*ISAMCQLLLKV
Trigger: GACTTTGAGAAGAAGCTGGCACATGGCTGAAATGCACTCACGCGGTTGGGGGAAGAGTGTTCTTCCAGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR GCA 72 bp TTTCTGGTTTTAAGCTTGTCAGTCTCCTGGCCCAGCTaGAAGAGGCTGACAGAGGCCACCACCAGAAATTCC +
Preference number: 3 (lower is better)
Translates to: FLVLSLSVSWPS*KRLTEATTRNS
Trigger: GGAATTTCTGGTGGTGGCCTCTGTCAGCCTCTTGCAGCTGGGCCAGGAGACTGACAAGCTTAAAACCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR CCA 72 bp AGCCACACAATGGCTCTGTTGAGTCTGGCCTCCAGGTaGCTGCTGAGGTACTCAGAAGGGAAGATAGTATGT +
Preference number: 3 (lower is better)
Translates to: SHTMALLSLASR*LLRYSEGKIVC
Trigger: ACATACTATCTTCCCTTCTGAGTACCTCAGCAGCCACCTGGAGGCCAGACTCAACAGAGCCATTGTGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR-3UTR CAA 90 bp GAGTTCTGCCAAGGCCCGCATCTCAGAGATGTCAGAGAACTCCTCTGCACTGAATGTAGCTTGTCCATGTaGGTGACAATGCTGCGGTTC +
Preference number: 3 (lower is better)
Translates to: EFCQGPHLRDVRELLCTECSLSM*VTMLRF
Trigger: GAACCGCAGCATTGTCACCAACATGGACAAGCTACA...TTCAGTGCAGAGGAGTTCTCTGACATCTCTGAGATGCGGGCCTTGGCAGAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR TCA 72 bp GCTTTTCCCCAGACCCAGCCAAGAAATGGCTGCATCTaGGACCCTAGTCACACTCCTACACAGTCCATTTCT +
Preference number: 3 (lower is better)
Translates to: AFPQTQPRNGCI*DPSHTPTQSIS
Trigger: AGAAATGGACTGTGTAGGAGTGTGACTAGGGTCTCAGATGCAGCCATTTCTTGGCTGGGTCTGGGGAAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR GCA 72 bp TGGATCCTGGTATTCACAGCACAGTTGTTCCCTTCCTaGAAAGCAAAGTGCTACAGGGCATCATCCCCTTGG +
Preference number: 3 (lower is better)
Translates to: WILVFTAQLFPS*KAKCYRASSPW
Trigger: CCAAGGGGATGATGCCCTGTAGCACTTTGCTTTGCAGGAAGGGAACAACTGTGCTGTGAATACCAGGATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR CCA 72 bp AAACTCCTTCAAGCACTCAATGGGACCCATAAGAAATaGGCAGTGGGAGGAGAAAACCTCCCGAAGTCCCTC +
Preference number: 3 (lower is better)
Translates to: KLLQALNGTHKK*AVGGENLPKSL
Trigger: GAGGGACTTCGGGAGGTTTTCTCCTCCCACTGCCCATTTCTTATGGGTCCCATTGAGTGCTTGAAGGAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR-3UTR CAA 90 bp GAGGCAGTGTTTCTACTGTCCAAACAAAAGGGGGCACCTATGCAAGTATCTTGCACCCTCTGCTCTGGGTaGTGGAGATATCAAAGCAGG +
Preference number: 3 (lower is better)
Translates to: EAVFLLSKQKGAPMQVSCTLCSG*WRYQSR
Trigger: CCTGCTTTGATATCTCCACAACCCAGAGCAGAGGGT...GCAAGATACTTGCATAGGTGCCCCCTTTTGTTTGGACAGTAGAAACACTGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR-3UTR CAA 90 bp GTTCGCCATGTTGACCAGGCTGGTCTTAACCTCCTTAGCTCAAGAGATCCACTGCACGCCCGGCTAGTTTaGGTATTTTTAGTAGAGACG +
Preference number: 3 (lower is better)
Translates to: VRHVDQAGLNLLSSRDPLHARLV*VFLVET
Trigger: CGTCTCTACTAAAAATACCAAAACTAGCCGGGCGTG...CAGTGGATCTCTTGAGCTAAGGAGGTTAAGACCAGCCTGGTCAACATGGCGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR-3UTR CAA 90 bp CTCTTCCCCCAACCGCGTGAGTGCATTTCAGCCATGTGCCAGCTTCTTCTCAAAGGTAAAGGAAGCAAATaGCCTGAAATGCTGATGGGT +
Preference number: 3 (lower is better)
Translates to: LFPQPRECISAMCQLLLKGKGSK*PEMLMG
Trigger: ACCCATCAGCATTTCAGGCAATTTGCTTCCTTTACC...TTTGAGAAGAAGCTGGCACATGGCTGAAATGCACTCACGCGGTTGGGGGAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR-3UTR CAA 90 bp TCTCGATTTCTGGTTTTAAGCTTGTCAGTCTCCTGGCCCAGCTGCAAGAGGCTGATGAGGTTCATCACCTaGGCTAAGTCAGGGTTCTCA +
Preference number: 3 (lower is better)
Translates to: SRFLVLSLSVSWPSCKRLMRFIT*AKSGFS
Trigger: TGAGAACCCTGACTTAGCCAAGGTGATGAACCTCAT...CAGCCTCTTGCAGCTGGGCCAGGAGACTGACAAGCTTAAAACCAGAAATCGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR TCA 72 bp ACTTGTAACAAACAATGTAGTAGAGTAGGTGGGCAGTaGACATCTCTGAAGGGCACTTCCTCCTTGCCCCAG +
Preference number: 3 (lower is better)
Translates to: TCNKQCSRVGGQ*TSLKGTSSLPQ
Trigger: CTGGGGCAAGGAGGAAGTGCCCTTCAGAGATGTTCACTGCCCACCTACTCTACTACATTGTTTGTTACAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR TCA 72 bp TTTCTACGGAGTCCAGCATTCGGGAGTGGAAGACAATaGGGTTCATCACCTTGGCTAAGTCAGGGTTCTCAT +
Preference number: 3 (lower is better)
Translates to: FLRSPAFGSGRQ*GSSPWLSQGSH
Trigger: ATGAGAACCCTGACTTAGCCAAGGTGATGAACCTCATTGTCTTCCACTCCCGAATGCTGGACTCCGTAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR GCA 72 bp TATCCTAAGAATAGTGATGAAGGTCGGAGAGGCCCATaGCTGTCAGAGCTCAAGCTCAAGTCACCAGAAGAT +
Preference number: 3 (lower is better)
Translates to: YPKNSDEGRRGP*LSELKLKSPED
Trigger: ATCTTCTGGTGACTTGAGCTTGAGCTCTGACAGGCATGGGCCTCTCCGACCTTCATCACTATTCTTAGGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR GCA 72 bp TGTCTTGCTGTCCTCTTAAGCAGTTCTATATGCAGATaGAGATGGAGGAGGGATCTCTATCCCCTCAAGCAG +
Preference number: 3 (lower is better)
Translates to: CLAVLLSSSICR*RWRRDLYPLKQ
Trigger: CTGCTTGAGGGGATAGAGATCCCTCCTCCATCTGCATCTGCATATAGAACTGCTTAAGAGGACAGCAAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR CCA 72 bp AGTGGACAAAGTGAGCACAAATCAGGGGGAAAGCAATaGCATAACGCAACATGGCAGATTCCTCCAAGGTCA +
Preference number: 3 (lower is better)
Translates to: SGQSEHKSGGKQ*HNATWQIPPRS
Trigger: TGACCTTGGAGGAATCTGCCATGTTGCGTTATGCCATTGCTTTCCCCCTGATTTGTGCTCACTTTGTCCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR-3UTR CAA 90 bp CTCTTCCCCCAACCGCGTGAGTGCATTTCAGCCATGTGCCAGCTTCTTCTCAAATGCCCAGCTAATTTTTaGTATTTTTGGAGAGACAGG +
Preference number: 3 (lower is better)
Translates to: LFPQPRECISAMCQLLLKCPANF*YFWRDR
Trigger: CCTGTCTCTCCAAAAATACAAAAAATTAGCTGGGCA...TTTGAGAAGAAGCTGGCACATGGCTGAAATGCACTCACGCGGTTGGGGGAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR TCA 72 bp GTGATCAGGAGAAGGTATTTACTCTGTTCTAAATACTaGGTGGAGGCTCCTCCTCTCCCAGTCAGAGAAGGA +
Preference number: 3 (lower is better)
Translates to: VIRRRYLLCSKY*VEAPPLPVREG
Trigger: TCCTTCTCTGACTGGGAGAGGAGGAGCCTCCACTCAGTATTTAGAACAGAGTAAATACCTTCTCCTGATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR TCA 72 bp TTGTTTGAGATTCAGAGAGGAGAGGATACTGACGAATaGGGACATGATGATGGACTCCTCCTCTGGACACAC +
Preference number: 3 (lower is better)
Translates to: LFEIQRGEDTDE*GHDDGLLLWTH
Trigger: GTGTGTCCAGAGGAGGAGTCCATCATCATGTCCTCATTCGTCAGTATCCTCTCCTCTCTGAATCTCAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR CCA 72 bp ACCAGCAATTTTTCTACGGAGTCCAGCATTCGGGAGTaGAAGACAATGAGGTTCATCACCTTGGCTAAGTCA +
Preference number: 3 (lower is better)
Translates to: TSNFSTESSIRE*KTMRFITLAKS
Trigger: TGACTTAGCCAAGGTGATGAACCTCATTGTCTTCCACTCCCGAATGCTGGACTCCGTAGAAAAATTGCTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR CCA 72 bp TTGCGGATGACTCTGGAAGCATCTGCACCCAAAAACTaGGCCAGTGACTGTATGAAACCAATGTATGCTTTG +
Preference number: 3 (lower is better)
Translates to: LRMTLEASAPKN*ASDCMKPMYAL
Trigger: CAAAGCATACATTGGTTTCATACAGTCACTGGCCCAGTTTTTGGGTGCAGATGCTTCCAGAGTCATCCGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR TCA 72 bp CAGTTGTCATGTAACCTAGAATTGACGGAGACTAACTaGCCCTCTGCTCTGGGTTGTGGAGATATCAAAGCA +
Preference number: 3 (lower is better)
Translates to: QLSCNLELTETN*PSALGCGDIKA
Trigger: TGCTTTGATATCTCCACAACCCAGAGCAGAGGGTCAGTTAGTCTCCGTCAATTCTAGGTTACATGACAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR CCA 72 bp GCTGTCCTCTTAAGCAGTTCTATATGCAGATGCAGATaGAGGAGGGATCTCTATCCCCTCAAGCAGAAAAAT +
Preference number: 3 (lower is better)
Translates to: AVLLSSSICRCR*RRDLYPLKQKN
Trigger: ATTTTTCTGCTTGAGGGGATAGAGATCCCTCCTCCATCTGCATCTGCATATAGAACTGCTTAAGAGGACAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR CCA 72 bp TCAGGAGAAGGTATTTACTCTGTTCTAAATACTGAGTaGAGGCTCCTCCTCTCCCAGTCAGAGAAGGAGAAA +
Preference number: 3 (lower is better)
Translates to: SGEGIYSVLNTE*RLLLSQSEKEK
Trigger: TTTCTCCTTCTCTGACTGGGAGAGGAGGAGCCTCCACTCAGTATTTAGAACAGAGTAAATACCTTCTCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR-3UTR CAA 90 bp TCTGGAGTGACAAACTCCTTCAAGCACTCAATGGGACCCATAAGAAATGGGCAGTGTATACATGATTCATaGTCAGTGCCAGTTCTGTCA +
Preference number: 3 (lower is better)
Translates to: SGVTNSFKHSMGPIRNGQCIHDS*SVPVLS
Trigger: TGACAGAACTGGCACTGACAATGAATCATGTATACA...CTGCCCATTTCTTATGGGTCCCATTGAGTGCTTGAAGGAGTTTGTCACTCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR TCA 72 bp GCCAAGGAGTTAAGTAAACCTAGTTTAGTGCTATCTTaGAAGCCCCCAGGCTCTGTGACGCTTGAAATTCTA +
Preference number: 3 (lower is better)
Translates to: AKELSKPSLVLS*KPPGSVTLEIL
Trigger: TAGAATTTCAAGCGTCACAGAGCCTGGGGGCTTTCAAGATAGCACTAAACTAGGTTTACTTAACTCCTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR GCA 72 bp GCCCCAGGCCTTGTGGGAGGCATAATTCCATCTCATTaGTGCAAGCAAGTTAATGGAGATGTTAATAAAAAC +
Preference number: 3 (lower is better)
Translates to: APGLVGGIIPSH*CKQVNGDVNKN
Trigger: GTTTTTATTAACATCTCCATTAACTTGCTTGCAGCAATGAGATGGAATTATGCCTCCCACAAGGCCTGGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR GCA 72 bp CATTCCTCTTGTTGCAATACAATCCCATTTCTACCTTaGTGCGTCTCTAAACAGATAAGAATTGGGTATACT +
Preference number: 3 (lower is better)
Translates to: HSSCCNTIPFLP*CVSKQIRIGYT
Trigger: AGTATACCCAATTCTTATCTGTTTAGAGACGCAGCAAGGTAGAAATGGGATTGTATTGCAACAAGAGGAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR TCA 72 bp AAGATAGTATGTTCAAACACGGAGAAACTGTATACATaGTTCATTGTCAGTGCCAGTTCTGTCAAGTTTAGG +
Preference number: 3 (lower is better)
Translates to: KIVCSNTEKLYT*FIVSASSVKFR
Trigger: CCTAAACTTGACAGAACTGGCACTGACAATGAATCATGTATACAGTTTCTCCGTGTTTGAACATACTATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR-3UTR CAA 90 bp AGAAGGGAAGATAGTATGTTCAAACACGGAGAAACTGTATACATGATTCATTGTTTCTCCATTATCAACTaGTTTGAGATTCAGAGAGGA +
Preference number: 3 (lower is better)
Translates to: RREDSMFKHGETVYMIHCFSIIN*FEIQRG
Trigger: TCCTCTCTGAATCTCAAACAAGTTGATAATGGAGAA...ACAATGAATCATGTATACAGTTTCTCCGTGTTTGAACATACTATCTTCCCTTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR CCA 72 bp ATCAGTAGATTATATCAATGTCAGTTATCCTGGTTGTaGCAGTGTACTACAGTTTTGCTAGATGTTAGCATT +
Preference number: 3 (lower is better)
Translates to: ISRLYQCQLSWL*QCTTVLLDVSI
Trigger: AATGCTAACATCTAGCAAAACTGTAGTACACTGCCACAACCAGGATAACTGACATTGATATAATCTACTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR CCA 72 bp AACAAGATCAGTAGATTATATCAATGTCAGTTATCCTaGTTGTGGCAGTGTACTACAGTTTTGCTAGATGTT +
Preference number: 3 (lower is better)
Translates to: NKISRLYQCQLS*LWQCTTVLLDV
Trigger: AACATCTAGCAAAACTGTAGTACACTGCCACAACCAGGATAACTGACATTGATATAATCTACTGATCTTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR TCA 72 bp ACTTGGGTCCCAGTTCTAGTTCTACTGCTAAACATGTaGCCTTCATTAAGTCATTTAATATTTCTAAATCTG +
Preference number: 3 (lower is better)
Translates to: TWVPVLVLLLNM*PSLSHLIFLNL
Trigger: CAGATTTAGAAATATTAAATGACTTAATGAAGGTCACATGTTTAGCAGTAGAACTAGAACTGGGACCCAAGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCGTCTCCTGGCCCAGCTaGAAGAGGCTGACAGAGGCC +
Preference number: 4 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACVSWPS*KRLTEA
Trigger: GGCCTCTGTCAGCCTCTTGCAGCTGGGCCAGGAGAC...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR TCA 90 bp GCCGTACGATCTCCTGGGTCGTGGCATTGTAGCCAGCCAGCCACACAATGGCTCCCTCCAGGTGGCTGCTaGGGTACTCAGAAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: AVRSPGSWHCSQPATQWLPPGGC*GTQKGR
Trigger: TCTTCCCTTCTGAGTACCTCAGCAGCCACCTGGAGG...GAGCCATTGTGTGGCTGGCTGGCTACAATGCCACGACCCAGGAGATCGTACGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp AAGGCCTGCATGGCTGGGGAGAGGATGATGGTCCCACTGCTTGCCTGTCTAAGCGGAGGGCGTTGCGGATaGCTCTGGAAGCATCTGCAC +
Preference number: 4 (lower is better)
Translates to: KACMAGERMMVPLLACLSGGRCG*LWKHLH
Trigger: GTGCAGATGCTTCCAGAGTCATCCGCAACGCCCTCC...GCTTAGACAGGCAAGCAGTGGGACCATCATCCTCTCCCCAGCCATGCAGGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCCAGGGTCAGGAAGGATaGCTCCTCCACCACCAAGCG +
Preference number: 4 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACQGQEG*LLHHQA
Trigger: CGCTTGGTGGTGGAGGAGTCATCCTTCCTGACCCTG...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCCGATCTCCTGGGTCGTaGCATTGTAGCCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACRSPGS*HCSQPA
Trigger: GGCTGGCTGGCTACAATGCCACGACCCAGGAGATCG...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CCA 90 bp GGTGGAAGGCCCGAGACACCTCCCGATAGGCATTTCGAAGCAGGACATAAGGGATCAGCCCCTGTCAGCTaGGGCAGCAGGGAAGCCATC +
Preference number: 4 (lower is better)
Translates to: GGRPETPPDRHFEAGHKGSAPVS*GSREAI
Trigger: GATGGCTTCCCTGCTGCCCCAGCTGACAGGGGCTGA...TCCCTTATGTCCTGCTTCGAAATGCCTATCGGGAGGTGTCTCGGGCCTTCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCGGCAGCCACCAAGGCTaGGTCAATGTCACAGCCCAC +
Preference number: 4 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACGSHQG*VNVTAH
Trigger: GTGGGCTGTGACATTGACCCAGCCTTGGTGGCTGCC...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR TCA 90 bp CATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCGGAGGGCGTTGCGGATaGCTCTGGAAGCATCTGCAC +
Preference number: 4 (lower is better)
Translates to: HVAPRPNFFHKLSSMLPAGGRCG*LWKHLH
Trigger: GTGCAGATGCTTCCAGAGTCATCCGCAACGCCCTCC...GGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp GCCGTACGATCTCCTGGGTCGTGGCATTGTAGCCAGCCAGCCACACAATGGCTCTCGCTCAGGTTTCGCTaGTCAGCACAGATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: AVRSPGSWHCSQPATQWLSLRFR*SAQISR
Trigger: CCTGGAGATCTGTGCTGAGCAGCGAAACCTGAGCGA...GAGCCATTGTGTGGCTGGCTGGCTACAATGCCACGACCCAGGAGATCGTACGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR GCA 90 bp CATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTCCAGTGGTTGTGTCTaGTGCAGGAGGGCGTTGCGG +
Preference number: 4 (lower is better)
Translates to: HVAPRPNFFHKLSSMLPASSGCV*CRRALR
Trigger: CCGCAACGCCCTCCTGCAGCAGACACAACCACTGGA...GGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGAGGCTGACGAAGGCCTaGATGGCTGGGGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRRLTKA*MAGERM
Trigger: CATCCTCTCCCCAGCCATGCAGGCCTTCGTCAGCCT...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR GCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCCTGACTTCCTCAACCTaGAACCTGGCCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACLTSST*NLACCS
Trigger: GGAGCAGCAGGCCAGGTTGCAGGTTGAGGAAGTCAG...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCCCAGACGGGCAAAACTaGGGTCACCATGCCCATGCA +
Preference number: 4 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACPDGQN*GHHAHA
Trigger: TGCATGGGCATGGTGACCCCAGTTTTGCCCGTCTGG...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CCA 90 bp CTGCCAACAGCTCAGAAGGCCGTACGATCTCCTGGGTCGTGGCATTGTAGCCAGCCAGACGGGCAAAACTaGGGTCACCATGCCCATGCA +
Preference number: 4 (lower is better)
Translates to: LPTAQKAVRSPGSWHCSQPDGQN*GHHAHA
Trigger: TGCATGGGCATGGTGACCCCAGTTTTGCCCGTCTGG...CTGGCTACAATGCCACGACCCAGGAGATCGTACGGCCTTCTGAGCTGTTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CCA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTTCAGCCCCTGTCAGCTaGGGCAGCAGGGAAGCCATC +
Preference number: 4 (lower is better)
Translates to: MWPHALTFSISCPPCSQPSAPVS*GSREAI
Trigger: GATGGCTTCCCTGCTGCCCCAGCTGACAGGGGCTGA...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCAGCTTGTCAGTCTCCTaGCCCAGCTGCAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACSLSVS*PSCKRL
Trigger: CAGCCTCTTGCAGCTGGGCCAGGAGACTGACAAGCT...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR TCA 90 bp CTGCCAACAGCTCAGAAGGCCGTACGATCTCCTGGGTCGTGGCATTGTAGCCAGCGGATGAGAACCCCCTaGCCGCGATCATTCAGGATA +
Preference number: 4 (lower is better)
Translates to: LPTAQKAVRSPGSWHCSQRMRTP*PRSFRI
Trigger: TATCCTGAATGATCGCGGTCAGGGGGTTCTCATCCG...CTGGCTACAATGCCACGACCCAGGAGATCGTACGGCCTTCTGAGCTGTTGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp AAGGCCTGCATGGCTGGGGAGAGGATGATGGTCCCACTGCTTGCCTGTCTAAGCGAAGACCATGGTTCTTaGGGTGGGGGTACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: KACMAGERMMVPLLACLSEDHGS*GGGTPL
Trigger: CAGAGGAGTACCCCCACCTCAAGAACCATGGTCTTC...GCTTAGACAGGCAAGCAGTGGGACCATCATCCTCTCCCCAGCCATGCAGGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGCCTCCAGGTGGCTGCTaGGGTACTCAGAAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRPPGGC*GTQKGR
Trigger: TCTTCCCTTCTGAGTACCTCAGCAGCCACCTGGAGG...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp TGTGTCTGCTGCAGGAGGGCGTTGCGGATGACTCTGGAAGCATCTGCACCCAAAACACAATGGCTCTGTTaGGTCTGGCCTCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: CVCCRRALRMTLEASAPKTQWLC*VWPPGG
Trigger: GCCACCTGGAGGCCAGACTCAACAGAGCCATTGTGT...TTTGGGTGCAGATGCTTCCAGAGTCATCCGCAACGCCCTCCTGCAGCAGACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGCACCCCCTGCGAAAGTaGCCACAGCTTCCACTATGG +
Preference number: 4 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRHPLRK*PQLPLW
Trigger: CCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTG...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR GCA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTTGGGCACTGCGCCACTaGTCAGCCCCCTGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: MWPHALTFSISCPPCSQPWALRH*SAPWFL
Trigger: AAGAAACCAGGGGGCTGAGCAGTGGCGCAGTGCCCA...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp CCCATTCCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGGTTCTCATGCAGGTaGAGAGGGGCCTTAGCCACG +
Preference number: 4 (lower is better)
Translates to: PIPTPCESDHSFHYGKGLGFSCR*RGALAT
Trigger: CGTGGCTAAGGCCCCTCTGCACCTGCATGAGAACCC...TAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGGGTTCTCATGCAGGTaGAGAGGGGCCTTAGCCACG +
Preference number: 4 (lower is better)
Translates to: MWPHALTFSISCPPCSQPGFSCR*RGALAT
Trigger: CGTGGCTAAGGCCCCTCTGCACCTGCATGAGAACCC...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCTCGCTCAGGTTTCGCTaGTCAGCACAGATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACSLRFR*SAQISR
Trigger: CCTGGAGATCTGTGCTGAGCAGCGAAACCTGAGCGA...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCTCTGCACTGAAGTTCTaGTCCCCTTCTCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACSALKF*SPSLGR
Trigger: CCTGCCCAGAGAAGGGGAGCAGAACTTCAGTGCAGA...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp CCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGGGGCCCAGGAGTTCTaGCAAGGCCCGCATCTCAGA +
Preference number: 4 (lower is better)
Translates to: PQLPLWQGFRKVQRALQWGAQEF*QGPHLR
Trigger: TCTGAGATGCGGGCCTTGGCAGAACTCCTGGGCCCC...CCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR GCA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGGTCGGAGAGGCCCATaGCTGTCAGAGCTCAAGCTC +
Preference number: 4 (lower is better)
Translates to: MWPHALTFSISCPPCSQPGRRGP*LSELKL
Trigger: GAGCTTGAGCTCTGACAGGCATGGGCCTCTCCGACC...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CCA 90 bp ACTCTCAGCTCCTGGCTTGTCCCTCTCGGGCTCTCCTTTTCTGGGAGTCTGCCTGTGGGGGTACTCCTCTaGGCACATCTCATGAGTGCA +
Preference number: 4 (lower is better)
Translates to: TLSSWLVPLGLSFSGSLPVGVLL*AHLMSA
Trigger: TGCACTCATGAGATGTGCCCAGAGGAGTACCCCCAC...AGGCAGACTCCCAGAAAAGGAGAGCCCGAGAGGGACAAGCCAGGAGCTGAGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CCA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGTGACTCTCAGCTCCTaGCTTGTCCCTCTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: MWPHALTFSISCPPCSQPVTLSS*LVPLGL
Trigger: GAGCCCGAGAGGGACAAGCCAGGAGCTGAGAGTCAC...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CCA 90 bp AGGACGCAATTGCTGGTCTGCTTGGCCAACTCTTCCAGGAAGGAGTTGCAGTGGGAAGGCCTGCATGGCTaGGGAGAGGATGATGGTCCC +
Preference number: 4 (lower is better)
Translates to: RTQLLVCLANSSRKELQWEGLHG*GEDDGP
Trigger: GGGACCATCATCCTCTCCCCAGCCATGCAGGCCTTC...CCACTGCAACTCCTTCCTGGAAGAGTTGGCCAAGCAGACCAGCAATTGCGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CCA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCATCAGCCCCTGTCAGCTaGGGCAGCAGGGAAGCCATC +
Preference number: 4 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQASAPVS*GSREAI
Trigger: GATGGCTTCCCTGCTGCCCCAGCTGACAGGGGCTGA...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp CATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTCCCGAAGTCCCTCTTaGGCCATGGCCCTGAAACTG +
Preference number: 4 (lower is better)
Translates to: HVAPRPNFFHKLSSMLPASRSPS*AMALKL
Trigger: CAGTTTCAGGGCCATGGCCCAAGAGGGACTTCGGGA...GGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CCA 90 bp AGGGCGTTGCGGATGACTCTGGAAGCATCTGCACCCAAAAACTGGGCCAGTGACTCCCGAAGTCCCTCTTaGGCCATGGCCCTGAAACTG +
Preference number: 4 (lower is better)
Translates to: RALRMTLEASAPKNWASDSRSPS*AMALKL
Trigger: CAGTTTCAGGGCCATGGCCCAAGAGGGACTTCGGGA...GTCACTGGCCCAGTTTTTGGGTGCAGATGCTTCCAGAGTCATCCGCAACGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCGAAACGCAGTCAAGCTaGGGGCAAAGGAAGAGACCC +
Preference number: 4 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACETQSS*GQRKRP
Trigger: GGGTCTCTTCCTTTGCCCCCAGCTTGACTGCGTTTC...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp CATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCGAAGACCATGGTTCTTaGGGTGGGGGTACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: HVAPRPNFFHKLSSMLPAEDHGS*GGGTPL
Trigger: CAGAGGAGTACCCCCACCTCAAGAACCATGGTCTTC...GGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR TCA 90 bp CACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGCTGCGGTTCTTCCGGTaGCTCTCAGCTCCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: HSFHYGKGLGRSKGLFSGLRFFR*LSAPGL
Trigger: CAAGCCAGGAGCTGAGAGTCACCGGAAGAACCGCAG...CCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCACCAGCTGCAAGAGGCTaGCAGAGGCCACCACCAGAA +
Preference number: 4 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQAPAARG*QRPPPE
Trigger: TTCTGGTGGTGGCCTCTGTCAGCCTCTTGCAGCTGG...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp CCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGCCAGCTGCAAGAGGCTaGCAGAGGCCACCACCAGAA +
Preference number: 4 (lower is better)
Translates to: PQLPLWQGFRKVQRALQWPAARG*QRPPPE
Trigger: TTCTGGTGGTGGCCTCTGTCAGCCTCTTGCAGCTGG...CCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp CACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGCCAGCTGCAAGAGGCTaGCAGAGGCCACCACCAGAA +
Preference number: 4 (lower is better)
Translates to: HYGKGLGRSKGLFSGYWQPAARG*QRPPPE
Trigger: TTCTGGTGGTGGCCTCTGTCAGCCTCTTGCAGCTGG...CTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTCACCCCCTGCGAAAGTaGCCACAGCTTCCACTATGG +
Preference number: 4 (lower is better)
Translates to: MWPHALTFSISCPPCSQPHPLRK*PQLPLW
Trigger: CCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTG...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR TCA 90 bp CTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGACCCCTGACCTCAGGTaGTCCACCTGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LPLWQGFRKVQRALQWVLTPDLR*STCLGL
Trigger: GAGGCCAAGGCAGGTGGATCACCTGAGGTCAGGGGT...CAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp CCCATTCCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTACTGCTCTCAAACCCCTaGCCTCAGGTGATCCACCTG +
Preference number: 4 (lower is better)
Translates to: PIPTPCESDHSFHYGKGLLLSNP*PQVIHL
Trigger: CAGGTGGATCACCTGAGGTCAGGGGTTTGAGAGCAG...TAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp CCCATTCCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAACCTGCCAACTGGATTaGACACCATGGCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: PIPTPCESDHSFHYGKGLTCQLD*TPWQGR
Trigger: CCTCCCCTGCCATGGTGTTCAATCCAGTTGGCAGGT...TAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp CCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGTGGGCACTGCGCCACTaGTCAGCCCCCTGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: PQLPLWQGFRKVQRALQWWALRH*SAPWFL
Trigger: AAGAAACCAGGGGGCTGAGCAGTGGCGCAGTGCCCA...CCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR GCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCTCCTCGGTGACTTTGTaGACCTGCAGCACATCCTCA +
Preference number: 4 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACSSVTL*TCSTSS
Trigger: TGAGGATGTGCTGCAGGTGCACAAAGTCACCGAGGA...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp CCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGGGTTCTCATGCAGGTaGAGAGGGGCCTTAGCCACG +
Preference number: 4 (lower is better)
Translates to: PQLPLWQGFRKVQRALQWGFSCR*RGALAT
Trigger: CGTGGCTAAGGCCCCTCTGCACCTGCATGAGAACCC...CCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR GCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCAAGTCAGGGTTCTCATaGAGGTGCAGAGGGGCCTTA +
Preference number: 4 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACKSGFS*RCRGAL
Trigger: TAAGGCCCCTCTGCACCTGCATGAGAACCCTGACTT...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCTCTCCAGGACGCAATTaGTGGTCTGCTTGGCCAACT +
