RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NCDN (Homo sapiens)

Ensembl gene IDs: ENSG00000020129

Ensembl transcript IDs: ENST00000356090.8, ENST00000373243.7, ENST00000373253.7, ENST00000423723.1, ENST00000437806.1, ENST00000459931.1

Found 663 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGAGCCCACGCCCTGGCCGGCAGGGCACATGGGCTGAGGCAGTCTaGTCCTGCCAGCCCTGTCTTACCCTGGAGCCTCCCTCCTGCAGG +
Preference number: 1 (lower is better)
Translates to: GSPRPGRQGTWAEAV*SCQPCLTLEPPSCR
Trigger: CCTGCAGGAGGGAGGCTCCAGGGTAAGACAGGGCTGGCAGGAGCAGACTGCCTCAGCCCATGTGCCCTGCCGGCCAGGGCGTGGGCTCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR GCA 90 bp AGCCAGGCACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATaGGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGCCAG +
Preference number: 1 (lower is better)
Translates to: SQAPRWQWSVITGET*GFWGSVPPVPGSSQ
Trigger: CTGGCTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGTGCCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR CCA 90 bp TGGGAGTTAAAGCCAGGCACCACGGTGGCAGTGGAGTGTAATCACTaGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGG +
Preference number: 1 (lower is better)
Translates to: WELKPGTTVAVECNH*GNMRILGKCPSCSW
Trigger: CCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGTGCCTGGCTTTAACTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR CCA 90 bp AAATGGGAGGATATGGCAGGGCCACTTGGCAGCAACCCAGTGACATaGGGGCGGGGGTGCAGTGTTTCATCTGTACTTGAGAGCACCAGA +
Preference number: 1 (lower is better)
Translates to: KWEDMAGPLGSNPVT*GRGCSVSSVLESTR
Trigger: TCTGGTGCTCTCAAGTACAGATGAAACACTGCACCCCCGCCCCCATGTCACTGGGTTGCTGCCAAGTGGCCCTGCCATATCCTCCCATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423723.1
3UTR GCA 90 bp AGAGCCCCCACAAGGCCTGGCCACATCAACATGAGTTTGGCAATCTaGTGTACAAGTGAAAGATGTGGGCTGGGGAGTCGGATGGCCTGT +
Preference number: 1 (lower is better)
Translates to: RAPTRPGHINMSLAI*CTSERCGLGSRMAC
Trigger: ACAGGCCATCCGACTCCCCAGCCCACATCTTTCACTTGTACAGCAGATTGCCAAACTCATGTTGATGTGGCCAGGCCTTGTGGGGGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423723.1
3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTCCCCCTaGGTTTATAAGAAAGGTAGTCCCTGCTGGAGCCGCCAGTCGCGT +
Preference number: 1 (lower is better)
Translates to: CVCVCVCVCVCVWSP*VYKKGSPCWSRQSR
Trigger: ACGCGACTGGCGGCTCCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACACACACACACACACACACACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR GCA 90 bp TGGAGGCAGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTaGGATATCAATGGCCTAAGCCTGCTGTCTGCCCAAGGGAGCCAA +
Preference number: 1 (lower is better)
Translates to: WRQFRPWVTEADRKN*DINGLSLLSAQGSQ
Trigger: TTGGCTCCCTTGGGCAGACAGCAGGCTTAGGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACTGCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR GCA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATaGTCAGGTGTCCAAGCAGGGATAAGGACAGGCAAAATAAATAAC +
Preference number: 1 (lower is better)
Translates to: LAPARPDGTRGTGIR*SGVQAGIRTGKINN
Trigger: GTTATTTATTTTGCCTGTCCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR CCA 90 bp GCTGCAACACGACACAAAGGTTTAAAGATCTGGGCCCAAAGACTCTaGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACCC +
Preference number: 1 (lower is better)
Translates to: AATRHKGLKIWAQRL*VPSSKLRWKEVSPP
Trigger: GGGTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGGCCCAGATCTTTAAACCTTTGTGTCGTGTTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR CCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTGGAGCCGC +
Preference number: 1 (lower is better)
Translates to: VCVCVCVCVCVCVCV*SPWVYKKGSPCWSR
Trigger: GCGGCTCCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACACACACACACACACACACACACACACACACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR TCA 90 bp TACTTGAGAGCACCAGAGCCCCCACAAGGCCTGGCCACATCAACATaGGTTTGGCAATCTGCTGTACAAGTGAAAGATGTGGGCTGGGGA +
Preference number: 1 (lower is better)
Translates to: YLRAPEPPQGLATST*VWQSAVQVKDVGWG
Trigger: TCCCCAGCCCACATCTTTCACTTGTACAGCAGATTGCCAAACTCATGTTGATGTGGCCAGGCCTTGTGGGGGCTCTGGTGCTCTCAAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423723.1
3UTR CCA 90 bp CCCCATCGTCACTCTGCTGCAACACGACACAAAGGTTTAAAGATCTaGGCCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAG +
Preference number: 1 (lower is better)
Translates to: PHRHSAATRHKGLKI*AQRLWVPSSKLRWK
Trigger: CTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGGCCCAGATCTTTAAACCTTTGTGTCGTGTTGCAGCAGAGTGACGATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR CCA 90 bp TGTCCACATGTGCACAGCTTTGAACTTGGCGATCACAGAACGCACTaGGGGAGGGAAGCAAGGGATCAAGAGTGTGTGTGTGTGTGTGTG +
Preference number: 1 (lower is better)
Translates to: CPHVHSFELGDHRTH*GREARDQECVCVCV
Trigger: CACACACACACACACACACTCTTGATCCCTTGCTTCCCTCCCCCAGTGCGTTCTGTGATCGCCAAGTTCAAAGCTGTGCACATGTGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR GCA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCCCTCCTTCCCTCTCTaGCCGCCCCTGGGTCTGTCC +
Preference number: 2 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCPSFPL*PPLGLS
Trigger: GGACAGACCCAGGGGCGGGCAGAGAGGGAAGGAGGG...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR TCA 90 bp TTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCCCCGCAGTTCCTTACACTTaGGGGGTGGGCACCATGCCC +
Preference number: 2 (lower is better)
Translates to: FPGLAGTTTLISKPIPAPAVPYT*GVGTMP
Trigger: GGGCATGGTGCCCACCCCTCAAGTGTAAGGAACTGC...GGGGGCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR GCA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGCCCTCCTTCCCTCTCTaGCCGCCCCTGGGTCTGTCC +
Preference number: 2 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQPSFPL*PPLGLS
Trigger: GGACAGACCCAGGGGCGGGCAGAGAGGGAAGGAGGG...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR CCA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGCTCTCTGCCCGCCCCTaGGTCTGTCCCCGGTGGACA +
Preference number: 2 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQLSARP*VCPRWT
Trigger: TGTCCACCGGGGACAGACCCAGGGGCGGGCAGAGAG...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR GCA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTTGGGCTGAGGCAGTCTaGTCCTGCCAGCCCTGTCTT +
Preference number: 2 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGWAEAV*SCQPCL
Trigger: AAGACAGGGCTGGCAGGAGCAGACTGCCTCAGCCCA...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR CCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACCTCTCTGCCCGCCCCTaGGTCTGTCCCCGGTGGACA +
Preference number: 2 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHLSARP*VCPRWT
Trigger: TGTCCACCGGGGACAGACCCAGGGGCGGGCAGAGAG...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR TCA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTCGGGGACAACCACGTTaGTTTCCAAGCCGATCCCTG +
Preference number: 2 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGRGQPR*FPSRSL
Trigger: CAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCG...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR GCA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGCCCTCCTTCCCTCTCTaGCCGCCCCTGGGTCTGTCC +
Preference number: 2 (lower is better)
Translates to: TTVAVECNHWGNMRILGKPSFPL*PPLGLS
Trigger: GGACAGACCCAGGGGCGGGCAGAGAGGGAAGGAGGG...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR GCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACCTGGAGCCTCCCTCCTaGAGGGGAGCCAGACATCGG +
Preference number: 2 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHLEPPS*RGARHR
Trigger: CCGATGTCTGGCTCCCCTGCAGGAGGGAGGCTCCAG...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR CCA 90 bp TATCAATGGCCTAAGCCTGCTGTCTGCCCAAGGGAGCCAAGGGCAAGAGCCAAACTCTCTGCCCGCCCCTaGGTCTGTCCCCGGTGGACA +
Preference number: 2 (lower is better)
Translates to: YQWPKPAVCPREPRARAKLSARP*VCPRWT
Trigger: TGTCCACCGGGGACAGACCCAGGGGCGGGCAGAGAG...TTTGGCTCTTGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGGCCATTGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR CCA 90 bp TATCAATGGCCTAAGCCTGCTGTCTGCCCAAGGGAGCCAAGGGCAAGAGCCAAAGGCCGGCAGGGCACATaGGCTGAGGCAGTCTGCTCC +
Preference number: 2 (lower is better)
Translates to: YQWPKPAVCPREPRARAKGRQGT*AEAVCS
Trigger: GGAGCAGACTGCCTCAGCCCATGTGCCCTGCCGGCC...TTTGGCTCTTGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGGCCATTGATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR GCA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTCCCCCATCGTCACTCTaGTGCAACACGACACAAAGG +
Preference number: 2 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGPPSSL*CNTTQR
Trigger: CCTTTGTGTCGTGTTGCAGCAGAGTGACGATGGGGG...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR TCA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGGCAGTTCCTTACACTTaGGGGGTGGGCACCATGCCC +
Preference number: 2 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRAVPYT*GVGTMP
Trigger: GGGCATGGTGCCCACCCCTCAAGTGTAAGGAACTGC...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR GCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACGAGGGGTGGGCACCATaGCCTTGCCCTCAGAAAAGC +
Preference number: 2 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHEGWAP*PCPQKS
Trigger: GCTTTTCTGAGGGCAAGGGCATGGTGCCCACCCCTC...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR GCA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTCTGGAGCCTCCCTCCTaGAGGGGAGCCAGACATCGG +
Preference number: 2 (lower is better)
Translates to: QWSVITGETCGFWGSVPPLEPPS*RGARHR
Trigger: CCGATGTCTGGCTCCCCTGCAGGAGGGAGGCTCCAG...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR GCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACTGGGCTGAGGCAGTCTaGTCCTGCCAGCCCTGTCTT +
Preference number: 2 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHWAEAV*SCQPCL
Trigger: AAGACAGGGCTGGCAGGAGCAGACTGCCTCAGCCCA...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR CCA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGCAGGTTGCCCTAGGATaGAGGCAGTTCAGACCCTGG +
Preference number: 2 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQQVALG*RQFRPW
