RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NCF2 (Homo sapiens)

Ensembl gene IDs: ENSG00000116701

Ensembl transcript IDs: ENST00000367535.8, ENST00000367536.5, ENST00000413720.5, ENST00000418089.5, ENST00000419402.1, ENST00000420553.5, ENST00000469280.1

Found 296 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp CAGCTTGATGAATGTTTACAGTGTGAACACAGCTGGCTAGCTAGCACTCAGAGCCCCAGGAAATCATCCTaGGTACTCACATCATTGTCT +
Preference number: 2 (lower is better)
Translates to: QLDECLQCEHSWLASTQSPRKSS*VLTSLS
Trigger: AGACAATGATGTGAGTACCCAGGATGATTTCCTGGG...GCTCTGAGTGCTAGCTAGCCAGCTGTGTTCACACTGTAAACATTCATCAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
3UTR-3UTR CCA 90 bp AAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTCAGTGTGAACACAGCTaGCTAGCTAGCACTCAGAGC +
Preference number: 2 (lower is better)
Translates to: KQEYLYLLLGPGLGCLVFQCEHS*LASTQS
Trigger: GCTCTGAGTGCTAGCTAGCCAGCTGTGTTCACACTG...AAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
3UTR-3UTR CCA 90 bp GTAATGGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGCCCAGGAAATCATCCTaGGTACTCACATCATTGTCT +
Preference number: 2 (lower is better)
Translates to: VMVQKQEYLYLLLGPGLGPRKSS*VLTSLS
Trigger: AGACAATGATGTGAGTACCCAGGATGATTTCCTGGG...CCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACCATTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
3UTR-3UTR CCA 90 bp AAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTCCCAGGAAATCATCCTaGGTACTCACATCATTGTCT +
Preference number: 2 (lower is better)
Translates to: KQEYLYLLLGPGLGCLVFPRKSS*VLTSLS
Trigger: AGACAATGATGTGAGTACCCAGGATGATTTCCTGGG...AAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
3UTR CCA 72 bp CCATCTCCTCACCCACTGTGCCCCAGGAAATCATCCTaGGTACTCACATCATTGTCTAGTAGGTTAAATTTT +
Preference number: 3 (lower is better)
Translates to: PSPHPLCPRKSS*VLTSLSSRLNF
Trigger: AAAATTTAACCTACTAGACAATGATGTGAGTACCCAGGATGATTTCCTGGGGCACAGTGGGTGAGGAGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
3UTR-3UTR CAA 90 bp GGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTCACCAAATGTACAGCTaGATGAATGTTTACAGTGTG +
Preference number: 3 (lower is better)
Translates to: GSETGIFVLTPWAWTWVSHQMYS*MNVYSV
Trigger: CACACTGTAAACATTCATCAAGCTGTACATTTGGTG...AGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
3UTR-3UTR CAA 90 bp GTAATGGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGCACCAAATGTACAGCTaGATGAATGTTTACAGTGTG +
Preference number: 3 (lower is better)
Translates to: VMVQKQEYLYLLLGPGLGHQMYS*MNVYSV
Trigger: CACACTGTAAACATTCATCAAGCTGTACATTTGGTG...CCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACCATTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
3UTR CCA 72 bp AATGGTTCAGAAACAGGAATATTTGTACTTACTCCTTaGGCCTGGACTTGGGTGTCTTGTTTTTGTAAGATG +
Preference number: 3 (lower is better)
Translates to: NGSETGIFVLTP*AWTWVSCFCKM
Trigger: CATCTTACAAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
3UTR-3UTR CAA 90 bp CCAATTACAGTAATGGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTCACCAAATGTACAGCTaGATGAATGTTTACAGTGTG +
Preference number: 3 (lower is better)
Translates to: PITVMVQKQEYLYLLLGPHQMYS*MNVYSV
Trigger: CACACTGTAAACATTCATCAAGCTGTACATTTGGTG...AGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACCATTACTGTAATTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp CACTCAGAGCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCGGGTGGAGGCTCAGCTaGCTGTGGTTGCAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: HSEQETGSVPGRLSRALSGWRLS*LWLQRG
Trigger: GCCCCTCTGCAACCACAGGCAGCTGAGCCTCCACCC...GGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGCTCTGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp GCACTCAGAGCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCGGGTGGAGGCTCAGCTaGCTGTGGTTGCAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: ALRARNRISTWKTLSCPFGWRLS*LWLQRG
Trigger: GCCCCTCTGCAACCACAGGCAGCTGAGCCTCCACCC...GAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGCTCTGAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp GCACTCAGAGCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCGGGAGTGGGGGTCCTaGACGGCACTGAAGGCATCC +
Preference number: 4 (lower is better)
Translates to: ALRARNRISTWKTLSCPFREWGS*TALKAS
Trigger: GGATGCCTTCAGTGCCGTCCAGGACCCCCACTCCCG...GAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGCTCTGAGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp GCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTGGTCCTGGACGGCACTaGAGGCATCCAGGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: ARNRISTWKTLSCPFQTLGPGRH*RHPGLP
Trigger: AGGGAGCCCTGGATGCCTTCAGTGCCGTCCAGGACC...AAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp TCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCCATCCACTTTTCGGTCCTGGACGGCACTaGAGGCATCCAGGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: SVPGRLSRALSRHFHPLFGPGRH*RHPGLP
Trigger: AGGGAGCCCTGGATGCCTTCAGTGCCGTCCAGGACC...GAAAAGTGGATGGAAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp GCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCGGGAGTGGGGGTCCTaGACGGCACTGAAGGCATCC +
Preference number: 4 (lower is better)
Translates to: ARNRISTWKTLSCPFQTLREWGS*TALKAS
Trigger: GGATGCCTTCAGTGCCGTCCAGGACCCCCACTCCCG...AAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp TCTCTCGTGCCCTTTCCAGACACTTCCATCCACTTTTCCTCTCCCCTAACTCCTGCTGGGATGTCGGACTaGGGAGAGCTTTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SLVPFPDTSIHFSSPLTPAGMSD*GELSSW
Trigger: CCAGGAGGAAAGCTCTCCGCAGTCCGACATCCCAGC...AGGAGTTAGGGGAGAGGAAAAGTGGATGGAAGTGTCTGGAAAGGGCACGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp CACTCAGAGCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGGCTCAGCTGCCTGTaGTTGCAGAGGGGCAAACCC +
Preference number: 4 (lower is better)
Translates to: HSEQETGSVPGRLSRALSRLSCL*LQRGKP
Trigger: GGGTTTGCCCCTCTGCAACCACAGGCAGCTGAGCCT...GGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGCTCTGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp GCACTCAGAGCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCGGTTTTCGGTCTGGGTaGAGGCTCAGCTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: ALRARNRISTWKTLSCPFGFRSG*RLSCLW
Trigger: CCACAGGCAGCTGAGCCTCCACCCAGACCGAAAACC...GAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGCTCTGAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp TCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCCATCCACTTTTCCCAAATAGCACACGGTaGGCCTCCCCTTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SVPGRLSRALSRHFHPLFPNSTR*ASPSRA
Trigger: GGCTCTGGAAGGGGAGGCTCACCGTGTGCTATTTGG...GAAAAGTGGATGGAAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp GCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTGCTGGGATGTCGGACTaGGGAGAGCTTTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: ARNRISTWKTLSCPFQTLAGMSD*GELSSW
Trigger: CCAGGAGGAAAGCTCTCCGCAGTCCGACATCCCAGC...AAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp GCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTAGGCTCAGCTGCCTGTaGTTGCAGAGGGGCAAACCC +
Preference number: 4 (lower is better)
Translates to: ARNRISTWKTLSCPFQTLRLSCL*LQRGKP
Trigger: GGGTTTGCCCCTCTGCAACCACAGGCAGCTGAGCCT...AAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp TCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCCATCCACTTTTCAGGCTCAGCTGCCTGTaGTTGCAGAGGGGCAAACCC +
Preference number: 4 (lower is better)
Translates to: SVPGRLSRALSRHFHPLFRLSCL*LQRGKP
Trigger: GGGTTTGCCCCTCTGCAACCACAGGCAGCTGAGCCT...GAAAAGTGGATGGAAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp GCACTCAGAGCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCGGAACTAGGAGGAGCTaGGATGTCGGACTGCGGAGA +
Preference number: 4 (lower is better)
Translates to: ALRARNRISTWKTLSCPFGTRRS*DVGLRR
Trigger: TCTCCGCAGTCCGACATCCCAGCTCCTCCTAGTTCC...GAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGCTCTGAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp CAGCTTGATGAATGTTTACAGTGTGAACACAGCTGGCTAGCTAGCACTCAGAGCCCAAATAGCACACGGTaGGCCTCCCCTTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: QLDECLQCEHSWLASTQSPNSTR*ASPSRA
Trigger: GGCTCTGGAAGGGGAGGCTCACCGTGTGCTATTTGG...GCTCTGAGTGCTAGCTAGCCAGCTGTGTTCACACTGTAAACATTCATCAAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp CACTCAGAGCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCTGCCCACCTTCCCTTTaGACTCCCCTTCCAGCCATT +
Preference number: 4 (lower is better)
Translates to: HSEQETGSVPGRLSRALSCPPSL*TPLPAI
Trigger: AATGGCTGGAAGGGGAGTGCAAAGGGAAGGTGGGCA...GGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGCTCTGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp GCACTCAGAGCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCTGCCCACCTTCCCTTTaGACTCCCCTTCCAGCCATT +
Preference number: 4 (lower is better)
Translates to: ALRARNRISTWKTLSCPFCPPSL*TPLPAI
Trigger: AATGGCTGGAAGGGGAGTGCAAAGGGAAGGTGGGCA...GAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGCTCTGAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp CAGCTTGATGAATGTTTACAGTGTGAACACAGCTGGCTAGCTAGCACTCAGAGCAAGCAAATCCGGGAGTaGGGGTCCTGGACGGCACTG +
Preference number: 4 (lower is better)
Translates to: QLDECLQCEHSWLASTQSKQIRE*GSWTAL
Trigger: CAGTGCCGTCCAGGACCCCCACTCCCGGATTTGCTT...GCTCTGAGTGCTAGCTAGCCAGCTGTGTTCACACTGTAAACATTCATCAAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp TCTCTCGTGCCCTTTCCAGACACTTCCATCCACTTTTCCTCTCCCCTAACTCCTAGCCCTGAAGATCTCTaGGGTTTTCGGTCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SLVPFPDTSIHFSSPLTPSPEDL*GFRSGW
Trigger: CCACCCAGACCGAAAACCCCAGAGATCTTCAGGGCT...AGGAGTTAGGGGAGAGGAAAAGTGGATGGAAGTGTCTGGAAAGGGCACGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp GCACTCAGAGCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCAGCCCTGAAGATCTCTaGGGTTTTCGGTCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: ALRARNRISTWKTLSCPFSPEDL*GFRSGW
Trigger: CCACCCAGACCGAAAACCCCAGAGATCTTCAGGGCT...GAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGCTCTGAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp GCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTGGAACTAGGAGGAGCTaGGATGTCGGACTGCGGAGA +
Preference number: 4 (lower is better)
Translates to: ARNRISTWKTLSCPFQTLGTRRS*DVGLRR
Trigger: TCTCCGCAGTCCGACATCCCAGCTCCTCCTAGTTCC...AAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp AAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCCCACAGGCAAACAGCTTaGACTGGAGCCCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: KKQDQYLEDSLVPFPDTSHRQTA*TGAPGS
Trigger: AGATCCTGGGGCTCCAGTTCAAGCTGTTTGCCTGTG...GGAAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp TCTCTCGTGCCCTTTCCAGACACTTCCATCCACTTTTCCTCTCCCCTAACTCCTCCAGAGAAACTGTCTTaGTCCACCACAGATGCCACG +
Preference number: 4 (lower is better)
Translates to: SLVPFPDTSIHFSSPLTPPEKLS*STTDAT
Trigger: CGTGGCATCTGTGGTGGATCAAGACAGTTTCTCTGG...AGGAGTTAGGGGAGAGGAAAAGTGGATGGAAGTGTCTGGAAAGGGCACGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp CAGCTTGATGAATGTTTACAGTGTGAACACAGCTGGCTAGCTAGCACTCAGAGCTTGTTTCTGGCCTGGTaGCAGCTGGGGTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: QLDECLQCEHSWLASTQSLFLAW*QLGSSR
Trigger: CCTGGAAGACCCCAGCTGTCACCAGGCCAGAAACAA...GCTCTGAGTGCTAGCTAGCCAGCTGTGTTCACACTGTAAACATTCATCAAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp TCTCTCGTGCCCTTTCCAGACACTTCCATCCACTTTTCCTCTCCCCTAACTCCTTTGGTCGAAACAGCTTaGCCACAGGGATCACCACTG +
Preference number: 4 (lower is better)
Translates to: SLVPFPDTSIHFSSPLTPLVETA*PQGSPL
Trigger: CAGTGGTGATCCCTGTGGGCAAGCTGTTTCGACCAA...AGGAGTTAGGGGAGAGGAAAAGTGGATGGAAGTGTCTGGAAAGGGCACGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
CDS-3UTR GCA 90 bp CAGCTTGATGAATGTTTACAGTGTGAACACAGCTGGCTAGCTAGCACTCAGAGCTTGATCCACCACAGATaGCACGACCGTCGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: QLDECLQCEHSWLASTQSLIHHR*HDRRLA
Trigger: GGCAAGGCGACGGTCGTGGCATCTGTGGTGGATCAA...GCTCTGAGTGCTAGCTAGCCAGCTGTGTTCACACTGTAAACATTCATCAAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
CDS-3UTR TCA 90 bp TGCCCCAGGAAATCATCCTGGGTACTCACATCATTGTCTAGTAGGTTAAATTTTGGTCCTGGACGGCACTaGAGGCATCCAGGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: CPRKSSWVLTSLSSRLNFGPGRH*RHPGLP
Trigger: AGGGAGCCCTGGATGCCTTCAGTGCCGTCCAGGACC...AAAATTTAACCTACTAGACAATGATGTGAGTACCCAGGATGATTTCCTGGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp TCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCCATCCACTTTTCCCAGAGAAACTGTCTTaGTCCACCACAGATGCCACG +
