RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NCKAP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000061676

Ensembl transcript IDs: ENST00000360982.2, ENST00000361354.9, ENST00000478449.5, ENST00000492058.1, ENST00000493359.1

Found 643 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTCTGTCACCTAGGCTGGAGCGCACTGGTATAATCATGGCTCACTaGAGCCTCGAACCACCCACTGCCGCCAACCCTCCCCTTGGGCTC +
Preference number: 1 (lower is better)
Translates to: ALSPRLERTGIIMAH*SLEPPTAANPPLGL
Trigger: GAGCCCAAGGGGAGGGTTGGCGGCAGTGGGTGGTTCGAGGCTGCAGTGAGCCATGATTATACCAGTGCGCTCCAGCCTAGGTGACAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR GCA 90 bp GAACCACCCACTGCCGCCAACCCTCCCCTTGGGCTCAAGCAATCCTaGCACCTCAGCTTCTCAAGTTGCTGGGACTACAGGTGTACACAA +
Preference number: 1 (lower is better)
Translates to: EPPTAANPPLGLKQS*HLSFSSCWDYRCTQ
Trigger: TTGTGTACACCTGTAGTCCCAGCAACTTGAGAAGCTGAGGTGGCAGGATTGCTTGAGCCCAAGGGGAGGGTTGGCGGCAGTGGGTGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR TCA 90 bp CATTTAAGCTGGGAATGCAGCCATACCGGGTGTCAGAGCATGTTGTaGGCACCTCTACCTGGGTGTCCCCCTAGGGCTACAGCTGCTCTC +
Preference number: 1 (lower is better)
Translates to: HLSWECSHTGCQSML*APLPGCPPRATAAL
Trigger: GAGAGCAGCTGTAGCCCTAGGGGGACACCCAGGTAGAGGTGCTCACAACATGCTCTGACACCCGGTATGGCTGCATTCCCAGCTTAAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR TCA 90 bp CAGACCCTCTCCTGGCCAAGAGGACTTCAGGGAAACCTTAAAAACTaGGTTCCCGGCCATGATGGGATGGGAGGTTGGGCACATCTCATT +
Preference number: 1 (lower is better)
Translates to: QTLSWPRGLQGNLKN*VPGHDGMGGWAHLI
Trigger: AATGAGATGTGCCCAACCTCCCATCCCATCATGGCCGGGAACTCAGTTTTTAAGGTTTCCCTGAAGTCCTCTTGGCCAGGAGAGGGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR TCA 90 bp CTCCAGGCCACCCATTTACCAAGTTTGTGGCCCTCATGTAAGAGGTaGCCAAGATGCACCTGCACCAAGAGCACCAAGAGGATTGTCTCA +
Preference number: 1 (lower is better)
Translates to: LQATHLPSLWPSCKR*PRCTCTKSTKRIVS
Trigger: TGAGACAATCCTCTTGGTGCTCTTGGTGCAGGTGCATCTTGGTCACCTCTTACATGAGGGCCACAAACTTGGTAAATGGGTGGCCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR TCA 90 bp GTGCTGGCATATTTGGTGTTTGTGGAGGGTCTGCTTTCTGGTTCATaGACAGTGGCTTCTTGCTTTGTCCTCACGTGGTGGTTGGGGCAA +
Preference number: 1 (lower is better)
Translates to: VLAYLVFVEGLLSGS*TVASCFVLTWWLGQ
Trigger: TTGCCCCAACCACCACGTGAGGACAAAGCAAGAAGCCACTGTTCATGAACCAGAAAGCAGACCCTCCACAAACACCAAATATGCCAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR TCA 90 bp TGTGACCTCCAGCAGCAGAGGCATTCATTCTCCAAGGGTGTTCTATaGGCCTTATTGGTCCTCCCTGTACGATCAGCTGCGAAAGAACTG +
Preference number: 1 (lower is better)
Translates to: CDLQQQRHSFSKGVL*ALLVLPVRSAAKEL
Trigger: CAGTTCTTTCGCAGCTGATCGTACAGGGAGGACCAATAAGGCTCATAGAACACCCTTGGAGAATGAATGCCTCTGCTGCTGGAGGTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CCA 90 bp TTCATGTGTTGGAAATTTGGTCCCCAGTGCAGCAGTGTTGAGAGGTaGGACTTCTGGGAGGTGATTGGTTCACAAGAGCTCTGCCCTCAT +
Preference number: 1 (lower is better)
Translates to: FMCWKFGPQCSSVER*DFWEVIGSQELCPH
Trigger: ATGAGGGCAGAGCTCTTGTGAACCAATCACCTCCCAGAAGTCCCACCTCTCAACACTGCTGCACTGGGGACCAAATTTCCAACACATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR TCA 90 bp CCTTTTACGAGGGCATTAATCCCATTCATGAAGGCTCCACTCTCATaGCCTAATCACCTCCCAAAGGCCCCACATCCTGTCACACTGATG +
Preference number: 1 (lower is better)
Translates to: PFTRALIPFMKAPLS*PNHLPKAPHPVTLM
Trigger: CATCAGTGTGACAGGATGTGGGGCCTTTGGGAGGTGATTAGGTCATGAGAGTGGAGCCTTCATGAATGGGATTAATGCCCTCGTAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR TCA 90 bp CCTGCTGTGGGACAACCCTTGCCACCCCACTCAAGCTACAGTTTTTaGTTGAGTAGGAAAGCCAGCATGATTTGTGTTTCTGCATCCAGG +
Preference number: 1 (lower is better)
Translates to: PAVGQPLPPHSSYSF*LSRKASMICVSASR
Trigger: CCTGGATGCAGAAACACAAATCATGCTGGCTTTCCTACTCAATCAAAAACTGTAGCTTGAGTGGGGTGGCAAGGGTTGTCCCACAGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CCA 90 bp AGCAGCAGAGGCATTCATTCTCCAAGGGTGTTCTATGAGCCTTATTaGTCCTCCCTGTACGATCAGCTGCGAAAGAACTGCCAGTGCAAT +
Preference number: 1 (lower is better)
Translates to: SSRGIHSPRVFYEPY*SSLYDQLRKNCQCN
Trigger: ATTGCACTGGCAGTTCTTTCGCAGCTGATCGTACAGGGAGGACCAATAAGGCTCATAGAACACCCTTGGAGAATGAATGCCTCTGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR TCA 90 bp TCAGGACTCTACAGAGACCCCACTAGCAAGAAGGCCCTCACTAGATaGGAACCCTTGACCTTGTACTTCCCAGCATCTAAAATGGTAAGC +
Preference number: 1 (lower is better)
Translates to: SGLYRDPTSKKALTR*EPLTLYFPASKMVS
Trigger: GCTTACCATTTTAGATGCTGGGAAGTACAAGGTCAAGGGTTCTCATCTAGTGAGGGCCTTCTTGCTAGTGGGGTCTCTGTAGAGTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR GCA 90 bp TGGAGCCTTGGGAACAAGGAAGTTACACTGCCTCGGCAAAGAAAGTaGTTTTCTCCACTGGAACTGCAAAGGAGAATCTCAGCTCTAGGA +
Preference number: 1 (lower is better)
Translates to: WSLGNKEVTLPRQRK*FSPLELQRRISALG
Trigger: TCCTAGAGCTGAGATTCTCCTTTGCAGTTCCAGTGGAGAAAAGCACTTTCTTTGCCGAGGCAGTGTAACTTCCTTGTTCCCAAGGCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR GCA 90 bp TATGTGCCCACAACAGTTGGAGCCTTGGGAACAAGGAAGTTACACTaGCTCGGCAAAGAAAGTGCTTTTCTCCACTGGAACTGCAAAGGA +
Preference number: 1 (lower is better)
Translates to: YVPTTVGALGTRKLH*LGKESAFLHWNCKG
Trigger: TCCTTTGCAGTTCCAGTGGAGAAAAGCACTTTCTTTGCCGAGGCAGTGTAACTTCCTTGTTCCCAAGGCTCCAACTGTTGTGGGCACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR GCA 90 bp GTAGCTGGCTCTTTAACTGGTTCAGACTCTACTATCTTGGAGGACTaGAGGTGCCCTGGTAGCCAAAAGGGCTCTAAGTTCAAACTCAAG +
Preference number: 1 (lower is better)
Translates to: VAGSLTGSDSTILED*RCPGSQKGSKFKLK
Trigger: CTTGAGTTTGAACTTAGAGCCCTTTTGGCTACCAGGGCACCTGCAGTCCTCCAAGATAGTAGAGTCTGAACCAGTTAAAGAGCCAGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CCA 90 bp TGGGAGCTAAGCTATGTGTATGCAAAGGCATACAGAGTGATATCATaGACTTTGGAGACTCAGAAGTGGGAGGATGGGAACGGGTCTAGG +
Preference number: 1 (lower is better)
Translates to: WELSYVYAKAYRVIS*TLETQKWEDGNGSR
Trigger: CCTAGACCCGTTCCCATCCTCCCACTTCTGAGTCTCCAAAGTCCATGATATCACTCTGTATGCCTTTGCATACACATAGCTTAGCTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR GCA 90 bp CTACCAGTTAAGGTCAAATTTTCCCCTCCTAGCCATCACAAGTTCTaGCATCTGGGCCTTGCTTCAGACTGCAAAGACCCTTGTACCTTT +
Preference number: 1 (lower is better)
Translates to: LPVKVKFSPPSHHKF*HLGLASDCKDPCTF
Trigger: AAAGGTACAAGGGTCTTTGCAGTCTGAAGCAAGGCCCAGATGGCAGAACTTGTGATGGCTAGGAGGGGAAAATTTGACCTTAACTGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR GCA 90 bp CAAGGGTGTTCTATGAGCCTTATTGGTCCTCCCTGTACGATCAGCTaGGAAAGAACTGCCAGTGCAATCTTGAGACTAGATGAGGAGTTA +
Preference number: 1 (lower is better)
Translates to: QGCSMSLIGPPCTIS*ERTASAILRLDEEL
Trigger: TAACTCCTCATCTAGTCTCAAGATTGCACTGGCAGTTCTTTCGCAGCTGATCGTACAGGGAGGACCAATAAGGCTCATAGAACACCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CCA 90 bp GGGCCAAATAGCCTCCTGATCCAAGGCCACAAATTCTGTCACATTTaGTGTTCAGACACGTATAACCAAGTCTGTTGGAATGGATGGGGT +
Preference number: 1 (lower is better)
Translates to: GPNSLLIQGHKFCHI*CSDTYNQVCWNGWG
Trigger: ACCCCATCCATTCCAACAGACTTGGTTATACGTGTCTGAACACCAAATGTGACAGAATTTGTGGCCTTGGATCAGGAGGCTATTTGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CCA 90 bp GACAATAGATGTGAAAGAGCAACCCAGAAGTTAGTCCATGTTTGGTaGAAAGGGGTCCTCAGCACCCTCATAGGTCATGCATCCTCAAAA +
Preference number: 1 (lower is better)
Translates to: DNRCERATQKLVHVW*KGVLSTLIGHASSK
Trigger: TTTTGAGGATGCATGACCTATGAGGGTGCTGAGGACCCCTTTCCACCAAACATGGACTAACTTCTGGGTTGCTCTTTCACATCTATTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR TCA 90 bp GATAGGGTCGCAGACAGAAAGTTTTATTCTAAGGAGTTCAACCGCTaGGCCCTAGAGTTAAGGAGAAACAGTGGTTTCTGCAAAGCTGTG +
Preference number: 1 (lower is better)
Translates to: DRVADRKFYSKEFNR*ALELRRNSGFCKAV
Trigger: CACAGCTTTGCAGAAACCACTGTTTCTCCTTAACTCTAGGGCTCAGCGGTTGAACTCCTTAGAATAAAACTTTCTGTCTGCGACCCTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR TCA 90 bp ACAACCACCATCATCCACTGTCAGAACTTTTTCGTCTTCCCCAACTaGAACTCTGTTCCCTTCATACACCTTCTCTTCATTTCCCTCTCC +
Preference number: 1 (lower is better)
Translates to: TTTIIHCQNFFVFPN*NSVPFIHLLFISLS
Trigger: GGAGAGGGAAATGAAGAGAAGGTGTATGAAGGGAACAGAGTTTCAGTTGGGGAAGACGAAAAAGTTCTGACAGTGGATGATGGTGGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR GCA 90 bp ACAGATGACACACTTCTAACTTCTCAAACATGCCAAGTTTGTGCTTaGCTTCTGGGTCTTTGCCTTTATTATTCCTCCCCTCAGCCCACT +
Preference number: 1 (lower is better)
Translates to: TDDTLLTSQTCQVCA*LLGLCLYYSSPQPT
Trigger: AGTGGGCTGAGGGGAGGAATAATAAAGGCAAAGACCCAGAAGGCAAGCACAAACTTGGCATGTTTGAGAAGTTAGAAGTGTGTCATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CCA 90 bp CCTTCTGGGTCTTTGCCTTTATTATTCCTCCCCTCAGCCCACTTGTaGTTCCTTCTAATCCTTCACGTACCAGCTCAAATGTTTTCTCTT +
Preference number: 1 (lower is better)
Translates to: PSGSLPLLFLPSAHL*FLLILHVPAQMFSL
Trigger: AAGAGAAAACATTTGAGCTGGTACGTGAAGGATTAGAAGGAACCACAAGTGGGCTGAGGGGAGGAATAATAAAGGCAAAGACCCAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CCA 90 bp TGCCATCTGGGCCTTGCTTCAGACTGCAAAGACCCTTGTACCTTTTaGCTGAAGGTAAGAATTCAGAATGAACTGACATTCAGCATTAAC +
Preference number: 1 (lower is better)
Translates to: CHLGLASDCKDPCTF*LKVRIQNELTFSIN
Trigger: GTTAATGCTGAATGTCAGTTCATTCTGAATTCTTACCTTCAGCCAAAAGGTACAAGGGTCTTTGCAGTCTGAAGCAAGGCCCAGATGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR GCA 90 bp CCTCATGACAGAGACACAGATGACACACTTCTAACTTCTCAAACATaGCAAGTTTGTGCTTGCCTTCTGGGTCTTTGCCTTTATTATTCC +
Preference number: 1 (lower is better)
Translates to: PHDRDTDDTLLTSQT*QVCACLLGLCLYYS
Trigger: GGAATAATAAAGGCAAAGACCCAGAAGGCAAGCACAAACTTGGCATGTTTGAGAAGTTAGAAGTGTGTCATCTGTGTCTCTGTCATGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CCA 90 bp TGTGTAATGTTGGGAGCAAGTAATGATTTTTCCTCTTTGTTCTTGTaGAGGGATGCTTTGGGTGCTCAGAGGAGCATTGACTACCTTTTC +
Preference number: 1 (lower is better)
Translates to: CVMLGASNDFSSLFL*RDALGAQRSIDYLF
Trigger: GAAAAGGTAGTCAATGCTCCTCTGAGCACCCAAAGCATCCCTCCACAAGAACAAAGAGGAAAAATCATTACTTGCTCCCAACATTACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CCA 90 bp TTCTTCCCTCATTTAATCAGTTGTAGCCAGGGAGAAGTCACATATTaGTATCAGAGTGTGCAGTCACAGAAGGAACTCCCTTTAGCAGTA +
Preference number: 1 (lower is better)
Translates to: FFPHLISCSQGEVTY*YQSVQSQKELPLAV
Trigger: TACTGCTAAAGGGAGTTCCTTCTGTGACTGCACACTCTGATACCAATATGTGACTTCTCCCTGGCTACAACTGATTAAATGAGGGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CCA 90 bp TGGCAATGCAATCTAATTTCTTCACTCCTCATCTTGAGGGGTAAGTaGGCAAACATCAAGAACACTGGCTTATCAGCAACCTTCAGAGAA +
Preference number: 1 (lower is better)
Translates to: WQCNLISSLLILRGK*ANIKNTGLSATFRE
Trigger: TTCTCTGAAGGTTGCTGATAAGCCAGTGTTCTTGATGTTTGCCCACTTACCCCTCAAGATGAGGAGTGAAGAAATTAGATTGCATTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR TCA 90 bp CTGGGGCCAGATTTAAATGTTGGCCTCTGCTACTTCCTTGTAGTGTaGGTTTGTAAAAATTGCTTTGTCTTTCCTGAGCTTCAGTTTCCA +
Preference number: 1 (lower is better)
Translates to: LGPDLNVGLCYFLVV*VCKNCFVFPELQFP
Trigger: TGGAAACTGAAGCTCAGGAAAGACAAAGCAATTTTTACAAACTCACACTACAAGGAAGTAGCAGAGGCCAACATTTAAATCTGGCCCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR TCA 90 bp TTTGTCTATTTATACAAGGGGCTCAGATTCTGCATCTTCTCCCCCTaGCATCCCAGACAAGTGATTTGTCTCATTGGGAGAAATCTTAGA +
Preference number: 1 (lower is better)
Translates to: FVYLYKGLRFCIFSP*HPRQVICLIGRNLR
Trigger: TCTAAGATTTCTCCCAATGAGACAAATCACTTGTCTGGGATGTCAGGGGGAGAAGATGCAGAATCTGAGCCCCTTGTATAAATAGACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CCA 90 bp GGTCTGAGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATaGATGTTAATGTATACTCATATGTGCCCACAACAGTTGGAGCCT +
Preference number: 1 (lower is better)
Translates to: GLSTHVGKTVIINWA*MLMYTHMCPQQLEP
Trigger: AGGCTCCAACTGTTGTGGGCACATATGAGTATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACTCAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR TCA 90 bp TTAGAAGAAACAGGATGGCATGGTAAGGAAAGGGCAAGTGATGTTTaGGCTTACTGTTTACATTATGTTCAGGAGTTTGCCAGCCAGAAT +
Preference number: 1 (lower is better)
Translates to: LEETGWHGKERASDV*AYCLHYVQEFASQN
Trigger: ATTCTGGCTGGCAAACTCCTGAACATAATGTAAACAGTAAGCTCAAACATCACTTGCCCTTTCCTTACCATGCCATCCTGTTTCTTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR GCA 90 bp ATTGCAGCACAATTCATAACTGCAAAGATATGGAACCAACCTAAGTaGCCACTGACCAATGAGTGGACAAAGAAAGTGTGGTATATATAC +
Preference number: 1 (lower is better)
Translates to: IAAQFITAKIWNQPK*PLTNEWTKKVWYIY
Trigger: GTATATATACCACACTTTCTTTGTCCACTCATTGGTCAGTGGGCACTTAGGTTGGTTCCATATCTTTGCAGTTATGAATTGTGCTGCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR TCA 90 bp ATTTTCCAATGCATTCACCTATCCATTGGCCATGGTTACTATCATTaGAACTTTCACTTGAGCCTCTGTTCAGTTTTGACGTTACCATGT +
Preference number: 1 (lower is better)
Translates to: IFQCIHLSIGHGYYH*NFHLSLCSVLTLPC
Trigger: ACATGGTAACGTCAAAACTGAACAGAGGCTCAAGTGAAAGTTTCAATGATAGTAACCATGGCCAATGGATAGGTGAATGCATTGGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CCA 90 bp TGCATGTGTATATTTATTGCAGCACAATTCATAACTGCAAAGATATaGAACCAACCTAAGTGCCCACTGACCAATGAGTGGACAAAGAAA +
Preference number: 1 (lower is better)
Translates to: CMCIFIAAQFITAKI*NQPKCPLTNEWTKK
Trigger: TTTCTTTGTCCACTCATTGGTCAGTGGGCACTTAGGTTGGTTCCATATCTTTGCAGTTATGAATTGTGCTGCAATAAATATACACATGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR TCA 90 bp AGTGGTAGAGAATGCCTTATTTTCATCCTTATGCCCTTTCACATATaGTTCCAAAGTGTACATATCCAAATTCCTACTTTACCTCTCCAG +
Preference number: 1 (lower is better)
Translates to: SGRECLIFILMPFHI*FQSVHIQIPTLPLQ
Trigger: CTGGAGAGGTAAAGTAGGAATTTGGATATGTACACTTTGGAATCATATGTGAAAGGGCATAAGGATGAAAATAAGGCATTCTCTACCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR TCA 90 bp CTCATTGTTAATGTAAAGCAGTTTCAAATGCTACTGGATAGAATTTaGTCCAGCAATCCTACTACTGGGTATCTACCCAAAGGAAGTCAA +
Preference number: 1 (lower is better)
Translates to: LIVNVKQFQMLLDRI*SSNPTTGYLPKGSQ
Trigger: TTGACTTCCTTTGGGTAGATACCCAGTAGTAGGATTGCTGGATCAAATTCTATCCAGTAGCATTTGAAACTGCTTTACATTAACAATGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR TCA 90 bp AAAAACGTTGTATGGTTCACAGCTGAAGAGAGAATAGTTGAGAGTTaGGTGATCTATCCTTCAAACTACAGGCATGATATTCCTTCACTT +
Preference number: 1 (lower is better)
Translates to: KNVVWFTAEERIVES*VIYPSNYRHDIPSL
Trigger: AAGTGAAGGAATATCATGCCTGTAGTTTGAAGGATAGATCACTCAACTCTCAACTATTCTCTCTTCAGCTGTGAACCATACAACGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR GCA 90 bp ATTATAAGCTCTGTGACATCAAGGACCAAATCTGGTTCATGTACATaGCAAGCATTTAGGACACTATGTCCTGTGTATTTATTGATTCAA +
Preference number: 1 (lower is better)
Translates to: IISSVTSRTKSGSCT*QAFRTLCPVYLLIQ
Trigger: TTGAATCAATAAATACACAGGACATAGTGTCCTAAATGCTTGGCATGTACATGAACCAGATTTGGTCCTTGATGTCACAGAGCTTATAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR TCA 90 bp TCAGTTTGGCTCTCTCTGGTGAATCCCACCCCCACACCATGTGATGCTCTGTGTCTGGGATCACAGGAGTaGGCCACCGCGTCTGGCCTT +
Preference number: 2 (lower is better)
Translates to: SVWLSLVNPTPTPCDALCLGSQE*ATASGL
Trigger: AAGGCCAGACGCGGTGGCTCACTCCTGTGATCCCAG...ACACAGAGCATCACATGGTGTGGGGGTGGGATTCACCAGAGAGAGCCAAACTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR GCA 90 bp CCTGGGTGTCCCCCTAGGGCTACAGCTGCTCTCAAGGTCACTTCCTCTCACACATCACCATCAGAAGTTTaGTCATGGCTGGGCGTGGTG +
Preference number: 2 (lower is better)
Translates to: PGCPPRATAALKVTSSHTSPSEV*SWLGVV
Trigger: CACCACGCCCAGCCATGAGCAAACTTCTGATGGTGA...TGTGTGAGAGGAAGTGACCTTGAGAGCAGCTGTAGCCCTAGGGGGACACCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR TCA 90 bp TCAGTTTGGCTCTCTCTGGTGAATCCCACCCCCACACCATGTGATGCTCTGTGTACTTTCTGGGTGCTGTaGCCTCCAGCAGCAGAGGCA +
Preference number: 2 (lower is better)
Translates to: SVWLSLVNPTPTPCDALCTFWVL*PPAAEA
Trigger: TGCCTCTGCTGCTGGAGGTCACAGCACCCAGAAAGT...ACACAGAGCATCACATGGTGTGGGGGTGGGATTCACCAGAGAGAGCCAAACTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR TCA 90 bp ATACAAGGGGCTCAGATTCTGCATCTTCTCCCCCTGACATCCCAGACAAGTGATACTCCTGACCTCAAGTaGTCCATCCGCCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: IQGAQILHLLPLTSQTSDTPDLK*SIRLGL
Trigger: GAGGCCAAGGCGGATGGATCACTTGAGGTCAGGAGT...ATCACTTGTCTGGGATGTCAGGGGGAGAAGATGCAGAATCTGAGCCCCTTGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CCA 90 bp CCTGGGTGTCCCCCTAGGGCTACAGCTGCTCTCAAGGTCACTTCCTCTCACACACAAAGGCAGAGGTCATaGCAAATCTTCGGAGAAAGA +
Preference number: 2 (lower is better)
Translates to: PGCPPRATAALKVTSSHTQRQRS*QIFGER
Trigger: TCTTTCTCCGAAGATTTGCCATGACCTCTGCCTTTG...TGTGTGAGAGGAAGTGACCTTGAGAGCAGCTGTAGCCCTAGGGGGACACCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR TCA 90 bp ATACAAGGGGCTCAGATTCTGCATCTTCTCCCCCTGACATCCCAGACAAGTGATTCTCTTGACCTCAGGTaGTCCATCCACCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: IQGAQILHLLPLTSQTSDSLDLR*SIHLGL
Trigger: GAGGCCAAGGTGGATGGATCACCTGAGGTCAAGAGA...ATCACTTGTCTGGGATGTCAGGGGGAGAAGATGCAGAATCTGAGCCCCTTGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR GCA 90 bp CCTGGGTGTCCCCCTAGGGCTACAGCTGCTCTCAAGGTCACTTCCTCTCACACACTAAATGAGCTGCTTTaGCCTCCATGCCAACTATTA +
Preference number: 2 (lower is better)
Translates to: PGCPPRATAALKVTSSHTLNELL*PPCQLL
Trigger: TAATAGTTGGCATGGAGGGCAAAGCAGCTCATTTAG...TGTGTGAGAGGAAGTGACCTTGAGAGCAGCTGTAGCCCTAGGGGGACACCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR TCA 90 bp TCAGTTTGGCTCTCTCTGGTGAATCCCACCCCCACACCATGTGATGCTCTGTGTTCTCTGTGTCATCACTaGGCTGCTGCTATTACAGGT +
Preference number: 2 (lower is better)
Translates to: SVWLSLVNPTPTPCDALCSLCHH*AAAITG
Trigger: ACCTGTAATAGCAGCAGCTCAGTGATGACACAGAGA...ACACAGAGCATCACATGGTGTGGGGGTGGGATTCACCAGAGAGAGCCAAACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CAA 90 bp TTCTGGAGGCTGGGAAGCCAATCAGTGTGCTGGCATATTTGGTGTTaGTGGAGGGTCTGCTTTCTGGTTCATGAACAGTGGCTTCTTGCT +
Preference number: 2 (lower is better)
Translates to: FWRLGSQSVCWHIWC*WRVCFLVHEQWLLA
Trigger: AGCAAGAAGCCACTGTTCATGAACCAGAAAGCAGACCCTCCACAAACACCAAATATGCCAGCACACTGATTGGCTTCCCAGCCTCCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CAA 90 bp AAAGCTGTGGTAGCTGGCTCTTTAACTGGTTCAGACTCTACTATCTaGGAGGACTGCAGGTGCCCTGGTAGCCAAAAGGGCTCTAAGTTC +
Preference number: 2 (lower is better)
Translates to: KAVVAGSLTGSDSTI*EDCRCPGSQKGSKF
Trigger: GAACTTAGAGCCCTTTTGGCTACCAGGGCACCTGCAGTCCTCCAAGATAGTAGAGTCTGAACCAGTTAAAGAGCCAGCTACCACAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR TCA 90 bp GTTTGTGGAGGGTCTGCTTTCTGGTTCATGAACAGTGGCTTCTTGCTTTGTCCTCTGGTGTTGAACTCCTaGCCTCAAGTGATCCATCCG +
Preference number: 2 (lower is better)
Translates to: VCGGSAFWFMNSGFLLCPLVLNS*PQVIHP
Trigger: CGGATGGATCACTTGAGGTCAGGAGTTCAACACCAG...AGGACAAAGCAAGAAGCCACTGTTCATGAACCAGAAAGCAGACCCTCCACAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR TCA 90 bp CCTGGGTGTCCCCCTAGGGCTACAGCTGCTCTCAAGGTCACTTCCTCTCACACAAACTCAGTAATTTTATaGCACTGGGGCAAGGAATTT +
Preference number: 2 (lower is better)
Translates to: PGCPPRATAALKVTSSHTNSVIL*HWGKEF
Trigger: AAATTCCTTGCCCCAGTGTCATAAAATTACTGAGTT...TGTGTGAGAGGAAGTGACCTTGAGAGCAGCTGTAGCCCTAGGGGGACACCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR GCA 90 bp TCAGTTTGGCTCTCTCTGGTGAATCCCACCCCCACACCATGTGATGCTCTGTGTAAAGGGTCACCTTTTTaGTCACCATTACATGCAGGC +
Preference number: 2 (lower is better)
Translates to: SVWLSLVNPTPTPCDALCKGSPF*SPLHAG
Trigger: GCCTGCATGTAATGGTGAGCAAAAAGGTGACCCTTT...ACACAGAGCATCACATGGTGTGGGGGTGGGATTCACCAGAGAGAGCCAAACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR GCA 90 bp TCAGTTTGGCTCTCTCTGGTGAATCCCACCCCCACACCATGTGATGCTCTGTGTAACATGCCAAGTTTGTaGTTGCCTTCTGGGTCTTTG +
Preference number: 2 (lower is better)
Translates to: SVWLSLVNPTPTPCDALCNMPSL*LPSGSL
Trigger: CAAAGACCCAGAAGGCAAGCACAAACTTGGCATGTT...ACACAGAGCATCACATGGTGTGGGGGTGGGATTCACCAGAGAGAGCCAAACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR TCA 90 bp TTAAACAGAAACCAGCCCTTTGGAAAGACCTGTTGCACCTCTGATTACAACCAAGATGGGAGAATTGCTTaGACCCGGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: LNRNQPFGKTCCTSDYNQDGRIA*TREAEV
Trigger: AACCTCCGCCTCCCGGGTTCAAGCAATTCTCCCATC...TTGGTTGTAATCAGAGGTGCAACAGGTCTTTCCAAAGGGCTGGTTTCTGTTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR TCA 90 bp GAGGCTGTGGCATCATACTTCAAGTCATATCCACGTCCAAAATCCTACCAGGAAACTTCTAGGCTCAAATaGTACCTCTGGCTCCGCCTC +
Preference number: 2 (lower is better)
Translates to: EAVASYFKSYPRPKSYQETSRLK*YLWLRL
Trigger: GAGGCGGAGCCAGAGGTATCATTTGAGCCTAGAAGT...TTCCTGGTAGGATTTTGGACGTGGATATGACTTGAAGTATGATGCCACAGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR GCA 90 bp ATACAAGGGGCTCAGATTCTGCATCTTCTCCCCCTGACATCCCAGACAAGTGATGGCCTTGCTTCAGACTaGAAAGACCCTTGTACCTTT +
Preference number: 2 (lower is better)
Translates to: IQGAQILHLLPLTSQTSDGLASD*KDPCTF
Trigger: AAAGGTACAAGGGTCTTTGCAGTCTGAAGCAAGGCC...ATCACTTGTCTGGGATGTCAGGGGGAGAAGATGCAGAATCTGAGCCCCTTGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CCA 90 bp ATACAAGGGGCTCAGATTCTGCATCTTCTCCCCCTGACATCCCAGACAAGTGATGGCAACACAGCACAGTaGAAGGAACACTATATGAGC +
Preference number: 2 (lower is better)
Translates to: IQGAQILHLLPLTSQTSDGNTAQ*KEHYMS
Trigger: GCTCATATAGTGTTCCTTCCACTGTGCTGTGTTGCC...ATCACTTGTCTGGGATGTCAGGGGGAGAAGATGCAGAATCTGAGCCCCTTGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CAA 90 bp GTAGTTCTCAGAATAGAACAGGGAGCCCAACCTGAGCTGAGCTTCTaGGGTACTCCTAAGAAAAACACTTCCCTGGAATCCATTCTCAGC +
Preference number: 2 (lower is better)
Translates to: VVLRIEQGAQPELSF*GTPKKNTSLESILS
Trigger: GCTGAGAATGGATTCCAGGGAAGTGTTTTTCTTAGGAGTACCCAAGAAGCTCAGCTCAGGTTGGGCTCCCTGTTCTATTCTGAGAACTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR TCA 90 bp GAGGCTGTGGCATCATACTTCAAGTCATATCCACGTCCAAAATCCTACCAGGAAAAGGCTCCACTCTCATaGCCTAATCACCTCCCAAAG +
Preference number: 2 (lower is better)
Translates to: EAVASYFKSYPRPKSYQEKAPLS*PNHLPK
Trigger: CTTTGGGAGGTGATTAGGTCATGAGAGTGGAGCCTT...TTCCTGGTAGGATTTTGGACGTGGATATGACTTGAAGTATGATGCCACAGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR GCA 90 bp ATACAAGGGGCTCAGATTCTGCATCTTCTCCCCCTGACATCCCAGACAAGTGATCTCTCCTTTTCCCTCTaGCATGTAAGAAGTACCTTG +
Preference number: 2 (lower is better)
Translates to: IQGAQILHLLPLTSQTSDLSFSL*HVRSTL
Trigger: CAAGGTACTTCTTACATGGCAGAGGGAAAAGGAGAG...ATCACTTGTCTGGGATGTCAGGGGGAGAAGATGCAGAATCTGAGCCCCTTGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CCA 90 bp TCAGTTTGGCTCTCTCTGGTGAATCCCACCCCCACACCATGTGATGCTCTGTGTGTTCTCACTTGTAAGTaGGAGCTAAGCTATGTGTAT +
Preference number: 2 (lower is better)
Translates to: SVWLSLVNPTPTPCDALCVLTCK*ELSYVY
Trigger: ATACACATAGCTTAGCTCCCACTTACAAGTGAGAAC...ACACAGAGCATCACATGGTGTGGGGGTGGGATTCACCAGAGAGAGCCAAACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR TCA 90 bp GTGGTAGCCTCTTCTTCCCCACCATCTCATCAATTTATACGCATGATCTTATTTGGCCTCCCAAAGTGCTaGAATAGGCGTGTGCCACTA +
Preference number: 2 (lower is better)
Translates to: VVASSSPPSHQFIRMILFGLPKC*NRRVPL
Trigger: TAGTGGCACACGCCTATTTCAGCACTTTGGGAGGCC...AAATAAGATCATGCGTATAAATTGATGAGATGGTGGGGAAGAAGAGGCTACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR TCA 90 bp GGACAGTCAAGGACAGCGATGTGTAGGGAAAGTTTGGTTCATGCAAAAATGAATCTCCTAGAGGGAACTTaGGCACTCCTCATGACAGAG +
Preference number: 2 (lower is better)
Translates to: GQSRTAMCRESLVHAKMNLLEGT*ALLMTE
Trigger: CTCTGTCATGAGGAGTGCTCAAGTTCCCTCTAGGAG...ATTCATTTTTGCATGAACCAAACTTTCCCTACACATCGCTGTCCTTGACTGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR TCA 90 bp ATACAAGGGGCTCAGATTCTGCATCTTCTCCCCCTGACATCCCAGACAAGTGATCTATCAGTTCAAGGGTaGATATGCCTTCAGAATGCA +
Preference number: 2 (lower is better)
Translates to: IQGAQILHLLPLTSQTSDLSVQG*ICLQNA
Trigger: TGCATTCTGAAGGCATATTCACCCTTGAACTGATAG...ATCACTTGTCTGGGATGTCAGGGGGAGAAGATGCAGAATCTGAGCCCCTTGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR TCA 90 bp GAGGCTGTGGCATCATACTTCAAGTCATATCCACGTCCAAAATCCTACCAGGAAAACCTAAGTGCCCACTaGCCAATGAGTGGACAAAGA +
Preference number: 2 (lower is better)
Translates to: EAVASYFKSYPRPKSYQENLSAH*PMSGQR
Trigger: TCTTTGTCCACTCATTGGTCAGTGGGCACTTAGGTT...TTCCTGGTAGGATTTTGGACGTGGATATGACTTGAAGTATGATGCCACAGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR TCA 90 bp TCAGTTTGGCTCTCTCTGGTGAATCCCACCCCCACACCATGTGATGCTCTGTGTTCTTCCAGCTACAAATaGCTAAAATGCTCCATCATT +
Preference number: 2 (lower is better)
Translates to: SVWLSLVNPTPTPCDALCSSSYK*LKCSII
Trigger: AATGATGGAGCATTTTAGTCATTTGTAGCTGGAAGA...ACACAGAGCATCACATGGTGTGGGGGTGGGATTCACCAGAGAGAGCCAAACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CCA 90 bp GGACAGTCAAGGACAGCGATGTGTAGGGAAAGTTTGGTTCATGCAAAAATGAATTCAGAAGTTTGCTCATaGCTGGGCGTGGTGGCTCAT +
Preference number: 2 (lower is better)
Translates to: GQSRTAMCRESLVHAKMNSEVCS*LGVVAH
Trigger: ATGAGCCACCACGCCCAGCCATGAGCAAACTTCTGA...ATTCATTTTTGCATGAACCAAACTTTCCCTACACATCGCTGTCCTTGACTGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CCA 90 bp TTAAACAGAAACCAGCCCTTTGGAAAGACCTGTTGCACCTCTGATTACAACCAATTGGAGACTCAGAAGTaGGAGGATGGGAACGGGTCT +
Preference number: 2 (lower is better)
Translates to: LNRNQPFGKTCCTSDYNQLETQK*EDGNGS
Trigger: AGACCCGTTCCCATCCTCCCACTTCTGAGTCTCCAA...TTGGTTGTAATCAGAGGTGCAACAGGTCTTTCCAAAGGGCTGGTTTCTGTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CCA 90 bp TCAGTTTGGCTCTCTCTGGTGAATCCCACCCCCACACCATGTGATGCTCTGTGTATTTGTTTGAGGCTGTaGCATCATACTTCAAGTCAT +
Preference number: 2 (lower is better)
Translates to: SVWLSLVNPTPTPCDALCICLRL*HHTSSH
Trigger: ATGACTTGAAGTATGATGCCACAGCCTCAAACAAAT...ACACAGAGCATCACATGGTGTGGGGGTGGGATTCACCAGAGAGAGCCAAACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CAA 90 bp TTGCCTTCTGGGTCTTTGCCTTTATTATTCCTCCCCTCAGCCCACTaGTGGTTCCTTCTAATCCTTCACGTACCAGCTCAAATGTTTTCT +
Preference number: 2 (lower is better)
Translates to: LPSGSLPLLFLPSAH*WFLLILHVPAQMFS
Trigger: AGAAAACATTTGAGCTGGTACGTGAAGGATTAGAAGGAACCACAAGTGGGCTGAGGGGAGGAATAATAAAGGCAAAGACCCAGAAGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CAA 90 bp TCTAACTTCTCAAACATGCCAAGTTTGTGCTTGCCTTCTGGGTCTTaGCCTTTATTATTCCTCCCCTCAGCCCACTTGTGGTTCCTTCTA +
Preference number: 2 (lower is better)
Translates to: SNFSNMPSLCLPSGS*PLLFLPSAHLWFLL
Trigger: TAGAAGGAACCACAAGTGGGCTGAGGGGAGGAATAATAAAGGCAAAGACCCAGAAGGCAAGCACAAACTTGGCATGTTTGAGAAGTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CAA 90 bp CTAAGCTATGTGTATGCAAAGGCATACAGAGTGATATCATGGACTTaGGAGACTCAGAAGTGGGAGGATGGGAACGGGTCTAGGGATAAA +
Preference number: 2 (lower is better)
Translates to: LSYVYAKAYRVISWT*ETQKWEDGNGSRDK
Trigger: TTTATCCCTAGACCCGTTCCCATCCTCCCACTTCTGAGTCTCCAAAGTCCATGATATCACTCTGTATGCCTTTGCATACACATAGCTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CAA 90 bp GATGCGCTTTGTGTAATGTTGGGAGCAAGTAATGATTTTTCCTCTTaGTTCTTGTGGAGGGATGCTTTGGGTGCTCAGAGGAGCATTGAC +
