RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NCEH1 (Homo sapiens)

Ensembl gene IDs: ENSG00000144959

Ensembl transcript IDs: ENST00000421723.2, ENST00000424772.2, ENST00000475381.7, ENST00000538775.5, ENST00000543711.5

Found 377 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTCGTTGCTGGAAGTGGGAAATACCCCATCTTCCCAGGAGTGAAATaGTTCTACTTTCTCTCCGTGGTGCCCTGTATCATTACTCAGCTC +
Preference number: 1 (lower is better)
Translates to: FVAGSGKYPIFPGVK*FYFLSVVPCIITQL
Trigger: GAGCTGAGTAATGATACAGGGCACCACGGAGAGAAAGTAGAACCATTTCACTCCTGGGAAGATGGGGTATTTCCCACTTCCAGCAACGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR TCA 90 bp GTTATTTCGTTGCTGGAAGTGGGAAATACCCCATCTTCCCAGGAGTaGAATGGTTCTACTTTCTCTCCGTGGTGCCCTGTATCATTACTC +
Preference number: 1 (lower is better)
Translates to: VISLLEVGNTPSSQE*NGSTFSPWCPVSLL
Trigger: GAGTAATGATACAGGGCACCACGGAGAGAAAGTAGAACCATTTCACTCCTGGGAAGATGGGGTATTTCCCACTTCCAGCAACGAAATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR TCA 90 bp ACTCAGAACATGAGCTTGTGTTCCTCTGACCCTAAAAAGCGGAGATaGGCAGTGTGTGCCTTGCCTAAGCTACTGAACTATAAACCTAGA +
Preference number: 1 (lower is better)
Translates to: TQNMSLCSSDPKKRR*AVCALPKLLNYKPR
Trigger: TCTAGGTTTATAGTTCAGTAGCTTAGGCAAGGCACACACTGCTCATCTCCGCTTTTTAGGGTCAGAGGAACACAAGCTCATGTTCTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR CCA 90 bp AGACAGCTGGAGTACTCCACTGGGCAGAAGATTGGGAAAGAATTGTaGCTGGCAATTTGGCATACAGAAAGAAGAGAAGAGAACACTGTT +
Preference number: 1 (lower is better)
Translates to: RQLEYSTGQKIGKEL*LAIWHTERREENTV
Trigger: AACAGTGTTCTCTTCTCTTCTTTCTGTATGCCAAATTGCCAGCCACAATTCTTTCCCAATCTTCTGCCCAGTGGAGTACTCCAGCTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475381.7
3UTR CCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTaGCTCACAATTCTGGGGAAAATGCCAATTGAAGGAACCCTGCCT +
Preference number: 1 (lower is better)
Translates to: FRDPESFAVCNYYRL*LTILGKMPIEGTLP
Trigger: AGGCAGGGTTCCTTCAATTGGCATTTTCCCCAGAATTGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR CCA 90 bp AATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACAATTCTaGGGAAAATGCCAATTGAAGGAACCCTGCCTATACATTTTATTT +
Preference number: 1 (lower is better)
Translates to: NHLLSAITIGFGSQF*GKCQLKEPCLYILF
Trigger: AAATAAAATGTATAGGCAGGGTTCCTTCAATTGGCATTTTCCCCAGAATTGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR TCA 90 bp AAGGAGGAGATGGGGGATCTAGGCAACACCAGGTGCCAGTGTACGCCCTTCACTCTTGGTCCCCAGTACTaGCCTGAAAGTGCACGCATT +
Preference number: 2 (lower is better)
Translates to: KEEMGDLGNTRCQCTPFTLGPQY*PESARI
Trigger: AATGCGTGCACTTTCAGGTCAGTACTGGGGACCAAG...AGTGAAGGGCGTACACTGGCACCTGGTGTTGCCTAGATCCCCCATCTCCTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR TCA 90 bp ACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGACCCTAAAAAGCGGAGATaGGCAGTGTGTGCCTTGCCT +
Preference number: 2 (lower is better)
Translates to: TRCQCTPFTQNMSLCSSDPKKRR*AVCALP
Trigger: AGGCAAGGCACACACTGCTCATCTCCGCTTTTTAGG...GTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR TCA 90 bp GGACGGCAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTCCTAAAAAGCGGAGATaGGCAGTGTGTGCCTTGCCT +
Preference number: 2 (lower is better)
Translates to: GRQEGRQRSSTQITIGVSPKKRR*AVCALP
Trigger: AGGCAAGGCACACACTGCTCATCTCCGCTTTTTAGG...AGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTGCCGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR TCA 90 bp AAGGAGGAGATGGGGGATCTAGGCAACACCAGGTGCCAGTGTACGCCCTTCACTAGGAAGAAAGTCCTTTaGGAAACTTGTTCTTTCCAG +
Preference number: 2 (lower is better)
Translates to: KEEMGDLGNTRCQCTPFTRKKVL*ETCSFQ
Trigger: CTGGAAAGAACAAGTTTCTCAAAGGACTTTCTTCCT...AGTGAAGGGCGTACACTGGCACCTGGTGTTGCCTAGATCCCCCATCTCCTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR GCA 90 bp CAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTCTAGGCAACACCAGGTaGCAGTGTACGCCCTTCACT +
Preference number: 2 (lower is better)
Translates to: QEGRQRSSTQITIGVSCCLGNTR*QCTPFT
Trigger: AGTGAAGGGCGTACACTGGCACCTGGTGTTGCCTAG...ACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR CAA 90 bp AAGGACGGCAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATaGGAGTGTCTTGTTGTGTCAAAGATGTTCCCACTGGCAGTGAAG +
Preference number: 2 (lower is better)
Translates to: KDGRKAGRDPQLKSQ*ECLVVSKMFPLAVK
Trigger: CTTCACTGCCAGTGGGAACATCTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTGCCGTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR TCA 90 bp CAACACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTTAAAGGTCACTCTATaGTCCAGAGCTGGAAGAACT +
Preference number: 2 (lower is better)
Translates to: QHQVPVYALHSEHELVFLLKVTL*SRAGRT
Trigger: AGTTCTTCCAGCTCTGGATCATAGAGTGACCTTTAA...GAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR TCA 90 bp ACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGACTTAAAGGTCACTCTATaGTCCAGAGCTGGAAGAACT +
Preference number: 2 (lower is better)
Translates to: TRCQCTPFTQNMSLCSSDLKVTL*SRAGRT
Trigger: AGTTCTTCCAGCTCTGGATCATAGAGTGACCTTTAA...GTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR TCA 90 bp GGACGGCAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTCCCCAGTACTGACCTaGAAGTGCACGCATTTAATA +
Preference number: 2 (lower is better)
Translates to: GRQEGRQRSSTQITIGVSSPVLT*KCTHLI
Trigger: TATTAAATGCGTGCACTTTCAGGTCAGTACTGGGGA...AGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTGCCGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR GCA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGCTAGGCAACACCAGGTaGCAGTGTACGCCCTTCACT +
Preference number: 2 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKLGNTR*QCTPFT
Trigger: AGTGAAGGGCGTACACTGGCACCTGGTGTTGCCTAG...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR CCA 90 bp CAACACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCGAGATTGGCCCACTCTaGGAACCAAATTTACATGTT +
Preference number: 2 (lower is better)
Translates to: QHQVPVYALHSEHELVFLEIGPL*EPNLHV
Trigger: AACATGTAAATTTGGTTCCCAGAGTGGGCCAATCTC...GAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR TCA 90 bp CAACACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCAGGAAGAAAGTCCTTTaGGAAACTTGTTCTTTCCAG +
Preference number: 2 (lower is better)
Translates to: QHQVPVYALHSEHELVFLRKKVL*ETCSFQ
Trigger: CTGGAAAGAACAAGTTTCTCAAAGGACTTTCTTCCT...GAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR TCA 90 bp CAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTCCTTCACTCAGAACATaGGCTTGTGTTCCTCTGACC +
Preference number: 2 (lower is better)
Translates to: QEGRQRSSTQITIGVSCCPSLRT*ACVPLT
Trigger: GGTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGG...ACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR TCA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGTTAAGCTTGGGCTGTTaGAACTTCCAGACCTGGCTG +
Preference number: 2 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKLSLGC*NFQTWL
Trigger: CAGCCAGGTCTGGAAGTTTCAACAGCCCAAGCTTAA...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR GCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACACTAGGCAACACCAGGTaGCAGTGTACGCCCTTCACT +
Preference number: 2 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTLGNTR*QCTPFT
Trigger: AGTGAAGGGCGTACACTGGCACCTGGTGTTGCCTAG...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR GCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACAACTCAGCTCTGCTGCTaGTCTCCGCAGCCCCTAAAA +
Preference number: 2 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTTQLCC*SPQPLK
Trigger: TTTTAGGGGCTGCGGAGAGCAGCAGCAGAGCTGAGT...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR GCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACAATCATTACTCAGCTCTaGTGCTGCTCTCCGCAGCCC +
Preference number: 2 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTIITQL*CCSPQP
Trigger: GGGCTGCGGAGAGCAGCAGCAGAGCTGAGTAATGAT...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR TCA 90 bp CAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTTCCCCAGTACTGACCTaGAAGTGCACGCATTTAATA +
Preference number: 2 (lower is better)
Translates to: QEGRQRSSTQITIGVSCCSPVLT*KCTHLI
Trigger: TATTAAATGCGTGCACTTTCAGGTCAGTACTGGGGA...ACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR GCA 90 bp ACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGACCAAGTATATTCACACTaGTCTTGGTACTTTATGTCA +
Preference number: 2 (lower is better)
Translates to: TRCQCTPFTQNMSLCSSDQVYSH*SWYFMS
Trigger: TGACATAAAGTACCAAGAGCAGTGTGAATATACTTG...GTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR CCA 90 bp CAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGCAAGTAGAGGGGAATaGGAGGAAGAATTAGTCAAC +
Preference number: 2 (lower is better)
Translates to: QEGRQRSSTQITIGVSCCASRGE*EEELVN
Trigger: GTTGACTAATTCTTCCTCCCATTCCCCTCTACTTGC...ACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR CCA 90 bp CCAGTTCCTAGTCCTGCTTTCTGTAGCTGTAGGTATCAGTATAGTTGGCTAAGACAAGAACAGAGAGATTaGCCCACTCTGGGAACCAAA +
Preference number: 2 (lower is better)
Translates to: PVPSPAFCSCRYQYSWLRQEQRD*PTLGTK
Trigger: TTTGGTTCCCAGAGTGGGCCAATCTCTCTGTTCTTG...TCTTAGCCAACTATACTGATACCTACAGCTACAGAAAGCAGGACTAGGAACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR CCA 90 bp ACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGACTATTCACACTGCTCTTaGTACTTTATGTCAGAAGTA +
Preference number: 2 (lower is better)
Translates to: TRCQCTPFTQNMSLCSSDYSHCS*YFMSEV
Trigger: TACTTCTGACATAAAGTACCAAGAGCAGTGTGAATA...GTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR TCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACACCTTCACTCAGAACATaGGCTTGTGTTCCTCTGACC +
Preference number: 2 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTPSLRT*ACVPLT
Trigger: GGTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGG...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR TCA 90 bp CAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTTGTTCCCACTGGCAGTaGAGACTTTACATGAAGTTA +
Preference number: 2 (lower is better)
Translates to: QEGRQRSSTQITIGVSCCCSHWQ*RLYMKL
Trigger: TAACTTCATGTAAAGTCTTCACTGCCAGTGGGAACA...ACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR CCA 90 bp CCAGTTCCTAGTCCTGCTTTCTGTAGCTGTAGGTATCAGTATAGTTGGCTAAGAGCAAGTAGAGGGGAATaGGAGGAAGAATTAGTCAAC +
Preference number: 2 (lower is better)
Translates to: PVPSPAFCSCRYQYSWLRASRGE*EEELVN
Trigger: GTTGACTAATTCTTCCTCCCATTCCCCTCTACTTGC...TCTTAGCCAACTATACTGATACCTACAGCTACAGAAAGCAGGACTAGGAACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR TCA 90 bp CAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTAGGAAGAAAGTCCTTTaGGAAACTTGTTCTTTCCAG +
Preference number: 2 (lower is better)
Translates to: QEGRQRSSTQITIGVSCCRKKVL*ETCSFQ
Trigger: CTGGAAAGAACAAGTTTCTCAAAGGACTTTCTTCCT...ACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR TCA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGCCTTGCCTAAGCTACTaGACTATAAACCTAGATGAC +
Preference number: 2 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKPCLSY*TINLDD
Trigger: GTCATCTAGGTTTATAGTTCAGTAGCTTAGGCAAGG...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR TCA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGTGTTCCCACTGGCAGTaGAGACTTTACATGAAGTTA +
Preference number: 2 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKCSHWQ*RLYMKL
Trigger: TAACTTCATGTAAAGTCTTCACTGCCAGTGGGAACA...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR GCA 90 bp AACAATTCAGCTCAAACTCTTGGCATTATGATCATCCTTTTCCTAACATGTGTAACTCAGCTCTGCTGCTaGTCTCCGCAGCCCCTAAAA +
Preference number: 2 (lower is better)
Translates to: NNSAQTLGIMIILFLTCVTQLCC*SPQPLK
Trigger: TTTTAGGGGCTGCGGAGAGCAGCAGCAGAGCTGAGT...TACACATGTTAGGAAAAGGATGATCATAATGCCAAGAGTTTGAGCTGAATTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475381.7
3UTR-3UTR GCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACAACTTTCTCTCCGTGGTaGCCTGTATCATTACTCAGC +
Preference number: 2 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTTFSPW*PVSLLS
Trigger: GCTGAGTAATGATACAGGGCACCACGGAGAGAAAGT...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR CCA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGGAGATTGGCCCACTCTaGGAACCAAATTTACATGTT +
Preference number: 2 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKEIGPL*EPNLHV
Trigger: AACATGTAAATTTGGTTCCCAGAGTGGGCCAATCTC...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR CCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACACAAGAACAGAGAGATTaGCCCACTCTGGGAACCAAA +
Preference number: 2 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTQEQRD*PTLGTK
Trigger: TTTGGTTCCCAGAGTGGGCCAATCTCTCTGTTCTTG...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR TCA 90 bp AACAATTCAGCTCAAACTCTTGGCATTATGATCATCCTTTTCCTAACATGTGTACCTAAAAAGCGGAGATaGGCAGTGTGTGCCTTGCCT +
Preference number: 2 (lower is better)
Translates to: NNSAQTLGIMIILFLTCVPKKRR*AVCALP
Trigger: AGGCAAGGCACACACTGCTCATCTCCGCTTTTTAGG...TACACATGTTAGGAAAAGGATGATCATAATGCCAAGAGTTTGAGCTGAATTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475381.7
3UTR-3UTR TCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACACCATCTTCCCAGGAGTaGAATGGTTCTACTTTCTCT +
Preference number: 2 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTPSSQE*NGSTFS
Trigger: AGAGAAAGTAGAACCATTTCACTCCTGGGAAGATGG...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR CCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACATTCCCAGGAGTGAAATaGTTCTACTTTCTCTCCGTG +
Preference number: 2 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTFPGVK*FYFLSV
Trigger: CACGGAGAGAAAGTAGAACCATTTCACTCCTGGGAA...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR TCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACACCTTGCCTAAGCTACTaGACTATAAACCTAGATGAC +
Preference number: 2 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTPCLSY*TINLDD
Trigger: GTCATCTAGGTTTATAGTTCAGTAGCTTAGGCAAGG...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR GCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACAAGATGGGAAGTGGCTTaGCTAAGTACATTAGCAAGT +
Preference number: 2 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTRWEVA*LSTLAS
Trigger: ACTTGCTAATGTACTTAGGCAAGCCACTTCCCATCT...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR CCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACAGAGATTGGCCCACTCTaGGAACCAAATTTACATGTT +
Preference number: 2 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTEIGPL*EPNLHV
Trigger: AACATGTAAATTTGGTTCCCAGAGTGGGCCAATCTC...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR CCA 90 bp GGCTTTTATGAATATTCTAGCCAGTCCAAAGGAGGGCAACACATACTGTATCCAATTGGGAAAGAATTGTaGCTGGCAATTTGGCATACA +
Preference number: 2 (lower is better)
Translates to: GFYEYSSQSKGGQHILYPIGKEL*LAIWHT
Trigger: TGTATGCCAAATTGCCAGCCACAATTCTTTCCCAAT...TGGATACAGTATGTGTTGCCCTCCTTTGGACTGGCTAGAATATTCATAAAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475381.7
3UTR-3UTR GCA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGCAAGTATATTCACACTaGTCTTGGTACTTTATGTCA +
Preference number: 2 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKQVYSH*SWYFMS
Trigger: TGACATAAAGTACCAAGAGCAGTGTGAATATACTTG...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR CCA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGTATTCACACTGCTCTTaGTACTTTATGTCAGAAGTA +