Trigger: CCAGGGTCTGAACTGCCTCCATCCTAGGGCAACCTG...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR CCA 90 bp GCAGTGTTTCATCTGTACTTGAGAGCACCAGAGCCCCCACAAGGCCTGGCCACAGTCGGATGGCCTGTGTaGAGTCCTGGCTCTGGCACT +
Preference number: 2 (lower is better)
Translates to: AVFHLYLRAPEPPQGLATVGWPV*SPGSGT
Trigger: AGTGCCAGAGCCAGGACTCCACACAGGCCATCCGAC...TGTGGCCAGGCCTTGTGGGGGCTCTGGTGCTCTCAAGTACAGATGAAACACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423723.1
3UTR-3UTR TCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACCGGGGACAACCACGTTaGTTTCCAAGCCGATCCCTG +
Preference number: 2 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHRGQPR*FPSRSL
Trigger: CAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCG...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR GCA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGGGGCTTCAGGGAAGATaGCTCCTCCCTCCTTCCCTC +
Preference number: 2 (lower is better)
Translates to: TTVAVECNHWGNMRILGKGLQGR*LLPPSL
Trigger: GAGGGAAGGAGGGAGGAGGCATCTTCCCTGAAGCCC...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR GCA 90 bp TATCAATGGCCTAAGCCTGCTGTCTGCCCAAGGGAGCCAAGGGCAAGAGCCAAATGGGCTGAGGCAGTCTaGTCCTGCCAGCCCTGTCTT +
Preference number: 2 (lower is better)
Translates to: YQWPKPAVCPREPRARAKWAEAV*SCQPCL
Trigger: AAGACAGGGCTGGCAGGAGCAGACTGCCTCAGCCCA...TTTGGCTCTTGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGGCCATTGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR GCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACCTGTCTGCCCCAGGTTaGCCTAGGATGGAGGCAGTT +
Preference number: 2 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHLSAPG*PRMEAV
Trigger: AACTGCCTCCATCCTAGGGCAACCTGGGGCAGACAG...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR CCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCGGCCGGCAGGGCACATaGGCTGAGGCAGTCTGCTCC +
Preference number: 2 (lower is better)
Translates to: SSDPGSLKLIGRTAISMAGRQGT*AEAVCS
Trigger: GGAGCAGACTGCCTCAGCCCATGTGCCCTGCCGGCC...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR CAA 90 bp GAGAGCACCAGAGCCCCCACAAGGCCTGGCCACATCAACATGAGTTaGGCAATCTGCTGTACAAGTGAAAGATGTGGGCTGGGGAGTCGG +
Preference number: 2 (lower is better)
Translates to: ESTRAPTRPGHINMS*AICCTSERCGLGSR
Trigger: CCGACTCCCCAGCCCACATCTTTCACTTGTACAGCAGATTGCCAAACTCATGTTGATGTGGCCAGGCCTTGTGGGGGCTCTGGTGCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423723.1
3UTR-3UTR TCA 90 bp GTGTGTGTGTGTGTGTGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTGGGCAGTTCCTTACACTTaGGGGGTGGGCACCATGCCC +
Preference number: 2 (lower is better)
Translates to: VCVCVWSPWVYKKGSPCWAVPYT*GVGTMP
Trigger: GGGCATGGTGCCCACCCCTCAAGTGTAAGGAACTGC...CCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR GCA 90 bp GTGTGTGTGTGTGTGTGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTGGGAGGGGTGGGCACCATaGCCTTGCCCTCAGAAAAGC +
Preference number: 2 (lower is better)
Translates to: VCVCVWSPWVYKKGSPCWEGWAP*PCPQKS
Trigger: GCTTTTCTGAGGGCAAGGGCATGGTGCCCACCCCTC...CCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR GCA 90 bp GTGTGTGTGTGTGTGTGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTGGCCTAAGCCTGCTGTCTaGCCAAGGGAGCCAAGGGCA +
Preference number: 2 (lower is better)
Translates to: VCVCVWSPWVYKKGSPCWPKPAV*PREPRA
Trigger: TGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGG...CCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR CCA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTTCCAGCCAGGCCAGATaGCACCAGGGGGACAGGAAT +
Preference number: 2 (lower is better)
Translates to: QWSVITGETCGFWGSVPPSSQAR*HQGDRN
Trigger: ATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGA...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR GCA 90 bp GGAGGCAGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCACCTAAGCCTGCTGTCTaGCCAAGGGAGCCAAGGGCA +
Preference number: 2 (lower is better)
Translates to: GGSSDPGSLKLIGRTAISPKPAV*PREPRA
Trigger: TGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGG...TGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACTGCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR CCA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGGAACTGCGATATCAATaGCCTAAGCCTGCTGTCTGC +
Preference number: 2 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQELRYQ*PKPAVC
Trigger: GCAGACAGCAGGCTTAGGCCATTGATATCGCAGTTC...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR CCA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTCAAGCAAGCTCAGGTaGAAGGAGGTTTCCCCACCC +
Preference number: 2 (lower is better)
Translates to: TTVAVECNHWGNMRILGKSSKLR*KEVSPP
Trigger: GGGTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGA...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR CCA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTAAAGGTTTAAAGATCTaGGCCCAAAGACTCTGGGTC +
Preference number: 2 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGKGLKI*AQRLWV
Trigger: GACCCAGAGTCTTTGGGCCCAGATCTTTAAACCTTT...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR TCA 90 bp GCAGTGTTTCATCTGTACTTGAGAGCACCAGAGCCCCCACAAGGCCTGGCCACAAATCTGCTGTACAAGTaGAAGATGTGGGCTGGGGAG +
Preference number: 2 (lower is better)
Translates to: AVFHLYLRAPEPPQGLATNLLYK*KMWAGE
Trigger: CTCCCCAGCCCACATCTTTCACTTGTACAGCAGATT...TGTGGCCAGGCCTTGTGGGGGCTCTGGTGCTCTCAAGTACAGATGAAACACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423723.1
3UTR-3UTR GCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCGGGCTTCAGGGAAGATaGCTCCTCCCTCCTTCCCTC +
Preference number: 2 (lower is better)
Translates to: SSDPGSLKLIGRTAISMAGLQGR*LLPPSL
Trigger: GAGGGAAGGAGGGAGGAGGCATCTTCCCTGAAGCCC...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR GCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCGAGGGGTGGGCACCATaGCCTTGCCCTCAGAAAAGC +
Preference number: 2 (lower is better)
Translates to: SSDPGSLKLIGRTAISMAEGWAP*PCPQKS
Trigger: GCTTTTCTGAGGGCAAGGGCATGGTGCCCACCCCTC...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR GCA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGCCATCGTCACTCTGCTaGAACACGACACAAAGGTTT +
Preference number: 2 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQPSSLC*NTTQRF
Trigger: AAACCTTTGTGTCGTGTTGCAGCAGAGTGACGATGG...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR GCA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGGGACAGGAATCAGATaGTCAGGTGTCCAAGCAGGG +
Preference number: 2 (lower is better)
Translates to: QWSVITGETCGFWGSVPPGTGIR*SGVQAG
Trigger: CCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCC...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR CCA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGAAAGGTTTAAAGATCTaGGCCCAAAGACTCTGGGTC +
Preference number: 2 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQKGLKI*AQRLWV
Trigger: GACCCAGAGTCTTTGGGCCCAGATCTTTAAACCTTT...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR CCA 90 bp TTAAAAATGGGAGGATATGGCAGGGCCACTTGGCAGCAACCCAGTGACATGGGGAGCCCCCACAAGGCCTaGCCACATCAACATGAGTTT +
Preference number: 2 (lower is better)
Translates to: LKMGGYGRATWQQPSDMGSPHKA*PHQHEF
Trigger: AAACTCATGTTGATGTGGCCAGGCCTTGTGGGGGCT...CCCCATGTCACTGGGTTGCTGCCAAGTGGCCCTGCCATATCCTCCCATTTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000423723.1
3UTR-3UTR GCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACGCTGATAGGAAGAACTaGGATATCAATGGCCTAAGC +
Preference number: 2 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHADRKN*DINGLS
Trigger: GCTTAGGCCATTGATATCGCAGTTCTTCCTATCAGC...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR GCA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGCCATCGTCACTCTGCTaGAACACGACACAAAGGTTT +
Preference number: 2 (lower is better)
Translates to: TTVAVECNHWGNMRILGKPSSLC*NTTQRF
Trigger: AAACCTTTGTGTCGTGTTGCAGCAGAGTGACGATGG...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR CCA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGAACTGCGATATCAATaGCCTAAGCCTGCTGTCTGC +
Preference number: 2 (lower is better)
Translates to: QWSVITGETCGFWGSVPPELRYQ*PKPAVC
Trigger: GCAGACAGCAGGCTTAGGCCATTGATATCGCAGTTC...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR CAA 90 bp GGCCTGTGTGGAGTCCTGGCTCTGGCACTGACTAGCGGCAACACCTaGAGCCAATCACTTATCCATGCCAAAGTTGCTTTGTCTGTAAAA +
Preference number: 2 (lower is better)
Translates to: GLCGVLALALTSGNT*SQSLIHAKVALSVK
Trigger: TTTTACAGACAAAGCAACTTTGGCATGGATAAGTGATTGGCTCAAGGTGTTGCCGCTAGTCAGTGCCAGAGCCAGGACTCCACACAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423723.1
3UTR-3UTR CCA 90 bp GTGTGTGTGTGTGTGTGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTGGGTGGAGTGTAATCACTaGGGAAACATGCGGATTCTG +
Preference number: 2 (lower is better)
Translates to: VCVCVWSPWVYKKGSPCWVECNH*GNMRIL
Trigger: CAGAATCCGCATGTTTCCCCAGTGATTACACTCCAC...CCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR GCA 90 bp GGGGGTGCAGTGTTTCATCTGTACTTGAGAGCACCAGAGCCCCCACAAGGCCTGATGAGTTTGGCAATCTaGTGTACAAGTGAAAGATGT +
Preference number: 2 (lower is better)
Translates to: GGAVFHLYLRAPEPPQGLMSLAI*CTSERC
Trigger: ACATCTTTCACTTGTACAGCAGATTGCCAAACTCAT...CAGGCCTTGTGGGGGCTCTGGTGCTCTCAAGTACAGATGAAACACTGCACCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423723.1
3UTR CAA 90 bp ACCAATGAACATTTATTGAGTGTCCACATGTGCACAGCTTTGAACTaGGCGATCACAGAACGCACTGGGGGAGGGAAGCAAGGGATCAAG +
Preference number: 2 (lower is better)
Translates to: TNEHLLSVHMCTALN*AITERTGGGKQGIK
Trigger: CTTGATCCCTTGCTTCCCTCCCCCAGTGCGTTCTGTGATCGCCAAGTTCAAAGCTGTGCACATGTGGACACTCAATAAATGTTCATTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR CCA 90 bp AAAGTTGGGTTTCACATACAAATTAGGATTCCTGACTTCTTTAAAAATGGGAGGGGCTGGGGAGTCGGATaGCCTGTGTGGAGTCCTGGC +
Preference number: 2 (lower is better)
Translates to: KVGFHIQIRIPDFFKNGRGWGVG*PVWSPG
Trigger: GCCAGGACTCCACACAGGCCATCCGACTCCCCAGCC...CCTCCCATTTTTAAAGAAGTCAGGAATCCTAATTTGTATGTGAAACCCAACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423723.1
3UTR CAA 90 bp AGCGGCAACACCTTGAGCCAATCACTTATCCATGCCAAAGTTGCTTaGTCTGTAAAATCAGAACCCTTCAGAGGATTCTTGGAAGGGCTG +
Preference number: 2 (lower is better)
Translates to: SGNTLSQSLIHAKVA*SVKSEPFRGFLEGL
Trigger: CAGCCCTTCCAAGAATCCTCTGAAGGGTTCTGATTTTACAGACAAAGCAACTTTGGCATGGATAAGTGATTGGCTCAAGGTGTTGCCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423723.1