Preference number: 2 (lower is better)
Translates to: DALCVMLGASNDFSS*FLWRDALGAQRSID
Trigger: GTCAATGCTCCTCTGAGCACCCAAAGCATCCCTCCACAAGAACAAAGAGGAAAAATCATTACTTGCTCCCAACATTACACAAAGCGCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CAA 90 bp ATAGTTTATGTGAAATGGGGAAGGCAAGTGGAGGGAGCTGACGTTTaGGACTCTGGACAGATACAATACATACCTGCTGCCAGGATGAAT +
Preference number: 2 (lower is better)
Translates to: IVYVKWGRQVEGADV*DSGQIQYIPAARMN
Trigger: ATTCATCCTGGCAGCAGGTATGTATTGTATCTGTCCAGAGTCCAAAACGTCAGCTCCCTCCACTTGCCTTCCCCATTTCACATAAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR TCA 90 bp ACCACTGTGCCTGGCCACCAGTACTTCTTACGTAATACTTGCTGTAGAGAATCTGCTCAGGCCTTCAAATaGAATGATGGTTCATGCTGT +
Preference number: 2 (lower is better)
Translates to: TTVPGHQYFLRNTCCRESAQAFK*NDGSCC
Trigger: ACAGCATGAACCATCATTTCATTTGAAGGCCTGAGC...AGATTCTCTACAGCAAGTATTACGTAAGAAGTACTGGTGGCCAGGCACAGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR TCA 90 bp ATACAAGGGGCTCAGATTCTGCATCTTCTCCCCCTGACATCCCAGACAAGTGATAGCATTTTGTCTATTTaGAAATTCAGGCTCAGGCCT +
Preference number: 2 (lower is better)
Translates to: IQGAQILHLLPLTSQTSDSILSI*KFRLRP
Trigger: AGGCCTGAGCCTGAATTTTCAAATAGACAAAATGCT...ATCACTTGTCTGGGATGTCAGGGGGAGAAGATGCAGAATCTGAGCCCCTTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR TCA 90 bp GAGGCTGTGGCATCATACTTCAAGTCATATCCACGTCCAAAATCCTACCAGGAACTGCTTTCTGGTTCATaGACAGTGGCTTCTTGCTTT +
Preference number: 2 (lower is better)
Translates to: EAVASYFKSYPRPKSYQELLSGS*TVASCF
Trigger: AAAGCAAGAAGCCACTGTTCATGAACCAGAAAGCAG...TTCCTGGTAGGATTTTGGACGTGGATATGACTTGAAGTATGATGCCACAGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR GCA 90 bp GTTTGTGGAGGGTCTGCTTTCTGGTTCATGAACAGTGGCTTCTTGCTTTGTCCTCTCTCCAGAGATCACTaGCAACAAAGTTATTACCTC +
Preference number: 2 (lower is better)
Translates to: VCGGSAFWFMNSGFLLCPLSRDH*QQSYYL
Trigger: GAGGTAATAACTTTGTTGGCAGTGATCTCTGGAGAG...AGGACAAAGCAAGAAGCCACTGTTCATGAACCAGAAAGCAGACCCTCCACAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR GCA 90 bp GAGGCTGTGGCATCATACTTCAAGTCATATCCACGTCCAAAATCCTACCAGGAATGTTTGTGGAGGGTCTaGTTTCTGGTTCATGAACAG +
Preference number: 2 (lower is better)
Translates to: EAVASYFKSYPRPKSYQECLWRV*FLVHEQ
Trigger: CTGTTCATGAACCAGAAAGCAGACCCTCCACAAACA...TTCCTGGTAGGATTTTGGACGTGGATATGACTTGAAGTATGATGCCACAGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CCA 90 bp TTAAACAGAAACCAGCCCTTTGGAAAGACCTGTTGCACCTCTGATTACAACCAAGGGCATCTGTACCAATaGAGGTCTGTAGCATCTGTC +
Preference number: 2 (lower is better)
Translates to: LNRNQPFGKTCCTSDYNQGHLYQ*RSVASV
Trigger: GACAGATGCTACAGACCTCCATTGGTACAGATGCCC...TTGGTTGTAATCAGAGGTGCAACAGGTCTTTCCAAAGGGCTGGTTTCTGTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CCA 90 bp TTAAACAGAAACCAGCCCTTTGGAAAGACCTGTTGCACCTCTGATTACAACCAAGAGAGGTGGGACTTCTaGGAGGTGATTGGTTCACAA +
Preference number: 2 (lower is better)
Translates to: LNRNQPFGKTCCTSDYNQERWDF*EVIGSQ
Trigger: TTGTGAACCAATCACCTCCCAGAAGTCCCACCTCTC...TTGGTTGTAATCAGAGGTGCAACAGGTCTTTCCAAAGGGCTGGTTTCTGTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CAA 90 bp AATTGGGCATGGATGTTAATGTATACTCATATGTGCCCACAACAGTaGGAGCCTTGGGAACAAGGAAGTTACACTGCCTCGGCAAAGAAA +
Preference number: 2 (lower is better)
Translates to: NWAWMLMYTHMCPQQ*EPWEQGSYTASAKK
Trigger: TTTCTTTGCCGAGGCAGTGTAACTTCCTTGTTCCCAAGGCTCCAACTGTTGTGGGCACATATGAGTATACATTAACATCCATGCCCAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR TCA 90 bp AGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATGGATGTTAATGTATGGTAAGGGCTGGGGATaGGGGGTGCACTTAAACCAG +
Preference number: 2 (lower is better)
Translates to: STHVGKTVIINWAWMLMYGKGWG*GVHLNQ
Trigger: CTGGTTTAAGTGCACCCCTCATCCCCAGCCCTTACC...ATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR TCA 90 bp TTAAACAGAAACCAGCCCTTTGGAAAGACCTGTTGCACCTCTGATTACAACCAATTGGTCTCAATCTCTTaGCCTCAGGTGATCCATCCA +
Preference number: 2 (lower is better)
Translates to: LNRNQPFGKTCCTSDYNQLVSIS*PQVIHP
Trigger: TGGATGGATCACCTGAGGTCAAGAGATTGAGACCAA...TTGGTTGTAATCAGAGGTGCAACAGGTCTTTCCAAAGGGCTGGTTTCTGTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR GCA 90 bp GTGGTAGCCTCTTCTTCCCCACCATCTCATCAATTTATACGCATGATCTTATTTACATATTGCCCAGGCTaGTCTCGAACTTCTAGGCTC +
Preference number: 2 (lower is better)
Translates to: VVASSSPPSHQFIRMILFTYCPG*SRTSRL
Trigger: GAGCCTAGAAGTTCGAGAGCAGCCTGGGCAATATGT...AAATAAGATCATGCGTATAAATTGATGAGATGGTGGGGAAGAAGAGGCTACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CCA 90 bp TTAAACAGAAACCAGCCCTTTGGAAAGACCTGTTGCACCTCTGATTACAACCAAAGGGTTTCACCATGTTaGCCAGGTTGGTCTCAATCT +
Preference number: 2 (lower is better)
Translates to: LNRNQPFGKTCCTSDYNQRVSPC*PGWSQS
Trigger: AGATTGAGACCAACCTGGCCAACATGGTGAAACCCT...TTGGTTGTAATCAGAGGTGCAACAGGTCTTTCCAAAGGGCTGGTTTCTGTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CCA 90 bp GAGGCTGTGGCATCATACTTCAAGTCATATCCACGTCCAAAATCCTACCAGGAAGCCAGATTTAAATGTTaGCCTCTGCTACTTCCTTGT +
Preference number: 2 (lower is better)
Translates to: EAVASYFKSYPRPKSYQEARFKC*PLLLPC
Trigger: ACAAGGAAGTAGCAGAGGCCAACATTTAAATCTGGC...TTCCTGGTAGGATTTTGGACGTGGATATGACTTGAAGTATGATGCCACAGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CCA 90 bp TTAAACAGAAACCAGCCCTTTGGAAAGACCTGTTGCACCTCTGATTACAACCAACATGTGTTGGAAATTTaGTCCCCAGTGCAGCAGTGT +
Preference number: 2 (lower is better)
Translates to: LNRNQPFGKTCCTSDYNQHVLEI*SPVQQC
Trigger: ACACTGCTGCACTGGGGACCAAATTTCCAACACATG...TTGGTTGTAATCAGAGGTGCAACAGGTCTTTCCAAAGGGCTGGTTTCTGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CAA 90 bp CTAGGAAATTCCTGGCAATGCAATCTAATTTCTTCACTCCTCATCTaGAGGGGTAAGTGGGCAAACATCAAGAACACTGGCTTATCAGCA +
Preference number: 2 (lower is better)
Translates to: LGNSWQCNLISSLLI*RGKWANIKNTGLSA
Trigger: TGCTGATAAGCCAGTGTTCTTGATGTTTGCCCACTTACCCCTCAAGATGAGGAGTGAAGAAATTAGATTGCATTGCCAGGAATTTCCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR TCA 90 bp ACAGTTAAATGGTTAAATGACTACCTACTTCAATGTGCTTTCTGGCAGCCAGAACACTTAAACCAGAAATaGGACATGGCCCTCTGTGGC +
Preference number: 2 (lower is better)
Translates to: TVKWLNDYLLQCAFWQPEHLNQK*DMALCG
Trigger: GCCACAGAGGGCCATGTCTCATTTCTGGTTTAAGTG...TTCTGGCTGCCAGAAAGCACATTGAAGTAGGTAGTCATTTAACCATTTAACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR TCA 90 bp CCACTGACCAATGAGTGGACAAAGAAAGTGTGGTATATATACACACCACGGAATTTCAGGACGCATCACTaGGTAGTGCACAGTTTTAGT +
Preference number: 2 (lower is better)
Translates to: PLTNEWTKKVWYIYTPRNFRTHH*VVHSFS
Trigger: ACTAAAACTGTGCACTACTCAGTGATGCGTCCTGAA...ATTCCGTGGTGTGTATATATACCACACTTTCTTTGTCCACTCATTGGTCAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR TCA 90 bp TTAAACAGAAACCAGCCCTTTGGAAAGACCTGTTGCACCTCTGATTACAACCAATCCCTTTTTGCTCTTTaGCAACTGACCAGCATTCCT +
Preference number: 2 (lower is better)
Translates to: LNRNQPFGKTCCTSDYNQSLFAL*QLTSIP
Trigger: AGGAATGCTGGTCAGTTGTCAAAGAGCAAAAAGGGA...TTGGTTGTAATCAGAGGTGCAACAGGTCTTTCCAAAGGGCTGGTTTCTGTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR GCA 90 bp AGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATGGATGTTAATGTATCTGCCATCTGGGCCTTaGTTCAGACTGCAAAGACCC +
Preference number: 2 (lower is better)
Translates to: STHVGKTVIINWAWMLMYLPSGP*FRLQRP
Trigger: GGGTCTTTGCAGTCTGAAGCAAGGCCCAGATGGCAG...ATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR GCA 90 bp AGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATGGATGTTAATGTATGCTGCGGCTGTGCTCTaGACTTCTGTGTACGTCGAA +
Preference number: 2 (lower is better)
Translates to: STHVGKTVIINWAWMLMYAAAVL*TSVYVE
Trigger: TTCGACGTACACAGAAGTGCAGAGCACAGCCGCAGC...ATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CCA 90 bp ATACAAGGGGCTCAGATTCTGCATCTTCTCCCCCTGACATCCCAGACAAGTGATACAGGCCAGTATGTATaGTATGATCACATTAATGTA +
Preference number: 2 (lower is better)
Translates to: IQGAQILHLLPLTSQTSDTGQYV*YDHINV
Trigger: TACATTAATGTGATCATACCATACATACTGGCCTGT...ATCACTTGTCTGGGATGTCAGGGGGAGAAGATGCAGAATCTGAGCCCCTTGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CCA 90 bp GTTTGTGGAGGGTCTGCTTTCTGGTTCATGAACAGTGGCTTCTTGCTTTGTCCTTTAGCCATTGGCATTTaGTCAGTATGTGTATGTAGT +
Preference number: 2 (lower is better)
Translates to: VCGGSAFWFMNSGFLLCPLAIGI*SVCVCS
Trigger: ACTACATACACATACTGACCAAATGCCAATGGCTAA...AGGACAAAGCAAGAAGCCACTGTTCATGAACCAGAAAGCAGACCCTCCACAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR TCA 90 bp ACCACTGTGCCTGGCCACCAGTACTTCTTACGTAATACTTGCTGTAGAGAATCTAAATCATATAATAGCTaGCCTGGTATCGAATGCTGT +
Preference number: 2 (lower is better)
Translates to: TTVPGHQYFLRNTCCRESKSYNS*PGIECC
Trigger: ACAGCATTCGATACCAGGTCAGCTATTATATGATTT...AGATTCTCTACAGCAAGTATTACGTAAGAAGTACTGGTGGCCAGGCACAGTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR TCA 90 bp GGACAGTCAAGGACAGCGATGTGTAGGGAAAGTTTGGTTCATGCAAAAATGAATCATATACAAAGCTGCTaGGAAACAGCCTCAACAATG +
Preference number: 2 (lower is better)
Translates to: GQSRTAMCRESLVHAKMNHIQSC*ETASTM
Trigger: CATTGTTGAGGCTGTTTCTCAGCAGCTTTGTATATG...ATTCATTTTTGCATGAACCAAACTTTCCCTACACATCGCTGTCCTTGACTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR GCA 90 bp GTTTGTGGAGGGTCTGCTTTCTGGTTCATGAACAGTGGCTTCTTGCTTTGTCCTTTGCTCACCATTACATaGAGGCATCTAAAAATACTT +
Preference number: 2 (lower is better)
Translates to: VCGGSAFWFMNSGFLLCPLLTIT*RHLKIL
Trigger: AAGTATTTTTAGATGCCTGCATGTAATGGTGAGCAA...AGGACAAAGCAAGAAGCCACTGTTCATGAACCAGAAAGCAGACCCTCCACAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR GCA 90 bp AGAGGAATTATACAATATCTGTTCTTTTGTGGCTGGCTTATTTCACTCAGCATACCCTGTACGATCAGCTaGGAAAGAACTGCCAGTGCA +
Preference number: 2 (lower is better)
Translates to: RGIIQYLFFCGWLISLSIPCTIS*ERTASA
Trigger: TGCACTGGCAGTTCTTTCGCAGCTGATCGTACAGGG...TATGCTGAGTGAAATAAGCCAGCCACAAAAGAACAGATATTGTATAATTCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CCA 90 bp AGAGGAATTATACAATATCTGTTCTTTTGTGGCTGGCTTATTTCACTCAGCATACTCAGGAGGCTGAGATaGGAGAATTGCTTGAACCCG +
Preference number: 2 (lower is better)
Translates to: RGIIQYLFFCGWLISLSILRRLR*ENCLNP
Trigger: CGGGTTCAAGCAATTCTCCCATCTCAGCCTCCTGAG...TATGCTGAGTGAAATAAGCCAGCCACAAAAGAACAGATATTGTATAATTCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CCA 90 bp GTGGTAGCCTCTTCTTCCCCACCATCTCATCAATTTATACGCATGATCTTATTTCAGCAATCCTACTACTaGGTATCTACCCAAAGGAAG +
Preference number: 2 (lower is better)
Translates to: VVASSSPPSHQFIRMILFQQSYY*VSTQRK
Trigger: CTTCCTTTGGGTAGATACCCAGTAGTAGGATTGCTG...AAATAAGATCATGCGTATAAATTGATGAGATGGTGGGGAAGAAGAGGCTACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR TCA 90 bp AGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATGGATGTTAATGTATCTTCACTCCTCATCTTaGGGGGTAAGTGGGCAAACA +
Preference number: 2 (lower is better)
Translates to: STHVGKTVIINWAWMLMYLHSSS*GVSGQT
Trigger: TGTTTGCCCACTTACCCCTCAAGATGAGGAGTGAAG...ATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CCA 90 bp ACAGTTAAATGGTTAAATGACTACCTACTTCAATGTGCTTTCTGGCAGCCAGAAAGCCAATCAGTGTGCTaGCATATTTGGTGTTTGTGG +
Preference number: 2 (lower is better)
Translates to: TVKWLNDYLLQCAFWQPESQSVC*HIWCLW
Trigger: CCACAAACACCAAATATGCCAGCACACTGATTGGCT...TTCTGGCTGCCAGAAAGCACATTGAAGTAGGTAGTCATTTAACCATTTAACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CCA 90 bp AGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATGGATGTTAATGTATCCATGTTGGCCAGGTTaGTCTCAATCTCTTGACCTC +
Preference number: 2 (lower is better)
Translates to: STHVGKTVIINWAWMLMYPCWPG*SQSLDL
Trigger: GAGGTCAAGAGATTGAGACCAACCTGGCCAACATGG...ATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR TCA 90 bp ACAGTTAAATGGTTAAATGACTACCTACTTCAATGTGCTTTCTGGCAGCCAGAAAAGCAAGCAAGCACATaGTCAGAAGAGAAAAAGAGC +
Preference number: 2 (lower is better)
Translates to: TVKWLNDYLLQCAFWQPEKQAST*SEEKKS
Trigger: GCTCTTTTTCTCTTCTGATCATGTGCTTGCTTGCTT...TTCTGGCTGCCAGAAAGCACATTGAAGTAGGTAGTCATTTAACCATTTAACTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR GCA 90 bp AGAGGAATTATACAATATCTGTTCTTTTGTGGCTGGCTTATTTCACTCAGCATACTGGCAGCCAGAATCTaGATGCAATCAATGACCATG +
Preference number: 2 (lower is better)
Translates to: RGIIQYLFFCGWLISLSILAARI*MQSMTM
Trigger: CATGGTCATTGATTGCATGCAGATTCTGGCTGCCAG...TATGCTGAGTGAAATAAGCCAGCCACAAAAGAACAGATATTGTATAATTCCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR GCA 90 bp TTAAACAGAAACCAGCCCTTTGGAAAGACCTGTTGCACCTCTGATTACAACCAAATTTGTTTTACTGTCTaGCTCCTTCATCAGATGATG +
Preference number: 2 (lower is better)
Translates to: LNRNQPFGKTCCTSDYNQICFTV*LLHQMM
Trigger: CATCATCTGATGAAGGAGGCAGACAGTAAAACAAAT...TTGGTTGTAATCAGAGGTGCAACAGGTCTTTCCAAAGGGCTGGTTTCTGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CCA 90 bp AGAGGAATTATACAATATCTGTTCTTTTGTGGCTGGCTTATTTCACTCAGCATATATAGTTCTGGAGGCTaGGAAGCCAATCAGTGTGCT +
Preference number: 2 (lower is better)
Translates to: RGIIQYLFFCGWLISLSIYSSGG*EANQCA
Trigger: AGCACACTGATTGGCTTCCCAGCCTCCAGAACTATA...TATGCTGAGTGAAATAAGCCAGCCACAAAAGAACAGATATTGTATAATTCCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR GCA 90 bp AGAGGAATTATACAATATCTGTTCTTTTGTGGCTGGCTTATTTCACTCAGCATAAAGTTGTGTACTACCTaGTCCTCAGCTTCAGCTTCA +
Preference number: 2 (lower is better)
Translates to: RGIIQYLFFCGWLISLSIKLCTT*SSASAS
Trigger: TGAAGCTGAAGCTGAGGAGCAGGTAGTACACAACTT...TATGCTGAGTGAAATAAGCCAGCCACAAAAGAACAGATATTGTATAATTCCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CCA 90 bp TTAAACAGAAACCAGCCCTTTGGAAAGACCTGTTGCACCTCTGATTACAACCAAAGTTTCAAATGCTACTaGATAGAATTTGATCCAGCA +
Preference number: 2 (lower is better)
Translates to: LNRNQPFGKTCCTSDYNQSFKCY*IEFDPA
Trigger: TGCTGGATCAAATTCTATCCAGTAGCATTTGAAACT...TTGGTTGTAATCAGAGGTGCAACAGGTCTTTCCAAAGGGCTGGTTTCTGTTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CCA 90 bp AGAGGAATTATACAATATCTGTTCTTTTGTGGCTGGCTTATTTCACTCAGCATACAGGAAACTTCACAATaGTGCACAGTCCATACTCCA +
Preference number: 2 (lower is better)
Translates to: RGIIQYLFFCGWLISLSIQETSQ*CTVHTP
Trigger: TGGAGTATGGACTGTGCACCATTGTGAAGTTTCCTG...TATGCTGAGTGAAATAAGCCAGCCACAAAAGAACAGATATTGTATAATTCCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR TCA 90 bp ACAGTTAAATGGTTAAATGACTACCTACTTCAATGTGCTTTCTGGCAGCCAGAAATGCCCTTTCACATATaGTTCCAAAGTGTACATATC +
Preference number: 2 (lower is better)
Translates to: TVKWLNDYLLQCAFWQPEMPFHI*FQSVHI
Trigger: GATATGTACACTTTGGAATCATATGTGAAAGGGCAT...TTCTGGCTGCCAGAAAGCACATTGAAGTAGGTAGTCATTTAACCATTTAACTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR TCA 90 bp ACAGTTAAATGGTTAAATGACTACCTACTTCAATGTGCTTTCTGGCAGCCAGAATACTTAGGCCCAAAATaGCAGGCTGAATACTTTTAT +
Preference number: 2 (lower is better)
Translates to: TVKWLNDYLLQCAFWQPEYLGPK*QAEYFY
Trigger: ATAAAAGTATTCAGCCTGTCATTTTGGGCCTAAGTA...TTCTGGCTGCCAGAAAGCACATTGAAGTAGGTAGTCATTTAACCATTTAACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CCA 90 bp ACAGTTAAATGGTTAAATGACTACCTACTTCAATGTGCTTTCTGGCAGCCAGAATTTGTGCTTGCCTTCTaGGTCTTTGCCTTTATTATT +
Preference number: 2 (lower is better)
Translates to: TVKWLNDYLLQCAFWQPEFVLAF*VFAFII
Trigger: AATAATAAAGGCAAAGACCCAGAAGGCAAGCACAAA...TTCTGGCTGCCAGAAAGCACATTGAAGTAGGTAGTCATTTAACCATTTAACTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR GCA 90 bp TACATATCCAAATTCCTACTTTACCTCTCCAGAGATCACTGCCAACAAAGTTATAAACAGCCTCAACAATaGCAATCAAAGAGCAAAACA +
Preference number: 2 (lower is better)
Translates to: YISKFLLYLSRDHCQQSYKQPQQ*QSKSKT
Trigger: TGTTTTGCTCTTTGATTGGCATTGTTGAGGCTGTTT...ATAACTTTGTTGGCAGTGATCTCTGGAGAGGTAAAGTAGGAATTTGGATATGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CCA 90 bp AGAGGAATTATACAATATCTGTTCTTTTGTGGCTGGCTTATTTCACTCAGCATACATTCACCTATCCATTaGCCATGGTTACTATCATTG +
Preference number: 2 (lower is better)
Translates to: RGIIQYLFFCGWLISLSIHSPIH*PWLLSL
Trigger: CAATGATAGTAACCATGGCCAATGGATAGGTGAATG...TATGCTGAGTGAAATAAGCCAGCCACAAAAGAACAGATATTGTATAATTCCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR TCA 90 bp AGAGGAATTATACAATATCTGTTCTTTTGTGGCTGGCTTATTTCACTCAGCATAGAAAAACATTATAACTaGGTTCACAGCAGCCTTCTT +
Preference number: 2 (lower is better)
Translates to: RGIIQYLFFCGWLISLSIEKHYN*VHSSLL
Trigger: AAGAAGGCTGCTGTGAACTCAGTTATAATGTTTTTC...TATGCTGAGTGAAATAAGCCAGCCACAAAAGAACAGATATTGTATAATTCCTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR TCA 90 bp AGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATGGATGTTAATGTATGAATTCAGAATGAACTaGCATTCAGCATTAACCTGT +
Preference number: 2 (lower is better)
Translates to: STHVGKTVIINWAWMLMYEFRMN*HSALTC
Trigger: ACAGGTTAATGCTGAATGTCAGTTCATTCTGAATTC...ATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR GCA 90 bp AGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATGGATGTTAATGTATAGCAGTGGTAGAGAATaGCTTATTTTCATCCTTATG +
Preference number: 2 (lower is better)
Translates to: STHVGKTVIINWAWMLMYSSGRE*LIFILM
Trigger: CATAAGGATGAAAATAAGGCATTCTCTACCACTGCT...ATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR GCA 90 bp AGAGGAATTATACAATATCTGTTCTTTTGTGGCTGGCTTATTTCACTCAGCATAGCCTTTTTGATCTATTaGCAATGCTTTCACCTTTTG +
Preference number: 2 (lower is better)
Translates to: RGIIQYLFFCGWLISLSIAFLIY*QCFHLL
Trigger: CAAAAGGTGAAAGCATTGGCAATAGATCAAAAAGGC...TATGCTGAGTGAAATAAGCCAGCCACAAAAGAACAGATATTGTATAATTCCTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR GCA 90 bp AGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATGGATGTTAATGTATTGCAACCTCGTAAGTTaGTTCCTGTTCTATAATTTA +
Preference number: 2 (lower is better)
Translates to: STHVGKTVIINWAWMLMYCNLVS*FLFYNL
Trigger: TAAATTATAGAACAGGAAGCAACTTACGAGGTTGCA...ATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR GCA 90 bp AGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATGGATGTTAATGTATGCTTTTGGAGAAACTTaGCCTTATATACTCTCTTAT +
Preference number: 2 (lower is better)
Translates to: STHVGKTVIINWAWMLMYAFGET*PYILSY
Trigger: ATAAGAGAGTATATAAGGGCAAGTTTCTCCAAAAGC...ATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CAA 90 bp CCTGGGTGTCCCCCTAGGGCTACAGCTGCTCTCAAGGTCACTTCCTCTCACACAAGATGGGAGAATTGCTaGAACCCGGGAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: PGCPPRATAALKVTSSHTRWENC*NPGGGG
Trigger: ACCTCCGCCTCCCGGGTTCAAGCAATTCTCCCATCT...TGTGTGAGAGGAAGTGACCTTGAGAGCAGCTGTAGCCCTAGGGGGACACCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR TCA 72 bp TGGGAATGCAGCCATACCGGGTGTCAGAGCATGTTGTaGGCACCTCTACCTGGGTGTCCCCCTAGGGCTACA +
Preference number: 3 (lower is better)
Translates to: WECSHTGCQSML*APLPGCPPRAT
Trigger: TGTAGCCCTAGGGGGACACCCAGGTAGAGGTGCTCACAACATGCTCTGACACCCGGTATGGCTGCATTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CCA 72 bp GGTCCCCAGTGCAGCAGTGTTGAGAGGTGGGACTTCTaGGAGGTGATTGGTTCACAAGAGCTCTGCCCTCAT +
Preference number: 3 (lower is better)
Translates to: GPQCSSVERWDF*EVIGSQELCPH
Trigger: ATGAGGGCAGAGCTCTTGTGAACCAATCACCTCCCAGAAGTCCCACCTCTCAACACTGCTGCACTGGGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CAA 90 bp CCTGGGTGTCCCCCTAGGGCTACAGCTGCTCTCAAGGTCACTTCCTCTCACACATGGCATATTTGGTGTTaGTGGAGGGTCTGCTTTCTG +
Preference number: 3 (lower is better)
Translates to: PGCPPRATAALKVTSSHTWHIWC*WRVCFL
Trigger: CAGAAAGCAGACCCTCCACAAACACCAAATATGCCA...TGTGTGAGAGGAAGTGACCTTGAGAGCAGCTGTAGCCCTAGGGGGACACCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CAA 90 bp CCTGGGTGTCCCCCTAGGGCTACAGCTGCTCTCAAGGTCACTTCCTCTCACACAATTCAAACCCCAGATTaGTTTGAGGCTGTGGCATCA +
Preference number: 3 (lower is better)
Translates to: PGCPPRATAALKVTSSHTIQTPD*FEAVAS
Trigger: TGATGCCACAGCCTCAAACAAATCTGGGGTTTGAAT...TGTGTGAGAGGAAGTGACCTTGAGAGCAGCTGTAGCCCTAGGGGGACACCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR TCA 72 bp CAGCAGCAGAGGCATTCATTCTCCAAGGGTGTTCTATaGGCCTTATTGGTCCTCCCTGTACGATCAGCTGCG +
Preference number: 3 (lower is better)
Translates to: QQQRHSFSKGVL*ALLVLPVRSAA
Trigger: CGCAGCTGATCGTACAGGGAGGACCAATAAGGCTCATAGAACACCCTTGGAGAATGAATGCCTCTGCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR GCA 72 bp CCCGAAAAGTTCATGTGTTGGAAATTTGGTCCCCAGTaGAGCAGTGTTGAGAGGTGGGACTTCTGGGAGGTG +
Preference number: 3 (lower is better)
Translates to: PEKFMCWKFGPQ*SSVERWDFWEV
Trigger: CACCTCCCAGAAGTCCCACCTCTCAACACTGCTGCACTGGGGACCAAATTTCCAACACATGAACTTTTCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CCA 72 bp TGTTTGTGGAGGGTCTGCTTTCTGGTTCATGAACAGTaGCTTCTTGCTTTGTCCTCACGTGGTGGTTGGGGC +
Preference number: 3 (lower is better)
Translates to: CLWRVCFLVHEQ*LLALSSRGGWG
Trigger: GCCCCAACCACCACGTGAGGACAAAGCAAGAAGCCACTGTTCATGAACCAGAAAGCAGACCCTCCACAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CCA 72 bp TGGAAATTTGGTCCCCAGTGCAGCAGTGTTGAGAGGTaGGACTTCTGGGAGGTGATTGGTTCACAAGAGCTC +
Preference number: 3 (lower is better)
Translates to: WKFGPQCSSVER*DFWEVIGSQEL
Trigger: GAGCTCTTGTGAACCAATCACCTCCCAGAAGTCCCACCTCTCAACACTGCTGCACTGGGGACCAAATTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR TCA 72 bp AGGGCATTAATCCCATTCATGAAGGCTCCACTCTCATaGCCTAATCACCTCCCAAAGGCCCCACATCCTGTC +
Preference number: 3 (lower is better)
Translates to: RALIPFMKAPLS*PNHLPKAPHPV
Trigger: GACAGGATGTGGGGCCTTTGGGAGGTGATTAGGTCATGAGAGTGGAGCCTTCATGAATGGGATTAATGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR TCA 72 bp TATTGCCCAGGCTGCTCTCGAACTTCTAGGCTCAAATaGTACCTCTGGCTCCGCCTCTCAAAGTGTTGGGAT +
Preference number: 3 (lower is better)
Translates to: YCPGCSRTSRLK*YLWLRLSKCWD
Trigger: ATCCCAACACTTTGAGAGGCGGAGCCAGAGGTATCATTTGAGCCTAGAAGTTCGAGAGCAGCCTGGGCAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR GCA 72 bp AAGGTCAAATTTTCCCCTCCTAGCCATCACAAGTTCTaGCATCTGGGCCTTGCTTCAGACTGCAAAGACCCT +
Preference number: 3 (lower is better)
Translates to: KVKFSPPSHHKF*HLGLASDCKDP
Trigger: AGGGTCTTTGCAGTCTGAAGCAAGGCCCAGATGGCAGAACTTGTGATGGCTAGGAGGGGAAAATTTGACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR GCA 72 bp CACAATGGTGCACAGTCCATACTCCATGAAACTTTCTaGTTAAGTAGCCCCCACAACCCTCAGCCTCTTGGT +
Preference number: 3 (lower is better)
Translates to: HNGAQSILHETF*LSSPHNPQPLG
Trigger: ACCAAGAGGCTGAGGGTTGTGGGGGCTACTTAAGCAGAAAGTTTCATGGAGTATGGACTGTGCACCATTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CCA 72 bp TGGAGGCTGGGAAGCCAATCAGTGTGCTGGCATATTTaGTGTTTGTGGAGGGTCTGCTTTCTGGTTCATGAA +
Preference number: 3 (lower is better)
Translates to: WRLGSQSVCWHI*CLWRVCFLVHE
Trigger: TTCATGAACCAGAAAGCAGACCCTCCACAAACACCAAATATGCCAGCACACTGATTGGCTTCCCAGCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CCA 72 bp GGCATTCATTCTCCAAGGGTGTTCTATGAGCCTTATTaGTCCTCCCTGTACGATCAGCTGCGAAAGAACTGC +
Preference number: 3 (lower is better)
Translates to: GIHSPRVFYEPY*SSLYDQLRKNC
Trigger: GCAGTTCTTTCGCAGCTGATCGTACAGGGAGGACCAATAAGGCTCATAGAACACCCTTGGAGAATGAATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CCA 72 bp TGTGAAAGAGCAACCCAGAAGTTAGTCCATGTTTGGTaGAAAGGGGTCCTCAGCACCCTCATAGGTCATGCA +
Preference number: 3 (lower is better)
Translates to: CERATQKLVHVW*KGVLSTLIGHA
Trigger: TGCATGACCTATGAGGGTGCTGAGGACCCCTTTCCACCAAACATGGACTAACTTCTGGGTTGCTCTTTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR TCA 72 bp TATTTGGTGTTTGTGGAGGGTCTGCTTTCTGGTTCATaGACAGTGGCTTCTTGCTTTGTCCTCACGTGGTGG +
Preference number: 3 (lower is better)
Translates to: YLVFVEGLLSGS*TVASCFVLTWW
Trigger: CCACCACGTGAGGACAAAGCAAGAAGCCACTGTTCATGAACCAGAAAGCAGACCCTCCACAAACACCAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR TCA 72 bp TACAGAGACCCCACTAGCAAGAAGGCCCTCACTAGATaGGAACCCTTGACCTTGTACTTCCCAGCATCTAAA +
Preference number: 3 (lower is better)
Translates to: YRDPTSKKALTR*EPLTLYFPASK
Trigger: TTTAGATGCTGGGAAGTACAAGGTCAAGGGTTCTCATCTAGTGAGGGCCTTCTTGCTAGTGGGGTCTCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR GCA 72 bp ACAACAGTTGGAGCCTTGGGAACAAGGAAGTTACACTaGCTCGGCAAAGAAAGTGCTTTTCTCCACTGGAAC +
Preference number: 3 (lower is better)
Translates to: TTVGALGTRKLH*LGKESAFLHWN
Trigger: GTTCCAGTGGAGAAAAGCACTTTCTTTGCCGAGGCAGTGTAACTTCCTTGTTCCCAAGGCTCCAACTGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CCA 72 bp GCTGGCATATTTGGTGTTTGTGGAGGGTCTGCTTTCTaGTTCATGAACAGTGGCTTCTTGCTTTGTCCTCAC +
Preference number: 3 (lower is better)
Translates to: AGIFGVCGGSAF*FMNSGFLLCPH
Trigger: GTGAGGACAAAGCAAGAAGCCACTGTTCATGAACCAGAAAGCAGACCCTCCACAAACACCAAATATGCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CCA 72 bp ACTCTACATCATTTTGGAGTCCAAGTAAACCTGCTGTaGGACAACCCTTGCCACCCCACTCAAGCTACAGTT +
Preference number: 3 (lower is better)
Translates to: TLHHFGVQVNLL*DNPCHPTQATV
Trigger: AACTGTAGCTTGAGTGGGGTGGCAAGGGTTGTCCCACAGCAGGTTTACTTGGACTCCAAAATGATGTAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CCA 72 bp TGGTTTCTGCAAAGCTGTGGTAGCTGGCTCTTTAACTaGTTCAGACTCTACTATCTTGGAGGACTGCAGGTG +
Preference number: 3 (lower is better)
Translates to: WFLQSCGSWLFN*FRLYYLGGLQV
Trigger: CACCTGCAGTCCTCCAAGATAGTAGAGTCTGAACCAGTTAAAGAGCCAGCTACCACAGCTTTGCAGAAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CAA 90 bp GTTTGTGGAGGGTCTGCTTTCTGGTTCATGAACAGTGGCTTCTTGCTTTGTCCTTCAAACATGCCAAGTTaGTGCTTGCCTTCTGGGTCT +
Preference number: 3 (lower is better)
Translates to: VCGGSAFWFMNSGFLLCPSNMPS*CLPSGS
Trigger: AGACCCAGAAGGCAAGCACAAACTTGGCATGTTTGA...AGGACAAAGCAAGAAGCCACTGTTCATGAACCAGAAAGCAGACCCTCCACAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CAA 90 bp TTAAACAGAAACCAGCCCTTTGGAAAGACCTGTTGCACCTCTGATTACAACCAATGGGGTTTAGACATATaGCCCAGGCTGCTCTCGAAC +
Preference number: 3 (lower is better)
Translates to: LNRNQPFGKTCCTSDYNQWGLDI*PRLLSN
Trigger: GTTCGAGAGCAGCCTGGGCAATATGTCTAAACCCCA...TTGGTTGTAATCAGAGGTGCAACAGGTCTTTCCAAAGGGCTGGTTTCTGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR TCA 72 bp TTGTGTCCTCTGCTTCACCTTTTGATGTCAGAGGGCTaGAAATCCCACCCTTGGATCATGCTAACACCACTA +
Preference number: 3 (lower is better)
Translates to: LCPLLHLLMSEG*KSHPWIMLTPL
Trigger: TAGTGGTGTTAGCATGATCCAAGGGTGGGATTTTCAGCCCTCTGACATCAAAAGGTGAAGCAGAGGACACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR GCA 72 bp TCAGTGTGCTGGCATATTTGGTGTTTGTGGAGGGTCTaGTTTCTGGTTCATGAACAGTGGCTTCTTGCTTTG +
Preference number: 3 (lower is better)
Translates to: SVCWHIWCLWRV*FLVHEQWLLAL
Trigger: CAAAGCAAGAAGCCACTGTTCATGAACCAGAAAGCAGACCCTCCACAAACACCAAATATGCCAGCACACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR GCA 72 bp TCTATGAGCCTTATTGGTCCTCCCTGTACGATCAGCTaGGAAAGAACTGCCAGTGCAATCTTGAGACTAGAT +
Preference number: 3 (lower is better)
Translates to: SMSLIGPPCTIS*ERTASAILRLD