Preference number: 4 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACSPGRN*WSAWPT
Trigger: AGTTGGCCAAGCAGACCAGCAATTGCGTCCTGGAGA...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCGACTCTGGAAGCATCTaGACCCAAAAACTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACDSGSI*TQKLGQ
Trigger: CTGGCCCAGTTTTTGGGTGCAGATGCTTCCAGAGTC...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp CCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGTCCAGTGGTTGTGTCTaGTGCAGGAGGGCGTTGCGG +
Preference number: 4 (lower is better)
Translates to: PQLPLWQGFRKVQRALQWSSGCV*CRRALR
Trigger: CCGCAACGCCCTCCTGCAGCAGACACAACCACTGGA...CCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR GCA 90 bp CCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGAGGCTGACGAAGGCCTaGATGGCTGGGGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: PQLPLWQGFRKVQRALQWRLTKA*MAGERM
Trigger: CATCCTCTCCCCAGCCATGCAGGCCTTCGTCAGCCT...CCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR GCA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCTGCACTGAAGTTCTaGTCCCCTTCTCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRSALKF*SPSLGR
Trigger: CCTGCCCAGAGAAGGGGAGCAGAACTTCAGTGCAGA...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR GCA 90 bp ACTCTCAGCTCCTGGCTTGTCCCTCTCGGGCTCTCCTTTTCTGGGAGTCTGCCTGTCAGAGAACTCCTCTaGACTGAAGTTCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: TLSSWLVPLGLSFSGSLPVRELL*TEVLLP
Trigger: GGGGAGCAGAACTTCAGTGCAGAGGAGTTCTCTGAC...AGGCAGACTCCCAGAAAAGGAGAGCCCGAGAGGGACAAGCCAGGAGCTGAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR GCA 90 bp GTTCGCCATGTTGACCAGGCTGGTCTTAACCTCCTTAGCTCAAGAGATCCACTGGGGGCCCAGGAGTTCTaGCAAGGCCCGCATCTCAGA +
Preference number: 4 (lower is better)
Translates to: VRHVDQAGLNLLSSRDPLGAQEF*QGPHLR
Trigger: TCTGAGATGCGGGCCTTGGCAGAACTCCTGGGCCCC...CAGTGGATCTCTTGAGCTAAGGAGGTTAAGACCAGCCTGGTCAACATGGCGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp CATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCGTCACAGCCCACACCTaGAGCAGATGCCAGCTCAAA +
Preference number: 4 (lower is better)
Translates to: HVAPRPNFFHKLSSMLPAVTAHT*SRCQLK
Trigger: TTTGAGCTGGCATCTGCTGCAGGTGTGGGCTGTGAC...GGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp CTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGTCTCCTGGCCCAGCTaGAAGAGGCTGACAGAGGCC +
Preference number: 4 (lower is better)
Translates to: LPLWQGFRKVQRALQWVLVSWPS*KRLTEA
Trigger: GGCCTCTGTCAGCCTCTTGCAGCTGGGCCAGGAGAC...CAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR GCA 90 bp GAGAGGTCACATGCCACATCAGGTTTTCACTCAGGAACTTCATGCCATAGGGGCGTCTCCTGGCCCAGCTaGAAGAGGCTGACAGAGGCC +
Preference number: 4 (lower is better)
Translates to: ERSHATSGFHSGTSCHRGVSWPS*KRLTEA
Trigger: GGCCTCTGTCAGCCTCTTGCAGCTGGGCCAGGAGAC...GCCCCTATGGCATGAAGTTCCTGAGTGAAAACCTGATGTGGCATGTGACCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR GCA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTCCCAGCCTGCCTCACTaGTCTACGATTTCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: MWPHALTFSISCPPCSQPPSLPH*STISQP
Trigger: GGGCTGAGAAATCGTAGAGCAGTGAGGCAGGCTGGG...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp CCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGACCCCTAGGAGGCTCTaGCTCCTCACTCCCCTAACC +
Preference number: 4 (lower is better)
Translates to: PQLPLWQGFRKVQRALQWTPRRL*LLTPLT
Trigger: GGTTAGGGGAGTGAGGAGGCAGAGCCTCCTAGGGGT...CCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CCA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGCACTGCTCAGCCCCCTaGTTTCTTCGGACAAAGAGG +
Preference number: 4 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRHCSAP*FLRTKR
Trigger: CCTCTTTGTCCGAAGAAACCAGGGGGCTGAGCAGTG...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp CATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCCACTGCTCAGCCCCCTaGTTTCTTCGGACAAAGAGG +
Preference number: 4 (lower is better)
Translates to: HVAPRPNFFHKLSSMLPAHCSAP*FLRTKR
Trigger: CCTCTTTGTCCGAAGAAACCAGGGGGCTGAGCAGTG...GGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCAGGGTTAATCATGGCTaGGGGGTTGCTGATGAGGCT +
Preference number: 4 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACRVNHG*GVADEA
Trigger: AGCCTCATCAGCAACCCCCCAGCCATGATTAACCCT...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCCACAGCTTCTGGCACTaGCTATTGGAGTTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACHSFWH*LLELRH
Trigger: GTGCCTCAACTCCAATAGCCAGTGCCAGAAGCTGTG...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CCA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGGTGACATTCTCTGTGTaGCGAACCAGCCAGGTGACC +
Preference number: 4 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRVTFSV*RTSQVT
Trigger: GGTCACCTGGCTGGTTCGCCACACAGAGAATGTCAC...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp CCCATTCCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTACCATGGTTCTTGAGGTaGGGGTACTCCTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: PIPTPCESDHSFHYGKGLPWFLR*GYSSGH
Trigger: GTGCCCAGAGGAGTACCCCCACCTCAAGAACCATGG...TAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCCCAGGACGCAATTGCTaGTCTGCTTGGCCAACTCTT +
Preference number: 4 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACPGRNC*SAWPTL
Trigger: AAGAGTTGGCCAAGCAGACCAGCAATTGCGTCCTGG...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CCA 90 bp CACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGGTGACTCTCAGCTCCTaGCTTGTCCCTCTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: HSFHYGKGLGRSKGLFSGVTLSS*LVPLGL
Trigger: GAGCCCGAGAGGGACAAGCCAGGAGCTGAGAGTCAC...CCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCACGATCTCCTGGGTCGTaGCATTGTAGCCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQARSPGS*HCSQPA
Trigger: GGCTGGCTGGCTACAATGCCACGACCCAGGAGATCG...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCAGAAGGCCTGCATGGCTaGGGAGAGGATGATGGTCCC +
Preference number: 4 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQAEGLHG*GEDDGP
Trigger: GGGACCATCATCCTCTCCCCAGCCATGCAGGCCTTC...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp ACAGATCTCCAGGACGCAATTGCTGGTCTGCTTGGCCAACTCTTCCAGGAAGGAGGCAGCCACCAAGGCTaGGTCAATGTCACAGCCCAC +
Preference number: 4 (lower is better)
Translates to: TDLQDAIAGLLGQLFQEGGSHQG*VNVTAH
Trigger: GTGGGCTGTGACATTGACCCAGCCTTGGTGGCTGCC...TCCTTCCTGGAAGAGTTGGCCAAGCAGACCAGCAATTGCGTCCTGGAGATCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCAGGGCAGCAGACACCTaGATGATGGCTTTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACRAADT*MMALVK
Trigger: CTTGACCAAAGCCATCATCCAGGTGTCTGCTGCCCT...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CCA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCAAGGGCATCATCCCCTTaGCCAGGCCCTGGACCTTCT +
Preference number: 4 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQARASSP*PGPGPS
Trigger: AGAAGGTCCAGGGCCTGGCCAAGGGGATGATGCCCT...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCCAACTCATTGAGGTGTaGGGGCTGAAGGGGGATTCA +
Preference number: 4 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACQLIEV*GLKGDS
Trigger: TGAATCCCCCTTCAGCCCCCACACCTCAATGAGTTG...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR CAA 72 bp TGGGCAGTGGGAGGAGAAAACCTCCCGAAGTCCCTCTaGGGCCATGGCCCTGAAACTGAGGATAACCCCAAT +
Preference number: 4 (lower is better)
Translates to: WAVGGENLPKSL*GHGPETEDNPN
Trigger: ATTGGGGTTATCCTCAGTTTCAGGGCCATGGCCCAAGAGGGACTTCGGGAGGTTTTCTCCTCCCACTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp CACCACCAGCTTCTTCAGCTCCACAATCTGAGAGGTCACATGCCACATCAGGTTCTGCGGTTCTTCCGGTaGCTCTCAGCTCCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: HHQLLQLHNLRGHMPHQVLRFFR*LSAPGL
Trigger: CAAGCCAGGAGCTGAGAGTCACCGGAAGAACCGCAG...AACCTGATGTGGCATGTGACCTCTCAGATTGTGGAGCTGAAGAAGCTGGTGGTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp CACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGACACAATGGCTCTGTTaGGTCTGGCCTCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: HYGKGLGRSKGLFSGYWQTQWLC*VWPPGG
Trigger: GCCACCTGGAGGCCAGACTCAACAGAGCCATTGTGT...CTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCAACACAATGGCTCTGTTaGGTCTGGCCTCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQATQWLC*VWPPGG
Trigger: GCCACCTGGAGGCCAGACTCAACAGAGCCATTGTGT...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGAGAACTCCTCTGCACTaGAGTTCTGCTCCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRRTPLH*SSAPLL
Trigger: GAGAAGGGGAGCAGAACTTCAGTGCAGAGGAGTTCT...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCTTCAGCTCCACAATCTaGGAGGTCACATGCCACATC +
Preference number: 4 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACFSSTI*EVTCHI
Trigger: GATGTGGCATGTGACCTCTCAGATTGTGGAGCTGAA...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR TCA 90 bp GGTGGAAGGCCCGAGACACCTCCCGATAGGCATTTCGAAGCAGGACATAAGGGACCACCACCAAGCGCATaGGCAGAGAAATGGATTCTC +
Preference number: 4 (lower is better)
Translates to: GGRPETPPDRHFEAGHKGPPPSA*AEKWIL
Trigger: GAGAATCCATTTCTCTGCTCATGCGCTTGGTGGTGG...TCCCTTATGTCCTGCTTCGAAATGCCTATCGGGAGGTGTCTCGGGCCTTCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp CTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGCAGGGTCAGGAAGGATaGCTCCTCCACCACCAAGCG +
Preference number: 4 (lower is better)
Translates to: LPLWQGFRKVQRALQWVLQGQEG*LLHHQA
Trigger: CGCTTGGTGGTGGAGGAGTCATCCTTCCTGACCCTG...CAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp CACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGCACCCCCTGCGAAAGTaGCCACAGCTTCCACTATGG +
Preference number: 4 (lower is better)
Translates to: HYGKGLGRSKGLFSGYWQHPLRK*PQLPLW
Trigger: CCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTG...CTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCACTTCCCCCAACCGCGTaGGTGCATTTCAGCCATGTG +
Preference number: 4 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQALPPTA*VHFSHV
Trigger: CACATGGCTGAAATGCACTCACGCGGTTGGGGGAAG...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGGGGAGGGAGAGTACTTaGCAACTCATTGAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRGREST*QLIEVW
Trigger: CCACACCTCAATGAGTTGTCAAGTACTCTCCCTCCC...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGGGTCACCATGCCCATaGAGCATCTCATGGGCACAA +
Preference number: 4 (lower is better)
Translates to: MWPHALTFSISCPPCSQPGSPCP*SISWAQ
Trigger: TTGTGCCCATGAGATGCTGCATGGGCATGGTGACCC...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp AGGGCGTTGCGGATGACTCTGGAAGCATCTGCACCCAAAAACTGGGCCAGTGACAAACTGGGGTCACCATaGCCATGCAGCATCTCATGG +
Preference number: 4 (lower is better)
Translates to: RALRMTLEASAPKNWASDKLGSP*PCSISW
Trigger: CCATGAGATGCTGCATGGGCATGGTGACCCCAGTTT...GTCACTGGCCCAGTTTTTGGGTGCAGATGCTTCCAGAGTCATCCGCAACGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR GCA 90 bp CCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGTTAGAAGTTGGGCACTaGGCCACTGCTCAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: PQLPLWQGFRKVQRALQWLEVGH*ATAQPP
Trigger: AGGGGGCTGAGCAGTGGCGCAGTGCCCAACTTCTAA...CCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR GCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCGCTCTCCTTTATGTCTaGCACTCTCTTGCCATACCC +
Preference number: 4 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACALLYV*HSLAIP
Trigger: GGGTATGGCAAGAGAGTGGCAGACATAAAGGAGAGC...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTCTCCAGCTCCTTCACTaGCATCCGCAGAAATTGCCG +
Preference number: 4 (lower is better)
Translates to: MWPHALTFSISCPPCSQPLQLLH*HPQKLP
Trigger: CGGCAATTTCTGCGGATGGCAGTGAAGGAGCTGGAG...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGAAGTCAGGGTTCTCATaGAGGTGCAGAGGGGCCTTA +
Preference number: 4 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRKSGFS*RCRGAL
Trigger: TAAGGCCCCTCTGCACCTGCATGAGAACCCTGACTT...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR GCA 90 bp CATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCGTATGCTTTGACTCCTaGCAACAGCTCAGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: HVAPRPNFFHKLSSMLPAVCFDS*QQLRRP
Trigger: CGGCCTTCTGAGCTGTTGGCAGGAGTCAAAGCATAC...GGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp CTCTTCCCCCAACCGCGTGAGTGCATTTCAGCCATGTGCCAGCTTCTTCTCAAAAGTGGTTGTGTCTGCTaGAGGAGGGCGTTGCGGATG +
Preference number: 4 (lower is better)
Translates to: LFPQPRECISAMCQLLLKSGCVC*RRALRM
Trigger: CATCCGCAACGCCCTCCTGCAGCAGACACAACCACT...TTTGAGAAGAAGCTGGCACATGGCTGAAATGCACTCACGCGGTTGGGGGAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCAAGTGGTTGTGTCTGCTaGAGGAGGGCGTTGCGGATG +
Preference number: 4 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQASGCVC*RRALRM
Trigger: CATCCGCAACGCCCTCCTGCAGCAGACACAACCACT...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR GCA 90 bp ACAGATCTCCAGGACGCAATTGCTGGTCTGCTTGGCCAACTCTTCCAGGAAGGAAGTGGTTGTGTCTGCTaGAGGAGGGCGTTGCGGATG +
Preference number: 4 (lower is better)
Translates to: TDLQDAIAGLLGQLFQEGSGCVC*RRALRM
Trigger: CATCCGCAACGCCCTCCTGCAGCAGACACAACCACT...TCCTTCCTGGAAGAGTTGGCCAAGCAGACCAGCAATTGCGTCCTGGAGATCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR GCA 90 bp CACCACCAGCTTCTTCAGCTCCACAATCTGAGAGGTCACATGCCACATCAGGTTTCCAGTGGTTGTGTCTaGTGCAGGAGGGCGTTGCGG +
Preference number: 4 (lower is better)
Translates to: HHQLLQLHNLRGHMPHQVSSGCV*CRRALR
Trigger: CCGCAACGCCCTCCTGCAGCAGACACAACCACTGGA...AACCTGATGTGGCATGTGACCTCTCAGATTGTGGAGCTGAAGAAGCTGGTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR GCA 90 bp CCCATTCCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTATCTGCACTGAAGTTCTaGTCCCCTTCTCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PIPTPCESDHSFHYGKGLSALKF*SPSLGR
Trigger: CCTGCCCAGAGAAGGGGAGCAGAACTTCAGTGCAGA...TAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp CCCATTCCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGTCACAGCCCACACCTaGAGCAGATGCCAGCTCAAA +
Preference number: 4 (lower is better)
Translates to: PIPTPCESDHSFHYGKGLVTAHT*SRCQLK
Trigger: TTTGAGCTGGCATCTGCTGCAGGTGTGGGCTGTGAC...TAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp CACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGCCCATTCCCACCCCCTaGGAAAGTGACCACAGCTTC +
Preference number: 4 (lower is better)
Translates to: HYGKGLGRSKGLFSGYWQPIPTP*ESDHSF
Trigger: GAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG...CTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCACCCAGCCTGCCTCACTaGTCTACGATTTCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQAPSLPH*STISQP
Trigger: GGGCTGAGAAATCGTAGAGCAGTGAGGCAGGCTGGG...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp CCCATTCCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAATAAGCTGTCCTCCATaGTCCCAGCCTGCCTCACTG +
Preference number: 4 (lower is better)
Translates to: PIPTPCESDHSFHYGKGLISCPP*SQPASL
Trigger: CAGTGAGGCAGGCTGGGAGCATGGAGGACAGCTTAT...TAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp CTCTTCCCCCAACCGCGTGAGTGCATTTCAGCCATGTGCCAGCTTCTTCTCAAACACAGTGTCACATCCTaGTCTCCCAAGACCCCCTGC +
Preference number: 4 (lower is better)
Translates to: LFPQPRECISAMCQLLLKHSVTS*SPKTPC
Trigger: GCAGGGGGTCTTGGGAGAGCAGGATGTGACACTGTG...TTTGAGAAGAAGCTGGCACATGGCTGAAATGCACTCACGCGGTTGGGGGAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CCA 90 bp CACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGCCAGACGGGCAAAACTaGGGTCACCATGCCCATGCA +
Preference number: 4 (lower is better)
Translates to: HYGKGLGRSKGLFSGYWQPDGQN*GHHAHA
Trigger: TGCATGGGCATGGTGACCCCAGTTTTGCCCGTCTGG...CTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp CATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCATGAGGCTTAGAAGTTaGGCACTGCGCCACTGCTCA +
Preference number: 4 (lower is better)
Translates to: HVAPRPNFFHKLSSMLPAMRLRS*ALRHCS
Trigger: TGAGCAGTGGCGCAGTGCCCAACTTCTAAGCCTCAT...GGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CCA 90 bp TGTGTCTGCTGCAGGAGGGCGTTGCGGATGACTCTGGAAGCATCTGCACCCAAAATGAGGCTTAGAAGTTaGGCACTGCGCCACTGCTCA +
Preference number: 4 (lower is better)
Translates to: CVCCRRALRMTLEASAPKMRLRS*ALRHCS
Trigger: TGAGCAGTGGCGCAGTGCCCAACTTCTAAGCCTCAT...TTTGGGTGCAGATGCTTCCAGAGTCATCCGCAACGCCCTCCTGCAGCAGACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CCA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGAGGGTTAATCATGGCTaGGGGGTTGCTGATGAGGCT +
Preference number: 4 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRRVNHG*GVADEA
Trigger: AGCCTCATCAGCAACCCCCCAGCCATGATTAACCCT...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCAGCTTCCACAGCTTCTaGCACTGGCTATTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACSFHSF*HWLLEL
Trigger: CAACTCCAATAGCCAGTGCCAGAAGCTGTGGAAGCT...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CCA 90 bp ACAGATCTCCAGGACGCAATTGCTGGTCTGCTTGGCCAACTCTTCCAGGAAGGACCATGGTTCTTGAGGTaGGGGTACTCCTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: TDLQDAIAGLLGQLFQEGPWFLR*GYSSGH
Trigger: GTGCCCAGAGGAGTACCCCCACCTCAAGAACCATGG...TCCTTCCTGGAAGAGTTGGCCAAGCAGACCAGCAATTGCGTCCTGGAGATCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CCA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCATCCCGAAGTCCCTCTTaGGCCATGGCCCTGAAACTG +
Preference number: 4 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQASRSPS*AMALKL
Trigger: CAGTTTCAGGGCCATGGCCCAAGAGGGACTTCGGGA...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp CTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGGCAGCCACCAAGGCTaGGTCAATGTCACAGCCCAC +
Preference number: 4 (lower is better)
Translates to: LPLWQGFRKVQRALQWVLGSHQG*VNVTAH
Trigger: GTGGGCTGTGACATTGACCCAGCCTTGGTGGCTGCC...CAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp TGTGTCTGCTGCAGGAGGGCGTTGCGGATGACTCTGGAAGCATCTGCACCCAAAGTCAGTGGCAAGGAGTaGGAGGGAAACTGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: CVCCRRALRMTLEASAPKVSGKE*EGNCQK
Trigger: TTTCTGGCAGTTTCCCTCCCACTCCTTGCCACTGAC...TTTGGGTGCAGATGCTTCCAGAGTCATCCGCAACGCCCTCCTGCAGCAGACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CCA 90 bp CACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGAGCTTGTCAGTCTCCTaGCCCAGCTGCAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: HSFHYGKGLGRSKGLFSGSLSVS*PSCKRL
Trigger: CAGCCTCTTGCAGCTGGGCCAGGAGACTGACAAGCT...CCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp CATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTTAGCACACATCCCTTaGCTTTTCCCCAGACCCAGC +
Preference number: 4 (lower is better)
Translates to: HVAPRPNFFHKLSSMLPALAHIP*LFPRPS
Trigger: GCTGGGTCTGGGGAAAAGCCAAGGGATGTGTGCTAA...GGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR CAA 72 bp CCCACCCTCTGTCCATCTACCTTTAGCACACATCCCTaGGCTTTTCCCCAGACCCAGCCAAGAAATGGCTGC +
Preference number: 4 (lower is better)
Translates to: PTLCPSTFSTHP*AFPQTQPRNGC
Trigger: GCAGCCATTTCTTGGCTGGGTCTGGGGAAAAGCCAAGGGATGTGTGCTAAAGGTAGATGGACAGAGGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR CAA 72 bp AGGTTTCGCTGCTCAGCACAGATCTCCAGGACGCAATaGCTGGTCTGCTTGGCCAACTCTTCCAGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: RFRCSAQISRTQ*LVCLANSSRKE
Trigger: CTCCTTCCTGGAAGAGTTGGCCAAGCAGACCAGCAATTGCGTCCTGGAGATCTGTGCTGAGCAGCGAAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR CAA 72 bp CAGGAATCCAGTGGTTGTGTCTGCTGCAGGAGGGCGTaGCGGATGACTCTGGAAGCATCTGCACCCAAAAAC +
Preference number: 4 (lower is better)
Translates to: QESSGCVCCRRA*RMTLEASAPKN
Trigger: GTTTTTGGGTGCAGATGCTTCCAGAGTCATCCGCAACGCCCTCCTGCAGCAGACACAACCACTGGATTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR CAA 72 bp TGTGGTGATTGTCTGTTCCCCACAGGAATCCAGTGGTaGTGTCTGCTGCAGGAGGGCGTTGCGGATGACTCT +
Preference number: 4 (lower is better)
Translates to: CGDCLFPTGIQW*CLLQEGVADDS
Trigger: AGAGTCATCCGCAACGCCCTCCTGCAGCAGACACAACCACTGGATTCCTGTGGGGAACAGACAATCACCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCGAGTTGAGGCACCCATaGCAAAGAAGAAACCCAATG +
Preference number: 4 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACELRHP*QRRNPM
Trigger: CATTGGGTTTCTTCTTTGTCATGGGTGCCTCAACTC...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR TCA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCAGAAGACCATGGTTCTTaGGGTGGGGGTACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQAEDHGS*GGGTPL
Trigger: CAGAGGAGTACCCCCACCTCAAGAACCATGGTCTTC...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp CCCATTCCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAAGAACTCCTCTGCACTaGAGTTCTGCTCCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: PIPTPCESDHSFHYGKGLRTPLH*SSAPLL
Trigger: GAGAAGGGGAGCAGAACTTCAGTGCAGAGGAGTTCT...TAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR TCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCTGTCTGTGTCTGGAGTaGCAAACTCCTTCAAGCACT +
Preference number: 4 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACCLCLE*QTPSST
Trigger: AGTGCTTGAAGGAGTTTGTCACTCCAGACACAGACA...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR TCA 90 bp CATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCCAGCAGACACCTGGATaGTGGCTTTGGTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: HVAPRPNFFHKLSSMLPAQQTPG*WLWSSN
Trigger: ATTGCTTGACCAAAGCCATCATCCAGGTGTCTGCTG...GGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR TCA 90 bp CACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGGGCAGTGAACATCTCTaGAGGGCACTTCCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: HSFHYGKGLGRSKGLFSGGSEHL*RALPPC
Trigger: GCAAGGAGGAAGTGCCCTTCAGAGATGTTCACTGCC...CCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTTTGACGGAGACTAACTaGCCCTCTGCTCTGGGTTGT +
Preference number: 4 (lower is better)
Translates to: MWPHALTFSISCPPCSQPLTETN*PSALGC
Trigger: ACAACCCAGAGCAGAGGGTCAGTTAGTCTCCGTCAA...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp CATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCGGAAGGAGGATTTGCTaGTGCACGAAGCAGGATTCT +
Preference number: 4 (lower is better)
Translates to: HVAPRPNFFHKLSSMLPAGRRIC*CTKQDS
Trigger: AGAATCCTGCTTCGTGCATCAGCAAATCCTCCTTCC...GGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp ATAAGGGACTTCCCACCCTCTGTCCATCTACCTTTAGCACACATCCCTTGGCTTGCTGCCTCAGCCTCCTaGGTAGTGGGACTACAGGCA +
Preference number: 4 (lower is better)
Translates to: IRDFPPSVHLPLAHIPWLAASAS*VVGLQA
Trigger: TGCCTGTAGTCCCACTACTCAGGAGGCTGAGGCAGC...AAGCCAAGGGATGTGTGCTAAAGGTAGATGGACAGAGGGTGGGAAGTCCCTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp CACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGGTTCCTTCTGCACTTTaGAGCTGGCCCACCTGCCAA +
Preference number: 4 (lower is better)
Translates to: HSFHYGKGLGRSKGLFSGVPSAL*SWPTCQ
Trigger: TTGGCAGGTGGGCCAGCTTCAAAGTGCAGAAGGAAC...CCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp CACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGTGGTCTCAAACTCCTaGGTTCAAGCGATCCGCCTG +
Preference number: 4 (lower is better)
Translates to: HYGKGLGRSKGLFSGYWQVVSNS*VQAIRL
Trigger: CAGGCGGATCGCTTGAACTCAGGAGTTTGAGACCAC...CTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGGGCGAAGAAGCGGATaGACTGTCACAGCTAAGACT +
Preference number: 4 (lower is better)
Translates to: MWPHALTFSISCPPCSQPGRRSG*TVTAKT
Trigger: AGTCTTAGCTGTGACAGTTCATCCGCTTCTTCGCCC...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGCTCTGTTCTAAATACTaGGTGGAGGCTCCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRLCSKY*VEAPPL
Trigger: GAGAGGAGGAGCCTCCACTCAGTATTTAGAACAGAG...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp CACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGGGGTCACCATGCCCATaGAGCATCTCATGGGCACAA +
Preference number: 4 (lower is better)
Translates to: HSFHYGKGLGRSKGLFSGGSPCP*SISWAQ
Trigger: TTGTGCCCATGAGATGCTGCATGGGCATGGTGACCC...CCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR GCA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTAAACTGGGGTCACCATaGCCATGCAGCATCTCATGG +
Preference number: 4 (lower is better)
Translates to: MWPHALTFSISCPPCSQPKLGSP*PCSISW
Trigger: CCATGAGATGCTGCATGGGCATGGTGACCCCAGTTT...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGGTGACTTTGTGCACCTaGAGCACATCCTCACGGATA +