Preference number: 2 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKYSHCS*YFMSEV
Trigger: TACTTCTGACATAAAGTACCAAGAGCAGTGTGAATA...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR CAA 90 bp GATCAACCATATACTTCTGTAAGACTTCTGGCTTCAGGAAATACTTaGTGGCCCGTACAACATCATGAATTTGCTCAGGAAAATAAACCT +
Preference number: 2 (lower is better)
Translates to: DQPYTSVRLLASGNT*WPVQHHEFAQENKP
Trigger: AGGTTTATTTTCCTGAGCAAATTCATGATGTTGTACGGGCCACAAAGTATTTCCTGAAGCCAGAAGTCTTACAGAAGTATATGGTTGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421723.2
3UTR-3UTR CCA 90 bp GGCTTTTATGAATATTCTAGCCAGTCCAAAGGAGGGCAACACATACTGTATCCATATTCACACTGCTCTTaGTACTTTATGTCAGAAGTA +
Preference number: 2 (lower is better)
Translates to: GFYEYSSQSKGGQHILYPYSHCS*YFMSEV
Trigger: TACTTCTGACATAAAGTACCAAGAGCAGTGTGAATA...TGGATACAGTATGTGTTGCCCTCCTTTGGACTGGCTAGAATATTCATAAAAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475381.7
3UTR-3UTR GCA 90 bp AACAATTCAGCTCAAACTCTTGGCATTATGATCATCCTTTTCCTAACATGTGTAGAATCATTTGCTGTCTaGAATTACTATAGGCTTTGG +
Preference number: 2 (lower is better)
Translates to: NNSAQTLGIMIILFLTCVESFAV*NYYRLW
Trigger: CCAAAGCCTATAGTAATTGCAGACAGCAAATGATTC...TACACATGTTAGGAAAAGGATGATCATAATGCCAAGAGTTTGAGCTGAATTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475381.7
3UTR-3UTR CCA 90 bp AACAATTCAGCTCAAACTCTTGGCATTATGATCATCCTTTTCCTAACATGTGTAATAAGGTCCAAATATTaGTTCCTTCAAATGGTGTCA +
Preference number: 2 (lower is better)
Translates to: NNSAQTLGIMIILFLTCVIRSKY*FLQMVS
Trigger: TGACACCATTTGAAGGAACCAATATTTGGACCTTAT...TACACATGTTAGGAAAAGGATGATCATAATGCCAAGAGTTTGAGCTGAATTGTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475381.7
3UTR GCA 72 bp TCCGTGGTGCCCTGTATCATTACTCAGCTCTGCTGCTaGTCTCCGCAGCCCCTAAAAGTAGCATGGATCGGG +
Preference number: 3 (lower is better)
Translates to: SVVPCIITQLCC*SPQPLKVAWIG
Trigger: CCCGATCCATGCTACTTTTAGGGGCTGCGGAGAGCAGCAGCAGAGCTGAGTAATGATACAGGGCACCACGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR GCA 72 bp TGGAAGGAGGAGATGGGGGATCTAGGCAACACCAGGTaGCAGTGTACGCCCTTCACTCAGAACATGAGCTTG +
Preference number: 3 (lower is better)
Translates to: WKEEMGDLGNTR*QCTPFTQNMSL
Trigger: CAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGTGTTGCCTAGATCCCCCATCTCCTCCTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR CAA 90 bp ACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGACAAGACCAGAGGGTACTaGGTCCCCAGTACTGACCTG +
Preference number: 3 (lower is better)
Translates to: TRCQCTPFTQNMSLCSSDKTRGY*VPSTDL
Trigger: CAGGTCAGTACTGGGGACCAAGTACCCTCTGGTCTT...GTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR GCA 72 bp TTTCTCTCCGTGGTGCCCTGTATCATTACTCAGCTCTaGTGCTGCTCTCCGCAGCCCCTAAAAGTAGCATGG +
Preference number: 3 (lower is better)
Translates to: FLSVVPCIITQL*CCSPQPLKVAW
Trigger: CCATGCTACTTTTAGGGGCTGCGGAGAGCAGCAGCAGAGCTGAGTAATGATACAGGGCACCACGGAGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR CAA 90 bp GGACGGCAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTAAGACCAGAGGGTACTaGGTCCCCAGTACTGACCTG +
Preference number: 3 (lower is better)
Translates to: GRQEGRQRSSTQITIGVSKTRGY*VPSTDL
Trigger: CAGGTCAGTACTGGGGACCAAGTACCCTCTGGTCTT...AGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTGCCGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR TCA 72 bp ACACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATaGGCTTGTGTTCCTCTGACCCTAAAAAGCGGAGAT +
Preference number: 3 (lower is better)
Translates to: TPGASVRPSLRT*ACVPLTLKSGD
Trigger: ATCTCCGCTTTTTAGGGTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR CAA 90 bp CAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTAAGACCAGAGGGTACTaGGTCCCCAGTACTGACCTG +
Preference number: 3 (lower is better)
Translates to: QEGRQRSSTQITIGVSCCKTRGY*VPSTDL
Trigger: CAGGTCAGTACTGGGGACCAAGTACCCTCTGGTCTT...ACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR TCA 72 bp TTGCTGGAAGTGGGAAATACCCCATCTTCCCAGGAGTaGAATGGTTCTACTTTCTCTCCGTGGTGCCCTGTA +
Preference number: 3 (lower is better)
Translates to: LLEVGNTPSSQE*NGSTFSPWCPV
Trigger: TACAGGGCACCACGGAGAGAAAGTAGAACCATTTCACTCCTGGGAAGATGGGGTATTTCCCACTTCCAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR CAA 90 bp CAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTTAAGCTTGGGCTGTaGAAACTTCCAGACCTGGCT +
Preference number: 3 (lower is better)
Translates to: QEGRQRSSTQITIGVSCCVKLGL*KLPDLA
Trigger: AGCCAGGTCTGGAAGTTTCAACAGCCCAAGCTTAAC...ACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR CAA 90 bp GGACGGCAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTGAGGAAGAAAGTCCTTaGAGAAACTTGTTCTTTCCA +
Preference number: 3 (lower is better)
Translates to: GRQEGRQRSSTQITIGVSEEESP*RNLFFP
Trigger: TGGAAAGAACAAGTTTCTCAAAGGACTTTCTTCCTC...AGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTGCCGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR TCA 72 bp ATGAGCTTGTGTTCCTCTGACCCTAAAAAGCGGAGATaGGCAGTGTGTGCCTTGCCTAAGCTACTGAACTAT +
Preference number: 3 (lower is better)
Translates to: MSLCSSDPKKRR*AVCALPKLLNY
Trigger: ATAGTTCAGTAGCTTAGGCAAGGCACACACTGCTCATCTCCGCTTTTTAGGGTCAGAGGAACACAAGCTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR CAA 90 bp GGACGGCAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTAGTCCTTTGAGAAACTaGTTCTTTCCAGAAAACCTT +
Preference number: 3 (lower is better)
Translates to: GRQEGRQRSSTQITIGVSSPLRN*FFPENL
Trigger: AAGGTTTTCTGGAAAGAACAAGTTTCTCAAAGGACT...AGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTGCCGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR GCA 72 bp AGAGAGCCTTTTAGAGATCCGGAATCATTTGCTGTCTaGAATTACTATAGGCTTTGGCTCACAATTCTGGGG +
Preference number: 3 (lower is better)
Translates to: REPFRDPESFAV*NYYRLWLTILG
Trigger: CCCCAGAATTGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAAAGGCTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR CCA 72 bp CCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTaGCTCACAATTCTGGGGAAAATGCCAATTGAAGGA +
Preference number: 3 (lower is better)
Translates to: PESFAVCNYYRL*LTILGKMPIEG
Trigger: TCCTTCAATTGGCATTTTCCCCAGAATTGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR TCA 72 bp CACCACATAAGGAGAGGCCAATATAATTTGCCAGTCTaGCAAGACAGTTGGTATTATAAGTGGAAGAGACCT +
Preference number: 3 (lower is better)
Translates to: HHIRRGQYNLPV*QDSWYYKWKRP
Trigger: AGGTCTCTTCCACTTATAATACCAACTGTCTTGTCAGACTGGCAAATTATATTGGCCTCTCCTTATGTGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR CAA 90 bp AACAATTCAGCTCAAACTCTTGGCATTATGATCATCCTTTTCCTAACATGTGTAGTTAAGCTTGGGCTGTaGAAACTTCCAGACCTGGCT +
Preference number: 3 (lower is better)
Translates to: NNSAQTLGIMIILFLTCVVKLGL*KLPDLA
Trigger: AGCCAGGTCTGGAAGTTTCAACAGCCCAAGCTTAAC...TACACATGTTAGGAAAAGGATGATCATAATGCCAAGAGTTTGAGCTGAATTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475381.7
3UTR-3UTR CAA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACAAATTGGAGTGTCTTGTaGTGTCAAAGATGTTCCCAC +
Preference number: 3 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTNWSVL*CQRCSH
Trigger: GTGGGAACATCTTTGACACAACAAGACACTCCAATT...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR-3UTR CAA 90 bp GGCTTTTATGAATATTCTAGCCAGTCCAAAGGAGGGCAACACATACTGTATCCAAGTCCTTTGAGAAACTaGTTCTTTCCAGAAAACCTT +
Preference number: 3 (lower is better)
Translates to: GFYEYSSQSKGGQHILYPSPLRN*FFPENL
Trigger: AAGGTTTTCTGGAAAGAACAAGTTTCTCAAAGGACT...TGGATACAGTATGTGTTGCCCTCCTTTGGACTGGCTAGAATATTCATAAAAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475381.7
3UTR CCA 72 bp ACTTCTGTAAGACTTCTGGCTTCAGGAAATACTTTGTaGCCCGTACAACATCATGAATTTGCTCAGGAAAAT +
Preference number: 3 (lower is better)
Translates to: TSVRLLASGNTL*PVQHHEFAQEN
Trigger: ATTTTCCTGAGCAAATTCATGATGTTGTACGGGCCACAAAGTATTTCCTGAAGCCAGAAGTCTTACAGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421723.2
3UTR TCA 72 bp GTGAAATTAGATTTATTTGTAATGACAAGGTCAGTTTaGGAACCTGCCTTCAGTGATAGTGATGCTTTGGCT +
Preference number: 3 (lower is better)
Translates to: VKLDLFVMTRSV*EPAFSDSDALA
Trigger: AGCCAAAGCATCACTATCACTGAAGGCAGGTTCTCAAACTGACCTTGTCATTACAAATAAATCTAATTTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475381.7
3UTR CCA 72 bp GTGATGCTTTGGCTGAAACAATTCAGCTCAAACTCTTaGCATTATGATCATCCTTTTCCTAACATGTGTATT +
Preference number: 3 (lower is better)
Translates to: VMLWLKQFSSNS*HYDHPFPNMCI
Trigger: AATACACATGTTAGGAAAAGGATGATCATAATGCCAAGAGTTTGAGCTGAATTGTTTCAGCCAAAGCATCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475381.7
3UTR-3UTR CAA 90 bp AACAATTCAGCTCAAACTCTTGGCATTATGATCATCCTTTTCCTAACATGTGTAGAGGAAGAAAGTCCTTaGAGAAACTTGTTCTTTCCA +
Preference number: 3 (lower is better)
Translates to: NNSAQTLGIMIILFLTCVEEESP*RNLFFP
Trigger: TGGAAAGAACAAGTTTCTCAAAGGACTTTCTTCCTC...TACACATGTTAGGAAAAGGATGATCATAATGCCAAGAGTTTGAGCTGAATTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475381.7
3UTR-3UTR CAA 90 bp AACAATTCAGCTCAAACTCTTGGCATTATGATCATCCTTTTCCTAACATGTGTACAACTCAAATCACAATaGGAGTGTCTTGTTGTGTCA +
Preference number: 3 (lower is better)
Translates to: NNSAQTLGIMIILFLTCVQLKSQ*ECLVVS
Trigger: TGACACAACAAGACACTCCAATTGTGATTTGAGTTG...TACACATGTTAGGAAAAGGATGATCATAATGCCAAGAGTTTGAGCTGAATTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475381.7
CDS-3UTR TCA 90 bp ACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGACGCGCCACCAGGGCGGTaGGCAGGACACAGGACGACC +
Preference number: 4 (lower is better)
Translates to: TRCQCTPFTQNMSLCSSDAPPGR*AGHRTT
Trigger: GGTCGTCCTGTGTCCTGCTCACCGCCCTGGTGGCGC...GTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp AAGGAGGAGATGGGGGATCTAGGCAACACCAGGTGCCAGTGTACGCCCTTCACTCTGCCTGGTCTGCAATaGGTGGGGCGGAGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: KEEMGDLGNTRCQCTPFTLPGLQ*VGRSGH
Trigger: ATGCCCGCTCCGCCCCACTCATTGCAGACCAGGCAG...AGTGAAGGGCGTACACTGGCACCTGGTGTTGCCTAGATCCCCCATCTCCTCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp AAGGAGGAGATGGGGGATCTAGGCAACACCAGGTGCCAGTGTACGCCCTTCACTGCGTCGGGAGGAAGTTaGAGCGCGGACATGCCCCCT +
Preference number: 4 (lower is better)
Translates to: KEEMGDLGNTRCQCTPFTASGGS*SADMPP
Trigger: AGGGGGCATGTCCGCGCTCCAACTTCCTCCCGACGC...AGTGAAGGGCGTACACTGGCACCTGGTGTTGCCTAGATCCCCCATCTCCTCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp AAGGAGGAGATGGGGGATCTAGGCAACACCAGGTGCCAGTGTACGCCCTTCACTGGCTCGCCAGCGGGCTaGCAAAGAGGAAAGGGCGAT +
Preference number: 4 (lower is better)
Translates to: KEEMGDLGNTRCQCTPFTGSPAG*QRGKGD
Trigger: ATCGCCCTTTCCTCTTTGCCAGCCCGCTGGCGAGCC...AGTGAAGGGCGTACACTGGCACCTGGTGTTGCCTAGATCCCCCATCTCCTCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp CAACACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCCTGCCTGGTCTGCAATaGGTGGGGCGGAGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: QHQVPVYALHSEHELVFLLPGLQ*VGRSGH
Trigger: ATGCCCGCTCCGCCCCACTCATTGCAGACCAGGCAG...GAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp AAGGAGGAGATGGGGGATCTAGGCAACACCAGGTGCCAGTGTACGCCCTTCACTGACGCTGCGTTTCAGTaGCTCTTCGGGCTTCGGAGG +
Preference number: 4 (lower is better)
Translates to: KEEMGDLGNTRCQCTPFTDAAFQ*LFGLRR
Trigger: CCTCCGAAGCCCGAAGAGCCACTGAAACGCAGCGTC...AGTGAAGGGCGTACACTGGCACCTGGTGTTGCCTAGATCCCCCATCTCCTCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475381.7
ENST00000538775.5
CDS-3UTR CCA 90 bp AAGGAGGAGATGGGGGATCTAGGCAACACCAGGTGCCAGTGTACGCCCTTCACTAGCTGCAGCACTGCCTaGTCTGCAATGAGTGGGGCG +
Preference number: 4 (lower is better)
Translates to: KEEMGDLGNTRCQCTPFTSCSTA*SAMSGA
Trigger: CGCCCCACTCATTGCAGACCAGGCAGTGCTGCAGCT...AGTGAAGGGCGTACACTGGCACCTGGTGTTGCCTAGATCCCCCATCTCCTCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp ACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGACAGGACGACCTCATCTTaGCCTGGCTCGGCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: TRCQCTPFTQNMSLCSSDRTTSS*PGSARQ
Trigger: CTGGCGAGCCGAGCCAGGGCAAGATGAGGTCGTCCT...GTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp AAGGAGGAGATGGGGGATCTAGGCAACACCAGGTGCCAGTGTACGCCCTTCACTGAGCCAATCAGAGGCTaGGTCGGGAGGAAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: KEEMGDLGNTRCQCTPFTEPIRG*VGRKLE
Trigger: CTCCAACTTCCTCCCGACGCAGCCTCTGATTGGCTC...AGTGAAGGGCGTACACTGGCACCTGGTGTTGCCTAGATCCCCCATCTCCTCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp CAACACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCGGCTCGCCAGCGGGCTaGCAAAGAGGAAAGGGCGAT +
Preference number: 4 (lower is better)
Translates to: QHQVPVYALHSEHELVFLGSPAG*QRGKGD
Trigger: ATCGCCCTTTCCTCTTTGCCAGCCCGCTGGCGAGCC...GAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp CAACACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCCTGGTCTGCAATGAGTaGGGCGGAGCGGGCATCCAG +
Preference number: 4 (lower is better)
Translates to: QHQVPVYALHSEHELVFLLVCNE*GGAGIQ
Trigger: CTGGATGCCCGCTCCGCCCCACTCATTGCAGACCAG...GAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp AAGGAGGAGATGGGGGATCTAGGCAACACCAGGTGCCAGTGTACGCCCTTCACTGTTACTCACTTGCTGTaGACCCCGGAAAGTGGCGTC +
Preference number: 4 (lower is better)
Translates to: KEEMGDLGNTRCQCTPFTVTHLL*TPESGV
Trigger: GACGCCACTTTCCGGGGTGCACAGCAAGTGAGTAAC...AGTGAAGGGCGTACACTGGCACCTGGTGTTGCCTAGATCCCCCATCTCCTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475381.7
ENST00000538775.5
CDS-3UTR GCA 90 bp CAACACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCCCTCCGGCAACTTTCTaGCCGCGGCAGCTGCTCATT +
Preference number: 4 (lower is better)
Translates to: QHQVPVYALHSEHELVFLPPATF*PRQLLI
Trigger: AATGAGCAGCTGCCGCGGGCAGAAAGTTGCCGGAGG...GAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp GGACGGCAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTCAGCACTGCCTGGTCTaGAATGAGTGGGGCGGAGCG +
Preference number: 4 (lower is better)
Translates to: GRQEGRQRSSTQITIGVSQHCLV*NEWGGA
Trigger: CGCTCCGCCCCACTCATTGCAGACCAGGCAGTGCTG...AGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTGCCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp CCAGTTCCTAGTCCTGCTTTCTGTAGCTGTAGGTATCAGTATAGTTGGCTAAGAGCGCCACCAGGGCGGTaGGCAGGACACAGGACGACC +
Preference number: 4 (lower is better)
Translates to: PVPSPAFCSCRYQYSWLRAPPGR*AGHRTT
Trigger: GGTCGTCCTGTGTCCTGCTCACCGCCCTGGTGGCGC...TCTTAGCCAACTATACTGATACCTACAGCTACAGAAAGCAGGACTAGGAACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp ACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGACAGTTTAGACGGGCCCTaGCAGCAGCAGCCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: TRCQCTPFTQNMSLCSSDSLDGP*QQQPLP
Trigger: TGGAAGAGGCTGCTGCTGTCAGGGCCCGTCTAAACT...GTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp ACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGACAGTCCGGATTCCCACTaGGAAGTTGGTGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: TRCQCTPFTQNMSLCSSDSPDSH*EVGGPA
Trigger: AGCTGGCCCACCAACTTCTCAGTGGGAATCCGGACT...GTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp CAACACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCGAGGAGCTGCAGCACTaGCTGGTCTGCAATGAGTGG +
Preference number: 4 (lower is better)
Translates to: QHQVPVYALHSEHELVFLEELQH*LVCNEW