Preference number: 4 (lower is better)
Translates to: SVPGRLSRALSRHFHPLFPEKLS*STTDAT
Trigger: CGTGGCATCTGTGGTGGATCAAGACAGTTTCTCTGG...GAAAAGTGGATGGAAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp GTAATGGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGCCAAATAGCACACGGTaGGCCTCCCCTTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: VMVQKQEYLYLLLGPGLGPNSTR*ASPSRA
Trigger: GGCTCTGGAAGGGGAGGCTCACCGTGTGCTATTTGG...CCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACCATTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp GGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTTGTTTCTGGCCTGGTaGCAGCTGGGGTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GSETGIFVLTPWAWTWVSLFLAW*QLGSSR
Trigger: CCTGGAAGACCCCAGCTGTCACCAGGCCAGAAACAA...AGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp TCTCTCGTGCCCTTTCCAGACACTTCCATCCACTTTTCCTCTCCCCTAACTCCTACTTGTAGTGCACCTTaGGTGTGTAGGGCATGGGAA +
Preference number: 4 (lower is better)
Translates to: SLVPFPDTSIHFSSPLTPTCSAP*VCRAWE
Trigger: TTCCCATGCCCTACACACTCAAGGTGCACTACAAGT...AGGAGTTAGGGGAGAGGAAAAGTGGATGGAAGTGTCTGGAAAGGGCACGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp TCTCTCGTGCCCTTTCCAGACACTTCCATCCACTTTTCCTCTCCCCTAACTCCTCTTCATGCTGTCTTCTaGAAGGGGCACCAGCTCATT +
Preference number: 4 (lower is better)
Translates to: SLVPFPDTSIHFSSPLTPLHAVF*KGHQLI
Trigger: AATGAGCTGGTGCCCCTTTCAGAAGACAGCATGAAG...AGGAGTTAGGGGAGAGGAAAAGTGGATGGAAGTGTCTGGAAAGGGCACGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp CAGCTTGATGAATGTTTACAGTGTGAACACAGCTGGCTAGCTAGCACTCAGAGCGTCCTTCTTGTCCGCTaGCAGCACCCCTTCATTCCA +
Preference number: 4 (lower is better)
Translates to: QLDECLQCEHSWLASTQSVLLVR*QHPFIP
Trigger: TGGAATGAAGGGGTGCTGGCAGCGGACAAGAAGGAC...GCTCTGAGTGCTAGCTAGCCAGCTGTGTTCACACTGTAAACATTCATCAAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp CACTCAGAGCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCTGGGCTCAGACTTCATaGTCGTGGCCAATGCTAACT +
Preference number: 4 (lower is better)
Translates to: HSEQETGSVPGRLSRALSWAQTS*SWPMLT
Trigger: AGTTAGCATTGGCCACGAGCATGAAGTCTGAGCCCA...GGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGCTCTGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367535.8
ENST00000367536.5
CDS-3UTR GCA 90 bp AAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCCTTGGTCGAAACAGCTTaGCCACAGGGATCACCACTG +
Preference number: 4 (lower is better)
Translates to: KKQDQYLEDSLVPFPDTSLVETA*PQGSPL
Trigger: CAGTGGTGATCCCTGTGGGCAAGCTGTTTCGACCAA...GGAAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
CDS-3UTR GCA 90 bp TCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCCATCCACTTTTCTTGGTCGAAACAGCTTaGCCACAGGGATCACCACTG +
Preference number: 4 (lower is better)
Translates to: SVPGRLSRALSRHFHPLFLVETA*PQGSPL
Trigger: CAGTGGTGATCCCTGTGGGCAAGCTGTTTCGACCAA...GAAAAGTGGATGGAAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
CDS-3UTR GCA 90 bp TGCCCCAGGAAATCATCCTGGGTACTCACATCATTGTCTAGTAGGTTAAATTTTGGGTGGAGGCTCAGCTaGCTGTGGTTGCAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: CPRKSSWVLTSLSSRLNFGWRLS*LWLQRG
Trigger: GCCCCTCTGCAACCACAGGCAGCTGAGCCTCCACCC...AAAATTTAACCTACTAGACAATGATGTGAGTACCCAGGATGATTTCCTGGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp AAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTGGGTGGAGGCTCAGCTaGCTGTGGTTGCAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: KQEYLYLLLGPGLGCLVFGWRLS*LWLQRG
Trigger: GCCCCTCTGCAACCACAGGCAGCTGAGCCTCCACCC...AAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp GTAATGGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGGCTGGGATGTCGGACTaGGGAGAGCTTTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: VMVQKQEYLYLLLGPGLGAGMSD*GELSSW
Trigger: CCAGGAGGAAAGCTCTCCGCAGTCCGACATCCCAGC...CCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACCATTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp GGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTGTAAGGGGGCACCAGCTCATTaGTGTCCCGAGGCCGATAGC +
Preference number: 4 (lower is better)
Translates to: GIFVLTPWAWTWVSCFCKGAPAH*CPEADS
Trigger: GCTATCGGCCTCGGGACAGCAATGAGCTGGTGCCCC...CTTACAAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp GCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCCCAGGCATCCTTCATaGTGTCTTCTGAAAGGGGCA +
Preference number: 4 (lower is better)
Translates to: ARNRISTWKTLSCPFQTLPRHPS*CLLKGA
Trigger: TGCCCCTTTCAGAAGACAGCATGAAGGATGCCTGGG...AAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp GCACTCAGAGCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCTAGGTAATCCTTCTTaGCCAGCTGAGCCACTTGTC +
Preference number: 4 (lower is better)
Translates to: ALRARNRISTWKTLSCPFLGNPS*PAEPLV
Trigger: GACAAGTGGCTCAGCTGGCCAAGAAGGATTACCTAG...GAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGCTCTGAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
CDS-3UTR CCA 90 bp GTAATGGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGAGGCTCAGCTGCCTGTaGTTGCAGAGGGGCAAACCC +
Preference number: 4 (lower is better)
Translates to: VMVQKQEYLYLLLGPGLGRLSCL*LQRGKP
Trigger: GGGTTTGCCCCTCTGCAACCACAGGCAGCTGAGCCT...CCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACCATTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp AAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCCCAGTGTGAACACAGCTaGCTAGCTAGCACTCAGAGC +
Preference number: 4 (lower is better)
Translates to: KKQDQYLEDSLVPFPDTSQCEHS*LASTQS
Trigger: GCTCTGAGTGCTAGCTAGCCAGCTGTGTTCACACTG...GGAAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp GGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTCACAGGCAAACAGCTTaGACTGGAGCCCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: GSETGIFVLTPWAWTWVSHRQTA*TGAPGS
Trigger: AGATCCTGGGGCTCCAGTTCAAGCTGTTTGCCTGTG...AGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp GCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTTCCTTCTTGGCCAGCTaGGCCACTTGTCTCTCATTT +
Preference number: 4 (lower is better)
Translates to: ARNRISTWKTLSCPFQTLSFLAS*ATCLSF
Trigger: AAATGAGAGACAAGTGGCTCAGCTGGCCAAGAAGGA...AAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
CDS-3UTR TCA 90 bp AAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCCACTTGTAGTGCACCTTaGGTGTGTAGGGCATGGGAA +
Preference number: 4 (lower is better)
Translates to: KKQDQYLEDSLVPFPDTSTCSAP*VCRAWE
Trigger: TTCCCATGCCCTACACACTCAAGGTGCACTACAAGT...GGAAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp GCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCGGGCTGAGTCTTCATaGCTACCGTGTACTTGTAGT +
Preference number: 4 (lower is better)
Translates to: ARNRISTWKTLSCPFQTLRAESS*LPCTCS
Trigger: ACTACAAGTACACGGTAGTCATGAAGACTCAGCCCG...AAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp GCACTCAGAGCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCTTGGAAGTAAGCCACTaGCAAGTGCTTGTCTCGGTT +
Preference number: 4 (lower is better)
Translates to: ALRARNRISTWKTLSCPFLEVSH*QVLVSV
Trigger: AACCGAGACAAGCACTTGGCAGTGGCTTACTTCCAA...GAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGCTCTGAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp TCTCTCGTGCCCTTTCCAGACACTTCCATCCACTTTTCCTCTCCCCTAACTCCTTTGGAAGTAAGCCACTaGCAAGTGCTTGTCTCGGTT +
Preference number: 4 (lower is better)
Translates to: SLVPFPDTSIHFSSPLTPLEVSH*QVLVSV
Trigger: AACCGAGACAAGCACTTGGCAGTGGCTTACTTCCAA...AGGAGTTAGGGGAGAGGAAAAGTGGATGGAAGTGTCTGGAAAGGGCACGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp TCTCTCGTGCCCTTTCCAGACACTTCCATCCACTTTTCCTCTCCCCTAACTCCTGGCTCATATAGCTTCTaGTTCCAGACACACTCCATC +
Preference number: 4 (lower is better)
Translates to: SLVPFPDTSIHFSSPLTPGSYSF*FQTHSI
Trigger: GATGGAGTGTGTCTGGAAGCAGAAGCTATATGAGCC...AGGAGTTAGGGGAGAGGAAAAGTGGATGGAAGTGTCTGGAAAGGGCACGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367535.8
ENST00000367536.5
CDS-3UTR GCA 90 bp GGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTCCACGACCGTCGCCTTaGCTAGGTAATCCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: GSETGIFVLTPWAWTWVSPRPSP*LGNPSW
Trigger: CCAAGAAGGATTACCTAGGCAAGGCGACGGTCGTGG...AGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
CDS-3UTR GCA 90 bp GCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCTGGTTCAAGGTAGTTaGAGGGAACAAGCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: ARNRISTWKTLSCPFQTLLVQGS*REQAPS
Trigger: AGAAGGGGCTTGTTCCCTGCAACTACCTTGAACCAG...AAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp GCACTCAGAGCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCTCATAACTGAAGAGTaGCTCCACTTGGCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: ALRARNRISTWKTLSCPFLITEE*LHLAAF
Trigger: AAAGGCAGCCAAGTGGAGGCACTCTTCAGTTATGAG...GAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGCTCTGAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp CAGCAGAAGGGTGCTAAATCTTACAAACAAGTAATAGGGCTTCATTTTCTTCAGCGGGAGTGGGGGTCCTaGACGGCACTGAAGGCATCC +
Preference number: 4 (lower is better)
Translates to: QQKGAKSYKQVIGLHFLQREWGS*TALKAS
Trigger: GGATGCCTTCAGTGCCGTCCAGGACCCCCACTCCCG...CTGAAGAAAATGAAGCCCTATTACTTGTTTGTAAGATTTAGCACCCTTCTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp CCAATTACAGTAATGGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTCGGGAGTGGGGGTCCTaGACGGCACTGAAGGCATCC +
Preference number: 4 (lower is better)
Translates to: PITVMVQKQEYLYLLLGPREWGS*TALKAS
Trigger: GGATGCCTTCAGTGCCGTCCAGGACCCCCACTCCCG...AGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACCATTACTGTAATTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp TCTCTCGTGCCCTTTCCAGACACTTCCATCCACTTTTCCTCTCCCCTAACTCCTCGATTTTGGAATGTCTaGGCTCAGACTTCATGCTCG +
Preference number: 4 (lower is better)
Translates to: SLVPFPDTSIHFSSPLTPRFWNV*AQTSCS
Trigger: CGAGCATGAAGTCTGAGCCCAGACATTCCAAAATCG...AGGAGTTAGGGGAGAGGAAAAGTGGATGGAAGTGTCTGGAAAGGGCACGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367535.8
ENST00000367536.5
CDS-3UTR CCA 90 bp GGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTGTAAGGGTTTTCGGTCTGGGTaGAGGCTCAGCTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: GIFVLTPWAWTWVSCFCKGFRSG*RLSCLW
Trigger: CCACAGGCAGCTGAGCCTCCACCCAGACCGAAAACC...CTTACAAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp TCTCTCGTGCCCTTTCCAGACACTTCCATCCACTTTTCCTCTCCCCTAACTCCTTCATCTGGAAAGCCTTaGTCACCCACTGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: SLVPFPDTSIHFSSPLTPSSGKP*SPTVFS
Trigger: TGAGAACACAGTGGGTGACCAAGGCTTTCCAGATGA...AGGAGTTAGGGGAGAGGAAAAGTGGATGGAAGTGTCTGGAAAGGGCACGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp GCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTTTCCTTGGGTTCATCTaGAAAGCCTTGGTCACCCAC +
Preference number: 4 (lower is better)
Translates to: ARNRISTWKTLSCPFQTLFLGFI*KALVTH
Trigger: GTGGGTGACCAAGGCTTTCCAGATGAACCCAAGGAA...AAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp CACTCAGAGCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAAACTCCAGGTCCTCTaGTTGGGTAGCCTCATAACT +
Preference number: 4 (lower is better)
Translates to: HSEQETGSVPGRLSRALSKLQVL*LGSLIT
Trigger: AGTTATGAGGCTACCCAACCAGAGGACCTGGAGTTT...GGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGCTCTGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp TCTCTCGTGCCCTTTCCAGACACTTCCATCCACTTTTCCTCTCCCCTAACTCCTAAACTCCAGGTCCTCTaGTTGGGTAGCCTCATAACT +
Preference number: 4 (lower is better)
Translates to: SLVPFPDTSIHFSSPLTPKLQVL*LGSLIT
Trigger: AGTTATGAGGCTACCCAACCAGAGGACCTGGAGTTT...AGGAGTTAGGGGAGAGGAAAAGTGGATGGAAGTGTCTGGAAAGGGCACGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp CACTCAGAGCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCCCTTGGGCCTGGACTTaGGTGTCTTGTTTTTGTAAG +
Preference number: 4 (lower is better)
Translates to: HSEQETGSVPGRLSRALSPWAWT*VSCFCK
Trigger: CTTACAAAAACAAGACACCCAAGTCCAGGCCCAAGG...GGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGCTCTGAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp CACTCAGAGCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCCTTACTCCTTGGGCCTaGACTTGGGTGTCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: HSEQETGSVPGRLSRALSLTPWA*TWVSCF
Trigger: AAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAG...GGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGCTCTGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp GCACTCAGAGCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCTTTGTACTTACTCCTTaGGCCTGGACTTGGGTGTCT +
Preference number: 4 (lower is better)