3UTR-3UTR GCA 90 bp AAAGTTGGGTTTCACATACAAATTAGGATTCCTGACTTCTTTAAAAATGGGAGGCCAATCACTTATCCATaGCAAAGTTGCTTTGTCTGT +
Preference number: 2 (lower is better)
Translates to: KVGFHIQIRIPDFFKNGRPITYP*QSCFVC
Trigger: ACAGACAAAGCAACTTTGGCATGGATAAGTGATTGG...CCTCCCATTTTTAAAGAAGTCAGGAATCCTAATTTGTATGTGAAACCCAACTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423723.1
3UTR GCA 72 bp CGCCCTGGCCGGCAGGGCACATGGGCTGAGGCAGTCTaGTCCTGCCAGCCCTGTCTTACCCTGGAGCCTCCC +
Preference number: 3 (lower is better)
Translates to: RPGRQGTWAEAV*SCQPCLTLEPP
Trigger: GGGAGGCTCCAGGGTAAGACAGGGCTGGCAGGAGCAGACTGCCTCAGCCCATGTGCCCTGCCGGCCAGGGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR CAA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTCGCAGTTCCTTACACTaGAGGGGTGGGCACCATGCC +
Preference number: 3 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGRSSLH*RGGHHA
Trigger: GGCATGGTGCCCACCCCTCAAGTGTAAGGAACTGCG...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR CCA 72 bp CCCCACCAGGCCTGTCTGCCCCAGGTTGCCCTAGGATaGAGGCAGTTCAGACCCTGGGTCACTGAAGCTGAT +
Preference number: 3 (lower is better)
Translates to: PHQACLPQVALG*RQFRPWVTEAD
Trigger: ATCAGCTTCAGTGACCCAGGGTCTGAACTGCCTCCATCCTAGGGCAACCTGGGGCAGACAGGCCTGGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR GCA 72 bp GTGTGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTaGTGGAGCCGCCAGTCGCGTCTCTGCAGAGAGGAG +
Preference number: 3 (lower is better)
Translates to: VWSPWVYKKGSP*WSRQSRLCREE
Trigger: CTCCTCTCTGCAGAGACGCGACTGGCGGCTCCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR GCA 72 bp CCACTTGGCAGCAACCCAGTGACATGGGGGCGGGGGTaGAGTGTTTCATCTGTACTTGAGAGCACCAGAGCC +
Preference number: 3 (lower is better)
Translates to: PLGSNPVTWGRG*SVSSVLESTRA
Trigger: GGCTCTGGTGCTCTCAAGTACAGATGAAACACTGCACCCCCGCCCCCATGTCACTGGGTTGCTGCCAAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423723.1
3UTR-3UTR CAA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACCGCAGTTCCTTACACTaGAGGGGTGGGCACCATGCC +
Preference number: 3 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHRSSLH*RGGHHA
Trigger: GGCATGGTGCCCACCCCTCAAGTGTAAGGAACTGCG...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR CAA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGCGCAGTTCCTTACACTaGAGGGGTGGGCACCATGCC +
Preference number: 3 (lower is better)
Translates to: TTVAVECNHWGNMRILGKRSSLH*RGGHHA
Trigger: GGCATGGTGCCCACCCCTCAAGTGTAAGGAACTGCG...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR CAA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACGCGGGGACAACCACGTaGATTTCCAAGCCGATCCCT +
Preference number: 3 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHAGTTT*ISKPIP
Trigger: AGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGC...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR CAA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGGCGGGGACAACCACGTaGATTTCCAAGCCGATCCCT +
Preference number: 3 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRAGTTT*ISKPIP
Trigger: AGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGC...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR GCA 72 bp CCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATaGGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGC +
Preference number: 3 (lower is better)
Translates to: PRWQWSVITGET*GFWGSVPPVPG
Trigger: GCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR CCA 72 bp AAGCCAGGCACCACGGTGGCAGTGGAGTGTAATCACTaGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCC +
Preference number: 3 (lower is better)
Translates to: KPGTTVAVECNH*GNMRILGKCPS
Trigger: GGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGTGCCTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR CCA 72 bp TGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTaGAGCCGCCAGTCGCGTCTCTGCAGAGAGGAGTCA +
Preference number: 3 (lower is better)
Translates to: WSPWVYKKGSPC*SRQSRLCREES
Trigger: TGACTCCTCTCTGCAGAGACGCGACTGGCGGCTCCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR CCA 72 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTCCCCCTaGGTTTATAAGAAAGGTAGTCCCTGCTGGAGCCGC +
Preference number: 3 (lower is better)
Translates to: VCVCVCVCVWSP*VYKKGSPCWSR
Trigger: GCGGCTCCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACACACACACACACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR CCA 72 bp GTTTGGCAATCTGCTGTACAAGTGAAAGATGTGGGCTaGGGAGTCGGATGGCCTGTGTGGAGTCCTGGCTCT +
Preference number: 3 (lower is better)
Translates to: VWQSAVQVKDVG*GVGWPVWSPGS
Trigger: AGAGCCAGGACTCCACACAGGCCATCCGACTCCCCAGCCCACATCTTTCACTTGTACAGCAGATTGCCAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423723.1
3UTR CCA 72 bp GTGCACAGCTTTGAACTTGGCGATCACAGAACGCACTaGGGGAGGGAAGCAAGGGATCAAGAGTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: VHSFELGDHRTH*GREARDQECVC
Trigger: ACACACACACTCTTGATCCCTTGCTTCCCTCCCCCAGTGCGTTCTGTGATCGCCAAGTTCAAAGCTGTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR-3UTR CAA 90 bp CCCACAAGGCCTGGCCACATCAACATGAGTTTGGCAATCTGCTGTACAAGTGAACCCTTCAGAGGATTCTaGGAAGGGCTGAATGAGGTC +
Preference number: 3 (lower is better)
Translates to: PTRPGHINMSLAICCTSEPFRGF*EGLNEV
Trigger: GACCTCATTCAGCCCTTCCAAGAATCCTCTGAAGGG...TTCACTTGTACAGCAGATTGCCAAACTCATGTTGATGTGGCCAGGCCTTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423723.1
3UTR TCA 72 bp CCACATCAACATGAGTTTGGCAATCTGCTGTACAAGTaGAAGATGTGGGCTGGGGAGTCGGATGGCCTGTGT +
Preference number: 3 (lower is better)
Translates to: PHQHEFGNLLYK*KMWAGESDGLC
Trigger: ACACAGGCCATCCGACTCCCCAGCCCACATCTTTCACTTGTACAGCAGATTGCCAAACTCATGTTGATGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423723.1
3UTR GCA 72 bp TTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTaGGATATCAATGGCCTAAGCCTGCTGTCTGCCCAA +
Preference number: 3 (lower is better)
Translates to: FRPWVTEADRKN*DINGLSLLSAQ
Trigger: TTGGGCAGACAGCAGGCTTAGGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR CCA 72 bp CACTCTGCTGCAACACGACACAAAGGTTTAAAGATCTaGGCCCAAAGACTCTGGGTCCCTTCAAGCAAGCTC +
Preference number: 3 (lower is better)
Translates to: HSAATRHKGLKI*AQRLWVPSSKL
Trigger: GAGCTTGCTTGAAGGGACCCAGAGTCTTTGGGCCCAGATCTTTAAACCTTTGTGTCGTGTTGCAGCAGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR CCA 72 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGC +
Preference number: 3 (lower is better)
Translates to: CVCVCVCVCVCV*SPWVYKKGSPC
Trigger: GCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACACACACACACACACACACACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
3UTR GCA 72 bp CAACACCTTGAGCCAATCACTTATCCATGCCAAAGTTaGTTTGTCTGTAAAATCAGAACCCTTCAGAGGATT +
Preference number: 3 (lower is better)
Translates to: QHLEPITYPCQS*FVCKIRTLQRI
Trigger: AATCCTCTGAAGGGTTCTGATTTTACAGACAAAGCAACTTTGGCATGGATAAGTGATTGGCTCAAGGTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423723.1
3UTR-3UTR CAA 90 bp AAAGTTGGGTTTCACATACAAATTAGGATTCCTGACTTCTTTAAAAATGGGAGGCATGCCAAAGTTGCTTaGTCTGTAAAATCAGAACCC +
Preference number: 3 (lower is better)
Translates to: KVGFHIQIRIPDFFKNGRHAKVA*SVKSEP
Trigger: GGGTTCTGATTTTACAGACAAAGCAACTTTGGCATG...CCTCCCATTTTTAAAGAAGTCAGGAATCCTAATTTGTATGTGAAACCCAACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR GCA 90 bp TTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCCCCCCCTCCTTCCCTCTCTaGCCGCCCCTGGGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: FPGLAGTTTLISKPIPAPPSFPL*PPLGLS
Trigger: GGACAGACCCAGGGGCGGGCAGAGAGGGAAGGAGGG...GGGGGCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAA
68% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp TTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCCCCCCTTGCCCAACAGGCTaGGGCCCCGAGCGGCGAAGT +
Preference number: 4 (lower is better)
Translates to: FPGLAGTTTLISKPIPAPPCPTG*GPERRS
Trigger: ACTTCGCCGCTCGGGGCCGCAGCCTGTTGGGCAAGG...GGGGGCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAA
68% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS-3UTR GCA 90 bp TTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCCCCCTGAGCTCACCAGGCTaGGGCCCCGAGCGGCGAAGT +
Preference number: 4 (lower is better)
Translates to: FPGLAGTTTLISKPIPAPLSSPG*GPERRS
Trigger: ACTTCGCCGCTCGGGGCCGCAGCCTGGTGAGCTCAG...GGGGGCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAA
68% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000373243.7
CDS-3UTR CCA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCGGTCTGAGCCCGGGGTaGCCCGCGCCACGTGGGACT +
Preference number: 4 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCGLSPG*PAPRGT
Trigger: AGTCCCACGTGGCGCGGGCCACCCCGGGCTCAGACC...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCTTCTCCCAGCGCGATaGTCCGGGAGCCTCGGGCCG +
Preference number: 4 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCLLPAR*SGSLGP
Trigger: CGGCCCGAGGCTCCCGGAGCATCGCGCTGGGAGAAG...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTCTTCTCCCAGCGCGATaGTCCGGGAGCCTCGGGCCG +
Preference number: 4 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGLLPAR*SGSLGP
Trigger: CGGCCCGAGGCTCCCGGAGCATCGCGCTGGGAGAAG...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp TTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCCCCGAGGCCCTCTGGGTGTaGCTGCTACAGCCGTCAGGC +
Preference number: 4 (lower is better)
Translates to: FPGLAGTTTLISKPIPAPEALWV*LLQPSG
Trigger: GCCTGACGGCTGTAGCAGGCACACCCAGAGGGCCTC...GGGGGCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGGAGCCGCAGGCGTGTaGCAGGCGGGCTGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGGAAGV*QAGCQL
Trigger: AAGCTGGCAGCCCGCCTGGCACACGCCTGCGGCTCC...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTAGCTGGAGCAGCTCCTaGGGCCAGCGGGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGSWSSS*GQRERR
Trigger: CCTGCGCTCCCGCTGGCCGCAGGAGCTGCTCCAGCT...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCAGCTGGAGCAGCTCCTaGGGCCAGCGGGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCSWSSS*GQRERR