Trigger: ATCTAGTCTCAAGATTGCACTGGCAGTTCTTTCGCAGCTGATCGTACAGGGAGGACCAATAAGGCTCATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR GCA 72 bp GAGTTAAACAGAAACCAGCCCTTTGGAAAGACCTGTTaGACCTCTGATTACAACCAACCTCATGACTACCCC +
Preference number: 3 (lower is better)
Translates to: ELNRNQPFGKTC*TSDYNQPHDYP
Trigger: GGGGTAGTCATGAGGTTGGTTGTAATCAGAGGTGCAACAGGTCTTTCCAAAGGGCTGGTTTCTGTTTAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CAA 90 bp AGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATGGATGTTAATGTATGCTGAGATGGGAGAATaGCTTGAACCCGGGAGGCGG +
Preference number: 3 (lower is better)
Translates to: STHVGKTVIINWAWMLMYAEMGE*LEPGRR
Trigger: CCGCCTCCCGGGTTCAAGCAATTCTCCCATCTCAGC...ATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR TCA 72 bp AGTTTATGTGAAATGGGGAAGGCAAGTGGAGGGAGCTaGCGTTTTGGACTCTGGACAGATACAATACATACC +
Preference number: 3 (lower is better)
Translates to: SLCEMGKASGGS*RFGLWTDTIHT
Trigger: GGTATGTATTGTATCTGTCCAGAGTCCAAAACGTCAGCTCCCTCCACTTGCCTTCCCCATTTCACATAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CCA 72 bp TCTTTGCCTTTATTATTCCTCCCCTCAGCCCACTTGTaGTTCCTTCTAATCCTTCACGTACCAGCTCAAATG +
Preference number: 3 (lower is better)
Translates to: SLPLLFLPSAHL*FLLILHVPAQM
Trigger: CATTTGAGCTGGTACGTGAAGGATTAGAAGGAACCACAAGTGGGCTGAGGGGAGGAATAATAAAGGCAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CCA 72 bp AGCTATGTGTATGCAAAGGCATACAGAGTGATATCATaGACTTTGGAGACTCAGAAGTGGGAGGATGGGAAC +
Preference number: 3 (lower is better)
Translates to: SYVYAKAYRVIS*TLETQKWEDGN
Trigger: GTTCCCATCCTCCCACTTCTGAGTCTCCAAAGTCCATGATATCACTCTGTATGCCTTTGCATACACATAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CCA 72 bp ATGTATACTCATATGTGCCCACAACAGTTGGAGCCTTaGGAACAAGGAAGTTACACTGCCTCGGCAAAGAAA +
Preference number: 3 (lower is better)
Translates to: MYTHMCPQQLEP*EQGSYTASAKK
Trigger: TTTCTTTGCCGAGGCAGTGTAACTTCCTTGTTCCCAAGGCTCCAACTGTTGTGGGCACATATGAGTATACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CCA 72 bp CACATTTGGTGTTCAGACACGTATAACCAAGTCTGTTaGAATGGATGGGGTGGGAATTCAGTGAAGGCCAAA +
Preference number: 3 (lower is better)
Translates to: HIWCSDTYNQVC*NGWGGNSVKAK
Trigger: TTTGGCCTTCACTGAATTCCCACCCCATCCATTCCAACAGACTTGGTTATACGTGTCTGAACACCAAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CAA 90 bp GTTTGTGGAGGGTCTGCTTTCTGGTTCATGAACAGTGGCTTCTTGCTTTGTCCTGCTGCTCTTAGAATTTaGGGAAATGATCTGCTTCTA +
Preference number: 3 (lower is better)
Translates to: VCGGSAFWFMNSGFLLCPAALRI*GNDLLL
Trigger: TAGAAGCAGATCATTTCCCAAAATTCTAAGAGCAGC...AGGACAAAGCAAGAAGCCACTGTTCATGAACCAGAAAGCAGACCCTCCACAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CAA 90 bp ATACAAGGGGCTCAGATTCTGCATCTTCTCCCCCTGACATCCCAGACAAGTGATGAGAAGTTAAGTAATTaGTCCATAAGTGACAGAGCT +
Preference number: 3 (lower is better)
Translates to: IQGAQILHLLPLTSQTSDEKLSN*SISDRA
Trigger: AGCTCTGTCACTTATGGACAAATTACTTAACTTCTC...ATCACTTGTCTGGGATGTCAGGGGGAGAAGATGCAGAATCTGAGCCCCTTGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR GCA 72 bp ACTGTGCCTGGCCACCAGTACTTCTTACGTAATACTTaGTGTAGAGAATCTCTTTCTACTCAAGGGAAGATG +
Preference number: 3 (lower is better)
Translates to: TVPGHQYFLRNT*CRESLSTQGKM
Trigger: CATCTTCCCTTGAGTAGAAAGAGATTCTCTACAGCAAGTATTACGTAAGAAGTACTGGTGGCCAGGCACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CCA 72 bp GGCCTTGCTTCAGACTGCAAAGACCCTTGTACCTTTTaGCTGAAGGTAAGAATTCAGAATGAACTGACATTC +
Preference number: 3 (lower is better)
Translates to: GLASDCKDPCTF*LKVRIQNELTF
Trigger: GAATGTCAGTTCATTCTGAATTCTTACCTTCAGCCAAAAGGTACAAGGGTCTTTGCAGTCTGAAGCAAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CCA 72 bp AAGTGCCCACTGACCAATGAGTGGACAAAGAAAGTGTaGTATATATACACACCACGGAATACTGTTCAGCCA +
Preference number: 3 (lower is better)
Translates to: KCPLTNEWTKKV*YIYTPRNTVQP
Trigger: TGGCTGAACAGTATTCCGTGGTGTGTATATATACCACACTTTCTTTGTCCACTCATTGGTCAGTGGGCACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CCA 72 bp AGCCTCCTGATCCAAGGCCACAAATTCTGTCACATTTaGTGTTCAGACACGTATAACCAAGTCTGTTGGAAT +
Preference number: 3 (lower is better)
Translates to: SLLIQGHKFCHI*CSDTYNQVCWN
Trigger: ATTCCAACAGACTTGGTTATACGTGTCTGAACACCAAATGTGACAGAATTTGTGGCCTTGGATCAGGAGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CAA 90 bp ACAGTTAAATGGTTAAATGACTACCTACTTCAATGTGCTTTCTGGCAGCCAGAAATGAACAGTGGCTTCTaGCTTTGTCCTCACGTGGTG +
Preference number: 3 (lower is better)
Translates to: TVKWLNDYLLQCAFWQPEMNSGF*LCPHVV
Trigger: CACCACGTGAGGACAAAGCAAGAAGCCACTGTTCAT...TTCTGGCTGCCAGAAAGCACATTGAAGTAGGTAGTCATTTAACCATTTAACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR GCA 72 bp ACACTTCTAACTTCTCAAACATGCCAAGTTTGTGCTTaGCTTCTGGGTCTTTGCCTTTATTATTCCTCCCCT +
Preference number: 3 (lower is better)
Translates to: TLLTSQTCQVCA*LLGLCLYYSSP
Trigger: AGGGGAGGAATAATAAAGGCAAAGACCCAGAAGGCAAGCACAAACTTGGCATGTTTGAGAAGTTAGAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR GCA 72 bp CAATTCATAACTGCAAAGATATGGAACCAACCTAAGTaGCCACTGACCAATGAGTGGACAAAGAAAGTGTGG +
Preference number: 3 (lower is better)
Translates to: QFITAKIWNQPK*PLTNEWTKKVW
Trigger: CCACACTTTCTTTGTCCACTCATTGGTCAGTGGGCACTTAGGTTGGTTCCATATCTTTGCAGTTATGAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CCA 72 bp AATCTAATTTCTTCACTCCTCATCTTGAGGGGTAAGTaGGCAAACATCAAGAACACTGGCTTATCAGCAACC +
Preference number: 3 (lower is better)
Translates to: NLISSLLILRGK*ANIKNTGLSAT
Trigger: GGTTGCTGATAAGCCAGTGTTCTTGATGTTTGCCCACTTACCCCTCAAGATGAGGAGTGAAGAAATTAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR GCA 72 bp ATAAATTGGGCATGGATGTTAATGTATACTCATATGTaGCCACAACAGTTGGAGCCTTGGGAACAAGGAAGT +
Preference number: 3 (lower is better)
Translates to: INWAWMLMYTHM*PQQLEPWEQGS
Trigger: ACTTCCTTGTTCCCAAGGCTCCAACTGTTGTGGGCACATATGAGTATACATTAACATCCATGCCCAATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CAA 90 bp AGAGGAATTATACAATATCTGTTCTTTTGTGGCTGGCTTATTTCACTCAGCATAATGCCAAGTTTGTGCTaGCCTTCTGGGTCTTTGCCT +
Preference number: 3 (lower is better)
Translates to: RGIIQYLFFCGWLISLSIMPSLC*PSGSLP
Trigger: AGGCAAAGACCCAGAAGGCAAGCACAAACTTGGCAT...TATGCTGAGTGAAATAAGCCAGCCACAAAAGAACAGATATTGTATAATTCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CAA 90 bp CCACTGACCAATGAGTGGACAAAGAAAGTGTGGTATATATACACACCACGGAATGTCAGCATTTTTGGCTaGATAAAACCACAACTACCA +
Preference number: 3 (lower is better)
Translates to: PLTNEWTKKVWYIYTPRNVSIFG*IKPQLP
Trigger: TGGTAGTTGTGGTTTTATCAAGCCAAAAATGCTGAC...ATTCCGTGGTGTGTATATATACCACACTTTCTTTGTCCACTCATTGGTCAGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CAA 90 bp AGAGGAATTATACAATATCTGTTCTTTTGTGGCTGGCTTATTTCACTCAGCATACATGTAAGAAGTACCTaGCTTCCCCTTCGCCTTCTG +
Preference number: 3 (lower is better)
Translates to: RGIIQYLFFCGWLISLSIHVRST*LPLRLL
Trigger: CAGAAGGCGAAGGGGAAGCAAGGTACTTCTTACATG...TATGCTGAGTGAAATAAGCCAGCCACAAAAGAACAGATATTGTATAATTCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CAA 90 bp AGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATGGATGTTAATGTATTTGCCTTCTGGGTCTTaGCCTTTATTATTCCTCCCC +
Preference number: 3 (lower is better)
Translates to: STHVGKTVIINWAWMLMYLPSGS*PLLFLP
Trigger: GGGGAGGAATAATAAAGGCAAAGACCCAGAAGGCAA...ATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CAA 90 bp AGAGGAATTATACAATATCTGTTCTTTTGTGGCTGGCTTATTTCACTCAGCATAAGCAACACTGTCATCTaGAGAGCCACATCATTCCAG +
Preference number: 3 (lower is better)
Translates to: RGIIQYLFFCGWLISLSISNTVI*RATSFQ
Trigger: CTGGAATGATGTGGCTCTCAAGATGACAGTGTTGCT...TATGCTGAGTGAAATAAGCCAGCCACAAAAGAACAGATATTGTATAATTCCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR TCA 72 bp GACAGGTACACTAAAACCTCAGACTTCACCAATGTATaGTTCATCCATGTAAACAAAAACCCACTGTACCCT +
Preference number: 3 (lower is better)
Translates to: DRYTKTSDFTNV*FIHVNKNPLYP
Trigger: AGGGTACAGTGGGTTTTTGTTTACATGGATGAATCATACATTGGTGAAGTCTGAGGTTTTAGTGTACCTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR GCA 72 bp TCTGTGACATCAAGGACCAAATCTGGTTCATGTACATaGCAAGCATTTAGGACACTATGTCCTGTGTATTTA +
Preference number: 3 (lower is better)
Translates to: SVTSRTKSGSCT*QAFRTLCPVYL
Trigger: TAAATACACAGGACATAGTGTCCTAAATGCTTGGCATGTACATGAACCAGATTTGGTCCTTGATGTCACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CAA 90 bp AGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATGGATGTTAATGTATAGTCCACACTCACATTaGAGAGATCTGAGACACAGT +
Preference number: 3 (lower is better)
Translates to: STHVGKTVIINWAWMLMYSPHSH*RDLRHS
Trigger: ACTGTGTCTCAGATCTCTCAAATGTGAGTGTGGACT...ATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR TCA 72 bp GGCAAATCTTCGGAGAAAGAGAGCATTTTGTCTATTTaGAAATTCAGGCTCAGGCCTTCAAATGAAATGATG +
Preference number: 3 (lower is better)
Translates to: GKSSEKESILSI*KFRLRPSNEMM
Trigger: CATCATTTCATTTGAAGGCCTGAGCCTGAATTTTCAAATAGACAAAATGCTCTCTTTCTCCGAAGATTTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CCA 72 bp ACACATGTGGGGAAAACAGTGATTATAAATTGGGCATaGATGTTAATGTATACTCATATGTGCCCACAACAG +
Preference number: 3 (lower is better)
Translates to: THVGKTVIINWA*MLMYTHMCPQQ
Trigger: CTGTTGTGGGCACATATGAGTATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CAA 90 bp AGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATGGATGTTAATGTATAGAGCACCAAGAGGATaGTCTCAATCCTTAAGAGAA +
Preference number: 3 (lower is better)
Translates to: STHVGKTVIINWAWMLMYRAPRG*SQSLRE
Trigger: TTCTCTTAAGGATTGAGACAATCCTCTTGGTGCTCT...ATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CAA 90 bp AGAGGAATTATACAATATCTGTTCTTTTGTGGCTGGCTTATTTCACTCAGCATAAGACCCTTGTACCTTTaGGCTGAAGGTAAGAATTCA +
Preference number: 3 (lower is better)
Translates to: RGIIQYLFFCGWLISLSIRPLYL*AEGKNS
Trigger: TGAATTCTTACCTTCAGCCAAAAGGTACAAGGGTCT...TATGCTGAGTGAAATAAGCCAGCCACAAAAGAACAGATATTGTATAATTCCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR-3UTR CAA 90 bp AGAGGAATTATACAATATCTGTTCTTTTGTGGCTGGCTTATTTCACTCAGCATATCCCAGACAAGTGATTaGTCTCATTGGGAGAAATCT +
Preference number: 3 (lower is better)
Translates to: RGIIQYLFFCGWLISLSISQTSD*SHWEKS
Trigger: AGATTTCTCCCAATGAGACAAATCACTTGTCTGGGA...TATGCTGAGTGAAATAAGCCAGCCACAAAAGAACAGATATTGTATAATTCCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR TCA 72 bp GATTTAAATGTTGGCCTCTGCTACTTCCTTGTAGTGTaGGTTTGTAAAAATTGCTTTGTCTTTCCTGAGCTT +
Preference number: 3 (lower is better)
Translates to: DLNVGLCYFLVV*VCKNCFVFPEL
Trigger: AAGCTCAGGAAAGACAAAGCAATTTTTACAAACTCACACTACAAGGAAGTAGCAGAGGCCAACATTTAAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR GCA 72 bp GTAGGCCTTTCTGATAGGTCACTTGAGAATGACTTTTaGATTATTCATGCATTTTCCACAATAGACACTTCA +
Preference number: 3 (lower is better)
Translates to: VGLSDRSLENDF*IIHAFSTIDTS
Trigger: TGAAGTGTCTATTGTGGAAAATGCATGAATAATGCAAAAGTCATTCTCAAGTGACCTATCAGAAAGGCCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR TCA 72 bp CCTCTTCTTCCCCACCATCTCATCAATTTATACGCATaGTCTTATTTTAATGCTTACAATAGCCCTTTAAAG +
Preference number: 3 (lower is better)
Translates to: PLLPHHLINLYA*SYFNAYNSPLK
Trigger: CTTTAAAGGGCTATTGTAAGCATTAAAATAAGATCATGCGTATAAATTGATGAGATGGTGGGGAAGAAGAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR TCA 72 bp ATCAGCAACCTTCAGAGAAAGTTACTGAGAAGAAGGTaGTTGCTAAGTATTTACAGATTAAAGACTCAACCT +
Preference number: 3 (lower is better)
Translates to: ISNLQRKLLRRR*LLSIYRLKTQP
Trigger: AGGTTGAGTCTTTAATCTGTAAATACTTAGCAATCACCTTCTTCTCAGTAACTTTCTCTGAAGGTTGCTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR GCA 72 bp ATATCCAAATTCCTACTTTACCTCTCCAGAGATCACTaGCAACAAAGTTATTACCTCTCTAAGATCCTAATA +
Preference number: 3 (lower is better)
Translates to: ISKFLLYLSRDH*QQSYYLSKILI
Trigger: TATTAGGATCTTAGAGAGGTAATAACTTTGTTGGCAGTGATCTCTGGAGAGGTAAAGTAGGAATTTGGATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp ACAGTGAGCCGAGATCAGGCCATTGCCCATTTCCTGGGCAACAAGAGTGAAACTTGTTGTAGAGGCGGGTaGGCATGCCGACGCCCCGGT +
Preference number: 4 (lower is better)
Translates to: TVSRDQAIAHFLGNKSETCCRGG*ACRRPG
Trigger: ACCGGGGCGTCGGCATGCTCACCCGCCTCTACAACA...AGTTTCACTCTTGTTGCCCAGGAAATGGGCAATGGCCTGATCTCGGCTCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp CCTGGGTGTCCCCCTAGGGCTACAGCTGCTCTCAAGGTCACTTCCTCTCACACACCCTCATGTAAGAGGTaGCCAAGATGCACCTGCACC +
Preference number: 4 (lower is better)
Translates to: PGCPPRATAALKVTSSHTPSCKR*PRCTCT
Trigger: GGTGCAGGTGCATCTTGGTCACCTCTTACATGAGGG...TGTGTGAGAGGAAGTGACCTTGAGAGCAGCTGTAGCCCTAGGGGGACACCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp CCTGGGTGTCCCCCTAGGGCTACAGCTGCTCTCAAGGTCACTTCCTCTCACACAGCTGCGGCTGTGCTCTaGACTTCTGTGTACGTCGAA +
Preference number: 4 (lower is better)
Translates to: PGCPPRATAALKVTSSHTAAAVL*TSVYVE
Trigger: TTCGACGTACACAGAAGTGCAGAGCACAGCCGCAGC...TGTGTGAGAGGAAGTGACCTTGAGAGCAGCTGTAGCCCTAGGGGGACACCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp CCTGGGTGTCCCCCTAGGGCTACAGCTGCTCTCAAGGTCACTTCCTCTCACACATCATTTCCCTCTCCTTaGCAGCCCCTGCCAACCAAC +
Preference number: 4 (lower is better)
Translates to: PGCPPRATAALKVTSSHTSFPSP*QPLPTN
Trigger: GTTGGTTGGCAGGGGCTGGCAAGGAGAGGGAAATGA...TGTGTGAGAGGAAGTGACCTTGAGAGCAGCTGTAGCCCTAGGGGGACACCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp TCAGTTTGGCTCTCTCTGGTGAATCCCACCCCCACACCATGTGATGCTCTGTGTACAGGGAGCCCAACCTaGGCTGAGCTTCTTGGGTAC +
Preference number: 4 (lower is better)
Translates to: SVWLSLVNPTPTPCDALCTGSPT*AELLGY
Trigger: GTACCCAAGAAGCTCAGCTCAGGTTGGGCTCCCTGT...ACACAGAGCATCACATGGTGTGGGGGTGGGATTCACCAGAGAGAGCCAAACTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CAA 72 bp GGAGGGTCTGCTTTCTGGTTCATGAACAGTGGCTTCTaGCTTTGTCCTCACGTGGTGGTTGGGGCAAGTCGG +
Preference number: 4 (lower is better)
Translates to: GGSAFWFMNSGF*LCPHVVVGASR
Trigger: CCGACTTGCCCCAACCACCACGTGAGGACAAAGCAAGAAGCCACTGTTCATGAACCAGAAAGCAGACCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp ACAGTGAGCCGAGATCAGGCCATTGCCCATTTCCTGGGCAACAAGAGTGAAACTGATGGGAGAATTGCTTaGACCCGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: TVSRDQAIAHFLGNKSETDGRIA*TREAEV
Trigger: AACCTCCGCCTCCCGGGTTCAAGCAATTCTCCCATC...AGTTTCACTCTTGTTGCCCAGGAAATGGGCAATGGCCTGATCTCGGCTCACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp ACAGTGAGCCGAGATCAGGCCATTGCCCATTTCCTGGGCAACAAGAGTGAAACTCCAGTGCAGCAGTGTTaGGAGGTGGGACTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: TVSRDQAIAHFLGNKSETPVQQC*EVGLLG
Trigger: TCCCAGAAGTCCCACCTCTCAACACTGCTGCACTGG...AGTTTCACTCTTGTTGCCCAGGAAATGGGCAATGGCCTGATCTCGGCTCACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATGGCGTCTCCGGCGGCTaGGAACGAGGCCGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDGVSGG*ERGRFP
Trigger: CGGGAAGCGGCCTCGTTCTCAGCCGCCGGAGACGCC...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360982.2
CDS-3UTR GCA 90 bp TCAGTTTGGCTCTCTCTGGTGAATCCCACCCCCACACCATGTGATGCTCTGTGTCACTCTGATGCTCTCTaGCCCCACAGCCTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: SVWLSLVNPTPTPCDALCHSDAL*PHSLWK
Trigger: TTTCCACAGGCTGTGGGGGCAGAGAGCATCAGAGTG...ACACAGAGCATCACATGGTGTGGGGGTGGGATTCACCAGAGAGAGCCAAACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GGACAGTCAAGGACAGCGATGTGTAGGGAAAGTTTGGTTCATGCAAAAATGAATCTGAGCGCGACATGGTaGTGCTGGTGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: GQSRTAMCRESLVHAKMNLSATW*CWCRRR
Trigger: GCGGCGGCGGCACCAGCACCACCATGTCGCGCTCAG...ATTCATTTTTGCATGAACCAAACTTTCCCTACACATCGCTGTCCTTGACTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATCTCTGGCCCTGGCCCTaGCCCGGACCGCCCACTACG +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDLWPWP*PGPPTT
Trigger: CGTAGTGGGCGGTCCGGGCCAGGGCCAGGGCCAGAG...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360982.2
CDS-3UTR TCA 90 bp ACCACTGTGCCTGGCCACCAGTACTTCTTACGTAATACTTGCTGTAGAGAATCTACTGGGCTGCAGCACTaGGCGCGACATGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: TTVPGHQYFLRNTCCRESTGLQH*ARHGGA
Trigger: AGCACCACCATGTCGCGCTCAGTGCTGCAGCCCAGT...AGATTCTCTACAGCAAGTATTACGTAAGAAGTACTGGTGGCCAGGCACAGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp CCTGGGTGTCCCCCTAGGGCTACAGCTGCTCTCAAGGTCACTTCCTCTCACACAAACCCCAGATTTGTTTaGGGCTGTGGCATCATACTT +
Preference number: 4 (lower is better)
Translates to: PGCPPRATAALKVTSSHTNPRFV*GCGIIL
Trigger: AAGTATGATGCCACAGCCTCAAACAAATCTGGGGTT...TGTGTGAGAGGAAGTGACCTTGAGAGCAGCTGTAGCCCTAGGGGGACACCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp TCAGTTTGGCTCTCTCTGGTGAATCCCACCCCCACACCATGTGATGCTCTGTGTATTAAGGGAGTCCACTaGCCATGGAGTGGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: SVWLSLVNPTPTPCDALCIKGVH*PWSGSG
Trigger: GCCAGAACCACTCCATGGTCAGTGGACTCCCTTAAT...ACACAGAGCATCACATGGTGTGGGGGTGGGATTCACCAGAGAGAGCCAAACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp TCAGTTTGGCTCTCTCTGGTGAATCCCACCCCCACACCATGTGATGCTCTGTGTCCCTGTACGATCAGCTaGGAAAGAACTGCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: SVWLSLVNPTPTPCDALCPCTIS*ERTASA
Trigger: TGCACTGGCAGTTCTTTCGCAGCTGATCGTACAGGG...ACACAGAGCATCACATGGTGTGGGGGTGGGATTCACCAGAGAGAGCCAAACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATAGGAGAGCGCGCCCATaGCCCTCGCGCCCCAATCCC +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDRRARP*PSRPNP
Trigger: GGGATTGGGGCGCGAGGGCCATGGGCGCGCTCTCCT...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATCTGAGCGCGACATGGTaGTGCTGGTGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDLSATW*CWCRRR
Trigger: GCGGCGGCGGCACCAGCACCACCATGTCGCGCTCAG...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR TCA 90 bp CCTGGGTGTCCCCCTAGGGCTACAGCTGCTCTCAAGGTCACTTCCTCTCACACAAAGCAAGCAAGCACATaGTCAGAAGAGAAAAAGAGC +
Preference number: 4 (lower is better)
Translates to: PGCPPRATAALKVTSSHTKQAST*SEEKKS
Trigger: GCTCTTTTTCTCTTCTGATCATGTGCTTGCTTGCTT...TGTGTGAGAGGAAGTGACCTTGAGAGCAGCTGTAGCCCTAGGGGGACACCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp TCAGTTTGGCTCTCTCTGGTGAATCCCACCCCCACACCATGTGATGCTCTGTGTTCCAAGGGTGTTCTATaGGCCTTATTGGTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: SVWLSLVNPTPTPCDALCSKGVL*ALLVLP
Trigger: AGGGAGGACCAATAAGGCTCATAGAACACCCTTGGA...ACACAGAGCATCACATGGTGTGGGGGTGGGATTCACCAGAGAGAGCCAAACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATACCGCCCACTACGCCTaGTGCCGGGATGGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDTAHYA*CRDGSP
Trigger: GGGACTCCCATCCCGGCATCAGGCGTAGTGGGCGGT...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360982.2
CDS-3UTR GCA 90 bp TTAAACAGAAACCAGCCCTTTGGAAAGACCTGTTGCACCTCTGATTACAACCAACCTCGAACCACCCACTaGCGCCAACCCTCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: LNRNQPFGKTCCTSDYNQPRTTH*RQPSPW
Trigger: CCAAGGGGAGGGTTGGCGGCAGTGGGTGGTTCGAGG...TTGGTTGTAATCAGAGGTGCAACAGGTCTTTCCAAAGGGCTGGTTTCTGTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp CCTGGGTGTCCCCCTAGGGCTACAGCTGCTCTCAAGGTCACTTCCTCTCACACACACCCTCATAGGTCATaGATCCTCAAAACCTTTTCT +
Preference number: 4 (lower is better)
Translates to: PGCPPRATAALKVTSSHTHPHRS*ILKTFS
Trigger: AGAAAAGGTTTTGAGGATGCATGACCTATGAGGGTG...TGTGTGAGAGGAAGTGACCTTGAGAGCAGCTGTAGCCCTAGGGGGACACCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp ACAGTGAGCCGAGATCAGGCCATTGCCCATTTCCTGGGCAACAAGAGTGAAACTACTATCTTGGAGGACTaGAGGTGCCCTGGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: TVSRDQAIAHFLGNKSETTILED*RCPGSQ
Trigger: TTGGCTACCAGGGCACCTGCAGTCCTCCAAGATAGT...AGTTTCACTCTTGTTGCCCAGGAAATGGGCAATGGCCTGATCTCGGCTCACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp ACAGTTAAATGGTTAAATGACTACCTACTTCAATGTGCTTTCTGGCAGCCAGAAAGGAGAGCGCGCCCATaGCCCTCGCGCCCCAATCCC +
Preference number: 4 (lower is better)
Translates to: TVKWLNDYLLQCAFWQPERRARP*PSRPNP
Trigger: GGGATTGGGGCGCGAGGGCCATGGGCGCGCTCTCCT...TTCTGGCTGCCAGAAAGCACATTGAAGTAGGTAGTCATTTAACCATTTAACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATGCACTGAGCGCGACATaGTGGTGCTGGTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDALSAT*WCWCRR
Trigger: GCGGCGGCACCAGCACCACCATGTCGCGCTCAGTGC...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CCA 90 bp TCAGTTTGGCTCTCTCTGGTGAATCCCACCCCCACACCATGTGATGCTCTGTGTTTAGTCCATGTTTGGTaGAAAGGGGTCCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: SVWLSLVNPTPTPCDALCLVHVW*KGVLST
Trigger: GGTGCTGAGGACCCCTTTCCACCAAACATGGACTAA...ACACAGAGCATCACATGGTGTGGGGGTGGGATTCACCAGAGAGAGCCAAACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATTGTTGTAGAGGCGGGTaGGCATGCCGACGCCCCGGT +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDCCRGG*ACRRPG
Trigger: ACCGGGGCGTCGGCATGCTCACCCGCCTCTACAACA...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR TCA 90 bp ATACAAGGGGCTCAGATTCTGCATCTTCTCCCCCTGACATCCCAGACAAGTGATCCTAGCAATCCAGGTTaGTCAGAGAGGACAGTAGCC +
Preference number: 4 (lower is better)
Translates to: IQGAQILHLLPLTSQTSDPSNPG*SERTVA
Trigger: GGCTACTGTCCTCTCTGATCAACCTGGATTGCTAGG...ATCACTTGTCTGGGATGTCAGGGGGAGAAGATGCAGAATCTGAGCCCCTTGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp ACCACTGTGCCTGGCCACCAGTACTTCTTACGTAATACTTGCTGTAGAGAATCTGGTAAGGGCTGGGGATaGGGGGTGCACTTAAACCAG +
Preference number: 4 (lower is better)
Translates to: TTVPGHQYFLRNTCCRESGKGWG*GVHLNQ
Trigger: CTGGTTTAAGTGCACCCCTCATCCCCAGCCCTTACC...AGATTCTCTACAGCAAGTATTACGTAAGAAGTACTGGTGGCCAGGCACAGTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATGTCCCAAGCGGGGACTaGGTGGGGTCGCGTTGTGTG +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDVPSGD*VGSRCV
Trigger: CACACAACGCGACCCCACTCAGTCCCCGCTTGGGAC...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000360982.2
CDS-3UTR GCA 90 bp CCTGGGTGTCCCCCTAGGGCTACAGCTGCTCTCAAGGTCACTTCCTCTCACACACAAACAGAAAGATTCTaGACGAGTTCATTGAGGACA +
Preference number: 4 (lower is better)
Translates to: PGCPPRATAALKVTSSHTQTERF*TSSLRT
Trigger: TGTCCTCAATGAACTCGTGCAGAATCTTTCTGTTTG...TGTGTGAGAGGAAGTGACCTTGAGAGCAGCTGTAGCCCTAGGGGGACACCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp CCACTGACCAATGAGTGGACAAAGAAAGTGTGGTATATATACACACCACGGAATCCTCCAAGTTACCTTTaGCACGCCTCCTCCCCCGCC +
Preference number: 4 (lower is better)
Translates to: PLTNEWTKKVWYIYTPRNPPSYL*HASSPA
Trigger: GGCGGGGGAGGAGGCGTGGCAAAGGTAACTTGGAGG...ATTCCGTGGTGTGTATATATACCACACTTTCTTTGTCCACTCATTGGTCAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp ACAGTGAGCCGAGATCAGGCCATTGCCCATTTCCTGGGCAACAAGAGTGAAACTAGCCATCACAAGTTCTaGCATCTGGGCCTTGCTTCA +
Preference number: 4 (lower is better)
Translates to: TVSRDQAIAHFLGNKSETSHHKF*HLGLAS
Trigger: TGAAGCAAGGCCCAGATGGCAGAACTTGTGATGGCT...AGTTTCACTCTTGTTGCCCAGGAAATGGGCAATGGCCTGATCTCGGCTCACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp TCAGTTTGGCTCTCTCTGGTGAATCCCACCCCCACACCATGTGATGCTCTGTGTCTTCAATGTGCTTTCTaGCAGCCAGAATCTGCATGC +
Preference number: 4 (lower is better)
Translates to: SVWLSLVNPTPTPCDALCLQCAF*QPESAC
Trigger: GCATGCAGATTCTGGCTGCCAGAAAGCACATTGAAG...ACACAGAGCATCACATGGTGTGGGGGTGGGATTCACCAGAGAGAGCCAAACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATCGCCTGATGCCGGGATaGGAGTCCCAAGCGGGGACT +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDRLMPG*ESQAGT
Trigger: AGTCCCCGCTTGGGACTCCCATCCCGGCATCAGGCG...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360982.2
3UTR CAA 72 bp GTGAAATGGGGAAGGCAAGTGGAGGGAGCTGACGTTTaGGACTCTGGACAGATACAATACATACCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: VKWGRQVEGADV*DSGQIQYIPAA
Trigger: GGCAGCAGGTATGTATTGTATCTGTCCAGAGTCCAAAACGTCAGCTCCCTCCACTTGCCTTCCCCATTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATACTGGGCTGCAGCACTaGGCGCGACATGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDTGLQH*ARHGGA
Trigger: AGCACCACCATGTCGCGCTCAGTGCTGCAGCCCAGT...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR TCA 90 bp TCAGTTTGGCTCTCTCTGGTGAATCCCACCCCCACACCATGTGATGCTCTGTGTCTGCCACAAACACCATaGGAAGGCAGGCAATTTTAT +
Preference number: 4 (lower is better)
Translates to: SVWLSLVNPTPTPCDALCLPQTP*EGRQFY
Trigger: ATAAAATTGCCTGCCTTCTCATGGTGTTTGTGGCAG...ACACAGAGCATCACATGGTGTGGGGGTGGGATTCACCAGAGAGAGCCAAACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GTTTGTGGAGGGTCTGCTTTCTGGTTCATGAACAGTGGCTTCTTGCTTTGTCCTCTCCTAGAGGGAACTTaGGCACTCCTCATGACAGAG +
Preference number: 4 (lower is better)
Translates to: VCGGSAFWFMNSGFLLCPLLEGT*ALLMTE
Trigger: CTCTGTCATGAGGAGTGCTCAAGTTCCCTCTAGGAG...AGGACAAAGCAAGAAGCCACTGTTCATGAACCAGAAAGCAGACCCTCCACAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp CCTGGGTGTCCCCCTAGGGCTACAGCTGCTCTCAAGGTCACTTCCTCTCACACATACTTAGGCCCAAAATaGCAGGCTGAATACTTTTAT +
Preference number: 4 (lower is better)
Translates to: PGCPPRATAALKVTSSHTYLGPK*QAEYFY
Trigger: ATAAAAGTATTCAGCCTGTCATTTTGGGCCTAAGTA...TGTGTGAGAGGAAGTGACCTTGAGAGCAGCTGTAGCCCTAGGGGGACACCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GAGGCTGTGGCATCATACTTCAAGTCATATCCACGTCCAAAATCCTACCAGGAACACCCCCACACCATGTaGTGCTCTGTGTTACCTCAG +
Preference number: 4 (lower is better)
Translates to: EAVASYFKSYPRPKSYQEHPHTM*CSVLPQ
Trigger: CTGAGGTAACACAGAGCATCACATGGTGTGGGGGTG...TTCCTGGTAGGATTTTGGACGTGGATATGACTTGAAGTATGATGCCACAGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp ATACAAGGGGCTCAGATTCTGCATCTTCTCCCCCTGACATCCCAGACAAGTGATAAGGAGTTCAACCGCTaGGCCCTAGAGTTAAGGAGA +
Preference number: 4 (lower is better)
Translates to: IQGAQILHLLPLTSQTSDKEFNR*ALELRR
Trigger: TCTCCTTAACTCTAGGGCTCAGCGGTTGAACTCCTT...ATCACTTGTCTGGGATGTCAGGGGGAGAAGATGCAGAATCTGAGCCCCTTGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp TCAGTTTGGCTCTCTCTGGTGAATCCCACCCCCACACCATGTGATGCTCTGTGTGTGTCATCACTGAGCTaGTGCTATTACAGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: SVWLSLVNPTPTPCDALCVSSLS*CYYRCR
Trigger: TCTACACCTGTAATAGCAGCAGCTCAGTGATGACAC...ACACAGAGCATCACATGGTGTGGGGGTGGGATTCACCAGAGAGAGCCAAACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATCCAGCTTCTGCTGACTaGGCTGCAGCACTGAGCGCG +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDPASAD*AAALSA
Trigger: CGCGCTCAGTGCTGCAGCCCAGTCAGCAGAAGCTGG...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CCA 90 bp ATACAAGGGGCTCAGATTCTGCATCTTCTCCCCCTGACATCCCAGACAAGTGATCGCCTCTCAAAGTGTTaGGATTACAGGCGTGAACCA +
Preference number: 4 (lower is better)
Translates to: IQGAQILHLLPLTSQTSDRLSKC*DYRREP
Trigger: TGGTTCACGCCTGTAATCCCAACACTTTGAGAGGCG...ATCACTTGTCTGGGATGTCAGGGGGAGAAGATGCAGAATCTGAGCCCCTTGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GAGGCTGTGGCATCATACTTCAAGTCATATCCACGTCCAAAATCCTACCAGGAACAAGTAAACCTGCTGTaGGACAACCCTTGCCACCCC +