Translates to: ALRARNRISTWKTLSCPFFVLTP*AWTWVS
Trigger: AGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAA...GAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGCTCTGAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp GGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTGTAAGTTGTTTCTGGCCTGGTaGCAGCTGGGGTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GIFVLTPWAWTWVSCFCKLFLAW*QLGSSR
Trigger: CCTGGAAGACCCCAGCTGTCACCAGGCCAGAAACAA...CTTACAAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp CAGCTTGATGAATGTTTACAGTGTGAACACAGCTGGCTAGCTAGCACTCAGAGCCGGGCTGAGTCTTCATaGCTACCGTGTACTTGTAGT +
Preference number: 4 (lower is better)
Translates to: QLDECLQCEHSWLASTQSRAESS*LPCTCS
Trigger: ACTACAAGTACACGGTAGTCATGAAGACTCAGCCCG...GCTCTGAGTGCTAGCTAGCCAGCTGTGTTCACACTGTAAACATTCATCAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp CACTCAGAGCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCCTGCCTTTCTTAAGCTaGGGTTCTGTTGTCTGGTTA +
Preference number: 4 (lower is better)
Translates to: HSEQETGSVPGRLSRALSLPFLS*GSVVWL
Trigger: TAACCAGACAACAGAACCTCAGCTTAAGAAAGGCAG...GGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGCTCTGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp GCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTATTATATCCCCTTCCTaGAACTCCAGGTCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: ARNRISTWKTLSCPFQTLIISPS*NSRSSG
Trigger: ACCAGAGGACCTGGAGTTTCAGGAAGGGGATATAAT...AAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp GGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTGTAAGACTTTCTGGGCCAGATaGGTAGAATGGGGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: GIFVLTPWAWTWVSCFCKTFWAR*VEWGPA
Trigger: GGCTGGGCCCCATTCTACTCATCTGGCCCAGAAAGT...CTTACAAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp GCACTCAGAGCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCGGTAAAGGCCTTCTCTaGTTCAGTCATGTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: ALRARNRISTWKTLSCPFGKGLL*FSHVLQ
Trigger: CTGAAGAACATGACTGAAGCAGAGAAGGCCTTTACC...GAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGCTCTGAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp GCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTTTGGAAGTAAGCCACTaGCAAGTGCTTGTCTCGGTT +
Preference number: 4 (lower is better)
Translates to: ARNRISTWKTLSCPFQTLLEVSH*QVLVSV
Trigger: AACCGAGACAAGCACTTGGCAGTGGCTTACTTCCAA...AAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp CAGCTTGATGAATGTTTACAGTGTGAACACAGCTGGCTAGCTAGCACTCAGAGCTGGGCTCAGACTTCATaGTCGTGGCCAATGCTAACT +
Preference number: 4 (lower is better)
Translates to: QLDECLQCEHSWLASTQSWAQTS*SWPMLT
Trigger: AGTTAGCATTGGCCACGAGCATGAAGTCTGAGCCCA...GCTCTGAGTGCTAGCTAGCCAGCTGTGTTCACACTGTAAACATTCATCAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367535.8
ENST00000367536.5
CDS-3UTR GCA 90 bp AAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTGCTGGGATGTCGGACTaGGGAGAGCTTTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: KQEYLYLLLGPGLGCLVFAGMSD*GELSSW
Trigger: CCAGGAGGAAAGCTCTCCGCAGTCCGACATCCCAGC...AAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp CCAATTACAGTAATGGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGGGGCACCAGCTCATTaGTGTCCCGAGGCCGATAGC +
Preference number: 4 (lower is better)
Translates to: PITVMVQKQEYLYLLLGPGAPAH*CPEADS
Trigger: GCTATCGGCCTCGGGACAGCAATGAGCTGGTGCCCC...AGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACCATTACTGTAATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp GGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTCCCAGGCATCCTTCATaGTGTCTTCTGAAAGGGGCA +
Preference number: 4 (lower is better)
Translates to: GSETGIFVLTPWAWTWVSPRHPS*CLLKGA
Trigger: TGCCCCTTTCAGAAGACAGCATGAAGGATGCCTGGG...AGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp AAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCCCTCATAACTGAAGAGTaGCTCCACTTGGCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: KKQDQYLEDSLVPFPDTSLITEE*LHLAAF
Trigger: AAAGGCAGCCAAGTGGAGGCACTCTTCAGTTATGAG...GGAAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp GTAATGGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGCCCACCTTCCCTTTaGACTCCCCTTCCAGCCATT +
Preference number: 4 (lower is better)
Translates to: VMVQKQEYLYLLLGPGLGCPPSL*TPLPAI
Trigger: AATGGCTGGAAGGGGAGTGCAAAGGGAAGGTGGGCA...CCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACCATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp TCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCCATCCACTTTTCGGCTCATATAGCTTCTaGTTCTCACAGGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: SVPGRLSRALSRHFHPLFGSYSF*FSQANS
Trigger: GCTGTTTGCCTGTGAGAAGCAGAAGCTATATGAGCC...GAAAAGTGGATGGAAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413720.5
CDS-3UTR CCA 90 bp GCACTCAGAGCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACTTCATGCTCGTaGCCAATGCTAACTGTTCTT +
Preference number: 4 (lower is better)
Translates to: ALRARNRISTWKTLSCPFQTSCS*PMLTVL
Trigger: AAGAACAGTTAGCATTGGCCACGAGCATGAAGTCTG...GAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGCTCTGAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367535.8
ENST00000367536.5
CDS-3UTR CCA 90 bp TCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCCATCCACTTTTCTCGCCTTGTCGATTTTaGAATGTCTGGGCTCAGACT +
Preference number: 4 (lower is better)
Translates to: SVPGRLSRALSRHFHPLFSPCRF*NVWAQT
Trigger: AGTCTGAGCCCAGACATTCCAAAATCGACAAGGCGA...GAAAAGTGGATGGAAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367535.8
ENST00000367536.5
CDS-3UTR CCA 90 bp TCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCCATCCACTTTTCCACTTGTCTCTCATTTaGTCGAAACAGCTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: SVPGRLSRALSRHFHPLFHLSLI*SKQLAH
Trigger: GTGGGCAAGCTGTTTCGACCAAATGAGAGACAAGTG...GAAAAGTGGATGGAAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
CDS-3UTR CCA 90 bp CAGCTTGATGAATGTTTACAGTGTGAACACAGCTGGCTAGCTAGCACTCAGAGCCTAGGTAATCCTTCTTaGCCAGCTGAGCCACTTGTC +
Preference number: 4 (lower is better)
Translates to: QLDECLQCEHSWLASTQSLGNPS*PAEPLV
Trigger: GACAAGTGGCTCAGCTGGCCAAGAAGGATTACCTAG...GCTCTGAGTGCTAGCTAGCCAGCTGTGTTCACACTGTAAACATTCATCAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
CDS-3UTR CCA 90 bp TGCCCCAGGAAATCATCCTGGGTACTCACATCATTGTCTAGTAGGTTAAATTTTGGTTTTCGGTCTGGGTaGAGGCTCAGCTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: CPRKSSWVLTSLSSRLNFGFRSG*RLSCLW
Trigger: CCACAGGCAGCTGAGCCTCCACCCAGACCGAAAACC...AAAATTTAACCTACTAGACAATGATGTGAGTACCCAGGATGATTTCCTGGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp GGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTGTAAGGGAACTAGGAGGAGCTaGGATGTCGGACTGCGGAGA +
Preference number: 4 (lower is better)
Translates to: GIFVLTPWAWTWVSCFCKGTRRS*DVGLRR
Trigger: TCTCCGCAGTCCGACATCCCAGCTCCTCCTAGTTCC...CTTACAAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp AAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCCAAACTCCAGGTCCTCTaGTTGGGTAGCCTCATAACT +
Preference number: 4 (lower is better)
Translates to: KKQDQYLEDSLVPFPDTSKLQVL*LGSLIT
Trigger: AGTTATGAGGCTACCCAACCAGAGGACCTGGAGTTT...GGAAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp TCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCCATCCACTTTTCAAACTCCAGGTCCTCTaGTTGGGTAGCCTCATAACT +
Preference number: 4 (lower is better)
Translates to: SVPGRLSRALSRHFHPLFKLQVL*LGSLIT
Trigger: AGTTATGAGGCTACCCAACCAGAGGACCTGGAGTTT...GAAAAGTGGATGGAAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp AAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCCCTTACTCCTTGGGCCTaGACTTGGGTGTCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: KKQDQYLEDSLVPFPDTSLTPWA*TWVSCF
Trigger: AAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAG...GGAAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp GTAATGGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGACATGCAGCCAATGTTaGAGCAAATCCGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: VMVQKQEYLYLLLGPGLGTCSQC*SKSGSG
Trigger: CCCACTCCCGGATTTGCTTCAACATTGGCTGCATGT...CCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACCATTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp CAGCTTGATGAATGTTTACAGTGTGAACACAGCTGGCTAGCTAGCACTCAGAGCTGGTTCCCTCGAAGCTaGATCAAGGCTTCTTTAAGG +
Preference number: 4 (lower is better)
Translates to: QLDECLQCEHSWLASTQSWFPRS*IKASLR
Trigger: CCTTAAAGAAGCCTTGATTCAGCTTCGAGGGAACCA...GCTCTGAGTGCTAGCTAGCCAGCTGTGTTCACACTGTAAACATTCATCAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp GGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTGTAAGCACAGGCAAACAGCTTaGACTGGAGCCCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: GIFVLTPWAWTWVSCFCKHRQTA*TGAPGS
Trigger: AGATCCTGGGGCTCCAGTTCAAGCTGTTTGCCTGTG...CTTACAAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp GGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTCCTTCTTGGCCAGCTaGGCCACTTGTCTCTCATTT +
Preference number: 4 (lower is better)
Translates to: GSETGIFVLTPWAWTWVSSFLAS*ATCLSF
Trigger: AAATGAGAGACAAGTGGCTCAGCTGGCCAAGAAGGA...AGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
CDS-3UTR TCA 90 bp CAGCAGAAGGGTGCTAAATCTTACAAACAAGTAATAGGGCTTCATTTTCTTCAGCCAAATAGCACACGGTaGGCCTCCCCTTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: QQKGAKSYKQVIGLHFLQPNSTR*ASPSRA
Trigger: GGCTCTGGAAGGGGAGGCTCACCGTGTGCTATTTGG...CTGAAGAAAATGAAGCCCTATTACTTGTTTGTAAGATTTAGCACCCTTCTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp TCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCCATCCACTTTTCCTGCCTTTCTTAAGCTaGGGTTCTGTTGTCTGGTTA +
Preference number: 4 (lower is better)
Translates to: SVPGRLSRALSRHFHPLFLPFLS*GSVVWL
Trigger: TAACCAGACAACAGAACCTCAGCTTAAGAAAGGCAG...GAAAAGTGGATGGAAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp AAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTACTTTCTGGGCCAGATaGGTAGAATGGGGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: KQEYLYLLLGPGLGCLVFTFWAR*VEWGPA
Trigger: GGCTGGGCCCCATTCTACTCATCTGGCCCAGAAAGT...AAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp GGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTTGATCCACCACAGATaGCACGACCTCACAGGCAAA +
Preference number: 4 (lower is better)
Translates to: GSETGIFVLTPWAWTWVSLIHHR*HDLTGK
Trigger: TTTGCCTGTGAGGTCGTGGCATCTGTGGTGGATCAA...AGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418089.5
CDS-3UTR CCA 90 bp CCAATTACAGTAATGGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGGTTTTCGGTCTGGGTaGAGGCTCAGCTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: PITVMVQKQEYLYLLLGPGFRSG*RLSCLW
Trigger: CCACAGGCAGCTGAGCCTCCACCCAGACCGAAAACC...AGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACCATTACTGTAATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp CAGCTTGATGAATGTTTACAGTGTGAACACAGCTGGCTAGCTAGCACTCAGAGCAAAGACAATGTTCCCTaGCATGACCTGGAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: QLDECLQCEHSWLASTQSKDNVP*HDLELF
Trigger: GAAGAGCTCCAGGTCATGCCAGGGAACATTGTCTTT...GCTCTGAGTGCTAGCTAGCCAGCTGTGTTCACACTGTAAACATTCATCAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp CAGCTTGATGAATGTTTACAGTGTGAACACAGCTGGCTAGCTAGCACTCAGAGCTCATCTGGAAAGCCTTaGTCACCCACTGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: QLDECLQCEHSWLASTQSSSGKP*SPTVFS
Trigger: TGAGAACACAGTGGGTGACCAAGGCTTTCCAGATGA...GCTCTGAGTGCTAGCTAGCCAGCTGTGTTCACACTGTAAACATTCATCAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp GGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTTCCTTGGGTTCATCTaGAAAGCCTTGGTCACCCAC +
Preference number: 4 (lower is better)
Translates to: GSETGIFVLTPWAWTWVSFLGFI*KALVTH
Trigger: GTGGGTGACCAAGGCTTTCCAGATGAACCCAAGGAA...AGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp TCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCCATCCACTTTTCCCCAGGAAATCATCCTaGGTACTCACATCATTGTCT +
Preference number: 4 (lower is better)
Translates to: SVPGRLSRALSRHFHPLFPRKSS*VLTSLS
Trigger: AGACAATGATGTGAGTACCCAGGATGATTTCCTGGG...GAAAAGTGGATGGAAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp AAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCCCCCAGGAAATCATCCTaGGTACTCACATCATTGTCT +
Preference number: 4 (lower is better)
Translates to: KKQDQYLEDSLVPFPDTSPRKSS*VLTSLS
Trigger: AGACAATGATGTGAGTACCCAGGATGATTTCCTGGG...GGAAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp GTAATGGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGCAGTGTGAACACAGCTaGCTAGCTAGCACTCAGAGC +