Trigger: CCTGCGCTCCCGCTGGCCGCAGGAGCTGCTCCAGCT...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp TTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCCCCTGGGTCTGTCCCCGGTaGACACCCCTCAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: FPGLAGTTTLISKPIPAPWVCPR*TPLRAL
Trigger: CAGAGCCCTGAGGGGTGTCCACCGGGGACAGACCCA...GGGGGCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCGGTGCCACCAGCAATaGGGTGCCGAGGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCRCHQQ*GAEALW
Trigger: CCAGAGGGCCTCGGCACCTCATTGCTGGTGGCACCG...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp TTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCCCCCCACCAGCAATGAGGTaGCGAGGCCCTCTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: FPGLAGTTTLISKPIPAPPPAMR*RGPLGV
Trigger: CACACCCAGAGGGCCTCGGCACCTCATTGCTGGTGG...GGGGGCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAA
66% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp TTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCCCCCAGCCGGTGAAGGCCTaGATGCCCAGGAACCAGAGC +
Preference number: 4 (lower is better)
Translates to: FPGLAGTTTLISKPIPAPQPVKA*MPRNQS
Trigger: GCTCTGGTTCCTGGGCATGCAGGCCTTCACCGGCTG...GGGGGCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp TTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCCCCGGCTCTGACAGGCACTaGTCCAAGGCAGCCATGCGG +
Preference number: 4 (lower is better)
Translates to: FPGLAGTTTLISKPIPAPGSDRH*SKAAMR
Trigger: CCGCATGGCTGCCTTGGAGCAGTGCCTGTCAGAGCC...GGGGGCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGGGTCTGAGCCCGGGGTaGCCCGCGCCACGTGGGACT +
Preference number: 4 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQGLSPG*PAPRGT
Trigger: AGTCCCACGTGGCGCGGGCCACCCCGGGCTCAGACC...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGCCCGGCACAGCCGGTTaGCCCGCGCCAGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQPGTAG*PAPAPP
Trigger: TGGTGGAGCTGGCGCGGGCCAACCGGCTGTGCCGGG...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTCCATGCGGTAGTGGCTaGCCGTCTCCTCGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGPCGSG*PSPRPP
Trigger: AGGCGGGCGAGGAGACGGCCAGCCACTACCGCATGG...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCCATGCGGTAGTGGCTaGCCGTCTCCTCGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCPCGSG*PSPRPP
Trigger: AGGCGGGCGAGGAGACGGCCAGCCACTACCGCATGG...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTCTCTCTGCCCGCCCCTaGGTCTGTCCCCGGTGGACA +
Preference number: 4 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGLSARP*VCPRWT
Trigger: TGTCCACCGGGGACAGACCCAGGGGCGGGCAGAGAG...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGGCCGGCAGGGCACATaGGCTGAGGCAGTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGGRQGT*AEAVCS
Trigger: GGAGCAGACTGCCTCAGCCCATGTGCCCTGCCGGCC...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCACGACAGGGCGGCGATaGGATCACACAGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCTTGRR*DHTGCG
Trigger: GCCGCAGCCTGTGTGATCTCATCGCCGCCCTGTCGT...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356090.8
CDS-3UTR TCA 90 bp TTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCCCCCTCCTTACGCAAGGATaGGGTCTCCTCGGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: FPGLAGTTTLISKPIPAPLLTQG*GLLGQP
Trigger: TGGCTGGCCGAGGAGACCTCATCCTTGCGTAAGGAG...GGGGGCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCGAGGCACACAGCCGGTaGAGGCCTGCATGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCEAHSR*RPACPG
Trigger: TCCTGGGCATGCAGGCCTTCACCGGCTGTGTGCCTC...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCGAGGCCCTCTGGGTGTaGCTGCTACAGCCGTCAGGC +
Preference number: 4 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCEALWV*LLQPSG
Trigger: GCCTGACGGCTGTAGCAGGCACACCCAGAGGGCCTC...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCAGCCCCACCAGGAGTaGCAGGGCCTGGTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCQPHQE*QGLVKA
Trigger: GGCTTTGACCAGGCCCTGGCACTCCTGGTGGGGCTG...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp TTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCCCCGCCAGGAGCTCAGCTTaGTTCCCAGGATGCGTGCCA +
Preference number: 4 (lower is better)
Translates to: FPGLAGTTTLISKPIPAPARSSA*FPGCVP
Trigger: TGGCACGCATCCTGGGAAGCAAGCTGAGCTCCTGGC...GGGGGCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp TTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCCCCCCTCTTTCACCTCCGTaGCCGTCTCCTCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: FPGLAGTTTLISKPIPAPPLSPP*PSPPVP
Trigger: TGGCACTGGAGGAGACGGGCACGGAGGTGAAAGAGG...GGGGGCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAA
64% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCGGTAGCGCTCCAGGGTaGGGTTTCGGCCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCGSAPG*GFGPLP
Trigger: AGGCAGAGGGCCGAAACCCCACCCTGGAGCGCTACC...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGGTAGCGCTCCAGGGTaGGGTTTCGGCCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGGSAPG*GFGPLP
Trigger: AGGCAGAGGGCCGAAACCCCACCCTGGAGCGCTACC...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp TTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCCCCGCTCGCTGTCATTCTTaGCCTCACGGAGGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: FPGLAGTTTLISKPIPAPARCHS*PHGGLP
Trigger: TGGGAGCCCTCCGTGAGGCCAAGAATGACAGCGAGC...GGGGGCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp TTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCCCCCATCCGGCGCCTCCTTaGTGGTCAGGAGACGATTGG +
Preference number: 4 (lower is better)
Translates to: FPGLAGTTTLISKPIPAPHPAPP*WSGDDW
Trigger: CCAATCGTCTCCTGACCACCAAGGAGGCGCCGGATG...GGGGGCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp TTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCCCCAAAGCCCGCAGAACATaGTCAGGGCAGCCATCCGGC +
Preference number: 4 (lower is better)
Translates to: FPGLAGTTTLISKPIPAPKARRT*SGQPSG
Trigger: GCCGGATGGCTGCCCTGACCATGTTCTGCGGGCTTT...GGGGGCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp TTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCCCCTGCCCCAGGTATGCCTaGCATAGGGCAGACACGGTG +
Preference number: 4 (lower is better)
Translates to: FPGLAGTTTLISKPIPAPCPRYA*HRADTV
Trigger: CACCGTGTCTGCCCTATGCCAGGCATACCTGGGGCA...GGGGGCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp TTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCCCCGGGAGATGGCCAGGTTaGCCACCTGCTGGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: FPGLAGTTTLISKPIPAPGRWPG*PPAGKG
Trigger: ACCTTTCCCAGCAGGTGGCCAACCTGGCCATCTCCC...GGGGGCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGGGTGGTGGGGGAGATaGCCAGGTTGGCCACCTGCT +
Preference number: 4 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGGWWGR*PGWPPA
Trigger: AGCAGGTGGCCAACCTGGCCATCTCCCCCACCACCC...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACGGTCTGAGCCCGGGGTaGCCCGCGCCACGTGGGACT +
Preference number: 4 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHGLSPG*PAPRGT
Trigger: AGTCCCACGTGGCGCGGGCCACCCCGGGCTCAGACC...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGCCCGGCACAGCCGGTTaGCCCGCGCCAGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRPGTAG*PAPAPP
Trigger: TGGTGGAGCTGGCGCGGGCCAACCGGCTGTGCCGGG...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp TTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCCCCAAAGGTAGTCCCTGCTaGAGCCGCCAGTCGCGTCTC +
Preference number: 4 (lower is better)
Translates to: FPGLAGTTTLISKPIPAPKGSPC*SRQSRL
Trigger: GAGACGCGACTGGCGGCTCCAGCAGGGACTACCTTT...GGGGGCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGGCCCCTCCTCCCCCTTaGTCTCGCGGCCGGCATTGC +
Preference number: 4 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQAPPPP*SRGRHC
Trigger: GCAATGCCGGCCGCGAGACCAAGGGGGAGGAGGGGC...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS-3UTR TCA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCGTGGCCAGGGGATGTaGGTTCCCACTGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCRGQGM*VPTAAG
Trigger: TCCTGCAGCAGTGGGAACTCACATCCCCTGGCCACG...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp TTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCCCCAGTGCAGGGTTGCGCTaGCAGGAGCTCAGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: FPGLAGTTTLISKPIPAPSAGLR*QELSLL
Trigger: AAGCAAGCTGAGCTCCTGGCAGCGCAACCCTGCACT...GGGGGCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTGTGCCAGGCGGGCTaGCAGCTTCAGTGCAGGGTT +
Preference number: 4 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGVCQAG*QLQCRV
Trigger: AACCCTGCACTGAAGCTGGCAGCCCGCCTGGCACAC...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGACTTGCTCCCGGAGCTaGCCGCCGGGATCCAGTCGG +
Preference number: 4 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQTCSRS*PPGSSR
Trigger: CCGACTGGATCCCGGCGGGCAGCTCCGGGAGCAAGT...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGGCAGGGCCAGGAACTTaGTCCCGGAGCTGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRAGPGT*SRSCPP
Trigger: CGGCGGGCAGCTCCGGGAGCAAGTTCCTGGCCCTGC...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp TTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCCCCGAAGAGGATGGCAGCTaGGAAGAACCCTCGGGATGC +
Preference number: 4 (lower is better)
Translates to: FPGLAGTTTLISKPIPAPEEDGS*EEPSGC
Trigger: GCATCCCGAGGGTTCTTCGCAGCTGCCATCCTCTTC...GGGGGCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACGTCTCCTCGCCCGCCTaGAGCCTCATGGCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHVSSPA*SLMASR
Trigger: CCGGGAGGCCATGAGGCTGCAGGCGGGCGAGGAGAC...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp TTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCCCCCTGTCTGCCCCAGGTTaGCCTAGGATGGAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: FPGLAGTTTLISKPIPAPLSAPG*PRMEAV
Trigger: AACTGCCTCCATCCTAGGGCAACCTGGGGCAGACAG...GGGGGCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp TTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCCCCAGGTTGGCCACCTGCTaGGAAAGGTCATTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: FPGLAGTTTLISKPIPAPRLATC*ERSLAS
Trigger: GGAGGCCAATGACCTTTCCCAGCAGGTGGCCAACCT...GGGGGCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp ATGGGAGGATATGGCAGGGCCACTTGGCAGCAACCCAGTGACATGGGGGCGGGGGGGAGATGGCCAGGTTaGCCACCTGCTGGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: MGGYGRATWQQPSDMGAGGRWPG*PPAGKG