Preference number: 4 (lower is better)
Translates to: EAVASYFKSYPRPKSYQEQVNLL*DNPCHP
Trigger: GGGGTGGCAAGGGTTGTCCCACAGCAGGTTTACTTG...TTCCTGGTAGGATTTTGGACGTGGATATGACTTGAAGTATGATGCCACAGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CAA 72 bp CTGGGAAGCCAATCAGTGTGCTGGCATATTTGGTGTTaGTGGAGGGTCTGCTTTCTGGTTCATGAACAGTGG +
Preference number: 4 (lower is better)
Translates to: LGSQSVCWHIWC*WRVCFLVHEQW
Trigger: CCACTGTTCATGAACCAGAAAGCAGACCCTCCACAAACACCAAATATGCCAGCACACTGATTGGCTTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GTTTGTGGAGGGTCTGCTTTCTGGTTCATGAACAGTGGCTTCTTGCTTTGTCCTGACGAAGTAGCCAGATaGTTTCATCACGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: VCGGSAFWFMNSGFLLCPDEVAR*FHHGQR
Trigger: CCTTTGCCCGTGATGAAATCATCTGGCTACTTCGTC...AGGACAAAGCAAGAAGCCACTGTTCATGAACCAGAAAGCAGACCCTCCACAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp TTAAACAGAAACCAGCCCTTTGGAAAGACCTGTTGCACCTCTGATTACAACCAAACTTTCTGGGTGCTGTaGCCTCCAGCAGCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: LNRNQPFGKTCCTSDYNQTFWVL*PPAAEA
Trigger: TGCCTCTGCTGCTGGAGGTCACAGCACCCAGAAAGT...TTGGTTGTAATCAGAGGTGCAACAGGTCTTTCCAAAGGGCTGGTTTCTGTTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GTTTGTGGAGGGTCTGCTTTCTGGTTCATGAACAGTGGCTTCTTGCTTTGTCCTGGCCAAATAGCCTCCTaGTCCAAGGCCACAAATTCT +
Preference number: 4 (lower is better)
Translates to: VCGGSAFWFMNSGFLLCPGQIAS*SKATNS
Trigger: AGAATTTGTGGCCTTGGATCAGGAGGCTATTTGGCC...AGGACAAAGCAAGAAGCCACTGTTCATGAACCAGAAAGCAGACCCTCCACAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp ACAGTGAGCCGAGATCAGGCCATTGCCCATTTCCTGGGCAACAAGAGTGAAACTTTCGTCTTCCCCAACTaGAACTCTGTTCCCTTCATA +
Preference number: 4 (lower is better)
Translates to: TVSRDQAIAHFLGNKSETFVFPN*NSVPFI
Trigger: TATGAAGGGAACAGAGTTTCAGTTGGGGAAGACGAA...AGTTTCACTCTTGTTGCCCAGGAAATGGGCAATGGCCTGATCTCGGCTCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp GTTTGTGGAGGGTCTGCTTTCTGGTTCATGAACAGTGGCTTCTTGCTTTGTCCTACATATTGCCCAGGCTaGTCTCGAACTTCTAGGCTC +
Preference number: 4 (lower is better)
Translates to: VCGGSAFWFMNSGFLLCPTYCPG*SRTSRL
Trigger: GAGCCTAGAAGTTCGAGAGCAGCCTGGGCAATATGT...AGGACAAAGCAAGAAGCCACTGTTCATGAACCAGAAAGCAGACCCTCCACAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp ATACAAGGGGCTCAGATTCTGCATCTTCTCCCCCTGACATCCCAGACAAGTGATCAACCCTTGGACCTCTaGAAGGATGTGACAGGAATA +
Preference number: 4 (lower is better)
Translates to: IQGAQILHLLPLTSQTSDQPLDL*KDVTGI
Trigger: TATTCCTGTCACATCCTTGCAGAGGTCCAAGGGTTG...ATCACTTGTCTGGGATGTCAGGGGGAGAAGATGCAGAATCTGAGCCCCTTGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp GTTTGTGGAGGGTCTGCTTTCTGGTTCATGAACAGTGGCTTCTTGCTTTGTCCTCATTTAAGCTGGGAATaGAGCCATACCGGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: VCGGSAFWFMNSGFLLCPHLSWE*SHTGCQ
Trigger: CTGACACCCGGTATGGCTGCATTCCCAGCTTAAATG...AGGACAAAGCAAGAAGCCACTGTTCATGAACCAGAAAGCAGACCCTCCACAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp CCTGGGTGTCCCCCTAGGGCTACAGCTGCTCTCAAGGTCACTTCCTCTCACACAGCTTTTGGAGAAACTTaGCCTTATATACTCTCTTAT +
Preference number: 4 (lower is better)
Translates to: PGCPPRATAALKVTSSHTAFGET*PYILSY
Trigger: ATAAGAGAGTATATAAGGGCAAGTTTCTCCAAAAGC...TGTGTGAGAGGAAGTGACCTTGAGAGCAGCTGTAGCCCTAGGGGGACACCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATGCTTTTTCCTCCCACTaGTTGACAGGCGCTCGCCGC +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDAFSSH*LTGARR
Trigger: GCGGCGAGCGCCTGTCAAGCAGTGGGAGGAAAAAGC...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000360982.2
CDS-3UTR CCA 90 bp ACAGTGAGCCGAGATCAGGCCATTGCCCATTTCCTGGGCAACAAGAGTGAAACTCAAAGGCAGAGGTCATaGCAAATCTTCGGAGAAAGA +
Preference number: 4 (lower is better)
Translates to: TVSRDQAIAHFLGNKSETQRQRS*QIFGER
Trigger: TCTTTCTCCGAAGATTTGCCATGACCTCTGCCTTTG...AGTTTCACTCTTGTTGCCCAGGAAATGGGCAATGGCCTGATCTCGGCTCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp ACAGTTAAATGGTTAAATGACTACCTACTTCAATGTGCTTTCTGGCAGCCAGAAGGCAAGTCGGCTGTCTaGGGCCCCTTTTACGAGGGC +
Preference number: 4 (lower is better)
Translates to: TVKWLNDYLLQCAFWQPEGKSAV*GPFYEG
Trigger: GCCCTCGTAAAAGGGGCCCCAGACAGCCGACTTGCC...TTCTGGCTGCCAGAAAGCACATTGAAGTAGGTAGTCATTTAACCATTTAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp ACCACTGTGCCTGGCCACCAGTACTTCTTACGTAATACTTGCTGTAGAGAATCTTTGGAGACTCAGAAGTaGGAGGATGGGAACGGGTCT +
Preference number: 4 (lower is better)
Translates to: TTVPGHQYFLRNTCCRESLETQK*EDGNGS
Trigger: AGACCCGTTCCCATCCTCCCACTTCTGAGTCTCCAA...AGATTCTCTACAGCAAGTATTACGTAAGAAGTACTGGTGGCCAGGCACAGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp TCAGTTTGGCTCTCTCTGGTGAATCCCACCCCCACACCATGTGATGCTCTGTGTGGAGAAGTCACATATTaGTATCAGAGTGTGCAGTCA +
Preference number: 4 (lower is better)
Translates to: SVWLSLVNPTPTPCDALCGEVTY*YQSVQS
Trigger: TGACTGCACACTCTGATACCAATATGTGACTTCTCC...ACACAGAGCATCACATGGTGTGGGGGTGGGATTCACCAGAGAGAGCCAAACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp TCAGTTTGGCTCTCTCTGGTGAATCCCACCCCCACACCATGTGATGCTCTGTGTCCATTTACAAGCTATTaGACTAACTCCCCTTGGATC +
Preference number: 4 (lower is better)
Translates to: SVWLSLVNPTPTPCDALCPFTSY*TNSPWI
Trigger: GATCCAAGGGGAGTTAGTCCAATAGCTTGTAAATGG...ACACAGAGCATCACATGGTGTGGGGGTGGGATTCACCAGAGAGAGCCAAACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp ACAGTGAGCCGAGATCAGGCCATTGCCCATTTCCTGGGCAACAAGAGTGAAACTGGGCTATCAAGGGAGTaGGTTAGTTACCACAAAAGT +
Preference number: 4 (lower is better)
Translates to: TVSRDQAIAHFLGNKSETGLSRE*VSYHKS
Trigger: ACTTTTGTGGTAACTAACCCACTCCCTTGATAGCCC...AGTTTCACTCTTGTTGCCCAGGAAATGGGCAATGGCCTGATCTCGGCTCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATCAAGCGGGGACTGAGTaGGGTCGCGTTGTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDQAGTE*GRVVCS
Trigger: AGAGCACACAACGCGACCCCACTCAGTCCCCGCTTG...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360982.2
3UTR CAA 72 bp GGGTCTTTGCCTTTATTATTCCTCCCCTCAGCCCACTaGTGGTTCCTTCTAATCCTTCACGTACCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: GSLPLLFLPSAH*WFLLILHVPAQ
Trigger: TTGAGCTGGTACGTGAAGGATTAGAAGGAACCACAAGTGGGCTGAGGGGAGGAATAATAAAGGCAAAGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CAA 72 bp AGAATAGAACAGGGAGCCCAACCTGAGCTGAGCTTCTaGGGTACTCCTAAGAAAAACACTTCCCTGGAATCC +
Preference number: 4 (lower is better)
Translates to: RIEQGAQPELSF*GTPKKNTSLES
Trigger: GGATTCCAGGGAAGTGTTTTTCTTAGGAGTACCCAAGAAGCTCAGCTCAGGTTGGGCTCCCTGTTCTATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GTTTGTGGAGGGTCTGCTTTCTGGTTCATGAACAGTGGCTTCTTGCTTTGTCCTTCTCCACTGGTCAGCTaGAAGATTCCTTCGAGGATA +
Preference number: 4 (lower is better)
Translates to: VCGGSAFWFMNSGFLLCPSPLVS*KIPSRI
Trigger: TATCCTCGAAGGAATCTTTCAGCTGACCAGTGGAGA...AGGACAAAGCAAGAAGCCACTGTTCATGAACCAGAAAGCAGACCCTCCACAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp TCAGTTTGGCTCTCTCTGGTGAATCCCACCCCCACACCATGTGATGCTCTGTGTATTTCCTGTGTGGCTTaGTTATACATAGTCATCCCA +
Preference number: 4 (lower is better)
Translates to: SVWLSLVNPTPTPCDALCISCVA*LYIVIP
Trigger: TGGGATGACTATGTATAATCAAGCCACACAGGAAAT...ACACAGAGCATCACATGGTGTGGGGGTGGGATTCACCAGAGAGAGCCAAACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GGACAGTCAAGGACAGCGATGTGTAGGGAAAGTTTGGTTCATGCAAAAATGAATGGCCTCCCAAAGTGCTaGAATAGGCGTGTGCCACTA +
Preference number: 4 (lower is better)
Translates to: GQSRTAMCRESLVHAKMNGLPKC*NRRVPL
Trigger: TAGTGGCACACGCCTATTTCAGCACTTTGGGAGGCC...ATTCATTTTTGCATGAACCAAACTTTCCCTACACATCGCTGTCCTTGACTGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GTTTGTGGAGGGTCTGCTTTCTGGTTCATGAACAGTGGCTTCTTGCTTTGTCCTGCAACACTGTCATCTTaGGAGCCACATCATTCCAGT +
Preference number: 4 (lower is better)
Translates to: VCGGSAFWFMNSGFLLCPATLSS*EPHHSS
Trigger: ACTGGAATGATGTGGCTCTCAAGATGACAGTGTTGC...AGGACAAAGCAAGAAGCCACTGTTCATGAACCAGAAAGCAGACCCTCCACAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp ATACAAGGGGCTCAGATTCTGCATCTTCTCCCCCTGACATCCCAGACAAGTGATTTTTTGCAGCAACTATaGTGGAGCCAGAGGCCATTA +
Preference number: 4 (lower is better)
Translates to: IQGAQILHLLPLTSQTSDFLQQL*WSQRPL
Trigger: TAATGGCCTCTGGCTCCATCATAGTTGCTGCAAAAA...ATCACTTGTCTGGGATGTCAGGGGGAGAAGATGCAGAATCTGAGCCCCTTGTAT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp ACCACTGTGCCTGGCCACCAGTACTTCTTACGTAATACTTGCTGTAGAGAATCTTGCATCTTCTCCCCCTaGCATCCCAGACAAGTGATT +
Preference number: 4 (lower is better)
Translates to: TTVPGHQYFLRNTCCRESCIFSP*HPRQVI
Trigger: AATCACTTGTCTGGGATGTCAGGGGGAGAAGATGCA...AGATTCTCTACAGCAAGTATTACGTAAGAAGTACTGGTGGCCAGGCACAGTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp TCAGTTTGGCTCTCTCTGGTGAATCCCACCCCCACACCATGTGATGCTCTGTGTGATGAGGAGTTACACTaGCAGGATAAAATTTCAAGG +
Preference number: 4 (lower is better)
Translates to: SVWLSLVNPTPTPCDALCDEELH*QDKISR
Trigger: CCTTGAAATTTTATCCTGTCAGTGTAACTCCTCATC...ACACAGAGCATCACATGGTGTGGGGGTGGGATTCACCAGAGAGAGCCAAACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GGACAGTCAAGGACAGCGATGTGTAGGGAAAGTTTGGTTCATGCAAAAATGAATGCAAGTGGAGGGAGCTaGCGTTTTGGACTCTGGACA +
Preference number: 4 (lower is better)
Translates to: GQSRTAMCRESLVHAKMNASGGS*RFGLWT
Trigger: TGTCCAGAGTCCAAAACGTCAGCTCCCTCCACTTGC...ATTCATTTTTGCATGAACCAAACTTTCCCTACACATCGCTGTCCTTGACTGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GGACAGTCAAGGACAGCGATGTGTAGGGAAAGTTTGGTTCATGCAAAAATGAATTTTGGCTCTCTCTGGTaGATCCCACCCCCACACCAT +
Preference number: 4 (lower is better)
Translates to: GQSRTAMCRESLVHAKMNFGSLW*IPPPHH
Trigger: ATGGTGTGGGGGTGGGATTCACCAGAGAGAGCCAAA...ATTCATTTTTGCATGAACCAAACTTTCCCTACACATCGCTGTCCTTGACTGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GGACAGTCAAGGACAGCGATGTGTAGGGAAAGTTTGGTTCATGCAAAAATGAATGAGCCCAACCTGAGCTaGGCTTCTTGGGTACTCCTA +
Preference number: 4 (lower is better)
Translates to: GQSRTAMCRESLVHAKMNEPNLS*ASWVLL
Trigger: TAGGAGTACCCAAGAAGCTCAGCTCAGGTTGGGCTC...ATTCATTTTTGCATGAACCAAACTTTCCCTACACATCGCTGTCCTTGACTGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp ATACAAGGGGCTCAGATTCTGCATCTTCTCCCCCTGACATCCCAGACAAGTGATTGTTTGTGGAGGGTCTaGTTTCTGGTTCATGAACAG +
Preference number: 4 (lower is better)
Translates to: IQGAQILHLLPLTSQTSDCLWRV*FLVHEQ
Trigger: CTGTTCATGAACCAGAAAGCAGACCCTCCACAAACA...ATCACTTGTCTGGGATGTCAGGGGGAGAAGATGCAGAATCTGAGCCCCTTGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp CCACTGACCAATGAGTGGACAAAGAAAGTGTGGTATATATACACACCACGGAATCTGCCATCTGGGCCTTaGTTCAGACTGCAAAGACCC +
Preference number: 4 (lower is better)
Translates to: PLTNEWTKKVWYIYTPRNLPSGP*FRLQRP
Trigger: GGGTCTTTGCAGTCTGAAGCAAGGCCCAGATGGCAG...ATTCCGTGGTGTGTATATATACCACACTTTCTTTGTCCACTCATTGGTCAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp GAGGCTGTGGCATCATACTTCAAGTCATATCCACGTCCAAAATCCTACCAGGAACCCCCACAGAAAATATaGTGTGAGGTGGGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: EAVASYFKSYPRPKSYQEPPQKI*CEVGKA
Trigger: AGCCTTTCCCACCTCACAGCATATTTTCTGTGGGGG...TTCCTGGTAGGATTTTGGACGTGGATATGACTTGAAGTATGATGCCACAGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATTGGGGTCGCGTTGTGTaGTCTTTCCACTTCGCCCCA +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDWGRVV*SFHFAP
Trigger: TGGGGCGAAGTGGAAAGAGCACACAACGCGACCCCA...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000360982.2
CDS-3UTR CCA 90 bp TCAGTTTGGCTCTCTCTGGTGAATCCCACCCCCACACCATGTGATGCTCTGTGTGTTTTATCTGTCTCCTaGCCAATTTTCAGTAGACTG +
Preference number: 4 (lower is better)
Translates to: SVWLSLVNPTPTPCDALCVLSVS*PIFSRL
Trigger: CAGTCTACTGAAAATTGGCCAGGAGACAGATAAAAC...ACACAGAGCATCACATGGTGTGGGGGTGGGATTCACCAGAGAGAGCCAAACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GTGGTAGCCTCTTCTTCCCCACCATCTCATCAATTTATACGCATGATCTTATTTTGCTTTGTCCTCACGTaGTGGTTGGGGCAAGTCGGC +
Preference number: 4 (lower is better)
Translates to: VVASSSPPSHQFIRMILFCFVLT*WLGQVG
Trigger: GCCGACTTGCCCCAACCACCACGTGAGGACAAAGCA...AAATAAGATCATGCGTATAAATTGATGAGATGGTGGGGAAGAAGAGGCTACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp ACAGTGAGCCGAGATCAGGCCATTGCCCATTTCCTGGGCAACAAGAGTGAAACTGCCAGATTTAAATGTTaGCCTCTGCTACTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: TVSRDQAIAHFLGNKSETARFKC*PLLLPC
Trigger: ACAAGGAAGTAGCAGAGGCCAACATTTAAATCTGGC...AGTTTCACTCTTGTTGCCCAGGAAATGGGCAATGGCCTGATCTCGGCTCACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp ACCACTGTGCCTGGCCACCAGTACTTCTTACGTAATACTTGCTGTAGAGAATCTGGGCATCTGTACCAATaGAGGTCTGTAGCATCTGTC +
Preference number: 4 (lower is better)
Translates to: TTVPGHQYFLRNTCCRESGHLYQ*RSVASV
Trigger: GACAGATGCTACAGACCTCCATTGGTACAGATGCCC...AGATTCTCTACAGCAAGTATTACGTAAGAAGTACTGGTGGCCAGGCACAGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GAGGCTGTGGCATCATACTTCAAGTCATATCCACGTCCAAAATCCTACCAGGAAGATGGGATGGGAGGTTaGGCACATCTCATTATACCC +
Preference number: 4 (lower is better)
Translates to: EAVASYFKSYPRPKSYQEDGMGG*AHLIIP
Trigger: GGGTATAATGAGATGTGCCCAACCTCCCATCCCATC...TTCCTGGTAGGATTTTGGACGTGGATATGACTTGAAGTATGATGCCACAGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATCGGCAGAAACTCTGCTaGGAGGCGGGGTGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDRQKLC*EAGCFP
Trigger: TGGAAAACACCCCGCCTCCCAGCAGAGTTTCTGCCG...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000360982.2
CDS-3UTR TCA 90 bp TTAAACAGAAACCAGCCCTTTGGAAAGACCTGTTGCACCTCTGATTACAACCAACTGGTGTTGAACTCCTaGCCTCAAGTGATCCATCCG +
Preference number: 4 (lower is better)
Translates to: LNRNQPFGKTCCTSDYNQLVLNS*PQVIHP
Trigger: CGGATGGATCACTTGAGGTCAGGAGTTCAACACCAG...TTGGTTGTAATCAGAGGTGCAACAGGTCTTTCCAAAGGGCTGGTTTCTGTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp ACCACTGTGCCTGGCCACCAGTACTTCTTACGTAATACTTGCTGTAGAGAATCTTTGGTCTCAATCTCTTaGCCTCAGGTGATCCATCCA +
Preference number: 4 (lower is better)
Translates to: TTVPGHQYFLRNTCCRESLVSIS*PQVIHP
Trigger: TGGATGGATCACCTGAGGTCAAGAGATTGAGACCAA...AGATTCTCTACAGCAAGTATTACGTAAGAAGTACTGGTGGCCAGGCACAGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp ACAGTGAGCCGAGATCAGGCCATTGCCCATTTCCTGGGCAACAAGAGTGAAACTTTGCTTTGTCTTTCCTaGGCTTCAGTTTCCATATCA +
Preference number: 4 (lower is better)
Translates to: TVSRDQAIAHFLGNKSETLLCLS*ASVSIS
Trigger: TGATATGGAAACTGAAGCTCAGGAAAGACAAAGCAA...AGTTTCACTCTTGTTGCCCAGGAAATGGGCAATGGCCTGATCTCGGCTCACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp CCACTGACCAATGAGTGGACAAAGAAAGTGTGGTATATATACACACCACGGAATTGTCAGAGCATGTTGTaGGCACCTCTACCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: PLTNEWTKKVWYIYTPRNCQSML*APLPGC
Trigger: ACACCCAGGTAGAGGTGCTCACAACATGCTCTGACA...ATTCCGTGGTGTGTATATATACCACACTTTCTTTGTCCACTCATTGGTCAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GTTTGTGGAGGGTCTGCTTTCTGGTTCATGAACAGTGGCTTCTTGCTTTGTCCTCTCTGCTTCACCTTTTaGTGTCAGAGGGCTGAAAAT +
Preference number: 4 (lower is better)
Translates to: VCGGSAFWFMNSGFLLCPLCFTF*CQRAEN
Trigger: ATTTTCAGCCCTCTGACATCAAAAGGTGAAGCAGAG...AGGACAAAGCAAGAAGCCACTGTTCATGAACCAGAAAGCAGACCCTCCACAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp GTTTGTGGAGGGTCTGCTTTCTGGTTCATGAACAGTGGCTTCTTGCTTTGTCCTAAAGGGTCACCTTTTTaGTCACCATTACATGCAGGC +
Preference number: 4 (lower is better)
Translates to: VCGGSAFWFMNSGFLLCPKGSPF*SPLHAG
Trigger: GCCTGCATGTAATGGTGAGCAAAAAGGTGACCCTTT...AGGACAAAGCAAGAAGCCACTGTTCATGAACCAGAAAGCAGACCCTCCACAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp ACCACTGTGCCTGGCCACCAGTACTTCTTACGTAATACTTGCTGTAGAGAATCTGGCCTTGCTTCAGACTaGAAAGACCCTTGTACCTTT +
Preference number: 4 (lower is better)
Translates to: TTVPGHQYFLRNTCCRESGLASD*KDPCTF
Trigger: AAAGGTACAAGGGTCTTTGCAGTCTGAAGCAAGGCC...AGATTCTCTACAGCAAGTATTACGTAAGAAGTACTGGTGGCCAGGCACAGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp GTTTGTGGAGGGTCTGCTTTCTGGTTCATGAACAGTGGCTTCTTGCTTTGTCCTATTGGTATCAGAGTGTaGAGTCACAGAAGGAACTCC +
Preference number: 4 (lower is better)
Translates to: VCGGSAFWFMNSGFLLCPIGIRV*SHRRNS
Trigger: GGAGTTCCTTCTGTGACTGCACACTCTGATACCAAT...AGGACAAAGCAAGAAGCCACTGTTCATGAACCAGAAAGCAGACCCTCCACAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp GTTTGTGGAGGGTCTGCTTTCTGGTTCATGAACAGTGGCTTCTTGCTTTGTCCTCTCCATGAAACTTTCTaGTTAAGTAGCCCCCACAAC +
Preference number: 4 (lower is better)
Translates to: VCGGSAFWFMNSGFLLCPLHETF*LSSPHN
Trigger: GTTGTGGGGGCTACTTAAGCAGAAAGTTTCATGGAG...AGGACAAAGCAAGAAGCCACTGTTCATGAACCAGAAAGCAGACCCTCCACAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp ACAGTGAGCCGAGATCAGGCCATTGCCCATTTCCTGGGCAACAAGAGTGAAACTTCTGGTTCATGTACATaGCAAGCATTTAGGACACTA +
Preference number: 4 (lower is better)
Translates to: TVSRDQAIAHFLGNKSETSGSCT*QAFRTL
Trigger: TAGTGTCCTAAATGCTTGGCATGTACATGAACCAGA...AGTTTCACTCTTGTTGCCCAGGAAATGGGCAATGGCCTGATCTCGGCTCACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp GAGGCTGTGGCATCATACTTCAAGTCATATCCACGTCCAAAATCCTACCAGGAACTACCCCTCCCTTTTTaGTCTTTGACAACTGACCAG +
Preference number: 4 (lower is better)
Translates to: EAVASYFKSYPRPKSYQELPLPF*SLTTDQ
Trigger: CTGGTCAGTTGTCAAAGAGCAAAAAGGGAGGGGTAG...TTCCTGGTAGGATTTTGGACGTGGATATGACTTGAAGTATGATGCCACAGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATAACCGGCAGAAACTCTaGTGGGAGGCGGGGTGTTTT +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDNRQKL*WEAGCF
Trigger: AAAACACCCCGCCTCCCAGCAGAGTTTCTGCCGGTT...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360982.2
CDS-3UTR CCA 90 bp AGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATGGATGTTAATGTATCCAGCTTCTGCTGACTaGGCTGCAGCACTGAGCGCG +
Preference number: 4 (lower is better)
Translates to: STHVGKTVIINWAWMLMYPASAD*AAALSA
Trigger: CGCGCTCAGTGCTGCAGCCCAGTCAGCAGAAGCTGG...ATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp ACCACTGTGCCTGGCCACCAGTACTTCTTACGTAATACTTGCTGTAGAGAATCTGTCGATAAGATAGGATaGTTTTGCCTTGGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: TTVPGHQYFLRNTCCRESVDKIG*FCLGVS
Trigger: GGAGACCCCAAGGCAAAACCATCCTATCTTATCGAC...AGATTCTCTACAGCAAGTATTACGTAAGAAGTACTGGTGGCCAGGCACAGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp ACAGTGAGCCGAGATCAGGCCATTGCCCATTTCCTGGGCAACAAGAGTGAAACTGCAATTTATCAAGGTTaGTCACAACCAGCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: TVSRDQAIAHFLGNKSETAIYQG*SQPACF
Trigger: AAAACAGGCTGGTTGTGACCAACCTTGATAAATTGC...AGTTTCACTCTTGTTGCCCAGGAAATGGGCAATGGCCTGATCTCGGCTCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GGACAGTCAAGGACAGCGATGTGTAGGGAAAGTTTGGTTCATGCAAAAATGAATGTGAACCACTGTGCCTaGCCACCAGTACTTCTTACG +
Preference number: 4 (lower is better)
Translates to: GQSRTAMCRESLVHAKMNVNHCA*PPVLLT
Trigger: CGTAAGAAGTACTGGTGGCCAGGCACAGTGGTTCAC...ATTCATTTTTGCATGAACCAAACTTTCCCTACACATCGCTGTCCTTGACTGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GAGGCTGTGGCATCATACTTCAAGTCATATCCACGTCCAAAATCCTACCAGGAAAGGGTTTCACCATGTTaGCCAGGTTGGTCTCAATCT +
Preference number: 4 (lower is better)
Translates to: EAVASYFKSYPRPKSYQERVSPC*PGWSQS
Trigger: AGATTGAGACCAACCTGGCCAACATGGTGAAACCCT...TTCCTGGTAGGATTTTGGACGTGGATATGACTTGAAGTATGATGCCACAGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp ACAGTGAGCCGAGATCAGGCCATTGCCCATTTCCTGGGCAACAAGAGTGAAACTCATTCACCTATCCATTaGCCATGGTTACTATCATTG +
Preference number: 4 (lower is better)
Translates to: TVSRDQAIAHFLGNKSETHSPIH*PWLLSL
Trigger: CAATGATAGTAACCATGGCCAATGGATAGGTGAATG...AGTTTCACTCTTGTTGCCCAGGAAATGGGCAATGGCCTGATCTCGGCTCACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CAA 72 bp GTTCCCTTCATACACCTTCTCTTCATTTCCCTCTCCTaGCCAGCCCCTGCCAACCAACATTCTACTTTCTAT +
Preference number: 4 (lower is better)
Translates to: VPFIHLLFISLS*PAPANQHSTFY
Trigger: ATAGAAAGTAGAATGTTGGTTGGCAGGGGCTGGCAAGGAGAGGGAAATGAAGAGAAGGTGTATGAAGGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATCCTAGCAATCCAGGTTaGTCAGAGAGGACAGTAGCC +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDPSNPG*SERTVA
Trigger: GGCTACTGTCCTCTCTGATCAACCTGGATTGCTAGG...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR TCA 90 bp ATACAAGGGGCTCAGATTCTGCATCTTCTCCCCCTGACATCCCAGACAAGTGATGTTTTCCGATTTTTGTaGAGAAAGAGCTACGACCAA +
Preference number: 4 (lower is better)
Translates to: IQGAQILHLLPLTSQTSDVFRFL*RKSYDQ
Trigger: TTGGTCGTAGCTCTTTCTTCACAAAAATCGGAAAAC...ATCACTTGTCTGGGATGTCAGGGGGAGAAGATGCAGAATCTGAGCCCCTTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp ACAGTGAGCCGAGATCAGGCCATTGCCCATTTCCTGGGCAACAAGAGTGAAACTAAATCATATAATAGCTaGCCTGGTATCGAATGCTGT +
Preference number: 4 (lower is better)
Translates to: TVSRDQAIAHFLGNKSETKSYNS*PGIECC
Trigger: ACAGCATTCGATACCAGGTCAGCTATTATATGATTT...AGTTTCACTCTTGTTGCCCAGGAAATGGGCAATGGCCTGATCTCGGCTCACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GAGGCTGTGGCATCATACTTCAAGTCATATCCACGTCCAAAATCCTACCAGGAATTCAGGACGCATCACTaGGTAGTGCACAGTTTTAGT +
Preference number: 4 (lower is better)
Translates to: EAVASYFKSYPRPKSYQEFRTHH*VVHSFS
Trigger: ACTAAAACTGTGCACTACTCAGTGATGCGTCCTGAA...TTCCTGGTAGGATTTTGGACGTGGATATGACTTGAAGTATGATGCCACAGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATACTTCTAGGCTCAAATaGTACCTCTGGCTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDTSRLK*YLWLRL
Trigger: GAGGCGGAGCCAGAGGTATCATTTGAGCCTAGAAGT...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp CCACTGACCAATGAGTGGACAAAGAAAGTGTGGTATATATACACACCACGGAATAGCAACTTAGACCCATaGAGGCCAGAAAGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: PLTNEWTKKVWYIYTPRNSNLDP*RPESGH
Trigger: ATGCCCACTTTCTGGCCTTCATGGGTCTAAGTTGCT...ATTCCGTGGTGTGTATATATACCACACTTTCTTTGTCCACTCATTGGTCAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp ACCACTGTGCCTGGCCACCAGTACTTCTTACGTAATACTTGCTGTAGAGAATCTGGAAGGAACACTATATaGGCACATCGCCACATATGT +
Preference number: 4 (lower is better)
Translates to: TTVPGHQYFLRNTCCRESGRNTI*AHRHIC
Trigger: ACATATGTGGCGATGTGCTCATATAGTGTTCCTTCC...AGATTCTCTACAGCAAGTATTACGTAAGAAGTACTGGTGGCCAGGCACAGTGGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp ACAGTGAGCCGAGATCAGGCCATTGCCCATTTCCTGGGCAACAAGAGTGAAACTAGAATAGTTGAGAGTTaGGTGATCTATCCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: TVSRDQAIAHFLGNKSETRIVES*VIYPSN
Trigger: GTTTGAAGGATAGATCACTCAACTCTCAACTATTCT...AGTTTCACTCTTGTTGCCCAGGAAATGGGCAATGGCCTGATCTCGGCTCACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GTTTGTGGAGGGTCTGCTTTCTGGTTCATGAACAGTGGCTTCTTGCTTTGTCCTTCTAGATTAATGGATTaGTGGGCTATCAAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: VCGGSAFWFMNSGFLLCPSRLMD*WAIKGV
Trigger: CACTCCCTTGATAGCCCATCAATCCATTAATCTAGA...AGGACAAAGCAAGAAGCCACTGTTCATGAACCAGAAAGCAGACCCTCCACAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp TTAAACAGAAACCAGCCCTTTGGAAAGACCTGTTGCACCTCTGATTACAACCAACTTCACTCCTCATCTTaGGGGGTAAGTGGGCAAACA +
Preference number: 4 (lower is better)
Translates to: LNRNQPFGKTCCTSDYNQLHSSS*GVSGQT
Trigger: TGTTTGCCCACTTACCCCTCAAGATGAGGAGTGAAG...TTGGTTGTAATCAGAGGTGCAACAGGTCTTTCCAAAGGGCTGGTTTCTGTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp GTGGTAGCCTCTTCTTCCCCACCATCTCATCAATTTATACGCATGATCTTATTTTCACCATCAGAAGTTTaGTCATGGCTGGGCGTGGTG +
Preference number: 4 (lower is better)
Translates to: VVASSSPPSHQFIRMILFSPSEV*SWLGVV
Trigger: CACCACGCCCAGCCATGAGCAAACTTCTGATGGTGA...AAATAAGATCATGCGTATAAATTGATGAGATGGTGGGGAAGAAGAGGCTACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp ACCACTGTGCCTGGCCACCAGTACTTCTTACGTAATACTTGCTGTAGAGAATCTAAGTTGTGTACTACCTaGTCCTCAGCTTCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: TTVPGHQYFLRNTCCRESKLCTT*SSASAS
Trigger: TGAAGCTGAAGCTGAGGAGCAGGTAGTACACAACTT...AGATTCTCTACAGCAAGTATTACGTAAGAAGTACTGGTGGCCAGGCACAGTGGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATGTTCTTGTGGAGGGATaGTTTGGGTGCTCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDVLVEG*FGCSEE
Trigger: CTCCTCTGAGCACCCAAAGCATCCCTCCACAAGAAC...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp ATACAAGGGGCTCAGATTCTGCATCTTCTCCCCCTGACATCCCAGACAAGTGATCTCAACCTGTATTCATaGTCTGATGGTCCAACATTA +
Preference number: 4 (lower is better)
Translates to: IQGAQILHLLPLTSQTSDLNLYS*SDGPTL
Trigger: TAATGTTGGACCATCAGAGCATGAATACAGGTTGAG...ATCACTTGTCTGGGATGTCAGGGGGAGAAGATGCAGAATCTGAGCCCCTTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp TTAAACAGAAACCAGCCCTTTGGAAAGACCTGTTGCACCTCTGATTACAACCAACTCCTTGCCAGCCCCTaGCAACCAACATTCTACTTT +
Preference number: 4 (lower is better)
Translates to: LNRNQPFGKTCCTSDYNQLLASP*QPTFYF
Trigger: AAAGTAGAATGTTGGTTGGCAGGGGCTGGCAAGGAG...TTGGTTGTAATCAGAGGTGCAACAGGTCTTTCCAAAGGGCTGGTTTCTGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp CCACTGACCAATGAGTGGACAAAGAAAGTGTGGTATATATACACACCACGGAATAGGATGGTTTTGCCTTaGGGTCTCCACATGCCTTCT +
Preference number: 4 (lower is better)
Translates to: PLTNEWTKKVWYIYTPRNRMVLP*GLHMPS
Trigger: AGAAGGCATGTGGAGACCCCAAGGCAAAACCATCCT...ATTCCGTGGTGTGTATATATACCACACTTTCTTTGTCCACTCATTGGTCAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATCATCTGGCCAAGGCGTaGGTATTCTCTGTCACTTGC +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDHLAKA*VFSVTC
Trigger: GCAAGTGACAGAGAATACCCACGCCTTGGCCAGATG...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CCA 90 bp GAGGCTGTGGCATCATACTTCAAGTCATATCCACGTCCAAAATCCTACCAGGAAATGAGGCTCAATAACTaGGCATTTCTCCACTGGTCA +
Preference number: 4 (lower is better)
Translates to: EAVASYFKSYPRPKSYQEMRLNN*AFLHWS
Trigger: TGACCAGTGGAGAAATGCCCAGTTATTGAGCCTCAT...TTCCTGGTAGGATTTTGGACGTGGATATGACTTGAAGTATGATGCCACAGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GGACAGTCAAGGACAGCGATGTGTAGGGAAAGTTTGGTTCATGCAAAAATGAATACCAGAAATGAGACATaGCCCTCTGTGGCTAGGATC +
Preference number: 4 (lower is better)
Translates to: GQSRTAMCRESLVHAKMNTRNET*PSVARI
Trigger: GATCCTAGCCACAGAGGGCCATGTCTCATTTCTGGT...ATTCATTTTTGCATGAACCAAACTTTCCCTACACATCGCTGTCCTTGACTGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp TTAAACAGAAACCAGCCCTTTGGAAAGACCTGTTGCACCTCTGATTACAACCAAGTGTGCTGGCATATTTaGTGTTTGTGGAGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: LNRNQPFGKTCCTSDYNQVCWHI*CLWRVC
Trigger: GCAGACCCTCCACAAACACCAAATATGCCAGCACAC...TTGGTTGTAATCAGAGGTGCAACAGGTCTTTCCAAAGGGCTGGTTTCTGTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp ACCACTGTGCCTGGCCACCAGTACTTCTTACGTAATACTTGCTGTAGAGAATCTCAGGAAACTTCACAATaGTGCACAGTCCATACTCCA +
Preference number: 4 (lower is better)
Translates to: TTVPGHQYFLRNTCCRESQETSQ*CTVHTP