Trigger: CCACTCATTGCAGACCAGGCAGTGCTGCAGCTCCTC...GAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp CAACACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCGTCTTTGGGAGGAGCTaGAGCACTGCCTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: QHQVPVYALHSEHELVFLVFGRS*STAWSA
Trigger: TGCAGACCAGGCAGTGCTGCAGCTCCTCCCAAAGAC...GAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp GGACGGCAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTGACGCTGCGTTTCAGTaGCTCTTCGGGCTTCGGAGG +
Preference number: 4 (lower is better)
Translates to: GRQEGRQRSSTQITIGVSDAAFQ*LFGLRR
Trigger: CCTCCGAAGCCCGAAGAGCCACTGAAACGCAGCGTC...AGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTGCCGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475381.7
ENST00000538775.5
CDS-3UTR CCA 90 bp GGACGGCAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTAGCTGCAGCACTGCCTaGTCTGCAATGAGTGGGGCG +
Preference number: 4 (lower is better)
Translates to: GRQEGRQRSSTQITIGVSSCSTA*SAMSGA
Trigger: CGCCCCACTCATTGCAGACCAGGCAGTGCTGCAGCT...AGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTGCCGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp TACTTCTGTAAGACTTCTGGCTTCAGGAAATACTTTGTGGCCCGTACAACATCAGCGCCACCAGGGCGGTaGGCAGGACACAGGACGACC +
Preference number: 4 (lower is better)
Translates to: YFCKTSGFRKYFVARTTSAPPGR*AGHRTT
Trigger: GGTCGTCCTGTGTCCTGCTCACCGCCCTGGTGGCGC...TGATGTTGTACGGGCCACAAAGTATTTCCTGAAGCCAGAAGTCTTACAGAAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421723.2
CDS-3UTR TCA 90 bp CAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTCTGCCTGGTCTGCAATaGGTGGGGCGGAGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: QEGRQRSSTQITIGVSCCLPGLQ*VGRSGH
Trigger: ATGCCCGCTCCGCCCCACTCATTGCAGACCAGGCAG...ACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp AAGGAGGAGATGGGGGATCTAGGCAACACCAGGTGCCAGTGTACGCCCTTCACTCCTTCACTCAGAACATaGGCTTGTGTTCCTCTGACC +
Preference number: 4 (lower is better)
Translates to: KEEMGDLGNTRCQCTPFTPSLRT*ACVPLT
Trigger: GGTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGG...AGTGAAGGGCGTACACTGGCACCTGGTGTTGCCTAGATCCCCCATCTCCTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp AAGGAGGAGATGGGGGATCTAGGCAACACCAGGTGCCAGTGTACGCCCTTCACTGGATATAAACGACGCTaGGTTTCAGTGGCTCTTCGG +
Preference number: 4 (lower is better)
Translates to: KEEMGDLGNTRCQCTPFTGYKRR*VSVALR
Trigger: CCGAAGAGCCACTGAAACGCAGCGTCGTTTATATCC...AGTGAAGGGCGTACACTGGCACCTGGTGTTGCCTAGATCCCCCATCTCCTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475381.7
ENST00000538775.5
CDS-3UTR GCA 90 bp CAACACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTCTGCCCGCGGCAGCTaGTCATTCACGCGTTTCTTA +
Preference number: 4 (lower is better)
Translates to: QHQVPVYALHSEHELVFLSARGS*SFTRFL
Trigger: TAAGAAACGCGTGAATGAGCAGCTGCCGCGGGCAGA...GAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp CAACACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCACTCAGCTCTGCTGCTaGTCTCCGCAGCCCCTAAAA +
Preference number: 4 (lower is better)
Translates to: QHQVPVYALHSEHELVFLTQLCC*SPQPLK
Trigger: TTTTAGGGGCTGCGGAGAGCAGCAGCAGAGCTGAGT...GAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp ACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGACTCGGTCACCTTCACTTaGGCAGAAGACCACGCGCTT +
Preference number: 4 (lower is better)
Translates to: TRCQCTPFTQNMSLCSSDSVTFT*AEDHAL
Trigger: AAGCGCGTGGTCTTCTGCCCAAGTGAAGGTGACCGA...GTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475381.7
ENST00000538775.5
CDS-3UTR TCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACAGCGCCACCAGGGCGGTaGGCAGGACACAGGACGACC +
Preference number: 4 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTAPPGR*AGHRTT
Trigger: GGTCGTCCTGTGTCCTGCTCACCGCCCTGGTGGCGC...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp CAACACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCCCCAATACTTCACCATaGCATAGCGGGGCAGGATTG +
Preference number: 4 (lower is better)
Translates to: QHQVPVYALHSEHELVFLPNTSP*HSGAGL
Trigger: CAATCCTGCCCCGCTATGTCATGGTGAAGTATTGGG...GAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp GGACGGCAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTCAGTCACTACAGGTTTaGGGAAGGCTCTGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: GRQEGRQRSSTQITIGVSQSLQV*GRLCRC
Trigger: GCAGCGACAGAGCCTTCCTCAAACCTGTAGTGACTG...AGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTGCCGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp TGGCTTCAGGAAATACTTTGTGGCCCGTACAACATCATGAATTTGCTCAGGAAAGACCTCATCTTGCCCTaGCTCGGCTCGCCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: WLQEILCGPYNIMNLLRKDLILP*LGSPAG
Trigger: GCCCGCTGGCGAGCCGAGCCAGGGCAAGATGAGGTC...TTTCCTGAGCAAATTCATGATGTTGTACGGGCCACAAAGTATTTCCTGAAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421723.2
CDS-3UTR CCA 90 bp CAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTCTGGTCTGCAATGAGTaGGGCGGAGCGGGCATCCAG +
Preference number: 4 (lower is better)
Translates to: QEGRQRSSTQITIGVSCCLVCNE*GGAGIQ
Trigger: CTGGATGCCCGCTCCGCCCCACTCATTGCAGACCAG...ACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGGCGTCGGGAGGAAGTTaGAGCGCGGACATGCCCCCT +
Preference number: 4 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKASGGS*SADMPP
Trigger: AGGGGGCATGTCCGCGCTCCAACTTCCTCCCGACGC...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp GGACGGCAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTCCCAATACTTCACCATaGCATAGCGGGGCAGGATTG +
Preference number: 4 (lower is better)
Translates to: GRQEGRQRSSTQITIGVSPNTSP*HSGAGL
Trigger: CAATCCTGCCCCGCTATGTCATGGTGAAGTATTGGG...AGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTGCCGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp ACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGACGCTTGTAGTTCTTTGTaGAGGATGCAGGCAAGAGGG +
Preference number: 4 (lower is better)
Translates to: TRCQCTPFTQNMSLCSSDACSSL*RMQARG
Trigger: CCCTCTTGCCTGCATCCTTCACAAAGAACTACAAGC...GTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp AAGGAGGAGATGGGGGATCTAGGCAACACCAGGTGCCAGTGTACGCCCTTCACTTCCCCAGTACTGACCTaGAAGTGCACGCATTTAATA +
Preference number: 4 (lower is better)
Translates to: KEEMGDLGNTRCQCTPFTSPVLT*KCTHLI
Trigger: TATTAAATGCGTGCACTTTCAGGTCAGTACTGGGGA...AGTGAAGGGCGTACACTGGCACCTGGTGTTGCCTAGATCCCCCATCTCCTCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp AAGGAGGAGATGGGGGATCTAGGCAACACCAGGTGCCAGTGTACGCCCTTCACTCCATCTTCCCAGGAGTaGAATGGTTCTACTTTCTCT +
Preference number: 4 (lower is better)
Translates to: KEEMGDLGNTRCQCTPFTPSSQE*NGSTFS
Trigger: AGAGAAAGTAGAACCATTTCACTCCTGGGAAGATGG...AGTGAAGGGCGTACACTGGCACCTGGTGTTGCCTAGATCCCCCATCTCCTCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp TTCTGGCTTCAGGAAATACTTTGTGGCCCGTACAACATCATGAATTTGCTCAGGAGGACGACCTCATCTTaGCCTGGCTCGGCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: FWLQEILCGPYNIMNLLRRTTSS*PGSARQ
Trigger: CTGGCGAGCCGAGCCAGGGCAAGATGAGGTCGTCCT...CCTGAGCAAATTCATGATGTTGTACGGGCCACAAAGTATTTCCTGAAGCCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421723.2
CDS-3UTR GCA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGAGGACGACCTCATCTTaGCCTGGCTCGGCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKRTTSS*PGSARQ
Trigger: CTGGCGAGCCGAGCCAGGGCAAGATGAGGTCGTCCT...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp ACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGACGGATATAAACGACGCTaGGTTTCAGTGGCTCTTCGG +
Preference number: 4 (lower is better)
Translates to: TRCQCTPFTQNMSLCSSDGYKRR*VSVALR
Trigger: CCGAAGAGCCACTGAAACGCAGCGTCGTTTATATCC...GTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475381.7
ENST00000538775.5
CDS-3UTR GCA 90 bp CAACACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCGGACAATCCTGGCATTaGCTGTGGTCTGTACAACAG +
Preference number: 4 (lower is better)
Translates to: QHQVPVYALHSEHELVFLGQSWH*LWSVQQ
Trigger: CTGTTGTACAGACCACAGGCAATGCCAGGATTGTCC...GAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp AAGGAGGAGATGGGGGATCTAGGCAACACCAGGTGCCAGTGTACGCCCTTCACTCAATTCTGGGGAAAATaGCAATTGAAGGAACCCTGC +
Preference number: 4 (lower is better)
Translates to: KEEMGDLGNTRCQCTPFTQFWGK*QLKEPC
Trigger: GCAGGGTTCCTTCAATTGGCATTTTCCCCAGAATTG...AGTGAAGGGCGTACACTGGCACCTGGTGTTGCCTAGATCCCCCATCTCCTCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp TTCTGGCTTCAGGAAATACTTTGTGGCCCGTACAACATCATGAATTTGCTCAGGGGCTCGCCAGCGGGCTaGCAAAGAGGAAAGGGCGAT +
Preference number: 4 (lower is better)
Translates to: FWLQEILCGPYNIMNLLRGSPAG*QRGKGD
Trigger: ATCGCCCTTTCCTCTTTGCCAGCCCGCTGGCGAGCC...CCTGAGCAAATTCATGATGTTGTACGGGCCACAAAGTATTTCCTGAAGCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421723.2
CDS-3UTR CCA 90 bp CAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTGCACCCCGGAAAGTaGCGTCCAGCAGCATCAGCT +
Preference number: 4 (lower is better)
Translates to: QEGRQRSSTQITIGVSCCVHPGK*RPAASA
Trigger: AGCTGATGCTGCTGGACGCCACTTTCCGGGGTGCAC...ACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp ACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGACATAGCGGGGCAGGATTaGGGTGTTCACATTTTGCTG +
Preference number: 4 (lower is better)
Translates to: TRCQCTPFTQNMSLCSSDIAGQD*GVHILL
Trigger: CAGCAAAATGTGAACACCCCAATCCTGCCCCGCTAT...GTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp ACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGACTCCTGGCATTGCCTGTaGTCTGTACAACAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: TRCQCTPFTQNMSLCSSDSWHCL*SVQQAC
Trigger: ACAAGCCTGTTGTACAGACCACAGGCAATGCCAGGA...GTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp CAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTAGTTTAGACGGGCCCTaGCAGCAGCAGCCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: QEGRQRSSTQITIGVSCCSLDGP*QQQPLP
Trigger: TGGAAGAGGCTGCTGCTGTCAGGGCCCGTCTAAACT...ACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp GGACGGCAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTCCTTCACTCAGAACATaGGCTTGTGTTCCTCTGACC +
Preference number: 4 (lower is better)
Translates to: GRQEGRQRSSTQITIGVSPSLRT*ACVPLT
Trigger: GGTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGG...AGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTGCCGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp CAACACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCGGGGAAAATGCCAATTaGAGGAACCCTGCCTATACA +
Preference number: 4 (lower is better)
Translates to: QHQVPVYALHSEHELVFLGENAN*RNPAYT
Trigger: TGTATAGGCAGGGTTCCTTCAATTGGCATTTTCCCC...GAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp AAGGAGGAGATGGGGGATCTAGGCAACACCAGGTGCCAGTGTACGCCCTTCACTAATGATAAAATTCAGTaGCAGCAGGTGATGGCTCAG +
Preference number: 4 (lower is better)
Translates to: KEEMGDLGNTRCQCTPFTNDKIQ*QQVMAQ
Trigger: CTGAGCCATCACCTGCTGGCACTGAATTTTATCATT...AGTGAAGGGCGTACACTGGCACCTGGTGTTGCCTAGATCCCCCATCTCCTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475381.7
ENST00000538775.5
CDS-3UTR GCA 90 bp TTCTGGCTTCAGGAAATACTTTGTGGCCCGTACAACATCATGAATTTGCTCAGGCCTCCGGCAACTTTCTaGCCGCGGCAGCTGCTCATT +
Preference number: 4 (lower is better)
Translates to: FWLQEILCGPYNIMNLLRPPATF*PRQLLI
Trigger: AATGAGCAGCTGCCGCGGGCAGAAAGTTGCCGGAGG...CCTGAGCAAATTCATGATGTTGTACGGGCCACAAAGTATTTCCTGAAGCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421723.2
CDS-3UTR GCA 90 bp CCAGTTCCTAGTCCTGCTTTCTGTAGCTGTAGGTATCAGTATAGTTGGCTAAGACCTCCGGCAACTTTCTaGCCGCGGCAGCTGCTCATT +
Preference number: 4 (lower is better)
Translates to: PVPSPAFCSCRYQYSWLRPPATF*PRQLLI
Trigger: AATGAGCAGCTGCCGCGGGCAGAAAGTTGCCGGAGG...TCTTAGCCAACTATACTGATACCTACAGCTACAGAAAGCAGGACTAGGAACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp ACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGACGTTCTTTGTGAAGGATaGAGGCAAGAGGGATGTCCA +
Preference number: 4 (lower is better)
Translates to: TRCQCTPFTQNMSLCSSDVLCEG*RQEGCP
Trigger: TGGACATCCCTCTTGCCTGCATCCTTCACAAAGAAC...GTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp AAGGAGGAGATGGGGGATCTAGGCAACACCAGGTGCCAGTGTACGCCCTTCACTAATAGTCCCAGGGCCTaGCTGGCTTTTATGAATATT +
Preference number: 4 (lower is better)
Translates to: KEEMGDLGNTRCQCTPFTNSPRA*LAFMNI
Trigger: AATATTCATAAAAGCCAGGCAGGCCCTGGGACTATT...AGTGAAGGGCGTACACTGGCACCTGGTGTTGCCTAGATCCCCCATCTCCTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475381.7
CDS-3UTR GCA 90 bp CCAGTTCCTAGTCCTGCTTTCTGTAGCTGTAGGTATCAGTATAGTTGGCTAAGAGTTGGAGCGCGGACATaGCCCCTCTACGGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: PVPSPAFCSCRYQYSWLRVGART*PLYGVL
Trigger: AAGGACACCGTAGAGGGGGCATGTCCGCGCTCCAAC...TCTTAGCCAACTATACTGATACCTACAGCTACAGAAAGCAGGACTAGGAACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGGTTGGAGCGCGGACATaGCCCCTCTACGGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKVGART*PLYGVL
Trigger: AAGGACACCGTAGAGGGGGCATGTCCGCGCTCCAAC...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGGTGCACCCCGGAAAGTaGCGTCCAGCAGCATCAGCT +
Preference number: 4 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKVHPGK*RPAASA
Trigger: AGCTGATGCTGCTGGACGCCACTTTCCGGGGTGCAC...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp GGACGGCAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTATAGCGGGGCAGGATTaGGGTGTTCACATTTTGCTG +
Preference number: 4 (lower is better)
Translates to: GRQEGRQRSSTQITIGVSIAGQD*GVHILL
Trigger: CAGCAAAATGTGAACACCCCAATCCTGCCCCGCTAT...AGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTGCCGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGAGCTGCAGCACTGCCTaGTCTGCAATGAGTGGGGCG +
Preference number: 4 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKSCSTA*SAMSGA
Trigger: CGCCCCACTCATTGCAGACCAGGCAGTGCTGCAGCT...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp GGACGGCAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTGGCCTTCAAACACTCTaGCTTCCACACCATCAAAGT +
Preference number: 4 (lower is better)
Translates to: GRQEGRQRSSTQITIGVSGLQTL*LPHHQS
Trigger: ACTTTGATGGTGTGGAAGTCAGAGTGTTTGAAGGCC...AGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTGCCGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475381.7
ENST00000538775.5
CDS-3UTR TCA 90 bp CAACACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTTTAGGCTGGCATCTTaGGTAAACTGTTGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: QHQVPVYALHSEHELVFLFRLAS*VNCCPR
Trigger: CCTTGGACAACAGTTTACTCAAGATGCCAGCCTAAA...GAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp AAGGAGGAGATGGGGGATCTAGGCAACACCAGGTGCCAGTGTACGCCCTTCACTACATCAAGTGAAGTGTaGTTGTTAACGATCATTGCC +
Preference number: 4 (lower is better)
Translates to: KEEMGDLGNTRCQCTPFTTSSEV*LLTIIA
Trigger: GGCAATGATCGTTAACAATCACACTTCACTTGATGT...AGTGAAGGGCGTACACTGGCACCTGGTGTTGCCTAGATCCCCCATCTCCTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp AAGGAGGAGATGGGGGATCTAGGCAACACCAGGTGCCAGTGTACGCCCTTCACTCTCTTCCACATCAAGTaGAGTGTGATTGTTAACGAT +
Preference number: 4 (lower is better)
Translates to: KEEMGDLGNTRCQCTPFTLFHIK*SVIVND
Trigger: ATCGTTAACAATCACACTTCACTTGATGTGGAAGAG...AGTGAAGGGCGTACACTGGCACCTGGTGTTGCCTAGATCCCCCATCTCCTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGAGTCCGGATTCCCACTaGGAAGTTGGTGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKSPDSH*EVGGPA