Preference number: 4 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRVTLCT*STSSRI
Trigger: TATCCGTGAGGATGTGCTGCAGGTGCACAAAGTCAC...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR GCA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTTCCTCGGTGACTTTGTaGACCTGCAGCACATCCTCA +
Preference number: 4 (lower is better)
Translates to: MWPHALTFSISCPPCSQPSSVTL*TCSTSS
Trigger: TGAGGATGTGCTGCAGGTGCACAAAGTCACCGAGGA...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCTGTCTGCCACTCTCTTaGCATACCCTTTCAAACTGC +
Preference number: 4 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACCLPLS*HTLSNC
Trigger: GCAGTTTGAAAGGGTATGGCAAGAGAGTGGCAGACA...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGGCTCTCCTTTATGTCTaGCACTCTCTTGCCATACCC +
Preference number: 4 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRALLYV*HSLAIP
Trigger: GGGTATGGCAAGAGAGTGGCAGACATAAAGGAGAGC...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR GCA 90 bp CACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGCTCCAGCTCCTTCACTaGCATCCGCAGAAATTGCCG +
Preference number: 4 (lower is better)
Translates to: HSFHYGKGLGRSKGLFSGLQLLH*HPQKLP
Trigger: CGGCAATTTCTGCGGATGGCAGTGAAGGAGCTGGAG...CCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR GCA 90 bp TGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCATTCTCCAGCTCCTTCACTaGCATCCGCAGAAATTGCCG +
Preference number: 4 (lower is better)
Translates to: WQGFRKVQRALQWVLAGILQLLH*HPQKLP
Trigger: CGGCAATTTCTGCGGATGGCAGTGAAGGAGCTGGAG...AATGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR GCA 90 bp GGTGGAAGGCCCGAGACACCTCCCGATAGGCATTTCGAAGCAGGACATAAGGGAGGCACATCTCATGAGTaGAGTGGACAAAGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: GGRPETPPDRHFEAGHKGGTSHE*SGQSEH
Trigger: GTGCTCACTTTGTCCACTGCACTCATGAGATGTGCC...TCCCTTATGTCCTGCTTCGAAATGCCTATCGGGAGGTGTCTCGGGCCTTCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR GCA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTACGCAATTGCTGGTCTaGTTGGCCAACTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: MWPHALTFSISCPPCSQPTQLLV*LANSSR
Trigger: CCTGGAAGAGTTGGCCAAGCAGACCAGCAATTGCGT...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp CCCATTCCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTATCTCCAGGACGCAATTaGTGGTCTGCTTGGCCAACT +
Preference number: 4 (lower is better)
Translates to: PIPTPCESDHSFHYGKGLSPGRN*WSAWPT
Trigger: AGTTGGCCAAGCAGACCAGCAATTGCGTCCTGGAGA...TAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp AGGACGCAATTGCTGGTCTGCTTGGCCAACTCTTCCAGGAAGGAGTTGCAGTGGTCTCCAGGACGCAATTaGTGGTCTGCTTGGCCAACT +
Preference number: 4 (lower is better)
Translates to: RTQLLVCLANSSRKELQWSPGRN*WSAWPT
Trigger: AGTTGGCCAAGCAGACCAGCAATTGCGTCCTGGAGA...CCACTGCAACTCCTTCCTGGAAGAGTTGGCCAAGCAGACCAGCAATTGCGTCCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR GCA 90 bp ATAAGGGACTTCCCACCCTCTGTCCATCTACCTTTAGCACACATCCCTTGGCTTAGGCTGACGAAGGCCTaGATGGCTGGGGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: IRDFPPSVHLPLAHIPWLRLTKA*MAGERM
Trigger: CATCCTCTCCCCAGCCATGCAGGCCTTCGTCAGCCT...AAGCCAAGGGATGTGTGCTAAAGGTAGATGGACAGAGGGTGGGAAGTCCCTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp CCCATTCCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTACACTCAGGAACTTCATaGCATAGGGGCCCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: PIPTPCESDHSFHYGKGLHSGTS*HRGPGV
Trigger: AACTCCTGGGCCCCTATGGCATGAAGTTCCTGAGTG...TAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp GGTGGAAGGCCCGAGACACCTCCCGATAGGCATTTCGAAGCAGGACATAAGGGAGAGTGGGAGGGAAACTaGCAGAAAGATCAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: GGRPETPPDRHFEAGHKGEWEGN*QKDQEQ
Trigger: CTGCTCTTGATCTTTCTGGCAGTTTCCCTCCCACTC...TCCCTTATGTCCTGCTTCGAAATGCCTATCGGGAGGTGTCTCGGGCCTTCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR GCA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGAAAGAGGGGCTCCTTTaGTGCTACTCTGCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRKEGLL*CYSAVG
Trigger: TCCTACTGCAGAGTAGCAGCAAAGGAGCCCCTCTTT...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp CACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGAGGGCACTTCCTCCTTaGCCCAGTAGGAAACGCAGT +
Preference number: 4 (lower is better)
Translates to: HSFHYGKGLGRSKGLFSGRALPP*PSRKRS
Trigger: ACTGCGTTTCCTACTGGGGCAAGGAGGAAGTGCCCT...CCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp CCCATTCCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTATACCCTCCATCCCCCTaGAGCAACTTGTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: PIPTPCESDHSFHYGKGLYPPSP*SNLSCC
Trigger: ACAGCAAGACAAGTTGCTGCAGGGGGATGGAGGGTA...TAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp CCCATTCCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTACTATATTGGCCAGGCTaGTCTCAAACCCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: PIPTPCESDHSFHYGKGLLYWPG*SQTPDL
Trigger: GAGGTCAGGGGTTTGAGAGCAGCCTGGCCAATATAG...TAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp CATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCGGGATCAAGTTATTCTaGTGCCTCAGCCTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: HVAPRPNFFHKLSSMLPAGIKLF*CLSLLS
Trigger: ACTCAGGAGGCTGAGGCAGCAGAATAACTTGATCCC...GGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCTGCAAAGCAAAGTaGTACAGGGCATCATCCCCT +
Preference number: 4 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRSCKAK*YRASSP
Trigger: AGGGGATGATGCCCTGTAGCACTTTGCTTTGCAGGA...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp GTTCGCCATGTTGACCAGGCTGGTCTTAACCTCCTTAGCTCAAGAGATCCACTGCCCCAACCGCGTGAGTaGATTTCAGCCATGTGCCAG +
Preference number: 4 (lower is better)
Translates to: VRHVDQAGLNLLSSRDPLPQPRE*ISAMCQ
Trigger: CTGGCACATGGCTGAAATGCACTCACGCGGTTGGGG...CAGTGGATCTCTTGAGCTAAGGAGGTTAAGACCAGCCTGGTCAACATGGCGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTGCCTCCTACGGGAATaGTATTTAAAGGGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRCLLRE*YLKGQP
Trigger: AGGCTGCCCCTTTAAATAGCATTCCCGTAGGAGGCA...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CCA 90 bp AGGACGCAATTGCTGGTCTGCTTGGCCAACTCTTCCAGGAAGGAGTTGCAGTGGAGGGTTAATCATGGCTaGGGGGTTGCTGATGAGGCT +
Preference number: 4 (lower is better)
Translates to: RTQLLVCLANSSRKELQWRVNHG*GVADEA
Trigger: AGCCTCATCAGCAACCCCCCAGCCATGATTAACCCT...CCACTGCAACTCCTTCCTGGAAGAGTTGGCCAAGCAGACCAGCAATTGCGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CCA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGAGCTTCCACAGCTTCTaGCACTGGCTATTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRSFHSF*HWLLEL
Trigger: CAACTCCAATAGCCAGTGCCAGAAGCTGTGGAAGCT...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp AGGGCGTTGCGGATGACTCTGGAAGCATCTGCACCCAAAAACTGGGCCAGTGACTCAGGGGGAAAGCAATaGCATAACGCAACATGGCAG +
Preference number: 4 (lower is better)
Translates to: RALRMTLEASAPKNWASDSGGKQ*HNATWQ
Trigger: CTGCCATGTTGCGTTATGCCATTGCTTTCCCCCTGA...GTCACTGGCCCAGTTTTTGGGTGCAGATGCTTCCAGAGTCATCCGCAACGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CCA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCAGTGGGGGTACTCCTCTaGGCACATCTCATGAGTGCA +
Preference number: 4 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQAVGVLL*AHLMSA
Trigger: TGCACTCATGAGATGTGCCCAGAGGAGTACCCCCAC...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp CCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTGGGGGTACTCCTCTaGGCACATCTCATGAGTGCA +
Preference number: 4 (lower is better)
Translates to: PQLPLWQGFRKVQRALQWVGVLL*AHLMSA
Trigger: TGCACTCATGAGATGTGCCCAGAGGAGTACCCCCAC...CCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGAATTGCTGGTCTGCTTaGCCAACTCTTCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRNCWSA*PTLPGR
Trigger: CCTTCCTGGAAGAGTTGGCCAAGCAGACCAGCAATT...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp AGGACGCAATTGCTGGTCTGCTTGGCCAACTCTTCCAGGAAGGAGTTGCAGTGGCCAGGACGCAATTGCTaGTCTGCTTGGCCAACTCTT +
Preference number: 4 (lower is better)
Translates to: RTQLLVCLANSSRKELQWPGRNC*SAWPTL
Trigger: AAGAGTTGGCCAAGCAGACCAGCAATTGCGTCCTGG...CCACTGCAACTCCTTCCTGGAAGAGTTGGCCAAGCAGACCAGCAATTGCGTCCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CCA 90 bp CACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGAGTCTGGCCTCCAGGTaGCTGCTGAGGTACTCAGAA +
Preference number: 4 (lower is better)
Translates to: HYGKGLGRSKGLFSGYWQSLASR*LLRYSE
Trigger: TTCTGAGTACCTCAGCAGCCACCTGGAGGCCAGACT...CTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp CCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGCCCACAGGAATCCAGTaGTTGTGTCTGCTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: PQLPLWQGFRKVQRALQWPTGIQ*LCLLQE
Trigger: CTCCTGCAGCAGACACAACCACTGGATTCCTGTGGG...CCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp CACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGCCCACAGGAATCCAGTaGTTGTGTCTGCTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: HSFHYGKGLGRSKGLFSGPTGIQ*LCLLQE
Trigger: CTCCTGCAGCAGACACAACCACTGGATTCCTGTGGG...CCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp ATAAGGGACTTCCCACCCTCTGTCCATCTACCTTTAGCACACATCCCTTGGCTTGAAGGCCTGCATGGCTaGGGAGAGGATGATGGTCCC +
Preference number: 4 (lower is better)
Translates to: IRDFPPSVHLPLAHIPWLEGLHG*GEDDGP
Trigger: GGGACCATCATCCTCTCCCCAGCCATGCAGGCCTTC...AAGCCAAGGGATGTGTGCTAAAGGTAGATGGACAGAGGGTGGGAAGTCCCTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CCA 90 bp CTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGAGCTTGTCAGTCTCCTaGCCCAGCTGCAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LPLWQGFRKVQRALQWVLSLSVS*PSCKRL
Trigger: CAGCCTCTTGCAGCTGGGCCAGGAGACTGACAAGCT...CAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp CATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCCCACAGCTTCCACTATaGCAAGGGTTTAGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: HVAPRPNFFHKLSSMLPAPQLPL*QGFRKV
Trigger: GACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG...GGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CCA 90 bp CTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGGCCCACCTGCCAACTaGATTGAACACCATGGCAGG +
Preference number: 4 (lower is better)
Translates to: LPLWQGFRKVQRALQWVLGPPAN*IEHHGR
Trigger: CCTGCCATGGTGTTCAATCCAGTTGGCAGGTGGGCC...CAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CCA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTAGCCTTGTCCCTAGCTaGGGGACACAGATATACCCT +
Preference number: 4 (lower is better)
Translates to: MWPHALTFSISCPPCSQPSLVPS*GTQIYP
Trigger: AGGGTATATCTGTGTCCCCCAGCTAGGGACAAGGCT...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR CAA 72 bp TTCTGCACTTTGAAGCTGGCCCACCTGCCAACTGGATaGAACACCATGGCAGGGGAGGCAGTGTTTCTACTG +
Preference number: 4 (lower is better)
Translates to: FCTLKLAHLPTG*NTMAGEAVFLL
Trigger: CAGTAGAAACACTGCCTCCCCTGCCATGGTGTTCAATCCAGTTGGCAGGTGGGCCAGCTTCAAAGTGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp CTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGAGACATGATGGCCACTaGGAGAGGAGCACCAGACAG +
Preference number: 4 (lower is better)
Translates to: LPLWQGFRKVQRALQWVLRHDGH*ERSTRQ
Trigger: CTGTCTGGTGCTCCTCTCTCAGTGGCCATCATGTCT...CAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000548221.5
CDS-3UTR TCA 90 bp CTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGCGGATGAGAACCCCCTaGCCGCGATCATTCAGGATA +
Preference number: 4 (lower is better)
Translates to: LPLWQGFRKVQRALQWVLRMRTP*PRSFRI
Trigger: TATCCTGAATGATCGCGGTCAGGGGGTTCTCATCCG...CAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000548221.5
CDS-3UTR TCA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTTGTTATACATACGGATaGGAACCCCCTGACCGCGAT +
Preference number: 4 (lower is better)
Translates to: MWPHALTFSISCPPCSQPCYTYG*EPPDRD
Trigger: ATCGCGGTCAGGGGGTTCTCATCCGTATGTATAACA...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp GCCGTACGATCTCCTGGGTCGTGGCATTGTAGCCAGCCAGCCACACAATGGCTCAATTGTACATGCCAATaGGTATCCGCCGATCTTCAA +
Preference number: 4 (lower is better)
Translates to: AVRSPGSWHCSQPATQWLNCTCQ*VSADLQ
Trigger: TTGAAGATCGGCGGATACTCATTGGCATGTACAATT...GAGCCATTGTGTGGCTGGCTGGCTACAATGCCACGACCCAGGAGATCGTACGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCATACTCCAAGACCATCTaGCCCAGACGGGCAAAACTG +
Preference number: 4 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQAYSKTI*PRRAKL
Trigger: CAGTTTTGCCCGTCTGGGTCAGATGGTCTTGGAGTA...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp CACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGTACTCCAAGACCATCTaGCCCAGACGGGCAAAACTG +
Preference number: 4 (lower is better)
Translates to: HYGKGLGRSKGLFSGYWQYSKTI*PRRAKL
Trigger: CAGTTTTGCCCGTCTGGGTCAGATGGTCTTGGAGTA...CTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp TGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCATTTACTCCAAGACCATCTaGCCCAGACGGGCAAAACTG +
Preference number: 4 (lower is better)
Translates to: WQGFRKVQRALQWVLAGIYSKTI*PRRAKL
Trigger: CAGTTTTGCCCGTCTGGGTCAGATGGTCTTGGAGTA...AATGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCACTCACAGCCTTTGTGTaGGGCCCAAACTCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQALTAFV*GPNSSV
Trigger: GACAGAAGAGTTTGGGCCTCACACAAAGGCTGTGAG...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp GAGTTCTGCCAAGGCCCGCATCTCAGAGATGTCAGAGAACTCCTCTGCACTGAACTCACAGCCTTTGTGTaGGGCCCAAACTCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: EFCQGPHLRDVRELLCTELTAFV*GPNSSV
Trigger: GACAGAAGAGTTTGGGCCTCACACAAAGGCTGTGAG...TTCAGTGCAGAGGAGTTCTCTGACATCTCTGAGATGCGGGCCTTGGCAGAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCATTGCTGTATCACTTTaGTGTGTCTTCGGACCAGAG +
Preference number: 4 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACIAVSL*CVFGPE
Trigger: CTCTGGTCCGAAGACACATCAAAGTGATACAGCAAT...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR TCA 90 bp CCCATTCCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAAAGGAGTTGCAGTGGTaGAGACCATGGTTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: PIPTPCESDHSFHYGKGLKELQW*RPWFLR
Trigger: CCTCAAGAACCATGGTCTTCACCACTGCAACTCCTT...TAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR TCA 90 bp CTCTTCCCCCAACCGCGTGAGTGCATTTCAGCCATGTGCCAGCTTCTTCTCAAAGCTTGTCCATGTTGGTaGCAATGCTGCGGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LFPQPRECISAMCQLLLKACPCW*QCCGSS
Trigger: GGAAGAACCGCAGCATTGTCACCAACATGGACAAGC...TTTGAGAAGAAGCTGGCACATGGCTGAAATGCACTCACGCGGTTGGGGGAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp GAGGCAGTGTTTCTACTGTCCAAACAAAAGGGGGCACCTATGCAAGTATCTTGCGGAGGGCGTTGCGGATaGCTCTGGAAGCATCTGCAC +
Preference number: 4 (lower is better)
Translates to: EAVFLLSKQKGAPMQVSCGGRCG*LWKHLH
Trigger: GTGCAGATGCTTCCAGAGTCATCCGCAACGCCCTCC...GCAAGATACTTGCATAGGTGCCCCCTTTTGTTTGGACAGTAGAAACACTGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp CCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGCCACCACCAAGCGCATaGGCAGAGAAATGGATTCTC +
Preference number: 4 (lower is better)
Translates to: PQLPLWQGFRKVQRALQWPPPSA*AEKWIL
Trigger: GAGAATCCATTTCTCTGCTCATGCGCTTGGTGGTGG...CCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCACCACCACCAAGCGCATaGGCAGAGAAATGGATTCTC +
Preference number: 4 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQAPPPSA*AEKWIL
Trigger: GAGAATCCATTTCTCTGCTCATGCGCTTGGTGGTGG...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp GAGGCAGTGTTTCTACTGTCCAAACAAAAGGGGGCACCTATGCAAGTATCTTGCCAGGGTCAGGAAGGATaGCTCCTCCACCACCAAGCG +
Preference number: 4 (lower is better)
Translates to: EAVFLLSKQKGAPMQVSCQGQEG*LLHHQA
Trigger: CGCTTGGTGGTGGAGGAGTCATCCTTCCTGACCCTG...GCAAGATACTTGCATAGGTGCCCCCTTTTGTTTGGACAGTAGAAACACTGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCATACTTGACAACTCATTaGGGTGTGGGGGCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQAYLTTH*GVGAEG
Trigger: CCCTTCAGCCCCCACACCTCAATGAGTTGTCAAGTA...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp CACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGAAACTGGGGTCACCATaGCCATGCAGCATCTCATGG +
Preference number: 4 (lower is better)
Translates to: HYGKGLGRSKGLFSGYWQKLGSP*PCSISW
Trigger: CCATGAGATGCTGCATGGGCATGGTGACCCCAGTTT...CTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR GCA 90 bp CATGAGTGCAGTGGACAAAGTGAGCACAAATCAGGGGGAAAGCAATGGCATAACTGGGCACTGCGCCACTaGTCAGCCCCCTGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: HECSGQSEHKSGGKQWHNWALRH*SAPWFL
Trigger: AAGAAACCAGGGGGCTGAGCAGTGGCGCAGTGCCCA...GTTATGCCATTGCTTTCCCCCTGATTTGTGCTCACTTTGTCCACTGCACTCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR GCA 90 bp TGTGTCTGCTGCAGGAGGGCGTTGCGGATGACTCTGGAAGCATCTGCACCCAAATGTCTGCCACTCTCTTaGCATACCCTTTCAAACTGC +
Preference number: 4 (lower is better)
Translates to: CVCCRRALRMTLEASAPKCLPLS*HTLSNC
Trigger: GCAGTTTGAAAGGGTATGGCAAGAGAGTGGCAGACA...TTTGGGTGCAGATGCTTCCAGAGTCATCCGCAACGCCCTCCTGCAGCAGACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR GCA 90 bp CACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGAAGTCAGGGTTCTCATaGAGGTGCAGAGGGGCCTTA +
Preference number: 4 (lower is better)
Translates to: HYGKGLGRSKGLFSGYWQKSGFS*RCRGAL
Trigger: TAAGGCCCCTCTGCACCTGCATGAGAACCCTGACTT...CTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR GCA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCAACGCAATTGCTGGTCTaGTTGGCCAACTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQATQLLV*LANSSR
Trigger: CCTGGAAGAGTTGGCCAAGCAGACCAGCAATTGCGT...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR GCA 90 bp GAGTTCTGCCAAGGCCCGCATCTCAGAGATGTCAGAGAACTCCTCTGCACTGAAACGCAATTGCTGGTCTaGTTGGCCAACTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: EFCQGPHLRDVRELLCTETQLLV*LANSSR
Trigger: CCTGGAAGAGTTGGCCAAGCAGACCAGCAATTGCGT...TTCAGTGCAGAGGAGTTCTCTGACATCTCTGAGATGCGGGCCTTGGCAGAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR GCA 90 bp CTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGTCGCTCAGGTTTCGCTaGTCAGCACAGATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LPLWQGFRKVQRALQWVLSLRFR*SAQISR
Trigger: CCTGGAGATCTGTGCTGAGCAGCGAAACCTGAGCGA...CAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR GCA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCAGACTCTGGAAGCATCTaGACCCAAAAACTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQADSGSI*TQKLGQ
Trigger: CTGGCCCAGTTTTTGGGTGCAGATGCTTCCAGAGTC...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR GCA 90 bp CCCATTCCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGATGGTCCCACTGCTTaGCTGTCTAAGCAGACTTTC +
Preference number: 4 (lower is better)
Translates to: PIPTPCESDHSFHYGKGLDGPTA*LSKQTF
Trigger: GAAAGTCTGCTTAGACAGGCAAGCAGTGGGACCATC...TAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp CACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGGTCAGAGAACTCCTCTaGACTGAAGTTCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: HSFHYGKGLGRSKGLFSGVRELL*TEVLLP
Trigger: GGGGAGCAGAACTTCAGTGCAGAGGAGTTCTCTGAC...CCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR GCA 90 bp CATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCCCTTTGCTGCTACTCTaGAGTAGGAGCAGGTTGAAT +
Preference number: 4 (lower is better)
Translates to: HVAPRPNFFHKLSSMLPAPLLLL*SRSRLN
Trigger: ATTCAACCTGCTCCTACTGCAGAGTAGCAGCAAAGG...GGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp CCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGACACCCAGTTCCTTCTaGACTTTGAAGCTGGCCCAC +
Preference number: 4 (lower is better)
Translates to: PQLPLWQGFRKVQRALQWTPSSF*TLKLAH
Trigger: GTGGGCCAGCTTCAAAGTGCAGAAGGAACTGGGTGT...CCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp CTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGTTCAAGCGATCCGCCTaGCTCCCAAAGTGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: LPLWQGFRKVQRALQWVLFKRSA*LPKCWD
Trigger: ATCCCAGCACTTTGGGAGGCAGGCGGATCGCTTGAA...CAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGCAGTTGTTCCCTTCCTaGAAAGCAAAGTGCTACAGG +
Preference number: 4 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRQLFPS*KAKCYR
Trigger: CCTGTAGCACTTTGCTTTGCAGGAAGGGAACAACTG...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp GTTCGCCATGTTGACCAGGCTGGTCTTAACCTCCTTAGCTCAAGAGATCCACTGCTGGCCTGCTGCTCCTaGTTCCTATTCAAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: VRHVDQAGLNLLSSRDPLLACCS*FLFKWE
Trigger: CTCCCACTTGAATAGGAAGCAGGAGCAGCAGGCCAG...CAGTGGATCTCTTGAGCTAAGGAGGTTAAGACCAGCCTGGTCAACATGGCGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp CACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGTGCAACCTGGCCTGCTaGTCCTGCTTCCTATTCAAG +
Preference number: 4 (lower is better)
Translates to: HYGKGLGRSKGLFSGYWQCNLAC*SCFLFK
Trigger: CTTGAATAGGAAGCAGGAGCAGCAGGCCAGGTTGCA...CTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp CACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTTTCAGCTTCTAAACTaGCCCCTACCCCTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: HSFHYGKGLGRSKGLFSGFQLLN*PLPLGG
Trigger: GCCTCCTAGGGGTAGGGGGCAGTTTAGAAGCTGAAA...CCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CCA 90 bp GAGAGGTCACATGCCACATCAGGTTTTCACTCAGGAACTTCATGCCATAGGGGCCACTGCTCAGCCCCCTaGTTTCTTCGGACAAAGAGG +
Preference number: 4 (lower is better)
Translates to: ERSHATSGFHSGTSCHRGHCSAP*FLRTKR
Trigger: CCTCTTTGTCCGAAGAAACCAGGGGGCTGAGCAGTG...GCCCCTATGGCATGAAGTTCCTGAGTGAAAACCTGATGTGGCATGTGACCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CCA 90 bp CACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGATGAGGCTTAGAAGTTaGGCACTGCGCCACTGCTCA +
Preference number: 4 (lower is better)
Translates to: HSFHYGKGLGRSKGLFSGMRLRS*ALRHCS
Trigger: TGAGCAGTGGCGCAGTGCCCAACTTCTAAGCCTCAT...CCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp CTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGTGACATTCTCTGTGTaGCGAACCAGCCAGGTGACC +
Preference number: 4 (lower is better)
Translates to: LPLWQGFRKVQRALQWVLVTFSV*RTSQVT
Trigger: GGTCACCTGGCTGGTTCGCCACACAGAGAATGTCAC...CAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp TTGAGTCTGGCCTCCAGGTGGCTGCTGAGGTACTCAGAAGGGAAGATAGTATGTGTGACATTCTCTGTGTaGCGAACCAGCCAGGTGACC +
Preference number: 4 (lower is better)
Translates to: LSLASRWLLRYSEGKIVCVTFSV*RTSQVT
Trigger: GGTCACCTGGCTGGTTCGCCACACAGAGAATGTCAC...ACATACTATCTTCCCTTCTGAGTACCTCAGCAGCCACCTGGAGGCCAGACTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CCA 90 bp CCCATTCCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGATGGACTCCTCCTCTaGACACACAGACAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: PIPTPCESDHSFHYGKGLDGLLL*THRQVL
Trigger: CAGAACTTGTCTGTGTGTCCAGAGGAGGAGTCCATC...TAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CCA 90 bp ATAAGGGACTTCCCACCCTCTGTCCATCTACCTTTAGCACACATCCCTTGGCTTCCATGGTTCTTGAGGTaGGGGTACTCCTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: IRDFPPSVHLPLAHIPWLPWFLR*GYSSGH
Trigger: GTGCCCAGAGGAGTACCCCCACCTCAAGAACCATGG...AAGCCAAGGGATGTGTGCTAAAGGTAGATGGACAGAGGGTGGGAAGTCCCTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CCA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTAATTGCTGGTCTGCTTaGCCAACTCTTCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: MWPHALTFSISCPPCSQPNCWSA*PTLPGR
Trigger: CCTTCCTGGAAGAGTTGGCCAAGCAGACCAGCAATT...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CCA 90 bp CACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGCCAGGACGCAATTGCTaGTCTGCTTGGCCAACTCTT +
Preference number: 4 (lower is better)
Translates to: HSFHYGKGLGRSKGLFSGPGRNC*SAWPTL
Trigger: AAGAGTTGGCCAAGCAGACCAGCAATTGCGTCCTGG...CCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp CACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGCAAAGGGCTCTTCAGTaGGTACTGGCAGGCATTCAG +
Preference number: 4 (lower is better)
Translates to: HSFHYGKGLGRSKGLFSGQRALQ*VLAGIQ
Trigger: CTGAATGCCTGCCAGTACCCACTGAAGAGCCCTTTG...CCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp CACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGCAAAGGGCTCTTCAGTaGGTACTGGCAGGCATTCAG +
Preference number: 4 (lower is better)
Translates to: HYGKGLGRSKGLFSGYWQQRALQ*VLAGIQ
Trigger: CTGAATGCCTGCCAGTACCCACTGAAGAGCCCTTTG...CTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTCCACAGCTTCCACTATaGCAAGGGTTTAGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: MWPHALTFSISCPPCSQPPQLPL*QGFRKV