Trigger: ACCTTTCCCAGCAGGTGGCCAACCTGGCCATCTCCC...CCCCGCCCCCATGTCACTGGGTTGCTGCCAAGTGGCCCTGCCATATCCTCCCAT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR CCA 90 bp ACATGGGGGCGGGGGTGCAGTGTTTCATCTGTACTTGAGAGCACCAGAGCCCCCGGGTGGTGGGGGAGATaGCCAGGTTGGCCACCTGCT +
Preference number: 4 (lower is better)
Translates to: TWGRGCSVSSVLESTRAPGWWGR*PGWPPA
Trigger: AGCAGGTGGCCAACCTGGCCATCTCCCCCACCACCC...GGGGGCTCTGGTGCTCTCAAGTACAGATGAAACACTGCACCCCCGCCCCCATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR CCA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGTGGCCAGGTGGGCCCTaGGGTGGTGGGGGAGATGGC +
Preference number: 4 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRWPGGP*GGGGDG
Trigger: GCCATCTCCCCCACCACCCCAGGGCCCACCTGGCCA...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp TTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCCCCGAACCCTCGGGATGCTaGTGTTCCCTGAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: FPGLAGTTTLISKPIPAPEPSGC*CSLKSW
Trigger: CCAGCTCTTCAGGGAACACCAGCATCCCGAGGGTTC...GGGGGCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTGGCCCGCGCCACGTaGGACTGTGATAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGVARAT*DCDRKR
Trigger: CCTCTTCCTATCACAGTCCCACGTGGCGCGGGCCAC...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGGGTGCAGACTGCCTCTaGAGAGCGGGCGGCGAGAGG +
Preference number: 4 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQGADCL*RAGGER
Trigger: CCTCTCGCCGCCCGCTCTCCAGAGGCAGTCTGCACC...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS-3UTR CCA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGCCCGAGTCTGGGGGCTaGGGCTCGAGCGAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRPESGG*GSSEGG
Trigger: GCCTCCTTCGCTCGAGCCCCAGCCCCCAGACTCGGG...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS-3UTR TCA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGCGGTGCCACCAGCAATaGGGTGCCGAGGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRRCHQQ*GAEALW
Trigger: CCAGAGGGCCTCGGCACCTCATTGCTGGTGGCACCG...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTTCTGGAAATCCTCACTaGGGCCCCGCAACACGGCCA +
Preference number: 4 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGSGNPH*GPATRP
Trigger: TGGCCGTGTTGCGGGGCCTCAGTGAGGATTTCCAGA...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCGGATCCCCAACTCCATaGGGGCATAGCAGGCGGTCA +
Preference number: 4 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCGSPTP*GHSRRS
Trigger: TGACCGCCTGCTATGCCCTCATGGAGTTGGGGATCC...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGGAGGCACACAGCCGGTaGAGGCCTGCATGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQEAHSR*RPACPG
Trigger: TCCTGGGCATGCAGGCCTTCACCGGCTGTGTGCCTC...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGCACCCCTCAGGGCTCTaGCAGGCACTGCTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQHPSGL*QALLQG
Trigger: GCCTTGGAGCAGTGCCTGTCAGAGCCCTGAGGGGTG...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCGCAGTTCCTTACACTTaGGGGGTGGGCACCATGCCC +
Preference number: 4 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCAVPYT*GVGTMP
Trigger: GGGCATGGTGCCCACCCCTCAAGTGTAAGGAACTGC...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGGAGCCTCGGGCCGCTaGTCACGCCGCGTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: QWSVITGETCGFWGSVPPGASGR*SRRVAH
Trigger: GTGGGCAACGCGGCGTGAGCAGCGGCCCGAGGCTCC...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGGCTTCCCAGGATGCGTaGCAGCCCGGCCTGCAGATC +
Preference number: 4 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQASQDA*QPGLQI
Trigger: GATCTGCAGGCCGGGCTGGCACGCATCCTGGGAAGC...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCGCCAGGAGCTCAGCTTaGTTCCCAGGATGCGTGCCA +
Preference number: 4 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCARSSA*FPGCVP
Trigger: TGGCACGCATCCTGGGAAGCAAGCTGAGCTCCTGGC...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp TATCAATGGCCTAAGCCTGCTGTCTGCCCAAGGGAGCCAAGGGCAAGAGCCAAAGCAGGGCCAGGAACTTaGTCCCGGAGCTGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: YQWPKPAVCPREPRARAKAGPGT*SRSCPP
Trigger: CGGCGGGCAGCTCCGGGAGCAAGTTCCTGGCCCTGC...TTTGGCTCTTGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGGCCATTGATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCGCCAGGTTGGCCACCTaGTGGGAAAGGTCATTGGCC +
Preference number: 4 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCARLAT*WERSLA
Trigger: GGCCAATGACCTTTCCCAGCAGGTGGCCAACCTGGC...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp GGGCCACTTGGCAGCAACCCAGTGACATGGGGGCGGGGGTGCAGTGTTTCATCTGCCAGGTTGGCCACCTaGTGGGAAAGGTCATTGGCC +
Preference number: 4 (lower is better)
Translates to: GPLGSNPVTWGRGCSVSSARLAT*WERSLA
Trigger: GGCCAATGACCTTTCCCAGCAGGTGGCCAACCTGGC...AGATGAAACACTGCACCCCCGCCCCCATGTCACTGGGTTGCTGCCAAGTGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR GCA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGCAGGTCGGCCCAGATaGCCTCATACTCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGAGRPR*PHTQGT
Trigger: TGTCCCCTGAGTATGAGGGCATCTGGGCCGACCTGC...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGGTCTCCTCGCCCGCCTaGAGCCTCATGGCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: TTVAVECNHWGNMRILGKVSSPA*SLMASR
Trigger: CCGGGAGGCCATGAGGCTGCAGGCGGGCGAGGAGAC...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGAGGGGTGGGCACCATaGCCTTGCCCTCAGAAAAGC +
Preference number: 4 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGEGWAP*PCPQKS
Trigger: GCTTTTCTGAGGGCAAGGGCATGGTGCCCACCCCTC...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGCTGGAGCCTCCCTCCTaGAGGGGAGCCAGACATCGG +
Preference number: 4 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQLEPPS*RGARHR
Trigger: CCGATGTCTGGCTCCCCTGCAGGAGGGAGGCTCCAG...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCTGGGCTGAGGCAGTCTaGTCCTGCCAGCCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCWAEAV*SCQPCL
Trigger: AAGACAGGGCTGGCAGGAGCAGACTGCCTCAGCCCA...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTCCTAAGCCTGCTGTCTaGCCAAGGGAGCCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGPKPAV*PREPRA
Trigger: TGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGG...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGAGGCAAGGTGCAGACTaGCTCTGGAGAGCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQRQGAD*LWRAGG
Trigger: GCCGCCCGCTCTCCAGAGGCAGTCTGCACCTTGCCT...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS-3UTR GCA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCGCGAAGGAGGCAAGGTaGAGACTGCCTCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCAKEAR*RLPLES
Trigger: GCTCTCCAGAGGCAGTCTGCACCTTGCCTCCTTCGC...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS-3UTR GCA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTCTTGCTTGTGGGTATTaGCCGAGTCTGGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGLACGY*PSLGAG
Trigger: CCCAGCCCCCAGACTCGGGCAATACCCACAAGCAAG...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS-3UTR GCA 90 bp TATCAATGGCCTAAGCCTGCTGTCTGCCCAAGGGAGCCAAGGGCAAGAGCCAAACTGGCTCCAGGCTGCTaGAGCTCCACCCCCACCCCC +
Preference number: 4 (lower is better)
Translates to: YQWPKPAVCPREPRARAKLAPGC*SSTPTP
Trigger: GGGGGTGGGGGTGGAGCTGCAGCAGCCTGGAGCCAG...TTTGGCTCTTGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGGCCATTGATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS-3UTR GCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACCTGCTCACGCCGCGTTaGCCACTCCTGGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHLLTPR*PLLAPG
Trigger: GCCTGGAGCCAGGAGTGGGCAACGCGGCGTGAGCAG...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS-3UTR CCA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTAAAGCCCGCAGAACATaGTCAGGGCAGCCATCCGGC +
Preference number: 4 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGKARRT*SGQPSG
Trigger: GCCGGATGGCTGCCCTGACCATGTTCTGCGGGCTTT...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACGGTGCCGAGGCCCTCTaGGTGTGCCTGCTACAGCCG +
Preference number: 4 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHGAEAL*VCLLQP
Trigger: CGGCTGTAGCAGGCACACCCAGAGGGCCTCGGCACC...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGGCCAGGTGGGCCCTaGGGTGGTGGGGGAGATGGC +
Preference number: 4 (lower is better)
Translates to: TTVAVECNHWGNMRILGKWPGGP*GGGGDG
Trigger: GCCATCTCCCCCACCACCCCAGGGCCCACCTGGCCA...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCTCTTCAACGGTCAGGTaGCACCAGCCAGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCSSTVR*HQPGRR
Trigger: CCTCCTGCCTGGCTGGTGCCACCTGACCGTTGAAGA...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCAGCACCGAGGTGTCGTaGCCAGGGGATGTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCSTEVS*PGDVSS
Trigger: GGAACTCACATCCCCTGGCCACGACACCTCGGTGCT...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGAGGGCTAGCACTGCCTaGTCTGAGCCCGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRRASTA*SEPGVA
Trigger: GGCCACCCCGGGCTCAGACCAGGCAGTGCTAGCCCT...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp TATCAATGGCCTAAGCCTGCTGTCTGCCCAAGGGAGCCAAGGGCAAGAGCCAAACGGTGCCACCAGCAATaGGGTGCCGAGGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: YQWPKPAVCPREPRARAKRCHQQ*GAEALW
Trigger: CCAGAGGGCCTCGGCACCTCATTGCTGGTGGCACCG...TTTGGCTCTTGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGGCCATTGATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTCTATGGCCTCCTTCATaGCGCTCACGAGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGLWPPS*RSRAAP
Trigger: AGGTGCAGCTCGTGAGCGTCATGAAGGAGGCCATAG...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCTATGGCCTCCTTCATaGCGCTCACGAGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCLWPPS*RSRAAP
Trigger: AGGTGCAGCTCGTGAGCGTCATGAAGGAGGCCATAG...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACCACCCCTCAGGGCTCTaGCAGGCACTGCTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHHPSGL*QALLQG
Trigger: GCCTTGGAGCAGTGCCTGTCAGAGCCCTGAGGGGTG...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCGGGGACAACCACGTTaGTTTCCAAGCCGATCCCTG +