Trigger: AGCTGGCCCACCAACTTCTCAGTGGGAATCCGGACT...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp ACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGACCCATCTTCCCAGGAGTaGAATGGTTCTACTTTCTCT +
Preference number: 4 (lower is better)
Translates to: TRCQCTPFTQNMSLCSSDPSSQE*NGSTFS
Trigger: AGAGAAAGTAGAACCATTTCACTCCTGGGAAGATGG...GTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACAAGGACGACCTCATCTTaGCCTGGCTCGGCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTRTTSS*PGSARQ
Trigger: CTGGCGAGCCGAGCCAGGGCAAGATGAGGTCGTCCT...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACAGGACGCACTTGCACTTaGCAAGGCCCAGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTGRTCT*QGPASS
Trigger: GGAGGAGGCTGGGCCTTGGCAAGTGCAAGTGCGTCC...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538775.5
CDS-3UTR GCA 90 bp GGACGGCAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTATACCTGATTTCACTTaGTGTGCACCCCGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: GRQEGRQRSSTQITIGVSIPDFT*CAPRKV
Trigger: CACTTTCCGGGGTGCACAGCAAGTGAAATCAGGTAT...AGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTGCCGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543711.5
CDS-3UTR GCA 90 bp GGACGGCAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTGTTCTTTGTGAAGGATaGAGGCAAGAGGGATGTCCA +
Preference number: 4 (lower is better)
Translates to: GRQEGRQRSSTQITIGVSVLCEG*RQEGCP
Trigger: TGGACATCCCTCTTGCCTGCATCCTTCACAAAGAAC...AGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTGCCGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACACAGCACTGCCTGGTCTaGAATGAGTGGGGCGGAGCG +
Preference number: 4 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTQHCLV*NEWGGA
Trigger: CGCTCCGCCCCACTCATTGCAGACCAGGCAGTGCTG...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp CCAGTTCCTAGTCCTGCTTTCTGTAGCTGTAGGTATCAGTATAGTTGGCTAAGAGAGGAGCTGCAGCACTaGCTGGTCTGCAATGAGTGG +
Preference number: 4 (lower is better)
Translates to: PVPSPAFCSCRYQYSWLREELQH*LVCNEW
Trigger: CCACTCATTGCAGACCAGGCAGTGCTGCAGCTCCTC...TCTTAGCCAACTATACTGATACCTACAGCTACAGAAAGCAGGACTAGGAACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp CCAGTTCCTAGTCCTGCTTTCTGTAGCTGTAGGTATCAGTATAGTTGGCTAAGAGTCTTTGGGAGGAGCTaGAGCACTGCCTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PVPSPAFCSCRYQYSWLRVFGRS*STAWSA
Trigger: TGCAGACCAGGCAGTGCTGCAGCTCCTCCCAAAGAC...TCTTAGCCAACTATACTGATACCTACAGCTACAGAAAGCAGGACTAGGAACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp CAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTATCATTACTCAGCTCTaGTGCTGCTCTCCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: QEGRQRSSTQITIGVSCCIITQL*CCSPQP
Trigger: GGGCTGCGGAGAGCAGCAGCAGAGCTGAGTAATGAT...ACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp GGACGGCAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTACTTTCTCTCCGTGGTaGCCTGTATCATTACTCAGC +
Preference number: 4 (lower is better)
Translates to: GRQEGRQRSSTQITIGVSTFSPW*PVSLLS
Trigger: GCTGAGTAATGATACAGGGCACCACGGAGAGAAAGT...AGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTGCCGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp ACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGACCAATTCTGGGGAAAATaGCAATTGAAGGAACCCTGC +
Preference number: 4 (lower is better)
Translates to: TRCQCTPFTQNMSLCSSDQFWGK*QLKEPC
Trigger: GCAGGGTTCCTTCAATTGGCATTTTCCCCAGAATTG...GTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp AGACTTCTGGCTTCAGGAAATACTTTGTGGCCCGTACAACATCATGAATTTGCTGTGCACCCCGGAAAGTaGCGTCCAGCAGCATCAGCT +
Preference number: 4 (lower is better)
Translates to: RLLASGNTLWPVQHHEFAVHPGK*RPAASA
Trigger: AGCTGATGCTGCTGGACGCCACTTTCCGGGGTGCAC...AGCAAATTCATGATGTTGTACGGGCCACAAAGTATTTCCTGAAGCCAGAAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421723.2
CDS-3UTR TCA 90 bp TTGAGTAAACTGTTGTCCAAGGGCAGCAGCCAGATTTCCACCAGCACTGTCACCTTTAGGCTGGCATCTTaGGTAAACTGTTGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: LSKLLSKGSSQISTSTVTFRLAS*VNCCPR
Trigger: CCTTGGACAACAGTTTACTCAAGATGCCAGCCTAAA...GGTGACAGTGCTGGTGGAAATCTGGCTGCTGCCCTTGGACAACAGTTTACTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421723.2
CDS-3UTR TCA 90 bp CAACACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCAGTCATAGTTGCCTTTaGAGTAGTCCACCCAATACT +
Preference number: 4 (lower is better)
Translates to: QHQVPVYALHSEHELVFLSHSCL*SSPPNT
Trigger: AGTATTGGGTGGACTACTTCAAAGGCAACTATGACT...GAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp CAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTCTTGGTCCCCAGTACTaGCCTGAAAGTGCACGCATT +
Preference number: 4 (lower is better)
Translates to: QEGRQRSSTQITIGVSCCLGPQY*PESARI
Trigger: AATGCGTGCACTTTCAGGTCAGTACTGGGGACCAAG...ACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp CAACACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGTTCCCACTGGCAGTaGAGACTTTACATGAAGTTA +
Preference number: 4 (lower is better)
Translates to: QHQVPVYALHSEHELVFLCSHWQ*RLYMKL
Trigger: TAACTTCATGTAAAGTCTTCACTGCCAGTGGGAACA...GAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp GGACGGCAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTAATGAGACGGGAAAATaGAAGCACATTCCCAGATGG +
Preference number: 4 (lower is better)
Translates to: GRQEGRQRSSTQITIGVSNETGK*KHIPRW
Trigger: CCATCTGGGAATGTGCTTTCATTTTCCCGTCTCATT...AGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTGCCGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475381.7
CDS-3UTR GCA 90 bp AAGGAGGAGATGGGGGATCTAGGCAACACCAGGTGCCAGTGTACGCCCTTCACTCAGAAATGCAAATTCTaGCTGGATCAACCATATACT +
Preference number: 4 (lower is better)
Translates to: KEEMGDLGNTRCQCTPFTQKCKF*LDQPYT
Trigger: AGTATATGGTTGATCCAGGCAGAATTTGCATTTCTG...AGTGAAGGGCGTACACTGGCACCTGGTGTTGCCTAGATCCCCCATCTCCTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGCCTGATTTTTGCACTTaGCAAGGCCCAGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKPDFCT*QGPASS
Trigger: GGAGGAGGCTGGGCCTTGGCAAGTGCAAAAATCAGG...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475381.7
CDS-3UTR GCA 90 bp CCAGTTCCTAGTCCTGCTTTCTGTAGCTGTAGGTATCAGTATAGTTGGCTAAGACTAGGCAACACCAGGTaGCAGTGTACGCCCTTCACT +
Preference number: 4 (lower is better)
Translates to: PVPSPAFCSCRYQYSWLRLGNTR*QCTPFT
Trigger: AGTGAAGGGCGTACACTGGCACCTGGTGTTGCCTAG...TCTTAGCCAACTATACTGATACCTACAGCTACAGAAAGCAGGACTAGGAACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp CCAGTTCCTAGTCCTGCTTTCTGTAGCTGTAGGTATCAGTATAGTTGGCTAAGAACTCAGCTCTGCTGCTaGTCTCCGCAGCCCCTAAAA +
Preference number: 4 (lower is better)
Translates to: PVPSPAFCSCRYQYSWLRTQLCC*SPQPLK
Trigger: TTTTAGGGGCTGCGGAGAGCAGCAGCAGAGCTGAGT...TCTTAGCCAACTATACTGATACCTACAGCTACAGAAAGCAGGACTAGGAACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGATCATTACTCAGCTCTaGTGCTGCTCTCCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKIITQL*CCSPQP
Trigger: GGGCTGCGGAGAGCAGCAGCAGAGCTGAGTAATGAT...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp ACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGACAGATGGGAAGTGGCTTaGCTAAGTACATTAGCAAGT +
Preference number: 4 (lower is better)
Translates to: TRCQCTPFTQNMSLCSSDRWEVA*LSTLAS
Trigger: ACTTGCTAATGTACTTAGGCAAGCCACTTCCCATCT...GTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp AAGGAGGAGATGGGGGATCTAGGCAACACCAGGTGCCAGTGTACGCCCTTCACTGAATCATTTGCTGTCTaGAATTACTATAGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: KEEMGDLGNTRCQCTPFTESFAV*NYYRLW
Trigger: CCAAAGCCTATAGTAATTGCAGACAGCAAATGATTC...AGTGAAGGGCGTACACTGGCACCTGGTGTTGCCTAGATCCCCCATCTCCTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp CCAGTTCCTAGTCCTGCTTTCTGTAGCTGTAGGTATCAGTATAGTTGGCTAAGATCGGTCACCTTCACTTaGGCAGAAGACCACGCGCTT +
Preference number: 4 (lower is better)
Translates to: PVPSPAFCSCRYQYSWLRSVTFT*AEDHAL
Trigger: AAGCGCGTGGTCTTCTGCCCAAGTGAAGGTGACCGA...TCTTAGCCAACTATACTGATACCTACAGCTACAGAAAGCAGGACTAGGAACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475381.7
ENST00000538775.5
CDS-3UTR CCA 90 bp AAGGAGGAGATGGGGGATCTAGGCAACACCAGGTGCCAGTGTACGCCCTTCACTAATGCAAATTCTGCCTaGATCAACCATATACTTCTG +
Preference number: 4 (lower is better)
Translates to: KEEMGDLGNTRCQCTPFTNANSA*INHILL
Trigger: CAGAAGTATATGGTTGATCCAGGCAGAATTTGCATT...AGTGAAGGGCGTACACTGGCACCTGGTGTTGCCTAGATCCCCCATCTCCTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp CAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGCTCCTGGACAATCCTaGCATTGCCTGTGGTCTGTA +
Preference number: 4 (lower is better)
Translates to: QEGRQRSSTQITIGVSCCAPGQS*HCLWSV
Trigger: TACAGACCACAGGCAATGCCAGGATTGTCCAGGAGC...ACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp GGACGGCAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTGCAAGTAGAGGGGAATaGGAGGAAGAATTAGTCAAC +
Preference number: 4 (lower is better)
Translates to: GRQEGRQRSSTQITIGVSASRGE*EEELVN
Trigger: GTTGACTAATTCTTCCTCCCATTCCCCTCTACTTGC...AGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTGCCGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp ACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGACGAGATTGGCCCACTCTaGGAACCAAATTTACATGTT +
Preference number: 4 (lower is better)
Translates to: TRCQCTPFTQNMSLCSSDEIGPL*EPNLHV
Trigger: AACATGTAAATTTGGTTCCCAGAGTGGGCCAATCTC...GTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp GGACGGCAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTTCCCAGGAGTGAAATaGTTCTACTTTCTCTCCGTG +
Preference number: 4 (lower is better)
Translates to: GRQEGRQRSSTQITIGVSFPGVK*FYFLSV
Trigger: CACGGAGAGAAAGTAGAACCATTTCACTCCTGGGAA...AGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTGCCGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
3UTR CAA 72 bp GCAGTGAAGACTTTACATGAAGTTAAGCTTGGGCTGTaGAAACTTCCAGACCTGGCTGGAAGGAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: AVKTLHEVKLGL*KLPDLAGRRRW
Trigger: CCATCTCCTCCTTCCAGCCAGGTCTGGAAGTTTCAACAGCCCAAGCTTAACTTCATGTAAAGTCTTCACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp CAACACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCACATCAAGTGAAGTGTaGTTGTTAACGATCATTGCC +
Preference number: 4 (lower is better)
Translates to: QHQVPVYALHSEHELVFLTSSEV*LLTIIA
Trigger: GGCAATGATCGTTAACAATCACACTTCACTTGATGT...GAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACAAGTTTAGACGGGCCCTaGCAGCAGCAGCCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTSLDGP*QQQPLP
Trigger: TGGAAGAGGCTGCTGCTGTCAGGGCCCGTCTAAACT...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACAAGTCCGGATTCCCACTaGGAAGTTGGTGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTSPDSH*EVGGPA
Trigger: AGCTGGCCCACCAACTTCTCAGTGGGAATCCGGACT...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp CCAGTTCCTAGTCCTGCTTTCTGTAGCTGTAGGTATCAGTATAGTTGGCTAAGACTTGGTCCCCAGTACTaGCCTGAAAGTGCACGCATT +
Preference number: 4 (lower is better)
Translates to: PVPSPAFCSCRYQYSWLRLGPQY*PESARI
Trigger: AATGCGTGCACTTTCAGGTCAGTACTGGGGACCAAG...TCTTAGCCAACTATACTGATACCTACAGCTACAGAAAGCAGGACTAGGAACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp ACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGACAGGAAGAAAGTCCTTTaGGAAACTTGTTCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: TRCQCTPFTQNMSLCSSDRKKVL*ETCSFQ
Trigger: CTGGAAAGAACAAGTTTCTCAAAGGACTTTCTTCCT...GTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp GGACGGCAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTCCTTGCCTAAGCTACTaGACTATAAACCTAGATGAC +
Preference number: 4 (lower is better)
Translates to: GRQEGRQRSSTQITIGVSPCLSY*TINLDD
Trigger: GTCATCTAGGTTTATAGTTCAGTAGCTTAGGCAAGG...AGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTGCCGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp CCAGTTCCTAGTCCTGCTTTCTGTAGCTGTAGGTATCAGTATAGTTGGCTAAGACCTAAAAAGCGGAGATaGGCAGTGTGTGCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: PVPSPAFCSCRYQYSWLRPKKRR*AVCALP
Trigger: AGGCAAGGCACACACTGCTCATCTCCGCTTTTTAGG...TCTTAGCCAACTATACTGATACCTACAGCTACAGAAAGCAGGACTAGGAACTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGCCTAAAAAGCGGAGATaGGCAGTGTGTGCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKPKKRR*AVCALP
Trigger: AGGCAAGGCACACACTGCTCATCTCCGCTTTTTAGG...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp GGACGGCAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTCCCACTGGCAGTaGAGACTTTACATGAAGTTA +
Preference number: 4 (lower is better)
Translates to: GRQEGRQRSSTQITIGVSCSHWQ*RLYMKL
Trigger: TAACTTCATGTAAAGTCTTCACTGCCAGTGGGAACA...AGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTGCCGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp CAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTCATCAAGGAGGCCACTaGACCACCTCTCTAAAGGAA +
Preference number: 4 (lower is better)
Translates to: QEGRQRSSTQITIGVSCCHQGGH*TTSLKE
Trigger: TTCCTTTAGAGAGGTGGTTCAGTGGCCTCCTTGATG...ACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475381.7
CDS-3UTR GCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACAGAGGAGCTGCAGCACTaGCTGGTCTGCAATGAGTGG +
Preference number: 4 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTEELQH*LVCNEW
Trigger: CCACTCATTGCAGACCAGGCAGTGCTGCAGCTCCTC...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACAGTCTTTGGGAGGAGCTaGAGCACTGCCTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTVFGRS*STAWSA
Trigger: TGCAGACCAGGCAGTGCTGCAGCTCCTCCCAAAGAC...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp CAACACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCGGCTTCTGGAAGTTTTaGTCCTTTACAGGTTTTGAT +
Preference number: 4 (lower is better)
Translates to: QHQVPVYALHSEHELVFLGFWKF*SFTGFD
Trigger: ATCAAAACCTGTAAAGGAGCAAAACTTCCAGAAGCC...GAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp GGCTTTTATGAATATTCTAGCCAGTCCAAAGGAGGGCAACACATACTGTATCCAATCATTACTCAGCTCTaGTGCTGCTCTCCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: GFYEYSSQSKGGQHILYPIITQL*CCSPQP
Trigger: GGGCTGCGGAGAGCAGCAGCAGAGCTGAGTAATGAT...TGGATACAGTATGTGTTGCCCTCCTTTGGACTGGCTAGAATATTCATAAAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475381.7
CDS-3UTR GCA 90 bp ACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGACCATTTGTTATTTCGTTaGTGGAAGTGGGAAATACCC +
Preference number: 4 (lower is better)
Translates to: TRCQCTPFTQNMSLCSSDHLLFR*WKWEIP
Trigger: GGGTATTTCCCACTTCCAGCAACGAAATAACAAATG...GTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACAGAGCCAATCAGAGGCTaGGTCGGGAGGAAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTEPIRG*VGRKLE
Trigger: CTCCAACTTCCTCCCGACGCAGCCTCTGATTGGCTC...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp ACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGACTCAGGAAATACTTTGTaGCCCGTACAACATCATGAA +
Preference number: 4 (lower is better)
Translates to: TRCQCTPFTQNMSLCSSDSGNTL*PVQHHE
Trigger: TTCATGATGTTGTACGGGCCACAAAGTATTTCCTGA...GTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGGCTCCTGGACAATCCTaGCATTGCCTGTGGTCTGTA +
Preference number: 4 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKAPGQS*HCLWSV
Trigger: TACAGACCACAGGCAATGCCAGGATTGTCCAGGAGC...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGCAGAATGTAGGTCTTTaGGAGGAGCTGCAGCACTGC +
Preference number: 4 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKQNVGL*EELQHC