Trigger: GACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CCA 90 bp AGGACGCAATTGCTGGTCTGCTTGGCCAACTCTTCCAGGAAGGAGTTGCAGTGGCCACAGCTTCCACTATaGCAAGGGTTTAGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: RTQLLVCLANSSRKELQWPQLPL*QGFRKV
Trigger: GACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG...CCACTGCAACTCCTTCCTGGAAGAGTTGGCCAAGCAGACCAGCAATTGCGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CCA 90 bp CACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTCTGCTCATCAACTCTaGCTCCTGACCCTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: HSFHYGKGLGRSKGLFSGSAHQL*LLTLSP
Trigger: AGGAGAGAGGGTCAGGAGCCAGAGTTGATGAGCAGA...CCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CCA 90 bp CATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCATATGCAGATGCAGATaGAGGAGGGATCTCTATCCC +
Preference number: 4 (lower is better)
Translates to: HVAPRPNFFHKLSSMLPAICRCR*RRDLYP
Trigger: GGGATAGAGATCCCTCCTCCATCTGCATCTGCATAT...GGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CCA 90 bp GAGGCAGTGTTTCTACTGTCCAAACAAAAGGGGGCACCTATGCAAGTATCTTGCCCTCAACCTGCAACCTaGCCTGCTGCTCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: EAVFLLSKQKGAPMQVSCPQPAT*PAAPAS
Trigger: GGAAGCAGGAGCAGCAGGCCAGGTTGCAGGTTGAGG...GCAAGATACTTGCATAGGTGCCCCCTTTTGTTTGGACAGTAGAAACACTGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR CAA 72 bp AGCATTCGGGAGTGGAAGACAATGAGGTTCATCACCTaGGCTAAGTCAGGGTTCTCATGCAGGTGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: SIREWKTMRFIT*AKSGFSCRCRG
Trigger: CCCTCTGCACCTGCATGAGAACCCTGACTTAGCCAAGGTGATGAACCTCATTGTCTTCCACTCCCGAATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp CCCATTCCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGAGTTGAGGCACCCATaGCAAAGAAGAAACCCAATG +
Preference number: 4 (lower is better)
Translates to: PIPTPCESDHSFHYGKGLELRHP*QRRNPM
Trigger: CATTGGGTTTCTTCTTTGTCATGGGTGCCTCAACTC...TAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR TCA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGTGTCTTTGTCTTGGTaGCATTCTCTGTGTGGCGAA +
Preference number: 4 (lower is better)
Translates to: MWPHALTFSISCPPCSQPVSLSW*HSLCGE
Trigger: TTCGCCACACAGAGAATGTCACCAAGACAAAGACAC...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR TCA 90 bp CCCATTCCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGTGTCTTTGTCTTGGTaGCATTCTCTGTGTGGCGAA +
Preference number: 4 (lower is better)
Translates to: PIPTPCESDHSFHYGKGLVSLSW*HSLCGE
Trigger: TTCGCCACACAGAGAATGTCACCAAGACAAAGACAC...TAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR TCA 90 bp GGTGGAAGGCCCGAGACACCTCCCGATAGGCATTTCGAAGCAGGACATAAGGGAATTGCTGTATCACTTTaGTGTGTCTTCGGACCAGAG +
Preference number: 4 (lower is better)
Translates to: GGRPETPPDRHFEAGHKGIAVSL*CVFGPE
Trigger: CTCTGGTCCGAAGACACATCAAAGTGATACAGCAAT...TCCCTTATGTCCTGCTTCGAAATGCCTATCGGGAGGTGTCTCGGGCCTTCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCAATCTTGCCAAGTACTaGAGGTGGTATTGCTGTATC +
Preference number: 4 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACNLAKY*RWYCCI
Trigger: GATACAGCAATACCACCTTCAGTACTTGGCAAGATT...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR TCA 90 bp AGGACGCAATTGCTGGTCTGCTTGGCCAACTCTTCCAGGAAGGAGTTGCAGTGGGAGGATACTGACGAATaGGGACATGATGATGGACTC +
Preference number: 4 (lower is better)
Translates to: RTQLLVCLANSSRKELQWEDTDE*GHDDGL
Trigger: GAGTCCATCATCATGTCCTCATTCGTCAGTATCCTC...CCACTGCAACTCCTTCCTGGAAGAGTTGGCCAAGCAGACCAGCAATTGCGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp CCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGGGAGTGGAAGACAATaGGGTTCATCACCTTGGCTA +
Preference number: 4 (lower is better)
Translates to: PQLPLWQGFRKVQRALQWGSGRQ*GSSPWL
Trigger: TAGCCAAGGTGATGAACCTCATTGTCTTCCACTCCC...CCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp CACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGGGGAGTGGAAGACAATaGGGTTCATCACCTTGGCTA +
Preference number: 4 (lower is better)
Translates to: HSFHYGKGLGRSKGLFSGGSGRQ*GSSPWL
Trigger: TAGCCAAGGTGATGAACCTCATTGTCTTCCACTCCC...CCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp CTCTTCCCCCAACCGCGTGAGTGCATTTCAGCCATGTGCCAGCTTCTTCTCAAAGTGCAGTGGACAAAGTaGGCACAAATCAGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: LFPQPRECISAMCQLLLKVQWTK*AQIRGK
Trigger: TTTCCCCCTGATTTGTGCTCACTTTGTCCACTGCAC...TTTGAGAAGAAGCTGGCACATGGCTGAAATGCACTCACGCGGTTGGGGGAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp CACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGGTGCAGTGGACAAAGTaGGCACAAATCAGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: HSFHYGKGLGRSKGLFSGVQWTK*AQIRGK
Trigger: TTTCCCCCTGATTTGTGCTCACTTTGTCCACTGCAC...CCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp ACAGATCTCCAGGACGCAATTGCTGGTCTGCTTGGCCAACTCTTCCAGGAAGGAGTGCAGTGGACAAAGTaGGCACAAATCAGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: TDLQDAIAGLLGQLFQEGVQWTK*AQIRGK
Trigger: TTTCCCCCTGATTTGTGCTCACTTTGTCCACTGCAC...TCCTTCCTGGAAGAGTTGGCCAAGCAGACCAGCAATTGCGTCCTGGAGATCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp CACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGAAGGAGTTGCAGTGGTaGAGACCATGGTTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: HYGKGLGRSKGLFSGYWQKELQW*RPWFLR
Trigger: CCTCAAGAACCATGGTCTTCACCACTGCAACTCCTT...CTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp CTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCTTGTCCATGTTGGTaGCAATGCTGCGGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LPLWQGFRKVQRALQWVLACPCW*QCCGSS
Trigger: GGAAGAACCGCAGCATTGTCACCAACATGGACAAGC...CAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp CCCATTCCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAAACCAATGTATGCTTTaGCTCCTGCCAACAGCTCAG +
Preference number: 4 (lower is better)
Translates to: PIPTPCESDHSFHYGKGLNQCML*LLPTAQ
Trigger: CTGAGCTGTTGGCAGGAGTCAAAGCATACATTGGTT...TAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR TCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCCAAAAACTGGGCCAGTaGCTGTATGAAACCAATGTA +
Preference number: 4 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACQKLGQ*LYETNV
Trigger: TACATTGGTTTCATACAGTCACTGGCCCAGTTTTTG...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR TCA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCATTGTGTAGAGTGTGGTaGTTGTCTGTTCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQALCRVW*LSVPHR
Trigger: CCTGTGGGGAACAGACAATCACCACACTCTACACAA...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCATTCAGCTCCACAATCTaGGAGGTCACATGCCACATC +
Preference number: 4 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQAFSSTI*EVTCHI
Trigger: GATGTGGCATGTGACCTCTCAGATTGTGGAGCTGAA...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCCCACCAGAAATTCCTTaGGGTGAGTTTCAATGTTCT +
Preference number: 4 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACPPEIP*GEFQCS
Trigger: AGAACATTGAAACTCACCTCAAGGAATTTCTGGTGG...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR TCA 90 bp GAGGCAGTGTTTCTACTGTCCAAACAAAAGGGGGCACCTATGCAAGTATCTTGCAAGGAAGAGACCCAATaGCCCCTCGAAGAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: EAVFLLSKQKGAPMQVSCKEETQ*PLEEPH
Trigger: GTGGGGCTCTTCGAGGGGTCATTGGGTCTCTTCCTT...GCAAGATACTTGCATAGGTGCCCCCTTTTGTTTGGACAGTAGAAACACTGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp CCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGAGTTTAGTGCTATCTTaGAAGCCCCCAGGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: PQLPLWQGFRKVQRALQWSLVLS*KPPGSV
Trigger: CACAGAGCCTGGGGGCTTTCAAGATAGCACTAAACT...CCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp CTCTTCCCCCAACCGCGTGAGTGCATTTCAGCCATGTGCCAGCTTCTTCTCAAAGTGGATTCACAGAAGTaGTGCATGGGGGCCACTATT +
Preference number: 4 (lower is better)
Translates to: LFPQPRECISAMCQLLLKVDSQK*CMGATI
Trigger: AATAGTGGCCCCCATGCATCACTTCTGTGAATCCAC...TTTGAGAAGAAGCTGGCACATGGCTGAAATGCACTCACGCGGTTGGGGGAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCAAGACCCCCTGCTCCTaGTTCATTTTAAGGCTAATT +
Preference number: 4 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACKTPCS*FILRLI
Trigger: AATTAGCCTTAAAATGAATCAGGAGCAGGGGGTCTT...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp CTCTTCCCCCAACCGCGTGAGTGCATTTCAGCCATGTGCCAGCTTCTTCTCAAAAGAAATGGCTGCATCTaGGACCCTAGTCACACTCCT +
Preference number: 4 (lower is better)
Translates to: LFPQPRECISAMCQLLLKRNGCI*DPSHTP
Trigger: AGGAGTGTGACTAGGGTCTCAGATGCAGCCATTTCT...TTTGAGAAGAAGCTGGCACATGGCTGAAATGCACTCACGCGGTTGGGGGAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp GAGGCAGTGTTTCTACTGTCCAAACAAAAGGGGGCACCTATGCAAGTATCTTGCTTAGAAGTTGGGCACTaGGCCACTGCTCAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: EAVFLLSKQKGAPMQVSCLEVGH*ATAQPP
Trigger: AGGGGGCTGAGCAGTGGCGCAGTGCCCAACTTCTAA...GCAAGATACTTGCATAGGTGCCCCCTTTTGTTTGGACAGTAGAAACACTGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp CACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGTGACTTTGTGCACCTaGAGCACATCCTCACGGATA +
Preference number: 4 (lower is better)
Translates to: HYGKGLGRSKGLFSGYWQVTLCT*STSSRI
Trigger: TATCCGTGAGGATGTGCTGCAGGTGCACAAAGTCAC...CTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR GCA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGAAAGTAGCTCTGCAATaGTCGAGTCAGCATAGTCCT +
Preference number: 4 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRKVALQ*SSQHSP
Trigger: AGGACTATGCTGACTCGAGCATTGCAGAGCTACTTT...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR GCA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCAGGCACATCTCATGAGTaGAGTGGACAAAGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQAGTSHE*SGQSEH
Trigger: GTGCTCACTTTGTCCACTGCACTCATGAGATGTGCC...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR GCA 90 bp CCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGGCACATCTCATGAGTaGAGTGGACAAAGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: PQLPLWQGFRKVQRALQWGTSHE*SGQSEH
Trigger: GTGCTCACTTTGTCCACTGCACTCATGAGATGTGCC...CCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR GCA 90 bp CCCATTCCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAATTGTAGTGGCACAGTaGTTAGGTAGAAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: PIPTPCESDHSFHYGKGLIVVAQ*LGRSCS
Trigger: CGAGCAGCTTCTACCTAAGCACTGTGCCACTACAAT...TAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp CTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGTATGCTTTGACTCCTaGCAACAGCTCAGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: LPLWQGFRKVQRALQWVLVCFDS*QQLRRP
Trigger: CGGCCTTCTGAGCTGTTGGCAGGAGTCAAAGCATAC...CAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR GCA 90 bp GTTCGCCATGTTGACCAGGCTGGTCTTAACCTCCTTAGCTCAAGAGATCCACTGGACTCTGGAAGCATCTaGACCCAAAAACTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: VRHVDQAGLNLLSSRDPLDSGSI*TQKLGQ
Trigger: CTGGCCCAGTTTTTGGGTGCAGATGCTTCCAGAGTC...CAGTGGATCTCTTGAGCTAAGGAGGTTAAGACCAGCCTGGTCAACATGGCGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp CTCTTCCCCCAACCGCGTGAGTGCATTTCAGCCATGTGCCAGCTTCTTCTCAAAGATGGTCCCACTGCTTaGCTGTCTAAGCAGACTTTC +
Preference number: 4 (lower is better)
Translates to: LFPQPRECISAMCQLLLKDGPTA*LSKQTF
Trigger: GAAAGTCTGCTTAGACAGGCAAGCAGTGGGACCATC...TTTGAGAAGAAGCTGGCACATGGCTGAAATGCACTCACGCGGTTGGGGGAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp CTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGTCAGAGAACTCCTCTaGACTGAAGTTCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: LPLWQGFRKVQRALQWVLVRELL*TEVLLP
Trigger: GGGGAGCAGAACTTCAGTGCAGAGGAGTTCTCTGAC...CAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR GCA 90 bp GTTCGCCATGTTGACCAGGCTGGTCTTAACCTCCTTAGCTCAAGAGATCCACTGCACTCAGGAACTTCATaGCATAGGGGCCCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: VRHVDQAGLNLLSSRDPLHSGTS*HRGPGV
Trigger: AACTCCTGGGCCCCTATGGCATGAAGTTCCTGAGTG...CAGTGGATCTCTTGAGCTAAGGAGGTTAAGACCAGCCTGGTCAACATGGCGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp CATCTCATGAGTGCAGTGGACAAAGTGAGCACAAATCAGGGGGAAAGCAATGGCGTCACAGCCCACACCTaGAGCAGATGCCAGCTCAAA +
Preference number: 4 (lower is better)
Translates to: HLMSAVDKVSTNQGESNGVTAHT*SRCQLK
Trigger: TTTGAGCTGGCATCTGCTGCAGGTGTGGGCTGTGAC...GCCATTGCTTTCCCCCTGATTTGTGCTCACTTTGTCCACTGCACTCATGAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR GCA 90 bp CACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGGAGTGGGAGGGAAACTaGCAGAAAGATCAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: HSFHYGKGLGRSKGLFSGEWEGN*QKDQEQ
Trigger: CTGCTCTTGATCTTTCTGGCAGTTTCCCTCCCACTC...CCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR GCA 90 bp CCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGAGTGGGAGGGAAACTaGCAGAAAGATCAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: PQLPLWQGFRKVQRALQWEWEGN*QKDQEQ
Trigger: CTGCTCTTGATCTTTCTGGCAGTTTCCCTCCCACTC...CCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR GCA 90 bp GAGGCAGTGTTTCTACTGTCCAAACAAAAGGGGGCACCTATGCAAGTATCTTGCCCCATTCCCACCCCCTaGGAAAGTGACCACAGCTTC +
Preference number: 4 (lower is better)
Translates to: EAVFLLSKQKGAPMQVSCPIPTP*ESDHSF
Trigger: GAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG...GCAAGATACTTGCATAGGTGCCCCCTTTTGTTTGGACAGTAGAAACACTGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGTTCTTCCACAGATCTaGTCATCAACTCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: MWPHALTFSISCPPCSQPVLPQI*SSTLAP
Trigger: AGGAGCCAGAGTTGATGAGCAGATCTGTGGAAGAAC...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp CCCATTCCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGTTCTTCCACAGATCTaGTCATCAACTCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: PIPTPCESDHSFHYGKGLVLPQI*SSTLAP
Trigger: AGGAGCCAGAGTTGATGAGCAGATCTGTGGAAGAAC...TAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp CTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGTCCATGCTCCCAGCCTaGCTCACTGCTCTACGATTT +
Preference number: 4 (lower is better)
Translates to: LPLWQGFRKVQRALQWVLSMLPA*LTALRF
Trigger: AAATCGTAGAGCAGTGAGGCAGGCTGGGAGCATGGA...CAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCATCACCCAGACTGGAGTaGAATGGCATCATCTTCGCT +
Preference number: 4 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQASPRLE*NGIIFA
Trigger: AGCGAAGATGATGCCATTGCACTCCAGTCTGGGTGA...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp CATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCATTTCAGCCATGTaGCAGCTTCTTCTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: HVAPRPNFFHKLSSMLPACISAM*QLLLKV
Trigger: GACTTTGAGAAGAAGCTGGCACATGGCTGAAATGCA...GGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp CATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCGACAAGAGAAAAGTCTaGTCCTCAATCTCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: HVAPRPNFFHKLSSMLPADKRKV*SSISPE
Trigger: CTCTGGAGAGATTGAGGAGCAGACTTTTCTCTTGTC...GGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CCA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTCCATGCAGCATCTCATaGGCACAATTGTACATGCCA +
Preference number: 4 (lower is better)
Translates to: MWPHALTFSISCPPCSQPPCSIS*AQLYMP
Trigger: TGGCATGTACAATTGTGCCCATGAGATGCTGCATGG...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CCA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCAGATGGACTCCTCCTCTaGACACACAGACAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQADGLLL*THRQVL
Trigger: CAGAACTTGTCTGTGTGTCCAGAGGAGGAGTCCATC...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CCA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCATCAGGGGGAAAGCAATaGCATAACGCAACATGGCAG +
Preference number: 4 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQASGGKQ*HNATWQ
Trigger: CTGCCATGTTGCGTTATGCCATTGCTTTCCCCCTGA...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp CCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGAATTGCTGGTCTGCTTaGCCAACTCTTCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PQLPLWQGFRKVQRALQWNCWSA*PTLPGR
Trigger: CCTTCCTGGAAGAGTTGGCCAAGCAGACCAGCAATT...CCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp GATACTCAAGGTCACCTTGATGTCTGTGTCTGGAGTGACAAACTCCTTCAAGCAGTGACTCTCAGCTCCTaGCTTGTCCCTCTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: DTQGHLDVCVWSDKLLQAVTLSS*LVPLGL
Trigger: GAGCCCGAGAGGGACAAGCCAGGAGCTGAGAGTCAC...TGCTTGAAGGAGTTTGTCACTCCAGACACAGACATCAAGGTGACCTTGAGTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CCA 90 bp ATAAGGGACTTCCCACCCTCTGTCCATCTACCTTTAGCACACATCCCTTGGCTTAGTCTGGCCTCCAGGTaGCTGCTGAGGTACTCAGAA +
Preference number: 4 (lower is better)
Translates to: IRDFPPSVHLPLAHIPWLSLASR*LLRYSE
Trigger: TTCTGAGTACCTCAGCAGCCACCTGGAGGCCAGACT...AAGCCAAGGGATGTGTGCTAAAGGTAGATGGACAGAGGGTGGGAAGTCCCTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CCA 90 bp CTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGTCAGTGGCAAGGAGTaGGAGGGAAACTGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: LPLWQGFRKVQRALQWVLVSGKE*EGNCQK
Trigger: TTTCTGGCAGTTTCCCTCCCACTCCTTGCCACTGAC...CAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp CCCATTCCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTACTCTTCAGTGGGTACTaGCAGGCATTCAGTTTAGGT +
Preference number: 4 (lower is better)
Translates to: PIPTPCESDHSFHYGKGLLFSGY*QAFSLG
Trigger: ACCTAAACTGAATGCCTGCCAGTACCCACTGAAGAG...TAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CCA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTCTCTTCAGTGGGTACTaGCAGGCATTCAGTTTAGGT +
Preference number: 4 (lower is better)
Translates to: MWPHALTFSISCPPCSQPLFSGY*QAFSLG
Trigger: ACCTAAACTGAATGCCTGCCAGTACCCACTGAAGAG...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CCA 90 bp CCCATTCCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAACTTCTCCCTGGCAGTaGATTCACAGAAGTGATGCA +
Preference number: 4 (lower is better)
Translates to: PIPTPCESDHSFHYGKGLTSPWQ*IHRSDA
Trigger: TGCATCACTTCTGTGAATCCACTGCCAGGGAGAAGT...TAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CCA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTTTCTCCACTTCTCCCTaGCAGTGGATTCACAGAAGT +
Preference number: 4 (lower is better)
Translates to: MWPHALTFSISCPPCSQPFSTSP*QWIHRS
Trigger: ACTTCTGTGAATCCACTGCCAGGGAGAAGTGGAGAA...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCCAGTTATCCTGGTTGTaGCAGTGTACTACAGTTTTG +
Preference number: 4 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACQLSWL*QCTTVL
Trigger: CAAAACTGTAGTACACTGCCACAACCAGGATAACTG...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CCA 90 bp CCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGCAGCCTGGAATGCTGTaGCAGGATCTTAGCTTACTG +
Preference number: 4 (lower is better)
Translates to: PQLPLWQGFRKVQRALQWQPGML*QDLSLL
Trigger: CAGTAAGCTAAGATCCTGCCACAGCATTCCAGGCTG...CCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CCA 90 bp CACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGCTCCCTCCTGGATCCTaGTATTCACAGCACAGTTGT +
Preference number: 4 (lower is better)
Translates to: HYGKGLGRSKGLFSGYWQLPPGS*YSQHSC
Trigger: ACAACTGTGCTGTGAATACCAGGATCCAGGAGGGAG...CTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CCA 90 bp CATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCTTCCTATTCAAGTaGGAGGGAGAGTACTTGACA +
Preference number: 4 (lower is better)
Translates to: HVAPRPNFFHKLSSMLPACFLFK*EGEYLT
Trigger: TGTCAAGTACTCTCCCTCCCACTTGAATAGGAAGCA...GGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCCTTAGATTTGGGGTCTaGACAAGTCTTCTTGATGTT +
Preference number: 4 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACLRFGV*TSLLDV
Trigger: AACATCAAGAAGACTTGTTCAGACCCCAAATCTAAG...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCAACTGGCTATTGGAGTTaGGGCACCCATGACAAAGAA +
Preference number: 4 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQATGYWS*GTHDKE
Trigger: TTCTTTGTCATGGGTGCCTCAACTCCAATAGCCAGT...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTCACACAGACAAGTTCTaGATGATGTCACTGAGCACA +
Preference number: 4 (lower is better)
Translates to: MWPHALTFSISCPPCSQPHTDKF*MMSLST
Trigger: TGTGCTCAGTGACATCATTCAGAACTTGTCTGTGTG...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR TCA 90 bp CCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGAGGATACTGACGAATaGGGACATGATGATGGACTC +
Preference number: 4 (lower is better)
Translates to: PQLPLWQGFRKVQRALQWEDTDE*GHDDGL
Trigger: GAGTCCATCATCATGTCCTCATTCGTCAGTATCCTC...CCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp CACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGGAGGATACTGACGAATaGGGACATGATGATGGACTC +
Preference number: 4 (lower is better)
Translates to: HSFHYGKGLGRSKGLFSGEDTDE*GHDDGL
Trigger: GAGTCCATCATCATGTCCTCATTCGTCAGTATCCTC...CCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp GTTCGCCATGTTGACCAGGCTGGTCTTAACCTCCTTAGCTCAAGAGATCCACTGTTCAGCTCCACAATCTaGGAGGTCACATGCCACATC +
Preference number: 4 (lower is better)
Translates to: VRHVDQAGLNLLSSRDPLFSSTI*EVTCHI
Trigger: GATGTGGCATGTGACCTCTCAGATTGTGGAGCTGAA...CAGTGGATCTCTTGAGCTAAGGAGGTTAAGACCAGCCTGGTCAACATGGCGAAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp CACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTGTCTGTGTCTGGAGTaGCAAACTCCTTCAAGCACT +
Preference number: 4 (lower is better)
Translates to: HSFHYGKGLGRSKGLFSGCLCLE*QTPSST
Trigger: AGTGCTTGAAGGAGTTTGTCACTCCAGACACAGACA...CCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTTCCTCCTCAGGAGATaGAGTATCAGCTTTCAGATT +
Preference number: 4 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRFLLRR*SISFQI
Trigger: AATCTGAAAGCTGATACTTCATCTCCTGAGGAGGAA...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp GTTCGCCATGTTGACCAGGCTGGTCTTAACCTCCTTAGCTCAAGAGATCCACTGCAGCAGACACCTGGATaGTGGCTTTGGTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: VRHVDQAGLNLLSSRDPLQQTPG*WLWSSN
Trigger: ATTGCTTGACCAAAGCCATCATCCAGGTGTCTGCTG...CAGTGGATCTCTTGAGCTAAGGAGGTTAAGACCAGCCTGGTCAACATGGCGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp CCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGCAGCTATACCCAGGCTaGCAAAAGGATTTGGGGTTA +
Preference number: 4 (lower is better)
Translates to: PQLPLWQGFRKVQRALQWQLYPG*QKDLGL
Trigger: TAACCCCAAATCCTTTTGTCAGCCTGGGTATAGCTG...CCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCAGAGGGATCCTTGTGGTaGTGGAACTGTTCTGTATCT +
Preference number: 4 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQAEGSLW*WNCSVS
Trigger: AGATACAGAACAGTTCCATCACCACAAGGATCCCTC...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp CACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGGCTCAAGTTAACTTCTaGCTTCCTCAACCTGCAACC +
Preference number: 4 (lower is better)
Translates to: HSFHYGKGLGRSKGLFSGAQVNF*LPQPAT
Trigger: GGTTGCAGGTTGAGGAAGTCAGAAGTTAACTTGAGC...CCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp GAGGCAGTGTTTCTACTGTCCAAACAAAAGGGGGCACCTATGCAAGTATCTTGCGGTGACGGATGGATGTaGTCTGCCTCCTACGGGAAT +
Preference number: 4 (lower is better)
Translates to: EAVFLLSKQKGAPMQVSCGDGWM*SASYGN
Trigger: ATTCCCGTAGGAGGCAGATCACATCCATCCGTCACC...GCAAGATACTTGCATAGGTGCCCCCTTTTGTTTGGACAGTAGAAACACTGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCAGGTTGGAAGGAGGAGTaGTCAGGAGAAGGTATTTAC +
Preference number: 4 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQAGWKEE*SGEGIY
Trigger: GTAAATACCTTCTCCTGATCACTCCTCCTTCCAACC...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp CTCTTCCCCCAACCGCGTGAGTGCATTTCAGCCATGTGCCAGCTTCTTCTCAAATGTCTGCCACTCTCTTaGCATACCCTTTCAAACTGC +
Preference number: 4 (lower is better)
Translates to: LFPQPRECISAMCQLLLKCLPLS*HTLSNC
Trigger: GCAGTTTGAAAGGGTATGGCAAGAGAGTGGCAGACA...TTTGAGAAGAAGCTGGCACATGGCTGAAATGCACTCACGCGGTTGGGGGAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp CCCATTCCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAAAAGTAGCTCTGCAATaGTCGAGTCAGCATAGTCCT +
Preference number: 4 (lower is better)
Translates to: PIPTPCESDHSFHYGKGLKVALQ*SSQHSP
Trigger: AGGACTATGCTGACTCGAGCATTGCAGAGCTACTTT...TAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp AAGGCCTGCATGGCTGGGGAGAGGATGATGGTCCCACTGCTTGCCTGTCTAAGCAAGAGCATCAAATCTTaGCAAGTACTGAAGGTGGTA +