Trigger: TGGAGTATGGACTGTGCACCATTGTGAAGTTTCCTG...AGATTCTCTACAGCAAGTATTACGTAAGAAGTACTGGTGGCCAGGCACAGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GTTTGTGGAGGGTCTGCTTTCTGGTTCATGAACAGTGGCTTCTTGCTTTGTCCTGAAAAGTTCATGTGTTaGAAATTTGGTCCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: VCGGSAFWFMNSGFLLCPEKFMC*KFGPQC
Trigger: GCACTGGGGACCAAATTTCCAACACATGAACTTTTC...AGGACAAAGCAAGAAGCCACTGTTCATGAACCAGAAAGCAGACCCTCCACAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GTGGTAGCCTCTTCTTCCCCACCATCTCATCAATTTATACGCATGATCTTATTTCAGACTCTACTATCTTaGAGGACTGCAGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: VVASSSPPSHQFIRMILFQTLLS*RTAGAL
Trigger: CAGGGCACCTGCAGTCCTCCAAGATAGTAGAGTCTG...AAATAAGATCATGCGTATAAATTGATGAGATGGTGGGGAAGAAGAGGCTACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp ATACAAGGGGCTCAGATTCTGCATCTTCTCCCCCTGACATCCCAGACAAGTGATAGCTGGCTCTTTAACTaGTTCAGACTCTACTATCTT +
Preference number: 4 (lower is better)
Translates to: IQGAQILHLLPLTSQTSDSWLFN*FRLYYL
Trigger: AAGATAGTAGAGTCTGAACCAGTTAAAGAGCCAGCT...ATCACTTGTCTGGGATGTCAGGGGGAGAAGATGCAGAATCTGAGCCCCTTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp ACAGTGAGCCGAGATCAGGCCATTGCCCATTTCCTGGGCAACAAGAGTGAAACTATATCTGTTCTTTTGTaGCTGGCTTATTTCACTCAG +
Preference number: 4 (lower is better)
Translates to: TVSRDQAIAHFLGNKSETISVLL*LAYFTQ
Trigger: CTGAGTGAAATAAGCCAGCCACAAAAGAACAGATAT...AGTTTCACTCTTGTTGCCCAGGAAATGGGCAATGGCCTGATCTCGGCTCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATAGGATGGTTTTGCCTTaGGGTCTCCACATGCCTTCC +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDRMVLP*GLHMPS
Trigger: GGAAGGCATGTGGAGACCCCAAGGCAAAACCATCCT...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360982.2
3UTR CAA 72 bp TCACCTTTTGATGTCAGAGGGCTGAAAATCCCACCCTaGGATCATGCTAACACCACTAAGCCTTACATAGTG +
Preference number: 4 (lower is better)
Translates to: SPFDVRGLKIPP*DHANTTKPYIV
Trigger: CACTATGTAAGGCTTAGTGGTGTTAGCATGATCCAAGGGTGGGATTTTCAGCCCTCTGACATCAAAAGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CAA 72 bp TCCTGGCAATGCAATCTAATTTCTTCACTCCTCATCTaGAGGGGTAAGTGGGCAAACATCAAGAACACTGGC +
Preference number: 4 (lower is better)
Translates to: SWQCNLISSLLI*RGKWANIKNTG
Trigger: GCCAGTGTTCTTGATGTTTGCCCACTTACCCCTCAAGATGAGGAGTGAAGAAATTAGATTGCATTGCCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CAA 72 bp AATGTATACTCATATGTGCCCACAACAGTTGGAGCCTaGGGAACAAGGAAGTTACACTGCCTCGGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: NVYSYVPTTVGA*GTRKLHCLGKE
Trigger: TTCTTTGCCGAGGCAGTGTAACTTCCTTGTTCCCAAGGCTCCAACTGTTGTGGGCACATATGAGTATACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CAA 72 bp TGGATGTTAATGTATACTCATATGTGCCCACAACAGTaGGAGCCTTGGGAACAAGGAAGTTACACTGCCTCG +
Preference number: 4 (lower is better)
Translates to: WMLMYTHMCPQQ*EPWEQGSYTAS
Trigger: CGAGGCAGTGTAACTTCCTTGTTCCCAAGGCTCCAACTGTTGTGGGCACATATGAGTATACATTAACATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATGACGAAGTAGCCAGATaGTTTCATCACGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDDEVAR*FHHGQR
Trigger: CCTTTGCCCGTGATGAAATCATCTGGCTACTTCGTC...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR TCA 90 bp CCACTGACCAATGAGTGGACAAAGAAAGTGTGGTATATATACACACCACGGAATCTGCGATCTCCAATATaGTGTCGCTCTTCTGGACAT +
Preference number: 4 (lower is better)
Translates to: PLTNEWTKKVWYIYTPRNLRSPI*CRSSGH
Trigger: ATGTCCAGAAGAGCGACATCATATTGGAGATCGCAG...ATTCCGTGGTGTGTATATATACCACACTTTCTTTGTCCACTCATTGGTCAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATATAGCAGGGCTGTACTaGGACATCACATTACTGGCC +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDIAGLY*DITLLA
Trigger: GGCCAGTAATGTGATGTCTCAGTACAGCCCTGCTAT...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR TCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATCTGCAGCAATCTGGTTaGTGGCTTTGGCCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDLQQSG*WLWPSN
Trigger: ATTGCTTGGCCAAAGCCATCAACCAGATTGCTGCAG...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR TCA 90 bp AGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATGGATGTTAATGTATACTCCTGACCTCAAGTaGTCCATCCGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: STHVGKTVIINWAWMLMYTPDLK*SIRLGL
Trigger: GAGGCCAAGGCGGATGGATCACTTGAGGTCAGGAGT...ATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GTTTGTGGAGGGTCTGCTTTCTGGTTCATGAACAGTGGCTTCTTGCTTTGTCCTAGCATTTTGTCTATTTaGAAATTCAGGCTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: VCGGSAFWFMNSGFLLCPSILSI*KFRLRP
Trigger: AGGCCTGAGCCTGAATTTTCAAATAGACAAAATGCT...AGGACAAAGCAAGAAGCCACTGTTCATGAACCAGAAAGCAGACCCTCCACAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GTGGTAGCCTCTTCTTCCCCACCATCTCATCAATTTATACGCATGATCTTATTTCACTTAAACCAGAAATaGGACATGGCCCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: VVASSSPPSHQFIRMILFHLNQK*DMALCG
Trigger: GCCACAGAGGGCCATGTCTCATTTCTGGTTTAAGTG...AAATAAGATCATGCGTATAAATTGATGAGATGGTGGGGAAGAAGAGGCTACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GTGGTAGCCTCTTCTTCCCCACCATCTCATCAATTTATACGCATGATCTTATTTAAGGCTCCACTCTCATaGCCTAATCACCTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: VVASSSPPSHQFIRMILFKAPLS*PNHLPK
Trigger: CTTTGGGAGGTGATTAGGTCATGAGAGTGGAGCCTT...AAATAAGATCATGCGTATAAATTGATGAGATGGTGGGGAAGAAGAGGCTACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp TACATATCCAAATTCCTACTTTACCTCTCCAGAGATCACTGCCAACAAAGTTATTCTCTTGACCTCAGGTaGTCCATCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: YISKFLLYLSRDHCQQSYSLDLR*SIHLGL
Trigger: GAGGCCAAGGTGGATGGATCACCTGAGGTCAAGAGA...ATAACTTTGTTGGCAGTGATCTCTGGAGAGGTAAAGTAGGAATTTGGATATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GAGGCTGTGGCATCATACTTCAAGTCATATCCACGTCCAAAATCCTACCAGGAACGTGGAATGCCTTTTTaGTCTATTGCCAATGCTTTC +
Preference number: 4 (lower is better)
Translates to: EAVASYFKSYPRPKSYQERGMPF*SIANAF
Trigger: GAAAGCATTGGCAATAGATCAAAAAGGCATTCCACG...TTCCTGGTAGGATTTTGGACGTGGATATGACTTGAAGTATGATGCCACAGCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp CCACTGACCAATGAGTGGACAAAGAAAGTGTGGTATATATACACACCACGGAATTGCTCAGAGGAGCATTaGCTACCTTTTCCATCCCTT +
Preference number: 4 (lower is better)
Translates to: PLTNEWTKKVWYIYTPRNCSEEH*LPFPSL
Trigger: AAGGGATGGAAAAGGTAGTCAATGCTCCTCTGAGCA...ATTCCGTGGTGTGTATATATACCACACTTTCTTTGTCCACTCATTGGTCAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp TTAAACAGAAACCAGCCCTTTGGAAAGACCTGTTGCACCTCTGATTACAACCAATTACAACCAACCTCATaGCTACCCCTCCCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: LNRNQPFGKTCCTSDYNQLQPTS*LPLPFC
Trigger: GCAAAAAGGGAGGGGTAGTCATGAGGTTGGTTGTAA...TTGGTTGTAATCAGAGGTGCAACAGGTCTTTCCAAAGGGCTGGTTTCTGTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GTGGTAGCCTCTTCTTCCCCACCATCTCATCAATTTATACGCATGATCTTATTTGGAAACCTTAAAAACTaGGTTCCCGGCCATGATGGG +
Preference number: 4 (lower is better)
Translates to: VVASSSPPSHQFIRMILFGNLKN*VPGHDG
Trigger: CCCATCATGGCCGGGAACTCAGTTTTTAAGGTTTCC...AAATAAGATCATGCGTATAAATTGATGAGATGGTGGGGAAGAAGAGGCTACCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GGACAGTCAAGGACAGCGATGTGTAGGGAAAGTTTGGTTCATGCAAAAATGAATAGAAGCTTGGAGGTCTaGGTACACATGTGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: GQSRTAMCRESLVHAKMNRSLEV*VHMWGK
Trigger: TTTTCCCCACATGTGTACTCAGACCTCCAAGCTTCT...ATTCATTTTTGCATGAACCAAACTTTCCCTACACATCGCTGTCCTTGACTGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp ACAGTGAGCCGAGATCAGGCCATTGCCCATTTCCTGGGCAACAAGAGTGAAACTCTCATACACATTCATTaGAACCTTCATATCAGTTTC +
Preference number: 4 (lower is better)
Translates to: TVSRDQAIAHFLGNKSETLIHIH*NLHISF
Trigger: GAAACTGATATGAAGGTTGCAATGAATGTGTATGAG...AGTTTCACTCTTGTTGCCCAGGAAATGGGCAATGGCCTGATCTCGGCTCACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp GAGGCTGTGGCATCATACTTCAAGTCATATCCACGTCCAAAATCCTACCAGGAACTAAATGAGCTGCTTTaGCCTCCATGCCAACTATTA +
Preference number: 4 (lower is better)
Translates to: EAVASYFKSYPRPKSYQELNELL*PPCQLL
Trigger: TAATAGTTGGCATGGAGGGCAAAGCAGCTCATTTAG...TTCCTGGTAGGATTTTGGACGTGGATATGACTTGAAGTATGATGCCACAGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp ACAGTGAGCCGAGATCAGGCCATTGCCCATTTCCTGGGCAACAAGAGTGAAACTTTGCTCACCATTACATaGAGGCATCTAAAAATACTT +
Preference number: 4 (lower is better)
Translates to: TVSRDQAIAHFLGNKSETLLTIT*RHLKIL
Trigger: AAGTATTTTTAGATGCCTGCATGTAATGGTGAGCAA...AGTTTCACTCTTGTTGCCCAGGAAATGGGCAATGGCCTGATCTCGGCTCACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp GTTTGTGGAGGGTCTGCTTTCTGGTTCATGAACAGTGGCTTCTTGCTTTGTCCTTCATCACTGAGCTGCTaGTATTACAGGTGTAGAAAT +
Preference number: 4 (lower is better)
Translates to: VCGGSAFWFMNSGFLLCPSSLSC*YYRCRN
Trigger: ATTTCTACACCTGTAATAGCAGCAGCTCAGTGATGA...AGGACAAAGCAAGAAGCCACTGTTCATGAACCAGAAAGCAGACCCTCCACAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp TTAAACAGAAACCAGCCCTTTGGAAAGACCTGTTGCACCTCTGATTACAACCAACAGCTGCGAAAGAACTaGCAGTGCAATCTTGAGACT +
Preference number: 4 (lower is better)
Translates to: LNRNQPFGKTCCTSDYNQQLRKN*QCNLET
Trigger: AGTCTCAAGATTGCACTGGCAGTTCTTTCGCAGCTG...TTGGTTGTAATCAGAGGTGCAACAGGTCTTTCCAAAGGGCTGGTTTCTGTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp GTGGTAGCCTCTTCTTCCCCACCATCTCATCAATTTATACGCATGATCTTATTTTGGCTAGACCGACACTaGAGAGTTCCATTGGTAGAG +
Preference number: 4 (lower is better)
Translates to: VVASSSPPSHQFIRMILFWLDRH*RVPLVE
Trigger: CTCTACCAATGGAACTCTGCAGTGTCGGTCTAGCCA...AAATAAGATCATGCGTATAAATTGATGAGATGGTGGGGAAGAAGAGGCTACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp CCACTGACCAATGAGTGGACAAAGAAAGTGTGGTATATATACACACCACGGAATCCTCGGCAAAGAAAGTaGTTTTCTCCACTGGAACTG +
Preference number: 4 (lower is better)
Translates to: PLTNEWTKKVWYIYTPRNPRQRK*FSPLEL
Trigger: CAGTTCCAGTGGAGAAAAGCACTTTCTTTGCCGAGG...ATTCCGTGGTGTGTATATATACCACACTTTCTTTGTCCACTCATTGGTCAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp AGAGGAATTATACAATATCTGTTCTTTTGTGGCTGGCTTATTTCACTCAGCATATTGGAGGACTGCAGGTaGCCTGGTAGCCAAAAGGGC +
Preference number: 4 (lower is better)
Translates to: RGIIQYLFFCGWLISLSILEDCR*PGSQKG
Trigger: GCCCTTTTGGCTACCAGGGCACCTGCAGTCCTCCAA...TATGCTGAGTGAAATAAGCCAGCCACAAAAGAACAGATATTGTATAATTCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp ACAGTTAAATGGTTAAATGACTACCTACTTCAATGTGCTTTCTGGCAGCCAGAACATCTGGCCAAGGCGTaGGTATTCTCTGTCACTTGC +
Preference number: 4 (lower is better)
Translates to: TVKWLNDYLLQCAFWQPEHLAKA*VFSVTC
Trigger: GCAAGTGACAGAGAATACCCACGCCTTGGCCAGATG...TTCTGGCTGCCAGAAAGCACATTGAAGTAGGTAGTCATTTAACCATTTAACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp CCACTGACCAATGAGTGGACAAAGAAAGTGTGGTATATATACACACCACGGAATAAAGCTGCAGCAATCTaGTTGATGGCTTTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: PLTNEWTKKVWYIYTPRNKAAAI*LMALAK
Trigger: CTTGGCCAAAGCCATCAACCAGATTGCTGCAGCTTT...ATTCCGTGGTGTGTATATATACCACACTTTCTTTGTCCACTCATTGGTCAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATCCATGTTGGCCAGGTTaGTCTCAATCTCTTGACCTC +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDPCWPG*SQSLDL
Trigger: GAGGTCAAGAGATTGAGACCAACCTGGCCAACATGG...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GGACAGTCAAGGACAGCGATGTGTAGGGAAAGTTTGGTTCATGCAAAAATGAATGGCAACACAGCACAGTaGAAGGAACACTATATGAGC +
Preference number: 4 (lower is better)
Translates to: GQSRTAMCRESLVHAKMNGNTAQ*KEHYMS
Trigger: GCTCATATAGTGTTCCTTCCACTGTGCTGTGTTGCC...ATTCATTTTTGCATGAACCAAACTTTCCCTACACATCGCTGTCCTTGACTGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GAGGCTGTGGCATCATACTTCAAGTCATATCCACGTCCAAAATCCTACCAGGAATATAACCAAGTCTGTTaGAATGGATGGGGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: EAVASYFKSYPRPKSYQEYNQVC*NGWGGN
Trigger: ATTCCCACCCCATCCATTCCAACAGACTTGGTTATA...TTCCTGGTAGGATTTTGGACGTGGATATGACTTGAAGTATGATGCCACAGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATTTAAGAGTGGGCTGGTaGCTCCAAGCGCTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDLRVGW*LQALFP
Trigger: AGGAAAAAGCGCTTGGAGCCACCAGCCCACTCTTAA...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000360982.2
3UTR CAA 72 bp CACACTTCTAACTTCTCAAACATGCCAAGTTTGTGCTaGCCTTCTGGGTCTTTGCCTTTATTATTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: HTSNFSNMPSLC*PSGSLPLLFLP
Trigger: GGGGAGGAATAATAAAGGCAAAGACCCAGAAGGCAAGCACAAACTTGGCATGTTTGAGAAGTTAGAAGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CAA 72 bp TGTGTAATGTTGGGAGCAAGTAATGATTTTTCCTCTTaGTTCTTGTGGAGGGATGCTTTGGGTGCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: CVMLGASNDFSS*FLWRDALGAQR
Trigger: CCTCTGAGCACCCAAAGCATCCCTCCACAAGAACAAAGAGGAAAAATCATTACTTGCTCCCAACATTACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATTCTCCACTGGTCAGCTaGAAGATTCCTTCGAGGATA +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDSPLVS*KIPSRI
Trigger: TATCCTCGAAGGAATCTTTCAGCTGACCAGTGGAGA...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR TCA 90 bp GGACAGTCAAGGACAGCGATGTGTAGGGAAAGTTTGGTTCATGCAAAAATGAATAGGCAAGAGCTACTTTaGAGAGCTAGTTTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: GQSRTAMCRESLVHAKMNRQELL*RASFQR
Trigger: CCTTTGGAAACTAGCTCTTCAAAGTAGCTCTTGCCT...ATTCATTTTTGCATGAACCAAACTTTCCCTACACATCGCTGTCCTTGACTGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GGACAGTCAAGGACAGCGATGTGTAGGGAAAGTTTGGTTCATGCAAAAATGAATGGCATGTTATCTGCATaGCGAAGTAGCCAGATGATT +
Preference number: 4 (lower is better)
Translates to: GQSRTAMCRESLVHAKMNGMLSA*RSSQMI
Trigger: AATCATCTGGCTACTTCGTCATGCAGATAACATGCC...ATTCATTTTTGCATGAACCAAACTTTCCCTACACATCGCTGTCCTTGACTGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATTCTGCACGAGTTCATTaGGGACAACAGCATCAAAGC +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDSARVH*GQQHQS
Trigger: GCTTTGATGCTGTTGTCCTCAATGAACTCGTGCAGA...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR TCA 90 bp GTGGTAGCCTCTTCTTCCCCACCATCTCATCAATTTATACGCATGATCTTATTTTCTGCACGAGTTCATTaGGGACAACAGCATCAAAGC +
Preference number: 4 (lower is better)
Translates to: VVASSSPPSHQFIRMILFSARVH*GQQHQS
Trigger: GCTTTGATGCTGTTGTCCTCAATGAACTCGTGCAGA...AAATAAGATCATGCGTATAAATTGATGAGATGGTGGGGAAGAAGAGGCTACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GTTTGTGGAGGGTCTGCTTTCTGGTTCATGAACAGTGGCTTCTTGCTTTGTCCTAAATATGGAGAGATCTaGTGTTTCCACCAACATTTC +
Preference number: 4 (lower is better)
Translates to: VCGGSAFWFMNSGFLLCPKYGEI*CFHQHF
Trigger: GAAATGTTGGTGGAAACATCAGATCTCTCCATATTT...AGGACAAAGCAAGAAGCCACTGTTCATGAACCAGAAAGCAGACCCTCCACAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATCTGCGATCTCCAATATaGTGTCGCTCTTCTGGACAT +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDLRSPI*CRSSGH
Trigger: ATGTCCAGAAGAGCGACATCATATTGGAGATCGCAG...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR TCA 90 bp ACAGTTAAATGGTTAAATGACTACCTACTTCAATGTGCTTTCTGGCAGCCAGAACTGCAGCAATCTGGTTaGTGGCTTTGGCCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: TVKWLNDYLLQCAFWQPELQQSG*WLWPSN
Trigger: ATTGCTTGGCCAAAGCCATCAACCAGATTGCTGCAG...TTCTGGCTGCCAGAAAGCACATTGAAGTAGGTAGTCATTTAACCATTTAACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GAGGCTGTGGCATCATACTTCAAGTCATATCCACGTCCAAAATCCTACCAGGAAGGCCTTCAAATGAAATaGTGGTTCATGCTGTCATTT +
Preference number: 4 (lower is better)
Translates to: EAVASYFKSYPRPKSYQEGLQMK*WFMLSF
Trigger: AAATGACAGCATGAACCATCATTTCATTTGAAGGCC...TTCCTGGTAGGATTTTGGACGTGGATATGACTTGAAGTATGATGCCACAGCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GTGGTAGCCTCTTCTTCCCCACCATCTCATCAATTTATACGCATGATCTTATTTAACCTAAGTGCCCACTaGCCAATGAGTGGACAAAGA +
Preference number: 4 (lower is better)
Translates to: VVASSSPPSHQFIRMILFNLSAH*PMSGQR
Trigger: TCTTTGTCCACTCATTGGTCAGTGGGCACTTAGGTT...AAATAAGATCATGCGTATAAATTGATGAGATGGTGGGGAAGAAGAGGCTACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GAGGCTGTGGCATCATACTTCAAGTCATATCCACGTCCAAAATCCTACCAGGAACCTGTATTCATGCTCTaGTGGTCCAACATTATAACT +
Preference number: 4 (lower is better)
Translates to: EAVASYFKSYPRPKSYQEPVFML*WSNIIT
Trigger: AGTTATAATGTTGGACCATCAGAGCATGAATACAGG...TTCCTGGTAGGATTTTGGACGTGGATATGACTTGAAGTATGATGCCACAGCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp TTAAACAGAAACCAGCCCTTTGGAAAGACCTGTTGCACCTCTGATTACAACCAAGTAGGAAAGCCAGCATaGTTTGTGTTTCTGCATCCA +
Preference number: 4 (lower is better)
Translates to: LNRNQPFGKTCCTSDYNQVGKPA*FVFLHP
Trigger: TGGATGCAGAAACACAAATCATGCTGGCTTTCCTAC...TTGGTTGTAATCAGAGGTGCAACAGGTCTTTCCAAAGGGCTGGTTTCTGTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATAAGATAGGATGGTTTTaGCTTGGGGTCTCCACATGC +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDKIGWF*LGVSTC
Trigger: GCATGTGGAGACCCCAAGGCAAAACCATCCTATCTT...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR GCA 90 bp GTTTGTGGAGGGTCTGCTTTCTGGTTCATGAACAGTGGCTTCTTGCTTTGTCCTAATCCACTTTTCCATTaGATCCAAAGAGAGGTATTC +
Preference number: 4 (lower is better)
Translates to: VCGGSAFWFMNSGFLLCPNPLFH*IQREVF
Trigger: GAATACCTCTCTTTGGATGCAATGGAAAAGTGGATT...AGGACAAAGCAAGAAGCCACTGTTCATGAACCAGAAAGCAGACCCTCCACAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp GTTTGTGGAGGGTCTGCTTTCTGGTTCATGAACAGTGGCTTCTTGCTTTGTCCTAGCAGTGGTAGAGAATaGCTTATTTTCATCCTTATG +
Preference number: 4 (lower is better)
Translates to: VCGGSAFWFMNSGFLLCPSSGRE*LIFILM
Trigger: CATAAGGATGAAAATAAGGCATTCTCTACCACTGCT...AGGACAAAGCAAGAAGCCACTGTTCATGAACCAGAAAGCAGACCCTCCACAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp AGAGGAATTATACAATATCTGTTCTTTTGTGGCTGGCTTATTTCACTCAGCATAATGATCTCGGCTCACTaGAATCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: RGIIQYLFFCGWLISLSIMISAH*NLRLLG
Trigger: ACCCAGGAGGCGGAGATTGCAGTGAGCCGAGATCAT...TATGCTGAGTGAAATAAGCCAGCCACAAAAGAACAGATATTGTATAATTCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp CCACTGACCAATGAGTGGACAAAGAAAGTGTGGTATATATACACACCACGGAATACAAGGAAGTTACACTaGCTCGGCAAAGAAAGTGCT +
Preference number: 4 (lower is better)
Translates to: PLTNEWTKKVWYIYTPRNTRKLH*LGKESA
Trigger: AGCACTTTCTTTGCCGAGGCAGTGTAACTTCCTTGT...ATTCCGTGGTGTGTATATATACCACACTTTCTTTGTCCACTCATTGGTCAGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp AGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATGGATGTTAATGTATCTGTGGGACAACCCTTaGCACCCCACTCAAGCTACA +
Preference number: 4 (lower is better)
Translates to: STHVGKTVIINWAWMLMYLWDNP*HPTQAT
Trigger: TGTAGCTTGAGTGGGGTGGCAAGGGTTGTCCCACAG...ATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATCAAGTTCCCAAAAGTTaGTTTTCCGCACCACCCTTC +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDQVPKS*FSAPPF
Trigger: GAAGGGTGGTGCGGAAAAGCAACTTTTGGGAACTTG...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000360982.2
CDS-3UTR CCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATGTCGATAAGATAGGATaGTTTTGCCTTGGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDVDKIG*FCLGVS
Trigger: GGAGACCCCAAGGCAAAACCATCCTATCTTATCGAC...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATTGCTTGGGTAGCAACTaGTCACTAAGGGTACACTGT +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDCLGSN*SLRVHC
Trigger: ACAGTGTACCCTTAGTGACCAGTTGCTACCCAAGCA...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATAAAGCTGCAGCAATCTaGTTGATGGCTTTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDKAAAI*LMALAK
Trigger: CTTGGCCAAAGCCATCAACCAGATTGCTGCAGCTTT...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CCA 90 bp GTGGTAGCCTCTTCTTCCCCACCATCTCATCAATTTATACGCATGATCTTATTTTATAGTTCTGGAGGCTaGGAAGCCAATCAGTGTGCT +
Preference number: 4 (lower is better)
Translates to: VVASSSPPSHQFIRMILFYSSGG*EANQCA
Trigger: AGCACACTGATTGGCTTCCCAGCCTCCAGAACTATA...AAATAAGATCATGCGTATAAATTGATGAGATGGTGGGGAAGAAGAGGCTACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp ACCACTGTGCCTGGCCACCAGTACTTCTTACGTAATACTTGCTGTAGAGAATCTTGGACAAAGAAAGTGTaGTATATATACACACCACGG +
Preference number: 4 (lower is better)
Translates to: TTVPGHQYFLRNTCCRESWTKKV*YIYTPR
Trigger: CCGTGGTGTGTATATATACCACACTTTCTTTGTCCA...AGATTCTCTACAGCAAGTATTACGTAAGAAGTACTGGTGGCCAGGCACAGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GTTTGTGGAGGGTCTGCTTTCTGGTTCATGAACAGTGGCTTCTTGCTTTGTCCTATTTGTTTGAGGCTGTaGCATCATACTTCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: VCGGSAFWFMNSGFLLCPICLRL*HHTSSH
Trigger: ATGACTTGAAGTATGATGCCACAGCCTCAAACAAAT...AGGACAAAGCAAGAAGCCACTGTTCATGAACCAGAAAGCAGACCCTCCACAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GTGGTAGCCTCTTCTTCCCCACCATCTCATCAATTTATACGCATGATCTTATTTAGGCTTCACATAGGGTaGCTTGCAGCATTTAGAAGC +
Preference number: 4 (lower is better)
Translates to: VVASSSPPSHQFIRMILFRLHIG*LAAFRS
Trigger: GCTTCTAAATGCTGCAAGCCACCCTATGTGAAGCCT...AAATAAGATCATGCGTATAAATTGATGAGATGGTGGGGAAGAAGAGGCTACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp CCACTGACCAATGAGTGGACAAAGAAAGTGTGGTATATATACACACCACGGAATAAATATGCTGTGAGGTaGGAAAGGCTGATGGCTAGA +
Preference number: 4 (lower is better)
Translates to: PLTNEWTKKVWYIYTPRNKYAVR*ERLMAR
Trigger: TCTAGCCATCAGCCTTTCCCACCTCACAGCATATTT...ATTCCGTGGTGTGTATATATACCACACTTTCTTTGTCCACTCATTGGTCAGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp ACAGTTAAATGGTTAAATGACTACCTACTTCAATGTGCTTTCTGGCAGCCAGAACAGAAACCAGCCCTTTaGAAAGACCTGTTGCACCTC +
Preference number: 4 (lower is better)
Translates to: TVKWLNDYLLQCAFWQPEQKPAL*KDLLHL
Trigger: GAGGTGCAACAGGTCTTTCCAAAGGGCTGGTTTCTG...TTCTGGCTGCCAGAAAGCACATTGAAGTAGGTAGTCATTTAACCATTTAACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp TACATATCCAAATTCCTACTTTACCTCTCCAGAGATCACTGCCAACAAAGTTATAAACAGACCCTCTCCTaGCCAAGAGGACTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: YISKFLLYLSRDHCQQSYKQTLS*PRGLQG
Trigger: TCCCTGAAGTCCTCTTGGCCAGGAGAGGGTCTGTTT...ATAACTTTGTTGGCAGTGATCTCTGGAGAGGTAAAGTAGGAATTTGGATATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATCCAAGTCTGTTGGAATaGATGGGGTGGGAATTCAGT +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDPSLLE*MGWEFS
Trigger: ACTGAATTCCCACCCCATCCATTCCAACAGACTTGG...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATAGGCAAGAGCTACTTTaGAGAGCTAGTTTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDRQELL*RASFQR
Trigger: CCTTTGGAAACTAGCTCTTCAAAGTAGCTCTTGCCT...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR TCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATGGCATGTTATCTGCATaGCGAAGTAGCCAGATGATT +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDGMLSA*RSSQMI
Trigger: AATCATCTGGCTACTTCGTCATGCAGATAACATGCC...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR TCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATCTGCCACAAACACCATaGGAAGGCAGGCAATTTTAT +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDLPQTP*EGRQFY
Trigger: ATAAAATTGCCTGCCTTCTCATGGTGTTTGTGGCAG...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR TCA 90 bp ACCACTGTGCCTGGCCACCAGTACTTCTTACGTAATACTTGCTGTAGAGAATCTATGCCCTTTCACATATaGTTCCAAAGTGTACATATC +
Preference number: 4 (lower is better)
Translates to: TTVPGHQYFLRNTCCRESMPFHI*FQSVHI
Trigger: GATATGTACACTTTGGAATCATATGTGAAAGGGCAT...AGATTCTCTACAGCAAGTATTACGTAAGAAGTACTGGTGGCCAGGCACAGTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GTGGTAGCCTCTTCTTCCCCACCATCTCATCAATTTATACGCATGATCTTATTTGCTCAGGCCTTCAAATaGAATGATGGTTCATGCTGT +
Preference number: 4 (lower is better)
Translates to: VVASSSPPSHQFIRMILFAQAFK*NDGSCC
Trigger: ACAGCATGAACCATCATTTCATTTGAAGGCCTGAGC...AAATAAGATCATGCGTATAAATTGATGAGATGGTGGGGAAGAAGAGGCTACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATGTGAGCACGCTTCAGTaGAATTATATCACCACTGAC +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDVSTLQ*NYITTD
Trigger: GTCAGTGGTGATATAATTTCACTGAAGCGTGCTCAC...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp TTAAACAGAAACCAGCCCTTTGGAAAGACCTGTTGCACCTCTGATTACAACCAACACAGTTTTAGTCTGTaGGCACGCTTCAGTGAAATT +
Preference number: 4 (lower is better)
Translates to: LNRNQPFGKTCCTSDYNQHSFSL*ARFSEI
Trigger: AATTTCACTGAAGCGTGCTCACAGACTAAAACTGTG...TTGGTTGTAATCAGAGGTGCAACAGGTCTTTCCAAAGGGCTGGTTTCTGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GAGGCTGTGGCATCATACTTCAAGTCATATCCACGTCCAAAATCCTACCAGGAAGAATTCAGAATGAACTaGCATTCAGCATTAACCTGT +
Preference number: 4 (lower is better)
Translates to: EAVASYFKSYPRPKSYQEEFRMN*HSALTC
Trigger: ACAGGTTAATGCTGAATGTCAGTTCATTCTGAATTC...TTCCTGGTAGGATTTTGGACGTGGATATGACTTGAAGTATGATGCCACAGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GAGGCTGTGGCATCATACTTCAAGTCATATCCACGTCCAAAATCCTACCAGGAAAGGGCAAGTGATGTTTaGGCTTACTGTTTACATTAT +
Preference number: 4 (lower is better)
Translates to: EAVASYFKSYPRPKSYQERASDV*AYCLHY
Trigger: ATAATGTAAACAGTAAGCTCAAACATCACTTGCCCT...TTCCTGGTAGGATTTTGGACGTGGATATGACTTGAAGTATGATGCCACAGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp ACAGTTAAATGGTTAAATGACTACCTACTTCAATGTGCTTTCTGGCAGCCAGAATCTCTGTGTCATCACTaGGCTGCTGCTATTACAGGT +
Preference number: 4 (lower is better)
Translates to: TVKWLNDYLLQCAFWQPESLCHH*AAAITG
Trigger: ACCTGTAATAGCAGCAGCTCAGTGATGACACAGAGA...TTCTGGCTGCCAGAAAGCACATTGAAGTAGGTAGTCATTTAACCATTTAACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATTCCCTTTTTGCTCTTTaGCAACTGACCAGCATTCCT +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDSLFAL*QLTSIP
Trigger: AGGAATGCTGGTCAGTTGTCAAAGAGCAAAAAGGGA...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GGACAGTCAAGGACAGCGATGTGTAGGGAAAGTTTGGTTCATGCAAAAATGAATTCAAGCTACAGTTTTTaGTTGAGTAGGAAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GQSRTAMCRESLVHAKMNSSYSF*LSRKAS
Trigger: GCTGGCTTTCCTACTCAATCAAAAACTGTAGCTTGA...ATTCATTTTTGCATGAACCAAACTTTCCCTACACATCGCTGTCCTTGACTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATTTGCGTCTTTCTCTGTaGATTGAACCAGCATGTGAC +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDLRLSL*IEPACD
Trigger: GTCACATGCTGGTTCAATGCACAGAGAAAGACGCAA...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR GCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATAAGAGCTACGACCAATaGAGGATCAATCTCACAAGG +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDKSYDQ*RINLTR
Trigger: CCTTGTGAGATTGATCCTGCATTGGTCGTAGCTCTT...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR GCA 90 bp GTGGTAGCCTCTTCTTCCCCACCATCTCATCAATTTATACGCATGATCTTATTTAACATGCCAAGTTTGTaGTTGCCTTCTGGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: VVASSSPPSHQFIRMILFNMPSL*LPSGSL
Trigger: CAAAGACCCAGAAGGCAAGCACAAACTTGGCATGTT...AAATAAGATCATGCGTATAAATTGATGAGATGGTGGGGAAGAAGAGGCTACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp GAGGCTGTGGCATCATACTTCAAGTCATATCCACGTCCAAAATCCTACCAGGAACAGGGCCCTTTTGATTaGAAGAAATATAATCTAGTC +