Trigger: GCAGTGCTGCAGCTCCTCCCAAAGACCTACATTCTG...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp CCAGTTCCTAGTCCTGCTTTCTGTAGCTGTAGGTATCAGTATAGTTGGCTAAGACAGAATGTAGGTCTTTaGGAGGAGCTGCAGCACTGC +
Preference number: 4 (lower is better)
Translates to: PVPSPAFCSCRYQYSWLRQNVGL*EELQHC
Trigger: GCAGTGCTGCAGCTCCTCCCAAAGACCTACATTCTG...TCTTAGCCAACTATACTGATACCTACAGCTACAGAAAGCAGGACTAGGAACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp GGACGGCAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTGAGATTGGCCCACTCTaGGAACCAAATTTACATGTT +
Preference number: 4 (lower is better)
Translates to: GRQEGRQRSSTQITIGVSEIGPL*EPNLHV
Trigger: AACATGTAAATTTGGTTCCCAGAGTGGGCCAATCTC...AGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTGCCGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp CAACACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTTGTTATTTCGTTGCTaGAAGTGGGAAATACCCCAT +
Preference number: 4 (lower is better)
Translates to: QHQVPVYALHSEHELVFLLLFRC*KWEIPH
Trigger: ATGGGGTATTTCCCACTTCCAGCAACGAAATAACAA...GAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp ACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGACTTGTTATTTCGTTGCTaGAAGTGGGAAATACCCCAT +
Preference number: 4 (lower is better)
Translates to: TRCQCTPFTQNMSLCSSDLLFRC*KWEIPH
Trigger: ATGGGGTATTTCCCACTTCCAGCAACGAAATAACAA...GTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp CAACACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTTTGGCTCACAATTCTaGGGAAAATGCCAATTGAAG +
Preference number: 4 (lower is better)
Translates to: QHQVPVYALHSEHELVFLFGSQF*GKCQLK
Trigger: CTTCAATTGGCATTTTCCCCAGAATTGTGAGCCAAA...GAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp ACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGACATTGGGAAAGAATTGTaGCTGGCAATTTGGCATACA +
Preference number: 4 (lower is better)
Translates to: TRCQCTPFTQNMSLCSSDIGKEL*LAIWHT
Trigger: TGTATGCCAAATTGCCAGCCACAATTCTTTCCCAAT...GTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475381.7
CDS-3UTR TCA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGGCTTGTAGTTCTTTGTaGAGGATGCAGGCAAGAGGG +
Preference number: 4 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKACSSL*RMQARG
Trigger: CCCTCTTGCCTGCATCCTTCACAAAGAACTACAAGC...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACACAGTCACTACAGGTTTaGGGAAGGCTCTGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTQSLQV*GRLCRC
Trigger: GCAGCGACAGAGCCTTCCTCAAACCTGTAGTGACTG...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp ACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGACCAGAAATGCAAATTCTaGCTGGATCAACCATATACT +
Preference number: 4 (lower is better)
Translates to: TRCQCTPFTQNMSLCSSDQKCKF*LDQPYT
Trigger: AGTATATGGTTGATCCAGGCAGAATTTGCATTTCTG...GTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACATCTGCCCGCGGCAGCTaGTCATTCACGCGTTTCTTA +
Preference number: 4 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTSARGS*SFTRFL
Trigger: TAAGAAACGCGTGAATGAGCAGCTGCCGCGGGCAGA...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp CAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTTCTTTGTGAAGGATaGAGGCAAGAGGGATGTCCA +
Preference number: 4 (lower is better)
Translates to: QEGRQRSSTQITIGVSCCVLCEG*RQEGCP
Trigger: TGGACATCCCTCTTGCCTGCATCCTTCACAAAGAAC...ACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGGGACAATCCTGGCATTaGCTGTGGTCTGTACAACAG +
Preference number: 4 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKGQSWH*LWSVQQ
Trigger: CTGTTGTACAGACCACAGGCAATGCCAGGATTGTCC...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp CCAGTTCCTAGTCCTGCTTTCTGTAGCTGTAGGTATCAGTATAGTTGGCTAAGAGGACAATCCTGGCATTaGCTGTGGTCTGTACAACAG +
Preference number: 4 (lower is better)
Translates to: PVPSPAFCSCRYQYSWLRGQSWH*LWSVQQ
Trigger: CTGTTGTACAGACCACAGGCAATGCCAGGATTGTCC...TCTTAGCCAACTATACTGATACCTACAGCTACAGAAAGCAGGACTAGGAACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp AACAATTCAGCTCAAACTCTTGGCATTATGATCATCCTTTTCCTAACATGTGTACAGCACTGCCTGGTCTaGAATGAGTGGGGCGGAGCG +
Preference number: 4 (lower is better)
Translates to: NNSAQTLGIMIILFLTCVQHCLV*NEWGGA
Trigger: CGCTCCGCCCCACTCATTGCAGACCAGGCAGTGCTG...TACACATGTTAGGAAAAGGATGATCATAATGCCAAGAGTTTGAGCTGAATTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475381.7
CDS-3UTR GCA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGCCTCTACGGTGTCCTTaGAAAGTGTGGCAGTCACTA +
Preference number: 4 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKPLRCP*KVWQSL
Trigger: TAGTGACTGCCACACTTTGCAAGGACACCGTAGAGG...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp AACAATTCAGCTCAAACTCTTGGCATTATGATCATCCTTTTCCTAACATGTGTAGGCTCGCCAGCGGGCTaGCAAAGAGGAAAGGGCGAT +
Preference number: 4 (lower is better)
Translates to: NNSAQTLGIMIILFLTCVGSPAG*QRGKGD
Trigger: ATCGCCCTTTCCTCTTTGCCAGCCCGCTGGCGAGCC...TACACATGTTAGGAAAAGGATGATCATAATGCCAAGAGTTTGAGCTGAATTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475381.7
CDS-3UTR CCA 90 bp ACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGACAATGCAAATTCTGCCTaGATCAACCATATACTTCTG +
Preference number: 4 (lower is better)
Translates to: TRCQCTPFTQNMSLCSSDNANSA*INHILL
Trigger: CAGAAGTATATGGTTGATCCAGGCAGAATTTGCATT...GTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp CAACACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCAATGCAAATTCTGCCTaGATCAACCATATACTTCTG +
Preference number: 4 (lower is better)
Translates to: QHQVPVYALHSEHELVFLNANSA*INHILL
Trigger: CAGAAGTATATGGTTGATCCAGGCAGAATTTGCATT...GAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp CCAGTTCCTAGTCCTGCTTTCTGTAGCTGTAGGTATCAGTATAGTTGGCTAAGATCCTGGCATTGCCTGTaGTCTGTACAACAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: PVPSPAFCSCRYQYSWLRSWHCL*SVQQAC
Trigger: ACAAGCCTGTTGTACAGACCACAGGCAATGCCAGGA...TCTTAGCCAACTATACTGATACCTACAGCTACAGAAAGCAGGACTAGGAACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGTCCTGGCATTGCCTGTaGTCTGTACAACAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKSWHCL*SVQQAC
Trigger: ACAAGCCTGTTGTACAGACCACAGGCAATGCCAGGA...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp GGCTTTTATGAATATTCTAGCCAGTCCAAAGGAGGGCAACACATACTGTATCCACAGAATGTAGGTCTTTaGGAGGAGCTGCAGCACTGC +
Preference number: 4 (lower is better)
Translates to: GFYEYSSQSKGGQHILYPQNVGL*EELQHC
Trigger: GCAGTGCTGCAGCTCCTCCCAAAGACCTACATTCTG...TGGATACAGTATGTGTTGCCCTCCTTTGGACTGGCTAGAATATTCATAAAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475381.7
CDS-3UTR CCA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGGGGGCTCGAGGCTTCTaGAAGTTTTGCTCCTTTACA +
Preference number: 4 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKGARGF*KFCSFT
Trigger: TGTAAAGGAGCAAAACTTCCAGAAGCCTCGAGCCCC...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp CCAGTTCCTAGTCCTGCTTTCTGTAGCTGTAGGTATCAGTATAGTTGGCTAAGAGGGGCTCGAGGCTTCTaGAAGTTTTGCTCCTTTACA +
Preference number: 4 (lower is better)
Translates to: PVPSPAFCSCRYQYSWLRGARGF*KFCSFT
Trigger: TGTAAAGGAGCAAAACTTCCAGAAGCCTCGAGCCCC...TCTTAGCCAACTATACTGATACCTACAGCTACAGAAAGCAGGACTAGGAACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp CAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTCAAGAACAGAGAGATTaGCCCACTCTGGGAACCAAA +
Preference number: 4 (lower is better)
Translates to: QEGRQRSSTQITIGVSCCQEQRD*PTLGTK
Trigger: TTTGGTTCCCAGAGTGGGCCAATCTCTCTGTTCTTG...ACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp CAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTTTTCGTTGCTGGAAGTaGGAAATACCCCATCTTCCC +
Preference number: 4 (lower is better)
Translates to: QEGRQRSSTQITIGVSCCFRCWK*EIPHLP
Trigger: GGGAAGATGGGGTATTTCCCACTTCCAGCAACGAAA...ACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp GGACGGCAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTTGTTATTTCGTTGCTaGAAGTGGGAAATACCCCAT +
Preference number: 4 (lower is better)
Translates to: GRQEGRQRSSTQITIGVSLLFRC*KWEIPH
Trigger: ATGGGGTATTTCCCACTTCCAGCAACGAAATAACAA...AGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTGCCGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp CAACACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCAGTTGGTATTATAAGTaGAAGAGACCTCAAGGATCA +
Preference number: 4 (lower is better)
Translates to: QHQVPVYALHSEHELVFLSWYYK*KRPQGS
Trigger: TGATCCTTGAGGTCTCTTCCACTTATAATACCAACT...GAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGGGGGAAAATGCCAATTaGAGGAACCCTGCCTATACA +
Preference number: 4 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKGENAN*RNPAYT
Trigger: TGTATAGGCAGGGTTCCTTCAATTGGCATTTTCCCC...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp CAACACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCATTGTTAACGATCATTaGCTGCACAAAGTCATAGTT +
Preference number: 4 (lower is better)
Translates to: QHQVPVYALHSEHELVFLIVNDH*LHKVIV
Trigger: AACTATGACTTTGTGCAGGCAATGATCGTTAACAAT...GAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp AAATTCTGCCTGGATCAACCATATACTTCTGTAAGACTTCTGGCTTCAGGAAATTCTGCCCGCGGCAGCTaGTCATTCACGCGTTTCTTA +
Preference number: 4 (lower is better)
Translates to: KFCLDQPYTSVRLLASGNSARGS*SFTRFL
Trigger: TAAGAAACGCGTGAATGAGCAGCTGCCGCGGGCAGA...ATTTCCTGAAGCCAGAAGTCTTACAGAAGTATATGGTTGATCCAGGCAGAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421723.2
CDS-3UTR GCA 90 bp TTCTGGCTTCAGGAAATACTTTGTGGCCCGTACAACATCATGAATTTGCTCAGGATACCTGATTTCACTTaGTGTGCACCCCGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: FWLQEILCGPYNIMNLLRIPDFT*CAPRKV
Trigger: CACTTTCCGGGGTGCACAGCAAGTGAAATCAGGTAT...CCTGAGCAAATTCATGATGTTGTACGGGCCACAAAGTATTTCCTGAAGCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421723.2
CDS-3UTR GCA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGACTTTCTCTCCGTGGTaGCCTGTATCATTACTCAGC +
Preference number: 4 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKTFSPW*PVSLLS
Trigger: GCTGAGTAATGATACAGGGCACCACGGAGAGAAAGT...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp GGACGGCAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTGAATCATTTGCTGTCTaGAATTACTATAGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: GRQEGRQRSSTQITIGVSESFAV*NYYRLW
Trigger: CCAAAGCCTATAGTAATTGCAGACAGCAAATGATTC...AGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTGCCGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp TTGAGTAAACTGTTGTCCAAGGGCAGCAGCCAGATTTCCACCAGCACTGTCACCAATGCAAATTCTGCCTaGATCAACCATATACTTCTG +
Preference number: 4 (lower is better)
Translates to: LSKLLSKGSSQISTSTVTNANSA*INHILL
Trigger: CAGAAGTATATGGTTGATCCAGGCAGAATTTGCATT...GGTGACAGTGCTGGTGGAAATCTGGCTGCTGCCCTTGGACAACAGTTTACTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421723.2
CDS-3UTR CCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACAGCTCCTGGACAATCCTaGCATTGCCTGTGGTCTGTA +
Preference number: 4 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTAPGQS*HCLWSV
Trigger: TACAGACCACAGGCAATGCCAGGATTGTCCAGGAGC...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp GGCTTTTATGAATATTCTAGCCAGTCCAAAGGAGGGCAACACATACTGTATCCAGGGGCTCGAGGCTTCTaGAAGTTTTGCTCCTTTACA +
Preference number: 4 (lower is better)
Translates to: GFYEYSSQSKGGQHILYPGARGF*KFCSFT
Trigger: TGTAAAGGAGCAAAACTTCCAGAAGCCTCGAGCCCC...TGGATACAGTATGTGTTGCCCTCCTTTGGACTGGCTAGAATATTCATAAAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475381.7
CDS-3UTR CCA 90 bp CCAGTTCCTAGTCCTGCTTTCTGTAGCTGTAGGTATCAGTATAGTTGGCTAAGATTTCGTTGCTGGAAGTaGGAAATACCCCATCTTCCC +
Preference number: 4 (lower is better)
Translates to: PVPSPAFCSCRYQYSWLRFRCWK*EIPHLP
Trigger: GGGAAGATGGGGTATTTCCCACTTCCAGCAACGAAA...TCTTAGCCAACTATACTGATACCTACAGCTACAGAAAGCAGGACTAGGAACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp CAACACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTTCAGCTCAAACTCTTaGCATTATGATCATCCTTTT +
Preference number: 4 (lower is better)
Translates to: QHQVPVYALHSEHELVFLFSSNS*HYDHPF
Trigger: AAAAGGATGATCATAATGCCAAGAGTTTGAGCTGAA...GAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475381.7
3UTR CAA 72 bp AGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATaGGAGTGTCTTGTTGTGTCAAAGATGTTCCCACTG +
Preference number: 4 (lower is better)
Translates to: RKAGRDPQLKSQ*ECLVVSKMFPL
Trigger: CAGTGGGAACATCTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGTTTAGGCTGGCATCTTaGGTAAACTGTTGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKFRLAS*VNCCPR
Trigger: CCTTGGACAACAGTTTACTCAAGATGCCAGCCTAAA...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp CCAGTTCCTAGTCCTGCTTTCTGTAGCTGTAGGTATCAGTATAGTTGGCTAAGATTTAGGCTGGCATCTTaGGTAAACTGTTGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: PVPSPAFCSCRYQYSWLRFRLAS*VNCCPR
Trigger: CCTTGGACAACAGTTTACTCAAGATGCCAGCCTAAA...TCTTAGCCAACTATACTGATACCTACAGCTACAGAAAGCAGGACTAGGAACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp CAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTAGTCATAGTTGCCTTTaGAGTAGTCCACCCAATACT +
Preference number: 4 (lower is better)
Translates to: QEGRQRSSTQITIGVSCCSHSCL*SSPPNT
Trigger: AGTATTGGGTGGACTACTTCAAAGGCAACTATGACT...ACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACAGCTTGTAGTTCTTTGTaGAGGATGCAGGCAAGAGGG +
Preference number: 4 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTACSSL*RMQARG
Trigger: CCCTCTTGCCTGCATCCTTCACAAAGAACTACAAGC...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp CAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTTTAAAGGTCACTCTATaGTCCAGAGCTGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: QEGRQRSSTQITIGVSCCLKVTL*SRAGRT
Trigger: AGTTCTTCCAGCTCTGGATCATAGAGTGACCTTTAA...ACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp CAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTCCTTGCCTAAGCTACTaGACTATAAACCTAGATGAC +
Preference number: 4 (lower is better)
Translates to: QEGRQRSSTQITIGVSCCPCLSY*TINLDD
Trigger: GTCATCTAGGTTTATAGTTCAGTAGCTTAGGCAAGG...ACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACATTAAGCTTGGGCTGTTaGAACTTCCAGACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTLSLGC*NFQTWL
Trigger: CAGCCAGGTCTGGAAGTTTCAACAGCCCAAGCTTAA...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp CCAGTTCCTAGTCCTGCTTTCTGTAGCTGTAGGTATCAGTATAGTTGGCTAAGACCATCTTCCCAGGAGTaGAATGGTTCTACTTTCTCT +
Preference number: 4 (lower is better)
Translates to: PVPSPAFCSCRYQYSWLRPSSQE*NGSTFS
Trigger: AGAGAAAGTAGAACCATTTCACTCCTGGGAAGATGG...TCTTAGCCAACTATACTGATACCTACAGCTACAGAAAGCAGGACTAGGAACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACAATCAGGTTACTCACTTaGTGTGCACCCCGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTIRLLT*CAPRKV
Trigger: CACTTTCCGGGGTGCACAGCAAGTGAGTAACCTGAT...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475381.7
ENST00000538775.5
CDS-3UTR GCA 90 bp CCAGTTCCTAGTCCTGCTTTCTGTAGCTGTAGGTATCAGTATAGTTGGCTAAGACAATTCTGGGGAAAATaGCAATTGAAGGAACCCTGC +
Preference number: 4 (lower is better)
Translates to: PVPSPAFCSCRYQYSWLRQFWGK*QLKEPC
Trigger: GCAGGGTTCCTTCAATTGGCATTTTCCCCAGAATTG...TCTTAGCCAACTATACTGATACCTACAGCTACAGAAAGCAGGACTAGGAACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp GGCTTTTATGAATATTCTAGCCAGTCCAAAGGAGGGCAACACATACTGTATCCACAAGAACAGAGAGATTaGCCCACTCTGGGAACCAAA +