Preference number: 4 (lower is better)
Translates to: KACMAGERMMVPLLACLSKSIKS*QVLKVV
Trigger: TACCACCTTCAGTACTTGGCAAGATTTGATGCTCTT...GCTTAGACAGGCAAGCAGTGGGACCATCATCCTCTCCCCAGCCATGCAGGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR GCA 90 bp CTCTTCCCCCAACCGCGTGAGTGCATTTCAGCCATGTGCCAGCTTCTTCTCAAAATTGTAGTGGCACAGTaGTTAGGTAGAAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: LFPQPRECISAMCQLLLKIVVAQ*LGRSCS
Trigger: CGAGCAGCTTCTACCTAAGCACTGTGCCACTACAAT...TTTGAGAAGAAGCTGGCACATGGCTGAAATGCACTCACGCGGTTGGGGGAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp CACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGCACACCTGCAGCAGATaGCAGCTCAAAGATACTCAA +
Preference number: 4 (lower is better)
Translates to: HSFHYGKGLGRSKGLFSGHTCSR*QLKDTQ
Trigger: TTGAGTATCTTTGAGCTGGCATCTGCTGCAGGTGTG...CCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR GCA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCACACACCTGCAGCAGATaGCAGCTCAAAGATACTCAA +
Preference number: 4 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQAHTCSR*QLKDTQ
Trigger: TTGAGTATCTTTGAGCTGGCATCTGCTGCAGGTGTG...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR GCA 90 bp GAGTTCTGCCAAGGCCCGCATCTCAGAGATGTCAGAGAACTCCTCTGCACTGAACACACCTGCAGCAGATaGCAGCTCAAAGATACTCAA +
Preference number: 4 (lower is better)
Translates to: EFCQGPHLRDVRELLCTEHTCSR*QLKDTQ
Trigger: TTGAGTATCTTTGAGCTGGCATCTGCTGCAGGTGTG...TTCAGTGCAGAGGAGTTCTCTGACATCTCTGAGATGCGGGCCTTGGCAGAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR GCA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTCTTCCCTGGCTACCTTaGAGAATTGCTATAAGGATG +
Preference number: 4 (lower is better)
Translates to: MWPHALTFSISCPPCSQPLPWLP*RIAIRM
Trigger: CATCCTTATAGCAATTCTGCAAGGTAGCCAGGGAAG...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CCA 90 bp GCTCTTCAGTGGGTACTGGCAGGCATTCAGTTTAGGTGGAAGGCCCGAGACACCATATCAAAATGGCACTaGCAGGCATCAATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: ALQWVLAGIQFRWKARDTISKWH*QASMVL
Trigger: CAACACCATTGATGCCTGCCAGTGCCATTTTGATAT...GGTGTCTCGGGCCTTCCACCTAAACTGAATGCCTGCCAGTACCCACTGAAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCAGATTGATATCAAAATaGCACTGGCAGGCATCAATG +
Preference number: 4 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACRLISK*HWQASM
Trigger: CATTGATGCCTGCCAGTGCCATTTTGATATCAATCT...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CCA 90 bp AAGGCCTGCATGGCTGGGGAGAGGATGATGGTCCCACTGCTTGCCTGTCTAAGCAGATTGATATCAAAATaGCACTGGCAGGCATCAATG +
Preference number: 4 (lower is better)
Translates to: KACMAGERMMVPLLACLSRLISK*HWQASM
Trigger: CATTGATGCCTGCCAGTGCCATTTTGATATCAATCT...GCTTAGACAGGCAAGCAGTGGGACCATCATCCTCTCCCCAGCCATGCAGGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CCA 90 bp CCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGAGCTTCTTCAGAGGGTaGTCATACTCCAAGACCATC +
Preference number: 4 (lower is better)
Translates to: PQLPLWQGFRKVQRALQWSFFRG*SYSKTI
Trigger: GATGGTCTTGGAGTATGACCACCCTCTGAAGAAGCT...CCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp CACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGAGCTTCTTCAGAGGGTaGTCATACTCCAAGACCATC +
Preference number: 4 (lower is better)
Translates to: HYGKGLGRSKGLFSGYWQSFFRG*SYSKTI
Trigger: GATGGTCTTGGAGTATGACCACCCTCTGAAGAAGCT...CTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp TTGAGTCTGGCCTCCAGGTGGCTGCTGAGGTACTCAGAAGGGAAGATAGTATGTAGCTTCCACAGCTTCTaGCACTGGCTATTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: LSLASRWLLRYSEGKIVCSFHSF*HWLLEL
Trigger: CAACTCCAATAGCCAGTGCCAGAAGCTGTGGAAGCT...ACATACTATCTTCCCTTCTGAGTACCTCAGCAGCCACCTGGAGGCCAGACTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CCA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTTCTGCACCCAAAAACTaGGCCAGTGACTGTATGAAA +
Preference number: 4 (lower is better)
Translates to: MWPHALTFSISCPPCSQPSAPKN*ASDCMK
Trigger: TTTCATACAGTCACTGGCCCAGTTTTTGGGTGCAGA...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CCA 90 bp CCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGACTGACCCTCTGCTCTaGGTTGTGGAGATATCAAAG +
Preference number: 4 (lower is better)
Translates to: PQLPLWQGFRKVQRALQWTDPLL*VVEISK
Trigger: CTTTGATATCTCCACAACCCAGAGCAGAGGGTCAGT...CCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CCA 90 bp CCCATTCCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTACTGTCCCTTCACCTCTaGACATTCACTTTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: PIPTPCESDHSFHYGKGLLSLHL*TFTFCF
Trigger: GAAGCAAAAAGTGAATGTCCAGAGGTGAAGGGACAG...TAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp TTTTTCTACGGAGTCCAGCATTCGGGAGTGGAAGACAATGAGGTTCATCACCTTAGACATGATGGCCACTaGGAGAGGAGCACCAGACAG +
Preference number: 4 (lower is better)
Translates to: FFYGVQHSGVEDNEVHHLRHDGH*ERSTRQ
Trigger: CTGTCTGGTGCTCCTCTCTCAGTGGCCATCATGTCT...AAGGTGATGAACCTCATTGTCTTCCACTCCCGAATGCTGGACTCCGTAGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp AGGGCGTTGCGGATGACTCTGGAAGCATCTGCACCCAAAAACTGGGCCAGTGACCTTAGATTTGGGGTCTaGACAAGTCTTCTTGATGTT +
Preference number: 4 (lower is better)
Translates to: RALRMTLEASAPKNWASDLRFGV*TSLLDV
Trigger: AACATCAAGAAGACTTGTTCAGACCCCAAATCTAAG...GTCACTGGCCCAGTTTTTGGGTGCAGATGCTTCCAGAGTCATCCGCAACGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp CCCATTCCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAAATTGTACATGCCAATaGGTATCCGCCGATCTTCAA +
Preference number: 4 (lower is better)
Translates to: PIPTPCESDHSFHYGKGLNCTCQ*VSADLQ
Trigger: TTGAAGATCGGCGGATACTCATTGGCATGTACAATT...TAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR TCA 90 bp GTTCGCCATGTTGACCAGGCTGGTCTTAACCTCCTTAGCTCAAGAGATCCACTGACTGGCTATTGGAGTTaGGGCACCCATGACAAAGAA +
Preference number: 4 (lower is better)
Translates to: VRHVDQAGLNLLSSRDPLTGYWS*GTHDKE
Trigger: TTCTTTGTCATGGGTGCCTCAACTCCAATAGCCAGT...CAGTGGATCTCTTGAGCTAAGGAGGTTAAGACCAGCCTGGTCAACATGGCGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp GAGAGGTCACATGCCACATCAGGTTTTCACTCAGGAACTTCATGCCATAGGGGCACTGGCTATTGGAGTTaGGGCACCCATGACAAAGAA +
Preference number: 4 (lower is better)
Translates to: ERSHATSGFHSGTSCHRGTGYWS*GTHDKE
Trigger: TTCTTTGTCATGGGTGCCTCAACTCCAATAGCCAGT...GCCCCTATGGCATGAAGTTCCTGAGTGAAAACCTGATGTGGCATGTGACCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp CACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGATTGCTGTATCACTTTaGTGTGTCTTCGGACCAGAG +
Preference number: 4 (lower is better)
Translates to: HYGKGLGRSKGLFSGYWQIAVSL*CVFGPE
Trigger: CTCTGGTCCGAAGACACATCAAAGTGATACAGCAAT...CTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp CATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCCATTATCAACTTGTTTaGGATTCAGAGAGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: HVAPRPNFFHKLSSMLPAHYQLV*DSERRG
Trigger: TCCTCTCCTCTCTGAATCTCAAACAAGTTGATAATG...GGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR TCA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGTCCAGCCTCAATCCTaGGAATTCAAATTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: MWPHALTFSISCPPCSQPVQPQS*EFKFFS
Trigger: GGAGAAAAATTTGAATTCTCAGGATTGAGGCTGGAC...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR TCA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCTCAAAGATACGAAGATaGAAGCAGAAAGTAGACAGA +
Preference number: 4 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACSKIRR*KQKVDR
Trigger: TCTGTCTACTTTCTGCTTTCATCTTCGTATCTTTGA...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR TCA 90 bp TGTGTAGAGTGTGGTGATTGTCTGTTCCCCACAGGAATCCAGTGGTTGTGTCTGAAGGAGTTGCAGTGGTaGAGACCATGGTTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: CVECGDCLFPTGIQWLCLKELQW*RPWFLR
Trigger: CCTCAAGAACCATGGTCTTCACCACTGCAACTCCTT...CAGACACAACCACTGGATTCCTGTGGGGAACAGACAATCACCACACTCTACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp CTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGAACCAATGTATGCTTTaGCTCCTGCCAACAGCTCAG +
Preference number: 4 (lower is better)
Translates to: LPLWQGFRKVQRALQWVLNQCML*LLPTAQ
Trigger: CTGAGCTGTTGGCAGGAGTCAAAGCATACATTGGTT...CAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp CACCACCAGCTTCTTCAGCTCCACAATCTGAGAGGTCACATGCCACATCAGGTTAACCAATGTATGCTTTaGCTCCTGCCAACAGCTCAG +
Preference number: 4 (lower is better)
Translates to: HHQLLQLHNLRGHMPHQVNQCML*LLPTAQ
Trigger: CTGAGCTGTTGGCAGGAGTCAAAGCATACATTGGTT...AACCTGATGTGGCATGTGACCTCTCAGATTGTGGAGCTGAAGAAGCTGGTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTCAAAAACTGGGCCAGTaGCTGTATGAAACCAATGTA +
Preference number: 4 (lower is better)
Translates to: MWPHALTFSISCPPCSQPQKLGQ*LYETNV
Trigger: TACATTGGTTTCATACAGTCACTGGCCCAGTTTTTG...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR TCA 90 bp AGGACGCAATTGCTGGTCTGCTTGGCCAACTCTTCCAGGAAGGAGTTGCAGTGGCAAAAACTGGGCCAGTaGCTGTATGAAACCAATGTA +
Preference number: 4 (lower is better)
Translates to: RTQLLVCLANSSRKELQWQKLGQ*LYETNV
Trigger: TACATTGGTTTCATACAGTCACTGGCCCAGTTTTTG...CCACTGCAACTCCTTCCTGGAAGAGTTGGCCAAGCAGACCAGCAATTGCGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp ATAAGGGACTTCCCACCCTCTGTCCATCTACCTTTAGCACACATCCCTTGGCTTTTGTGTAGAGTGTGGTaGTTGTCTGTTCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: IRDFPPSVHLPLAHIPWLLCRVW*LSVPHR
Trigger: CCTGTGGGGAACAGACAATCACCACACTCTACACAA...AAGCCAAGGGATGTGTGCTAAAGGTAGATGGACAGAGGGTGGGAAGTCCCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp CATGAGTGCAGTGGACAAAGTGAGCACAAATCAGGGGGAAAGCAATGGCATAACAGAACTCCTCTGCACTaGAGTTCTGCTCCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: HECSGQSEHKSGGKQWHNRTPLH*SSAPLL
Trigger: GAGAAGGGGAGCAGAACTTCAGTGCAGAGGAGTTCT...GTTATGCCATTGCTTTCCCCCTGATTTGTGCTCACTTTGTCCACTGCACTCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp TTGAGTCTGGCCTCCAGGTGGCTGCTGAGGTACTCAGAAGGGAAGATAGTATGTTGTCTGTGTCTGGAGTaGCAAACTCCTTCAAGCACT +
Preference number: 4 (lower is better)
Translates to: LSLASRWLLRYSEGKIVCCLCLE*QTPSST
Trigger: AGTGCTTGAAGGAGTTTGTCACTCCAGACACAGACA...ACATACTATCTTCCCTTCTGAGTACCTCAGCAGCCACCTGGAGGCCAGACTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp CATCTCATGAGTGCAGTGGACAAAGTGAGCACAAATCAGGGGGAAAGCAATGGCCAGCAGACACCTGGATaGTGGCTTTGGTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: HLMSAVDKVSTNQGESNGQQTPG*WLWSSN
Trigger: ATTGCTTGACCAAAGCCATCATCCAGGTGTCTGCTG...GCCATTGCTTTCCCCCTGATTTGTGCTCACTTTGTCCACTGCACTCATGAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp CACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCAGTAGGAGCAGGTTaGATGTTTGCTGAACACATT +
Preference number: 4 (lower is better)
Translates to: HYGKGLGRSKGLFSGYWQAVGAG*MFAEHI
Trigger: AATGTGTTCAGCAAACATTCAACCTGCTCCTACTGC...CTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp CCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGAATTGCCTGAAATGCTaGTGGGTCCTGTTACTTCTC +
Preference number: 4 (lower is better)
Translates to: PQLPLWQGFRKVQRALQWNCLKC*WVLLLL
Trigger: GAGAAGTAACAGGACCCATCAGCATTTCAGGCAATT...CCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp GAGGCAGTGTTTCTACTGTCCAAACAAAAGGGGGCACCTATGCAAGTATCTTGCTTGAGGTGTGGGGGCTaGAGGGGGATTCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: EAVFLLSKQKGAPMQVSCLRCGG*RGIHLH
Trigger: ATGAAGATGAATCCCCCTTCAGCCCCCACACCTCAA...GCAAGATACTTGCATAGGTGCCCCCTTTTGTTTGGACAGTAGAAACACTGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp GAGGCAGTGTTTCTACTGTCCAAACAAAAGGGGGCACCTATGCAAGTATCTTGCTGCTTTGGCAGTAGGTaGCGGATGGATGTGATCTGC +
Preference number: 4 (lower is better)
Translates to: EAVFLLSKQKGAPMQVSCCFGSR*RMDVIC
Trigger: GCAGATCACATCCATCCGTCACCTACTGCCAAAGCA...GCAAGATACTTGCATAGGTGCCCCCTTTTGTTTGGACAGTAGAAACACTGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGTCCTAAATGTTGCGTaGTGTTTCGGACATCTATGT +
Preference number: 4 (lower is better)
Translates to: MWPHALTFSISCPPCSQPVLNVA*CFGHLC
Trigger: ACATAGATGTCCGAAACAGCACGCAACATTTAGGAC...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp ATAAGGGACTTCCCACCCTCTGTCCATCTACCTTTAGCACACATCCCTTGGCTTGTGACTTTGTGCACCTaGAGCACATCCTCACGGATA +
Preference number: 4 (lower is better)
Translates to: IRDFPPSVHLPLAHIPWLVTLCT*STSSRI
Trigger: TATCCGTGAGGATGTGCTGCAGGTGCACAAAGTCAC...AAGCCAAGGGATGTGTGCTAAAGGTAGATGGACAGAGGGTGGGAAGTCCCTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp GGTGGAAGGCCCGAGACACCTCCCGATAGGCATTTCGAAGCAGGACATAAGGGACAATTACATGTTCCTTaGTCTCCTTTATGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: GGRPETPPDRHFEAGHKGQLHVP*SPLCLP
Trigger: TGGCAGACATAAAGGAGAGCAAGGAACATGTAATTG...TCCCTTATGTCCTGCTTCGAAATGCCTATCGGGAGGTGTCTCGGGCCTTCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR GCA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGAAACTGGCCACTGTTTaGAATTACATGTTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRKLATV*NYMFLA
Trigger: AGCAAGGAACATGTAATTGCAAACAGTGGCCAGTTT...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR GCA 90 bp CATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCAAGAGCATCAAATCTTaGCAAGTACTGAAGGTGGTA +
Preference number: 4 (lower is better)
Translates to: HVAPRPNFFHKLSSMLPAKSIKS*QVLKVV
Trigger: TACCACCTTCAGTACTTGGCAAGATTTGATGCTCTT...GGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp TCTGGAGTGACAAACTCCTTCAAGCACTCAATGGGACCCATAAGAAATGGGCAGCACTCAGGAACTTCATaGCATAGGGGCCCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: SGVTNSFKHSMGPIRNGQHSGTS*HRGPGV
Trigger: AACTCCTGGGCCCCTATGGCATGAAGTTCCTGAGTG...CTGCCCATTTCTTATGGGTCCCATTGAGTGCTTGAAGGAGTTTGTCACTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR GCA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCATGCAGCAACTTGTCTTaGTGTCCTCTTAAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQACSNLS*CPLKQF
Trigger: GAACTGCTTAAGAGGACAGCAAGACAAGTTGCTGCA...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGTTCTGTATGTTGACTaGAGTGGCAGATACACAAAC +
Preference number: 4 (lower is better)
Translates to: MWPHALTFSISCPPCSQPVLYVD*SGRYTN
Trigger: GTTTGTGTATCTGCCACTGCAGTCAACATACAGAAC...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp ATAAGGGACTTCCCACCCTCTGTCCATCTACCTTTAGCACACATCCCTTGGCTTCGGATGGATGTGATCTaGCTCCTACGGGAATGCTAT +
Preference number: 4 (lower is better)
Translates to: IRDFPPSVHLPLAHIPWLRMDVI*LLRECY
Trigger: ATAGCATTCCCGTAGGAGGCAGATCACATCCATCCG...AAGCCAAGGGATGTGTGCTAAAGGTAGATGGACAGAGGGTGGGAAGTCCCTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CCA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGGATATACTTGAGAGATaGTTCCATGGACTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRDILER*FHGLFQ
Trigger: CTGGAAAAGTCCATGGAACCATCTCTCAAGTATATC...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp TGTGTCTGCTGCAGGAGGGCGTTGCGGATGACTCTGGAAGCATCTGCACCCAAAGATATACTTGAGAGATaGTTCCATGGACTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: CVCCRRALRMTLEASAPKDILER*FHGLFQ
Trigger: CTGGAAAAGTCCATGGAACCATCTCTCAAGTATATC...TTTGGGTGCAGATGCTTCCAGAGTCATCCGCAACGCCCTCCTGCAGCAGACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CCA 90 bp CTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGCCATGCAGCATCTCATaGGCACAATTGTACATGCCA +
Preference number: 4 (lower is better)
Translates to: LPLWQGFRKVQRALQWVLPCSIS*AQLYMP
Trigger: TGGCATGTACAATTGTGCCCATGAGATGCTGCATGG...CAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp CTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGAGCTTCTTCAGAGGGTaGTCATACTCCAAGACCATC +
Preference number: 4 (lower is better)
Translates to: LPLWQGFRKVQRALQWVLSFFRG*SYSKTI
Trigger: GATGGTCTTGGAGTATGACCACCCTCTGAAGAAGCT...CAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp GAGGCAGTGTTTCTACTGTCCAAACAAAAGGGGGCACCTATGCAAGTATCTTGCCACAGCTTCTGGCACTaGCTATTGGAGTTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: EAVFLLSKQKGAPMQVSCHSFWH*LLELRH
Trigger: GTGCCTCAACTCCAATAGCCAGTGCCAGAAGCTGTG...GCAAGATACTTGCATAGGTGCCCCCTTTTGTTTGGACAGTAGAAACACTGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CCA 90 bp CATGAGTGCAGTGGACAAAGTGAGCACAAATCAGGGGGAAAGCAATGGCATAACCACAGCTTCTGGCACTaGCTATTGGAGTTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: HECSGQSEHKSGGKQWHNHSFWH*LLELRH
Trigger: GTGCCTCAACTCCAATAGCCAGTGCCAGAAGCTGTG...GTTATGCCATTGCTTTCCCCCTGATTTGTGCTCACTTTGTCCACTGCACTCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CCA 90 bp CATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCATTCCTCCAAGGTCATaGCAAACATCTTCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: HVAPRPNFFHKLSSMLPAIPPRS*QTSSQR
Trigger: TCTTTGAGAAGATGTTTGCCATGACCTTGGAGGAAT...GGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CCA 90 bp CCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGTCTGCACCCAAAAACTaGGCCAGTGACTGTATGAAA +
Preference number: 4 (lower is better)
Translates to: PQLPLWQGFRKVQRALQWSAPKN*ASDCMK
Trigger: TTTCATACAGTCACTGGCCCAGTTTTTGGGTGCAGA...CCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp TGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCATTTCTGCACCCAAAAACTaGGCCAGTGACTGTATGAAA +
Preference number: 4 (lower is better)
Translates to: WQGFRKVQRALQWVLAGISAPKN*ASDCMK
Trigger: TTTCATACAGTCACTGGCCCAGTTTTTGGGTGCAGA...AATGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CCA 90 bp GAGGCAGTGTTTCTACTGTCCAAACAAAAGGGGGCACCTATGCAAGTATCTTGCAGGGCAGCAGACACCTaGATGATGGCTTTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: EAVFLLSKQKGAPMQVSCRAADT*MMALVK
Trigger: CTTGACCAAAGCCATCATCCAGGTGTCTGCTGCCCT...GCAAGATACTTGCATAGGTGCCCCCTTTTGTTTGGACAGTAGAAACACTGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CCA 90 bp TCTGGAGTGACAAACTCCTTCAAGCACTCAATGGGACCCATAAGAAATGGGCAGCAAAGGGCTCTTCAGTaGGTACTGGCAGGCATTCAG +
Preference number: 4 (lower is better)
Translates to: SGVTNSFKHSMGPIRNGQQRALQ*VLAGIQ
Trigger: CTGAATGCCTGCCAGTACCCACTGAAGAGCCCTTTG...CTGCCCATTTCTTATGGGTCCCATTGAGTGCTTGAAGGAGTTTGTCACTCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CCA 90 bp CTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGAGAGAAATCCCTTCCTaGAGCAACAGCTATACCCAG +
Preference number: 4 (lower is better)
Translates to: LPLWQGFRKVQRALQWVLREIPS*SNSYTQ
Trigger: CTGGGTATAGCTGTTGCTCCAGGAAGGGATTTCTCT...CAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CCA 90 bp CCCATTCCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAACTGAACATCAGACTTaGGTCCCAGTTCTAGTTCTA +
Preference number: 4 (lower is better)
Translates to: PIPTPCESDHSFHYGKGLTEHQT*VPVLVL
Trigger: TAGAACTAGAACTGGGACCCAAGTCTGATGTTCAGT...TAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CCA 90 bp ATAAGGGACTTCCCACCCTCTGTCCATCTACCTTTAGCACACATCCCTTGGCTTGTTCTAAATACTGAGTaGAGGCTCCTCCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: IRDFPPSVHLPLAHIPWLVLNTE*RLLLSQ
Trigger: CTGGGAGAGGAGGAGCCTCCACTCAGTATTTAGAAC...AAGCCAAGGGATGTGTGCTAAAGGTAGATGGACAGAGGGTGGGAAGTCCCTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR CAA 72 bp AACTGGGCCAGTGACTGTATGAAACCAATGTATGCTTaGACTCCTGCCAACAGCTCAGAAGGCCGTACGATC +
Preference number: 4 (lower is better)
Translates to: NWASDCMKPMYA*TPANSSEGRTI
Trigger: GATCGTACGGCCTTCTGAGCTGTTGGCAGGAGTCAAAGCATACATTGGTTTCATACAGTCACTGGCCCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGAGAAGTTCATATACATaGTCCCGAAATTCCATGACA +
Preference number: 4 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRRSSYT*SRNSMT
Trigger: TGTCATGGAATTTCGGGATCATGTATATGAACTTCT...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp CATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCAGGCATCAATGGTGTTaGGAAGTTCATATACATGAT +
Preference number: 4 (lower is better)
Translates to: HVAPRPNFFHKLSSMLPARHQWC*EVHIHD
Trigger: ATCATGTATATGAACTTCTCAACACCATTGATGCCT...GGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR TCA 90 bp GCTCTTCAGTGGGTACTGGCAGGCATTCAGTTTAGGTGGAAGGCCCGAGACACCAGGCATCAATGGTGTTaGGAAGTTCATATACATGAT +
Preference number: 4 (lower is better)
Translates to: ALQWVLAGIQFRWKARDTRHQWC*EVHIHD
Trigger: ATCATGTATATGAACTTCTCAACACCATTGATGCCT...GGTGTCTCGGGCCTTCCACCTAAACTGAATGCCTGCCAGTACCCACTGAAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp CTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGCACACAGACAAGTTCTaGATGATGTCACTGAGCACA +
Preference number: 4 (lower is better)
Translates to: LPLWQGFRKVQRALQWVLHTDKF*MMSLST
Trigger: TGTGCTCAGTGACATCATTCAGAACTTGTCTGTGTG...CAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR TCA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCAAAGATACGAAGATaGAAGCAGAAAGTAGACAGA +
Preference number: 4 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRSKIRR*KQKVDR
Trigger: TCTGTCTACTTTCTGCTTTCATCTTCGTATCTTTGA...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp GATACTCAAGGTCACCTTGATGTCTGTGTCTGGAGTGACAAACTCCTTCAAGCAGCTTGTCCATGTTGGTaGCAATGCTGCGGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: DTQGHLDVCVWSDKLLQAACPCW*QCCGSS
Trigger: GGAAGAACCGCAGCATTGTCACCAACATGGACAAGC...TGCTTGAAGGAGTTTGTCACTCCAGACACAGACATCAAGGTGACCTTGAGTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp CTCTTCCCCCAACCGCGTGAGTGCATTTCAGCCATGTGCCAGCTTCTTCTCAAATTCCTCCTCAGGAGATaGAGTATCAGCTTTCAGATT +
Preference number: 4 (lower is better)
Translates to: LFPQPRECISAMCQLLLKFLLRR*SISFQI
Trigger: AATCTGAAAGCTGATACTTCATCTCCTGAGGAGGAA...TTTGAGAAGAAGCTGGCACATGGCTGAAATGCACTCACGCGGTTGGGGGAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp CACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTTCCTCCTCAGGAGATaGAGTATCAGCTTTCAGATT +
Preference number: 4 (lower is better)
Translates to: HSFHYGKGLGRSKGLFSGFLLRR*SISFQI
Trigger: AATCTGAAAGCTGATACTTCATCTCCTGAGGAGGAA...CCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp CTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGAGAAAAGGGCTAAGTTaGAACAGCTTGTACTCCCTC +
Preference number: 4 (lower is better)
Translates to: LPLWQGFRKVQRALQWVLRKGLS*NSLYSL
Trigger: GAGGGAGTACAAGCTGTTTCAACTTAGCCCTTTTCT...CAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp CCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGCTAGGCATTTTGTCTTaGTGGGTAGAGTTTAATGCC +
Preference number: 4 (lower is better)
Translates to: PQLPLWQGFRKVQRALQWLGILS*WVEFNA
Trigger: GGCATTAAACTCTACCCATCAAGACAAAATGCCTAG...CCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545638.2
CDS-3UTR TCA 90 bp CCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGCTTAGATTTGGGGTCTaGACAAGTCTAGGCATTTTG +
Preference number: 4 (lower is better)
Translates to: PQLPLWQGFRKVQRALQWLRFGV*TSLGIL
Trigger: CAAAATGCCTAGACTTGTTCAGACCCCAAATCTAAG...CCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545638.2
CDS-3UTR GCA 90 bp CATGAGTGCAGTGGACAAAGTGAGCACAAATCAGGGGGAAAGCAATGGCATAACGCTCTCCTTTATGTCTaGCACTCTCTTGCCATACCC +
Preference number: 4 (lower is better)
Translates to: HECSGQSEHKSGGKQWHNALLYV*HSLAIP
Trigger: GGGTATGGCAAGAGAGTGGCAGACATAAAGGAGAGC...GTTATGCCATTGCTTTCCCCCTGATTTGTGCTCACTTTGTCCACTGCACTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR GCA 90 bp CCCATTCCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTATATGAAACCAATGTATaGTTTGACTCCTGCCAACAG +
Preference number: 4 (lower is better)
Translates to: PIPTPCESDHSFHYGKGLYETNV*FDSCQQ
Trigger: CTGTTGGCAGGAGTCAAAGCATACATTGGTTTCATA...TAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp TCTGGAGTGACAAACTCCTTCAAGCACTCAATGGGACCCATAAGAAATGGGCAGGATGGTCCCACTGCTTaGCTGTCTAAGCAGACTTTC +
Preference number: 4 (lower is better)
Translates to: SGVTNSFKHSMGPIRNGQDGPTA*LSKQTF
Trigger: GAAAGTCTGCTTAGACAGGCAAGCAGTGGGACCATC...CTGCCCATTTCTTATGGGTCCCATTGAGTGCTTGAAGGAGTTTGTCACTCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR GCA 90 bp AGGGCGTTGCGGATGACTCTGGAAGCATCTGCACCCAAAAACTGGGCCAGTGACAACCATCCTTCTCAATaGTATAAAAGGAAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: RALRMTLEASAPKNWASDNHPSQ*YKRKKG
Trigger: ACCCTTCTTCCTTTTATAGCATTGAGAAGGATGGTT...GTCACTGGCCCAGTTTTTGGGTGCAGATGCTTCCAGAGTCATCCGCAACGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR GCA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTATCCCATTTCTACCTTaGTGCGTCTCTAAACAGATA +
Preference number: 4 (lower is better)
Translates to: MWPHALTFSISCPPCSQPIPFLP*CVSKQI