Preference number: 4 (lower is better)
Translates to: VMVQKQEYLYLLLGPGLGQCEHS*LASTQS
Trigger: GCTCTGAGTGCTAGCTAGCCAGCTGTGTTCACACTG...CCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACCATTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp GCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTAATGTCCCCACCTTTTaGCAACTGACTCATAACCCT +
Preference number: 4 (lower is better)
Translates to: ARNRISTWKTLSCPFQTLNVPTF*QLTHNP
Trigger: AGGGTTATGAGTCAGTTGCCAAAAGGTGGGGACATT...AAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp GGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTGTAAGACATGCAGCCAATGTTaGAGCAAATCCGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: GIFVLTPWAWTWVSCFCKTCSQC*SKSGSG
Trigger: CCCACTCCCGGATTTGCTTCAACATTGGCTGCATGT...CTTACAAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp TGCCCCAGGAAATCATCCTGGGTACTCACATCATTGTCTAGTAGGTTAAATTTTCACAGGCAAACAGCTTaGACTGGAGCCCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: CPRKSSWVLTSLSSRLNFHRQTA*TGAPGS
Trigger: AGATCCTGGGGCTCCAGTTCAAGCTGTTTGCCTGTG...AAAATTTAACCTACTAGACAATGATGTGAGTACCCAGGATGATTTCCTGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp TCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCCATCCACTTTTCCTCATAACCCTACCATaGGAGAGAAAAGGAAAGAAG +
Preference number: 4 (lower is better)
Translates to: SVPGRLSRALSRHFHPLFLITLP*ERKGKK
Trigger: CTTCTTTCCTTTTCTCTCTCATGGTAGGGTTATGAG...GAAAAGTGGATGGAAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp TGCCCCAGGAAATCATCCTGGGTACTCACATCATTGTCTAGTAGGTTAAATTTTGTCCTTCTTGTCCGCTaGCAGCACCCCTTCATTCCA +
Preference number: 4 (lower is better)
Translates to: CPRKSSWVLTSLSSRLNFVLLVR*QHPFIP
Trigger: TGGAATGAAGGGGTGCTGGCAGCGGACAAGAAGGAC...AAAATTTAACCTACTAGACAATGATGTGAGTACCCAGGATGATTTCCTGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp CAGCAGAAGGGTGCTAAATCTTACAAACAAGTAATAGGGCTTCATTTTCTTCAGTTGATCCACCACAGATaGCACGACCGTCGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: QQKGAKSYKQVIGLHFLQLIHHR*HDRRLA
Trigger: GGCAAGGCGACGGTCGTGGCATCTGTGGTGGATCAA...CTGAAGAAAATGAAGCCCTATTACTTGTTTGTAAGATTTAGCACCCTTCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
CDS-3UTR CCA 90 bp CAGCTTGATGAATGTTTACAGTGTGAACACAGCTGGCTAGCTAGCACTCAGAGCCAGACTTCATGCTCGTaGCCAATGCTAACTGTTCTT +
Preference number: 4 (lower is better)
Translates to: QLDECLQCEHSWLASTQSQTSCS*PMLTVL
Trigger: AAGAACAGTTAGCATTGGCCACGAGCATGAAGTCTG...GCTCTGAGTGCTAGCTAGCCAGCTGTGTTCACACTGTAAACATTCATCAAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367535.8
ENST00000367536.5
CDS-3UTR CCA 90 bp AAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTAGCCCTGAAGATCTCTaGGGTTTTCGGTCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: KQEYLYLLLGPGLGCLVFSPEDL*GFRSGW
Trigger: CCACCCAGACCGAAAACCCCAGAGATCTTCAGGGCT...AAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp CAGCAGAAGGGTGCTAAATCTTACAAACAAGTAATAGGGCTTCATTTTCTTCAGGGAACTAGGAGGAGCTaGGATGTCGGACTGCGGAGA +
Preference number: 4 (lower is better)
Translates to: QQKGAKSYKQVIGLHFLQGTRRS*DVGLRR
Trigger: TCTCCGCAGTCCGACATCCCAGCTCCTCCTAGTTCC...CTGAAGAAAATGAAGCCCTATTACTTGTTTGTAAGATTTAGCACCCTTCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp GGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTCATCTGGAAAGCCTTaGTCACCCACTGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: GSETGIFVLTPWAWTWVSSSGKP*SPTVFS
Trigger: TGAGAACACAGTGGGTGACCAAGGCTTTCCAGATGA...AGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp GTAATGGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTTCCTTGGGTTCATCTaGAAAGCCTTGGTCACCCAC +
Preference number: 4 (lower is better)
Translates to: VMVQKQEYLYLLLGPGLGFLGFI*KALVTH
Trigger: GTGGGTGACCAAGGCTTTCCAGATGAACCCAAGGAA...CCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACCATTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp CAGCTTGATGAATGTTTACAGTGTGAACACAGCTGGCTAGCTAGCACTCAGAGCAATGTCCCCACCTTTTaGCAACTGACTCATAACCCT +
Preference number: 4 (lower is better)
Translates to: QLDECLQCEHSWLASTQSNVPTF*QLTHNP
Trigger: AGGGTTATGAGTCAGTTGCCAAAAGGTGGGGACATT...GCTCTGAGTGCTAGCTAGCCAGCTGTGTTCACACTGTAAACATTCATCAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp AAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTCCAGAGAAACTGTCTTaGTCCACCACAGATGCCACG +
Preference number: 4 (lower is better)
Translates to: KQEYLYLLLGPGLGCLVFPEKLS*STTDAT
Trigger: CGTGGCATCTGTGGTGGATCAAGACAGTTTCTCTGG...AAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp GGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTCTGCCTTTCTTAAGCTaGGGTTCTGTTGTCTGGTTA +
Preference number: 4 (lower is better)
Translates to: GSETGIFVLTPWAWTWVSLPFLS*GSVVWL
Trigger: TAACCAGACAACAGAACCTCAGCTTAAGAAAGGCAG...AGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp CCAATTACAGTAATGGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGTCCTTCTTGTCCGCTaGCAGCACCCCTTCATTCCA +
Preference number: 4 (lower is better)
Translates to: PITVMVQKQEYLYLLLGPVLLVR*QHPFIP
Trigger: TGGAATGAAGGGGTGCTGGCAGCGGACAAGAAGGAC...AGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACCATTACTGTAATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp CAGCAGAAGGGTGCTAAATCTTACAAACAAGTAATAGGGCTTCATTTTCTTCAGCCACGACCGTCGCCTTaGCTAGGTAATCCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: QQKGAKSYKQVIGLHFLQPRPSP*LGNPSW
Trigger: CCAAGAAGGATTACCTAGGCAAGGCGACGGTCGTGG...CTGAAGAAAATGAAGCCCTATTACTTGTTTGTAAGATTTAGCACCCTTCTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
CDS-3UTR GCA 90 bp GGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTGTAAGCTGGTTCAAGGTAGTTaGAGGGAACAAGCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: GIFVLTPWAWTWVSCFCKLVQGS*REQAPS
Trigger: AGAAGGGGCTTGTTCCCTGCAACTACCTTGAACCAG...CTTACAAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp CAGCAGAAGGGTGCTAAATCTTACAAACAAGTAATAGGGCTTCATTTTCTTCAGTGCCCACCTTCCCTTTaGACTCCCCTTCCAGCCATT +
Preference number: 4 (lower is better)
Translates to: QQKGAKSYKQVIGLHFLQCPPSL*TPLPAI
Trigger: AATGGCTGGAAGGGGAGTGCAAAGGGAAGGTGGGCA...CTGAAGAAAATGAAGCCCTATTACTTGTTTGTAAGATTTAGCACCCTTCTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp TCTCTCGTGCCCTTTCCAGACACTTCCATCCACTTTTCCTCTCCCCTAACTCCTTTCCAAATCTGTAGTTaGGCAGTCTTCAACAAAAAC +
Preference number: 4 (lower is better)
Translates to: SLVPFPDTSIHFSSPLTPFQICS*AVFNKN
Trigger: GTTTTTGTTGAAGACTGCGCAACTACAGATTTGGAA...AGGAGTTAGGGGAGAGGAAAAGTGGATGGAAGTGTCTGGAAAGGGCACGAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp GGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTCTCAGTGTTGCAAATaGATCAGGAAATGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: GSETGIFVLTPWAWTWVSSQCCK*IRKCPH
Trigger: GTGGGGACATTTCCTGATGCATTTGCAACACTGAGA...AGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp GTAATGGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGCACTTGTCTCTCATTTaGTCGAAACAGCTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: VMVQKQEYLYLLLGPGLGHLSLI*SKQLAH
Trigger: GTGGGCAAGCTGTTTCGACCAAATGAGAGACAAGTG...CCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACCATTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
CDS-3UTR CCA 90 bp GTAATGGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTCATCTGGAAAGCCTTaGTCACCCACTGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: VMVQKQEYLYLLLGPGLGSSGKP*SPTVFS
Trigger: TGAGAACACAGTGGGTGACCAAGGCTTTCCAGATGA...CCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACCATTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp AAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCCCTTTTTCACTTTCCTTaGGTTCATCTGGAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: KKQDQYLEDSLVPFPDTSLFHFP*VHLESL
Trigger: AAGGCTTTCCAGATGAACCCAAGGAAAGTGAAAAAG...GGAAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp GGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTGTAAGTGGTTCCCTCGAAGCTaGATCAAGGCTTCTTTAAGG +
Preference number: 4 (lower is better)
Translates to: GIFVLTPWAWTWVSCFCKWFPRS*IKASLR
Trigger: CCTTAAAGAAGCCTTGATTCAGCTTCGAGGGAACCA...CTTACAAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp TGCCCCAGGAAATCATCCTGGGTACTCACATCATTGTCTAGTAGGTTAAATTTTACTTGTAGTGCACCTTaGGTGTGTAGGGCATGGGAA +
Preference number: 4 (lower is better)
Translates to: CPRKSSWVLTSLSSRLNFTCSAP*VCRAWE
Trigger: TTCCCATGCCCTACACACTCAAGGTGCACTACAAGT...AAAATTTAACCTACTAGACAATGATGTGAGTACCCAGGATGATTTCCTGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp TGCCCCAGGAAATCATCCTGGGTACTCACATCATTGTCTAGTAGGTTAAATTTTCTTCATGCTGTCTTCTaGAAGGGGCACCAGCTCATT +
Preference number: 4 (lower is better)
Translates to: CPRKSSWVLTSLSSRLNFLHAVF*KGHQLI
Trigger: AATGAGCTGGTGCCCCTTTCAGAAGACAGCATGAAG...AAAATTTAACCTACTAGACAATGATGTGAGTACCCAGGATGATTTCCTGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp GGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTGTAAGCTCATAACTGAAGAGTaGCTCCACTTGGCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: GIFVLTPWAWTWVSCFCKLITEE*LHLAAF
Trigger: AAAGGCAGCCAAGTGGAGGCACTCTTCAGTTATGAG...CTTACAAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp GCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTTTCCAAATCTGTAGTTaGGCAGTCTTCAACAAAAAC +
Preference number: 4 (lower is better)
Translates to: ARNRISTWKTLSCPFQTLFQICS*AVFNKN
Trigger: GTTTTTGTTGAAGACTGCGCAACTACAGATTTGGAA...AAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp GTAATGGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTCTCAGTGTTGCAAATaGATCAGGAAATGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: VMVQKQEYLYLLLGPGLGSQCCK*IRKCPH
Trigger: GTGGGGACATTTCCTGATGCATTTGCAACACTGAGA...CCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACCATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp GGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTGTAAGCGATTTTGGAATGTCTaGGCTCAGACTTCATGCTCG +
Preference number: 4 (lower is better)
Translates to: GIFVLTPWAWTWVSCFCKRFWNV*AQTSCS
Trigger: CGAGCATGAAGTCTGAGCCCAGACATTCCAAAATCG...CTTACAAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367535.8
ENST00000367536.5
CDS-3UTR CCA 90 bp AAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTCTAGGTAATCCTTCTTaGCCAGCTGAGCCACTTGTC +
Preference number: 4 (lower is better)
Translates to: KQEYLYLLLGPGLGCLVFLGNPS*PAEPLV
Trigger: GACAAGTGGCTCAGCTGGCCAAGAAGGATTACCTAG...AAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
CDS-3UTR CCA 90 bp GGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTGTAAGAAAGACAATGTTCCCTaGCATGACCTGGAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: GIFVLTPWAWTWVSCFCKKDNVP*HDLELF
Trigger: GAAGAGCTCCAGGTCATGCCAGGGAACATTGTCTTT...CTTACAAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp CAGCAGAAGGGTGCTAAATCTTACAAACAAGTAATAGGGCTTCATTTTCTTCAGCAGTGTGAACACAGCTaGCTAGCTAGCACTCAGAGC +
Preference number: 4 (lower is better)
Translates to: QQKGAKSYKQVIGLHFLQQCEHS*LASTQS
Trigger: GCTCTGAGTGCTAGCTAGCCAGCTGTGTTCACACTG...CTGAAGAAAATGAAGCCCTATTACTTGTTTGTAAGATTTAGCACCCTTCTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp GGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTGTAAGCCTTGGGCCTGGACTTaGGTGTCTTGTTTTTGTAAG +
Preference number: 4 (lower is better)
Translates to: GIFVLTPWAWTWVSCFCKPWAWT*VSCFCK
Trigger: CTTACAAAAACAAGACACCCAAGTCCAGGCCCAAGG...CTTACAAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp CCAATTACAGTAATGGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTACTTGTAGTGCACCTTaGGTGTGTAGGGCATGGGAA +
Preference number: 4 (lower is better)
Translates to: PITVMVQKQEYLYLLLGPTCSAP*VCRAWE
Trigger: TTCCCATGCCCTACACACTCAAGGTGCACTACAAGT...AGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACCATTACTGTAATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp CCAATTACAGTAATGGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTCGGGCTGAGTCTTCATaGCTACCGTGTACTTGTAGT +
Preference number: 4 (lower is better)
Translates to: PITVMVQKQEYLYLLLGPRAESS*LPCTCS
Trigger: ACTACAAGTACACGGTAGTCATGAAGACTCAGCCCG...AGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACCATTACTGTAATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp CAGCAGAAGGGTGCTAAATCTTACAAACAAGTAATAGGGCTTCATTTTCTTCAGCTTCATGCTGTCTTCTaGAAGGGGCACCAGCTCATT +
Preference number: 4 (lower is better)
Translates to: QQKGAKSYKQVIGLHFLQLHAVF*KGHQLI
Trigger: AATGAGCTGGTGCCCCTTTCAGAAGACAGCATGAAG...CTGAAGAAAATGAAGCCCTATTACTTGTTTGTAAGATTTAGCACCCTTCTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp CCAATTACAGTAATGGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTCTTCATGCTGTCTTCTaGAAGGGGCACCAGCTCATT +