Preference number: 4 (lower is better)
Translates to: GFYEYSSQSKGGQHILYPQEQRD*PTLGTK
Trigger: TTTGGTTCCCAGAGTGGGCCAATCTCTCTGTTCTTG...TGGATACAGTATGTGTTGCCCTCCTTTGGACTGGCTAGAATATTCATAAAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475381.7
CDS-3UTR CCA 90 bp GGACGGCAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTATTCACACTGCTCTTaGTACTTTATGTCAGAAGTA +
Preference number: 4 (lower is better)
Translates to: GRQEGRQRSSTQITIGVSYSHCS*YFMSEV
Trigger: TACTTCTGACATAAAGTACCAAGAGCAGTGTGAATA...AGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTGCCGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp CCAGTTCCTAGTCCTGCTTTCTGTAGCTGTAGGTATCAGTATAGTTGGCTAAGATTCCCAGGAGTGAAATaGTTCTACTTTCTCTCCGTG +
Preference number: 4 (lower is better)
Translates to: PVPSPAFCSCRYQYSWLRFPGVK*FYFLSV
Trigger: CACGGAGAGAAAGTAGAACCATTTCACTCCTGGGAA...TCTTAGCCAACTATACTGATACCTACAGCTACAGAAAGCAGGACTAGGAACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp CAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTACATCAAGTGAAGTGTaGTTGTTAACGATCATTGCC +
Preference number: 4 (lower is better)
Translates to: QEGRQRSSTQITIGVSCCTSSEV*LLTIIA
Trigger: GGCAATGATCGTTAACAATCACACTTCACTTGATGT...ACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGTTAAAGGTCACTCTATaGTCCAGAGCTGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKLKVTL*SRAGRT
Trigger: AGTTCTTCCAGCTCTGGATCATAGAGTGACCTTTAA...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp CCAGTTCCTAGTCCTGCTTTCTGTAGCTGTAGGTATCAGTATAGTTGGCTAAGATTAAAGGTCACTCTATaGTCCAGAGCTGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: PVPSPAFCSCRYQYSWLRLKVTL*SRAGRT
Trigger: AGTTCTTCCAGCTCTGGATCATAGAGTGACCTTTAA...TCTTAGCCAACTATACTGATACCTACAGCTACAGAAAGCAGGACTAGGAACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp CCAGTTCCTAGTCCTGCTTTCTGTAGCTGTAGGTATCAGTATAGTTGGCTAAGACCTTGCCTAAGCTACTaGACTATAAACCTAGATGAC +
Preference number: 4 (lower is better)
Translates to: PVPSPAFCSCRYQYSWLRPCLSY*TINLDD
Trigger: GTCATCTAGGTTTATAGTTCAGTAGCTTAGGCAAGG...TCTTAGCCAACTATACTGATACCTACAGCTACAGAAAGCAGGACTAGGAACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp CCAGTTCCTAGTCCTGCTTTCTGTAGCTGTAGGTATCAGTATAGTTGGCTAAGAAATGATAAAATTCAGTaGCAGCAGGTGATGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PVPSPAFCSCRYQYSWLRNDKIQ*QQVMAQ
Trigger: CTGAGCCATCACCTGCTGGCACTGAATTTTATCATT...TCTTAGCCAACTATACTGATACCTACAGCTACAGAAAGCAGGACTAGGAACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475381.7
ENST00000538775.5
CDS-3UTR GCA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGAGATGGGAAGTGGCTTaGCTAAGTACATTAGCAAGT +
Preference number: 4 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKRWEVA*LSTLAS
Trigger: ACTTGCTAATGTACTTAGGCAAGCCACTTCCCATCT...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp CAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGAGGCCAATATAATTTaGCAGTCTGACAAGACAGTT +
Preference number: 4 (lower is better)
Translates to: QEGRQRSSTQITIGVSCCEANII*QSDKTV
Trigger: AACTGTCTTGTCAGACTGGCAAATTATATTGGCCTC...ACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp CAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTTTCAGAATAGATAGATaGTTTGCTACCTCCACACTG +
Preference number: 4 (lower is better)
Translates to: QEGRQRSSTQITIGVSCCFRIDR*FATSTL
Trigger: CAGTGTGGAGGTAGCAAAGCATCTATCTATTCTGAA...ACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp CAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTTCAGGAAATACTTTGTaGCCCGTACAACATCATGAA +
Preference number: 4 (lower is better)
Translates to: QEGRQRSSTQITIGVSCCSGNTL*PVQHHE
Trigger: TTCATGATGTTGTACGGGCCACAAAGTATTTCCTGA...ACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp GGCTTTTATGAATATTCTAGCCAGTCCAAAGGAGGGCAACACATACTGTATCCAGCAAGTAGAGGGGAATaGGAGGAAGAATTAGTCAAC +
Preference number: 4 (lower is better)
Translates to: GFYEYSSQSKGGQHILYPASRGE*EEELVN
Trigger: GTTGACTAATTCTTCCTCCCATTCCCCTCTACTTGC...TGGATACAGTATGTGTTGCCCTCCTTTGGACTGGCTAGAATATTCATAAAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475381.7
CDS-3UTR CCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACATTTCGTTGCTGGAAGTaGGAAATACCCCATCTTCCC +
Preference number: 4 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTFRCWK*EIPHLP
Trigger: GGGAAGATGGGGTATTTCCCACTTCCAGCAACGAAA...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGCTCTTCCACATCAAGTaGAGTGTGATTGTTAACGAT +
Preference number: 4 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKLFHIK*SVIVND
Trigger: ATCGTTAACAATCACACTTCACTTGATGTGGAAGAG...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp CCAGTTCCTAGTCCTGCTTTCTGTAGCTGTAGGTATCAGTATAGTTGGCTAAGACTCTTCCACATCAAGTaGAGTGTGATTGTTAACGAT +
Preference number: 4 (lower is better)
Translates to: PVPSPAFCSCRYQYSWLRLFHIK*SVIVND
Trigger: ATCGTTAACAATCACACTTCACTTGATGTGGAAGAG...TCTTAGCCAACTATACTGATACCTACAGCTACAGAAAGCAGGACTAGGAACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR TCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACATCCCCAGTACTGACCTaGAAGTGCACGCATTTAATA +
Preference number: 4 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTSPVLT*KCTHLI
Trigger: TATTAAATGCGTGCACTTTCAGGTCAGTACTGGGGA...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGGGCTTCTGGAAGTTTTaGTCCTTTACAGGTTTTGAT +
Preference number: 4 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKGFWKF*SFTGFD
Trigger: ATCAAAACCTGTAAAGGAGCAAAACTTCCAGAAGCC...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp CCAGTTCCTAGTCCTGCTTTCTGTAGCTGTAGGTATCAGTATAGTTGGCTAAGACATTTGTTATTTCGTTaGTGGAAGTGGGAAATACCC +
Preference number: 4 (lower is better)
Translates to: PVPSPAFCSCRYQYSWLRHLLFR*WKWEIP
Trigger: GGGTATTTCCCACTTCCAGCAACGAAATAACAAATG...TCTTAGCCAACTATACTGATACCTACAGCTACAGAAAGCAGGACTAGGAACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp CCAGTTCCTAGTCCTGCTTTCTGTAGCTGTAGGTATCAGTATAGTTGGCTAAGAGAGGCCAATATAATTTaGCAGTCTGACAAGACAGTT +
Preference number: 4 (lower is better)
Translates to: PVPSPAFCSCRYQYSWLREANII*QSDKTV
Trigger: AACTGTCTTGTCAGACTGGCAAATTATATTGGCCTC...TCTTAGCCAACTATACTGATACCTACAGCTACAGAAAGCAGGACTAGGAACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGTTCAGAATAGATAGATaGTTTGCTACCTCCACACTG +
Preference number: 4 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKFRIDR*FATSTL
Trigger: CAGTGTGGAGGTAGCAAAGCATCTATCTATTCTGAA...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACAGCAAGTAGAGGGGAATaGGAGGAAGAATTAGTCAAC +
Preference number: 4 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTASRGE*EEELVN
Trigger: GTTGACTAATTCTTCCTCCCATTCCCCTCTACTTGC...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp CCAGTTCCTAGTCCTGCTTTCTGTAGCTGTAGGTATCAGTATAGTTGGCTAAGATTTGGCTCACAATTCTaGGGAAAATGCCAATTGAAG +
Preference number: 4 (lower is better)
Translates to: PVPSPAFCSCRYQYSWLRFGSQF*GKCQLK
Trigger: CTTCAATTGGCATTTTCCCCAGAATTGTGAGCCAAA...TCTTAGCCAACTATACTGATACCTACAGCTACAGAAAGCAGGACTAGGAACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGTTGTGGCTGGCAATTTaGCATACAGAAAGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKLWLAI*HTERRE
Trigger: TTCTCTTCTTTCTGTATGCCAAATTGCCAGCCACAA...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475381.7
CDS-3UTR TCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACAGCTCATCATAATACCTaGTTTCATCTGAAGGTGACC +
Preference number: 4 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTAHHNT*FHLKVT
Trigger: GGTCACCTTCAGATGAAATCAGGTATTATGATGAGC...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538775.5
CDS-3UTR TCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACAAGTCATAGTTGCCTTTaGAGTAGTCCACCCAATACT +
Preference number: 4 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTSHSCL*SSPPNT
Trigger: AGTATTGGGTGGACTACTTCAAAGGCAACTATGACT...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp AACAATTCAGCTCAAACTCTTGGCATTATGATCATCCTTTTCCTAACATGTGTAATCAGGTTACTCACTTaGTGTGCACCCCGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: NNSAQTLGIMIILFLTCVIRLLT*CAPRKV
Trigger: CACTTTCCGGGGTGCACAGCAAGTGAGTAACCTGAT...TACACATGTTAGGAAAAGGATGATCATAATGCCAAGAGTTTGAGCTGAATTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475381.7
CDS-3UTR GCA 90 bp CAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTCAAGTATATTCACACTaGTCTTGGTACTTTATGTCA +
Preference number: 4 (lower is better)
Translates to: QEGRQRSSTQITIGVSCCQVYSH*SWYFMS
Trigger: TGACATAAAGTACCAAGAGCAGTGTGAATATACTTG...ACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp AGACTTCTGGCTTCAGGAAATACTTTGTGGCCCGTACAACATCATGAATTTGCTTCAGGAAATACTTTGTaGCCCGTACAACATCATGAA +
Preference number: 4 (lower is better)
Translates to: RLLASGNTLWPVQHHEFASGNTL*PVQHHE
Trigger: TTCATGATGTTGTACGGGCCACAAAGTATTTCCTGA...AGCAAATTCATGATGTTGTACGGGCCACAAAGTATTTCCTGAAGCCAGAAGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421723.2
CDS-3UTR CCA 90 bp CAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTATAAGGTCCAAATATTaGTTCCTTCAAATGGTGTCA +
Preference number: 4 (lower is better)
Translates to: QEGRQRSSTQITIGVSCCIRSKY*FLQMVS
Trigger: TGACACCATTTGAAGGAACCAATATTTGGACCTTAT...ACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp ATGCAAATTCTGCCTGGATCAACCATATACTTCTGTAAGACTTCTGGCTTCAGGCAGAAATGCAAATTCTaGCTGGATCAACCATATACT +
Preference number: 4 (lower is better)
Translates to: MQILPGSTIYFCKTSGFRQKCKF*LDQPYT
Trigger: AGTATATGGTTGATCCAGGCAGAATTTGCATTTCTG...CCTGAAGCCAGAAGTCTTACAGAAGTATATGGTTGATCCAGGCAGAATTTGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421723.2
CDS-3UTR GCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACAGGCTTCTGGAAGTTTTaGTCCTTTACAGGTTTTGAT +
Preference number: 4 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTGFWKF*SFTGFD
Trigger: ATCAAAACCTGTAAAGGAGCAAAACTTCCAGAAGCC...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACACATTTGTTATTTCGTTaGTGGAAGTGGGAAATACCC +
Preference number: 4 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTHLLFR*WKWEIP
Trigger: GGGTATTTCCCACTTCCAGCAACGAAATAACAAATG...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACAGAGGCCAATATAATTTaGCAGTCTGACAAGACAGTT +
Preference number: 4 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTEANII*QSDKTV
Trigger: AACTGTCTTGTCAGACTGGCAAATTATATTGGCCTC...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACATCAGGAAATACTTTGTaGCCCGTACAACATCATGAA +
Preference number: 4 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTSGNTL*PVQHHE
Trigger: TTCATGATGTTGTACGGGCCACAAAGTATTTCCTGA...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp CCAGTTCCTAGTCCTGCTTTCTGTAGCTGTAGGTATCAGTATAGTTGGCTAAGATATTCACACTGCTCTTaGTACTTTATGTCAGAAGTA +
Preference number: 4 (lower is better)
Translates to: PVPSPAFCSCRYQYSWLRYSHCS*YFMSEV
Trigger: TACTTCTGACATAAAGTACCAAGAGCAGTGTGAATA...TCTTAGCCAACTATACTGATACCTACAGCTACAGAAAGCAGGACTAGGAACTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACATTTGGCTCACAATTCTaGGGAAAATGCCAATTGAAG +
Preference number: 4 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTFGSQF*GKCQLK
Trigger: CTTCAATTGGCATTTTCCCCAGAATTGTGAGCCAAA...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACAGGAAAGAATTGTGGCTaGCAATTTGGCATACAGAAA +
Preference number: 4 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTGKNCG*QFGIQK
Trigger: TTTCTGTATGCCAAATTGCCAGCCACAATTCTTTCC...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475381.7
3UTR CAA 72 bp TATACTTCTGTAAGACTTCTGGCTTCAGGAAATACTTaGTGGCCCGTACAACATCATGAATTTGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: YTSVRLLASGNT*WPVQHHEFAQE
Trigger: TTCCTGAGCAAATTCATGATGTTGTACGGGCCACAAAGTATTTCCTGAAGCCAGAAGTCTTACAGAAGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421723.2
CDS-3UTR TCA 90 bp AACAATTCAGCTCAAACTCTTGGCATTATGATCATCCTTTTCCTAACATGTGTAATGACAAGGTCAGTTTaGGAACCTGCCTTCAGTGAT +
Preference number: 4 (lower is better)
Translates to: NNSAQTLGIMIILFLTCVMTRSV*EPAFSD
Trigger: ATCACTGAAGGCAGGTTCTCAAACTGACCTTGTCAT...TACACATGTTAGGAAAAGGATGATCATAATGCCAAGAGTTTGAGCTGAATTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475381.7
CDS-3UTR GCA 90 bp AACAATTCAGCTCAAACTCTTGGCATTATGATCATCCTTTTCCTAACATGTGTAATAATACCTGATTTTTaGACTTGCCAAGGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: NNSAQTLGIMIILFLTCVIIPDF*TCQGPA
Trigger: GGCTGGGCCTTGGCAAGTGCAAAAATCAGGTATTAT...TACACATGTTAGGAAAAGGATGATCATAATGCCAAGAGTTTGAGCTGAATTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475381.7
CDS-3UTR GCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACAGAATCATTTGCTGTCTaGAATTACTATAGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTESFAV*NYYRLW
Trigger: CCAAAGCCTATAGTAATTGCAGACAGCAAATGATTC...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACAAGTTGGTATTATAAGTaGAAGAGACCTCAAGGATCA +
Preference number: 4 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTSWYYK*KRPQGS
Trigger: TGATCCTTGAGGTCTCTTCCACTTATAATACCAACT...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACAATTGTTAACGATCATTaGCTGCACAAAGTCATAGTT +
Preference number: 4 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTIVNDH*LHKVIV
Trigger: AACTATGACTTTGTGCAGGCAATGATCGTTAACAAT...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR GCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACACAAGTATATTCACACTaGTCTTGGTACTTTATGTCA +
Preference number: 4 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTQVYSH*SWYFMS
Trigger: TGACATAAAGTACCAAGAGCAGTGTGAATATACTTG...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CCA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACAATAAGGTCCAAATATTaGTTCCTTCAAATGGTGTCA +
Preference number: 4 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTIRSKY*FLQMVS
Trigger: TGACACCATTTGAAGGAACCAATATTTGGACCTTAT...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS TCA 90 bp GCAGCGGGATGTAGACGTAATAGGCGGCCAGCGCCACCAGGGCGGTaGGCAGGACACAGGACGACCTCATCTTGCCCTGGCTCGGCTCGC +
Preference number: 5 (lower is better)
Translates to: AAGCRRNRRPAPPGR*AGHRTTSSCPGSAR
Trigger: GCGAGCCGAGCCAGGGCAAGATGAGGTCGTCCTGTGTCCTGCTCACCGCCCTGGTGGCGCTGGCCGCCTATTACGTCTACATCCCGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421723.2
ENST00000424772.2
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS CCA 90 bp GCCACCAGGGCGGTGAGCAGGACACAGGACGACCTCATCTTGCCCTaGCTCGGCTCGCCAGCGGGCTGGCAAAGAGGAAAGGGCGATACC +
Preference number: 5 (lower is better)
Translates to: ATRAVSRTQDDLILP*LGSPAGWQRGKGDT
Trigger: GGTATCGCCCTTTCCTCTTTGCCAGCCCGCTGGCGAGCCGAGCCAGGGCAAGATGAGGTCGTCCTGTGTCCTGCTCACCGCCCTGGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421723.2
ENST00000424772.2
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS CCA 90 bp ACACAGGACGACCTCATCTTGCCCTGGCTCGGCTCGCCAGCGGGCTaGCAAAGAGGAAAGGGCGATACCACCCGGAGACCTCCGGCAACT +
Preference number: 5 (lower is better)
Translates to: TQDDLILPWLGSPAG*QRGKGDTTRRPPAT
Trigger: AGTTGCCGGAGGTCTCCGGGTGGTATCGCCCTTTCCTCTTTGCCAGCCCGCTGGCGAGCCGAGCCAGGGCAAGATGAGGTCGTCCTGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421723.2
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS GCA 90 bp GGAGCCAATCAGAGGCTGCGTCGGGAGGAAGTTGGAGCGCGGACATaGCCCCTCTACGGTGTCCTTGCAAAGTGTGGCAGTCACTACAGG +