Preference number: 4 (lower is better)
Translates to: EAVASYFKSYPRPKSYQEQGPFD*KKYNLV
Trigger: GACTAGATTATATTTCTTGCAATCAAAAGGGCCCTG...TTCCTGGTAGGATTTTGGACGTGGATATGACTTGAAGTATGATGCCACAGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp ACCACTGTGCCTGGCCACCAGTACTTCTTACGTAATACTTGCTGTAGAGAATCTATTTGTTTTACTGTCTaGCTCCTTCATCAGATGATG +
Preference number: 4 (lower is better)
Translates to: TTVPGHQYFLRNTCCRESICFTV*LLHQMM
Trigger: CATCATCTGATGAAGGAGGCAGACAGTAAAACAAAT...AGATTCTCTACAGCAAGTATTACGTAAGAAGTACTGGTGGCCAGGCACAGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp GGACAGTCAAGGACAGCGATGTGTAGGGAAAGTTTGGTTCATGCAAAAATGAATACATTCATGTTGCTGTaGAACAACCACCATCATCCA +
Preference number: 4 (lower is better)
Translates to: GQSRTAMCRESLVHAKMNTFMLL*NNHHHP
Trigger: TGGATGATGGTGGTTGTTGCACAGCAACATGAATGT...ATTCATTTTTGCATGAACCAAACTTTCCCTACACATCGCTGTCCTTGACTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATTGGGCATTTCTCCACTaGTCAGCTGAAAGATTCCTT +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDWAFLH*SAERFL
Trigger: AAGGAATCTTTCAGCTGACCAGTGGAGAAATGCCCA...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATATGAGGCTCAATAACTaGGCATTTCTCCACTGGTCA +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDMRLNN*AFLHWS
Trigger: TGACCAGTGGAGAAATGCCCAGTTATTGAGCCTCAT...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATAGTGTCGGACTGTGCTaGATTAAGCATTGTACTAGG +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDSVGLC*IKHCTR
Trigger: CCTAGTACAATGCTTAATCCAGCACAGTCCGACACT...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CCA 90 bp GGACAGTCAAGGACAGCGATGTGTAGGGAAAGTTTGGTTCATGCAAAAATGAATGAGACATCACATTACTaGCCAGTGTTGGCAAAGAAA +
Preference number: 4 (lower is better)
Translates to: GQSRTAMCRESLVHAKMNETSHY*PVLAKK
Trigger: TTTCTTTGCCAACACTGGCCAGTAATGTGATGTCTC...ATTCATTTTTGCATGAACCAAACTTTCCCTACACATCGCTGTCCTTGACTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp TACATATCCAAATTCCTACTTTACCTCTCCAGAGATCACTGCCAACAAAGTTATCCCTCAGCCCACTTGTaGTTCCTTCTAATCCTTCAC +
Preference number: 4 (lower is better)
Translates to: YISKFLLYLSRDHCQQSYPSAHL*FLLILH
Trigger: GTGAAGGATTAGAAGGAACCACAAGTGGGCTGAGGG...ATAACTTTGTTGGCAGTGATCTCTGGAGAGGTAAAGTAGGAATTTGGATATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GAGGCTGTGGCATCATACTTCAAGTCATATCCACGTCCAAAATCCTACCAGGAATTTGTGCTTGCCTTCTaGGTCTTTGCCTTTATTATT +
Preference number: 4 (lower is better)
Translates to: EAVASYFKSYPRPKSYQEFVLAF*VFAFII
Trigger: AATAATAAAGGCAAAGACCCAGAAGGCAAGCACAAA...TTCCTGGTAGGATTTTGGACGTGGATATGACTTGAAGTATGATGCCACAGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GTGGTAGCCTCTTCTTCCCCACCATCTCATCAATTTATACGCATGATCTTATTTCTGGTTCATGAACAGTaGCTTCTTGCTTTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: VVASSSPPSHQFIRMILFLVHEQ*LLALSS
Trigger: TGAGGACAAAGCAAGAAGCCACTGTTCATGAACCAG...AAATAAGATCATGCGTATAAATTGATGAGATGGTGGGGAAGAAGAGGCTACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp CCACTGACCAATGAGTGGACAAAGAAAGTGTGGTATATATACACACCACGGAATGACCCTTGTACCTTTTaGCTGAAGGTAAGAATTCAG +
Preference number: 4 (lower is better)
Translates to: PLTNEWTKKVWYIYTPRNDPCTF*LKVRIQ
Trigger: CTGAATTCTTACCTTCAGCCAAAAGGTACAAGGGTC...ATTCCGTGGTGTGTATATATACCACACTTTCTTTGTCCACTCATTGGTCAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATCAGCAATCCTACTACTaGGTATCTACCCAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDQQSYY*VSTQRK
Trigger: CTTCCTTTGGGTAGATACCCAGTAGTAGGATTGCTG...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATTTCTATGAGCCTTATTaGTCCTCCCTGTACGATCAG +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDFYEPY*SSLYDQ
Trigger: CTGATCGTACAGGGAGGACCAATAAGGCTCATAGAA...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp CCACTGACCAATGAGTGGACAAAGAAAGTGTGGTATATATACACACCACGGAATATAGTTTATGTGAAATaGGGAAGGCAAGTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: PLTNEWTKKVWYIYTPRNIVYVK*GRQVEG
Trigger: TCCCTCCACTTGCCTTCCCCATTTCACATAAACTAT...ATTCCGTGGTGTGTATATATACCACACTTTCTTTGTCCACTCATTGGTCAGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp ACAGTTAAATGGTTAAATGACTACCTACTTCAATGTGCTTTCTGGCAGCCAGAACATGTGTTGGAAATTTaGTCCCCAGTGCAGCAGTGT +
Preference number: 4 (lower is better)
Translates to: TVKWLNDYLLQCAFWQPEHVLEI*SPVQQC
Trigger: ACACTGCTGCACTGGGGACCAAATTTCCAACACATG...TTCTGGCTGCCAGAAAGCACATTGAAGTAGGTAGTCATTTAACCATTTAACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GAGGCTGTGGCATCATACTTCAAGTCATATCCACGTCCAAAATCCTACCAGGAACCTATCCATTGGCCATaGTTACTATCATTGAAACTT +
Preference number: 4 (lower is better)
Translates to: EAVASYFKSYPRPKSYQEPIHWP*LLSLKL
Trigger: AAGTTTCAATGATAGTAACCATGGCCAATGGATAGG...TTCCTGGTAGGATTTTGGACGTGGATATGACTTGAAGTATGATGCCACAGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp ACCACTGTGCCTGGCCACCAGTACTTCTTACGTAATACTTGCTGTAGAGAATCTAAACAGAACCGCTTTTaGAGAAACTTGCCCTTATAT +
Preference number: 4 (lower is better)
Translates to: TTVPGHQYFLRNTCCRESKQNRF*RNLPLY
Trigger: ATATAAGGGCAAGTTTCTCCAAAAGCGGTTCTGTTT...AGATTCTCTACAGCAAGTATTACGTAAGAAGTACTGGTGGCCAGGCACAGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GGACAGTCAAGGACAGCGATGTGTAGGGAAAGTTTGGTTCATGCAAAAATGAATATCTTGAGGGGTAAGTaGGCAAACATCAAGAACACT +
Preference number: 4 (lower is better)
Translates to: GQSRTAMCRESLVHAKMNILRGK*ANIKNT
Trigger: AGTGTTCTTGATGTTTGCCCACTTACCCCTCAAGAT...ATTCATTTTTGCATGAACCAAACTTTCCCTACACATCGCTGTCCTTGACTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp ACAGTTAAATGGTTAAATGACTACCTACTTCAATGTGCTTTCTGGCAGCCAGAATTGGAATGGATGGGGTaGGAATTCAGTGAAGGCCAA +
Preference number: 4 (lower is better)
Translates to: TVKWLNDYLLQCAFWQPELEWMG*EFSEGQ
Trigger: TTGGCCTTCACTGAATTCCCACCCCATCCATTCCAA...TTCTGGCTGCCAGAAAGCACATTGAAGTAGGTAGTCATTTAACCATTTAACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp TTAAACAGAAACCAGCCCTTTGGAAAGACCTGTTGCACCTCTGATTACAACCAACTATATGGCCATTGCTaGCTTGTCGTAACAAAGTTT +
Preference number: 4 (lower is better)
Translates to: LNRNQPFGKTCCTSDYNQLYGHC*LVVTKF
Trigger: AAACTTTGTTACGACAAGTCAGCAATGGCCATATAG...TTGGTTGTAATCAGAGGTGCAACAGGTCTTTCCAAAGGGCTGGTTTCTGTTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp AGAGGAATTATACAATATCTGTTCTTTTGTGGCTGGCTTATTTCACTCAGCATAATAGCAGGGCTGTACTaGGACATCACATTACTGGCC +
Preference number: 4 (lower is better)
Translates to: RGIIQYLFFCGWLISLSIIAGLY*DITLLA
Trigger: GGCCAGTAATGTGATGTCTCAGTACAGCCCTGCTAT...TATGCTGAGTGAAATAAGCCAGCCACAAAAGAACAGATATTGTATAATTCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATCATATACAAAGCTGCTaGGAAACAGCCTCAACAATG +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDHIQSC*ETASTM
Trigger: CATTGTTGAGGCTGTTTCTCAGCAGCTTTGTATATG...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GTGGTAGCCTCTTCTTCCCCACCATCTCATCAATTTATACGCATGATCTTATTTTCAGATTTCAACATATaGATTTTGTGGCCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: VVASSSPPSHQFIRMILFSDFNI*ILWPGG
Trigger: TCCCCCTGGCCACAAAATTCATATGTTGAAATCTGA...AAATAAGATCATGCGTATAAATTGATGAGATGGTGGGGAAGAAGAGGCTACCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp AGAGGAATTATACAATATCTGTTCTTTTGTGGCTGGCTTATTTCACTCAGCATAAGCTGCCTGTATCTCTaGTGCTTCTCCACAGGAACA +
Preference number: 4 (lower is better)
Translates to: RGIIQYLFFCGWLISLSISCLYL*CFSTGT
Trigger: TGTTCCTGTGGAGAAGCATCAGAGATACAGGCAGCT...TATGCTGAGTGAAATAAGCCAGCCACAAAAGAACAGATATTGTATAATTCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GTGGTAGCCTCTTCTTCCCCACCATCTCATCAATTTATACGCATGATCTTATTTCTCTCTATGTGGCAATaGGATACAAGTGCCATCTTT +
Preference number: 4 (lower is better)
Translates to: VVASSSPPSHQFIRMILFLSMWQ*DTSAIF
Trigger: AAAGATGGCACTTGTATCTCATTGCCACATAGAGAG...AAATAAGATCATGCGTATAAATTGATGAGATGGTGGGGAAGAAGAGGCTACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GTGGTAGCCTCTTCTTCCCCACCATCTCATCAATTTATACGCATGATCTTATTTCAAAGAGTTTTCACATaGGCTCTCTATGTGGCAATG +
Preference number: 4 (lower is better)
Translates to: VVASSSPPSHQFIRMILFQRVFT*ALYVAM
Trigger: CATTGCCACATAGAGAGCTCATGTGAAAACTCTTTG...AAATAAGATCATGCGTATAAATTGATGAGATGGTGGGGAAGAAGAGGCTACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATCATAGTGTCGGACTGTaGTGGATTAAGCATTGTACT +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDHSVGL*WIKHCT
Trigger: AGTACAATGCTTAATCCAGCACAGTCCGACACTATG...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR GCA 90 bp TACATATCCAAATTCCTACTTTACCTCTCCAGAGATCACTGCCAACAAAGTTATCTGGCAGCCAGAATCTaGATGCAATCAATGACCATG +
Preference number: 4 (lower is better)
Translates to: YISKFLLYLSRDHCQQSYLAARI*MQSMTM
Trigger: CATGGTCATTGATTGCATGCAGATTCTGGCTGCCAG...ATAACTTTGTTGGCAGTGATCTCTGGAGAGGTAAAGTAGGAATTTGGATATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp ACAGTTAAATGGTTAAATGACTACCTACTTCAATGTGCTTTCTGGCAGCCAGAACTCTCCTTTTCCCTCTaGCATGTAAGAAGTACCTTG +
Preference number: 4 (lower is better)
Translates to: TVKWLNDYLLQCAFWQPELSFSL*HVRSTL
Trigger: CAAGGTACTTCTTACATGGCAGAGGGAAAAGGAGAG...TTCTGGCTGCCAGAAAGCACATTGAAGTAGGTAGTCATTTAACCATTTAACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp TACATATCCAAATTCCTACTTTACCTCTCCAGAGATCACTGCCAACAAAGTTATAGAAACAGTGGTTTCTaGAAAGCTGTGGTAGCTGGC +
Preference number: 4 (lower is better)
Translates to: YISKFLLYLSRDHCQQSYRNSGF*KAVVAG
Trigger: GCCAGCTACCACAGCTTTGCAGAAACCACTGTTTCT...ATAACTTTGTTGGCAGTGATCTCTGGAGAGGTAAAGTAGGAATTTGGATATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp ACAGTTAAATGGTTAAATGACTACCTACTTCAATGTGCTTTCTGGCAGCCAGAATGGGCATTTCTCCACTaGTCAGCTGAAAGATTCCTT +
Preference number: 4 (lower is better)
Translates to: TVKWLNDYLLQCAFWQPEWAFLH*SAERFL
Trigger: AAGGAATCTTTCAGCTGACCAGTGGAGAAATGCCCA...TTCTGGCTGCCAGAAAGCACATTGAAGTAGGTAGTCATTTAACCATTTAACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATAAACAAAAAGTGCCTTaGGACCTAGCAATCCAGGTT +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDKQKVP*DLAIQV
Trigger: AACCTGGATTGCTAGGTCCCAAGGCACTTTTTGTTT...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CCA 90 bp GGACAGTCAAGGACAGCGATGTGTAGGGAAAGTTTGGTTCATGCAAAAATGAATGATTTCGAGCTTGTTTaGCCATTTCATCTAGGAACA +
Preference number: 4 (lower is better)
Translates to: GQSRTAMCRESLVHAKMNDFELV*PFHLGT
Trigger: TGTTCCTAGATGAAATGGCCAAACAAGCTCGAAATC...ATTCATTTTTGCATGAACCAAACTTTCCCTACACATCGCTGTCCTTGACTGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GAGGCTGTGGCATCATACTTCAAGTCATATCCACGTCCAAAATCCTACCAGGAACATATCAGTTTCCCTTaGAATGTGATCCTTAAAATC +
Preference number: 4 (lower is better)
Translates to: EAVASYFKSYPRPKSYQEHISFP*NVILKI
Trigger: GATTTTAAGGATCACATTCCAAGGGAAACTGATATG...TTCCTGGTAGGATTTTGGACGTGGATATGACTTGAAGTATGATGCCACAGCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATGAGACATCACATTACTaGCCAGTGTTGGCAAAGAAA +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDETSHY*PVLAKK
Trigger: TTTCTTTGCCAACACTGGCCAGTAATGTGATGTCTC...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CCA 90 bp ACCACTGTGCCTGGCCACCAGTACTTCTTACGTAATACTTGCTGTAGAGAATCTACAGGCCAGTATGTATaGTATGATCACATTAATGTA +
Preference number: 4 (lower is better)
Translates to: TTVPGHQYFLRNTCCRESTGQYV*YDHINV
Trigger: TACATTAATGTGATCATACCATACATACTGGCCTGT...AGATTCTCTACAGCAAGTATTACGTAAGAAGTACTGGTGGCCAGGCACAGTGGT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp AGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATGGATGTTAATGTATGAGAGGTGGGACTTCTaGGAGGTGATTGGTTCACAA +
Preference number: 4 (lower is better)
Translates to: STHVGKTVIINWAWMLMYERWDF*EVIGSQ
Trigger: TTGTGAACCAATCACCTCCCAGAAGTCCCACCTCTC...ATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATAGTCATCCCAACAATTaGCTTGGTAAAGCGTATTTC +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDSHPNN*LGKAYF
Trigger: GAAATACGCTTTACCAAGTCAATTGTTGGGATGACT...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR TCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATATTTCCTGTGTGGCTTaGTTATACATAGTCATCCCA +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDISCVA*LYIVIP
Trigger: TGGGATGACTATGTATAATCAAGCCACACAGGAAAT...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR TCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATCACATAGTTTTCTATTaGCTGGAGTACGGTCATGTA +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDHIVFY*LEYGHV
Trigger: TACATGACCGTACTCCAGTCAATAGAAAACTATGTG...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR TCA 90 bp GTGGTAGCCTCTTCTTCCCCACCATCTCATCAATTTATACGCATGATCTTATTTCACATAGTTTTCTATTaGCTGGAGTACGGTCATGTA +
Preference number: 4 (lower is better)
Translates to: VVASSSPPSHQFIRMILFHIVFY*LEYGHV
Trigger: TACATGACCGTACTCCAGTCAATAGAAAACTATGTG...AAATAAGATCATGCGTATAAATTGATGAGATGGTGGGGAAGAAGAGGCTACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATCTATATGGCCATTGCTaGCTTGTCGTAACAAAGTTT +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDLYGHC*LVVTKF
Trigger: AAACTTTGTTACGACAAGTCAGCAATGGCCATATAG...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR TCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATGTTTTCCGATTTTTGTaGAGAAAGAGCTACGACCAA +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDVFRFL*RKSYDQ
Trigger: TTGGTCGTAGCTCTTTCTTCACAAAAATCGGAAAAC...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR TCA 90 bp GGACAGTCAAGGACAGCGATGTGTAGGGAAAGTTTGGTTCATGCAAAAATGAATAACTCAGTAATTTTATaGCACTGGGGCAAGGAATTT +
Preference number: 4 (lower is better)
Translates to: GQSRTAMCRESLVHAKMNNSVIL*HWGKEF
Trigger: AAATTCCTTGCCCCAGTGTCATAAAATTACTGAGTT...ATTCATTTTTGCATGAACCAAACTTTCCCTACACATCGCTGTCCTTGACTGTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp TTAAACAGAAACCAGCCCTTTGGAAAGACCTGTTGCACCTCTGATTACAACCAATTCAGGACAATGACCTaGGTAGTCACTTTGAAATTT +
Preference number: 4 (lower is better)
Translates to: LNRNQPFGKTCCTSDYNQFRTMT*VVTLKF
Trigger: AAATTTCAAAGTGACTACTCAGGTCATTGTCCTGAA...TTGGTTGTAATCAGAGGTGCAACAGGTCTTTCCAAAGGGCTGGTTTCTGTTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp AGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATGGATGTTAATGTATAAGATAGGATGGTTTTaGCTTGGGGTCTCCACATGC +
Preference number: 4 (lower is better)
Translates to: STHVGKTVIINWAWMLMYKIGWF*LGVSTC
Trigger: GCATGTGGAGACCCCAAGGCAAAACCATCCTATCTT...ATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATCAAACAGAAAGATTCTaGACGAGTTCATTGAGGACA +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDQTERF*TSSLRT
Trigger: TGTCCTCAATGAACTCGTGCAGAATCTTTCTGTTTG...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR GCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATCATTGCAGGAAAATATaGTATATGGCCATTGCTGAC +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDHCRKI*YMAIAD
Trigger: GTCAGCAATGGCCATATAGCATATTTTCCTGCAATG...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR GCA 90 bp TTAAACAGAAACCAGCCCTTTGGAAAGACCTGTTGCACCTCTGATTACAACCAACCAAGGCAACAAAAATaGGTGCTTATCTTGATTAAG +
Preference number: 4 (lower is better)
Translates to: LNRNQPFGKTCCTSDYNQPRQQK*VLILIK
Trigger: CTTAATCAAGATAAGCACGCATTTTTGTTGCCTTGG...TTGGTTGTAATCAGAGGTGCAACAGGTCTTTCCAAAGGGCTGGTTTCTGTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp TTAAACAGAAACCAGCCCTTTGGAAAGACCTGTTGCACCTCTGATTACAACCAAGCCTTTTTGATCTATTaGCAATGCTTTCACCTTTTG +
Preference number: 4 (lower is better)
Translates to: LNRNQPFGKTCCTSDYNQAFLIY*QCFHLL
Trigger: CAAAAGGTGAAAGCATTGGCAATAGATCAAAAAGGC...TTGGTTGTAATCAGAGGTGCAACAGGTCTTTCCAAAGGGCTGGTTTCTGTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp TTAAACAGAAACCAGCCCTTTGGAAAGACCTGTTGCACCTCTGATTACAACCAACATGATTTGTGTTTCTaGATCCAGGCAAATGTACTA +
Preference number: 4 (lower is better)
Translates to: LNRNQPFGKTCCTSDYNQHDLCF*IQANVL
Trigger: TAGTACATTTGCCTGGATGCAGAAACACAAATCATG...TTGGTTGTAATCAGAGGTGCAACAGGTCTTTCCAAAGGGCTGGTTTCTGTTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATGAAAGAGACTTGCTATaGGGTACAAATTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDERDLL*GTNSSI
Trigger: GATGGAAGAATTTGTACCCCATAGCAAGTCTCTTTC...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATGATTTCGAGCTTGTTTaGCCATTTCATCTAGGAACA +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDDFELV*PFHLGT
Trigger: TGTTCCTAGATGAAATGGCCAAACAAGCTCGAAATC...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATGCAATTTATCAAGGTTaGTCACAACCAGCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDAIYQG*SQPACF
Trigger: AAAACAGGCTGGTTGTGACCAACCTTGATAAATTGC...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATGTTTTATCTGTCTCCTaGCCAATTTTCAGTAGACTG +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDVLSVS*PIFSRL
Trigger: CAGTCTACTGAAAATTGGCCAGGAGACAGATAAAAC...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CCA 90 bp GTGGTAGCCTCTTCTTCCCCACCATCTCATCAATTTATACGCATGATCTTATTTACAATGCATACTACCTaGGTGACAGGTACACTAAAA +
Preference number: 4 (lower is better)
Translates to: VVASSSPPSHQFIRMILFTMHTT*VTGTLK
Trigger: TTTTAGTGTACCTGTCACCCAGGTAGTATGCATTGT...AAATAAGATCATGCGTATAAATTGATGAGATGGTGGGGAAGAAGAGGCTACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GTGGTAGCCTCTTCTTCCCCACCATCTCATCAATTTATACGCATGATCTTATTTGTTCTCACTTGTAAGTaGGAGCTAAGCTATGTGTAT +
Preference number: 4 (lower is better)
Translates to: VVASSSPPSHQFIRMILFVLTCK*ELSYVY
Trigger: ATACACATAGCTTAGCTCCCACTTACAAGTGAGAAC...AAATAAGATCATGCGTATAAATTGATGAGATGGTGGGGAAGAAGAGGCTACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp AGAGGAATTATACAATATCTGTTCTTTTGTGGCTGGCTTATTTCACTCAGCATATCCTCTTTGTTCTTGTaGAGGGATGCTTTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: RGIIQYLFFCGWLISLSISSLFL*RDALGA
Trigger: AGCACCCAAAGCATCCCTCCACAAGAACAAAGAGGA...TATGCTGAGTGAAATAAGCCAGCCACAAAAGAACAGATATTGTATAATTCCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp AGAGGAATTATACAATATCTGTTCTTTTGTGGCTGGCTTATTTCACTCAGCATAAAGTTAGTCCATGTTTaGTGGAAAGGGGTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: RGIIQYLFFCGWLISLSIKLVHV*WKGVLS
Trigger: GCTGAGGACCCCTTTCCACCAAACATGGACTAACTT...TATGCTGAGTGAAATAAGCCAGCCACAAAAGAACAGATATTGTATAATTCCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATCGAGGATATACCATTTaGAGAGAAATTAGTGCATCT +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDRGYTI*REISAS
Trigger: AGATGCACTAATTTCTCTTCAAATGGTATATCCTCG...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR TCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATAAATATGGAGAGATCTaGTGTTTCCACCAACATTTC +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDKYGEI*CFHQHF
Trigger: GAAATGTTGGTGGAAACATCAGATCTCTCCATATTT...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR TCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATTCTTCCAGCTACAAATaGCTAAAATGCTCCATCATT +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDSSSYK*LKCSII
Trigger: AATGATGGAGCATTTTAGTCATTTGTAGCTGGAAGA...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp AGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATGGATGTTAATGTATGACATCCCAGACAAGTaGTTTGTCTCATTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: STHVGKTVIINWAWMLMYDIPDK*FVSLGE
Trigger: TTCTCCCAATGAGACAAATCACTTGTCTGGGATGTC...ATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATCATCTGAAAGAGACTTaGTATGGGGTACAAATTCTT +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDHLKET*YGVQIL
Trigger: AAGAATTTGTACCCCATAGCAAGTCTCTTTCAGATG...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR GCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATAATCCACTTTTCCATTaGATCCAAAGAGAGGTATTC +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDNPLFH*IQREVF
Trigger: GAATACCTCTCTTTGGATGCAATGGAAAAGTGGATT...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR GCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATGTATTTCCTCACATGTaGTCTAAGTTCTTCCATGTA +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDVFPHM*SKFFHV
Trigger: TACATGGAAGAACTTAGAGCACATGTGAGGAAATAC...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR GCA 90 bp GTGGTAGCCTCTTCTTCCCCACCATCTCATCAATTTATACGCATGATCTTATTTGTATTTCCTCACATGTaGTCTAAGTTCTTCCATGTA +
Preference number: 4 (lower is better)
Translates to: VVASSSPPSHQFIRMILFVFPHM*SKFFHV
Trigger: TACATGGAAGAACTTAGAGCACATGTGAGGAAATAC...AAATAAGATCATGCGTATAAATTGATGAGATGGTGGGGAAGAAGAGGCTACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp AGAGGAATTATACAATATCTGTTCTTTTGTGGCTGGCTTATTTCACTCAGCATAAAGAGCTACGACCAATaGAGGATCAATCTCACAAGG +
Preference number: 4 (lower is better)
Translates to: RGIIQYLFFCGWLISLSIKSYDQ*RINLTR
Trigger: CCTTGTGAGATTGATCCTGCATTGGTCGTAGCTCTT...TATGCTGAGTGAAATAAGCCAGCCACAAAAGAACAGATATTGTATAATTCCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATCCAAGGCAACAAAAATaGGTGCTTATCTTGATTAAG +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDPRQQK*VLILIK
Trigger: CTTAATCAAGATAAGCACGCATTTTTGTTGCCTTGG...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR GCA 90 bp TACATATCCAAATTCCTACTTTACCTCTCCAGAGATCACTGCCAACAAAGTTATCTCTCCAGAGATCACTaGCAACAAAGTTATTACCTC +
Preference number: 4 (lower is better)
Translates to: YISKFLLYLSRDHCQQSYLSRDH*QQSYYL
Trigger: GAGGTAATAACTTTGTTGGCAGTGATCTCTGGAGAG...ATAACTTTGTTGGCAGTGATCTCTGGAGAGGTAAAGTAGGAATTTGGATATGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp GTGGTAGCCTCTTCTTCCCCACCATCTCATCAATTTATACGCATGATCTTATTTAGCACAATTCATAACTaGAAAGATATGGAACCAACC +
Preference number: 4 (lower is better)
Translates to: VVASSSPPSHQFIRMILFSTIHN*KDMEPT
Trigger: GGTTGGTTCCATATCTTTGCAGTTATGAATTGTGCT...AAATAAGATCATGCGTATAAATTGATGAGATGGTGGGGAAGAAGAGGCTACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp TTAAACAGAAACCAGCCCTTTGGAAAGACCTGTTGCACCTCTGATTACAACCAACACAAATGTTACATTTaGATGAGTGGAAGTTCTGAT +
Preference number: 4 (lower is better)
Translates to: LNRNQPFGKTCCTSDYNQHKCYI*MSGSSD
Trigger: ATCAGAACTTCCACTCATGCAAATGTAACATTTGTG...TTGGTTGTAATCAGAGGTGCAACAGGTCTTTCCAAAGGGCTGGTTTCTGTTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp GGACAGTCAAGGACAGCGATGTGTAGGGAAAGTTTGGTTCATGCAAAAATGAATATACTAATTTTCCAATaGATTCACCTATCCATTGGC +
Preference number: 4 (lower is better)
Translates to: GQSRTAMCRESLVHAKMNILIFQ*IHLSIG
Trigger: GCCAATGGATAGGTGAATGCATTGGAAAATTAGTAT...ATTCATTTTTGCATGAACCAAACTTTCCCTACACATCGCTGTCCTTGACTGTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp ACAGTTAAATGGTTAAATGACTACCTACTTCAATGTGCTTTCTGGCAGCCAGAAGACGCTCGGATTTACTaGCTTTTCTTGTATGTTGTT +
Preference number: 4 (lower is better)
Translates to: TVKWLNDYLLQCAFWQPEDARIY*LFLYVV
Trigger: AACAACATACAAGAAAAGGCAGTAAATCCGAGCGTC...TTCTGGCTGCCAGAAAGCACATTGAAGTAGGTAGTCATTTAACCATTTAACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp AGAGGAATTATACAATATCTGTTCTTTTGTGGCTGGCTTATTTCACTCAGCATAAGTGTCGGACTGTGCTaGATTAAGCATTGTACTAGG +
Preference number: 4 (lower is better)
Translates to: RGIIQYLFFCGWLISLSISVGLC*IKHCTR
Trigger: CCTAGTACAATGCTTAATCCAGCACAGTCCGACACT...TATGCTGAGTGAAATAAGCCAGCCACAAAAGAACAGATATTGTATAATTCCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp AGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATGGATGTTAATGTATAGCCAATCAGTGTGCTaGCATATTTGGTGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: STHVGKTVIINWAWMLMYSQSVC*HIWCLW
Trigger: CCACAAACACCAAATATGCCAGCACACTGATTGGCT...ATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp TTAAACAGAAACCAGCCCTTTGGAAAGACCTGTTGCACCTCTGATTACAACCAATCTAGTCAGCATTTTTaGCTTGATAAAACCACAACT +
Preference number: 4 (lower is better)
Translates to: LNRNQPFGKTCCTSDYNQSSQHF*LDKTTT
Trigger: AGTTGTGGTTTTATCAAGCCAAAAATGCTGACTAGA...TTGGTTGTAATCAGAGGTGCAACAGGTCTTTCCAAAGGGCTGGTTTCTGTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp AGAGGAATTATACAATATCTGTTCTTTTGTGGCTGGCTTATTTCACTCAGCATAAGGGAGCTGACGTTTTaGACTCTGGACAGATACAAT +
Preference number: 4 (lower is better)
Translates to: RGIIQYLFFCGWLISLSIRELTF*TLDRYN
Trigger: ATTGTATCTGTCCAGAGTCCAAAACGTCAGCTCCCT...TATGCTGAGTGAAATAAGCCAGCCACAAAAGAACAGATATTGTATAATTCCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp AGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATGGATGTTAATGTATTGGACTAACTCCCCTTaGATCAGTTTTCTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: STHVGKTVIINWAWMLMYWTNSP*ISFLPS
Trigger: TGAGGGAAGAAAACTGATCCAAGGGGAGTTAGTCCA...ATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp AGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATGGATGTTAATGTATCAACAGTTGGAGCCTTaGGAACAAGGAAGTTACACT +
Preference number: 4 (lower is better)
Translates to: STHVGKTVIINWAWMLMYQQLEP*EQGSYT
Trigger: AGTGTAACTTCCTTGTTCCCAAGGCTCCAACTGTTG...ATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GTGGTAGCCTCTTCTTCCCCACCATCTCATCAATTTATACGCATGATCTTATTTTATTTTTCAGAAGCTTaGAGGTCTGAGTACACATGT +
Preference number: 4 (lower is better)
Translates to: VVASSSPPSHQFIRMILFYFSEA*RSEYTC
Trigger: ACATGTGTACTCAGACCTCCAAGCTTCTGAAAAATA...AAATAAGATCATGCGTATAAATTGATGAGATGGTGGGGAAGAAGAGGCTACCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp AGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATGGATGTTAATGTATCAAAGCTGTGGTAGCTaGCTCTTTAACTGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: STHVGKTVIINWAWMLMYQSCGS*LFNWFR
Trigger: TCTGAACCAGTTAAAGAGCCAGCTACCACAGCTTTG...ATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CAA 72 bp ATGTTTGAGCTTACTGTTTACATTATGTTCAGGAGTTaGCCAGCCAGAATAAGAGAACATTCCATTCCAGAG +
Preference number: 4 (lower is better)
Translates to: MFELTVYIMFRS*PARIREHSIPE
Trigger: CTCTGGAATGGAATGTTCTCTTATTCTGGCTGGCAAACTCCTGAACATAATGTAAACAGTAAGCTCAAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CAA 72 bp ATGAGGAGTTACACTGACAGGATAAAATTTCAAGGCTaGCTAATCCTTGTGCATGATGACATGAGATCATCA +
Preference number: 4 (lower is better)
Translates to: MRSYTDRIKFQG*LILVHDDMRSS
Trigger: TGATGATCTCATGTCATCATGCACAAGGATTAGCAAGCCTTGAAATTTTATCCTGTCAGTGTAACTCCTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp TACATATCCAAATTCCTACTTTACCTCTCCAGAGATCACTGCCAACAAAGTTATAGTCATCCCAACAATTaGCTTGGTAAAGCGTATTTC +
Preference number: 4 (lower is better)
Translates to: YISKFLLYLSRDHCQQSYSHPNN*LGKAYF
Trigger: GAAATACGCTTTACCAAGTCAATTGTTGGGATGACT...ATAACTTTGTTGGCAGTGATCTCTGGAGAGGTAAAGTAGGAATTTGGATATGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp AGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATGGATGTTAATGTATCTATCAGTTCAAGGGTaGATATGCCTTCAGAATGCA +
Preference number: 4 (lower is better)