Preference number: 4 (lower is better)
Translates to: PITVMVQKQEYLYLLLGPLHAVF*KGHQLI
Trigger: AATGAGCTGGTGCCCCTTTCAGAAGACAGCATGAAG...AGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACCATTACTGTAATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp AAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTATTATATCCCCTTCCTaGAACTCCAGGTCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: KQEYLYLLLGPGLGCLVFIISPS*NSRSSG
Trigger: ACCAGAGGACCTGGAGTTTCAGGAAGGGGATATAAT...AAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp GTAATGGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGCTCATAACCCTACCATaGGAGAGAAAAGGAAAGAAG +
Preference number: 4 (lower is better)
Translates to: VMVQKQEYLYLLLGPGLGLITLP*ERKGKK
Trigger: CTTCTTTCCTTTTCTCTCTCATGGTAGGGTTATGAG...CCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACCATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp GGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTGTAAGGGTAAAGGCCTTCTCTaGTTCAGTCATGTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: GIFVLTPWAWTWVSCFCKGKGLL*FSHVLQ
Trigger: CTGAAGAACATGACTGAAGCAGAGAAGGCCTTTACC...CTTACAAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp CCAATTACAGTAATGGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTCTGGTTCAAGGTAGTTaGAGGGAACAAGCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PITVMVQKQEYLYLLLGPLVQGS*REQAPS
Trigger: AGAAGGGGCTTGTTCCCTGCAACTACCTTGAACCAG...AGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACCATTACTGTAATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp TGCCCCAGGAAATCATCCTGGGTACTCACATCATTGTCTAGTAGGTTAAATTTTAAAGACAATGTTCCCTaGCATGACCTGGAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: CPRKSSWVLTSLSSRLNFKDNVP*HDLELF
Trigger: GAAGAGCTCCAGGTCATGCCAGGGAACATTGTCTTT...AAAATTTAACCTACTAGACAATGATGTGAGTACCCAGGATGATTTCCTGGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp CAGCAGAAGGGTGCTAAATCTTACAAACAAGTAATAGGGCTTCATTTTCTTCAGTTCCTTGGGTTCATCTaGAAAGCCTTGGTCACCCAC +
Preference number: 4 (lower is better)
Translates to: QQKGAKSYKQVIGLHFLQFLGFI*KALVTH
Trigger: GTGGGTGACCAAGGCTTTCCAGATGAACCCAAGGAA...CTGAAGAAAATGAAGCCCTATTACTTGTTTGTAAGATTTAGCACCCTTCTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp GGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTGTAAGCCCAGGAAATCATCCTaGGTACTCACATCATTGTCT +
Preference number: 4 (lower is better)
Translates to: GIFVLTPWAWTWVSCFCKPRKSS*VLTSLS
Trigger: AGACAATGATGTGAGTACCCAGGATGATTTCCTGGG...CTTACAAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp AAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTCTTACTCCTTGGGCCTaGACTTGGGTGTCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: KQEYLYLLLGPGLGCLVFLTPWA*TWVSCF
Trigger: AAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAG...AAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp AAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTTTTGTACTTACTCCTTaGGCCTGGACTTGGGTGTCT +
Preference number: 4 (lower is better)
Translates to: KQEYLYLLLGPGLGCLVFFVLTP*AWTWVS
Trigger: AGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAA...AAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTT
43% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp CAGCAGAAGGGTGCTAAATCTTACAAACAAGTAATAGGGCTTCATTTTCTTCAGTGGTTCCCTCGAAGCTaGATCAAGGCTTCTTTAAGG +
Preference number: 4 (lower is better)
Translates to: QQKGAKSYKQVIGLHFLQWFPRS*IKASLR
Trigger: CCTTAAAGAAGCCTTGATTCAGCTTCGAGGGAACCA...CTGAAGAAAATGAAGCCCTATTACTTGTTTGTAAGATTTAGCACCCTTCTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp CCAATTACAGTAATGGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTTGGTTCCCTCGAAGCTaGATCAAGGCTTCTTTAAGG +
Preference number: 4 (lower is better)
Translates to: PITVMVQKQEYLYLLLGPWFPRS*IKASLR
Trigger: CCTTAAAGAAGCCTTGATTCAGCTTCGAGGGAACCA...AGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACCATTACTGTAATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR TCA 90 bp CAGCAGAAGGGTGCTAAATCTTACAAACAAGTAATAGGGCTTCATTTTCTTCAGATTATATCCCCTTCCTaGAACTCCAGGTCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: QQKGAKSYKQVIGLHFLQIISPS*NSRSSG
Trigger: ACCAGAGGACCTGGAGTTTCAGGAAGGGGATATAAT...CTGAAGAAAATGAAGCCCTATTACTTGTTTGTAAGATTTAGCACCCTTCTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR GCA 90 bp CAGCAGAAGGGTGCTAAATCTTACAAACAAGTAATAGGGCTTCATTTTCTTCAGGGCTCATATAGCTTCTaGTTCCAGACACACTCCATC +
Preference number: 4 (lower is better)
Translates to: QQKGAKSYKQVIGLHFLQGSYSF*FQTHSI
Trigger: GATGGAGTGTGTCTGGAAGCAGAAGCTATATGAGCC...CTGAAGAAAATGAAGCCCTATTACTTGTTTGTAAGATTTAGCACCCTTCTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367535.8
ENST00000367536.5
CDS-3UTR GCA 90 bp GGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTTCCAAATCTGTAGTTaGGCAGTCTTCAACAAAAAC +
Preference number: 4 (lower is better)
Translates to: GSETGIFVLTPWAWTWVSFQICS*AVFNKN
Trigger: GTTTTTGTTGAAGACTGCGCAACTACAGATTTGGAA...AGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp CCAATTACAGTAATGGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTTCGCCTTGTCGATTTTaGAATGTCTGGGCTCAGACT +
Preference number: 4 (lower is better)
Translates to: PITVMVQKQEYLYLLLGPSPCRF*NVWAQT
Trigger: AGTCTGAGCCCAGACATTCCAAAATCGACAAGGCGA...AGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACCATTACTGTAATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367535.8
ENST00000367536.5
CDS-3UTR CCA 90 bp CAGCAGAAGGGTGCTAAATCTTACAAACAAGTAATAGGGCTTCATTTTCTTCAGCACTTGTCTCTCATTTaGTCGAAACAGCTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: QQKGAKSYKQVIGLHFLQHLSLI*SKQLAH
Trigger: GTGGGCAAGCTGTTTCGACCAAATGAGAGACAAGTG...CTGAAGAAAATGAAGCCCTATTACTTGTTTGTAAGATTTAGCACCCTTCTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
CDS-3UTR CCA 90 bp GTAATGGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGCTTTTTCACTTTCCTTaGGTTCATCTGGAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: VMVQKQEYLYLLLGPGLGLFHFP*VHLESL
Trigger: AAGGCTTTCCAGATGAACCCAAGGAAAGTGAAAAAG...CCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACCATTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp CAGCAGAAGGGTGCTAAATCTTACAAACAAGTAATAGGGCTTCATTTTCTTCAGCCTTGGGCCTGGACTTaGGTGTCTTGTTTTTGTAAG +
Preference number: 4 (lower is better)
Translates to: QQKGAKSYKQVIGLHFLQPWAWT*VSCFCK
Trigger: CTTACAAAAACAAGACACCCAAGTCCAGGCCCAAGG...CTGAAGAAAATGAAGCCCTATTACTTGTTTGTAAGATTTAGCACCCTTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp CAGCAGAAGGGTGCTAAATCTTACAAACAAGTAATAGGGCTTCATTTTCTTCAGCTTACTCCTTGGGCCTaGACTTGGGTGTCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: QQKGAKSYKQVIGLHFLQLTPWA*TWVSCF
Trigger: AAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAG...CTGAAGAAAATGAAGCCCTATTACTTGTTTGTAAGATTTAGCACCCTTCTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp CCAATTACAGTAATGGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTTTTGTACTTACTCCTTaGGCCTGGACTTGGGTGTCT +
Preference number: 4 (lower is better)
Translates to: PITVMVQKQEYLYLLLGPFVLTP*AWTWVS
Trigger: AGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAA...AGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACCATTACTGTAATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp AAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTCTTCAACAAAAACTTTaGGGAAAATGCCCACCTTCC +
Preference number: 4 (lower is better)
Translates to: KQEYLYLLLGPGLGCLVFLQQKL*GKCPPS
Trigger: GGAAGGTGGGCATTTTCCCCAAAGTTTTTGTTGAAG...AAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp TGCCCCAGGAAATCATCCTGGGTACTCACATCATTGTCTAGTAGGTTAAATTTTCTTTTTCACTTTCCTTaGGTTCATCTGGAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: CPRKSSWVLTSLSSRLNFLFHFP*VHLESL
Trigger: AAGGCTTTCCAGATGAACCCAAGGAAAGTGAAAAAG...AAAATTTAACCTACTAGACAATGATGTGAGTACCCAGGATGATTTCCTGGGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp AAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTCTTTTTCACTTTCCTTaGGTTCATCTGGAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: KQEYLYLLLGPGLGCLVFLFHFP*VHLESL
Trigger: AAGGCTTTCCAGATGAACCCAAGGAAAGTGAAAAAG...AAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CCA 90 bp CCAATTACAGTAATGGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTCTTCAACAAAAACTTTaGGGAAAATGCCCACCTTCC +
Preference number: 4 (lower is better)
Translates to: PITVMVQKQEYLYLLLGPLQQKL*GKCPPS
Trigger: GGAAGGTGGGCATTTTCCCCAAAGTTTTTGTTGAAG...AGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACCATTACTGTAATTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS GCA 90 bp GGCACTGAAGGCATCCAGGGCTCCCTTCCAGTCCTTCTTGTCCGCTaGCAGCACCCCTTCATTCCAGAGGCTGATGGCCTCCACCAGGGA +
Preference number: 5 (lower is better)
Translates to: GTEGIQGSLPVLLVR*QHPFIPEADGLHQG
Trigger: TCCCTGGTGGAGGCCATCAGCCTCTGGAATGAAGGGGTGCTGGCAGCGGACAAGAAGGACTGGAAGGGAGCCCTGGATGCCTTCAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS CCA 90 bp GCTTTCCTCCTGGGGCTGCTGCTGAGGGTGGATCCGCAGCTCAACTaGTTCAAGGTAGTTGCAGGGAACAAGCCCCTTCTGCCCGTTGAA +
Preference number: 5 (lower is better)
Translates to: AFLLGLLLRVDPQLN*FKVVAGNKPLLPVE
Trigger: TTCAACGGGCAGAAGGGGCTTGTTCCCTGCAACTACCTTGAACCAGTTGAGCTGCGGATCCACCCTCAGCAGCAGCCCCAGGAGGAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
ENST00000419402.1
CDS CCA 90 bp TTCAGGATAGTGTACATGCAGCCAATGTTGAAGCAAATCCGGGAGTaGGGGTCCTGGACGGCACTGAAGGCATCCAGGGCTCCCTTCCAG +
Preference number: 5 (lower is better)
Translates to: FRIVYMQPMLKQIRE*GSWTALKASRAPFQ
Trigger: CTGGAAGGGAGCCCTGGATGCCTTCAGTGCCGTCCAGGACCCCCACTCCCGGATTTGCTTCAACATTGGCTGCATGTACACTATCCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS CCA 90 bp CCACCACAGATGCCACGACCGTCGCCTTGCCTAGGTAATCCTTCTTaGCCAGCTGAGCCACTTGTCTCTCATTTGGTCGAAACAGCTTGC +
Preference number: 5 (lower is better)
Translates to: PPQMPRPSPCLGNPS*PAEPLVSHLVETAC
Trigger: GCAAGCTGTTTCGACCAAATGAGAGACAAGTGGCTCAGCTGGCCAAGAAGGATTACCTAGGCAAGGCGACGGTCGTGGCATCTGTGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
CDS-3UTR CAA 90 bp TCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCCATCCACTTTTCCCCTTCCAGTCCTTCTaGTCCGCTGCCAGCACCCCT +
Preference number: 5 (lower is better)
Translates to: SVPGRLSRALSRHFHPLFPFQSF*SAASTP
Trigger: AGGGGTGCTGGCAGCGGACAAGAAGGACTGGAAGGG...GAAAAGTGGATGGAAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS TCA 90 bp AGGGCTGCCTTAGTGGCCCCCAAGGTGTTCACTTTCTGGGCCAGATaGGTAGAATGGGGCCCAGCCTCCCTTAAGATAACTTCTCAGTGT +
Preference number: 5 (lower is better)
Translates to: RAALVAPKVFTFWAR*VEWGPASLKITSQC
Trigger: ACACTGAGAAGTTATCTTAAGGGAGGCTGGGCCCCATTCTACTCATCTGGCCCAGAAAGTGAACACCTTGGGGGCCACTAAGGCAGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp CAGCTTGATGAATGTTTACAGTGTGAACACAGCTGGCTAGCTAGCACTCAGAGCAGCCCCTTCTGCCCGTaGAACATGACCGTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: QLDECLQCEHSWLASTQSSPFCP*NMTVAQ
Trigger: CTGGGCCACGGTCATGTTCAACGGGCAGAAGGGGCT...GCTCTGAGTGCTAGCTAGCCAGCTGTGTTCACACTGTAAACATTCATCAAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp GCACTCAGAGCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCATGCCCACCTTCCCTTaGCACTCCCCTTCCAGCCAT +
Preference number: 5 (lower is better)
Translates to: ALRARNRISTWKTLSCPFMPTFP*HSPSSH
Trigger: ATGGCTGGAAGGGGAGTGCAAAGGGAAGGTGGGCAT...GAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGCTCTGAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp TCTCTCGTGCCCTTTCCAGACACTTCCATCCACTTTTCCTCTCCCCTAACTCCTTCACAGGCAAACAGCTaGAACTGGAGCCCCAGGATC +
Preference number: 5 (lower is better)
Translates to: SLVPFPDTSIHFSSPLTPSQANS*NWSPRI
Trigger: GATCCTGGGGCTCCAGTTCAAGCTGTTTGCCTGTGA...AGGAGTTAGGGGAGAGGAAAAGTGGATGGAAGTGTCTGGAAAGGGCACGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp AAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCCATGCCCACCTTCCCTTaGCACTCCCCTTCCAGCCAT +
Preference number: 5 (lower is better)
Translates to: KKQDQYLEDSLVPFPDTSMPTFP*HSPSSH
Trigger: ATGGCTGGAAGGGGAGTGCAAAGGGAAGGTGGGCAT...GGAAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp TCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCCATCCACTTTTCATGCCCACCTTCCCTTaGCACTCCCCTTCCAGCCAT +
Preference number: 5 (lower is better)
Translates to: SVPGRLSRALSRHFHPLFMPTFP*HSPSSH
Trigger: ATGGCTGGAAGGGGAGTGCAAAGGGAAGGTGGGCAT...GAAAAGTGGATGGAAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS GCA 90 bp TCTTGGCCAGCTGAGCCACTTGTCTCTCATTTGGTCGAAACAGCTTaGCCACAGGGATCACCACTGGCTCATATAGCTTCTGCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: SWPAEPLVSHLVETA*PQGSPLAHIASASR