Preference number: 4 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCRGQPR*FPSRSL
Trigger: CAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCG...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCGGGCCCGAAGGGGGCTaGGCTCACCAGGCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: SSDPGSLKLIGRTAISMAGPEGG*AHQAAA
Trigger: GGCCGCAGCCTGGTGAGCTCAGCCCCCTTCGGGCCC...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373243.7
CDS-3UTR GCA 90 bp GGAGGCAGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAGGAGCCTCGGGCCGCTaGTCACGCCGCGTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: GGSSDPGSLKLIGRTAISGASGR*SRRVAH
Trigger: GTGGGCAACGCGGCGTGAGCAGCGGCCCGAGGCTCC...TGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACTGCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGCAGCCCCACCAGGAGTaGCAGGGCCTGGTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRQPHQE*QGLVKA
Trigger: GGCTTTGACCAGGCCCTGGCACTCCTGGTGGGGCTG...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGGCTTCCCAGGATGCGTaGCAGCCCGGCCTGCAGATC +
Preference number: 4 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRASQDA*QPGLQI
Trigger: GATCTGCAGGCCGGGCTGGCACGCATCCTGGGAAGC...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGGCTTGCTTCCCAGGATaGGTGCCAGCCCGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRACFPG*VPARPA
Trigger: TGCAGGCCGGGCTGGCACGCATCCTGGGAAGCAAGC...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp GTGTGTGTGTGTGTGTGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTGGGGAGCCGCAGGCGTGTaGCAGGCGGGCTGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: VCVCVWSPWVYKKGSPCWGAAGV*QAGCQL
Trigger: AAGCTGGCAGCCCGCCTGGCACACGCCTGCGGCTCC...CCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGGAGCCGCAGGCGTGTaGCAGGCGGGCTGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: QWSVITGETCGFWGSVPPGAAGV*QAGCQL
Trigger: AAGCTGGCAGCCCGCCTGGCACACGCCTGCGGCTCC...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp GTGTGTGTGTGTGTGTGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTGGGCAGGGCCAGGAACTTaGTCCCGGAGCTGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: VCVCVWSPWVYKKGSPCWAGPGT*SRSCPP
Trigger: CGGCGGGCAGCTCCGGGAGCAAGTTCCTGGCCCTGC...CCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGCTGCAGGAAATACTTaGACAGAAGCGAGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGAAGNT*TEARGP
Trigger: GGGCCCCCTCGCTTCTGTGCAAGTATTTCCTGCAGC...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp ATGGGAGGATATGGCAGGGCCACTTGGCAGCAACCCAGTGACATGGGGGCGGGGAGCCTTCCCTGTTGCTaGACTAGTGCTGGTAGCGAC +
Preference number: 4 (lower is better)
Translates to: MGGYGRATWQQPSDMGAGSLPCC*TSAGSD
Trigger: GTCGCTACCAGCACTAGTGCAGCAACAGGGAAGGCT...CCCCGCCCCCATGTCACTGGGTTGCTGCCAAGTGGCCCTGCCATATCCTCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR GCA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTAGCTGGAGCAGCTCCTaGGGCCAGCGGGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: QWSVITGETCGFWGSVPPSWSSS*GQRERR
Trigger: CCTGCGCTCCCGCTGGCCGCAGGAGCTGCTCCAGCT...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGGGCTCTGACAGGCACTaGTCCAAGGCAGCCATGCGG +
Preference number: 4 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQGSDRH*SKAAMR
Trigger: CCGCATGGCTGCCTTGGAGCAGTGCCTGTCAGAGCC...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp TATCAATGGCCTAAGCCTGCTGTCTGCCCAAGGGAGCCAAGGGCAAGAGCCAAACCCTCCTTCCCTCTCTaGCCGCCCCTGGGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: YQWPKPAVCPREPRARAKPSFPL*PPLGLS
Trigger: GGACAGACCCAGGGGCGGGCAGAGAGGGAAGGAGGG...TTTGGCTCTTGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGGCCATTGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCAAGAAAGGTAGTCCCTaGTGGAGCCGCCAGTCGCGT +
Preference number: 4 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCKKGSP*WSRQSR
Trigger: ACGCGACTGGCGGCTCCAGCAGGGACTACCTTTCTT...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCTGCCTGGTTCAGAGCTaGCTCGCAATCCGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCCLVQS*LAIRGH
Trigger: ATGGCCTCGGATTGCGAGCCAGCTCTGAACCAGGCA...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp TTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCCCCTCCGCCGCCGAGTTTTaGCATCTATGTCACCTGCTT +
Preference number: 4 (lower is better)
Translates to: FPGLAGTTTLISKPIPAPSAAEF*HLCHLL
Trigger: AAGCAGGTGACATAGATGCCAAAACTCGGCGGCGGA...GGGGGCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGCCGGCGCCTCCTTGGTaGTCAGGAGACGATTGGGGA +
Preference number: 4 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQPAPPW*SGDDWG
Trigger: TCCCCAATCGTCTCCTGACCACCAAGGAGGCGCCGG...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGGGGTGGTGGGGGAGATaGCCAGGTTGGCCACCTGCT +
Preference number: 4 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRGWWGR*PGWPPA
Trigger: AGCAGGTGGCCAACCTGGCCATCTCCCCCACCACCC...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp GTGTGTGTGTGTGTGTGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTGGCCGGAGAGCGTCTCCTaGCCAGGTGGGCCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: VCVCVWSPWVYKKGSPCWPESVS*PGGPWG
Trigger: ACCCCAGGGCCCACCTGGCCAGGAGACGCTCTCCGG...CCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTCCGGAGAGCGTCTCCTaGCCAGGTGGGCCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: QWSVITGETCGFWGSVPPPESVS*PGGPWG
Trigger: ACCCCAGGGCCCACCTGGCCAGGAGACGCTCTCCGG...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGAACCCTCGGGATGCTaGTGTTCCCTGAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGEPSGC*CSLKSW
Trigger: CCAGCTCTTCAGGGAACACCAGCATCCCGAGGGTTC...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp TATCAATGGCCTAAGCCTGCTGTCTGCCCAAGGGAGCCAAGGGCAAGAGCCAAAAGGGCTAGCACTGCCTaGTCTGAGCCCGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: YQWPKPAVCPREPRARAKRASTA*SEPGVA
Trigger: GGCCACCCCGGGCTCAGACCAGGCAGTGCTAGCCCT...TTTGGCTCTTGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGGCCATTGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGACACTGCCTAGCAGCTaGAGCAGCTCCTGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQTLPSS*SSSCGQ
Trigger: CTGGCCGCAGGAGCTGCTCCAGCTGCTAGGCAGTGT...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp GGAGGCAGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCACCCGGCACAGCCGGTTaGCCCGCGCCAGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: GGSSDPGSLKLIGRTAISPGTAG*PAPAPP
Trigger: TGGTGGAGCTGGCGCGGGCCAACCGGCTGTGCCGGG...TGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACTGCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGTGGGTCTGTCCCCGGTaGACACCCCTCAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRWVCPR*TPLRAL
Trigger: CAGAGCCCTGAGGGGTGTCCACCGGGGACAGACCCA...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCAGGTTGCCCTAGGATaGAGGCAGTTCAGACCCTGG +
Preference number: 4 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCQVALG*RQFRPW
Trigger: CCAGGGTCTGAACTGCCTCCATCCTAGGGCAACCTG...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCTTCACTCCGGGCTCTaGCCAATGGCAAGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCLHSGL*PMASQG
Trigger: ACCCTGACTTGCCATTGGCCAGAGCCCGGAGTGAAG...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS-3UTR CCA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGCGCGTTGCCCACTCCTaGCTCCAGGCTGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRRVAHS*LQAAAA
Trigger: AGCTGCAGCAGCCTGGAGCCAGGAGTGGGCAACGCG...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS-3UTR TCA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGCTCCTTACGCAAGGATaGGGTCTCCTCGGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQLLTQG*GLLGQP
Trigger: TGGCTGGCCGAGGAGACCTCATCCTTGCGTAAGGAG...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCGGAGCCTCGGGCCGCTaGTCACGCCGCGTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: SSDPGSLKLIGRTAISMAGASGR*SRRVAH
Trigger: GTGGGCAACGCGGCGTGAGCAGCGGCCCGAGGCTCC...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACCCCTCTGGGTGTGCCTaGTACAGCCGTCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHPSGCA*YSRQAL
Trigger: CAGTGCCTGACGGCTGTAGCAGGCACACCCAGAGGG...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGCCACCAGCAATGAGGTaGCGAGGCCCTCTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRPPAMR*RGPLGV
Trigger: CACACCCAGAGGGCCTCGGCACCTCATTGCTGGTGG...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGGCTTCCCAGGATGCGTaGCAGCCCGGCCTGCAGATC +
Preference number: 4 (lower is better)
Translates to: TTVAVECNHWGNMRILGKASQDA*QPGLQI
Trigger: GATCTGCAGGCCGGGCTGGCACGCATCCTGGGAAGC...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTACTTGCTCCCGGAGCTaGCCGCCGGGATCCAGTCGG +
Preference number: 4 (lower is better)
Translates to: QWSVITGETCGFWGSVPPTCSRS*PPGSSR
Trigger: CCGACTGGATCCCGGCGGGCAGCTCCGGGAGCAAGT...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGCTTGATCAGCCCCGGTaGGGTGACCACGAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQLDQPR*GDHEVE
Trigger: CTCAACCTCGTGGTCACCGCACCGGGGCTGATCAAG...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCAGCAGCCTTCCCTGTTaGTGCACTAGTGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCSSLPC*CTSAGS
Trigger: GCTACCAGCACTAGTGCAGCAACAGGGAAGGCTGCT...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGAAGAACCCTCGGGATaGTGGTGTTCCCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGEEPSG*WCSLKS
Trigger: GCTCTTCAGGGAACACCAGCATCCCGAGGGTTCTTC...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACGCTCCAAGGCAGCCATaGGGTAGTGGCTGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHAPRQP*GSGWPS
Trigger: AGACGGCCAGCCACTACCGCATGGCTGCCTTGGAGC...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGGCTCCAAGGCAGCCATaGGGTAGTGGCTGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRAPRQP*GSGWPS
Trigger: AGACGGCCAGCCACTACCGCATGGCTGCCTTGGAGC...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGGGGCTTCAGGGAAGATaGCTCCTCCCTCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQGLQGR*LLPPSL
Trigger: GAGGGAAGGAGGGAGGAGGCATCTTCCCTGAAGCCC...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGCTGGAGCCTCCCTCCTaGAGGGGAGCCAGACATCGG +
Preference number: 4 (lower is better)