Preference number: 5 (lower is better)
Translates to: GANQRLRREEVGART*PLYGVLAKCGSHYR
Trigger: CCTGTAGTGACTGCCACACTTTGCAAGGACACCGTAGAGGGGGCATGTCCGCGCTCCAACTTCCTCCCGACGCAGCCTCTGATTGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538775.5
ENST00000543711.5
CDS CCA 90 bp CCAGGTAGTGGATCAGGTTACTCACTTGCTGTGCACCCCGGAAAGTaGCGTCCAGCAGCATCAGCTTCCAGGGGTCGGACACGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: PGSGSGYSLAVHPGK*RPAASASRGRTRSQ
Trigger: CTGGCTCCGTGTCCGACCCCTGGAAGCTGATGCTGCTGGACGCCACTTTCCGGGGTGCACAGCAAGTGAGTAACCTGATCCACTACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424772.2
ENST00000475381.7
ENST00000538775.5
CDS GCA 90 bp CGTCAGAATGTAGGTCTTTGGGAGGAGCTGCAGCACTGCCTGGTCTaGAATGAGTGGGGCGGAGCGGGCATCCAGCAACTGAGGAAGCTC +
Preference number: 5 (lower is better)
Translates to: RQNVGLWEELQHCLV*NEWGGAGIQQLRKL
Trigger: GAGCTTCCTCAGTTGCTGGATGCCCGCTCCGCCCCACTCATTGCAGACCAGGCAGTGCTGCAGCTCCTCCCAAAGACCTACATTCTGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS TCA 90 bp ACTGCCTGGTCTGCAATGAGTGGGGCGGAGCGGGCATCCAGCAACTaGGGAAGCTCCTGGACAATCCTGGCATTGCCTGTGGTCTGTACA +
Preference number: 5 (lower is better)
Translates to: TAWSAMSGAERASSN*GSSWTILALPVVCT
Trigger: TGTACAGACCACAGGCAATGCCAGGATTGTCCAGGAGCTTCCTCAGTTGCTGGATGCCCGCTCCGCCCCACTCATTGCAGACCAGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS GCA 90 bp ATGCTCACACGTCAGAATGTAGGTCTTTGGGAGGAGCTGCAGCACTaGCTGGTCTGCAATGAGTGGGGCGGAGCGGGCATCCAGCAACTG +
Preference number: 5 (lower is better)
Translates to: MLTRQNVGLWEELQH*LVCNEWGGAGIQQL
Trigger: CAGTTGCTGGATGCCCGCTCCGCCCCACTCATTGCAGACCAGGCAGTGCTGCAGCTCCTCCCAAAGACCTACATTCTGACGTGTGAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS CCA 90 bp TCTTATAAGCCCAGGAGCCAATCAGAGGCTGCGTCGGGAGGAAGTTaGAGCGCGGACATGCCCCCTCTACGGTGTCCTTGCAAAGTGTGG +
Preference number: 5 (lower is better)
Translates to: SYKPRSQSEAASGGS*SADMPPLRCPCKVW
Trigger: CCACACTTTGCAAGGACACCGTAGAGGGGGCATGTCCGCGCTCCAACTTCCTCCCGACGCAGCCTCTGATTGGCTCCTGGGCTTATAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp ACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGACCAGGACGACCTCATCTaGCCCTGGCTCGGCTCGCCA +
Preference number: 5 (lower is better)
Translates to: TRCQCTPFTQNMSLCSSDQDDLI*PWLGSP
Trigger: TGGCGAGCCGAGCCAGGGCAAGATGAGGTCGTCCTG...GTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS GCA 90 bp TTGCACTTGCCAAGGCCCAGCCTCCTCCGTGGATATAAACGACGCTaGGTTTCAGTGGCTCTTCGGGCTTCGGAGGGCCTTCAAACACTC +
Preference number: 5 (lower is better)
Translates to: LHLPRPSLLRGYKRR*VSVALRASEGLQTL
Trigger: GAGTGTTTGAAGGCCCTCCGAAGCCCGAAGAGCCACTGAAACGCAGCGTCGTTTATATCCACGGAGGAGGCTGGGCCTTGGCAAGTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424772.2
ENST00000475381.7
ENST00000538775.5
CDS GCA 90 bp CAAAGAGGAAAGGGCGATACCACCCGGAGACCTCCGGCAACTTTCTaGCCGCGGCAGCTGCTCATTCACGCGTTTCTTATAAGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: QRGKGDTTRRPPATF*PRQLLIHAFLISPG
Trigger: TCCTGGGCTTATAAGAAACGCGTGAATGAGCAGCTGCCGCGGGCAGAAAGTTGCCGGAGGTCTCCGGGTGGTATCGCCCTTTCCTCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421723.2
ENST00000538775.5
ENST00000543711.5
CDS CCA 90 bp CAAGGCCCAGCCTCCTCCGTGGATATAAACGACGCTGCGTTTCAGTaGCTCTTCGGGCTTCGGAGGGCCTTCAAACACTCTGACTTCCAC +
Preference number: 5 (lower is better)
Translates to: QGPASSVDINDAAFQ*LFGLRRAFKHSDFH
Trigger: GTGGAAGTCAGAGTGTTTGAAGGCCCTCCGAAGCCCGAAGAGCCACTGAAACGCAGCGTCGTTTATATCCACGGAGGAGGCTGGGCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424772.2
ENST00000475381.7
ENST00000538775.5
CDS-3UTR CAA 90 bp GGACGGCAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTCAGGACGACCTCATCTaGCCCTGGCTCGGCTCGCCA +
Preference number: 5 (lower is better)
Translates to: GRQEGRQRSSTQITIGVSQDDLI*PWLGSP
Trigger: TGGCGAGCCGAGCCAGGGCAAGATGAGGTCGTCCTG...AGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTGCCGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp AAGGAGGAGATGGGGGATCTAGGCAACACCAGGTGCCAGTGTACGCCCTTCACTTCAGAATGTAGGTCTTaGGGAGGAGCTGCAGCACTG +
Preference number: 5 (lower is better)
Translates to: KEEMGDLGNTRCQCTPFTSECRS*GGAAAL
Trigger: CAGTGCTGCAGCTCCTCCCAAAGACCTACATTCTGA...AGTGAAGGGCGTACACTGGCACCTGGTGTTGCCTAGATCCCCCATCTCCTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp CAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTTGCGTCGGGAGGAAGTaGGAGCGCGGACATGCCCCC +
Preference number: 5 (lower is better)
Translates to: QEGRQRSSTQITIGVSCCCVGRK*ERGHAP
Trigger: GGGGGCATGTCCGCGCTCCAACTTCCTCCCGACGCA...ACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538775.5
ENST00000543711.5
CDS TCA 90 bp TGCGTTTCAGTGGCTCTTCGGGCTTCGGAGGGCCTTCAAACACTCTaGCTTCCACACCATCAAAGTCTGTGTCGGTCACCTTCACTTGGG +
Preference number: 5 (lower is better)
Translates to: CVSVALRASEGLQTL*LPHHQSLCRSPSLG
Trigger: CCCAAGTGAAGGTGACCGACACAGACTTTGATGGTGTGGAAGTCAGAGTGTTTGAAGGCCCTCCGAAGCCCGAAGAGCCACTGAAACGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424772.2
ENST00000475381.7
ENST00000538775.5
CDS-3UTR CAA 90 bp AAGGAGGAGATGGGGGATCTAGGCAACACCAGGTGCCAGTGTACGCCCTTCACTATCTTGAGTAAACTGTaGTCCAAGGGCAGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: KEEMGDLGNTRCQCTPFTILSKL*SKGSSQ
Trigger: CTGGCTGCTGCCCTTGGACAACAGTTTACTCAAGAT...AGTGAAGGGCGTACACTGGCACCTGGTGTTGCCTAGATCCCCCATCTCCTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp CAACACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCAAGACCAGAGGGTACTaGGTCCCCAGTACTGACCTG +
Preference number: 5 (lower is better)
Translates to: QHQVPVYALHSEHELVFLKTRGY*VPSTDL
Trigger: CAGGTCAGTACTGGGGACCAAGTACCCTCTGGTCTT...GAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp ACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGACGCAGTCACTACAGGTTaGAGGAAGGCTCTGTCGCTG +
Preference number: 5 (lower is better)
Translates to: TRCQCTPFTQNMSLCSSDAVTTG*RKALSL
Trigger: CAGCGACAGAGCCTTCCTCAAACCTGTAGTGACTGC...GTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGTGCGTCGGGAGGAAGTaGGAGCGCGGACATGCCCCC +
Preference number: 5 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKCVGRK*ERGHAP
Trigger: GGGGGCATGTCCGCGCTCCAACTTCCTCCCGACGCA...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp CAACACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCGATCAGGTTACTCACTaGCTGTGCACCCCGGAAAGT +
Preference number: 5 (lower is better)
Translates to: QHQVPVYALHSEHELVFLDQVTH*LCTPES
Trigger: ACTTTCCGGGGTGCACAGCAAGTGAGTAACCTGATC...GAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475381.7
ENST00000538775.5
CDS-3UTR CAA 90 bp CAACACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCGCACTCTCCAAACGCTaGGCATACATGATGCCATCG +
Preference number: 5 (lower is better)
Translates to: QHQVPVYALHSEHELVFLALSKR*AYMMPS
Trigger: CGATGGCATCATGTATGCCAAGCGTTTGGAGAGTGC...GAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp ACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGACGCACTCTCCAAACGCTaGGCATACATGATGCCATCG +
Preference number: 5 (lower is better)
Translates to: TRCQCTPFTQNMSLCSSDALSKR*AYMMPS
Trigger: CGATGGCATCATGTATGCCAAGCGTTTGGAGAGTGC...GTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp TGGCTTCAGGAAATACTTTGTGGCCCGTACAACATCATGAATTTGCTCAGGAAACAGGACGACCTCATCTaGCCCTGGCTCGGCTCGCCA +
Preference number: 5 (lower is better)
Translates to: WLQEILCGPYNIMNLLRKQDDLI*PWLGSP
Trigger: TGGCGAGCCGAGCCAGGGCAAGATGAGGTCGTCCTG...TTTCCTGAGCAAATTCATGATGTTGTACGGGCCACAAAGTATTTCCTGAAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421723.2
CDS-3UTR CAA 90 bp CAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCGGTCACCTTCACTaGGGCAGAAGACCACGCGCT +
Preference number: 5 (lower is better)
Translates to: QEGRQRSSTQITIGVSCCVGHLH*GRRPRA
Trigger: AGCGCGTGGTCTTCTGCCCAAGTGAAGGTGACCGAC...ACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475381.7
ENST00000538775.5
CDS-3UTR CAA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGGTGACCAGGACGCACTaGCACTTGCCAAGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKVTRTH*HLPRPS
Trigger: GCTGGGCCTTGGCAAGTGCAAGTGCGTCCTGGTCAC...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538775.5
CDS-3UTR CAA 90 bp ACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGACTGGACAATCCTGGCATaGCCTGTGGTCTGTACAACA +
Preference number: 5 (lower is better)
Translates to: TRCQCTPFTQNMSLCSSDWTILA*PVVCTT
Trigger: TGTTGTACAGACCACAGGCAATGCCAGGATTGTCCA...GTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp GGACGGCAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTCAGAATGTAGGTCTTaGGGAGGAGCTGCAGCACTG +
Preference number: 5 (lower is better)
Translates to: GRQEGRQRSSTQITIGVSSECRS*GGAAAL
Trigger: CAGTGCTGCAGCTCCTCCCAAAGACCTACATTCTGA...AGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTGCCGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp CAACACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCATTCCCACTGAGAAGTaGGTGGGCCAGCTAGTGAAA +
Preference number: 5 (lower is better)
Translates to: QHQVPVYALHSEHELVFLIPTEK*VGQLVK
Trigger: TTTCACTAGCTGGCCCACCAACTTCTCAGTGGGAAT...GAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp CAACACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCGTTAAGCTTGGGCTGTaGAAACTTCCAGACCTGGCT +
Preference number: 5 (lower is better)
Translates to: QHQVPVYALHSEHELVFLVKLGL*KLPDLA
Trigger: AGCCAGGTCTGGAAGTTTCAACAGCCCAAGCTTAAC...GAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp GGACGGCAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGGACAATCCTGGCATaGCCTGTGGTCTGTACAACA +
Preference number: 5 (lower is better)
Translates to: GRQEGRQRSSTQITIGVSWTILA*PVVCTT
Trigger: TGTTGTACAGACCACAGGCAATGCCAGGATTGTCCA...AGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTGCCGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp GGACGGCAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTGTTAAGCTTGGGCTGTaGAAACTTCCAGACCTGGCT +
Preference number: 5 (lower is better)
Translates to: GRQEGRQRSSTQITIGVSVKLGL*KLPDLA
Trigger: AGCCAGGTCTGGAAGTTTCAACAGCCCAAGCTTAAC...AGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTGCCGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp AAGGAGGAGATGGGGGATCTAGGCAACACCAGGTGCCAGTGTACGCCCTTCACTCAACTCAAATCACAATaGGAGTGTCTTGTTGTGTCA +
Preference number: 5 (lower is better)
Translates to: KEEMGDLGNTRCQCTPFTQLKSQ*ECLVVS
Trigger: TGACACAACAAGACACTCCAATTGTGATTTGAGTTG...AGTGAAGGGCGTACACTGGCACCTGGTGTTGCCTAGATCCCCCATCTCCTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp CAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTCCCTCTACGGTGTCCTaGCAAAGTGTGGCAGTCACT +
Preference number: 5 (lower is better)
Translates to: QEGRQRSSTQITIGVSCCPSTVS*QSVAVT
Trigger: AGTGACTGCCACACTTTGCAAGGACACCGTAGAGGG...ACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACAGTCGGTCACCTTCACTaGGGCAGAAGACCACGCGCT +
Preference number: 5 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTVGHLH*GRRPRA
Trigger: AGCGCGTGGTCTTCTGCCCAAGTGAAGGTGACCGAC...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475381.7
ENST00000538775.5
CDS-3UTR CAA 90 bp TTGAGTAAACTGTTGTCCAAGGGCAGCAGCCAGATTTCCACCAGCACTGTCACCGCTTCAGGAAATACTTaGTGGCCCGTACAACATCAT +
Preference number: 5 (lower is better)
Translates to: LSKLLSKGSSQISTSTVTASGNT*WPVQHH
Trigger: ATGATGTTGTACGGGCCACAAAGTATTTCCTGAAGC...GGTGACAGTGCTGGTGGAAATCTGGCTGCTGCCCTTGGACAACAGTTTACTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421723.2
CDS-3UTR CAA 90 bp ACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGACTGGGGTGTTCACATTTaGCTGATAAGATGGTGTGTT +
Preference number: 5 (lower is better)
Translates to: TRCQCTPFTQNMSLCSSDWGVHI*LIRWCV
Trigger: AACACACCATCTTATCAGCAAAATGTGAACACCCCA...GTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp CAACACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCAGTGATAGTGATGCTTaGGCTGAAACAATTCAGCTC +
Preference number: 5 (lower is better)
Translates to: QHQVPVYALHSEHELVFLSDSDA*AETIQL
Trigger: GAGCTGAATTGTTTCAGCCAAAGCATCACTATCACT...GAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475381.7
CDS-3UTR CAA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGGCAGTCACTACAGGTTaGAGGAAGGCTCTGTCGCTG +
Preference number: 5 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKAVTTG*RKALSL
Trigger: CAGCGACAGAGCCTTCCTCAAACCTGTAGTGACTGC...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp AACAATTCAGCTCAAACTCTTGGCATTATGATCATCCTTTTCCTAACATGTGTACAGGACGACCTCATCTaGCCCTGGCTCGGCTCGCCA +
Preference number: 5 (lower is better)
Translates to: NNSAQTLGIMIILFLTCVQDDLI*PWLGSP
Trigger: TGGCGAGCCGAGCCAGGGCAAGATGAGGTCGTCCTG...TACACATGTTAGGAAAAGGATGATCATAATGCCAAGAGTTTGAGCTGAATTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475381.7
CDS-3UTR CAA 90 bp CAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTATCTTGAGTAAACTGTaGTCCAAGGGCAGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: QEGRQRSSTQITIGVSCCILSKL*SKGSSQ
Trigger: CTGGCTGCTGCCCTTGGACAACAGTTTACTCAAGAT...ACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp CCAGTTCCTAGTCCTGCTTTCTGTAGCTGTAGGTATCAGTATAGTTGGCTAAGATCAGAATGTAGGTCTTaGGGAGGAGCTGCAGCACTG +
Preference number: 5 (lower is better)
Translates to: PVPSPAFCSCRYQYSWLRSECRS*GGAAAL
Trigger: CAGTGCTGCAGCTCCTCCCAAAGACCTACATTCTGA...TCTTAGCCAACTATACTGATACCTACAGCTACAGAAAGCAGGACTAGGAACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp CAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTATTCCCACTGAGAAGTaGGTGGGCCAGCTAGTGAAA +
Preference number: 5 (lower is better)
Translates to: QEGRQRSSTQITIGVSCCIPTEK*VGQLVK
Trigger: TTTCACTAGCTGGCCCACCAACTTCTCAGTGGGAAT...ACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp CAACACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCGAGGAAGAAAGTCCTTaGAGAAACTTGTTCTTTCCA +
Preference number: 5 (lower is better)
Translates to: QHQVPVYALHSEHELVFLEEESP*RNLFFP
Trigger: TGGAAAGAACAAGTTTCTCAAAGGACTTTCTTCCTC...GAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp ACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGACGAGGAAGAAAGTCCTTaGAGAAACTTGTTCTTTCCA +
Preference number: 5 (lower is better)
Translates to: TRCQCTPFTQNMSLCSSDEEESP*RNLFFP
Trigger: TGGAAAGAACAAGTTTCTCAAAGGACTTTCTTCCTC...GTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp GGACGGCAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTAATTGGAGTGTCTTGTaGTGTCAAAGATGTTCCCAC +
Preference number: 5 (lower is better)
Translates to: GRQEGRQRSSTQITIGVSNWSVL*CQRCSH
Trigger: GTGGGAACATCTTTGACACAACAAGACACTCCAATT...AGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTGCCGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp CAACACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCCAACTCAAATCACAATaGGAGTGTCTTGTTGTGTCA +
Preference number: 5 (lower is better)
Translates to: QHQVPVYALHSEHELVFLQLKSQ*ECLVVS
Trigger: TGACACAACAAGACACTCCAATTGTGATTTGAGTTG...GAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp ACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGACGAGATCCGGAATCATTaGCTGTCTGCAATTACTATA +
Preference number: 5 (lower is better)
Translates to: TRCQCTPFTQNMSLCSSDEIRNH*LSAITI