Trigger: TATCTGTTTAGAGACGCAGCAAGGTAGAAATGGGAT...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CCA 90 bp CACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGATATCAAAATGGCACTaGCAGGCATCAATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: HYGKGLGRSKGLFSGYWQISKWH*QASMVL
Trigger: CAACACCATTGATGCCTGCCAGTGCCATTTTGATAT...CTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp TGTGTAGAGTGTGGTGATTGTCTGTTCCCCACAGGAATCCAGTGGTTGTGTCTGCTCTTCAGTGGGTACTaGCAGGCATTCAGTTTAGGT +
Preference number: 4 (lower is better)
Translates to: CVECGDCLFPTGIQWLCLLFSGY*QAFSLG
Trigger: ACCTAAACTGAATGCCTGCCAGTACCCACTGAAGAG...CAGACACAACCACTGGATTCCTGTGGGGAACAGACAATCACCACACTCTACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CCA 90 bp CTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGACGATTTCTCAGCCCTaGATTGTTCTTCCACAGATC +
Preference number: 4 (lower is better)
Translates to: LPLWQGFRKVQRALQWVLTISQP*IVLPQI
Trigger: GATCTGTGGAAGAACAATCCAGGGCTGAGAAATCGT...CAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
3UTR CAA 72 bp AGCAGAGAAATGGATTCTCGATTTCTGGTTTTAAGCTaGTCAGTCTCCTGGCCCAGCTGCAAGAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: SREMDSRFLVLS*SVSWPSCKRLT
Trigger: TGTCAGCCTCTTGCAGCTGGGCCAGGAGACTGACAAGCTTAAAACCAGAAATCGAGAATCCATTTCTCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp CTCTTCCCCCAACCGCGTGAGTGCATTTCAGCCATGTGCCAGCTTCTTCTCAAAACAGGCCATTGTATCTaGATTAGCAGGGTTAATCAT +
Preference number: 4 (lower is better)
Translates to: LFPQPRECISAMCQLLLKTGHCI*ISRVNH
Trigger: ATGATTAACCCTGCTAATTCAGATACAATGGCCTGT...TTTGAGAAGAAGCTGGCACATGGCTGAAATGCACTCACGCGGTTGGGGGAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCAACAGGCCATTGTATCTaGATTAGCAGGGTTAATCAT +
Preference number: 4 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQATGHCI*ISRVNH
Trigger: ATGATTAACCCTGCTAATTCAGATACAATGGCCTGT...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp ATGAGTGCAGTGGACAAAGTGAGCACAAATCAGGGGGAAAGCAATGGCATAACGGTGTCTTTGTCTTGGTaGCATTCTCTGTGTGGCGAA +
Preference number: 4 (lower is better)
Translates to: MSAVDKVSTNQGESNGITVSLSW*HSLCGE
Trigger: TTCGCCACACAGAGAATGTCACCAAGACAAAGACAC...CGTTATGCCATTGCTTTCCCCCTGATTTGTGCTCACTTTGTCCACTGCACTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp GTTCGCCATGTTGACCAGGCTGGTCTTAACCTCCTTAGCTCAAGAGATCCACTGAATCTTGCCAAGTACTaGAGGTGGTATTGCTGTATC +
Preference number: 4 (lower is better)
Translates to: VRHVDQAGLNLLSSRDPLNLAKY*RWYCCI
Trigger: GATACAGCAATACCACCTTCAGTACTTGGCAAGATT...CAGTGGATCTCTTGAGCTAAGGAGGTTAAGACCAGCCTGGTCAACATGGCGAAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp TTGAGTCTGGCCTCCAGGTGGCTGCTGAGGTACTCAGAAGGGAAGATAGTATGTAATCTTGCCAAGTACTaGAGGTGGTATTGCTGTATC +
Preference number: 4 (lower is better)
Translates to: LSLASRWLLRYSEGKIVCNLAKY*RWYCCI
Trigger: GATACAGCAATACCACCTTCAGTACTTGGCAAGATT...ACATACTATCTTCCCTTCTGAGTACCTCAGCAGCCACCTGGAGGCCAGACTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp CACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGCATTATCAACTTGTTTaGGATTCAGAGAGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: HSFHYGKGLGRSKGLFSGHYQLV*DSERRG
Trigger: TCCTCTCCTCTCTGAATCTCAAACAAGTTGATAATG...CCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCAGAGAAACTGTATACATaGTTCATTGTCAGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQAEKLYT*FIVSAS
Trigger: ACTGGCACTGACAATGAATCATGTATACAGTTTCTC...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp GAGTTCTGCCAAGGCCCGCATCTCAGAGATGTCAGAGAACTCCTCTGCACTGAAGAGAAACTGTATACATaGTTCATTGTCAGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: EFCQGPHLRDVRELLCTEEKLYT*FIVSAS
Trigger: ACTGGCACTGACAATGAATCATGTATACAGTTTCTC...TTCAGTGCAGAGGAGTTCTCTGACATCTCTGAGATGCGGGCCTTGGCAGAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp GATACTCAAGGTCACCTTGATGTCTGTGTCTGGAGTGACAAACTCCTTCAAGCATTGTGTAGAGTGTGGTaGTTGTCTGTTCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: DTQGHLDVCVWSDKLLQALCRVW*LSVPHR
Trigger: CCTGTGGGGAACAGACAATCACCACACTCTACACAA...TGCTTGAAGGAGTTTGTCACTCCAGACACAGACATCAAGGTGACCTTGAGTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTAAGTTGGATCTGATCTaGACAAGTATGTCCATGTTT +
Preference number: 4 (lower is better)
Translates to: MWPHALTFSISCPPCSQPKLDLI*TSMSMF
Trigger: AAACATGGACATACTTGTTCAGATCAGATCCAACTT...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR TCA 90 bp CTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGCCACCAGAAATTCCTTaGGGTGAGTTTCAATGTTCT +
Preference number: 4 (lower is better)
Translates to: LPLWQGFRKVQRALQWVLPPEIP*GEFQCS
Trigger: AGAACATTGAAACTCACCTCAAGGAATTTCTGGTGG...CAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp CACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGCTGGGGAAGGAAATCTaGACAAGATCAGTAGATTAT +
Preference number: 4 (lower is better)
Translates to: HYGKGLGRSKGLFSGYWQLGKEI*TRSVDY
Trigger: ATAATCTACTGATCTTGTTCAGATTTCCTTCCCCAG...CTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp CTCTTCCCCCAACCGCGTGAGTGCATTTCAGCCATGTGCCAGCTTCTTCTCAAACAATTACATGTTCCTTaGTCTCCTTTATGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LFPQPRECISAMCQLLLKQLHVP*SPLCLP
Trigger: TGGCAGACATAAAGGAGAGCAAGGAACATGTAATTG...TTTGAGAAGAAGCTGGCACATGGCTGAAATGCACTCACGCGGTTGGGGGAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp CACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGCAATTACATGTTCCTTaGTCTCCTTTATGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: HSFHYGKGLGRSKGLFSGQLHVP*SPLCLP
Trigger: TGGCAGACATAAAGGAGAGCAAGGAACATGTAATTG...CCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR GCA 90 bp TGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCATTAAACTGGCCACTGTTTaGAATTACATGTTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: WQGFRKVQRALQWVLAGIKLATV*NYMFLA
Trigger: AGCAAGGAACATGTAATTGCAAACAGTGGCCAGTTT...AATGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR GCA 90 bp TGTGTAGAGTGTGGTGATTGTCTGTTCCCCACAGGAATCCAGTGGTTGTGTCTGAAAGTAGCTCTGCAATaGTCGAGTCAGCATAGTCCT +
Preference number: 4 (lower is better)
Translates to: CVECGDCLFPTGIQWLCLKVALQ*SSQHSP
Trigger: AGGACTATGCTGACTCGAGCATTGCAGAGCTACTTT...CAGACACAACCACTGGATTCCTGTGGGGAACAGACAATCACCACACTCTACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR GCA 90 bp CTCTTCCCCCAACCGCGTGAGTGCATTTCAGCCATGTGCCAGCTTCTTCTCAAAAAGAGCATCAAATCTTaGCAAGTACTGAAGGTGGTA +
Preference number: 4 (lower is better)
Translates to: LFPQPRECISAMCQLLLKKSIKS*QVLKVV
Trigger: TACCACCTTCAGTACTTGGCAAGATTTGATGCTCTT...TTTGAGAAGAAGCTGGCACATGGCTGAAATGCACTCACGCGGTTGGGGGAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp CCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGTATGAAACCAATGTATaGTTTGACTCCTGCCAACAG +
Preference number: 4 (lower is better)
Translates to: PQLPLWQGFRKVQRALQWYETNV*FDSCQQ
Trigger: CTGTTGGCAGGAGTCAAAGCATACATTGGTTTCATA...CCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR GCA 90 bp GAAGATAGTATGTTCAAACACGGAGAAACTGTATACATGATTCATTGTCAGTGCGGGGCCCAGGAGTTCTaGCAAGGCCCGCATCTCAGA +
Preference number: 4 (lower is better)
Translates to: EDSMFKHGETVYMIHCQCGAQEF*QGPHLR
Trigger: TCTGAGATGCGGGCCTTGGCAGAACTCCTGGGCCCC...GCACTGACAATGAATCATGTATACAGTTTCTCCGTGTTTGAACATACTATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR GCA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTAACCATCCTTCTCAATaGTATAAAAGGAAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: MWPHALTFSISCPPCSQPNHPSQ*YKRKKG
Trigger: ACCCTTCTTCCTTTTATAGCATTGAGAAGGATGGTT...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR GCA 90 bp GAGGCAGTGTTTCTACTGTCCAAACAAAAGGGGGCACCTATGCAAGTATCTTGCAGGGTTTCACTGTGTTaGCCAGAGTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: EAVFLLSKQKGAPMQVSCRVSLC*PEWSQT
Trigger: AGTTTGAGACCACTCTGGGCAACACAGTGAAACCCT...GCAAGATACTTGCATAGGTGCCCCCTTTTGTTTGGACAGTAGAAACACTGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CCA 90 bp CACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGGATATACTTGAGAGATaGTTCCATGGACTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: HSFHYGKGLGRSKGLFSGDILER*FHGLFQ
Trigger: CTGGAAAAGTCCATGGAACCATCTCTCAAGTATATC...CCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp CACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGAGATTGATATCAAAATaGCACTGGCAGGCATCAATG +
Preference number: 4 (lower is better)
Translates to: HYGKGLGRSKGLFSGYWQRLISK*HWQASM
Trigger: CATTGATGCCTGCCAGTGCCATTTTGATATCAATCT...CTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp CACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGATTCCTCCAAGGTCATaGCAAACATCTTCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: HYGKGLGRSKGLFSGYWQIPPRS*QTSSQR
Trigger: TCTTTGAGAAGATGTTTGCCATGACCTTGGAGGAAT...CTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CCA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCAGCCTTTTTCACTCTGTaGCTCCTTTCACTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQAAFFTL*LLSLSL
Trigger: TAAAGAAAGTGAAAGGAGCCACAGAGTGAAAAAGGC...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CCA 90 bp GTTCGCCATGTTGACCAGGCTGGTCTTAACCTCCTTAGCTCAAGAGATCCACTGAGAAAAGAAGTGAAATaGAAGGGCGAAGAAGCGGAT +
Preference number: 4 (lower is better)
Translates to: VRHVDQAGLNLLSSRDPLRKEVK*KGEEAD
Trigger: ATCCGCTTCTTCGCCCTTCCATTTCACTTCTTTTCT...CAGTGGATCTCTTGAGCTAAGGAGGTTAAGACCAGCCTGGTCAACATGGCGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CCA 90 bp TCTGGAGTGACAAACTCCTTCAAGCACTCAATGGGACCCATAAGAAATGGGCAGGATGGACTCCTCCTCTaGACACACAGACAAGTTCTA +
Preference number: 4 (lower is better)
Translates to: SGVTNSFKHSMGPIRNGQDGLLL*THRQVL
Trigger: TAGAACTTGTCTGTGTGTCCAGAGGAGGAGTCCATC...CTGCCCATTTCTTATGGGTCCCATTGAGTGCTTGAAGGAGTTTGTCACTCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCAAGAAGTTCATATACATaGTCCCGAAATTCCATGACA +
Preference number: 4 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQARSSYT*SRNSMT
Trigger: TGTCATGGAATTTCGGGATCATGTATATGAACTTCT...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp CACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGAGAAGTTCATATACATaGTCCCGAAATTCCATGACA +
Preference number: 4 (lower is better)
Translates to: HSFHYGKGLGRSKGLFSGRSSYT*SRNSMT
Trigger: TGTCATGGAATTTCGGGATCATGTATATGAACTTCT...CCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp CTCTTCCCCCAACCGCGTGAGTGCATTTCAGCCATGTGCCAGCTTCTTCTCAAAGTGACAGAAGTAAAATaGCTGAGGTGTAAGTTACAA +
Preference number: 4 (lower is better)
Translates to: LFPQPRECISAMCQLLLKVTEVK*LRCKLQ
Trigger: TTGTAACTTACACCTCAGTCATTTTACTTCTGTCAC...TTTGAGAAGAAGCTGGCACATGGCTGAAATGCACTCACGCGGTTGGGGGAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp CCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTGACAGAAGTAAAATaGCTGAGGTGTAAGTTACAA +
Preference number: 4 (lower is better)
Translates to: PQLPLWQGFRKVQRALQWVTEVK*LRCKLQ
Trigger: TTGTAACTTACACCTCAGTCATTTTACTTCTGTCAC...CCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp CACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGGTGACAGAAGTAAAATaGCTGAGGTGTAAGTTACAA +
Preference number: 4 (lower is better)
Translates to: HSFHYGKGLGRSKGLFSGVTEVK*LRCKLQ
Trigger: TTGTAACTTACACCTCAGTCATTTTACTTCTGTCAC...CCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp GATACTCAAGGTCACCTTGATGTCTGTGTCTGGAGTGACAAACTCCTTCAAGCAGAGTTGAGGCACCCATaGCAAAGAAGAAACCCAATG +
Preference number: 4 (lower is better)
Translates to: DTQGHLDVCVWSDKLLQAELRHP*QRRNPM
Trigger: CATTGGGTTTCTTCTTTGTCATGGGTGCCTCAACTC...TGCTTGAAGGAGTTTGTCACTCCAGACACAGACATCAAGGTGACCTTGAGTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp ATAAGGGACTTCCCACCCTCTGTCCATCTACCTTTAGCACACATCCCTTGGCTTGTCCAGCCTCAATCCTaGGAATTCAAATTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: IRDFPPSVHLPLAHIPWLVQPQS*EFKFFS
Trigger: GGAGAAAAATTTGAATTCTCAGGATTGAGGCTGGAC...AAGCCAAGGGATGTGTGCTAAAGGTAGATGGACAGAGGGTGGGAAGTCCCTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp CACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGAAGTTGGATCTGATCTaGACAAGTATGTCCATGTTT +
Preference number: 4 (lower is better)
Translates to: HSFHYGKGLGRSKGLFSGKLDLI*TSMSMF
Trigger: AAACATGGACATACTTGTTCAGATCAGATCCAACTT...CCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR TCA 90 bp ATAAGGGACTTCCCACCCTCTGTCCATCTACCTTTAGCACACATCCCTTGGCTTATCTGTTTTCTGACCTaGAATAGGAAAGCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: IRDFPPSVHLPLAHIPWLICFLT*NRKAFP
Trigger: AGGGAAGGCTTTCCTATTTCAGGTCAGAAAACAGAT...AAGCCAAGGGATGTGTGCTAAAGGTAGATGGACAGAGGGTGGGAAGTCCCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp ATAAGGGACTTCCCACCCTCTGTCCATCTACCTTTAGCACACATCCCTTGGCTTGTCCTAAATGTTGCGTaGTGTTTCGGACATCTATGT +
Preference number: 4 (lower is better)
Translates to: IRDFPPSVHLPLAHIPWLVLNVA*CFGHLC
Trigger: ACATAGATGTCCGAAACAGCACGCAACATTTAGGAC...AAGCCAAGGGATGTGTGCTAAAGGTAGATGGACAGAGGGTGGGAAGTCCCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp GATACTCAAGGTCACCTTGATGTCTGTGTCTGGAGTGACAAACTCCTTCAAGCAATTGTAGTGGCACAGTaGTTAGGTAGAAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: DTQGHLDVCVWSDKLLQAIVVAQ*LGRSCS
Trigger: CGAGCAGCTTCTACCTAAGCACTGTGCCACTACAAT...TGCTTGAAGGAGTTTGTCACTCCAGACACAGACATCAAGGTGACCTTGAGTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR GCA 90 bp GAGGCAGTGTTTCTACTGTCCAAACAAAAGGGGGCACCTATGCAAGTATCTTGCAGTTCTATATGCAGATaGAGATGGAGGAGGGATCTC +
Preference number: 4 (lower is better)
Translates to: EAVFLLSKQKGAPMQVSCSSICR*RWRRDL
Trigger: GAGATCCCTCCTCCATCTGCATCTGCATATAGAACT...GCAAGATACTTGCATAGGTGCCCCCTTTTGTTTGGACAGTAGAAACACTGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CCA 90 bp TTTTTCTACGGAGTCCAGCATTCGGGAGTGGAAGACAATGAGGTTCATCACCTTCCATGCAGCATCTCATaGGCACAATTGTACATGCCA +
Preference number: 4 (lower is better)
Translates to: FFYGVQHSGVEDNEVHHLPCSIS*AQLYMP
Trigger: TGGCATGTACAATTGTGCCCATGAGATGCTGCATGG...AAGGTGATGAACCTCATTGTCTTCCACTCCCGAATGCTGGACTCCGTAGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CCA 90 bp GAGAGGTCACATGCCACATCAGGTTTTCACTCAGGAACTTCATGCCATAGGGGCATTCCTCCAAGGTCATaGCAAACATCTTCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: ERSHATSGFHSGTSCHRGIPPRS*QTSSQR
Trigger: TCTTTGAGAAGATGTTTGCCATGACCTTGGAGGAAT...GCCCCTATGGCATGAAGTTCCTGAGTGAAAACCTGATGTGGCATGTGACCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CCA 90 bp GAAGATAGTATGTTCAAACACGGAGAAACTGTATACATGATTCATTGTCAGTGCCGATCTCCTGGGTCGTaGCATTGTAGCCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: EDSMFKHGETVYMIHCQCRSPGS*HCSQPA
Trigger: GGCTGGCTGGCTACAATGCCACGACCCAGGAGATCG...GCACTGACAATGAATCATGTATACAGTTTCTCCGTGTTTGAACATACTATCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR CAA 72 bp TACTTCTCTGTCCCTTCACCTCTGGACATTCACTTTTaGCTTCCGGTAGTAAAGGCCATCATGTCCTCACCT +
Preference number: 4 (lower is better)
Translates to: YFSVPSPLDIHF*LPVVKAIMSSP
Trigger: AGGTGAGGACATGATGGCCTTTACTACCGGAAGCAAAAAGTGAATGTCCAGAGGTGAAGGGACAGAGAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp GTTCGCCATGTTGACCAGGCTGGTCTTAACCTCCTTAGCTCAAGAGATCCACTGAGGCATCAATGGTGTTaGGAAGTTCATATACATGAT +
Preference number: 4 (lower is better)
Translates to: VRHVDQAGLNLLSSRDPLRHQWC*EVHIHD
Trigger: ATCATGTATATGAACTTCTCAACACCATTGATGCCT...CAGTGGATCTCTTGAGCTAAGGAGGTTAAGACCAGCCTGGTCAACATGGCGAAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp TCTGGAGTGACAAACTCCTTCAAGCACTCAATGGGACCCATAAGAAATGGGCAGGTCCAGCCTCAATCCTaGGAATTCAAATTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: SGVTNSFKHSMGPIRNGQVQPQS*EFKFFS
Trigger: GGAGAAAAATTTGAATTCTCAGGATTGAGGCTGGAC...CTGCCCATTTCTTATGGGTCCCATTGAGTGCTTGAAGGAGTTTGTCACTCCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp GTTCGCCATGTTGACCAGGCTGGTCTTAACCTCCTTAGCTCAAGAGATCCACTGTCAAAGATACGAAGATaGAAGCAGAAAGTAGACAGA +
Preference number: 4 (lower is better)
Translates to: VRHVDQAGLNLLSSRDPLSKIRR*KQKVDR
Trigger: TCTGTCTACTTTCTGCTTTCATCTTCGTATCTTTGA...CAGTGGATCTCTTGAGCTAAGGAGGTTAAGACCAGCCTGGTCAACATGGCGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp TCTGGAGTGACAAACTCCTTCAAGCACTCAATGGGACCCATAAGAAATGGGCAGGTCCTAAATGTTGCGTaGTGTTTCGGACATCTATGT +
Preference number: 4 (lower is better)
Translates to: SGVTNSFKHSMGPIRNGQVLNVA*CFGHLC
Trigger: ACATAGATGTCCGAAACAGCACGCAACATTTAGGAC...CTGCCCATTTCTTATGGGTCCCATTGAGTGCTTGAAGGAGTTTGTCACTCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR GCA 90 bp GAGGCAGTGTTTCTACTGTCCAAACAAAAGGGGGCACCTATGCAAGTATCTTGCTTAAGCAGTTCTATATaGAGATGCAGATGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: EAVFLLSKQKGAPMQVSCLSSSI*RCRWRR
Trigger: CCTCCTCCATCTGCATCTGCATATAGAACTGCTTAA...GCAAGATACTTGCATAGGTGCCCCCTTTTGTTTGGACAGTAGAAACACTGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp ATAAGGGACTTCCCACCCTCTGTCCATCTACCTTTAGCACACATCCCTTGGCTTGCTACCTTGCAGAATTaGTATAAGGATGTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: IRDFPPSVHLPLAHIPWLATLQN*YKDVKA
Trigger: TGCTTTCACATCCTTATAGCAATTCTGCAAGGTAGC...AAGCCAAGGGATGTGTGCTAAAGGTAGATGGACAGAGGGTGGGAAGTCCCTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CCA 90 bp GTTCGCCATGTTGACCAGGCTGGTCTTAACCTCCTTAGCTCAAGAGATCCACTGGAACATAAGCAAAACTaGGGAAGGAAATCTGAACAA +
Preference number: 4 (lower is better)
Translates to: VRHVDQAGLNLLSSRDPLEHKQN*GRKSEQ
Trigger: TTGTTCAGATTTCCTTCCCCAGTTTTGCTTATGTTC...CAGTGGATCTCTTGAGCTAAGGAGGTTAAGACCAGCCTGGTCAACATGGCGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp GAGGCAGTGTTTCTACTGTCCAAACAAAAGGGGGCACCTATGCAAGTATCTTGCGAGAAACTGTATACATaGTTCATTGTCAGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: EAVFLLSKQKGAPMQVSCEKLYT*FIVSAS
Trigger: ACTGGCACTGACAATGAATCATGTATACAGTTTCTC...GCAAGATACTTGCATAGGTGCCCCCTTTTGTTTGGACAGTAGAAACACTGCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp GAGGCAGTGTTTCTACTGTCCAAACAAAAGGGGGCACCTATGCAAGTATCTTGCATACTTGTTCCACTCTaGGGCTCAAAAGACAACTAT +
Preference number: 4 (lower is better)
Translates to: EAVFLLSKQKGAPMQVSCILVPL*GSKDNY
Trigger: ATAGTTGTCTTTTGAGCCTCAGAGTGGAACAAGTAT...GCAAGATACTTGCATAGGTGCCCCCTTTTGTTTGGACAGTAGAAACACTGCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp AGAAGGGAAGATAGTATGTTCAAACACGGAGAAACTGTATACATGATTCATTGTTTAGAAGTTGGGCACTaGGCCACTGCTCAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: RREDSMFKHGETVYMIHCLEVGH*ATAQPP
Trigger: AGGGGGCTGAGCAGTGGCGCAGTGCCCAACTTCTAA...ACAATGAATCATGTATACAGTTTCTCCGTGTTTGAACATACTATCTTCCCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR GCA 90 bp GAGGCAGTGTTTCTACTGTCCAAACAAAAGGGGGCACCTATGCAAGTATCTTGCAAACTGGCCACTGTTTaGAATTACATGTTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: EAVFLLSKQKGAPMQVSCKLATV*NYMFLA
Trigger: AGCAAGGAACATGTAATTGCAAACAGTGGCCAGTTT...GCAAGATACTTGCATAGGTGCCCCCTTTTGTTTGGACAGTAGAAACACTGCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CCA 90 bp GAAGATAGTATGTTCAAACACGGAGAAACTGTATACATGATTCATTGTCAGTGCAGTCTGGCCTCCAGGTaGCTGCTGAGGTACTCAGAA +
Preference number: 4 (lower is better)
Translates to: EDSMFKHGETVYMIHCQCSLASR*LLRYSE
Trigger: TTCTGAGTACCTCAGCAGCCACCTGGAGGCCAGACT...GCACTGACAATGAATCATGTATACAGTTTCTCCGTGTTTGAACATACTATCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CCA 90 bp CTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGTAAGACAAAACAATTaGGGTGAGATTTCTGATATC +
Preference number: 4 (lower is better)
Translates to: LPLWQGFRKVQRALQWVLVRQNN*GEISDI
Trigger: GATATCAGAAATCTCACCCCAATTGTTTTGTCTTAC...CAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp GATACTCAAGGTCACCTTGATGTCTGTGTCTGGAGTGACAAACTCCTTCAAGCACATTATCAACTTGTTTaGGATTCAGAGAGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: DTQGHLDVCVWSDKLLQAHYQLV*DSERRG
Trigger: TCCTCTCCTCTCTGAATCTCAAACAAGTTGATAATG...TGCTTGAAGGAGTTTGTCACTCCAGACACAGACATCAAGGTGACCTTGAGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp GACAAAGTGAGCACAAATCAGGGGGAAAGCAATGGCATAACGCAACATGGCAGAAAGTTGGATCTGATCTaGACAAGTATGTCCATGTTT +
Preference number: 4 (lower is better)
Translates to: DKVSTNQGESNGITQHGRKLDLI*TSMSMF
Trigger: AAACATGGACATACTTGTTCAGATCAGATCCAACTT...TCTGCCATGTTGCGTTATGCCATTGCTTTCCCCCTGATTTGTGCTCACTTTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR GCA 90 bp TTTTTCTACGGAGTCCAGCATTCGGGAGTGGAAGACAATGAGGTTCATCACCTTTATGAAACCAATGTATaGTTTGACTCCTGCCAACAG +
Preference number: 4 (lower is better)
Translates to: FFYGVQHSGVEDNEVHHLYETNV*FDSCQQ
Trigger: CTGTTGGCAGGAGTCAAAGCATACATTGGTTTCATA...AAGGTGATGAACCTCATTGTCTTCCACTCCCGAATGCTGGACTCCGTAGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR GCA 90 bp GAGGCAGTGTTTCTACTGTCCAAACAAAAGGGGGCACCTATGCAAGTATCTTGCAACCATCCTTCTCAATaGTATAAAAGGAAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: EAVFLLSKQKGAPMQVSCNHPSQ*YKRKKG
Trigger: ACCCTTCTTCCTTTTATAGCATTGAGAAGGATGGTT...GCAAGATACTTGCATAGGTGCCCCCTTTTGTTTGGACAGTAGAAACACTGCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR GCA 90 bp GAGGCAGTGTTTCTACTGTCCAAACAAAAGGGGGCACCTATGCAAGTATCTTGCATTCCATCTCATTGCTaGAAGCAAGTTAATGGAGAT +
Preference number: 4 (lower is better)
Translates to: EAVFLLSKQKGAPMQVSCIPSHC*KQVNGD
Trigger: ATCTCCATTAACTTGCTTGCAGCAATGAGATGGAAT...GCAAGATACTTGCATAGGTGCCCCCTTTTGTTTGGACAGTAGAAACACTGCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CCA 90 bp AGAAGGGAAGATAGTATGTTCAAACACGGAGAAACTGTATACATGATTCATTGTCCCACAGGAATCCAGTaGTTGTGTCTGCTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: RREDSMFKHGETVYMIHCPTGIQ*LCLLQE
Trigger: CTCCTGCAGCAGACACAACCACTGGATTCCTGTGGG...ACAATGAATCATGTATACAGTTTCTCCGTGTTTGAACATACTATCTTCCCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CCA 90 bp GAAGATAGTATGTTCAAACACGGAGAAACTGTATACATGATTCATTGTCAGTGCAGGGCAGCAGACACCTaGATGATGGCTTTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: EDSMFKHGETVYMIHCQCRAADT*MMALVK
Trigger: CTTGACCAAAGCCATCATCCAGGTGTCTGCTGCCCT...GCACTGACAATGAATCATGTATACAGTTTCTCCGTGTTTGAACATACTATCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR CAA 72 bp AGCTATCAAATAGGCTTCAGGAAGGCTGAATCGTTTTaGCTGAAAACCGACAACTGCTTCCCTTTCATCATG +
Preference number: 4 (lower is better)
Translates to: SYQIGFRKAESF*LKTDNCFPFIM
Trigger: CATGATGAAAGGGAAGCAGTTGTCGGTTTTCAGCAAAAACGATTCAGCCTTCCTGAAGCCTATTTGATAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp GTACTCAGAAGGGAAGATAGTATGTTCAAACACGGAGAAACTGTATACATGATTGGGAGTGGAAGACAATaGGGTTCATCACCTTGGCTA +
Preference number: 4 (lower is better)
Translates to: VLRREDSMFKHGETVYMIGSGRQ*GSSPWL
Trigger: TAGCCAAGGTGATGAACCTCATTGTCTTCCACTCCC...AATCATGTATACAGTTTCTCCGTGTTTGAACATACTATCTTCCCTTCTGAGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR GCA 90 bp AGAAGGGAAGATAGTATGTTCAAACACGGAGAAACTGTATACATGATTCATTGTTCCTCGGTGACTTTGTaGACCTGCAGCACATCCTCA +
Preference number: 4 (lower is better)
Translates to: RREDSMFKHGETVYMIHCSSVTL*TCSTSS
Trigger: TGAGGATGTGCTGCAGGTGCACAAAGTCACCGAGGA...ACAATGAATCATGTATACAGTTTCTCCGTGTTTGAACATACTATCTTCCCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR GCA 90 bp AGAAGGGAAGATAGTATGTTCAAACACGGAGAAACTGTATACATGATTCATTGTGTATGCTTTGACTCCTaGCAACAGCTCAGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: RREDSMFKHGETVYMIHCVCFDS*QQLRRP
Trigger: CGGCCTTCTGAGCTGTTGGCAGGAGTCAAAGCATAC...ACAATGAATCATGTATACAGTTTCTCCGTGTTTGAACATACTATCTTCCCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR CAA 72 bp TGGGGTGAGATTTCTGATATCCATTCTTTAGTTCCTTaGGGCCTAAGTAAAGCAAACTTACAACCTGGGACA +
Preference number: 4 (lower is better)
Translates to: WGEISDIHSLVP*GLSKANLQPGT
Trigger: TGTCCCAGGTTGTAAGTTTGCTTTACTTAGGCCCAAAGGAACTAAAGAATGGATATCAGAAATCTCACCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
3UTR CAA 72 bp TATGTTCAAACACGGAGAAACTGTATACATGATTCATaGTCAGTGCCAGTTCTGTCAAGTTTAGGTGTAGCT +
Preference number: 4 (lower is better)
Translates to: YVQTRRNCIHDS*SVPVLSSLGVA
Trigger: AGCTACACCTAAACTTGACAGAACTGGCACTGACAATGAATCATGTATACAGTTTCTCCGTGTTTGAACATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR TCA 90 bp AGAAGGGAAGATAGTATGTTCAAACACGGAGAAACTGTATACATGATTCATTGTCCACCAGAAATTCCTTaGGGTGAGTTTCAATGTTCT +
Preference number: 4 (lower is better)
Translates to: RREDSMFKHGETVYMIHCPPEIP*GEFQCS
Trigger: AGAACATTGAAACTCACCTCAAGGAATTTCTGGTGG...ACAATGAATCATGTATACAGTTTCTCCGTGTTTGAACATACTATCTTCCCTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