Trigger: TCTGGAAGCAGAAGCTATATGAGCCAGTGGTGATCCCTGTGGGCAAGCTGTTTCGACCAAATGAGAGACAAGTGGCTCAGCTGGCCAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367535.8
ENST00000367536.5
CDS GCA 90 bp TCTTGGCCAGCTGAGCCACTTGTCTCTCATTTGGTCGAAACAGCTTaGCCACAGGGATCACCACTGGCTCATATAGCTTCTGCTTCTCAC +
Preference number: 5 (lower is better)
Translates to: SWPAEPLVSHLVETA*PQGSPLAHIASASH
Trigger: GTGAGAAGCAGAAGCTATATGAGCCAGTGGTGATCCCTGTGGGCAAGCTGTTTCGACCAAATGAGAGACAAGTGGCTCAGCTGGCCAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413720.5
CDS-3UTR CAA 90 bp GCACTCAGAGCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCGCCACTGCCAAGTGCTaGTCTCGGTTAATGCTTCTG +
Preference number: 5 (lower is better)
Translates to: ALRARNRISTWKTLSCPFATAKC*SRLMLL
Trigger: CAGAAGCATTAACCGAGACAAGCACTTGGCAGTGGC...GAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGCTCTGAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp TCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCCATCCACTTTTCTCACAGGCAAACAGCTaGAACTGGAGCCCCAGGATC +
Preference number: 5 (lower is better)
Translates to: SVPGRLSRALSRHFHPLFSQANS*NWSPRI
Trigger: GATCCTGGGGCTCCAGTTCAAGCTGTTTGCCTGTGA...GAAAAGTGGATGGAAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp AAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCCTCACAGGCAAACAGCTaGAACTGGAGCCCCAGGATC +
Preference number: 5 (lower is better)
Translates to: KKQDQYLEDSLVPFPDTSSQANS*NWSPRI
Trigger: GATCCTGGGGCTCCAGTTCAAGCTGTTTGCCTGTGA...GGAAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp CACTCAGAGCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCTTTGGTCGAAACAGCTaGCCCACAGGGATCACCACT +
Preference number: 5 (lower is better)
Translates to: HSEQETGSVPGRLSRALSFGRNS*PTGITT
Trigger: AGTGGTGATCCCTGTGGGCAAGCTGTTTCGACCAAA...GGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGCTCTGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
CDS-3UTR CAA 90 bp GCACTCAGAGCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCGGCCAGCTGAGCCACTaGTCTCTCATTTGGTCGAAA +
Preference number: 5 (lower is better)
Translates to: ALRARNRISTWKTLSCPFGQLSH*SLIWSK
Trigger: TTTCGACCAAATGAGAGACAAGTGGCTCAGCTGGCC...GAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGCTCTGAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
CDS-3UTR CAA 90 bp CACTCAGAGCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCGGCCAGCTGAGCCACTaGTCTCTCATTTGGTCGAAA +
Preference number: 5 (lower is better)
Translates to: HSEQETGSVPGRLSRALSGQLSH*SLIWSK
Trigger: TTTCGACCAAATGAGAGACAAGTGGCTCAGCTGGCC...GGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGCTCTGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
CDS GCA 90 bp CTGAAACTCCAGGTCCTCTGGTTGGGTAGCCTCATAACTGAAGAGTaGCTCCACTTGGCTGCCTTTCTTAAGCTGAGGTTCTGTTGTCTG +
Preference number: 5 (lower is better)
Translates to: LKLQVLWLGSLITEE*LHLAAFLKLRFCCL
Trigger: CAGACAACAGAACCTCAGCTTAAGAAAGGCAGCCAAGTGGAGGCACTCTTCAGTTATGAGGCTACCCAACCAGAGGACCTGGAGTTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp GGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTGTAAGCCCTTCCAGTCCTTCTaGTCCGCTGCCAGCACCCCT +
Preference number: 5 (lower is better)
Translates to: GIFVLTPWAWTWVSCFCKPFQSF*SAASTP
Trigger: AGGGGTGCTGGCAGCGGACAAGAAGGACTGGAAGGG...CTTACAAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp GCACTCAGAGCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCTACATGCAGCCAATGTaGAAGCAAATCCGGGAGTGG +
Preference number: 5 (lower is better)
Translates to: ALRARNRISTWKTLSCPFYMQPM*KQIREW
Trigger: CCACTCCCGGATTTGCTTCAACATTGGCTGCATGTA...GAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGCTCTGAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp CACTCAGAGCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCTACATGCAGCCAATGTaGAAGCAAATCCGGGAGTGG +
Preference number: 5 (lower is better)
Translates to: HSEQETGSVPGRLSRALSYMQPM*KQIREW
Trigger: CCACTCCCGGATTTGCTTCAACATTGGCTGCATGTA...GGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGCTCTGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp GCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTGCCACTGCCAAGTGCTaGTCTCGGTTAATGCTTCTG +
Preference number: 5 (lower is better)
Translates to: ARNRISTWKTLSCPFQTLATAKC*SRLMLL
Trigger: CAGAAGCATTAACCGAGACAAGCACTTGGCAGTGGC...AAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp GCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTGTAGAGCATCCCTCGTaGGAAGTAAGCCACTGCCAA +
Preference number: 5 (lower is better)
Translates to: ARNRISTWKTLSCPFQTLVEHPS*EVSHCQ
Trigger: TTGGCAGTGGCTTACTTCCAACGAGGGATGCTCTAC...AAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp CACTCAGAGCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCCCACTTGTCTCTCATTaGGTCGAAACAGCTTGCCCA +
Preference number: 5 (lower is better)
Translates to: HSEQETGSVPGRLSRALSPLVSH*VETACP
Trigger: TGGGCAAGCTGTTTCGACCAAATGAGAGACAAGTGG...GGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGCTCTGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
CDS-3UTR CAA 90 bp GCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTGGCCAGCTGAGCCACTaGTCTCTCATTTGGTCGAAA +
Preference number: 5 (lower is better)
Translates to: ARNRISTWKTLSCPFQTLGQLSH*SLIWSK
Trigger: TTTCGACCAAATGAGAGACAAGTGGCTCAGCTGGCC...AAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
CDS-3UTR CAA 90 bp TCTCTCGTGCCCTTTCCAGACACTTCCATCCACTTTTCCTCTCCCCTAACTCCTCCTGGAGCTCTTCTTTaGTCTCAGGCACAAACCCAA +
Preference number: 5 (lower is better)
Translates to: SLVPFPDTSIHFSSPLTPPGALL*SQAQTQ
Trigger: TTGGGTTTGTGCCTGAGACAAAAGAAGAGCTCCAGG...AGGAGTTAGGGGAGAGGAAAAGTGGATGGAAGTGTCTGGAAAGGGCACGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp GGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTGTAAGAGCCCCTTCTGCCCGTaGAACATGACCGTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: GIFVLTPWAWTWVSCFCKSPFCP*NMTVAQ
Trigger: CTGGGCCACGGTCATGTTCAACGGGCAGAAGGGGCT...CTTACAAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp TCTCTCGTGCCCTTTCCAGACACTTCCATCCACTTTTCCTCTCCCCTAACTCCTTTCATCTGGAAAGCCTaGGTCACCCACTGTGTTCTC +
Preference number: 5 (lower is better)
Translates to: SLVPFPDTSIHFSSPLTPFIWKA*VTHCVL
Trigger: GAGAACACAGTGGGTGACCAAGGCTTTCCAGATGAA...AGGAGTTAGGGGAGAGGAAAAGTGGATGGAAGTGTCTGGAAAGGGCACGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp AAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCCCTCCAGGTCCTCTGGTaGGGTAGCCTCATAACTGAA +
Preference number: 5 (lower is better)
Translates to: KKQDQYLEDSLVPFPDTSLQVLW*GSLITE
Trigger: TTCAGTTATGAGGCTACCCAACCAGAGGACCTGGAG...GGAAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS CCA 90 bp TCTGCTTCCAGACACACTCCATCGCCTTGTCGATTTTGGAATGTCTaGGCTCAGACTTCATGCTCGTGGCCAATGCTAACTGTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: SASRHTPSPCRFWNV*AQTSCSWPMLTVLQ
Trigger: CTGAAGAACAGTTAGCATTGGCCACGAGCATGAAGTCTGAGCCCAGACATTCCAAAATCGACAAGGCGATGGAGTGTGTCTGGAAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367535.8
ENST00000367536.5
CDS-3UTR CAA 90 bp AAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCCATCGCCTTGTCGATTTaGGAATGTCTGGGCTCAGAC +
Preference number: 5 (lower is better)
Translates to: KKQDQYLEDSLVPFPDTSIALSI*ECLGSD
Trigger: GTCTGAGCCCAGACATTCCAAAATCGACAAGGCGAT...GGAAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367535.8
ENST00000367536.5
CDS-3UTR CAA 90 bp AAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCCCCACTTGTCTCTCATTaGGTCGAAACAGCTTGCCCA +
Preference number: 5 (lower is better)
Translates to: KKQDQYLEDSLVPFPDTSPLVSH*VETACP
Trigger: TGGGCAAGCTGTTTCGACCAAATGAGAGACAAGTGG...GGAAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
CDS-3UTR CAA 90 bp GCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCCTGGAGCTCTTCTTTaGTCTCAGGCACAAACCCAA +
Preference number: 5 (lower is better)
Translates to: ARNRISTWKTLSCPFQTLPGALL*SQAQTQ
Trigger: TTGGGTTTGTGCCTGAGACAAAAGAAGAGCTCCAGG...AAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp TCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCCATCCACTTTTCCCTGGAGCTCTTCTTTaGTCTCAGGCACAAACCCAA +
Preference number: 5 (lower is better)
Translates to: SVPGRLSRALSRHFHPLFPGALL*SQAQTQ
Trigger: TTGGGTTTGTGCCTGAGACAAAAGAAGAGCTCCAGG...GAAAAGTGGATGGAAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp TCTCTCGTGCCCTTTCCAGACACTTCCATCCACTTTTCCTCTCCCCTAACTCCTGTGGCCCAGTTATCATaGCCCTTCTTCAAGACAAAG +
Preference number: 5 (lower is better)
Translates to: SLVPFPDTSIHFSSPLTPVAQLS*PFFKTK
Trigger: CTTTGTCTTGAAGAAGGGCAATGATAACTGGGCCAC...AGGAGTTAGGGGAGAGGAAAAGTGGATGGAAGTGTCTGGAAAGGGCACGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp GCACTCAGAGCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCGTGGCCCAGTTATCATaGCCCTTCTTCAAGACAAAG +
Preference number: 5 (lower is better)
Translates to: ALRARNRISTWKTLSCPFVAQLS*PFFKTK
Trigger: CTTTGTCTTGAAGAAGGGCAATGATAACTGGGCCAC...GAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGCTCTGAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp AAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTAGCCCCTTCTGCCCGTaGAACATGACCGTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: KQEYLYLLLGPGLGCLVFSPFCP*NMTVAQ
Trigger: CTGGGCCACGGTCATGTTCAACGGGCAGAAGGGGCT...AAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp GTAATGGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGATGCCCACCTTCCCTTaGCACTCCCCTTCCAGCCAT +
Preference number: 5 (lower is better)
Translates to: VMVQKQEYLYLLLGPGLGMPTFP*HSPSSH
Trigger: ATGGCTGGAAGGGGAGTGCAAAGGGAAGGTGGGCAT...CCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACCATTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp GCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTATTTGTACTTACTCCTaGGGCCTGGACTTGGGTGTC +
Preference number: 5 (lower is better)
Translates to: ARNRISTWKTLSCPFQTLICTYS*GLDLGV
Trigger: GACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAAT...AAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS GCA 90 bp TTTCTCTGTCTGGTAGTAGAGCATCCCTCGTTGGAAGTAAGCCACTaGCAAGTGCTTGTCTCGGTTAATGCTTCTGGTAAAGGCCTTCTC +
Preference number: 5 (lower is better)
Translates to: FLCLVVEHPSLEVSH*QVLVSVNASGKGLL
Trigger: GAGAAGGCCTTTACCAGAAGCATTAACCGAGACAAGCACTTGGCAGTGGCTTACTTCCAACGAGGGATGCTCTACTACCAGACAGAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS CCA 90 bp CATATAGCTTCTGCTTCCAGACACACTCCATCGCCTTGTCGATTTTaGAATGTCTGGGCTCAGACTTCATGCTCGTGGCCAATGCTAACT +
Preference number: 5 (lower is better)
Translates to: HIASASRHTPSPCRF*NVWAQTSCSWPMLT
Trigger: AGTTAGCATTGGCCACGAGCATGAAGTCTGAGCCCAGACATTCCAAAATCGACAAGGCGATGGAGTGTGTCTGGAAGCAGAAGCTATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367535.8
ENST00000367536.5
CDS CCA 90 bp TTAGCCCAACCCTTGCTTGGACAGGAATTCCTACTGAGTAAGATCTaGCCCACTAGCTTGGGTAGTAGGAAGTGTGTGCATGATAGTGGA +
Preference number: 5 (lower is better)
Translates to: LAQPLLGQEFLLSKI*PTSLGSRKCVHDSG
Trigger: TCCACTATCATGCACACACTTCCTACTACCCAAGCTAGTGGGCCAGATCTTACTCAGTAGGAATTCCTGTCCAAGCAAGGGTTGGGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469280.1
CDS-3UTR CAA 90 bp CAGCAGAAGGGTGCTAAATCTTACAAACAAGTAATAGGGCTTCATTTTCTTCAGCCCTTCCAGTCCTTCTaGTCCGCTGCCAGCACCCCT +
Preference number: 5 (lower is better)
Translates to: QQKGAKSYKQVIGLHFLQPFQSF*SAASTP
Trigger: AGGGGTGCTGGCAGCGGACAAGAAGGACTGGAAGGG...CTGAAGAAAATGAAGCCCTATTACTTGTTTGTAAGATTTAGCACCCTTCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp GGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTGTAGAGCATCCCTCGTaGGAAGTAAGCCACTGCCAA +
Preference number: 5 (lower is better)
Translates to: GSETGIFVLTPWAWTWVSVEHPS*EVSHCQ
Trigger: TTGGCAGTGGCTTACTTCCAACGAGGGATGCTCTAC...AGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp GGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTTTGGTCGAAACAGCTaGCCCACAGGGATCACCACT +
Preference number: 5 (lower is better)
Translates to: GSETGIFVLTPWAWTWVSFGRNS*PTGITT
Trigger: AGTGGTGATCCCTGTGGGCAAGCTGTTTCGACCAAA...AGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
CDS-3UTR CAA 90 bp CAGCTTGATGAATGTTTACAGTGTGAACACAGCTGGCTAGCTAGCACTCAGAGCCCTGGAGCTCTTCTTTaGTCTCAGGCACAAACCCAA +
Preference number: 5 (lower is better)
Translates to: QLDECLQCEHSWLASTQSPGALL*SQAQTQ