Trigger: TATAGTAATTGCAGACAGCAAATGATTCCGGATCTC...GTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp GGACGGCAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTAAGATTGGGAAAGAATaGTGGCTGGCAATTTGGCAT +
Preference number: 5 (lower is better)
Translates to: GRQEGRQRSSTQITIGVSKIGKE*WLAIWH
Trigger: ATGCCAAATTGCCAGCCACAATTCTTTCCCAATCTT...AGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTGCCGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475381.7
CDS-3UTR CAA 90 bp CCAGTTCCTAGTCCTGCTTTCTGTAGCTGTAGGTATCAGTATAGTTGGCTAAGAATCTTGAGTAAACTGTaGTCCAAGGGCAGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: PVPSPAFCSCRYQYSWLRILSKL*SKGSSQ
Trigger: CTGGCTGCTGCCCTTGGACAACAGTTTACTCAAGAT...TCTTAGCCAACTATACTGATACCTACAGCTACAGAAAGCAGGACTAGGAACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp ACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGACAGTCCTTTGAGAAACTaGTTCTTTCCAGAAAACCTT +
Preference number: 5 (lower is better)
Translates to: TRCQCTPFTQNMSLCSSDSPLRN*FFPENL
Trigger: AAGGTTTTCTGGAAAGAACAAGTTTCTCAAAGGACT...GTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp ACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGACGCATTGACTTCTGTTTaGTACATAAAATGCTACTGG +
Preference number: 5 (lower is better)
Translates to: TRCQCTPFTQNMSLCSSDALTSV*YIKCYW
Trigger: CCAGTAGCATTTTATGTACAAAACAGAAGTCAATGC...GTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp ACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCTGACAATAAGGTCCAAATATaGGTTCCTTCAAATGGTGTC +
Preference number: 5 (lower is better)
Translates to: TRCQCTPFTQNMSLCSSDNKVQI*VPSNGV
Trigger: GACACCATTTGAAGGAACCAATATTTGGACCTTATT...GTCAGAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp CAACACCAGGTGCCAGTGTACGCCCTTCACTCAGAACATGAGCTTGTGTTCCTCAATAAGGTCCAAATATaGGTTCCTTCAAATGGTGTC +
Preference number: 5 (lower is better)
Translates to: QHQVPVYALHSEHELVFLNKVQI*VPSNGV
Trigger: GACACCATTTGAAGGAACCAATATTTGGACCTTATT...GAGGAACACAAGCTCATGTTCTGAGTGAAGGGCGTACACTGGCACCTGGTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp CAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTTGGGGAAAATGCCAATaGAAGGAACCCTGCCTATAC +
Preference number: 5 (lower is better)
Translates to: QEGRQRSSTQITIGVSCCWGKCQ*KEPCLY
Trigger: GTATAGGCAGGGTTCCTTCAATTGGCATTTTCCCCA...ACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACACCCTCTACGGTGTCCTaGCAAAGTGTGGCAGTCACT +
Preference number: 5 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTPSTVS*QSVAVT
Trigger: AGTGACTGCCACACTTTGCAAGGACACCGTAGAGGG...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp TACTTCTGTAAGACTTCTGGCTTCAGGAAATACTTTGTGGCCCGTACAACATCAATCTTGAGTAAACTGTaGTCCAAGGGCAGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: YFCKTSGFRKYFVARTTSILSKL*SKGSSQ
Trigger: CTGGCTGCTGCCCTTGGACAACAGTTTACTCAAGAT...TGATGTTGTACGGGCCACAAAGTATTTCCTGAAGCCAGAAGTCTTACAGAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421723.2
CDS-3UTR CAA 90 bp GGCTTTTATGAATATTCTAGCCAGTCCAAAGGAGGGCAACACATACTGTATCCAGTTAAGCTTGGGCTGTaGAAACTTCCAGACCTGGCT +
Preference number: 5 (lower is better)
Translates to: GFYEYSSQSKGGQHILYPVKLGL*KLPDLA
Trigger: AGCCAGGTCTGGAAGTTTCAACAGCCCAAGCTTAAC...TGGATACAGTATGTGTTGCCCTCCTTTGGACTGGCTAGAATATTCATAAAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475381.7
CDS-3UTR CAA 90 bp GGACGGCAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTGCATTGACTTCTGTTTaGTACATAAAATGCTACTGG +
Preference number: 5 (lower is better)
Translates to: GRQEGRQRSSTQITIGVSALTSV*YIKCYW
Trigger: CCAGTAGCATTTTATGTACAAAACAGAAGTCAATGC...AGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTGCCGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp CCAGTTCCTAGTCCTGCTTTCTGTAGCTGTAGGTATCAGTATAGTTGGCTAAGATCAATTCCTCAGCCATaGCTGTACACAGCTCATCAT +
Preference number: 5 (lower is better)
Translates to: PVPSPAFCSCRYQYSWLRSIPQP*LYTAHH
Trigger: ATGATGAGCTGTGTACAGCAATGGCTGAGGAATTGA...TCTTAGCCAACTATACTGATACCTACAGCTACAGAAAGCAGGACTAGGAACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp CCAGTTCCTAGTCCTGCTTTCTGTAGCTGTAGGTATCAGTATAGTTGGCTAAGAGCTTCAGGAAATACTTaGTGGCCCGTACAACATCAT +
Preference number: 5 (lower is better)
Translates to: PVPSPAFCSCRYQYSWLRASGNT*WPVQHH
Trigger: ATGATGTTGTACGGGCCACAAAGTATTTCCTGAAGC...TCTTAGCCAACTATACTGATACCTACAGCTACAGAAAGCAGGACTAGGAACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGGCTTCAGGAAATACTTaGTGGCCCGTACAACATCAT +
Preference number: 5 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKASGNT*WPVQHH
Trigger: ATGATGTTGTACGGGCCACAAAGTATTTCCTGAAGC...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp CCAGTTCCTAGTCCTGCTTTCTGTAGCTGTAGGTATCAGTATAGTTGGCTAAGATGGGGTGTTCACATTTaGCTGATAAGATGGTGTGTT +
Preference number: 5 (lower is better)
Translates to: PVPSPAFCSCRYQYSWLRWGVHI*LIRWCV
Trigger: AACACACCATCTTATCAGCAAAATGTGAACACCCCA...TCTTAGCCAACTATACTGATACCTACAGCTACAGAAAGCAGGACTAGGAACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp CAGGAAGGCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTCAACTCAAATCACAATaGGAGTGTCTTGTTGTGTCA +
Preference number: 5 (lower is better)
Translates to: QEGRQRSSTQITIGVSCCQLKSQ*ECLVVS
Trigger: TGACACAACAAGACACTCCAATTGTGATTTGAGTTG...ACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGCCTTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp CAAATTCTGCCTGGATCAACCATATACTTCTGTAAGACTTCTGGCTTCAGGAAATCAATTCCTCAGCCATaGCTGTACACAGCTCATCAT +
Preference number: 5 (lower is better)
Translates to: QILPGSTIYFCKTSGFRKSIPQP*LYTAHH
Trigger: ATGATGAGCTGTGTACAGCAATGGCTGAGGAATTGA...TTTCCTGAAGCCAGAAGTCTTACAGAAGTATATGGTTGATCCAGGCAGAATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421723.2
CDS-3UTR CAA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACATCAATTCCTCAGCCATaGCTGTACACAGCTCATCAT +
Preference number: 5 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTSIPQP*LYTAHH
Trigger: ATGATGAGCTGTGTACAGCAATGGCTGAGGAATTGA...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACAGCTTCAGGAAATACTTaGTGGCCCGTACAACATCAT +
Preference number: 5 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTASGNT*WPVQHH
Trigger: ATGATGTTGTACGGGCCACAAAGTATTTCCTGAAGC...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp AACAATTCAGCTCAAACTCTTGGCATTATGATCATCCTTTTCCTAACATGTGTAGCACTCTCCAAACGCTaGGCATACATGATGCCATCG +
Preference number: 5 (lower is better)
Translates to: NNSAQTLGIMIILFLTCVALSKR*AYMMPS
Trigger: CGATGGCATCATGTATGCCAAGCGTTTGGAGAGTGC...TACACATGTTAGGAAAAGGATGATCATAATGCCAAGAGTTTGAGCTGAATTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475381.7
CDS-3UTR CAA 90 bp GCAGGCAGAGATCCTCAACTCAAATCACAATTGGAGTGTCTTGTTGTGTCAAAGGAGATCCGGAATCATTaGCTGTCTGCAATTACTATA +
Preference number: 5 (lower is better)
Translates to: AGRDPQLKSQLECLVVSKEIRNH*LSAITI
Trigger: TATAGTAATTGCAGACAGCAAATGATTCCGGATCTC...CTTTGACACAACAAGACACTCCAATTGTGATTTGAGTTGAGGATCTCTGCCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp CCAGTTCCTAGTCCTGCTTTCTGTAGCTGTAGGTATCAGTATAGTTGGCTAAGAGAGATCCGGAATCATTaGCTGTCTGCAATTACTATA +
Preference number: 5 (lower is better)
Translates to: PVPSPAFCSCRYQYSWLREIRNH*LSAITI
Trigger: TATAGTAATTGCAGACAGCAAATGATTCCGGATCTC...TCTTAGCCAACTATACTGATACCTACAGCTACAGAAAGCAGGACTAGGAACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp AACAATTCAGCTCAAACTCTTGGCATTATGATCATCCTTTTCCTAACATGTGTACCACTGGGCAGAAGATaGGGAAAGAATTGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: NNSAQTLGIMIILFLTCVPLGRR*GKNCGW
Trigger: CCAGCCACAATTCTTTCCCAATCTTCTGCCCAGTGG...TACACATGTTAGGAAAAGGATGATCATAATGCCAAGAGTTTGAGCTGAATTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475381.7
CDS-3UTR CAA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACATGGGGTGTTCACATTTaGCTGATAAGATGGTGTGTT +
Preference number: 5 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTWGVHI*LIRWCV
Trigger: AACACACCATCTTATCAGCAAAATGTGAACACCCCA...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp AACAATTCAGCTCAAACTCTTGGCATTATGATCATCCTTTTCCTAACATGTGTATGGGGAAAATGCCAATaGAAGGAACCCTGCCTATAC +
Preference number: 5 (lower is better)
Translates to: NNSAQTLGIMIILFLTCVWGKCQ*KEPCLY
Trigger: GTATAGGCAGGGTTCCTTCAATTGGCATTTTCCCCA...TACACATGTTAGGAAAAGGATGATCATAATGCCAAGAGTTTGAGCTGAATTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475381.7
CDS-3UTR CAA 90 bp AACAATTCAGCTCAAACTCTTGGCATTATGATCATCCTTTTCCTAACATGTGTATCAATTCCTCAGCCATaGCTGTACACAGCTCATCAT +
Preference number: 5 (lower is better)
Translates to: NNSAQTLGIMIILFLTCVSIPQP*LYTAHH
Trigger: ATGATGAGCTGTGTACAGCAATGGCTGAGGAATTGA...TACACATGTTAGGAAAAGGATGATCATAATGCCAAGAGTTTGAGCTGAATTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475381.7
CDS-3UTR CAA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACAAGTCCTTTGAGAAACTaGTTCTTTCCAGAAAACCTT +
Preference number: 5 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTSPLRN*FFPENL
Trigger: AAGGTTTTCTGGAAAGAACAAGTTTCTCAAAGGACT...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS-3UTR CAA 90 bp TTTAGAGATCCGGAATCATTTGCTGTCTGCAATTACTATAGGCTTTGGCTCACAAATAAGGTCCAAATATaGGTTCCTTCAAATGGTGTC +
Preference number: 5 (lower is better)
Translates to: FRDPESFAVCNYYRLWLTNKVQI*VPSNGV
Trigger: GACACCATTTGAAGGAACCAATATTTGGACCTTATT...TGTGAGCCAAAGCCTATAGTAATTGCAGACAGCAAATGATTCCGGATCTCTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS CAA 90 bp GCCAGCGCCACCAGGGCGGTGAGCAGGACACAGGACGACCTCATCTaGCCCTGGCTCGGCTCGCCAGCGGGCTGGCAAAGAGGAAAGGGC +
Preference number: 6 (lower is better)
Translates to: ASATRAVSRTQDDLI*PWLGSPAGWQRGKG
Trigger: GCCCTTTCCTCTTTGCCAGCCCGCTGGCGAGCCGAGCCAGGGCAAGATGAGGTCGTCCTGTGTCCTGCTCACCGCCCTGGTGGCGCTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421723.2
ENST00000424772.2
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS CAA 72 bp ACCAGGGCGGTGAGCAGGACACAGGACGACCTCATCTaGCCCTGGCTCGGCTCGCCAGCGGGCTGGCAAAGA +
Preference number: 6 (lower is better)
Translates to: TRAVSRTQDDLI*PWLGSPAGWQR
Trigger: TCTTTGCCAGCCCGCTGGCGAGCCGAGCCAGGGCAAGATGAGGTCGTCCTGTGTCCTGCTCACCGCCCTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421723.2
ENST00000424772.2
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS CCA 72 bp GACCTCATCTTGCCCTGGCTCGGCTCGCCAGCGGGCTaGCAAAGAGGAAAGGGCGATACCACCCGGAGACCT +
Preference number: 6 (lower is better)
Translates to: DLILPWLGSPAG*QRGKGDTTRRP
Trigger: AGGTCTCCGGGTGGTATCGCCCTTTCCTCTTTGCCAGCCCGCTGGCGAGCCGAGCCAGGGCAAGATGAGGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421723.2
ENST00000424772.2
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS CCA 72 bp GCGGTGAGCAGGACACAGGACGACCTCATCTTGCCCTaGCTCGGCTCGCCAGCGGGCTGGCAAAGAGGAAAG +
Preference number: 6 (lower is better)
Translates to: AVSRTQDDLILP*LGSPAGWQRGK
Trigger: CTTTCCTCTTTGCCAGCCCGCTGGCGAGCCGAGCCAGGGCAAGATGAGGTCGTCCTGTGTCCTGCTCACCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421723.2
ENST00000424772.2
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS TCA 72 bp TGTAGACGTAATAGGCGGCCAGCGCCACCAGGGCGGTaGGCAGGACACAGGACGACCTCATCTTGCCCTGGC +
Preference number: 6 (lower is better)
Translates to: CRRNRRPAPPGR*AGHRTTSSCPG
Trigger: GCCAGGGCAAGATGAGGTCGTCCTGTGTCCTGCTCACCGCCCTGGTGGCGCTGGCCGCCTATTACGTCTACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421723.2
ENST00000424772.2
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS GCA 72 bp CAGAGGCTGCGTCGGGAGGAAGTTGGAGCGCGGACATaGCCCCTCTACGGTGTCCTTGCAAAGTGTGGCAGT +
Preference number: 6 (lower is better)
Translates to: QRLRREEVGART*PLYGVLAKCGS
Trigger: ACTGCCACACTTTGCAAGGACACCGTAGAGGGGGCATGTCCGCGCTCCAACTTCCTCCCGACGCAGCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538775.5
ENST00000543711.5
CDS GCA 72 bp CCAAGGCCCAGCCTCCTCCGTGGATATAAACGACGCTaGGTTTCAGTGGCTCTTCGGGCTTCGGAGGGCCTT +
Preference number: 6 (lower is better)
Translates to: PRPSLLRGYKRR*VSVALRASEGL
Trigger: AAGGCCCTCCGAAGCCCGAAGAGCCACTGAAACGCAGCGTCGTTTATATCCACGGAGGAGGCTGGGCCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424772.2
ENST00000475381.7
ENST00000538775.5
CDS GCA 72 bp CGTCAGAATGTAGGTCTTTGGGAGGAGCTGCAGCACTaGCTGGTCTGCAATGAGTGGGGCGGAGCGGGCATC +
Preference number: 6 (lower is better)
Translates to: RQNVGLWEELQH*LVCNEWGGAGI
Trigger: GATGCCCGCTCCGCCCCACTCATTGCAGACCAGGCAGTGCTGCAGCTCCTCCCAAAGACCTACATTCTGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS TCA 72 bp TCTGCAATGAGTGGGGCGGAGCGGGCATCCAGCAACTaGGGAAGCTCCTGGACAATCCTGGCATTGCCTGTG +
Preference number: 6 (lower is better)
Translates to: SAMSGAERASSN*GSSWTILALPV
Trigger: CACAGGCAATGCCAGGATTGTCCAGGAGCTTCCTCAGTTGCTGGATGCCCGCTCCGCCCCACTCATTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS CCA 72 bp GGATCAGGTTACTCACTTGCTGTGCACCCCGGAAAGTaGCGTCCAGCAGCATCAGCTTCCAGGGGTCGGACA +
Preference number: 6 (lower is better)
Translates to: GSGYSLAVHPGK*RPAASASRGRT
Trigger: TGTCCGACCCCTGGAAGCTGATGCTGCTGGACGCCACTTTCCGGGGTGCACAGCAAGTGAGTAACCTGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424772.2
ENST00000475381.7
ENST00000538775.5
CDS CAA 90 bp GTCGGGAGGAAGTTGGAGCGCGGACATGCCCCCTCTACGGTGTCCTaGCAAAGTGTGGCAGTCACTACAGGTTTGAGGAAGGCTCTGTCG +
Preference number: 6 (lower is better)
Translates to: VGRKLERGHAPSTVS*QSVAVTTGLRKALS
Trigger: CGACAGAGCCTTCCTCAAACCTGTAGTGACTGCCACACTTTGCAAGGACACCGTAGAGGGGGCATGTCCGCGCTCCAACTTCCTCCCGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538775.5
ENST00000543711.5
CDS GCA 72 bp AAGGGCGATACCACCCGGAGACCTCCGGCAACTTTCTaGCCGCGGCAGCTGCTCATTCACGCGTTTCTTATA +
Preference number: 6 (lower is better)
Translates to: KGDTTRRPPATF*PRQLLIHAFLI
Trigger: TATAAGAAACGCGTGAATGAGCAGCTGCCGCGGGCAGAAAGTTGCCGGAGGTCTCCGGGTGGTATCGCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421723.2
ENST00000538775.5
ENST00000543711.5
CDS CCA 72 bp GCCTCCTCCGTGGATATAAACGACGCTGCGTTTCAGTaGCTCTTCGGGCTTCGGAGGGCCTTCAAACACTCT +
Preference number: 6 (lower is better)
Translates to: ASSVDINDAAFQ*LFGLRRAFKHS
Trigger: AGAGTGTTTGAAGGCCCTCCGAAGCCCGAAGAGCCACTGAAACGCAGCGTCGTTTATATCCACGGAGGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424772.2
ENST00000475381.7
ENST00000538775.5
CDS CAA 72 bp AAGTTGGAGCGCGGACATGCCCCCTCTACGGTGTCCTaGCAAAGTGTGGCAGTCACTACAGGTTTGAGGAAG +
Preference number: 6 (lower is better)
Translates to: KLERGHAPSTVS*QSVAVTTGLRK
Trigger: CTTCCTCAAACCTGTAGTGACTGCCACACTTTGCAAGGACACCGTAGAGGGGGCATGTCCGCGCTCCAACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538775.5
ENST00000543711.5
CDS CCA 72 bp GGGCATCCAGCAACTGAGGAAGCTCCTGGACAATCCTaGCATTGCCTGTGGTCTGTACAACAGGCTTGTAGT +
Preference number: 6 (lower is better)
Translates to: GHPATEEAPGQS*HCLWSVQQACS
Trigger: ACTACAAGCCTGTTGTACAGACCACAGGCAATGCCAGGATTGTCCAGGAGCTTCCTCAGTTGCTGGATGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5
CDS GCA 72 bp CCAGCAACTGAGGAAGCTCCTGGACAATCCTGGCATTaGCTGTGGTCTGTACAACAGGCTTGTAGTTCTTTG +
Preference number: 6 (lower is better)
Translates to: PATEEAPGQSWH*LWSVQQACSSL
Trigger: CAAAGAACTACAAGCCTGTTGTACAGACCACAGGCAATGCCAGGATTGTCCAGGAGCTTCCTCAGTTGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475381.7
ENST00000538775.5
ENST00000543711.5