3UTR CAA 72 bp AAGATCAGTAGATTATATCAATGTCAGTTATCCTGGTaGTGGCAGTGTACTACAGTTTTGCTAGATGTTAGC +
Preference number: 4 (lower is better)
Translates to: KISRLYQCQLSW*WQCTTVLLDVS
Trigger: GCTAACATCTAGCAAAACTGTAGTACACTGCCACAACCAGGATAACTGACATTGATATAATCTACTGATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR TCA 90 bp AGAAGGGAAGATAGTATGTTCAAACACGGAGAAACTGTATACATGATTCATTGTACAGGCCATTGTATCTaGATTAGCAGGGTTAATCAT +
Preference number: 4 (lower is better)
Translates to: RREDSMFKHGETVYMIHCTGHCI*ISRVNH
Trigger: ATGATTAACCCTGCTAATTCAGATACAATGGCCTGT...ACAATGAATCATGTATACAGTTTCTCCGTGTTTGAACATACTATCTTCCCTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CAA 90 bp GCCGTACGATCTCCTGGGTCGTGGCATTGTAGCCAGCCAGCCACACAATGGCTCATCTCCAGGACGCAATaGCTGGTCTGCTTGGCCAAC +
Preference number: 5 (lower is better)
Translates to: AVRSPGSWHCSQPATQWLISRTQ*LVCLAN
Trigger: GTTGGCCAAGCAGACCAGCAATTGCGTCCTGGAGAT...GAGCCATTGTGTGGCTGGCTGGCTACAATGCCACGACCCAGGAGATCGTACGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CAA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGCTCCCGAAGTCCCTCTaGGGCCATGGCCCTGAAACT +
Preference number: 5 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRLPKSL*GHGPET
Trigger: AGTTTCAGGGCCATGGCCCAAGAGGGACTTCGGGAG...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CAA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGAGGTCCTCGGTGACTTaGTGCACCTGCAGCACATCC +
Preference number: 5 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRRSSVT*CTCSTS
Trigger: GGATGTGCTGCAGGTGCACAAAGTCACCGAGGACCT...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CAA 90 bp CATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCAGGTCCTCGGTGACTTaGTGCACCTGCAGCACATCC +
Preference number: 5 (lower is better)
Translates to: HVAPRPNFFHKLSSMLPARSSVT*CTCSTS
Trigger: GGATGTGCTGCAGGTGCACAAAGTCACCGAGGACCT...GGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CAA 90 bp CACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGCTCTCAGCTCCTGGCTaGTCCCTCTCGGGCTCTCCT +
Preference number: 5 (lower is better)
Translates to: HYGKGLGRSKGLFSGYWQLSAPG*SLSGSP
Trigger: AGGAGAGCCCGAGAGGGACAAGCCAGGAGCTGAGAG...CTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CAA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCACTCTCAGCTCCTGGCTaGTCCCTCTCGGGCTCTCCT +
Preference number: 5 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQALSAPG*SLSGSP
Trigger: AGGAGAGCCCGAGAGGGACAAGCCAGGAGCTGAGAG...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CAA 90 bp GGTGGAAGGCCCGAGACACCTCCCGATAGGCATTTCGAAGCAGGACATAAGGGACACACAATGGCTCTGTaGAGTCTGGCCTCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: GGRPETPPDRHFEAGHKGHTMAL*SLASRW
Trigger: CCACCTGGAGGCCAGACTCAACAGAGCCATTGTGTG...TCCCTTATGTCCTGCTTCGAAATGCCTATCGGGAGGTGTCTCGGGCCTTCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CAA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTTGCTGCAGGAGGGCGTaGCGGATGACTCTGGAAGCA +
Preference number: 5 (lower is better)
Translates to: MWPHALTFSISCPPCSQPCCRRA*RMTLEA
Trigger: TGCTTCCAGAGTCATCCGCAACGCCCTCCTGCAGCA...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CAA 90 bp AGGACGCAATTGCTGGTCTGCTTGGCCAACTCTTCCAGGAAGGAGTTGCAGTGGTGCTGCAGGAGGGCGTaGCGGATGACTCTGGAAGCA +
Preference number: 5 (lower is better)
Translates to: RTQLLVCLANSSRKELQWCCRRA*RMTLEA
Trigger: TGCTTCCAGAGTCATCCGCAACGCCCTCCTGCAGCA...CCACTGCAACTCCTTCCTGGAAGAGTTGGCCAAGCAGACCAGCAATTGCGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CAA 90 bp CTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGCAGGGCATCATCCCCTaGGCCAGGCCCTGGACCTTC +
Preference number: 5 (lower is better)
Translates to: LPLWQGFRKVQRALQWVLQGIIP*ARPWTF
Trigger: GAAGGTCCAGGGCCTGGCCAAGGGGATGATGCCCTG...CAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CAA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCCTCCACTCACAGCCTTaGTGTGAGGCCCAAACTCTT +
Preference number: 5 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACLHSQP*CEAQTL
Trigger: AAGAGTTTGGGCCTCACACAAAGGCTGTGAGTGGAG...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CAA 90 bp AGGACGCAATTGCTGGTCTGCTTGGCCAACTCTTCCAGGAAGGAGTTGCAGTGGACAGGAATCCAGTGGTaGTGTCTGCTGCAGGAGGGC +
Preference number: 5 (lower is better)
Translates to: RTQLLVCLANSSRKELQWTGIQW*CLLQEG
Trigger: GCCCTCCTGCAGCAGACACAACCACTGGATTCCTGT...CCACTGCAACTCCTTCCTGGAAGAGTTGGCCAAGCAGACCAGCAATTGCGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CAA 90 bp CACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGCTCCCGAAGTCCCTCTaGGGCCATGGCCCTGAAACT +
Preference number: 5 (lower is better)
Translates to: HYGKGLGRSKGLFSGYWQLPKSL*GHGPET
Trigger: AGTTTCAGGGCCATGGCCCAAGAGGGACTTCGGGAG...CTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CAA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGACGGAGTTCGCCATGTaGACCAGGCTGGTCTTAACC +
Preference number: 5 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRTEFAM*TRLVLT
Trigger: GGTTAAGACCAGCCTGGTCAACATGGCGAACTCCGT...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CAA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGAAGGTTAAGGAAGCCTaGTCCCTAGCTGGGGGACAC +
Preference number: 5 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRKVKEA*SLAGGH
Trigger: GTGTCCCCCAGCTAGGGACAAGGCTTCCTTAACCTT...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CAA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCCAGAAATTGCCGCCGTaGACAATGAAACTGGCCACT +
Preference number: 5 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACQKLPP*TMKLAT
Trigger: AGTGGCCAGTTTCATTGTCAACGGCGGCAATTTCTG...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CAA 90 bp CCCATTCCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAATCTCCAGGACGCAATaGCTGGTCTGCTTGGCCAAC +
Preference number: 5 (lower is better)
Translates to: PIPTPCESDHSFHYGKGLISRTQ*LVCLAN
Trigger: GTTGGCCAAGCAGACCAGCAATTGCGTCCTGGAGAT...TAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CAA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCACACACAATGGCTCTGTaGAGTCTGGCCTCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQAHTMAL*SLASRW
Trigger: CCACCTGGAGGCCAGACTCAACAGAGCCATTGTGTG...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CAA 90 bp CACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGACAGGAATCCAGTGGTaGTGTCTGCTGCAGGAGGGC +
Preference number: 5 (lower is better)
Translates to: HSFHYGKGLGRSKGLFSGTGIQW*CLLQEG
Trigger: GCCCTCCTGCAGCAGACACAACCACTGGATTCCTGT...CCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CAA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCCCCTGCAGCAACTaGTCTTGCTGTCCTCTTAAG +
Preference number: 5 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRSPCSN*SCCPLK
Trigger: CTTAAGAGGACAGCAAGACAAGTTGCTGCAGGGGGA...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CAA 90 bp CCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGCACCTGCCAACTGGATaGAACACCATGGCAGGGGAG +
Preference number: 5 (lower is better)
Translates to: PQLPLWQGFRKVQRALQWHLPTG*NTMAGE
Trigger: CTCCCCTGCCATGGTGTTCAATCCAGTTGGCAGGTG...CCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CAA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGCAGGGTTTCACTGTGTaGCCCAGAGTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRQGFTV*PRVVSN
Trigger: GTTTGAGACCACTCTGGGCAACACAGTGAAACCCTG...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CAA 90 bp CATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTTTAGCACACATCCCTaGGCTTTTCCCCAGACCCAG +
Preference number: 5 (lower is better)
Translates to: HVAPRPNFFHKLSSMLPAFSTHP*AFPQTQ
Trigger: CTGGGTCTGGGGAAAAGCCAAGGGATGTGTGCTAAA...GGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS TCA 90 bp TCTTCTGTCAGCTTCTTCAGAGGGTGGTCATACTCCAAGACCATCTaGCCCAGACGGGCAAAACTGGGGTCACCATGCCCATGCAGCATC +
Preference number: 5 (lower is better)
Translates to: SSVSFFRGWSYSKTI*PRRAKLGSPCPCSI
Trigger: GATGCTGCATGGGCATGGTGACCCCAGTTTTGCCCGTCTGGGTCAGATGGTCTTGGAGTATGACCACCCTCTGAAGAAGCTGACAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS GCA 90 bp ACAATGAGGTTCATCACCTTGGCTAAGTCAGGGTTCTCATGCAGGTaGAGAGGGGCCTTAGCCACGCTAGTGTATGCCTGCGGTTGGAGT +
Preference number: 5 (lower is better)
Translates to: TMRFITLAKSGFSCR*RGALATLVYACGWS
Trigger: ACTCCAACCGCAGGCATACACTAGCGTGGCTAAGGCCCCTCTGCACCTGCATGAGAACCCTGACTTAGCCAAGGTGATGAACCTCATTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549451.1
CDS GCA 90 bp TGGAAGACAATGAGGTTCATCACCTTGGCTAAGTCAGGGTTCTCATaGAGGTGCAGAGGGGCCTTAGCCACGCTAGTGTATGCCTGCGGT +
Preference number: 5 (lower is better)
Translates to: WKTMRFITLAKSGFS*RCRGALATLVYACG
Trigger: ACCGCAGGCATACACTAGCGTGGCTAAGGCCCCTCTGCACCTGCATGAGAACCCTGACTTAGCCAAGGTGATGAACCTCATTGTCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549451.1
CDS-3UTR CAA 90 bp CTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGAGGTCCTCGGTGACTTaGTGCACCTGCAGCACATCC +
Preference number: 5 (lower is better)
Translates to: LPLWQGFRKVQRALQWVLRSSVT*CTCSTS
Trigger: GGATGTGCTGCAGGTGCACAAAGTCACCGAGGACCT...CAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CAA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTGCCATCCGCAGAAATaGCCGCCGTTGACAATGAAA +
Preference number: 5 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRCHPQK*PPLTMK
Trigger: TTTCATTGTCAACGGCGGCAATTTCTGCGGATGGCA...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CAA 90 bp GGTGGAAGGCCCGAGACACCTCCCGATAGGCATTTCGAAGCAGGACATAAGGGATGCCATCCGCAGAAATaGCCGCCGTTGACAATGAAA +
Preference number: 5 (lower is better)
Translates to: GGRPETPPDRHFEAGHKGCHPQK*PPLTMK
Trigger: TTTCATTGTCAACGGCGGCAATTTCTGCGGATGGCA...TCCCTTATGTCCTGCTTCGAAATGCCTATCGGGAGGTGTCTCGGGCCTTCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CAA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCTCAGGTGTCTTTGTCTaGGTGACATTCTCTGTGTGG +
Preference number: 5 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACSGVFV*VTFSVW
Trigger: CCACACAGAGAATGTCACCAAGACAAAGACACCTGA...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CAA 90 bp CATGAGTGCAGTGGACAAAGTGAGCACAAATCAGGGGGAAAGCAATGGCATAACCTCTCAGCTCCTGGCTaGTCCCTCTCGGGCTCTCCT +
Preference number: 5 (lower is better)
Translates to: HECSGQSEHKSGGKQWHNLSAPG*SLSGSP
Trigger: AGGAGAGCCCGAGAGGGACAAGCCAGGAGCTGAGAG...GTTATGCCATTGCTTTCCCCCTGATTTGTGCTCACTTTGTCCACTGCACTCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CAA 90 bp CTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGACAGGAATCCAGTGGTaGTGTCTGCTGCAGGAGGGC +
Preference number: 5 (lower is better)
Translates to: LPLWQGFRKVQRALQWVLTGIQW*CLLQEG
Trigger: GCCCTCCTGCAGCAGACACAACCACTGGATTCCTGT...CAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CAA 90 bp CATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTTTCTGGTTTTAAGCTaGTCAGTCTCCTGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: HVAPRPNFFHKLSSMLPAFLVLS*SVSWPS
Trigger: GCTGGGCCAGGAGACTGACAAGCTTAAAACCAGAAA...GGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CAA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCAAGGAAGGAGGATTaGCTGATGCACGAAGCAGGA +
Preference number: 5 (lower is better)
Translates to: MWPHALTFSISCPPCSQPARKED*LMHEAG
Trigger: TCCTGCTTCGTGCATCAGCAAATCCTCCTTCCTTGC...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CAA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCAACCTATGCAAGTATCTaGCCCCAGGCCTTGTGGGAG +
Preference number: 5 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQATYASI*PQALWE
Trigger: CTCCCACAAGGCCTGGGGCAAGATACTTGCATAGGT...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CAA 90 bp CCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGCTCCACTCACAGCCTTaGTGTGAGGCCCAAACTCTT +
Preference number: 5 (lower is better)
Translates to: PQLPLWQGFRKVQRALQWLHSQP*CEAQTL
Trigger: AAGAGTTTGGGCCTCACACAAAGGCTGTGAGTGGAG...CCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CAA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGATGTCTGCCACTCTCTaGCCATACCCTTTCAAACTG +
Preference number: 5 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRMSATL*PYPFKL
Trigger: CAGTTTGAAAGGGTATGGCAAGAGAGTGGCAGACAT...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CAA 90 bp CCCATTCCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTACAGAAATTGCCGCCGTaGACAATGAAACTGGCCACT +
Preference number: 5 (lower is better)
Translates to: PIPTPCESDHSFHYGKGLQKLPP*TMKLAT
Trigger: AGTGGCCAGTTTCATTGTCAACGGCGGCAATTTCTG...TAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CAA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTTGCCATCCGCAGAAATaGCCGCCGTTGACAATGAAA +
Preference number: 5 (lower is better)
Translates to: MWPHALTFSISCPPCSQPCHPQK*PPLTMK
Trigger: TTTCATTGTCAACGGCGGCAATTTCTGCGGATGGCA...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CAA 90 bp CATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCATGAGGTTCATCACCTaGGCTAAGTCAGGGTTCTCA +
Preference number: 5 (lower is better)
Translates to: HVAPRPNFFHKLSSMLPAMRFIT*AKSGFS
Trigger: TGAGAACCCTGACTTAGCCAAGGTGATGAACCTCAT...GGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CAA 90 bp CTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGATCTCCAGGACGCAATaGCTGGTCTGCTTGGCCAAC +
Preference number: 5 (lower is better)
Translates to: LPLWQGFRKVQRALQWVLISRTQ*LVCLAN
Trigger: GTTGGCCAAGCAGACCAGCAATTGCGTCCTGGAGAT...CAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CAA 90 bp CCCATTCCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTATGTAGCTTGTCCATGTaGGTGACAATGCTGCGGTTC +
Preference number: 5 (lower is better)
Translates to: PIPTPCESDHSFHYGKGLCSLSM*VTMLRF
Trigger: GAACCGCAGCATTGTCACCAACATGGACAAGCTACA...TAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CAA 90 bp GAGGCAGTGTTTCTACTGTCCAAACAAAAGGGGGCACCTATGCAAGTATCTTGCTGCTGCAGGAGGGCGTaGCGGATGACTCTGGAAGCA +
Preference number: 5 (lower is better)
Translates to: EAVFLLSKQKGAPMQVSCCCRRA*RMTLEA
Trigger: TGCTTCCAGAGTCATCCGCAACGCCCTCCTGCAGCA...GCAAGATACTTGCATAGGTGCCCCCTTTTGTTTGGACAGTAGAAACACTGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CAA 90 bp CCCATTCCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGCCATCAAGTCCGGCTaGCTAAAGTTGGATCTGATC +
Preference number: 5 (lower is better)
Translates to: PIPTPCESDHSFHYGKGLAIKSG*LKLDLI
Trigger: GATCAGATCCAACTTTAGCAAGCCGGACTTGATGGC...TAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CAA 90 bp CCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGACCCTCTGCTCTGGGTaGTGGAGATATCAAAGCAGG +
Preference number: 5 (lower is better)
Translates to: PQLPLWQGFRKVQRALQWTLCSG*WRYQSR
Trigger: CCTGCTTTGATATCTCCACAACCCAGAGCAGAGGGT...CCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CAA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGGAAACTGGCCACTGTTaGCAATTACATGTTCCTTGC +
Preference number: 5 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRETGHC*QLHVPC
Trigger: GCAAGGAACATGTAATTGCAAACAGTGGCCAGTTTC...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CAA 90 bp GGTGGAAGGCCCGAGACACCTCCCGATAGGCATTTCGAAGCAGGACATAAGGGAGAAACTGGCCACTGTTaGCAATTACATGTTCCTTGC +
Preference number: 5 (lower is better)
Translates to: GGRPETPPDRHFEAGHKGETGHC*QLHVPC
Trigger: GCAAGGAACATGTAATTGCAAACAGTGGCCAGTTTC...TCCCTTATGTCCTGCTTCGAAATGCCTATCGGGAGGTGTCTCGGGCCTTCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CAA 90 bp ACAGATCTCCAGGACGCAATTGCTGGTCTGCTTGGCCAACTCTTCCAGGAAGGACAGAAATTGCCGCCGTaGACAATGAAACTGGCCACT +
Preference number: 5 (lower is better)
Translates to: TDLQDAIAGLLGQLFQEGQKLPP*TMKLAT
Trigger: AGTGGCCAGTTTCATTGTCAACGGCGGCAATTTCTG...TCCTTCCTGGAAGAGTTGGCCAAGCAGACCAGCAATTGCGTCCTGGAGATCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CAA 90 bp CCCATTCCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTATCAGGTGTCTTTGTCTaGGTGACATTCTCTGTGTGG +
Preference number: 5 (lower is better)
Translates to: PIPTPCESDHSFHYGKGLSGVFV*VTFSVW
Trigger: CCACACAGAGAATGTCACCAAGACAAAGACACCTGA...TAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CAA 90 bp CACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTGTAGCTTGTCCATGTaGGTGACAATGCTGCGGTTC +
Preference number: 5 (lower is better)
Translates to: HSFHYGKGLGRSKGLFSGCSLSM*VTMLRF
Trigger: GAACCGCAGCATTGTCACCAACATGGACAAGCTACA...CCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CAA 90 bp GTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTGCAAGTTTAGGTGTAGCTaGTCCATGTTGGTGACAATG +
Preference number: 5 (lower is better)
Translates to: VAPRPNFFHKLSSMLPACKFRCS*SMLVTM
Trigger: CATTGTCACCAACATGGACAAGCTACACCTAAACTT...GCAGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CAA 90 bp CATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCAAACCAATGTATGCTTaGACTCCTGCCAACAGCTCA +
Preference number: 5 (lower is better)
Translates to: HVAPRPNFFHKLSSMLPAKPMYA*TPANSS
Trigger: TGAGCTGTTGGCAGGAGTCAAAGCATACATTGGTTT...GGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CAA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGAAACCAATGTATGCTTaGACTCCTGCCAACAGCTCA +
Preference number: 5 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRKPMYA*TPANSS
Trigger: TGAGCTGTTGGCAGGAGTCAAAGCATACATTGGTTT...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CAA 90 bp CTCTTCCCCCAACCGCGTGAGTGCATTTCAGCCATGTGCCAGCTTCTTCTCAAAGCCATCAAGTCCGGCTaGCTAAAGTTGGATCTGATC +
Preference number: 5 (lower is better)
Translates to: LFPQPRECISAMCQLLLKAIKSG*LKLDLI
Trigger: GATCAGATCCAACTTTAGCAAGCCGGACTTGATGGC...TTTGAGAAGAAGCTGGCACATGGCTGAAATGCACTCACGCGGTTGGGGGAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CAA 90 bp CCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGTTTCTGGTTTTAAGCTaGTCAGTCTCCTGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: PQLPLWQGFRKVQRALQWFLVLS*SVSWPS
Trigger: GCTGGGCCAGGAGACTGACAAGCTTAAAACCAGAAA...CCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CAA 90 bp CTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGAAAAGAGGGGCTCCTTaGCTGCTACTCTGCAGTAGG +
Preference number: 5 (lower is better)
Translates to: LPLWQGFRKVQRALQWVLKRGAP*LLLCSR
Trigger: CCTACTGCAGAGTAGCAGCAAAGGAGCCCCTCTTTT...CAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CAA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGCAGAAAAGGGCTAAGTaGAAACAGCTTGTACTCCCT +
Preference number: 5 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRQKRAK*KQLVLP
Trigger: AGGGAGTACAAGCTGTTTCAACTTAGCCCTTTTCTG...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CAA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTCTGGACATTCACTTTTaGCTTCCGGTAGTAAAGGCC +
Preference number: 5 (lower is better)
Translates to: MWPHALTFSISCPPCSQPLDIHF*LPVVKA
Trigger: GGCCTTTACTACCGGAAGCAAAAAGTGAATGTCCAG...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CAA 90 bp CCCATTCCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAACCAAAAATGATGCTTaGGCAGTAGGTGACGGATGG +
Preference number: 5 (lower is better)
Translates to: PIPTPCESDHSFHYGKGLTKNDA*AVGDGW
Trigger: CCATCCGTCACCTACTGCCAAAGCATCATTTTTGGT...TAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CAA 90 bp CATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCATCTCATGGGCACAATaGTACATGCCAATGAGTATC +
Preference number: 5 (lower is better)
Translates to: HVAPRPNFFHKLSSMLPAISWAQ*YMPMSI
Trigger: GATACTCATTGGCATGTACAATTGTGCCCATGAGAT...GGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CAA 90 bp CTCTTCCCCCAACCGCGTGAGTGCATTTCAGCCATGTGCCAGCTTCTTCTCAAAATGTCTGCCACTCTCTaGCCATACCCTTTCAAACTG +
Preference number: 5 (lower is better)
Translates to: LFPQPRECISAMCQLLLKMSATL*PYPFKL
Trigger: CAGTTTGAAAGGGTATGGCAAGAGAGTGGCAGACAT...TTTGAGAAGAAGCTGGCACATGGCTGAAATGCACTCACGCGGTTGGGGGAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CAA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTATTGCTGTATCACTTaGATGTGTCTTCGGACCAGA +
Preference number: 5 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRYCCIT*MCLRTR
Trigger: TCTGGTCCGAAGACACATCAAAGTGATACAGCAATA...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CAA 90 bp CCCATTCCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTACAAGAGCATCAAATCTaGCCAAGTACTGAAGGTGGT +
Preference number: 5 (lower is better)
Translates to: PIPTPCESDHSFHYGKGLQEHQI*PSTEGG
Trigger: ACCACCTTCAGTACTTGGCAAGATTTGATGCTCTTG...TAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CAA 90 bp CCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGATGAGGTTCATCACCTaGGCTAAGTCAGGGTTCTCA +
Preference number: 5 (lower is better)
Translates to: PQLPLWQGFRKVQRALQWMRFIT*AKSGFS
Trigger: TGAGAACCCTGACTTAGCCAAGGTGATGAACCTCAT...CCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CAA 90 bp CCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGATACTCAAGGTCACCTaGATGTCTGTGTCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: PQLPLWQGFRKVQRALQWILKVT*MSVSGV
Trigger: CACTCCAGACACAGACATCAAGGTGACCTTGAGTAT...CCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CAA 90 bp CACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGCACGCCCGGCTAGTTTaGGTATTTTTAGTAGAGACG +
Preference number: 5 (lower is better)
Translates to: HYGKGLGRSKGLFSGYWQHARLV*VFLVET
Trigger: CGTCTCTACTAAAAATACCAAAACTAGCCGGGCGTG...CTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CAA 90 bp CCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGCTCACCTTCTCCAATTaGCTCCTTCTAAGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: PQLPLWQGFRKVQRALQWLTFSN*LLLRSL
Trigger: CAGAGACCTTAGAAGGAGCAAATTGGAGAAGGTGAG...CCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CAA 90 bp CACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGGTATTCACAGCACAGTaGTTCCCTTCCTGCAAAGCA +
Preference number: 5 (lower is better)
Translates to: HSFHYGKGLGRSKGLFSGVFTAQ*FPSCKA
Trigger: TGCTTTGCAGGAAGGGAACAACTGTGCTGTGAATAC...CCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CAA 90 bp GGTGGAAGGCCCGAGACACCTCCCGATAGGCATTTCGAAGCAGGACATAAGGGATTCTTGTTGATATACTaGAGAGATGGTTCCATGGAC +
Preference number: 5 (lower is better)
Translates to: GGRPETPPDRHFEAGHKGFLLIY*RDGSMD
Trigger: GTCCATGGAACCATCTCTCAAGTATATCAACAAGAA...TCCCTTATGTCCTGCTTCGAAATGCCTATCGGGAGGTGTCTCGGGCCTTCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CAA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCAGCAATTACATGTTCCTaGCTCTCCTTTATGTCTGCC +
Preference number: 5 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQAAITCS*LSFMSA
Trigger: GGCAGACATAAAGGAGAGCAAGGAACATGTAATTGC...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CAA 90 bp CACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCAATTACATGTTCCTaGCTCTCCTTTATGTCTGCC +
Preference number: 5 (lower is better)
Translates to: HYGKGLGRSKGLFSGYWQAITCS*LSFMSA
Trigger: GGCAGACATAAAGGAGAGCAAGGAACATGTAATTGC...CTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CAA 90 bp CCCATTCCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTATATTGCTGTATCACTTaGATGTGTCTTCGGACCAGA +
Preference number: 5 (lower is better)
Translates to: PIPTPCESDHSFHYGKGLYCCIT*MCLRTR
Trigger: TCTGGTCCGAAGACACATCAAAGTGATACAGCAATA...TAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGGAATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CAA 90 bp CTCTTCCCCCAACCGCGTGAGTGCATTTCAGCCATGTGCCAGCTTCTTCTCAAATTCTTGTTCTTGGCTTaGCTGATTGTAGTGGCACAG +
Preference number: 5 (lower is better)
Translates to: LFPQPRECISAMCQLLLKFLFLA*LIVVAQ
Trigger: CTGTGCCACTACAATCAGCAAAGCCAAGAACAAGAA...TTTGAGAAGAAGCTGGCACATGGCTGAAATGCACTCACGCGGTTGGGGGAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CAA 90 bp CACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTTCTTGTTCTTGGCTTaGCTGATTGTAGTGGCACAG +
Preference number: 5 (lower is better)
Translates to: HSFHYGKGLGRSKGLFSGFLFLA*LIVVAQ
Trigger: CTGTGCCACTACAATCAGCAAAGCCAAGAACAAGAA...CCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CAA 90 bp ACAGATCTCCAGGACGCAATTGCTGGTCTGCTTGGCCAACTCTTCCAGGAAGGATTCTTGTTCTTGGCTTaGCTGATTGTAGTGGCACAG +
Preference number: 5 (lower is better)
Translates to: TDLQDAIAGLLGQLFQEGFLFLA*LIVVAQ