Trigger: TTGGGTTTGTGCCTGAGACAAAAGAAGAGCTCCAGG...GCTCTGAGTGCTAGCTAGCCAGCTGTGTTCACACTGTAAACATTCATCAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp CAGCAGAAGGGTGCTAAATCTTACAAACAAGTAATAGGGCTTCATTTTCTTCAGAGCCCCTTCTGCCCGTaGAACATGACCGTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: QQKGAKSYKQVIGLHFLQSPFCP*NMTVAQ
Trigger: CTGGGCCACGGTCATGTTCAACGGGCAGAAGGGGCT...CTGAAGAAAATGAAGCCCTATTACTTGTTTGTAAGATTTAGCACCCTTCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp GGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTCTCCAGGTCCTCTGGTaGGGTAGCCTCATAACTGAA +
Preference number: 5 (lower is better)
Translates to: GSETGIFVLTPWAWTWVSLQVLW*GSLITE
Trigger: TTCAGTTATGAGGCTACCCAACCAGAGGACCTGGAG...AGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp GTAATGGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGGTAGAGCATCCCTCGTaGGAAGTAAGCCACTGCCAA +
Preference number: 5 (lower is better)
Translates to: VMVQKQEYLYLLLGPGLGVEHPS*EVSHCQ
Trigger: TTGGCAGTGGCTTACTTCCAACGAGGGATGCTCTAC...CCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACCATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp GCACTCAGAGCAAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCTTCCATTCCTCCTTCTaGGCATACATGAAAGCAATG +
Preference number: 5 (lower is better)
Translates to: ALRARNRISTWKTLSCPFFHSSF*AYMKAM
Trigger: CATTGCTTTCATGTATGCCAAGAAGGAGGAATGGAA...GAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTTGCTCTGAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367535.8
ENST00000367536.5
CDS-3UTR CAA 90 bp TCTCTCGTGCCCTTTCCAGACACTTCCATCCACTTTTCCTCTCCCCTAACTCCTTTCCATTCCTCCTTCTaGGCATACATGAAAGCAATG +
Preference number: 5 (lower is better)
Translates to: SLVPFPDTSIHFSSPLTPFHSSF*AYMKAM
Trigger: CATTGCTTTCATGTATGCCAAGAAGGAGGAATGGAA...AGGAGTTAGGGGAGAGGAAAAGTGGATGGAAGTGTCTGGAAAGGGCACGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367535.8
ENST00000367536.5
CDS-3UTR CAA 90 bp GGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTCCACTTGTCTCTCATTaGGTCGAAACAGCTTGCCCA +
Preference number: 5 (lower is better)
Translates to: GSETGIFVLTPWAWTWVSPLVSH*VETACP
Trigger: TGGGCAAGCTGTTTCGACCAAATGAGAGACAAGTGG...AGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
CDS-3UTR CAA 90 bp CAGCTTGATGAATGTTTACAGTGTGAACACAGCTGGCTAGCTAGCACTCAGAGCGTGGCCCAGTTATCATaGCCCTTCTTCAAGACAAAG +
Preference number: 5 (lower is better)
Translates to: QLDECLQCEHSWLASTQSVAQLS*PFFKTK
Trigger: CTTTGTCTTGAAGAAGGGCAATGATAACTGGGCCAC...GCTCTGAGTGCTAGCTAGCCAGCTGTGTTCACACTGTAAACATTCATCAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp AAGAAACAGGATCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCCGCTTTTTCACTTTCCTaGGGTTCATCTGGAAAGCCT +
Preference number: 5 (lower is better)
Translates to: KKQDQYLEDSLVPFPDTSAFSLS*GSSGKP
Trigger: AGGCTTTCCAGATGAACCCAAGGAAAGTGAAAAAGC...GGAAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGATCCTGTTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp GGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTGTAAGTTTGGTCGAAACAGCTaGCCCACAGGGATCACCACT +
Preference number: 5 (lower is better)
Translates to: GIFVLTPWAWTWVSCFCKFGRNS*PTGITT
Trigger: AGTGGTGATCCCTGTGGGCAAGCTGTTTCGACCAAA...CTTACAAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
CDS-3UTR CAA 90 bp GGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTGTAAGCTCCAGGTCCTCTGGTaGGGTAGCCTCATAACTGAA +
Preference number: 5 (lower is better)
Translates to: GIFVLTPWAWTWVSCFCKLQVLW*GSLITE
Trigger: TTCAGTTATGAGGCTACCCAACCAGAGGACCTGGAG...CTTACAAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp CCAATTACAGTAATGGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTTCACAGGCAAACAGCTaGAACTGGAGCCCCAGGATC +
Preference number: 5 (lower is better)
Translates to: PITVMVQKQEYLYLLLGPSQANS*NWSPRI
Trigger: GATCCTGGGGCTCCAGTTCAAGCTGTTTGCCTGTGA...AGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACCATTACTGTAATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp TGCCCCAGGAAATCATCCTGGGTACTCACATCATTGTCTAGTAGGTTAAATTTTCCCAGAGAAACTGTCTaGATCCACCACAGATGCCAC +
Preference number: 5 (lower is better)
Translates to: CPRKSSWVLTSLSSRLNFPRETV*IHHRCH
Trigger: GTGGCATCTGTGGTGGATCAAGACAGTTTCTCTGGG...AAAATTTAACCTACTAGACAATGATGTGAGTACCCAGGATGATTTCCTGGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp TCAGTACCTGGAAGACTCTCTCGTGCCCTTTCCAGACACTTCCATCCACTTTTCCACCAAATGTACAGCTaGATGAATGTTTACAGTGTG +
Preference number: 5 (lower is better)
Translates to: SVPGRLSRALSRHFHPLFHQMYS*MNVYSV
Trigger: CACACTGTAAACATTCATCAAGCTGTACATTTGGTG...GAAAAGTGGATGGAAGTGTCTGGAAAGGGCACGAGAGAGTCTTCCAGGTACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp CAGCAGAAGGGTGCTAAATCTTACAAACAAGTAATAGGGCTTCATTTTCTTCAGGCCACTGCCAAGTGCTaGTCTCGGTTAATGCTTCTG +
Preference number: 5 (lower is better)
Translates to: QQKGAKSYKQVIGLHFLQATAKC*SRLMLL
Trigger: CAGAAGCATTAACCGAGACAAGCACTTGGCAGTGGC...CTGAAGAAAATGAAGCCCTATTACTTGTTTGTAAGATTTAGCACCCTTCTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp TGCCCCAGGAAATCATCCTGGGTACTCACATCATTGTCTAGTAGGTTAAATTTTATCGCCTTGTCGATTTaGGAATGTCTGGGCTCAGAC +
Preference number: 5 (lower is better)
Translates to: CPRKSSWVLTSLSSRLNFIALSI*ECLGSD
Trigger: GTCTGAGCCCAGACATTCCAAAATCGACAAGGCGAT...AAAATTTAACCTACTAGACAATGATGTGAGTACCCAGGATGATTTCCTGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367535.8
ENST00000367536.5
CDS-3UTR CAA 90 bp GGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTGTAAGACACACTCCATCGCCTaGTCGATTTTGGAATGTCTG +
Preference number: 5 (lower is better)
Translates to: GIFVLTPWAWTWVSCFCKTHSIA*SILECL
Trigger: CAGACATTCCAAAATCGACAAGGCGATGGAGTGTGT...CTTACAAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367535.8
ENST00000367536.5
CDS-3UTR CAA 90 bp CCAATTACAGTAATGGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTCCCAGAGAAACTGTCTaGATCCACCACAGATGCCAC +
Preference number: 5 (lower is better)
Translates to: PITVMVQKQEYLYLLLGPPRETV*IHHRCH
Trigger: GTGGCATCTGTGGTGGATCAAGACAGTTTCTCTGGG...AGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACCATTACTGTAATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp CAGCAGAAGGGTGCTAAATCTTACAAACAAGTAATAGGGCTTCATTTTCTTCAGCCCAGAGAAACTGTCTaGATCCACCACAGATGCCAC +
Preference number: 5 (lower is better)
Translates to: QQKGAKSYKQVIGLHFLQPRETV*IHHRCH
Trigger: GTGGCATCTGTGGTGGATCAAGACAGTTTCTCTGGG...CTGAAGAAAATGAAGCCCTATTACTTGTTTGTAAGATTTAGCACCCTTCTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp AAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTTTCATCTGGAAAGCCTaGGTCACCCACTGTGTTCTC +
Preference number: 5 (lower is better)
Translates to: KQEYLYLLLGPGLGCLVFFIWKA*VTHCVL
Trigger: GAGAACACAGTGGGTGACCAAGGCTTTCCAGATGAA...AAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp GTAATGGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGGCTTTTTCACTTTCCTaGGGTTCATCTGGAAAGCCT +
Preference number: 5 (lower is better)
Translates to: VMVQKQEYLYLLLGPGLGAFSLS*GSSGKP
Trigger: AGGCTTTCCAGATGAACCCAAGGAAAGTGAAAAAGC...CCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACCATTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp CCAATTACAGTAATGGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTCTCCAGGTCCTCTGGTaGGGTAGCCTCATAACTGAA +
Preference number: 5 (lower is better)
Translates to: PITVMVQKQEYLYLLLGPLQVLW*GSLITE
Trigger: TTCAGTTATGAGGCTACCCAACCAGAGGACCTGGAG...AGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACCATTACTGTAATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp CAGCTTGATGAATGTTTACAGTGTGAACACAGCTGGCTAGCTAGCACTCAGAGCCACCAAATGTACAGCTaGATGAATGTTTACAGTGTG +
Preference number: 5 (lower is better)
Translates to: QLDECLQCEHSWLASTQSHQMYS*MNVYSV
Trigger: CACACTGTAAACATTCATCAAGCTGTACATTTGGTG...GCTCTGAGTGCTAGCTAGCCAGCTGTGTTCACACTGTAAACATTCATCAAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp TGCCCCAGGAAATCATCCTGGGTACTCACATCATTGTCTAGTAGGTTAAATTTTATTTGTACTTACTCCTaGGGCCTGGACTTGGGTGTC +
Preference number: 5 (lower is better)
Translates to: CPRKSSWVLTSLSSRLNFICTYS*GLDLGV
Trigger: GACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAAT...AAAATTTAACCTACTAGACAATGATGTGAGTACCCAGGATGATTTCCTGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp AAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTATTTGTACTTACTCCTaGGGCCTGGACTTGGGTGTC +
Preference number: 5 (lower is better)
Translates to: KQEYLYLLLGPGLGCLVFICTYS*GLDLGV
Trigger: GACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAAT...AAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp AAACAGGAATATTTGTACTTACTCCTTGGGCCTGGACTTGGGTGTCTTGTTTTTGTGGCCCAGTTATCATaGCCCTTCTTCAAGACAAAG +
Preference number: 5 (lower is better)
Translates to: KQEYLYLLLGPGLGCLVFVAQLS*PFFKTK
Trigger: CTTTGTCTTGAAGAAGGGCAATGATAACTGGGCCAC...AAAAACAAGACACCCAAGTCCAGGCCCAAGGAGTAAGTACAAATATTCCTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp CCAATTACAGTAATGGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTTTCATCTGGAAAGCCTaGGTCACCCACTGTGTTCTC +
Preference number: 5 (lower is better)
Translates to: PITVMVQKQEYLYLLLGPFIWKA*VTHCVL
Trigger: GAGAACACAGTGGGTGACCAAGGCTTTCCAGATGAA...AGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACCATTACTGTAATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp CAGCAGAAGGGTGCTAAATCTTACAAACAAGTAATAGGGCTTCATTTTCTTCAGGCTTTTTCACTTTCCTaGGGTTCATCTGGAAAGCCT +
Preference number: 5 (lower is better)
Translates to: QQKGAKSYKQVIGLHFLQAFSLS*GSSGKP
Trigger: AGGCTTTCCAGATGAACCCAAGGAAAGTGAAAAAGC...CTGAAGAAAATGAAGCCCTATTACTTGTTTGTAAGATTTAGCACCCTTCTGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp CCAATTACAGTAATGGTTCAGAAACAGGAATATTTGTACTTACTCCTTGGGCCTGCTTTTTCACTTTCCTaGGGTTCATCTGGAAAGCCT +
Preference number: 5 (lower is better)
Translates to: PITVMVQKQEYLYLLLGPAFSLS*GSSGKP
Trigger: AGGCTTTCCAGATGAACCCAAGGAAAGTGAAAAAGC...AGGCCCAAGGAGTAAGTACAAATATTCCTGTTTCTGAACCATTACTGTAATTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp TGCCCCAGGAAATCATCCTGGGTACTCACATCATTGTCTAGTAGGTTAAATTTTCACCAAATGTACAGCTaGATGAATGTTTACAGTGTG +
Preference number: 5 (lower is better)
Translates to: CPRKSSWVLTSLSSRLNFHQMYS*MNVYSV
Trigger: CACACTGTAAACATTCATCAAGCTGTACATTTGGTG...AAAATTTAACCTACTAGACAATGATGTGAGTACCCAGGATGATTTCCTGGGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS-3UTR CAA 90 bp CAGCAGAAGGGTGCTAAATCTTACAAACAAGTAATAGGGCTTCATTTTCTTCAGCACCAAATGTACAGCTaGATGAATGTTTACAGTGTG +
Preference number: 5 (lower is better)
Translates to: QQKGAKSYKQVIGLHFLQHQMYS*MNVYSV
Trigger: CACACTGTAAACATTCATCAAGCTGTACATTTGGTG...CTGAAGAAAATGAAGCCCTATTACTTGTTTGTAAGATTTAGCACCCTTCTGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS GCA 72 bp GGCATCCAGGGCTCCCTTCCAGTCCTTCTTGTCCGCTaGCAGCACCCCTTCATTCCAGAGGCTGATGGCCTC +
Preference number: 6 (lower is better)
Translates to: GIQGSLPVLLVR*QHPFIPEADGL
Trigger: GAGGCCATCAGCCTCTGGAATGAAGGGGTGCTGGCAGCGGACAAGAAGGACTGGAAGGGAGCCCTGGATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS CCA 72 bp CTGGGGTCTTCCAGGGGCTTTGGAACTAGGAGGAGCTaGGATGTCGGACTGCGGAGAGCTTTCCTCCTGGGG +
Preference number: 6 (lower is better)
Translates to: LGSSRGFGTRRS*DVGLRRAFLLG
Trigger: CCCCAGGAGGAAAGCTCTCCGCAGTCCGACATCCCAGCTCCTCCTAGTTCCAAAGCCCCTGGAAGACCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
ENST00000419402.1
CDS CAA 72 bp GCACTGAAGGCATCCAGGGCTCCCTTCCAGTCCTTCTaGTCCGCTGCCAGCACCCCTTCATTCCAGAGGCTG +
Preference number: 6 (lower is better)
Translates to: ALKASRAPFQSF*SAASTPSFQRL
Trigger: CAGCCTCTGGAATGAAGGGGTGCTGGCAGCGGACAAGAAGGACTGGAAGGGAGCCCTGGATGCCTTCAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS CCA 72 bp CTGGGGCTGCTGCTGAGGGTGGATCCGCAGCTCAACTaGTTCAAGGTAGTTGCAGGGAACAAGCCCCTTCTG +
Preference number: 6 (lower is better)
Translates to: LGLLLRVDPQLN*FKVVAGNKPLL
Trigger: CAGAAGGGGCTTGTTCCCTGCAACTACCTTGAACCAGTTGAGCTGCGGATCCACCCTCAGCAGCAGCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
ENST00000419402.1
CDS CCA 72 bp CTGGGGTCTTCCAGGGGCTTTGGAACTAGGAGGAGCTaGGATGTCGGACTGCGGAGAGCTTTCCTCCTGAAG +
Preference number: 6 (lower is better)
Translates to: LGSSRGFGTRRS*DVGLRRAFLLK
Trigger: CTTCAGGAGGAAAGCTCTCCGCAGTCCGACATCCCAGCTCCTCCTAGTTCCAAAGCCCCTGGAAGACCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420553.5
CDS CCA 72 bp GTGTACATGCAGCCAATGTTGAAGCAAATCCGGGAGTaGGGGTCCTGGACGGCACTGAAGGCATCCAGGGCT +
Preference number: 6 (lower is better)
Translates to: VYMQPMLKQIRE*GSWTALKASRA