Translates to: TTVAVECNHWGNMRILGKLEPPS*RGARHR
Trigger: CCGATGTCTGGCTCCCCTGCAGGAGGGAGGCTCCAG...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGTGGGCTGAGGCAGTCTaGTCCTGCCAGCCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQWAEAV*SCQPCL
Trigger: AAGACAGGGCTGGCAGGAGCAGACTGCCTCAGCCCA...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCCCCCATCGTCACTCTaGTGCAACACGACACAAAGG +
Preference number: 4 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCPPSSL*CNTTQR
Trigger: CCTTTGTGTCGTGTTGCAGCAGAGTGACGATGGGGG...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGGGACAGGAATCAGATaGTCAGGTGTCCAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGGTGIR*SGVQAG
Trigger: CCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCC...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCGGGACAGGAATCAGATaGTCAGGTGTCCAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCGTGIR*SGVQAG
Trigger: CCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCC...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCAGGTGTCATCAATCATaGAGCGGCGGGCAGCATCGT +
Preference number: 4 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCRCHQS*SGGQHR
Trigger: ACGATGCTGCCCGCCGCTCCATGATTGATGACACCT...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTAGGTGTCATCAATCATaGAGCGGCGGGCAGCATCGT +
Preference number: 4 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGRCHQS*SGGQHR
Trigger: ACGATGCTGCCCGCCGCTCCATGATTGATGACACCT...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGGTGCCGAGGCCCTCTaGGTGTGCCTGCTACAGCCG +
Preference number: 4 (lower is better)
Translates to: QWSVITGETCGFWGSVPPGAEAL*VCLLQP
Trigger: CGGCTGTAGCAGGCACACCCAGAGGGCCTCGGCACC...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGTGCCCCAGGTATGCCTaGCATAGGGCAGACACGGTG +
Preference number: 4 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQCPRYA*HRADTV
Trigger: CACCGTGTCTGCCCTATGCCAGGCATACCTGGGGCA...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGGGGAGATGGCCAGGTTaGCCACCTGCTGGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQGRWPG*PPAGKG
Trigger: ACCTTTCCCAGCAGGTGGCCAACCTGGCCATCTCCC...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp GGGTGCAGTGTTTCATCTGTACTTGAGAGCACCAGAGCCCCCACAAGGCCTGGCTCTTCAACGGTCAGGTaGCACCAGCCAGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GCSVSSVLESTRAPTRPGSSTVR*HQPGRR
Trigger: CCTCCTGCCTGGCTGGTGCCACCTGACCGTTGAAGA...GCCAGGCCTTGTGGGGGCTCTGGTGCTCTCAAGTACAGATGAAACACTGCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR CCA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCTGTTCCCTGAAGAGCTaGAGAGGTGCTAAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCCSLKS*RGAKEP
Trigger: CGGCTCCTTAGCACCTCTCCAGCTCTTCAGGGAACA...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACGTGGCCCGCGCCACGTaGGACTGTGATAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHVARAT*DCDRKR
Trigger: CCTCTTCCTATCACAGTCCCACGTGGCGCGGGCCAC...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp TATCAATGGCCTAAGCCTGCTGTCTGCCCAAGGGAGCCAAGGGCAAGAGCCAAATGGGTCTGTCCCCGGTaGACACCCCTCAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: YQWPKPAVCPREPRARAKWVCPR*TPLRAL
Trigger: CAGAGCCCTGAGGGGTGTCCACCGGGGACAGACCCA...TTTGGCTCTTGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGGCCATTGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGGCCGGCAGGGCACATaGGCTGAGGCAGTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: QWSVITGETCGFWGSVPPGRQGT*AEAVCS
Trigger: GGAGCAGACTGCCTCAGCCCATGTGCCCTGCCGGCC...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGTCCAGCCAGGCCAGATaGCACCAGGGGGACAGGAAT +
Preference number: 4 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQSSQAR*HQGDRN
Trigger: ATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGA...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTAGCCAGGCACCACGGTaGCAGTGGAGTGTAATCACT +
Preference number: 4 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGSQAPR*QWSVIT
Trigger: AGTGATTACACTCCACTGCCACCGTGGTGCCTGGCT...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGATCACAGAACGCACTaGGGGAGGGAAGCAAGGGAT +
Preference number: 4 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGDHRTH*GREARD
Trigger: ATCCCTTGCTTCCCTCCCCCAGTGCGTTCTGTGATC...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGGGTATTGCCCGAGTCTaGGGGCTGGGGCTCGAGCGA +
Preference number: 4 (lower is better)
Translates to: TTVAVECNHWGNMRILGKGIARV*GLGLER
Trigger: TCGCTCGAGCCCCAGCCCCCAGACTCGGGCAATACC...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS-3UTR TCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACCGCAATCCGAGGCCATaGTGCTCGCCTTGCCCAACT +
Preference number: 4 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHRNPRP*CSPCPT
Trigger: AGTTGGGCAAGGCGAGCATCATGGCCTCGGATTGCG...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356090.8
ENST00000373243.7
CDS-3UTR TCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACTCTGGAAATCCTCACTaGGGCCCCGCAACACGGCCA +
Preference number: 4 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHSGNPH*GPATRP
Trigger: TGGCCGTGTTGCGGGGCCTCAGTGAGGATTTCCAGA...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGCTCCTTCTGCTTCTCTaGCCCCACCTGCAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQLLLLL*PHLQQV
Trigger: TACCTGCTGCAGGTGGGGTCAGAGAAGCAGAAGGAG...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp TATCAATGGCCTAAGCCTGCTGTCTGCCCAAGGGAGCCAAGGGCAAGAGCCAAACGTGGCCAGGGGATGTaGGTTCCCACTGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: YQWPKPAVCPREPRARAKRGQGM*VPTAAG
Trigger: TCCTGCAGCAGTGGGAACTCACATCCCCTGGCCACG...TTTGGCTCTTGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGGCCATTGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp TATCAATGGCCTAAGCCTGCTGTCTGCCCAAGGGAGCCAAGGGCAAGAGCCAAAGTGTGCCAGGCGGGCTaGCAGCTTCAGTGCAGGGTT +
Preference number: 4 (lower is better)
Translates to: YQWPKPAVCPREPRARAKVCQAG*QLQCRV
Trigger: AACCCTGCACTGAAGCTGGCAGCCCGCCTGGCACAC...TTTGGCTCTTGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGGCCATTGATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACGCCAGGTTGGCCACCTaGTGGGAAAGGTCATTGGCC +
Preference number: 4 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHARLAT*WERSLA
Trigger: GGCCAATGACCTTTCCCAGCAGGTGGCCAACCTGGC...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCGTCTCCTCGCCCGCCTaGAGCCTCATGGCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: SSDPGSLKLIGRTAISMAVSSPA*SLMASR
Trigger: CCGGGAGGCCATGAGGCTGCAGGCGGGCGAGGAGAC...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGTGGGCTGAGGCAGTCTaGTCCTGCCAGCCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRWAEAV*SCQPCL
Trigger: AAGACAGGGCTGGCAGGAGCAGACTGCCTCAGCCCA...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGCTAAGCAGTAGGGGGTaGCGCCGTTGCCGCCATCTT +
Preference number: 4 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRLSSRG*RRCRHL
Trigger: AAGATGGCGGCAACGGCGGCACCCCCTACTGCTTAG...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS-3UTR CCA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGTGCCTGGTTCAGAGCTaGCTCGCAATCCGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQCLVQS*LAIRGH
Trigger: ATGGCCTCGGATTGCGAGCCAGCTCTGAACCAGGCA...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTTCCGCCGCCGAGTTTTaGCATCTATGTCACCTGCTT +
Preference number: 4 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGSAAEF*HLCHLL
Trigger: AAGCAGGTGACATAGATGCCAAAACTCGGCGGCGGA...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGCCGGCGCCTCCTTGGTaGTCAGGAGACGATTGGGGA +
Preference number: 4 (lower is better)
Translates to: TTVAVECNHWGNMRILGKPAPPW*SGDDWG
Trigger: TCCCCAATCGTCTCCTGACCACCAAGGAGGCGCCGG...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp GGAGGCAGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAGGTGCCGAGGCCCTCTaGGTGTGCCTGCTACAGCCG +
Preference number: 4 (lower is better)
Translates to: GGSSDPGSLKLIGRTAISGAEAL*VCLLQP
Trigger: CGGCTGTAGCAGGCACACCCAGAGGGCCTCGGCACC...TGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACTGCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCGCATCCTCAGCTTTCTaGAAATCCTCACTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCASSAF*KSSLRP
Trigger: GGGCCTCAGTGAGGATTTCCAGAAAGCTGAGGATGC...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGAGGTTGGCCACCTGCTaGGAAAGGTCATTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQRLATC*ERSLAS
Trigger: GGAGGCCAATGACCTTTCCCAGCAGGTGGCCAACCT...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGGGTGGTGGGGGAGATaGCCAGGTTGGCCACCTGCT +
Preference number: 4 (lower is better)
Translates to: QWSVITGETCGFWGSVPPGWWGR*PGWPPA
Trigger: AGCAGGTGGCCAACCTGGCCATCTCCCCCACCACCC...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCTGGCCAGGTGGGCCCTaGGGTGGTGGGGGAGATGGC +
Preference number: 4 (lower is better)
Translates to: SSDPGSLKLIGRTAISMAWPGGP*GGGGDG
Trigger: GCCATCTCCCCCACCACCCCAGGGCCCACCTGGCCA...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGAGCACCGAGGTGTCGTaGCCAGGGGATGTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRSTEVS*PGDVSS
Trigger: GGAACTCACATCCCCTGGCCACGACACCTCGGTGCT...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTGATAGGAAGAGGATaGCAGCTGCGAAGAACCCTC +
Preference number: 4 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGVIGRG*QLRRTL
Trigger: GAGGGTTCTTCGCAGCTGCCATCCTCTTCCTATCAC...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp GGAGGCAGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAAGGGCTAGCACTGCCTaGTCTGAGCCCGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GGSSDPGSLKLIGRTAISRASTA*SEPGVA
Trigger: GGCCACCCCGGGCTCAGACCAGGCAGTGCTAGCCCT...TGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACTGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp TATCAATGGCCTAAGCCTGCTGTCTGCCCAAGGGAGCCAAGGGCAAGAGCCAAAACACTGCCTAGCAGCTaGAGCAGCTCCTGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: YQWPKPAVCPREPRARAKTLPSS*SSSCGQ
Trigger: CTGGCCGCAGGAGCTGCTCCAGCTGCTAGGCAGTGT...TTTGGCTCTTGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGGCCATTGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp TTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCCCCGTGGAGTGTAATCACTaGGGAAACATGCGGATTCTG +