Trigger: CTGTGCCACTACAATCAGCAAAGCCAAGAACAAGAA...TCCTTCCTGGAAGAGTTGGCCAAGCAGACCAGCAATTGCGTCCTGGAGATCTGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CAA 90 bp ATAAGGGACTTCCCACCCTCTGTCCATCTACCTTTAGCACACATCCCTTGGCTTTGTAGCTTGTCCATGTaGGTGACAATGCTGCGGTTC +
Preference number: 5 (lower is better)
Translates to: IRDFPPSVHLPLAHIPWLCSLSM*VTMLRF
Trigger: GAACCGCAGCATTGTCACCAACATGGACAAGCTACA...AAGCCAAGGGATGTGTGCTAAAGGTAGATGGACAGAGGGTGGGAAGTCCCTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CAA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTAAGTTTAGGTGTAGCTaGTCCATGTTGGTGACAATG +
Preference number: 5 (lower is better)
Translates to: MWPHALTFSISCPPCSQPKFRCS*SMLVTM
Trigger: CATTGTCACCAACATGGACAAGCTACACCTAAACTT...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CAA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTGTATACATGATTCATaGTCAGTGCCAGTTCTGTCA +
Preference number: 5 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRCIHDS*SVPVLS
Trigger: TGACAGAACTGGCACTGACAATGAATCATGTATACA...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CAA 90 bp CACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTGTCAGTTATCCTGGTaGTGGCAGTGTACTACAGTT +
Preference number: 5 (lower is better)
Translates to: HSFHYGKGLGRSKGLFSGCQLSW*WQCTTV
Trigger: AACTGTAGTACACTGCCACAACCAGGATAACTGACA...CCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CAA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTTTCTTGTTGATATACTaGAGAGATGGTTCCATGGAC +
Preference number: 5 (lower is better)
Translates to: MWPHALTFSISCPPCSQPFLLIY*RDGSMD
Trigger: GTCCATGGAACCATCTCTCAAGTATATCAACAAGAA...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CAA 90 bp CTCTTCCCCCAACCGCGTGAGTGCATTTCAGCCATGTGCCAGCTTCTTCTCAAAATCTCATGGGCACAATaGTACATGCCAATGAGTATC +
Preference number: 5 (lower is better)
Translates to: LFPQPRECISAMCQLLLKISWAQ*YMPMSI
Trigger: GATACTCATTGGCATGTACAATTGTGCCCATGAGAT...TTTGAGAAGAAGCTGGCACATGGCTGAAATGCACTCACGCGGTTGGGGGAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CAA 90 bp TTTTTCTACGGAGTCCAGCATTCGGGAGTGGAAGACAATGAGGTTCATCACCTTCTCCACTCACAGCCTTaGTGTGAGGCCCAAACTCTT +
Preference number: 5 (lower is better)
Translates to: FFYGVQHSGVEDNEVHHLLHSQP*CEAQTL
Trigger: AAGAGTTTGGGCCTCACACAAAGGCTGTGAGTGGAG...AAGGTGATGAACCTCATTGTCTTCCACTCCCGAATGCTGGACTCCGTAGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CAA 90 bp GTTCGCCATGTTGACCAGGCTGGTCTTAACCTCCTTAGCTCAAGAGATCCACTGGAAACTGGCCACTGTTaGCAATTACATGTTCCTTGC +
Preference number: 5 (lower is better)
Translates to: VRHVDQAGLNLLSSRDPLETGHC*QLHVPC
Trigger: GCAAGGAACATGTAATTGCAAACAGTGGCCAGTTTC...CAGTGGATCTCTTGAGCTAAGGAGGTTAAGACCAGCCTGGTCAACATGGCGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CAA 90 bp CTCTTCCCCCAACCGCGTGAGTGCATTTCAGCCATGTGCCAGCTTCTTCTCAAATATTGCTGTATCACTTaGATGTGTCTTCGGACCAGA +
Preference number: 5 (lower is better)
Translates to: LFPQPRECISAMCQLLLKYCCIT*MCLRTR
Trigger: TCTGGTCCGAAGACACATCAAAGTGATACAGCAATA...TTTGAGAAGAAGCTGGCACATGGCTGAAATGCACTCACGCGGTTGGGGGAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CAA 90 bp CACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGGTACTGAAGGTGGTATaGCTGTATCACTTTGATGTG +
Preference number: 5 (lower is better)
Translates to: HSFHYGKGLGRSKGLFSGVLKVV*LYHFDV
Trigger: CACATCAAAGTGATACAGCAATACCACCTTCAGTAC...CCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CAA 90 bp CTTCCACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGCAAGAGCATCAAATCTaGCCAAGTACTGAAGGTGGT +
Preference number: 5 (lower is better)
Translates to: LPLWQGFRKVQRALQWVLQEHQI*PSTEGG
Trigger: ACCACCTTCAGTACTTGGCAAGATTTGATGCTCTTG...CAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CAA 90 bp CCCACCCCCTGCGAAAGTGACCACAGCTTCCACTATGGCAAGGGTTTAGGAAGGTTCTCCATTATCAACTaGTTTGAGATTCAGAGAGGA +
Preference number: 5 (lower is better)
Translates to: PTPCESDHSFHYGKGLGRFSIIN*FEIQRG
Trigger: TCCTCTCTGAATCTCAAACAAGTTGATAATGGAGAA...CCTTCCTAAACCCTTGCCATAGTGGAAGCTGTGGTCACTTTCGCAGGGGGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CAA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTTGTATACATGATTCATaGTCAGTGCCAGTTCTGTCA +
Preference number: 5 (lower is better)
Translates to: MWPHALTFSISCPPCSQPCIHDS*SVPVLS
Trigger: TGACAGAACTGGCACTGACAATGAATCATGTATACA...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CAA 90 bp GAGGCAGTGTTTCTACTGTCCAAACAAAAGGGGGCACCTATGCAAGTATCTTGCTTTCTGGTTTTAAGCTaGTCAGTCTCCTGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: EAVFLLSKQKGAPMQVSCFLVLS*SVSWPS
Trigger: GCTGGGCCAGGAGACTGACAAGCTTAAAACCAGAAA...GCAAGATACTTGCATAGGTGCCCCCTTTTGTTTGGACAGTAGAAACACTGCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CAA 90 bp CATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCAAGAGCAGACAACTGTaGCTAAGAAAAATCTGTATG +
Preference number: 5 (lower is better)
Translates to: HVAPRPNFFHKLSSMLPAKSRQL*LRKICM
Trigger: CATACAGATTTTTCTTAGCAACAGTTGTCTGCTCTT...GGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CAA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTTGCCCAGCTAATTTTTaGTATTTTTGGAGAGACAGG +
Preference number: 5 (lower is better)
Translates to: MWPHALTFSISCPPCSQPCPANF*YFWRDR
Trigger: CCTGTCTCTCCAAAAATACAAAAAATTAGCTGGGCA...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CAA 90 bp CACTATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGAAGAATTGGGTATACTaGTTCCACTCTGAGGCTCAA +
Preference number: 5 (lower is better)
Translates to: HYGKGLGRSKGLFSGYWQKNWVY*FHSEAQ
Trigger: TTGAGCCTCAGAGTGGAACAAGTATACCCAATTCTT...CTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS CCA 90 bp CTTACTTACCATCCTTCTCAATGCTATAAAAGGAAGAAGGGTCAGTaGCAAGGAGTGGGAGGGAAACTGCCAGAAAGATCAAGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: LTYHPSQCYKRKKGQ*QGVGGKLPERSRAG
Trigger: GCCTGCTCTTGATCTTTCTGGCAGTTTCCCTCCCACTCCTTGCCACTGACCCTTCTTCCTTTTATAGCATTGAGAAGGATGGTAAGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548980.1
CDS-3UTR CAA 90 bp CATCTCATGAGTGCAGTGGACAAAGTGAGCACAAATCAGGGGGAAAGCAATGGCGCAATTACATGTTCCTaGCTCTCCTTTATGTCTGCC +
Preference number: 5 (lower is better)
Translates to: HLMSAVDKVSTNQGESNGAITCS*LSFMSA
Trigger: GGCAGACATAAAGGAGAGCAAGGAACATGTAATTGC...GCCATTGCTTTCCCCCTGATTTGTGCTCACTTTGTCCACTGCACTCATGAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CAA 90 bp GTTCGCCATGTTGACCAGGCTGGTCTTAACCTCCTTAGCTCAAGAGATCCACTGGTACTGAAGGTGGTATaGCTGTATCACTTTGATGTG +
Preference number: 5 (lower is better)
Translates to: VRHVDQAGLNLLSSRDPLVLKVV*LYHFDV
Trigger: CACATCAAAGTGATACAGCAATACCACCTTCAGTAC...CAGTGGATCTCTTGAGCTAAGGAGGTTAAGACCAGCCTGGTCAACATGGCGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CAA 90 bp CATCTCATGAGTGCAGTGGACAAAGTGAGCACAAATCAGGGGGAAAGCAATGGCCAAGAGCATCAAATCTaGCCAAGTACTGAAGGTGGT +
Preference number: 5 (lower is better)
Translates to: HLMSAVDKVSTNQGESNGQEHQI*PSTEGG
Trigger: ACCACCTTCAGTACTTGGCAAGATTTGATGCTCTTG...GCCATTGCTTTCCCCCTGATTTGTGCTCACTTTGTCCACTGCACTCATGAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CAA 90 bp ATGTGGCCCCACGCCCTAACTTTTTCCATAAGCTGTCCTCCATGCTCCCAGCCTTTCTCCATTATCAACTaGTTTGAGATTCAGAGAGGA +
Preference number: 5 (lower is better)
Translates to: MWPHALTFSISCPPCSQPFSIIN*FEIQRG
Trigger: TCCTCTCTGAATCTCAAACAAGTTGATAATGGAGAA...AGGCTGGGAGCATGGAGGACAGCTTATGGAAAAAGTTAGGGCGTGGGGCCACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CAA 90 bp ATGAGTGCAGTGGACAAAGTGAGCACAAATCAGGGGGAAAGCAATGGCATAACGATGAGGTTCATCACCTaGGCTAAGTCAGGGTTCTCA +
Preference number: 5 (lower is better)
Translates to: MSAVDKVSTNQGESNGITMRFIT*AKSGFS
Trigger: TGAGAACCCTGACTTAGCCAAGGTGATGAACCTCAT...CGTTATGCCATTGCTTTCCCCCTGATTTGTGCTCACTTTGTCCACTGCACTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CAA 90 bp TGTGTAGAGTGTGGTGATTGTCTGTTCCCCACAGGAATCCAGTGGTTGTGTCTGAAACCAATGTATGCTTaGACTCCTGCCAACAGCTCA +
Preference number: 5 (lower is better)
Translates to: CVECGDCLFPTGIQWLCLKPMYA*TPANSS
Trigger: TGAGCTGTTGGCAGGAGTCAAAGCATACATTGGTTT...CAGACACAACCACTGGATTCCTGTGGGGAACAGACAATCACCACACTCTACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CAA 90 bp CAAGGTCACCTTGATGTCTGTGTCTGGAGTGACAAACTCCTTCAAGCACTCAATGCCATCAAGTCCGGCTaGCTAAAGTTGGATCTGATC +
Preference number: 5 (lower is better)
Translates to: QGHLDVCVWSDKLLQALNAIKSG*LKLDLI
Trigger: GATCAGATCCAACTTTAGCAAGCCGGACTTGATGGC...ATTGAGTGCTTGAAGGAGTTTGTCACTCCAGACACAGACATCAAGGTGACCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CAA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCACATTCTTTAGTTCCTTaGGGCCTAAGTAAAGCAAAC +
Preference number: 5 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQAHSLVP*GLSKAN
Trigger: GTTTGCTTTACTTAGGCCCAAAGGAACTAAAGAATG...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CAA 90 bp TATGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCATCTGAACAAGTCTTCTaGATGTTATACATACGGATG +
Preference number: 5 (lower is better)
Translates to: YGKGLGRSKGLFSGYWQASEQVF*MLYIRM
Trigger: CATCCGTATGTATAACATCAAGAAGACTTGTTCAGA...TGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000548221.5
CDS-3UTR CAA 90 bp TGGCAAGGGTTTAGGAAGGTCCAAAGGGCTCTTCAGTGGGTACTGGCAGGCATTTCTGAACAAGTCTTCTaGATGTTATACATACGGATG +
Preference number: 5 (lower is better)
Translates to: WQGFRKVQRALQWVLAGISEQVF*MLYIRM
Trigger: CATCCGTATGTATAACATCAAGAAGACTTGTTCAGA...AATGCCTGCCAGTACCCACTGAAGAGCCCTTTGGACCTTCCTAAACCCTTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CAA 90 bp GTTCGCCATGTTGACCAGGCTGGTCTTAACCTCCTTAGCTCAAGAGATCCACTGTTCTTGTTGATATACTaGAGAGATGGTTCCATGGAC +
Preference number: 5 (lower is better)
Translates to: VRHVDQAGLNLLSSRDPLFLLIY*RDGSMD
Trigger: GTCCATGGAACCATCTCTCAAGTATATCAACAAGAA...CAGTGGATCTCTTGAGCTAAGGAGGTTAAGACCAGCCTGGTCAACATGGCGAAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CAA 90 bp CAAGGTCACCTTGATGTCTGTGTCTGGAGTGACAAACTCCTTCAAGCACTCAATTCAGGTGTCTTTGTCTaGGTGACATTCTCTGTGTGG +
Preference number: 5 (lower is better)
Translates to: QGHLDVCVWSDKLLQALNSGVFV*VTFSVW
Trigger: CCACACAGAGAATGTCACCAAGACAAAGACACCTGA...ATTGAGTGCTTGAAGGAGTTTGTCACTCCAGACACAGACATCAAGGTGACCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CAA 90 bp GAAGATAGTATGTTCAAACACGGAGAAACTGTATACATGATTCATTGTCAGTGCCTCCCGAAGTCCCTCTaGGGCCATGGCCCTGAAACT +
Preference number: 5 (lower is better)
Translates to: EDSMFKHGETVYMIHCQCLPKSL*GHGPET
Trigger: AGTTTCAGGGCCATGGCCCAAGAGGGACTTCGGGAG...GCACTGACAATGAATCATGTATACAGTTTCTCCGTGTTTGAACATACTATCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CAA 90 bp GTTCGCCATGTTGACCAGGCTGGTCTTAACCTCCTTAGCTCAAGAGATCCACTGCAGTGTACTACAGTTTaGCTAGATGTTAGCATTCAG +
Preference number: 5 (lower is better)
Translates to: VRHVDQAGLNLLSSRDPLQCTTV*LDVSIQ
Trigger: CTGAATGCTAACATCTAGCAAAACTGTAGTACACTG...CAGTGGATCTCTTGAGCTAAGGAGGTTAAGACCAGCCTGGTCAACATGGCGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CAA 90 bp GAGGCAGTGTTTCTACTGTCCAAACAAAAGGGGGCACCTATGCAAGTATCTTGCGGTAAAGGAAGCAAATaGCCTGAAATGCTGATGGGT +
Preference number: 5 (lower is better)
Translates to: EAVFLLSKQKGAPMQVSCGKGSK*PEMLMG
Trigger: ACCCATCAGCATTTCAGGCAATTTGCTTCCTTTACC...GCAAGATACTTGCATAGGTGCCCCCTTTTGTTTGGACAGTAGAAACACTGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293373.11
CDS-3UTR CAA 90 bp GACAAAGTGAGCACAAATCAGGGGGAAAGCAATGGCATAACGCAACATGGCAGAATCTCATGGGCACAATaGTACATGCCAATGAGTATC +
Preference number: 5 (lower is better)
Translates to: DKVSTNQGESNGITQHGRISWAQ*YMPMSI
Trigger: GATACTCATTGGCATGTACAATTGTGCCCATGAGAT...TCTGCCATGTTGCGTTATGCCATTGCTTTCCCCCTGATTTGTGCTCACTTTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CAA 90 bp ATGAGTGCAGTGGACAAAGTGAGCACAAATCAGGGGGAAAGCAATGGCATAACGGTACTGAAGGTGGTATaGCTGTATCACTTTGATGTG +
Preference number: 5 (lower is better)
Translates to: MSAVDKVSTNQGESNGITVLKVV*LYHFDV
Trigger: CACATCAAAGTGATACAGCAATACCACCTTCAGTAC...CGTTATGCCATTGCTTTCCCCCTGATTTGTGCTCACTTTGTCCACTGCACTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS-3UTR CAA 90 bp CACCACCAGCTTCTTCAGCTCCACAATCTGAGAGGTCACATGCCACATCAGGTTTTCTCCATTATCAACTaGTTTGAGATTCAGAGAGGA +
Preference number: 5 (lower is better)
Translates to: HHQLLQLHNLRGHMPHQVFSIIN*FEIQRG
Trigger: TCCTCTCTGAATCTCAAACAAGTTGATAATGGAGAA...AACCTGATGTGGCATGTGACCTCTCAGATTGTGGAGCTGAAGAAGCTGGTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS TCA 90 bp AAACGGCTCAAGAGAGCTCACCCGAAATTCCATGACATCCACAAATaGCTGGTAGTAGTTGGTGAGGAATCTAATTATCTCGGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: KRLKRAHPKFHDIHK*LVVVGEESNYLGFF
Trigger: GAAAAAGCCGAGATAATTAGATTCCTCACCAACTACTACCAGTCATTTGTGGATGTCATGGAATTTCGGGTGAGCTCTCTTGAGCCGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547500.1
CDS GCA 90 bp GGACAGAAACTGAATGATGTCACTGAGCACAAGAGCATCAAATCTTaGCAAGTACTGAAGGTGGTATTGCTGTATCACTTTGATGTGTCT +
Preference number: 5 (lower is better)
Translates to: GQKLNDVTEHKSIKS*QVLKVVLLYHFDVS
Trigger: AGACACATCAAAGTGATACAGCAATACCACCTTCAGTACTTGGCAAGATTTGATGCTCTTGTGCTCAGTGACATCATTCAGTTTCTGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS GCA 90 bp AGACAAGTTCTGAATGATGTCACTGAGCACAAGAGCATCAAATCTTaGCAAGTACTGAAGGTGGTATTGCTGTATCACTTTGATGTGTCT +
Preference number: 5 (lower is better)
Translates to: RQVLNDVTEHKSIKS*QVLKVVLLYHFDVS
Trigger: AGACACATCAAAGTGATACAGCAATACCACCTTCAGTACTTGGCAAGATTTGATGCTCTTGTGCTCAGTGACATCATTCAGAACTTGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293373.11
ENST00000545638.2
CDS-3UTR CAA 90 bp GTACTCAGAAGGGAAGATAGTATGTTCAAACACGGAGAAACTGTATACATGATTATACTCAAGGTCACCTaGATGTCTGTGTCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: VLRREDSMFKHGETVYMIILKVT*MSVSGV
Trigger: CACTCCAGACACAGACATCAAGGTGACCTTGAGTAT...AATCATGTATACAGTTTCTCCGTGTTTGAACATACTATCTTCCCTTCTGAGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS TCA 90 bp GAGAAGTTCATATACATGATCCCGAAATTCCATGACATCCACAAATaGCTGGTAGTAGTTGGTGAGGAATCTAATTATCTCGGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: EKFIYMIPKFHDIHK*LVVVGEESNYLGFF
Trigger: GAAAAAGCCGAGATAATTAGATTCCTCACCAACTACTACCAGTCATTTGTGGATGTCATGGAATTTCGGGATCATGTATATGAACTTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS-3UTR CAA 90 bp AGAAGGGAAGATAGTATGTTCAAACACGGAGAAACTGTATACATGATTCATTGTAAGTTTAGGTGTAGCTaGTCCATGTTGGTGACAATG +
Preference number: 5 (lower is better)
Translates to: RREDSMFKHGETVYMIHCKFRCS*SMLVTM
Trigger: CATTGTCACCAACATGGACAAGCTACACCTAAACTT...ACAATGAATCATGTATACAGTTTCTCCGTGTTTGAACATACTATCTTCCCTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548221.5
CDS TCA 72 bp AGCTTCTTCAGAGGGTGGTCATACTCCAAGACCATCTaGCCCAGACGGGCAAAACTGGGGTCACCATGCCCA +
Preference number: 6 (lower is better)
Translates to: SFFRGWSYSKTI*PRRAKLGSPCP
Trigger: TGGGCATGGTGACCCCAGTTTTGCCCGTCTGGGTCAGATGGTCTTGGAGTATGACCACCCTCTGAAGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS GCA 72 bp TTGCTGATGAGGCTTAGAAGTTGGGCACTGCGCCACTaGTCAGCCCCCTGGTTTCTTCGGACAAAGAGGAAA +
Preference number: 6 (lower is better)
Translates to: LLMRLRSWALRH*SAPWFLRTKRK
Trigger: TTTCCTCTTTGTCCGAAGAAACCAGGGGGCTGAGCAGTGGCGCAGTGCCCAACTTCTAAGCCTCATCAGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
ENST00000552211.5
CDS CAA 72 bp CACCCTTTCAAACTGCTAAACAGGTCCTCGGTGACTTaGTGCACCTGCAGCACATCCTCACGGATAAGGGTG +
Preference number: 6 (lower is better)
Translates to: HPFKLLNRSSVT*CTCSTSSRIRV
Trigger: CACCCTTATCCGTGAGGATGTGCTGCAGGTGCACAAAGTCACCGAGGACCTGTTTAGCAGTTTGAAAGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548916.1
CDS CAA 90 bp GCAAAACTGGGGTCACCATGCCCATGCAGCATCTCATGGGCACAATaGTACATGCCAATGAGTATCCGCCGATCTTCAATCCGTGACAGA +
Preference number: 6 (lower is better)
Translates to: AKLGSPCPCSISWAQ*YMPMSIRRSSIRDR
Trigger: TCTGTCACGGATTGAAGATCGGCGGATACTCATTGGCATGTACAATTGTGCCCATGAGATGCTGCATGGGCATGGTGACCCCAGTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS GCA 72 bp CCTTTCAAACTGCTAAACAGGTCCTCGGTGACTTTGTaGACCTGCAGCACATCCTCACGGATAAGGGTGATG +
Preference number: 6 (lower is better)
Translates to: PFKLLNRSSVTL*TCSTSSRIRVM
Trigger: CATCACCCTTATCCGTGAGGATGTGCTGCAGGTGCACAAAGTCACCGAGGACCTGTTTAGCAGTTTGAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
ENST00000548916.1
ENST00000552211.5
CDS CCA 72 bp TCCTCAGGTGTCTTTGTCTTGGTGACATTCTCTGTGTaGCGAACCAGCCAGGTGACCTCATCACGAATGAAG +
Preference number: 6 (lower is better)
Translates to: SSGVFVLVTFSV*RTSQVTSSRMK
Trigger: CTTCATTCGTGATGAGGTCACCTGGCTGGTTCGCCACACAGAGAATGTCACCAAGACAAAGACACCTGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS CAA 72 bp GGGTCACCATGCCCATGCAGCATCTCATGGGCACAATaGTACATGCCAATGAGTATCCGCCGATCTTCAATC +
Preference number: 6 (lower is better)
Translates to: GSPCPCSISWAQ*YMPMSIRRSSI
Trigger: GATTGAAGATCGGCGGATACTCATTGGCATGTACAATTGTGCCCATGAGATGCTGCATGGGCATGGTGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS CAA 72 bp TACCCTTTCAAACTGCTAAACAGGTCCTCGGTGACTTaGTGCACCTGCAGCACATCCTCACGGATAAGGGTG +
Preference number: 6 (lower is better)
Translates to: YPFKLLNRSSVT*CTCSTSSRIRV
Trigger: CACCCTTATCCGTGAGGATGTGCTGCAGGTGCACAAAGTCACCGAGGACCTGTTTAGCAGTTTGAAAGGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
ENST00000552211.5
CDS CAA 90 bp ATCAGCCAACACAGTCTCCAGCTCCTTCACTGCCATCCGCAGAAATaGCCGCCGTTGACAATGAAACTGGCCACTGTTTGCAATTACATG +
Preference number: 6 (lower is better)
Translates to: ISQHSLQLLHCHPQK*PPLTMKLATVCNYM
Trigger: CATGTAATTGCAAACAGTGGCCAGTTTCATTGTCAACGGCGGCAATTTCTGCGGATGGCAGTGAAGGAGCTGGAGACTGTGTTGGCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
ENST00000552211.5
CDS TCA 72 bp AGCTTCTGGCACTGGCTATTGGAGTTGAGGCACCCATaGCAAAGAAGAAACCCAATGATAATCCAGCGCTCC +
Preference number: 6 (lower is better)
Translates to: SFWHWLLELRHP*QRRNPMIIQRS
Trigger: GGAGCGCTGGATTATCATTGGGTTTCTTCTTTGTCATGGGTGCCTCAACTCCAATAGCCAGTGCCAGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
ENST00000548916.1
ENST00000552211.5
CDS CCA 72 bp AGAGGGGCCTTAGCCACGCTAGTGTATGCCTGCGGTTaGAGTTGGGAAAGTGTGGAGAAAAATAAGATGAAT +
Preference number: 6 (lower is better)
Translates to: RGALATLVYACG*SWESVEKNKMN
Trigger: ATTCATCTTATTTTTCTCCACACTTTCCCAACTCCAACCGCAGGCATACACTAGCGTGGCTAAGGCCCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549451.1
CDS TCA 72 bp CATGCAGCATCTCATGGGCACAATTGTACATGCCAATaGGTATCCGCCGATCTTCAATCCGTGACAGAAGTA +
Preference number: 6 (lower is better)
Translates to: HAASHGHNCTCQ*VSADLQSVTEV
Trigger: TACTTCTGTCACGGATTGAAGATCGGCGGATACTCATTGGCATGTACAATTGTGCCCATGAGATGCTGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS CAA 90 bp ACTGAGCACAAGAGCATCAAATCTTGCCAAGTACTGAAGGTGGTATaGCTGTATCACTTTGATGTGTCTTCGGACCAGAGACCTAATCCC +
Preference number: 6 (lower is better)
Translates to: TEHKSIKSCQVLKVV*LYHFDVSSDQRPNP
Trigger: GGGATTAGGTCTCTGGTCCGAAGACACATCAAAGTGATACAGCAATACCACCTTCAGTACTTGGCAAGATTTGATGCTCTTGTGCTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS CAA 72 bp AGGCATGAGCCACGGTGTCCAGCCTTCAAGTGCTTTTaGAAACAGAACTTTACACCCAAGTCAGAAGTCTAT +
Preference number: 6 (lower is better)
Translates to: RHEPRCPAFKCF*KQNFTPKSEVY
Trigger: ATAGACTTCTGACTTGGGTGTAAAGTTCTGTTTCAAAAAGCACTTGAAGGCTGGACACCGTGGCTCATGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548980.1
CDS GCA 72 bp AATGAAACTGGCCACTGTTTGCAATTACATGTTCCTTaGTCTCCTTTATGTCTGCCACTCTCTTGCCATACC +
Preference number: 6 (lower is better)
Translates to: NETGHCLQLHVP*SPLCLPLSCHT
Trigger: GGTATGGCAAGAGAGTGGCAGACATAAAGGAGAGCAAGGAACATGTAATTGCAAACAGTGGCCAGTTTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
ENST00000552211.5
CDS TCA 72 bp GTATCCGCCGATCTTCAATCCGTGACAGAAGTAAAATaGCTGAGGTGTAAGTTACAATCAAGTCCAGGTAAC +
Preference number: 6 (lower is better)
Translates to: VSADLQSVTEVK*LRCKLQSSPGN
Trigger: GTTACCTGGACTTGATTGTAACTTACACCTCAGTCATTTTACTTCTGTCACGGATTGAAGATCGGCGGATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS CAA 72 bp AAGAGCATCAAATCTTGCCAAGTACTGAAGGTGGTATaGCTGTATCACTTTGATGTGTCTTCGGACCAGAGA +
Preference number: 6 (lower is better)
Translates to: KSIKSCQVLKVV*LYHFDVSSDQR
Trigger: TCTCTGGTCCGAAGACACATCAAAGTGATACAGCAATACCACCTTCAGTACTTGGCAAGATTTGATGCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS CAA 90 bp CGATGTACTGGTCCTAAATGTTGCGTGCTGTTTCGGACATCTATGTaGGGAAATTTCTTGTTGATATACTTGAGAGATGGTTCCATGGAC +
Preference number: 6 (lower is better)
Translates to: RCTGPKCCVLFRTSM*GNFLLIYLRDGSMD
Trigger: GTCCATGGAACCATCTCTCAAGTATATCAACAAGAAATTTCCCAACATAGATGTCCGAAACAGCACGCAACATTTAGGACCAGTACATCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000547500.1
ENST00000548221.5
CDS TCA 72 bp AAGAGAGCTCACCCGAAATTCCATGACATCCACAAATaGCTGGTAGTAGTTGGTGAGGAATCTAATTATCTC +
Preference number: 6 (lower is better)
Translates to: KRAHPKFHDIHK*LVVVGEESNYL
Trigger: GAGATAATTAGATTCCTCACCAACTACTACCAGTCATTTGTGGATGTCATGGAATTTCGGGTGAGCTCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547500.1
CDS GCA 72 bp GTTTGCAATTACATGTTCCTTGCTCTCCTTTATGTCTaGCACTCTCTTGCCATACCCTTTCAAACTGCTAAA +
Preference number: 6 (lower is better)
Translates to: VCNYMFLALLYV*HSLAIPFQTAK
Trigger: TTTAGCAGTTTGAAAGGGTATGGCAAGAGAGTGGCAGACATAAAGGAGAGCAAGGAACATGTAATTGCAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
ENST00000552211.5
CDS GCA 72 bp CTGAATGATGTCACTGAGCACAAGAGCATCAAATCTTaGCAAGTACTGAAGGTGGTATTGCTGTATCACTTT +
Preference number: 6 (lower is better)
Translates to: LNDVTEHKSIKS*QVLKVVLLYHF
Trigger: AAAGTGATACAGCAATACCACCTTCAGTACTTGGCAAGATTTGATGCTCTTGTGCTCAGTGACATCATTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS CAA 90 bp GTGCTGTTTCGGACATCTATGTTGGGAAATTTCTTGTTGATATACTaGAGAGATGGTTCCATGGACTTTTCCAGTAAGAAAGGTGGCTTA +
Preference number: 6 (lower is better)
Translates to: VLFRTSMLGNFLLIY*RDGSMDFSSKKGGL
Trigger: TAAGCCACCTTTCTTACTGGAAAAGTCCATGGAACCATCTCTCAAGTATATCAACAAGAAATTTCCCAACATAGATGTCCGAAACAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000547500.1
ENST00000548221.5
CDS CAA 90 bp CCTAAATGTTGCGTGCTGTTTCGGACATCTATGTTGGGAAATTTCTaGTTGATATACTTGAGAGATGGTTCCATGGACTTTTCCAGTAAG +
Preference number: 6 (lower is better)
Translates to: PKCCVLFRTSMLGNF*LIYLRDGSMDFSSK
Trigger: CTTACTGGAAAAGTCCATGGAACCATCTCTCAAGTATATCAACAAGAAATTTCCCAACATAGATGTCCGAAACAGCACGCAACATTTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000547500.1
ENST00000548221.5
CDS CAA 72 bp TGCGTGCTGTTTCGGACATCTATGTTGGGAAATTTCTaGTTGATATACTTGAGAGATGGTTCCATGGACTTT +
Preference number: 6 (lower is better)
Translates to: CVLFRTSMLGNF*LIYLRDGSMDF
Trigger: AAAGTCCATGGAACCATCTCTCAAGTATATCAACAAGAAATTTCCCAACATAGATGTCCGAAACAGCACGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000547500.1
ENST00000548221.5
CDS CAA 72 bp GGTCCTAAATGTTGCGTGCTGTTTCGGACATCTATGTaGGGAAATTTCTTGTTGATATACTTGAGAGATGGT +
Preference number: 6 (lower is better)
Translates to: GPKCCVLFRTSM*GNFLLIYLRDG
Trigger: ACCATCTCTCAAGTATATCAACAAGAAATTTCCCAACATAGATGTCCGAAACAGCACGCAACATTTAGGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000547500.1
ENST00000548221.5
CDS CAA 72 bp TTAGAATTAATCGTTACCACCTATATCTGGGAACACTaGTGGAGACTGAAAAAGGATATTGGAGGGGCTAAA +
Preference number: 6 (lower is better)
Translates to: LELIVTTYIWEH*WRLKKDIGGAK
Trigger: TTTAGCCCCTCCAATATCCTTTTTCAGTCTCCACAAGTGTTCCCAGATATAGGTGGTAACGATTAATTCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548916.1
CDS CAA 90 bp AAATGTTGCGTGCTGTTTCGGACATCTATGTTGGGAAATTTCTTGTaGATATACTTGAGAGATGGTTCCATGGACTTTTCCAGTAAGAAA +
Preference number: 6 (lower is better)
Translates to: KCCVLFRTSMLGNFL*IYLRDGSMDFSSKK
Trigger: TTTCTTACTGGAAAAGTCCATGGAACCATCTCTCAAGTATATCAACAAGAAATTTCCCAACATAGATGTCCGAAACAGCACGCAACATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000547500.1
ENST00000548221.5
CDS TCA 72 bp ATATACATGATCCCGAAATTCCATGACATCCACAAATaGCTGGTAGTAGTTGGTGAGGAATCTAATTATCTC +
Preference number: 6 (lower is better)
Translates to: IYMIPKFHDIHK*LVVVGEESNYL
Trigger: GAGATAATTAGATTCCTCACCAACTACTACCAGTCATTTGTGGATGTCATGGAATTTCGGGATCATGTATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000548221.5
CDS CAA 72 bp CGGACATCTATGTTGGGAAATTTCTTGTTGATATACTaGAGAGATGGTTCCATGGACTTTTCCAGTAAGAAA +
Preference number: 6 (lower is better)
Translates to: RTSMLGNFLLIY*RDGSMDFSSKK
Trigger: TTTCTTACTGGAAAAGTCCATGGAACCATCTCTCAAGTATATCAACAAGAAATTTCCCAACATAGATGTCCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293373.11
ENST00000545638.2
ENST00000547500.1
ENST00000548221.5