Trigger: AGCCCTGGATGCCTTCAGTGCCGTCCAGGACCCCCACTCCCGGATTTGCTTCAACATTGGCTGCATGTACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS CAA 72 bp CTGTGGTTGCAGAGGGGCAAACCCAGAGAAACTGTCTaGATCCACCACAGATGCCACGACCGTCGCCTTGCC +
Preference number: 6 (lower is better)
Translates to: LWLQRGKPRETV*IHHRCHDRRLA
Trigger: GGCAAGGCGACGGTCGTGGCATCTGTGGTGGATCAAGACAGTTTCTCTGGGTTTGCCCCTCTGCAACCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
CDS TCA 72 bp TGTGGTTGCAGAGGGGCAAACCCAGAGAAACTGTCTTaGTCCACCACAGATGCCACGACCGTCGCCTTGCCT +
Preference number: 6 (lower is better)
Translates to: CGCRGANPEKLS*STTDATTVALP
Trigger: AGGCAAGGCGACGGTCGTGGCATCTGTGGTGGATCAAGACAGTTTCTCTGGGTTTGCCCCTCTGCAACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
CDS CCA 72 bp TCTCTCAACATCCTGGATCACCGCAGTTTCGTGATTTaGCACAGGGGGTACCCAATACAGCAGGGGAGAGGC +
Preference number: 6 (lower is better)
Translates to: SLNILDHRSFVI*HRGYPIQQGRG
Trigger: GCCTCTCCCCTGCTGTATTGGGTACCCCCTGTGCCAAATCACGAAACTGCGGTGATCCAGGATGTTGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469280.1
CDS TCA 72 bp TGTGGTTGCAGAGGGGCAAACCCAGAGAAACTGTCTTaGTCCACCACAGATGCCACGACCTCACAGGCAAAC +
Preference number: 6 (lower is better)
Translates to: CGCRGANPEKLS*STTDATTSQAN
Trigger: GTTTGCCTGTGAGGTCGTGGCATCTGTGGTGGATCAAGACAGTTTCTCTGGGTTTGCCCCTCTGCAACCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418089.5
CDS TCA 72 bp GGCTTTCTCTCAACATCCTGGATCACCGCAGTTTCGTaGTTTGGCACAGGGGGTACCCAATACAGCAGGGGA +
Preference number: 6 (lower is better)
Translates to: GFLSTSWITAVS*FGTGGTQYSRG
Trigger: TCCCCTGCTGTATTGGGTACCCCCTGTGCCAAATCACGAAACTGCGGTGATCCAGGATGTTGAGAGAAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469280.1
CDS CCA 72 bp ATGCCACGACCGTCGCCTTGCCTAGGTAATCCTTCTTaGCCAGCTGAGCCACTTGTCTCTCATTTGGTCGAA +
Preference number: 6 (lower is better)
Translates to: MPRPSPCLGNPS*PAEPLVSHLVE
Trigger: TTCGACCAAATGAGAGACAAGTGGCTCAGCTGGCCAAGAAGGATTACCTAGGCAAGGCGACGGTCGTGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
CDS CCA 72 bp CAGAGCCCTGAAGATCTCTGGGGTTTTCGGTCTGGGTaGAGGCTCAGCTGCCTATTGAACATTCAGGAGAAG +
Preference number: 6 (lower is better)
Translates to: QSPEDLWGFRSG*RLSCLLNIQEK
Trigger: CTTCTCCTGAATGTTCAATAGGCAGCTGAGCCTCCACCCAGACCGAAAACCCCAGAGATCTTCAGGGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419402.1
CDS CAA 72 bp CTGTGGTTGCAGAGGGGCAAACCCAGAGAAACTGTCTaGATCCACCACAGATGCCACGACCTCACAGGCAAA +
Preference number: 6 (lower is better)
Translates to: LWLQRGKPRETV*IHHRCHDLTGK
Trigger: TTTGCCTGTGAGGTCGTGGCATCTGTGGTGGATCAAGACAGTTTCTCTGGGTTTGCCCCTCTGCAACCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418089.5
CDS CAA 72 bp TTCTCTCAACATCCTGGATCACCGCAGTTTCGTGATTaGGCACAGGGGGTACCCAATACAGCAGGGGAGAGG +
Preference number: 6 (lower is better)
Translates to: FSQHPGSPQFRD*AQGVPNTAGER
Trigger: CCTCTCCCCTGCTGTATTGGGTACCCCCTGTGCCAAATCACGAAACTGCGGTGATCCAGGATGTTGAGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469280.1
CDS CAA 90 bp TCTGAGGCTTTCTCTCAACATCCTGGATCACCGCAGTTTCGTGATTaGGCACAGGGGGTACCCAATACAGCAGGGGAGAGGCCAGTAAGT +
Preference number: 6 (lower is better)
Translates to: SEAFSQHPGSPQFRD*AQGVPNTAGERPVS
Trigger: ACTTACTGGCCTCTCCCCTGCTGTATTGGGTACCCCCTGTGCCAAATCACGAAACTGCGGTGATCCAGGATGTTGAGAGAAAGCCTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469280.1
CDS TCA 72 bp TTAGTGGCCCCCAAGGTGTTCACTTTCTGGGCCAGATaGGTAGAATGGGGCCCAGCCTCCCTTAAGATAACT +
Preference number: 6 (lower is better)
Translates to: LVAPKVFTFWAR*VEWGPASLKIT
Trigger: AGTTATCTTAAGGGAGGCTGGGCCCCATTCTACTCATCTGGCCCAGAAAGTGAACACCTTGGGGGCCACTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413720.5
ENST00000418089.5
CDS TCA 72 bp CCACCACAGATGCCACGACCTCACAGGCAAACAGCTTaGACTGGAGCCCCAGGATCTTATAGTCTATCAGCT +
Preference number: 6 (lower is better)
Translates to: PPQMPRPHRQTA*TGAPGSYSLSA
Trigger: AGCTGATAGACTATAAGATCCTGGGGCTCCAGTTCAAGCTGTTTGCCTGTGAGGTCGTGGCATCTGTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418089.5
CDS GCA 72 bp CAGGTCCTCTGGTTGGGTAGCCTCATAACTGAAGAGTaGCTCCACTTGGCTGCCTTTCTTAAGCTGAGGTTC +
Preference number: 6 (lower is better)
Translates to: QVLWLGSLITEE*LHLAAFLKLRF
Trigger: GAACCTCAGCTTAAGAAAGGCAGCCAAGTGGAGGCACTCTTCAGTTATGAGGCTACCCAACCAGAGGACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS CCA 72 bp TCTGCTTCCAGACACACTCCATCGCCTTGTCGATTTTaGAATGTCTGGGCTCAGACTTCATGCTCGTGGCCA +
Preference number: 6 (lower is better)
Translates to: SASRHTPSPCRF*NVWAQTSCSWP
Trigger: TGGCCACGAGCATGAAGTCTGAGCCCAGACATTCCAAAATCGACAAGGCGATGGAGTGTGTCTGGAAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367535.8
ENST00000367536.5
CDS CAA 72 bp GTCATGTTCTTCAGGATAGTGTACATGCAGCCAATGTaGAAGCAAATCCGGGAGTGGGGGTCCTGGACGGCA +
Preference number: 6 (lower is better)
Translates to: VMFFRIVYMQPM*KQIREWGSWTA
Trigger: TGCCGTCCAGGACCCCCACTCCCGGATTTGCTTCAACATTGGCTGCATGTACACTATCCTGAAGAACATGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS CAA 72 bp TTCTGCTTCCAGACACACTCCATCGCCTTGTCGATTTaGGAATGTCTGGGCTCAGACTTCATGCTCGTGGCC +
Preference number: 6 (lower is better)
Translates to: FCFQTHSIALSI*ECLGSDFMLVA
Trigger: GGCCACGAGCATGAAGTCTGAGCCCAGACATTCCAAAATCGACAAGGCGATGGAGTGTGTCTGGAAGCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367535.8
ENST00000367536.5
CDS CAA 90 bp TCTGCTTCAGTCATGTTCTTCAGGATAGTGTACATGCAGCCAATGTaGAAGCAAATCCGGGAGTGGGGGTCCTGGACGGCACTGAAGGCA +
Preference number: 6 (lower is better)
Translates to: SASVMFFRIVYMQPM*KQIREWGSWTALKA
Trigger: TGCCTTCAGTGCCGTCCAGGACCCCCACTCCCGGATTTGCTTCAACATTGGCTGCATGTACACTATCCTGAAGAACATGACTGAAGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS CAA 90 bp TGCCTAGGTAATCCTTCTTGGCCAGCTGAGCCACTTGTCTCTCATTaGGTCGAAACAGCTTGCCCACAGGGATCACCACTGGCTCATATA +
Preference number: 6 (lower is better)
Translates to: CLGNPSWPAEPLVSH*VETACPQGSPLAHI
Trigger: TATATGAGCCAGTGGTGATCCCTGTGGGCAAGCTGTTTCGACCAAATGAGAGACAAGTGGCTCAGCTGGCCAAGAAGGATTACCTAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
CDS GCA 72 bp GCTGAGCCACTTGTCTCTCATTTGGTCGAAACAGCTTaGCCACAGGGATCACCACTGGCTCATATAGCTTCT +
Preference number: 6 (lower is better)
Translates to: AEPLVSHLVETA*PQGSPLAHIAS
Trigger: AGAAGCTATATGAGCCAGTGGTGATCCCTGTGGGCAAGCTGTTTCGACCAAATGAGAGACAAGTGGCTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
CDS CCA 72 bp CAGGATTATATCCCCTTCCTGAAACTCCAGGTCCTCTaGTTGGGTAGCCTCATAACTGAAGAGTGCCTCCAC +
Preference number: 6 (lower is better)
Translates to: QDYIPFLKLQVL*LGSLITEECLH
Trigger: GTGGAGGCACTCTTCAGTTATGAGGCTACCCAACCAGAGGACCTGGAGTTTCAGGAAGGGGATATAATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS CCA 72 bp TTTCCTCCTGAAGATCTCTGGGGTTTTCGGTCTGGGTaGAGGCTCAGCTGCCTATTGAACATTCAGGAGAAG +
Preference number: 6 (lower is better)
Translates to: FPPEDLWGFRSG*RLSCLLNIQEK
Trigger: CTTCTCCTGAATGTTCAATAGGCAGCTGAGCCTCCACCCAGACCGAAAACCCCAGAGATCTTCAGGAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420553.5
CDS CCA 72 bp GTACCCAATACAGCAGGGGAGAGGCCAGTAAGTAACTaGTTTCACAGTAGCCTAAAAGGCCTTCAGAGGTCC +
Preference number: 6 (lower is better)
Translates to: VPNTAGERPVSN*FHSSLKGLQRS
Trigger: GGACCTCTGAAGGCCTTTTAGGCTACTGTGAAACCAGTTACTTACTGGCCTCTCCCCTGCTGTATTGGGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469280.1
CDS CAA 90 bp CAGGTCCTCTGGTTGGGTAGCCTCATAACTGAAGAGTGCCTCCACTaGGCTGCCTTTCTTAAGCTGAGGTTCTGTTGTCTGGTTATTAGC +
Preference number: 6 (lower is better)
Translates to: QVLWLGSLITEECLH*AAFLKLRFCCLVIS
Trigger: GCTAATAACCAGACAACAGAACCTCAGCTTAAGAAAGGCAGCCAAGTGGAGGCACTCTTCAGTTATGAGGCTACCCAACCAGAGGACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS CCA 72 bp AGACACACTCCATCGCCTTGTCGATTTTGGAATGTCTaGGCTCAGACTTCATGCTCGTGGCCAATGCTAACT +
Preference number: 6 (lower is better)
Translates to: RHTPSPCRFWNV*AQTSCSWPMLT
Trigger: AGTTAGCATTGGCCACGAGCATGAAGTCTGAGCCCAGACATTCCAAAATCGACAAGGCGATGGAGTGTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367535.8
ENST00000367536.5
CDS CCA 72 bp CCCTTGCTTGGACAGGAATTCCTACTGAGTAAGATCTaGCCCACTAGCTTGGGTAGTAGGAAGTGTGTGCAT +
Preference number: 6 (lower is better)
Translates to: PLLGQEFLLSKI*PTSLGSRKCVH
Trigger: ATGCACACACTTCCTACTACCCAAGCTAGTGGGCCAGATCTTACTCAGTAGGAATTCCTGTCCAAGCAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469280.1
CDS CAA 72 bp GATTATATCCCCTTCCTGAAACTCCAGGTCCTCTGGTaGGGTAGCCTCATAACTGAAGAGTGCCTCCACTTG +
Preference number: 6 (lower is better)
Translates to: DYIPFLKLQVLW*GSLITEECLHL
Trigger: CAAGTGGAGGCACTCTTCAGTTATGAGGCTACCCAACCAGAGGACCTGGAGTTTCAGGAAGGGGATATAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS CAA 90 bp TCATATAGCTTCTGCTTCCAGACACACTCCATCGCCTTGTCGATTTaGGAATGTCTGGGCTCAGACTTCATGCTCGTGGCCAATGCTAAC +
Preference number: 6 (lower is better)
Translates to: SYSFCFQTHSIALSI*ECLGSDFMLVANAN
Trigger: GTTAGCATTGGCCACGAGCATGAAGTCTGAGCCCAGACATTCCAAAATCGACAAGGCGATGGAGTGTGTCTGGAAGCAGAAGCTATATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367535.8
ENST00000367536.5
CDS TCA 72 bp TGCCCTTCTTCAAGACAAAGACAATGTTCCCTGGCATaGCCTGGAGCTCTTCTTTTGTCTCAGGCACAAACC +
Preference number: 6 (lower is better)
Translates to: CPSSRQRQCSLA*PGALLLSQAQT
Trigger: GGTTTGTGCCTGAGACAAAAGAAGAGCTCCAGGTCATGCCAGGGAACATTGTCTTTGTCTTGAAGAAGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
ENST00000419402.1
CDS GCA 72 bp CTGGTAGTAGAGCATCCCTCGTTGGAAGTAAGCCACTaGCAAGTGCTTGTCTCGGTTAATGCTTCTGGTAAA +
Preference number: 6 (lower is better)
Translates to: LVVEHPSLEVSH*QVLVSVNASGK
Trigger: TTTACCAGAAGCATTAACCGAGACAAGCACTTGGCAGTGGCTTACTTCCAACGAGGGATGCTCTACTACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS CAA 72 bp CAGGAATTCCTACTGAGTAAGATCTGGCCCACTAGCTaGGGTAGTAGGAAGTGTGTGCATGATAGTGGAGGA +
Preference number: 6 (lower is better)
Translates to: QEFLLSKIWPTS*GSRKCVHDSGG
Trigger: TCCTCCACTATCATGCACACACTTCCTACTACCCAAGCTAGTGGGCCAGATCTTACTCAGTAGGAATTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469280.1
CDS TCA 72 bp GCTCATATAGCTTCTGCTTCTCACAGGCAAACAGCTTaGACTGGAGCCCCAGGATCTTATAGTCTATCAGCT +
Preference number: 6 (lower is better)
Translates to: AHIASASHRQTA*TGAPGSYSLSA
Trigger: AGCTGATAGACTATAAGATCCTGGGGCTCCAGTTCAAGCTGTTTGCCTGTGAGAAGCAGAAGCTATATGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413720.5
CDS CAA 72 bp ATCATATTTCTCTGTCTGGTAGTAGAGCATCCCTCGTaGGAAGTAAGCCACTGCCAAGTGCTTGTCTCGGTT +
Preference number: 6 (lower is better)
Translates to: IIFLCLVVEHPS*EVSHCQVLVSV
Trigger: AACCGAGACAAGCACTTGGCAGTGGCTTACTTCCAACGAGGGATGCTCTACTACCAGACAGAGAAATATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS CAA 90 bp GATAGCCAAATCATATTTCTCTGTCTGGTAGTAGAGCATCCCTCGTaGGAAGTAAGCCACTGCCAAGTGCTTGTCTCGGTTAATGCTTCT +
Preference number: 6 (lower is better)
Translates to: DSQIIFLCLVVEHPS*EVSHCQVLVSVNAS
Trigger: AGAAGCATTAACCGAGACAAGCACTTGGCAGTGGCTTACTTCCAACGAGGGATGCTCTACTACCAGACAGAGAAATATGATTTGGCTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS TCA 72 bp CTGAAGAGTGCCTCCACTTGGCTGCCTTTCTTAAGCTaGGGTTCTGTTGTCTGGTTATTAGCATCAGCTTTT +
Preference number: 6 (lower is better)
Translates to: LKSASTWLPFLS*GSVVWLLASAF
Trigger: AAAAGCTGATGCTAATAACCAGACAACAGAACCTCAGCTTAAGAAAGGCAGCCAAGTGGAGGCACTCTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS CAA 72 bp GTTGTCTGGTTATTAGCATCAGCTTTTTCACTTTCCTaGGGTTCATCTGGAAAGCCTTGGTCACCCACTGTG +
Preference number: 6 (lower is better)
Translates to: VVWLLASAFSLS*GSSGKPWSPTV
Trigger: CACAGTGGGTGACCAAGGCTTTCCAGATGAACCCAAGGAAAGTGAAAAAGCTGATGCTAATAACCAGACAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
CDS CCA 72 bp TTCTTCAAGACAAAGACAATGTTCCCTGGCATGACCTaGAGCTCTTCTTTTGTCTCAGGCACAAACCCAAAT +
Preference number: 6 (lower is better)
Translates to: FFKTKTMFPGMT*SSSFVSGTNPN
Trigger: ATTTGGGTTTGTGCCTGAGACAAAAGAAGAGCTCCAGGTCATGCCAGGGAACATTGTCTTTGTCTTGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367535.8
ENST00000367536.5
ENST00000413720.5
ENST00000418089.5
ENST00000419402.1
CDS CCA 72 bp AGTGTTGCAAATGCATCAGGAAATGTCCCCACCTTTTaGCAACTGACTCATAACCCTACCATGAGAGAGAAA +
Preference number: 6 (lower is better)
Translates to: SVANASGNVPTF*QLTHNPTMREK
Trigger: TTTCTCTCTCATGGTAGGGTTATGAGTCAGTTGCCAAAAGGTGGGGACATTTCCTGATGCATTTGCAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413720.5
ENST00000418089.5
CDS TCA 72 bp AAGCAATGTTATATAACACCTCACAGGCAAACAGCTTaGACTGGAGCCCCAGGATCTTATAGTCTATCAGCT +
Preference number: 6 (lower is better)
Translates to: KQCYITPHRQTA*TGAPGSYSLSA
Trigger: AGCTGATAGACTATAAGATCCTGGGGCTCCAGTTCAAGCTGTTTGCCTGTGAGGTGTTATATAACATTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367535.8
ENST00000367536.5