Translates to: STHVGKTVIINWAWMLMYLSVQG*ICLQNA
Trigger: TGCATTCTGAAGGCATATTCACCCTTGAACTGATAG...ATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp ACAGTTAAATGGTTAAATGACTACCTACTTCAATGTGCTTTCTGGCAGCCAGAACTCTGCCCTCATGAGTaGATGAATTTATTTCTAGAT +
Preference number: 4 (lower is better)
Translates to: TVKWLNDYLLQCAFWQPELCPHE*MNLFLD
Trigger: ATCTAGAAATAAATTCATTCACTCATGAGGGCAGAG...TTCTGGCTGCCAGAAAGCACATTGAAGTAGGTAGTCATTTAACCATTTAACTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATCTCATACACATTCATTaGAACCTTCATATCAGTTTC +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDLIHIH*NLHISF
Trigger: GAAACTGATATGAAGGTTGCAATGAATGTGTATGAG...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR GCA 90 bp ACAGTTAAATGGTTAAATGACTACCTACTTCAATGTGCTTTCTGGCAGCCAGAAAAACAGCCTCAACAATaGCAATCAAAGAGCAAAACA +
Preference number: 4 (lower is better)
Translates to: TVKWLNDYLLQCAFWQPEKQPQQ*QSKSKT
Trigger: TGTTTTGCTCTTTGATTGGCATTGTTGAGGCTGTTT...TTCTGGCTGCCAGAAAGCACATTGAAGTAGGTAGTCATTTAACCATTTAACTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATTGCAACCTCGTAAGTTaGTTCCTGTTCTATAATTTA +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDCNLVS*FLFYNL
Trigger: TAAATTATAGAACAGGAAGCAACTTACGAGGTTGCA...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATCTGTTAAGCATGCCTTaGACCAAATTAAAATATGTG +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDLLSMP*TKLKYV
Trigger: CACATATTTTAATTTGGTGCAAGGCATGCTTAACAG...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp TACATATCCAAATTCCTACTTTACCTCTCCAGAGATCACTGCCAACAAAGTTATTTAGAAAGCAGTAACTaGATTTCTGGTAGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: YISKFLLYLSRDHCQQSYLESSN*ISGRPF
Trigger: GAAAGGCCTACCAGAAATGCAGTTACTGCTTTCTAA...ATAACTTTGTTGGCAGTGATCTCTGGAGAGGTAAAGTAGGAATTTGGATATGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp AGAGGAATTATACAATATCTGTTCTTTTGTGGCTGGCTTATTTCACTCAGCATAAAACAAAAAGTGCCTTaGGACCTAGCAATCCAGGTT +
Preference number: 4 (lower is better)
Translates to: RGIIQYLFFCGWLISLSIKQKVP*DLAIQV
Trigger: AACCTGGATTGCTAGGTCCCAAGGCACTTTTTGTTT...TATGCTGAGTGAAATAAGCCAGCCACAAAAGAACAGATATTGTATAATTCCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATCATATCAGTTTCCCTTaGAATGTGATCCTTAAAATC +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDHISFP*NVILKI
Trigger: GATTTTAAGGATCACATTCCAAGGGAAACTGATATG...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CCA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATAGTTTCAAATGCTACTaGATAGAATTTGATCCAGCA +
Preference number: 4 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDSFKCY*IEFDPA
Trigger: TGCTGGATCAAATTCTATCCAGTAGCATTTGAAACT...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CAA 72 bp AATGCCTTTTTGATCTATTGCCAATGCTTTCACCTTTaGTCTATTTATACAAGGGGCTCAGATTCTGCATCT +
Preference number: 4 (lower is better)
Translates to: NAFLIYCQCFHL*SIYTRGSDSAS
Trigger: AGATGCAGAATCTGAGCCCCTTGTATAAATAGACAAAAGGTGAAAGCATTGGCAATAGATCAAAAAGGCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp TACATATCCAAATTCCTACTTTACCTCTCCAGAGATCACTGCCAACAAAGTTATGAAAAACATTATAACTaGGTTCACAGCAGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: YISKFLLYLSRDHCQQSYEKHYN*VHSSLL
Trigger: AAGAAGGCTGCTGTGAACTCAGTTATAATGTTTTTC...ATAACTTTGTTGGCAGTGATCTCTGGAGAGGTAAAGTAGGAATTTGGATATGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp AGAGGAATTATACAATATCTGTTCTTTTGTGGCTGGCTTATTTCACTCAGCATACTTAAAGTAAGATTCTaGGAGTTACACAGGGTAGGA +
Preference number: 4 (lower is better)
Translates to: RGIIQYLFFCGWLISLSILKVRF*ELHRVG
Trigger: TCCTACCCTGTGTAACTCTCAGAATCTTACTTTAAG...TATGCTGAGTGAAATAAGCCAGCCACAAAAGAACAGATATTGTATAATTCCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp AGAGGAATTATACAATATCTGTTCTTTTGTGGCTGGCTTATTTCACTCAGCATAAGAGCTCTGCCCTCATaGGTGAATGAATTTATTTCT +
Preference number: 4 (lower is better)
Translates to: RGIIQYLFFCGWLISLSIRALPS*VNEFIS
Trigger: AGAAATAAATTCATTCACTCATGAGGGCAGAGCTCT...TATGCTGAGTGAAATAAGCCAGCCACAAAAGAACAGATATTGTATAATTCCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp TACATATCCAAATTCCTACTTTACCTCTCCAGAGATCACTGCCAACAAAGTTATCATCTGAAAGAGACTTaGTATGGGGTACAAATTCTT +
Preference number: 4 (lower is better)
Translates to: YISKFLLYLSRDHCQQSYHLKET*YGVQIL
Trigger: AAGAATTTGTACCCCATAGCAAGTCTCTTTCAGATG...ATAACTTTGTTGGCAGTGATCTCTGGAGAGGTAAAGTAGGAATTTGGATATGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp AGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATGGATGTTAATGTATCATTGCAGGAAAATATaGTATATGGCCATTGCTGAC +
Preference number: 4 (lower is better)
Translates to: STHVGKTVIINWAWMLMYHCRKI*YMAIAD
Trigger: GTCAGCAATGGCCATATAGCATATTTTCCTGCAATG...ATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp AGAGGAATTATACAATATCTGTTCTTTTGTGGCTGGCTTATTTCACTCAGCATAGAAACAATGTCTTTTTaGAGCAACTATGATGGAGCC +
Preference number: 4 (lower is better)
Translates to: RGIIQYLFFCGWLISLSIETMSF*SNYDGA
Trigger: GGCTCCATCATAGTTGCTGCAAAAAGACATTGTTTC...TATGCTGAGTGAAATAAGCCAGCCACAAAAGAACAGATATTGTATAATTCCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp AGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATGGATGTTAATGTATTCTTTGAGGACACTCTaGATTTTAGAAGTGCCACAA +
Preference number: 4 (lower is better)
Translates to: STHVGKTVIINWAWMLMYSLRTL*ILEVPQ
Trigger: TTGTGGCACTTCTAAAATGCAGAGTGTCCTCAAAGA...ATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR GCA 90 bp ACAGTTAAATGGTTAAATGACTACCTACTTCAATGTGCTTTCTGGCAGCCAGAAGCAATGAGATACAAGTaGCATCTTTTAGCACATTAT +
Preference number: 4 (lower is better)
Translates to: TVKWLNDYLLQCAFWQPEAMRYK*HLLAHY
Trigger: ATAATGTGCTAAAAGATGGCACTTGTATCTCATTGC...TTCTGGCTGCCAGAAAGCACATTGAAGTAGGTAGTCATTTAACCATTTAACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp AGAGGAATTATACAATATCTGTTCTTTTGTGGCTGGCTTATTTCACTCAGCATAGAAAGAGACTTGCTATaGGGTACAAATTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: RGIIQYLFFCGWLISLSIERDLL*GTNSSI
Trigger: GATGGAAGAATTTGTACCCCATAGCAAGTCTCTTTC...TATGCTGAGTGAAATAAGCCAGCCACAAAAGAACAGATATTGTATAATTCCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp AGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATGGATGTTAATGTATATAACTGCAAAGATATaGAACCAACCTAAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: STHVGKTVIINWAWMLMYITAKI*NQPKCP
Trigger: TGGGCACTTAGGTTGGTTCCATATCTTTGCAGTTAT...ATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp AGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATGGATGTTAATGTATAAACATCAAGAACACTaGCTTATCAGCAACCTTCAG +
Preference number: 4 (lower is better)
Translates to: STHVGKTVIINWAWMLMYKHQEH*LISNLQ
Trigger: CTGAAGGTTGCTGATAAGCCAGTGTTCTTGATGTTT...ATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp AGAGGAATTATACAATATCTGTTCTTTTGTGGCTGGCTTATTTCACTCAGCATACTGTTCTTTTGTGGCTaGCTTATTTCACTCAGCATA +
Preference number: 4 (lower is better)
Translates to: RGIIQYLFFCGWLISLSILFFCG*LISLSI
Trigger: TATGCTGAGTGAAATAAGCCAGCCACAAAAGAACAG...TATGCTGAGTGAAATAAGCCAGCCACAAAAGAACAGATATTGTATAATTCCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR TCA 90 bp AGAGGAATTATACAATATCTGTTCTTTTGTGGCTGGCTTATTTCACTCAGCATAAAGCTTATGTCCAGCTaGGTAGTTATATCAATCACA +
Preference number: 4 (lower is better)
Translates to: RGIIQYLFFCGWLISLSIKLMSS*VVISIT
Trigger: TGTGATTGATATAACTACTCAGCTGGACATAAGCTT...TATGCTGAGTGAAATAAGCCAGCCACAAAAGAACAGATATTGTATAATTCCTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp AGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATGGATGTTAATGTATTTAGCCATTGGCATTTaGTCAGTATGTGTATGTAGT +
Preference number: 4 (lower is better)
Translates to: STHVGKTVIINWAWMLMYLAIGI*SVCVCS
Trigger: ACTACATACACATACTGACCAAATGCCAATGGCTAA...ATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
3UTR CAA 72 bp GGCAGAATTAATCCATCAATCACATTTAGAGAGCTCTaGGCACGAACTTTAATATTAGACCAAGTGTTGTAT +
Preference number: 4 (lower is better)
Translates to: GRINPSITFREL*ARTLILDQVLY
Trigger: ATACAACACTTGGTCTAATATTAAAGTTCGTGCCAAGAGCTCTCTAAATGTGATTGATGGATTAATTCTGCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CCA 90 bp AGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATGGATGTTAATGTATAAATTCTGTCACATTTaGTGTTCAGACACGTATAAC +
Preference number: 4 (lower is better)
Translates to: STHVGKTVIINWAWMLMYKFCHI*CSDTYN
Trigger: GTTATACGTGTCTGAACACCAAATGTGACAGAATTT...ATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS CCA 90 bp TCCTCCCCTCCCGCCCGCGACCTCCGCCTTAGGAGAGCGCGCCCATaGCCCTCGCGCCCCAATCCCGCGCCGGCGACAGAGCGAGCCGCG +
Preference number: 5 (lower is better)
Translates to: SSPPARDLRLRRARP*PSRPNPAPATERAA
Trigger: CGCGGCTCGCTCTGTCGCCGGCGCGGGATTGGGGCGCGAGGGCCATGGGCGCGCTCTCCTAAGGCGGAGGTCGCGGGCGGGAGGGGAGGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS GCA 90 bp TCTGCTGACTGGGCTGCAGCACTGAGCGCGACATGGTGGTGCTGGTaGCGCCGCCGCCGCCGGCCGCCTCGCGCCCAGTCACGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: SADWAAALSATWWCW*RRRRRPPRAQSRAR
Trigger: GCGGGCCCGTGACTGGGCGCGAGGCGGCCGGCGGCGGCGGCGGCACCAGCACCACCATGTCGCGCTCAGTGCTGCAGCCCAGTCAGCAGA
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS CCA 90 bp GCTTCTGCTGACTGGGCTGCAGCACTGAGCGCGACATGGTGGTGCTaGTGCCGCCGCCGCCGCCGGCCGCCTCGCGCCCAGTCACGGGCC +
Preference number: 5 (lower is better)
Translates to: ASADWAAALSATWWC*CRRRRRPPRAQSRA
Trigger: GGCCCGTGACTGGGCGCGAGGCGGCCGGCGGCGGCGGCGGCACCAGCACCACCATGTCGCGCTCAGTGCTGCAGCCCAGTCAGCAGAAGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS GCA 90 bp CCAGCTTCTGCTGACTGGGCTGCAGCACTGAGCGCGACATGGTGGTaGTGGTGCCGCCGCCGCCGCCGGCCGCCTCGCGCCCAGTCACGG +
Preference number: 5 (lower is better)
Translates to: PASADWAAALSATWW*WCRRRRRPPRAQSR
Trigger: CCGTGACTGGGCGCGAGGCGGCCGGCGGCGGCGGCGGCACCAGCACCACCATGTCGCGCTCAGTGCTGCAGCCCAGTCAGCAGAAGCTGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS CCA 90 bp CCGCCAGCTTCTGCTGACTGGGCTGCAGCACTGAGCGCGACATGGTaGTGCTGGTGCCGCCGCCGCCGCCGGCCGCCTCGCGCCCAGTCA +
Preference number: 5 (lower is better)
Translates to: PPASADWAAALSATW*CWCRRRRRPPRAQS
Trigger: TGACTGGGCGCGAGGCGGCCGGCGGCGGCGGCGGCACCAGCACCACCATGTCGCGCTCAGTGCTGCAGCCCAGTCAGCAGAAGCTGGCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS CCA 90 bp TCTCCGCCAGCTTCTGCTGACTGGGCTGCAGCACTGAGCGCGACATaGTGGTGCTGGTGCCGCCGCCGCCGCCGGCCGCCTCGCGCCCAG +
Preference number: 5 (lower is better)
Translates to: SPPASADWAAALSAT*WCWCRRRRRPPRAQ
Trigger: CTGGGCGCGAGGCGGCCGGCGGCGGCGGCGGCACCAGCACCACCATGTCGCGCTCAGTGCTGCAGCCCAGTCAGCAGAAGCTGGCGGAGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS TCA 90 bp GATGGTGAGCTTCTCCGCCAGCTTCTGCTGACTGGGCTGCAGCACTaGGCGCGACATGGTGGTGCTGGTGCCGCCGCCGCCGCCGGCCGC +
Preference number: 5 (lower is better)
Translates to: DGELLRQLLLTGLQH*ARHGGAGAAAAAGR
Trigger: GCGGCCGGCGGCGGCGGCGGCACCAGCACCACCATGTCGCGCTCAGTGCTGCAGCCCAGTCAGCAGAAGCTGGCGGAGAAGCTCACCATC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS CCA 90 bp GGCCCTGGCCCTGGCCCGGACCGCCCACTACGCCTGATGCCGGGATaGGAGTCCCAAGCGGGGACTGAGTGGGGTCGCGTTGTGTGCTCT +
Preference number: 5 (lower is better)
Translates to: GPGPGPDRPLRLMPG*ESQAGTEWGRVVCS
Trigger: AGAGCACACAACGCGACCCCACTCAGTCCCCGCTTGGGACTCCCATCCCGGCATCAGGCGTAGTGGGCGGTCCGGGCCAGGGCCAGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360982.2
CDS TCA 90 bp ACGCCCCGGTCGTTGAGGATGGTGAGCTTCTCCGCCAGCTTCTGCTaGCTGGGCTGCAGCACTGAGCGCGACATGGTGGTGCTGGTGCCG +
Preference number: 5 (lower is better)
Translates to: TPRSLRMVSFSASFC*LGCSTERDMVVLVP
Trigger: CGGCACCAGCACCACCATGTCGCGCTCAGTGCTGCAGCCCAGTCAGCAGAAGCTGGCGGAGAAGCTCACCATCCTCAACGACCGGGGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CAA 90 bp CCTGGGTGTCCCCCTAGGGCTACAGCTGCTCTCAAGGTCACTTCCTCTCACACAATGTGCCCACAACAGTaGGAGCCTTGGGAACAAGGA +
Preference number: 5 (lower is better)
Translates to: PGCPPRATAALKVTSSHTMCPQQ*EPWEQG
Trigger: TCCTTGTTCCCAAGGCTCCAACTGTTGTGGGCACAT...TGTGTGAGAGGAAGTGACCTTGAGAGCAGCTGTAGCCCTAGGGGGACACCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp GTTTGTGGAGGGTCTGCTTTCTGGTTCATGAACAGTGGCTTCTTGCTTTGTCCTCCGACGCCCCGGTCGTaGAGGATGGTGAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: VCGGSAFWFMNSGFLLCPPTPRS*RMVSFS
Trigger: GGAGAAGCTCACCATCCTCAACGACCGGGGCGTCGG...AGGACAAAGCAAGAAGCCACTGTTCATGAACCAGAAAGCAGACCCTCCACAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp CCTGGGTGTCCCCCTAGGGCTACAGCTGCTCTCAAGGTCACTTCCTCTCACACAATGAACAGTGGCTTCTaGCTTTGTCCTCACGTGGTG +
Preference number: 5 (lower is better)
Translates to: PGCPPRATAALKVTSSHTMNSGF*LCPHVV
Trigger: CACCACGTGAGGACAAAGCAAGAAGCCACTGTTCAT...TGTGTGAGAGGAAGTGACCTTGAGAGCAGCTGTAGCCCTAGGGGGACACCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp GAGGCTGTGGCATCATACTTCAAGTCATATCCACGTCCAAAATCCTACCAGGAATCCTCCAAGTTACCTTaGCCACGCCTCCTCCCCCGC +
Preference number: 5 (lower is better)
Translates to: EAVASYFKSYPRPKSYQESSKLP*PRLLPR
Trigger: GCGGGGGAGGAGGCGTGGCAAAGGTAACTTGGAGGA...TTCCTGGTAGGATTTTGGACGTGGATATGACTTGAAGTATGATGCCACAGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp ATACAAGGGGCTCAGATTCTGCATCTTCTCCCCCTGACATCCCAGACAAGTGATGCCGAGATCAGGCCATaGCCCATTTCCTGGGCAACA +
Preference number: 5 (lower is better)
Translates to: IQGAQILHLLPLTSQTSDAEIRP*PISWAT
Trigger: TGTTGCCCAGGAAATGGGCAATGGCCTGATCTCGGC...ATCACTTGTCTGGGATGTCAGGGGGAGAAGATGCAGAATCTGAGCCCCTTGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp ACAGTGAGCCGAGATCAGGCCATTGCCCATTTCCTGGGCAACAAGAGTGAAACTTTCATTTCCCTCTCCTaGCCAGCCCCTGCCAACCAA +
Preference number: 5 (lower is better)
Translates to: TVSRDQAIAHFLGNKSETFISLS*PAPANQ
Trigger: TTGGTTGGCAGGGGCTGGCAAGGAGAGGGAAATGAA...AGTTTCACTCTTGTTGCCCAGGAAATGGGCAATGGCCTGATCTCGGCTCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp CCTGGGTGTCCCCCTAGGGCTACAGCTGCTCTCAAGGTCACTTCCTCTCACACACAAACAGAACCGCTTTaGGAGAAACTTGCCCTTATA +
Preference number: 5 (lower is better)
Translates to: PGCPPRATAALKVTSSHTQTEPL*EKLALI
Trigger: TATAAGGGCAAGTTTCTCCAAAAGCGGTTCTGTTTG...TGTGTGAGAGGAAGTGACCTTGAGAGCAGCTGTAGCCCTAGGGGGACACCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATCCGACGCCCCGGTCGTaGAGGATGGTGAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDPTPRS*RMVSFS
Trigger: GGAGAAGCTCACCATCCTCAACGACCGGGGCGTCGG...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CAA 90 bp TCAGTTTGGCTCTCTCTGGTGAATCCCACCCCCACACCATGTGATGCTCTGTGTATGATATTCCTTCACTaGCCAGCAACCCTTGGACCT +
Preference number: 5 (lower is better)
Translates to: SVWLSLVNPTPTPCDALCMIFLH*PATLGP
Trigger: AGGTCCAAGGGTTGCTGGCAAGTGAAGGAATATCAT...ACACAGAGCATCACATGGTGTGGGGGTGGGATTCACCAGAGAGAGCCAAACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp CCTGGGTGTCCCCCTAGGGCTACAGCTGCTCTCAAGGTCACTTCCTCTCACACATGCTTTTCAAAAACGTaGTATGGTTCACAGCTGAAG +
Preference number: 5 (lower is better)
Translates to: PGCPPRATAALKVTSSHTCFSKT*YGSQLK
Trigger: CTTCAGCTGTGAACCATACAACGTTTTTGAAAAGCA...TGTGTGAGAGGAAGTGACCTTGAGAGCAGCTGTAGCCCTAGGGGGACACCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp CCTGGGTGTCCCCCTAGGGCTACAGCTGCTCTCAAGGTCACTTCCTCTCACACAACCACAGTTCTGTTTTaGCCAGTGCCAAAAAGATTT +
Preference number: 5 (lower is better)
Translates to: PGCPPRATAALKVTSSHTTTVLF*PVPKRF
Trigger: AAATCTTTTTGGCACTGGCAAAAACAGAACTGTGGT...TGTGTGAGAGGAAGTGACCTTGAGAGCAGCTGTAGCCCTAGGGGGACACCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp TCAGTTTGGCTCTCTCTGGTGAATCCCACCCCCACACCATGTGATGCTCTGTGTGAAAGCCAGCATGATTaGTGTTTCTGCATCCAGGCA +
Preference number: 5 (lower is better)
Translates to: SVWLSLVNPTPTPCDALCESQHD*CFCIQA
Trigger: TGCCTGGATGCAGAAACACAAATCATGCTGGCTTTC...ACACAGAGCATCACATGGTGTGGGGGTGGGATTCACCAGAGAGAGCCAAACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp GAGGCTGTGGCATCATACTTCAAGTCATATCCACGTCCAAAATCCTACCAGGAAGTCACCATCAGAAGTTaGCTCATGGCTGGGCGTGGT +
Preference number: 5 (lower is better)
Translates to: EAVASYFKSYPRPKSYQEVTIRS*LMAGRG
Trigger: ACCACGCCCAGCCATGAGCAAACTTCTGATGGTGAC...TTCCTGGTAGGATTTTGGACGTGGATATGACTTGAAGTATGATGCCACAGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp TCAGTTTGGCTCTCTCTGGTGAATCCCACCCCCACACCATGTGATGCTCTGTGTGATCATCAGACCAGCTaGACTATAGGAGGCATTTCT +
Preference number: 5 (lower is better)
Translates to: SVWLSLVNPTPTPCDALCDHQTS*TIGGIS
Trigger: AGAAATGCCTCCTATAGTCAAGCTGGTCTGATGATC...ACACAGAGCATCACATGGTGTGGGGGTGGGATTCACCAGAGAGAGCCAAACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp TCAGTTTGGCTCTCTCTGGTGAATCCCACCCCCACACCATGTGATGCTCTGTGTAGATTTCGAGCTTGTTaGGCCATTTCATCTAGGAAC +
Preference number: 5 (lower is better)
Translates to: SVWLSLVNPTPTPCDALCRFRAC*AISSRN
Trigger: GTTCCTAGATGAAATGGCCAAACAAGCTCGAAATCT...ACACAGAGCATCACATGGTGTGGGGGTGGGATTCACCAGAGAGAGCCAAACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp ATACAAGGGGCTCAGATTCTGCATCTTCTCCCCCTGACATCCCAGACAAGTGATTTGCCTTCTGGGTCTTaGCCTTTATTATTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: IQGAQILHLLPLTSQTSDLPSGS*PLLFLP
Trigger: GGGGAGGAATAATAAAGGCAAAGACCCAGAAGGCAA...ATCACTTGTCTGGGATGTCAGGGGGAGAAGATGCAGAATCTGAGCCCCTTGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp GAGGCTGTGGCATCATACTTCAAGTCATATCCACGTCCAAAATCCTACCAGGAAGCTCCTAGAGGGAACTaGAGCACTCCTCATGACAGA +
Preference number: 5 (lower is better)
Translates to: EAVASYFKSYPRPKSYQEAPRGN*STPHDR
Trigger: TCTGTCATGAGGAGTGCTCAAGTTCCCTCTAGGAGC...TTCCTGGTAGGATTTTGGACGTGGATATGACTTGAAGTATGATGCCACAGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp ACCACTGTGCCTGGCCACCAGTACTTCTTACGTAATACTTGCTGTAGAGAATCTTGGGGTTTAGACATATaGCCCAGGCTGCTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: TTVPGHQYFLRNTCCRESWGLDI*PRLLSN
Trigger: GTTCGAGAGCAGCCTGGGCAATATGTCTAAACCCCA...AGATTCTCTACAGCAAGTATTACGTAAGAAGTACTGGTGGCCAGGCACAGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp TCAGTTTGGCTCTCTCTGGTGAATCCCACCCCCACACCATGTGATGCTCTGTGTGTTATAAAAGTCAGTTaGGCTCTCTCTGGTGAATCC +
Preference number: 5 (lower is better)
Translates to: SVWLSLVNPTPTPCDALCVIKVS*ALSGES
Trigger: GGATTCACCAGAGAGAGCCAAACTGACTTTTATAAC...ACACAGAGCATCACATGGTGTGGGGGTGGGATTCACCAGAGAGAGCCAAACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp ATACAAGGGGCTCAGATTCTGCATCTTCTCCCCCTGACATCCCAGACAAGTGATCTCCCTTTTTGCTCTTaGACAACTGACCAGCATTCC +
Preference number: 5 (lower is better)
Translates to: IQGAQILHLLPLTSQTSDLPFCS*TTDQHS
Trigger: GGAATGCTGGTCAGTTGTCAAAGAGCAAAAAGGGAG...ATCACTTGTCTGGGATGTCAGGGGGAGAAGATGCAGAATCTGAGCCCCTTGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATGCTGTGGGACAACCCTaGCCACCCCACTCAAGCTAC +
Preference number: 5 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDAVGQP*PPHSSY
Trigger: GTAGCTTGAGTGGGGTGGCAAGGGTTGTCCCACAGC...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp TCAGTTTGGCTCTCTCTGGTGAATCCCACCCCCACACCATGTGATGCTCTGTGTAAGCAATGTATGTTGTaGCAATGCCCTTCTATAGCA +
Preference number: 5 (lower is better)
Translates to: SVWLSLVNPTPTPCDALCKQCML*QCPSIA
Trigger: TGCTATAGAAGGGCATTGCAACAACATACATTGCTT...ACACAGAGCATCACATGGTGTGGGGGTGGGATTCACCAGAGAGAGCCAAACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp TCAGTTTGGCTCTCTCTGGTGAATCCCACCCCCACACCATGTGATGCTCTGTGTGCTGCTCTTAGAATTTaGGGAAATGATCTGCTTCTA +
Preference number: 5 (lower is better)
Translates to: SVWLSLVNPTPTPCDALCAALRI*GNDLLL
Trigger: TAGAAGCAGATCATTTCCCAAAATTCTAAGAGCAGC...ACACAGAGCATCACATGGTGTGGGGGTGGGATTCACCAGAGAGAGCCAAACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp GTTTGTGGAGGGTCTGCTTTCTGGTTCATGAACAGTGGCTTCTTGCTTTGTCCTAGACTGCAAAGACCCTaGTACCTTTTGGCTGAAGGT +
Preference number: 5 (lower is better)
Translates to: VCGGSAFWFMNSGFLLCPRLQRP*YLLAEG
Trigger: ACCTTCAGCCAAAAGGTACAAGGGTCTTTGCAGTCT...AGGACAAAGCAAGAAGCCACTGTTCATGAACCAGAAAGCAGACCCTCCACAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp TCAGTTTGGCTCTCTCTGGTGAATCCCACCCCCACACCATGTGATGCTCTGTGTACGTGGAATGCCTTTTaGATCTATTGCCAATGCTTT +
Preference number: 5 (lower is better)
Translates to: SVWLSLVNPTPTPCDALCTWNAF*IYCQCF
Trigger: AAAGCATTGGCAATAGATCAAAAAGGCATTCCACGT...ACACAGAGCATCACATGGTGTGGGGGTGGGATTCACCAGAGAGAGCCAAACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp TCAGTTTGGCTCTCTCTGGTGAATCCCACCCCCACACCATGTGATGCTCTGTGTAATGATTTTTCCTCTTaGTTCTTGTGGAGGGATGCT +
Preference number: 5 (lower is better)
Translates to: SVWLSLVNPTPTPCDALCNDFSS*FLWRDA
Trigger: AGCATCCCTCCACAAGAACAAAGAGGAAAAATCATT...ACACAGAGCATCACATGGTGTGGGGGTGGGATTCACCAGAGAGAGCCAAACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp ACAGTTAAATGGTTAAATGACTACCTACTTCAATGTGCTTTCTGGCAGCCAGAACCCAGTGCAGCAGTGTaGAGAGGTGGGACTTCTGGG +
Preference number: 5 (lower is better)
Translates to: TVKWLNDYLLQCAFWQPEPSAAV*RGGTSG
Trigger: CCCAGAAGTCCCACCTCTCAACACTGCTGCACTGGG...TTCTGGCTGCCAGAAAGCACATTGAAGTAGGTAGTCATTTAACCATTTAACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp GAGGCTGTGGCATCATACTTCAAGTCATATCCACGTCCAAAATCCTACCAGGAATCTTCACTCCTCATCTaGAGGGGTAAGTGGGCAAAC +
Preference number: 5 (lower is better)
Translates to: EAVASYFKSYPRPKSYQESSLLI*RGKWAN
Trigger: GTTTGCCCACTTACCCCTCAAGATGAGGAGTGAAGA...TTCCTGGTAGGATTTTGGACGTGGATATGACTTGAAGTATGATGCCACAGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATCTGAGTGGGGTCGCGTaGTGTGCTCTTTCCACTTCG +
Preference number: 5 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDLSGVA*CALSTS
Trigger: CGAAGTGGAAAGAGCACACAACGCGACCCCACTCAG...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360982.2
CDS-3UTR CAA 90 bp TACATATCCAAATTCCTACTTTACCTCTCCAGAGATCACTGCCAACAAAGTTATGCTGAGATGGGAGAATaGCTTGAACCCGGGAGGCGG +
Preference number: 5 (lower is better)
Translates to: YISKFLLYLSRDHCQQSYAEMGE*LEPGRR
Trigger: CCGCCTCCCGGGTTCAAGCAATTCTCCCATCTCAGC...ATAACTTTGTTGGCAGTGATCTCTGGAGAGGTAAAGTAGGAATTTGGATATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp GTGGTAGCCTCTTCTTCCCCACCATCTCATCAATTTATACGCATGATCTTATTTACTTGCCAGCAACCCTaGGACCTCTGCAAGGATGTG +
Preference number: 5 (lower is better)
Translates to: VVASSSPPSHQFIRMILFTCQQP*DLCKDV
Trigger: CACATCCTTGCAGAGGTCCAAGGGTTGCTGGCAAGT...AAATAAGATCATGCGTATAAATTGATGAGATGGTGGGGAAGAAGAGGCTACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp ATACAAGGGGCTCAGATTCTGCATCTTCTCCCCCTGACATCCCAGACAAGTGATGCATTCACCTATCCATaGGCCATGGTTACTATCATT +
Preference number: 5 (lower is better)
Translates to: IQGAQILHLLPLTSQTSDAFTYP*AMVTII
Trigger: AATGATAGTAACCATGGCCAATGGATAGGTGAATGC...ATCACTTGTCTGGGATGTCAGGGGGAGAAGATGCAGAATCTGAGCCCCTTGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp TTAAACAGAAACCAGCCCTTTGGAAAGACCTGTTGCACCTCTGATTACAACCAATCAGACTCTACTATCTaGGAGGACTGCAGGTGCCCT +
Preference number: 5 (lower is better)
Translates to: LNRNQPFGKTCCTSDYNQSDSTI*EDCRCP
Trigger: AGGGCACCTGCAGTCCTCCAAGATAGTAGAGTCTGA...TTGGTTGTAATCAGAGGTGCAACAGGTCTTTCCAAAGGGCTGGTTTCTGTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS CCA 90 bp GCTGGATTAAGCATTGTACTAGGTGCACTGATGAGGCTCAATAACTaGGCATTTCTCCACTGGTCAGCTGAAAGATTCCTTCGAGGATAT +
Preference number: 5 (lower is better)
Translates to: AGLSIVLGALMRLNN*AFLHWSAERFLRGY
Trigger: ATATCCTCGAAGGAATCTTTCAGCTGACCAGTGGAGAAATGCCCAGTTATTGAGCCTCATCAGTGCACCTAGTACAATGCTTAATCCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS CCA 90 bp TTCTATAGCAGGGCTGTACTGAGACATCACATTACTGGCCAGTGTTaGCAAAGAAACTGCCACAAACACCATGAGAAGGCAGGCAATTTT +
Preference number: 5 (lower is better)
Translates to: FYSRAVLRHHITGQC*QRNCHKHHEKAGNF
Trigger: AAAATTGCCTGCCTTCTCATGGTGTTTGTGGCAGTTTCTTTGCCAACACTGGCCAGTAATGTGATGTCTCAGTACAGCCCTGCTATAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360982.2
ENST00000361354.9
ENST00000478449.5
CDS-3UTR CAA 90 bp GAGGCTGTGGCATCATACTTCAAGTCATATCCACGTCCAAAATCCTACCAGGAAATCTGGTTGATGGCTTaGGCCAAGCAATGTATGTTG +
Preference number: 5 (lower is better)
Translates to: EAVASYFKSYPRPKSYQEIWLMA*AKQCML
Trigger: CAACATACATTGCTTGGCCAAAGCCATCAACCAGAT...TTCCTGGTAGGATTTTGGACGTGGATATGACTTGAAGTATGATGCCACAGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATGCTGCAGCAATCTGGTaGATGGCTTTGGCCAAGCAA +
Preference number: 5 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDAAAIW*MALAKQ
Trigger: TTGCTTGGCCAAAGCCATCAACCAGATTGCTGCAGC...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CAA 90 bp GTGGTAGCCTCTTCTTCCCCACCATCTCATCAATTTATACGCATGATCTTATTTGCTGCAGCAATCTGGTaGATGGCTTTGGCCAAGCAA +
Preference number: 5 (lower is better)
Translates to: VVASSSPPSHQFIRMILFAAAIW*MALAKQ
Trigger: TTGCTTGGCCAAAGCCATCAACCAGATTGCTGCAGC...AAATAAGATCATGCGTATAAATTGATGAGATGGTGGGGAAGAAGAGGCTACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp ATACAAGGGGCTCAGATTCTGCATCTTCTCCCCCTGACATCCCAGACAAGTGATGTCAGCATTTTTGGCTaGATAAAACCACAACTACCA +
Preference number: 5 (lower is better)
Translates to: IQGAQILHLLPLTSQTSDVSIFG*IKPQLP
Trigger: TGGTAGTTGTGGTTTTATCAAGCCAAAAATGCTGAC...ATCACTTGTCTGGGATGTCAGGGGGAGAAGATGCAGAATCTGAGCCCCTTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp ATACAAGGGGCTCAGATTCTGCATCTTCTCCCCCTGACATCCCAGACAAGTGATCAATGCTTTCACCTTTaGTCTATTTATACAAGGGGC +
Preference number: 5 (lower is better)
Translates to: IQGAQILHLLPLTSQTSDQCFHL*SIYTRG
Trigger: GCCCCTTGTATAAATAGACAAAAGGTGAAAGCATTG...ATCACTTGTCTGGGATGTCAGGGGGAGAAGATGCAGAATCTGAGCCCCTTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp TTAAACAGAAACCAGCCCTTTGGAAAGACCTGTTGCACCTCTGATTACAACCAAGTGCTCAGAGGAGCATaGACTACCTTTTCCATCCCT +
Preference number: 5 (lower is better)
Translates to: LNRNQPFGKTCCTSDYNQVLRGA*TTFSIP
Trigger: AGGGATGGAAAAGGTAGTCAATGCTCCTCTGAGCAC...TTGGTTGTAATCAGAGGTGCAACAGGTCTTTCCAAAGGGCTGGTTTCTGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp CCACTGACCAATGAGTGGACAAAGAAAGTGTGGTATATATACACACCACGGAATCACTGCAGAGTTCCATaGGTAGAGATGCGCTTTGTG +
Preference number: 5 (lower is better)
Translates to: PLTNEWTKKVWYIYTPRNHCRVP*VEMRFV
Trigger: CACAAAGCGCATCTCTACCAATGGAACTCTGCAGTG...ATTCCGTGGTGTGTATATATACCACACTTTCTTTGTCCACTCATTGGTCAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp ACAGTGAGCCGAGATCAGGCCATTGCCCATTTCCTGGGCAACAAGAGTGAAACTATTACTCCTTCGTCATaGAAACTAATACACGCTCTA +
Preference number: 5 (lower is better)
Translates to: TVSRDQAIAHFLGNKSETITPSS*KLIHAL
Trigger: TAGAGCGTGTATTAGTTTCAATGACGAAGGAGTAAT...AGTTTCACTCTTGTTGCCCAGGAAATGGGCAATGGCCTGATCTCGGCTCACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp GGACAGTCAAGGACAGCGATGTGTAGGGAAAGTTTGGTTCATGCAAAAATGAATGAAGTTAGTCCATGTTaGGTGGAAAGGGGTCCTCAG +
Preference number: 5 (lower is better)
Translates to: GQSRTAMCRESLVHAKMNEVSPC*VERGPQ
Trigger: CTGAGGACCCCTTTCCACCAAACATGGACTAACTTC...ATTCATTTTTGCATGAACCAAACTTTCCCTACACATCGCTGTCCTTGACTGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS GCA 90 bp GCTGTACTGAGACATCACATTACTGGCCAGTGTTGGCAAAGAAACTaGCACAAACACCATGAGAAGGCAGGCAATTTTATACTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: AVLRHHITGQCWQRN*HKHHEKAGNFILFF
Trigger: GAAGAAGAGTATAAAATTGCCTGCCTTCTCATGGTGTTTGTGGCAGTTTCTTTGCCAACACTGGCCAGTAATGTGATGTCTCAGTACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360982.2
ENST00000361354.9
ENST00000478449.5
CDS-3UTR CAA 90 bp GAGGCTGTGGCATCATACTTCAAGTCATATCCACGTCCAAAATCCTACCAGGAAGGTATTCTCTGTCACTaGCTCCATGAGTCATTTCAT +
Preference number: 5 (lower is better)
Translates to: EAVASYFKSYPRPKSYQEGILCH*LHESFH
Trigger: ATGAAATGACTCATGGAGCAAGTGACAGAGAATACC...TTCCTGGTAGGATTTTGGACGTGGATATGACTTGAAGTATGATGCCACAGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATGTCTTTCTCTGTGCATaGAACCAGCATGTGACACGG +
Preference number: 5 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDVFLCA*NQHVTR
Trigger: CCGTGTCACATGCTGGTTCAATGCACAGAGAAAGAC...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CAA 90 bp CCACTGACCAATGAGTGGACAAAGAAAGTGTGGTATATATACACACCACGGAATACCCATTTACCAAGTTaGTGGCCCTCATGTAAGAGG +
Preference number: 5 (lower is better)
Translates to: PLTNEWTKKVWYIYTPRNTHLPS*WPSCKR
Trigger: CCTCTTACATGAGGGCCACAAACTTGGTAAATGGGT...ATTCCGTGGTGTGTATATATACCACACTTTCTTTGTCCACTCATTGGTCAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp TTAAACAGAAACCAGCCCTTTGGAAAGACCTGTTGCACCTCTGATTACAACCAATGGCATATTTGGTGTTaGTGGAGGGTCTGCTTTCTG +
Preference number: 5 (lower is better)
Translates to: LNRNQPFGKTCCTSDYNQWHIWC*WRVCFL
Trigger: CAGAAAGCAGACCCTCCACAAACACCAAATATGCCA...TTGGTTGTAATCAGAGGTGCAACAGGTCTTTCCAAAGGGCTGGTTTCTGTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp AGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATGGATGTTAATGTATTATCGAGACCGGCTCTaGCTCTGTCACCTAGGCTGG +
Preference number: 5 (lower is better)
Translates to: STHVGKTVIINWAWMLMYYRDRL*LCHLGW
Trigger: CCAGCCTAGGTGACAGAGCAAGAGCCGGTCTCGATA...ATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp GAGGCTGTGGCATCATACTTCAAGTCATATCCACGTCCAAAATCCTACCAGGAACTGCACAGGGCCCTTTaGATTGCAAGAAATATAATC +
Preference number: 5 (lower is better)
Translates to: EAVASYFKSYPRPKSYQELHRAL*IARNII
Trigger: GATTATATTTCTTGCAATCAAAAGGGCCCTGTGCAG...TTCCTGGTAGGATTTTGGACGTGGATATGACTTGAAGTATGATGCCACAGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp ATACAAGGGGCTCAGATTCTGCATCTTCTCCCCCTGACATCCCAGACAAGTGATTTTTTGATTCATTTGTaGATGGACGCTCGGATTTAC +
Preference number: 5 (lower is better)
Translates to: IQGAQILHLLPLTSQTSDFLIHL*MDARIY
Trigger: GTAAATCCGAGCGTCCATCAACAAATGAATCAAAAA...ATCACTTGTCTGGGATGTCAGGGGGAGAAGATGCAGAATCTGAGCCCCTTGTAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS TCA 90 bp ATGTGGAAAACTTCATCCCGAAAGAGAGAGAGGCAAGAGCTACTTTaGAGAGCTAGTTTCCAAAGGTTCAGTGCTGTAGCGTCAGTATTT +
Preference number: 5 (lower is better)
Translates to: MWKTSSRKRERQELL*RASFQRFSAVASVF
Trigger: AAATACTGACGCTACAGCACTGAACCTTTGGAAACTAGCTCTTCAAAGTAGCTCTTGCCTCTCTCTCTTTCGGGATGAAGTTTTCCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CAA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATGACACGGCTGCCTCCTaGCATTCTCTTATGTCATTA +
Preference number: 5 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDDTAAS*HSLMSL
Trigger: TAATGACATAAGAGAATGCAAGGAGGCAGCCGTGTC...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CAA 90 bp ACCACTGTGCCTGGCCACCAGTACTTCTTACGTAATACTTGCTGTAGAGAATCTGCAGATCTTAAAAACTaGCGTCTTTCTCTGTGCATT +
Preference number: 5 (lower is better)
Translates to: TTVPGHQYFLRNTCCRESADLKN*RLSLCI
Trigger: AATGCACAGAGAAAGACGCAAGTTTTTAAGATCTGC...AGATTCTCTACAGCAAGTATTACGTAAGAAGTACTGGTGGCCAGGCACAGTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATCATTACTGGCCAGTGTaGGCAAAGAAACTGCCACAA +
Preference number: 5 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDHYWPV*AKKLPQ
Trigger: TTGTGGCAGTTTCTTTGCCAACACTGGCCAGTAATG...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CAA 90 bp GGACAGTCAAGGACAGCGATGTGTAGGGAAAGTTTGGTTCATGCAAAAATGAATAGTCCACACTCACATTaGAGAGATCTGAGACACAGT +
Preference number: 5 (lower is better)
Translates to: GQSRTAMCRESLVHAKMNSPHSH*RDLRHS
Trigger: ACTGTGTCTCAGATCTCTCAAATGTGAGTGTGGACT...ATTCATTTTTGCATGAACCAAACTTTCCCTACACATCGCTGTCCTTGACTGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp GGACAGTCAAGGACAGCGATGTGTAGGGAAAGTTTGGTTCATGCAAAAATGAATGATGGCCTCTCTTCTTaGCTCTTGGCATTTCACTTA +
Preference number: 5 (lower is better)
Translates to: GQSRTAMCRESLVHAKMNDGLSS*LLAFHL
Trigger: TAAGTGAAATGCCAAGAGCAAAGAAGAGAGGCCATC...ATTCATTTTTGCATGAACCAAACTTTCCCTACACATCGCTGTCCTTGACTGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp GTGGTAGCCTCTTCTTCCCCACCATCTCATCAATTTATACGCATGATCTTATTTACAACAGTTGGAGCCTaGGGAACAAGGAAGTTACAC +
Preference number: 5 (lower is better)
Translates to: VVASSSPPSHQFIRMILFTTVGA*GTRKLH
Trigger: GTGTAACTTCCTTGTTCCCAAGGCTCCAACTGTTGT...AAATAAGATCATGCGTATAAATTGATGAGATGGTGGGGAAGAAGAGGCTACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATTCAAGTTCCCAAAAGTaGCTTTTCCGCACCACCCTT +
Preference number: 5 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDSSSQK*LFRTTL
Trigger: AAGGGTGGTGCGGAAAAGCAACTTTTGGGAACTTGA...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000360982.2
CDS TCA 90 bp TTATCTATAAAGTCGTCTGCACTCTTCTTTGGCATGTTATCTGCATaGCGAAGTAGCCAGATGATTTCATCACGGGCAAAGGATAATGCC +
Preference number: 5 (lower is better)
Translates to: LSIKSSALFFGMLSA*RSSQMISSRAKDNA
Trigger: GGCATTATCCTTTGCCCGTGATGAAATCATCTGGCTACTTCGTCATGCAGATAACATGCCAAAGAAGAGTGCAGACGACTTTATAGATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CAA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATAAAACAAAAAGTGCCTaGGGACCTAGCAATCCAGGT +
Preference number: 5 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDKTKSA*GPSNPG
Trigger: ACCTGGATTGCTAGGTCCCAAGGCACTTTTTGTTTT...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CAA 90 bp CCACTGACCAATGAGTGGACAAAGAAAGTGTGGTATATATACACACCACGGAATGCACATAGTTTTCTATaGACTGGAGTACGGTCATGT +
Preference number: 5 (lower is better)
Translates to: PLTNEWTKKVWYIYTPRNAHSFL*TGVRSC
Trigger: ACATGACCGTACTCCAGTCAATAGAAAACTATGTGC...ATTCCGTGGTGTGTATATATACCACACTTTCTTTGTCCACTCATTGGTCAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp CCACTGACCAATGAGTGGACAAAGAAAGTGTGGTATATATACACACCACGGAATGCCAAGCAATGTATGTaGTTGCAATGCCCTTCTATA +
Preference number: 5 (lower is better)
Translates to: PLTNEWTKKVWYIYTPRNAKQCM*LQCPSI
Trigger: TATAGAAGGGCATTGCAACAACATACATTGCTTGGC...ATTCCGTGGTGTGTATATATACCACACTTTCTTTGTCCACTCATTGGTCAGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATATCTGGTTGATGGCTTaGGCCAAGCAATGTATGTTG +
Preference number: 5 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDIWLMA*AKQCML
Trigger: CAACATACATTGCTTGGCCAAAGCCATCAACCAGAT...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CAA 90 bp GGACAGTCAAGGACAGCGATGTGTAGGGAAAGTTTGGTTCATGCAAAAATGAATAGAGCACCAAGAGGATaGTCTCAATCCTTAAGAGAA +
Preference number: 5 (lower is better)
Translates to: GQSRTAMCRESLVHAKMNRAPRG*SQSLRE
Trigger: TTCTCTTAAGGATTGAGACAATCCTCTTGGTGCTCT...ATTCATTTTTGCATGAACCAAACTTTCCCTACACATCGCTGTCCTTGACTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp ACCACTGTGCCTGGCCACCAGTACTTCTTACGTAATACTTGCTGTAGAGAATCTCTTCAGCTTCAACCTTaGCAAGATCTAACAGTTAAA +
Preference number: 5 (lower is better)
Translates to: TTVPGHQYFLRNTCCRESLQLQP*QDLTVK
Trigger: TTTAACTGTTAGATCTTGCAAAGGTTGAAGCTGAAG...AGATTCTCTACAGCAAGTATTACGTAAGAAGTACTGGTGGCCAGGCACAGTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp CCACTGACCAATGAGTGGACAAAGAAAGTGTGGTATATATACACACCACGGAATTCCCAGACAAGTGATTaGTCTCATTGGGAGAAATCT +
Preference number: 5 (lower is better)
Translates to: PLTNEWTKKVWYIYTPRNSQTSD*SHWEKS
Trigger: AGATTTCTCCCAATGAGACAAATCACTTGTCTGGGA...ATTCCGTGGTGTGTATATATACCACACTTTCTTTGTCCACTCATTGGTCAGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATCGAAAAGTTCATGTGTaGGAAATTTGGTCCCCAGTG +
Preference number: 5 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDRKVHV*EIWSPV
Trigger: CACTGGGGACCAAATTTCCAACACATGAACTTTTCG...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATGGTATTCTCTGTCACTaGCTCCATGAGTCATTTCAT +
Preference number: 5 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDGILCH*LHESFH
Trigger: ATGAAATGACTCATGGAGCAAGTGACAGAGAATACC...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CAA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATGCATCTGAAAGAGACTaGCTATGGGGTACAAATTCT +
Preference number: 5 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDASERD*LWGTNS
Trigger: AGAATTTGTACCCCATAGCAAGTCTCTTTCAGATGC...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CAA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATAGATTTCGAGCTTGTTaGGCCATTTCATCTAGGAAC +
Preference number: 5 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDRFRAC*AISSRN
Trigger: GTTCCTAGATGAAATGGCCAAACAAGCTCGAAATCT...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CAA 90 bp CCACTGACCAATGAGTGGACAAAGAAAGTGTGGTATATATACACACCACGGAATATCCCAACAATTGACTaGGTAAAGCGTATTTCCAGA +
Preference number: 5 (lower is better)
Translates to: PLTNEWTKKVWYIYTPRNIPTID*VKRISR
Trigger: TCTGGAAATACGCTTTACCAAGTCAATTGTTGGGAT...ATTCCGTGGTGTGTATATATACCACACTTTCTTTGTCCACTCATTGGTCAGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATGCACATAGTTTTCTATaGACTGGAGTACGGTCATGT +
Preference number: 5 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDAHSFL*TGVRSC
Trigger: ACATGACCGTACTCCAGTCAATAGAAAACTATGTGC...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CAA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATGCCAAGCAATGTATGTaGTTGCAATGCCCTTCTATA +
Preference number: 5 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDAKQCM*LQCPSI
Trigger: TATAGAAGGGCATTGCAACAACATACATTGCTTGGC...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CAA 90 bp TACATATCCAAATTCCTACTTTACCTCTCCAGAGATCACTGCCAACAAAGTTATAGCAACACTGTCATCTaGAGAGCCACATCATTCCAG +
Preference number: 5 (lower is better)
Translates to: YISKFLLYLSRDHCQQSYSNTVI*RATSFQ
Trigger: CTGGAATGATGTGGCTCTCAAGATGACAGTGTTGCT...ATAACTTTGTTGGCAGTGATCTCTGGAGAGGTAAAGTAGGAATTTGGATATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp ACAGTTAAATGGTTAAATGACTACCTACTTCAATGTGCTTTCTGGCAGCCAGAAATTCAAACCCCAGATTaGTTTGAGGCTGTGGCATCA +
Preference number: 5 (lower is better)
Translates to: TVKWLNDYLLQCAFWQPEIQTPD*FEAVAS
Trigger: TGATGCCACAGCCTCAAACAAATCTGGGGTTTGAAT...TTCTGGCTGCCAGAAAGCACATTGAAGTAGGTAGTCATTTAACCATTTAACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp AGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATGGATGTTAATGTATCATGTAAGAAGTACCTaGCTTCCCCTTCGCCTTCTG +
Preference number: 5 (lower is better)
Translates to: STHVGKTVIINWAWMLMYHVRST*LPLRLL
Trigger: CAGAAGGCGAAGGGGAAGCAAGGTACTTCTTACATG...ATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATCTTCCAAACTTGTCCTaGCTTCTTGATGTTGTAGAG +
Preference number: 5 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDLPNLS*LLDVVE
Trigger: CTCTACAACATCAAGAAGCAAGGACAAGTTTGGAAG...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360982.2
CDS-3UTR CAA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATACATGCCTTCCAAACTaGTCCTTGCTTCTTGATGTT +
Preference number: 5 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDTCLPN*SLLLDV
Trigger: AACATCAAGAAGCAAGGACAAGTTTGGAAGGCATGT...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360982.2
CDS-3UTR CAA 90 bp AGAGGAATTATACAATATCTGTTCTTTTGTGGCTGGCTTATTTCACTCAGCATAGACACGGCTGCCTCCTaGCATTCTCTTATGTCATTA +
Preference number: 5 (lower is better)
Translates to: RGIIQYLFFCGWLISLSIDTAAS*HSLMSL
Trigger: TAATGACATAAGAGAATGCAAGGAGGCAGCCGTGTC...TATGCTGAGTGAAATAAGCCAGCCACAAAAGAACAGATATTGTATAATTCCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATGCAGATCTTAAAAACTaGCGTCTTTCTCTGTGCATT +
Preference number: 5 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDADLKN*RLSLCI
Trigger: AATGCACAGAGAAAGACGCAAGTTTTTAAGATCTGC...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CAA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATATGCAATTGAGTATCTaGATTGAGAGGGTAACTCCA +
Preference number: 5 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDMQLSI*IERVTP
Trigger: TGGAGTTACCCTCTCAATCAAGATACTCAATTGCAT...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CAA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATATCCCAACAATTGACTaGGTAAAGCGTATTTCCAGA +
Preference number: 5 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDIPTID*VKRISR
Trigger: TCTGGAAATACGCTTTACCAAGTCAATTGTTGGGAT...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CAA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATAATTTCCTGTGTGGCTaGATTATACATAGTCATCCC +
Preference number: 5 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDNFLCG*IIHSHP
Trigger: GGGATGACTATGTATAATCAAGCCACACAGGAAATT...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CAA 90 bp GTGGTAGCCTCTTCTTCCCCACCATCTCATCAATTTATACGCATGATCTTATTTAATTTCCTGTGTGGCTaGATTATACATAGTCATCCC +
Preference number: 5 (lower is better)
Translates to: VVASSSPPSHQFIRMILFNFLCG*IIHSHP
Trigger: GGGATGACTATGTATAATCAAGCCACACAGGAAATT...AAATAAGATCATGCGTATAAATTGATGAGATGGTGGGGAAGAAGAGGCTACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp AGAGGAATTATACAATATCTGTTCTTTTGTGGCTGGCTTATTTCACTCAGCATACATTACTGGCCAGTGTaGGCAAAGAAACTGCCACAA +
Preference number: 5 (lower is better)
Translates to: RGIIQYLFFCGWLISLSIHYWPV*AKKLPQ
Trigger: TTGTGGCAGTTTCTTTGCCAACACTGGCCAGTAATG...TATGCTGAGTGAAATAAGCCAGCCACAAAAGAACAGATATTGTATAATTCCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATAAGCAATGTATGTTGTaGCAATGCCCTTCTATAGCA +
Preference number: 5 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDKQCML*QCPSIA
Trigger: TGCTATAGAAGGGCATTGCAACAACATACATTGCTT...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CAA 90 bp CCACTGACCAATGAGTGGACAAAGAAAGTGTGGTATATATACACACCACGGAATAGAAGATGTAACACTTaGTTTGTAGACAGCATGGTA +
Preference number: 5 (lower is better)
Translates to: PLTNEWTKKVWYIYTPRNRRCNT*FVDSMV
Trigger: TACCATGCTGTCTACAAACAAAGTGTTACATCTTCT...ATTCCGTGGTGTGTATATATACCACACTTTCTTTGTCCACTCATTGGTCAGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATGCTGCTCTTAGAATTTaGGGAAATGATCTGCTTCTA +
Preference number: 5 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDAALRI*GNDLLL
Trigger: TAGAAGCAGATCATTTCCCAAAATTCTAAGAGCAGC...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CAA 90 bp TACATATCCAAATTCCTACTTTACCTCTCCAGAGATCACTGCCAACAAAGTTATAAAAGGGTCACCTTTTaGCTCACCATTACATGCAGG +
Preference number: 5 (lower is better)
Translates to: YISKFLLYLSRDHCQQSYKRVTF*LTITCR
Trigger: CCTGCATGTAATGGTGAGCAAAAAGGTGACCCTTTT...ATAACTTTGTTGGCAGTGATCTCTGGAGAGGTAAAGTAGGAATTTGGATATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp AGAGGAATTATACAATATCTGTTCTTTTGTGGCTGGCTTATTTCACTCAGCATAGTGATATCATGGACTTaGGAGACTCAGAAGTGGGAG +
Preference number: 5 (lower is better)
Translates to: RGIIQYLFFCGWLISLSIVISWT*ETQKWE
Trigger: CTCCCACTTCTGAGTCTCCAAAGTCCATGATATCAC...TATGCTGAGTGAAATAAGCCAGCCACAAAAGAACAGATATTGTATAATTCCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATCACAGGGTAGGAAATTaGACTAAACAGACAGAAAGA +
Preference number: 5 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDHRVGN*TKQTER
Trigger: TCTTTCTGTCTGTTTAGTCAAATTTCCTACCCTGTG...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp GTGGTAGCCTCTTCTTCCCCACCATCTCATCAATTTATACGCATGATCTTATTTGCGCTTTGTGTAATGTaGGGAGCAAGTAATGATTTT +
Preference number: 5 (lower is better)
Translates to: VVASSSPPSHQFIRMILFALCVM*GASNDF
Trigger: AAAATCATTACTTGCTCCCAACATTACACAAAGCGC...AAATAAGATCATGCGTATAAATTGATGAGATGGTGGGGAAGAAGAGGCTACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp AGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATGGATGTTAATGTATCCTGAGCTGAGCTTCTaGGGTACTCCTAAGAAAAAC +
Preference number: 5 (lower is better)
Translates to: STHVGKTVIINWAWMLMYPELSF*GTPKKN
Trigger: GTTTTTCTTAGGAGTACCCAAGAAGCTCAGCTCAGG...ATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp GTTCCACAGTCTACAGGTAAAACCAAGGCAACAAAAATGCGTGCTTATCTTGATAGAAGATGTAACACTTaGTTTGTAGACAGCATGGTA +
Preference number: 5 (lower is better)
Translates to: VPQSTGKTKATKMRAYLDRRCNT*FVDSMV
Trigger: TACCATGCTGTCTACAAACAAAGTGTTACATCTTCT...ATCAAGATAAGCACGCATTTTTGTTGCCTTGGTTTTACCTGTAGACTGTGGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS-3UTR CAA 90 bp AGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATGGATGTTAATGTATAGACCCTTGTACCTTTaGGCTGAAGGTAAGAATTCA +
Preference number: 5 (lower is better)
Translates to: STHVGKTVIINWAWMLMYRPLYL*AEGKNS
Trigger: TGAATTCTTACCTTCAGCCAAAAGGTACAAGGGTCT...ATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp AGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATGGATGTTAATGTATATGCAATTGAGTATCTaGATTGAGAGGGTAACTCCA +
Preference number: 5 (lower is better)
Translates to: STHVGKTVIINWAWMLMYMQLSI*IERVTP
Trigger: TGGAGTTACCCTCTCAATCAAGATACTCAATTGCAT...ATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp TACATATCCAAATTCCTACTTTACCTCTCCAGAGATCACTGCCAACAAAGTTATCCATCATTACAATCATaGATACATAATAGGTTGCCC +
Preference number: 5 (lower is better)
Translates to: YISKFLLYLSRDHCQQSYPSLQS*IHNRLP
Trigger: GGGCAACCTATTATGTATCAATGATTGTAATGATGG...ATAACTTTGTTGGCAGTGATCTCTGGAGAGGTAAAGTAGGAATTTGGATATGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp TACATATCCAAATTCCTACTTTACCTCTCCAGAGATCACTGCCAACAAAGTTATTGCCTTTTTGATCTATaGCCAATGCTTTCACCTTTT +
Preference number: 5 (lower is better)
Translates to: YISKFLLYLSRDHCQQSYCLFDL*PMLSPF
Trigger: AAAAGGTGAAAGCATTGGCAATAGATCAAAAAGGCA...ATAACTTTGTTGGCAGTGATCTCTGGAGAGGTAAAGTAGGAATTTGGATATGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp TACATATCCAAATTCCTACTTTACCTCTCCAGAGATCACTGCCAACAAAGTTATACAATATCTGTTCTTTaGTGGCTGGCTTATTTCACT +
Preference number: 5 (lower is better)
Translates to: YISKFLLYLSRDHCQQSYTISVL*WLAYFT
Trigger: AGTGAAATAAGCCAGCCACAAAAGAACAGATATTGT...ATAACTTTGTTGGCAGTGATCTCTGGAGAGGTAAAGTAGGAATTTGGATATGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS-3UTR CAA 90 bp AGTACACATGTGGGGAAAACAGTGATTATAAATTGGGCATGGATGTTAATGTATGAGAAGTTAAGTAATTaGTCCATAAGTGACAGAGCT +
Preference number: 5 (lower is better)
Translates to: STHVGKTVIINWAWMLMYEKLSN*SISDRA
Trigger: AGCTCTGTCACTTATGGACAAATTACTTAACTTCTC...ATACATTAACATCCATGCCCAATTTATAATCACTGTTTTCCCCACATGTGTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361354.9
CDS GCA 72 bp GCTGACTGGGCTGCAGCACTGAGCGCGACATGGTGGTaGTGGTGCCGCCGCCGCCGCCGGCCGCCTCGCGCC +
Preference number: 6 (lower is better)
Translates to: ADWAAALSATWW*WCRRRRRPPRA
Trigger: GGCGCGAGGCGGCCGGCGGCGGCGGCGGCACCAGCACCACCATGTCGCGCTCAGTGCTGCAGCCCAGTCAGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS CCA 72 bp CCCGCCCGCGACCTCCGCCTTAGGAGAGCGCGCCCATaGCCCTCGCGCCCCAATCCCGCGCCGGCGACAGAG +
Preference number: 6 (lower is better)
Translates to: PARDLRLRRARP*PSRPNPAPATE
Trigger: CTCTGTCGCCGGCGCGGGATTGGGGCGCGAGGGCCATGGGCGCGCTCTCCTAAGGCGGAGGTCGCGGGCGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS CCA 72 bp GACTGGGCTGCAGCACTGAGCGCGACATGGTGGTGCTaGTGCCGCCGCCGCCGCCGGCCGCCTCGCGCCCAG +
Preference number: 6 (lower is better)
Translates to: DWAAALSATWWC*CRRRRRPPRAQ
Trigger: CTGGGCGCGAGGCGGCCGGCGGCGGCGGCGGCACCAGCACCACCATGTCGCGCTCAGTGCTGCAGCCCAGTC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS CCA 72 bp TCTGCTGACTGGGCTGCAGCACTGAGCGCGACATGGTaGTGCTGGTGCCGCCGCCGCCGCCGGCCGCCTCGC +
Preference number: 6 (lower is better)
Translates to: SADWAAALSATW*CWCRRRRRPPR
Trigger: GCGAGGCGGCCGGCGGCGGCGGCGGCACCAGCACCACCATGTCGCGCTCAGTGCTGCAGCCCAGTCAGCAGA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS CCA 72 bp GCTTCTGCTGACTGGGCTGCAGCACTGAGCGCGACATaGTGGTGCTGGTGCCGCCGCCGCCGCCGGCCGCCT +
Preference number: 6 (lower is better)
Translates to: ASADWAAALSAT*WCWCRRRRRPP
Trigger: AGGCGGCCGGCGGCGGCGGCGGCACCAGCACCACCATGTCGCGCTCAGTGCTGCAGCCCAGTCAGCAGAAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS CCA 72 bp CCTGGCCCGGACCGCCCACTACGCCTGATGCCGGGATaGGAGTCCCAAGCGGGGACTGAGTGGGGTCGCGTT +
Preference number: 6 (lower is better)
Translates to: PGPDRPLRLMPG*ESQAGTEWGRV
Trigger: AACGCGACCCCACTCAGTCCCCGCTTGGGACTCCCATCCCGGCATCAGGCGTAGTGGGCGGTCCGGGCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360982.2
CDS TCA 72 bp CTTCTCCGCCAGCTTCTGCTGACTGGGCTGCAGCACTaGGCGCGACATGGTGGTGCTGGTGCCGCCGCCGCC +
Preference number: 6 (lower is better)
Translates to: LLRQLLLTGLQH*ARHGGAGAAAA
Trigger: GGCGGCGGCGGCACCAGCACCACCATGTCGCGCTCAGTGCTGCAGCCCAGTCAGCAGAAGCTGGCGGAGAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS TCA 72 bp ACGCCTGATGCCGGGATGGGAGTCCCAAGCGGGGACTaGGTGGGGTCGCGTTGTGTGCTCTTTCCACTTCGC +
Preference number: 6 (lower is better)
Translates to: TPDAGMGVPSGD*VGSRCVLFPLR
Trigger: GCGAAGTGGAAAGAGCACACAACGCGACCCCACTCAGTCCCCGCTTGGGACTCCCATCCCGGCATCAGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360982.2
CDS CCA 72 bp CTGATGCCGGGATGGGAGTCCCAAGCGGGGACTGAGTaGGGTCGCGTTGTGTGCTCTTTCCACTTCGCCCCA +
Preference number: 6 (lower is better)
Translates to: LMPGWESQAGTE*GRVVCSFHFAP
Trigger: TGGGGCGAAGTGGAAAGAGCACACAACGCGACCCCACTCAGTCCCCGCTTGGGACTCCCATCCCGGCATCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360982.2
CDS CAA 72 bp TGCCTTGGGGTCTCCACATGCCTTCCAAACTTGTCCTaGCTTCTTGATGTTGTAGAGGCGGGTGAGCATGCC +
Preference number: 6 (lower is better)
Translates to: CLGVSTCLPNLS*LLDVVEAGEHA
Trigger: GGCATGCTCACCCGCCTCTACAACATCAAGAAGCAAGGACAAGTTTGGAAGGCATGTGGAGACCCCAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360982.2
CDS CCA 72 bp AGGGCTGTACTGAGACATCACATTACTGGCCAGTGTTaGCAAAGAAACTGCCACAAACACCATGAGAAGGCA +
Preference number: 6 (lower is better)
Translates to: RAVLRHHITGQC*QRNCHKHHEKA
Trigger: TGCCTTCTCATGGTGTTTGTGGCAGTTTCTTTGCCAACACTGGCCAGTAATGTGATGTCTCAGTACAGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360982.2
ENST00000361354.9
ENST00000478449.5
CDS CAA 90 bp TCAGAGAGGACAGTAGCCAATTCCTTCAGTGCAGATCTTAAAAACTaGCGTCTTTCTCTGTGCATTGAACCAGCATGTGACACGGCTGCC +
Preference number: 6 (lower is better)
Translates to: SERTVANSFSADLKN*RLSLCIEPACDTAA
Trigger: GGCAGCCGTGTCACATGCTGGTTCAATGCACAGAGAAAGACGCAAGTTTTTAAGATCTGCACTGAAGGAATTGGCTACTGTCCTCTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS CCA 72 bp AGAGAGGTATTCACAAGGCATAGTGTCGGACTGTGCTaGATTAAGCATTGTACTAGGTGCACTGATGAGGCT +
Preference number: 6 (lower is better)
Translates to: REVFTRHSVGLC*IKHCTRCTDEA
Trigger: AGCCTCATCAGTGCACCTAGTACAATGCTTAATCCAGCACAGTCCGACACTATGCCTTGTGAATACCTCTCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS TCA 72 bp AAAACAAAAAGTGCCTTGGGACCTAGCAATCCAGGTTaGTCAGAGAGGACAGTAGCCAATTCCTTCAGTGCA +
Preference number: 6 (lower is better)
Translates to: KTKSALGPSNPG*SERTVANSFSA
Trigger: TGCACTGAAGGAATTGGCTACTGTCCTCTCTGATCAACCTGGATTGCTAGGTCCCAAGGCACTTTTTGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS TCA 72 bp AAGTCGTCTGCACTCTTCTTTGGCATGTTATCTGCATaGCGAAGTAGCCAGATGATTTCATCACGGGCAAAG +
Preference number: 6 (lower is better)
Translates to: KSSALFFGMLSA*RSSQMISSRAK
Trigger: CTTTGCCCGTGATGAAATCATCTGGCTACTTCGTCATGCAGATAACATGCCAAAGAAGAGTGCAGACGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS TCA 72 bp ATGTTGTTGCAATGCCCTTCTATAGCAGGGCTGTACTaGGACATCACATTACTGGCCAGTGTTGGCAAAGAA +
Preference number: 6 (lower is better)
Translates to: MLLQCPSIAGLY*DITLLASVGKE
Trigger: TTCTTTGCCAACACTGGCCAGTAATGTGATGTCTCAGTACAGCCCTGCTATAGAAGGGCATTGCAACAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360982.2
ENST00000361354.9
ENST00000478449.5
CDS GCA 72 bp CAAAGAGAGGTATTCACAAGGCATAGTGTCGGACTGTaGTGGATTAAGCATTGTACTAGGTGCACTGATGAG +
Preference number: 6 (lower is better)
Translates to: QREVFTRHSVGL*WIKHCTRCTDE
Trigger: CTCATCAGTGCACCTAGTACAATGCTTAATCCAGCACAGTCCGACACTATGCCTTGTGAATACCTCTCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS CCA 72 bp AGGGTTTTCATAATCCACAATCATCTGGCCAAGGCGTaGGTATTCTCTGTCACTTGCTCCATGAGTCATTTC +
Preference number: 6 (lower is better)
Translates to: RVFIIHNHLAKA*VFSVTCSMSHF
Trigger: GAAATGACTCATGGAGCAAGTGACAGAGAATACCCACGCCTTGGCCAGATGATTGTGGATTATGAAAACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS CCA 72 bp AGCATTGTACTAGGTGCACTGATGAGGCTCAATAACTaGGCATTTCTCCACTGGTCAGCTGAAAGATTCCTT +
Preference number: 6 (lower is better)
Translates to: SIVLGALMRLNN*AFLHWSAERFL
Trigger: AAGGAATCTTTCAGCTGACCAGTGGAGAAATGCCCAGTTATTGAGCCTCATCAGTGCACCTAGTACAATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360982.2
ENST00000361354.9
CDS GCA 72 bp GATAAGATAGGATGGTTTTGCCTTGGGGTCTCCACATaGCTTCCAAACTTGTCCTTGCTTCTTGATGTTGTA +
Preference number: 6 (lower is better)
Translates to: DKIGWFCLGVST*LPNLSLLLDVV
Trigger: TACAACATCAAGAAGCAAGGACAAGTTTGGAAGGCATGTGGAGACCCCAAGGCAAAACCATCCTATCTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360982.2
CDS GCA 72 bp AGACATCACATTACTGGCCAGTGTTGGCAAAGAAACTaGCACAAACACCATGAGAAGGCAGGCAATTTTATA +
Preference number: 6 (lower is better)
Translates to: RHHITGQCWQRN*HKHHEKAGNFI
Trigger: TATAAAATTGCCTGCCTTCTCATGGTGTTTGTGGCAGTTTCTTTGCCAACACTGGCCAGTAATGTGATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360982.2
ENST00000361354.9
ENST00000478449.5
CDS CAA 90 bp GTGCTTCTTGTGCCAATGATCGGAAGGATAAAATTACACCAATTATaGTCATCCTCTTCAAGACACTGTCAACAGCTAAATTCAAAGAAA +
Preference number: 6 (lower is better)
Translates to: VLLVPMIGRIKLHQL*SSSSRHCQQLNSKK
Trigger: TTTCTTTGAATTTAGCTGTTGACAGTGTCTTGAAGAGGATGACAATAATTGGTGTAATTTTATCCTTCCGATCATTGGCACAAGAAGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492058.1
CDS CCA 72 bp GTTATGAGAGAAGGAAAGTTGTCTATAAAAGGGCAATaGCTTGCTCAATTTAGCAAGAAAGTAGGAACTATA +
Preference number: 6 (lower is better)
Translates to: VMREGKLSIKGQ*LAQFSKKVGTI
Trigger: TATAGTTCCTACTTTCTTGCTAAATTGAGCAAGCCATTGCCCTTTTATAGACAACTTTCCTTCTCTCATAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493359.1