Preference number: 4 (lower is better)
Translates to: FPGLAGTTTLISKPIPAPVECNH*GNMRIL
Trigger: CAGAATCCGCATGTTTCCCCAGTGATTACACTCCAC...GGGGGCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACCCGGGCTCTGGCCAATaGCAAGTCAGGGTGCTAAGC +
Preference number: 4 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHPGSGQ*QVRVLS
Trigger: GCTTAGCACCCTGACTTGCCATTGGCCAGAGCCCGG...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS-3UTR CCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACCTCGACAGGGCACGATaGTGTCGCGATATGGCGCGA +
Preference number: 4 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHLDRAR*CRDMAR
Trigger: TCGCGCCATATCGCGACACCATCGTGCCCTGTCGAG...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373243.7
CDS-3UTR CCA 90 bp ACTTGGCAGCAACCCAGTGACATGGGGGCGGGGGTGCAGTGTTTCATCTGTACTGTCGGATGGCCTGTGTaGAGTCCTGGCTCTGGCACT +
Preference number: 4 (lower is better)
Translates to: TWQQPSDMGAGVQCFICTVGWPV*SPGSGT
Trigger: AGTGCCAGAGCCAGGACTCCACACAGGCCATCCGAC...AGTACAGATGAAACACTGCACCCCCGCCCCCATGTCACTGGGTTGCTGCCAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR TCA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGCGCAATCCGAGGCCATaGTGCTCGCCTTGCCCAACT +
Preference number: 4 (lower is better)
Translates to: TTVAVECNHWGNMRILGKRNPRP*CSPCPT
Trigger: AGTTGGGCAAGGCGAGCATCATGGCCTCGGATTGCG...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356090.8
ENST00000373243.7
CDS-3UTR TCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACCTCCTTCTGCTTCTCTaGCCCCACCTGCAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHLLLLL*PHLQQV
Trigger: TACCTGCTGCAGGTGGGGTCAGAGAAGCAGAAGGAG...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGCTCCTTCTGCTTCTCTaGCCCCACCTGCAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRLLLLL*PHLQQV
Trigger: TACCTGCTGCAGGTGGGGTCAGAGAAGCAGAAGGAG...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp GTGTGTGTGTGTGTGTGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTGGCGTGGCCAGGGGATGTaGGTTCCCACTGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: VCVCVWSPWVYKKGSPCWRGQGM*VPTAAG
Trigger: TCCTGCAGCAGTGGGAACTCACATCCCCTGGCCACG...CCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGGCAGTTCCTTACACTTaGGGGGTGGGCACCATGCCC +
Preference number: 4 (lower is better)
Translates to: TTVAVECNHWGNMRILGKAVPYT*GVGTMP
Trigger: GGGCATGGTGCCCACCCCTCAAGTGTAAGGAACTGC...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp TATCAATGGCCTAAGCCTGCTGTCTGCCCAAGGGAGCCAAGGGCAAGAGCCAAAGCAGTTCCTTACACTTaGGGGGTGGGCACCATGCCC +
Preference number: 4 (lower is better)
Translates to: YQWPKPAVCPREPRARAKAVPYT*GVGTMP
Trigger: GGGCATGGTGCCCACCCCTCAAGTGTAAGGAACTGC...TTTGGCTCTTGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGGCCATTGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCCCCCCGCACCGCTCTTaGCGAATCCGCGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SSDPGSLKLIGRTAISMAPPHRS*RIRGCF
Trigger: GAAGCAGCCGCGGATTCGTCAAGAGCGGTGCGGGGG...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS-3UTR GCA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGAGCAGGGCTGCAAACTaGTCGCTGTCATTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQSRAAN*SLSFLA
Trigger: GGCCAAGAATGACAGCGAGCAGTTTGCAGCCCTGCT...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp GTGTGTGTGTGTGTGTGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTGGCCCTCTGGGTGTGCCTaGTACAGCCGTCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: VCVCVWSPWVYKKGSPCWPSGCA*YSRQAL
Trigger: CAGTGCCTGACGGCTGTAGCAGGCACACCCAGAGGG...CCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGGCAGAGCTCAAACTTaGTGGCATCCTCAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGGRAQT*WHPQLS
Trigger: AGAAAGCTGAGGATGCCAGCAAGTTTGAGCTCTGCC...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp GGAGGCAGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAGCTTGCTTCCCAGGATaGGTGCCAGCCCGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: GGSSDPGSLKLIGRTAISACFPG*VPARPA
Trigger: TGCAGGCCGGGCTGGCACGCATCCTGGGAAGCAAGC...TGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACTGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACAGTGCAGGGTTGCGCTaGCAGGAGCTCAGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHSAGLR*QELSLL
Trigger: AAGCAAGCTGAGCTCCTGGCAGCGCAACCCTGCACT...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp TATCAATGGCCTAAGCCTGCTGTCTGCCCAAGGGAGCCAAGGGCAAGAGCCAAAGCTTCAGTGCAGGGTTaGGCTGCCAGGAGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: YQWPKPAVCPREPRARAKASVQG*AARSSA
Trigger: AGCTGAGCTCCTGGCAGCGCAACCCTGCACTGAAGC...TTTGGCTCTTGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGGCCATTGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGGCTTCAGTGCAGGGTTaGGCTGCCAGGAGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: TTVAVECNHWGNMRILGKASVQG*AARSSA
Trigger: AGCTGAGCTCCTGGCAGCGCAACCCTGCACTGAAGC...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTGTGCCAGGCGGGCTaGCAGCTTCAGTGCAGGGTT +
Preference number: 4 (lower is better)
Translates to: QWSVITGETCGFWGSVPPVCQAG*QLQCRV
Trigger: AACCCTGCACTGAAGCTGGCAGCCCGCCTGGCACAC...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCACTTGCTCCCGGAGCTaGCCGCCGGGATCCAGTCGG +
Preference number: 4 (lower is better)
Translates to: SSDPGSLKLIGRTAISMATCSRS*PPGSSR
Trigger: CCGACTGGATCCCGGCGGGCAGCTCCGGGAGCAAGT...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGGCCAGGTTGGCCACCTaGTGGGAAAGGTCATTGGCC +
Preference number: 4 (lower is better)
Translates to: TTVAVECNHWGNMRILGKARLAT*WERSLA
Trigger: GGCCAATGACCTTTCCCAGCAGGTGGCCAACCTGGC...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGCTTGATCAGCCCCGGTaGGGTGACCACGAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: TTVAVECNHWGNMRILGKLDQPR*GDHEVE
Trigger: CTCAACCTCGTGGTCACCGCACCGGGGCTGATCAAG...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp TATCAATGGCCTAAGCCTGCTGTCTGCCCAAGGGAGCCAAGGGCAAGAGCCAAAGCAGGTCGGCCCAGATaGCCTCATACTCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: YQWPKPAVCPREPRARAKAGRPR*PHTQGT
Trigger: TGTCCCCTGAGTATGAGGGCATCTGGGCCGACCTGC...TTTGGCTCTTGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGGCCATTGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp GTGTGTGTGTGTGTGTGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTGGCAGCCGGTGAAGGCCTaGATGCCCAGGAACCAGAGC +
Preference number: 4 (lower is better)
Translates to: VCVCVWSPWVYKKGSPCWQPVKA*MPRNQS
Trigger: GCTCTGGTTCCTGGGCATGCAGGCCTTCACCGGCTG...CCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp GTGTGTGTGTGTGTGTGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTGGGCTCCAAGGCAGCCATaGGGTAGTGGCTGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: VCVCVWSPWVYKKGSPCWAPRQP*GSGWPS
Trigger: AGACGGCCAGCCACTACCGCATGGCTGCCTTGGAGC...CCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGCCTAAGCCTGCTGTCTaGCCAAGGGAGCCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: TTVAVECNHWGNMRILGKPKPAV*PREPRA
Trigger: TGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGG...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGCCCCCATCGTCACTCTaGTGCAACACGACACAAAGG +
Preference number: 4 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQPPSSL*CNTTQR
Trigger: CCTTTGTGTCGTGTTGCAGCAGAGTGACGATGGGGG...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACCCGTTGCCGCCATCTTaGTTGTGGGTATTGCCCGAG +
Preference number: 4 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHPLPPS*LWVLPE
Trigger: CTCGGGCAATACCCACAAGCAAGATGGCGGCAACGG...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS-3UTR CCA 90 bp GTGTGTGTGTGTGTGTGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTGGCCGGCGCCTCCTTGGTaGTCAGGAGACGATTGGGGA +
Preference number: 4 (lower is better)
Translates to: VCVCVWSPWVYKKGSPCWPAPPW*SGDDWG
Trigger: TCCCCAATCGTCTCCTGACCACCAAGGAGGCGCCGG...CCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGCATCCGGCGCCTCCTTaGTGGTCAGGAGACGATTGG +
Preference number: 4 (lower is better)
Translates to: TTVAVECNHWGNMRILGKHPAPP*WSGDDW
Trigger: CCAATCGTCTCCTGACCACCAAGGAGGCGCCGGATG...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGAAAGCCCGCAGAACATaGTCAGGGCAGCCATCCGGC +
Preference number: 4 (lower is better)
Translates to: TTVAVECNHWGNMRILGKKARRT*SGQPSG
Trigger: GCCGGATGGCTGCCCTGACCATGTTCTGCGGGCTTT...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGAGGAAGGGCAGCAGCTaGCACACCTCCTTACGCAAG +
Preference number: 4 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRRKGSS*HTSLRK
Trigger: CTTGCGTAAGGAGGTGTGCCAGCTGCTGCCCTTCCT...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACAGGAAGGGCAGCAGCTaGCACACCTCCTTACGCAAG +
Preference number: 4 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHRKGSS*HTSLRK
Trigger: CTTGCGTAAGGAGGTGTGCCAGCTGCTGCCCTTCCT...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGCCTCGTAGAGGGTCTTaGCATAGCGGACGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRPRRGS*HSGRGR
Trigger: CCTTCCTCGTCCGCTATGCCAAGACCCTCTACGAGG...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGGCTGGGAAAGGTCATTaGCCTCCTCGGCCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: TTVAVECNHWGNMRILGKAGKGH*PPRPPR
Trigger: ACGAGGAGGCCGAGGAGGCCAATGACCTTTCCCAGC...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp TATCAATGGCCTAAGCCTGCTGTCTGCCCAAGGGAGCCAAGGGCAAGAGCCAAAGCTGGGAAAGGTCATTaGCCTCCTCGGCCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: YQWPKPAVCPREPRARAKAGKGH*PPRPPR
Trigger: ACGAGGAGGCCGAGGAGGCCAATGACCTTTCCCAGC...TTTGGCTCTTGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGGCCATTGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACAGGTTGGCCACCTGCTaGGAAAGGTCATTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHRLATC*ERSLAS
Trigger: GGAGGCCAATGACCTTTCCCAGCAGGTGGCCAACCT...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CACATCAACATGAGTTTGGCAATCTGCTGTACAAGTGAAAGATGTGGGCTGGGGTGGCCAGGTGGGCCCTaGGGTGGTGGGGGAGATGGC +
Preference number: 4 (lower is better)
Translates to: HINMSLAICCTSERCGLGWPGGP*GGGGDG
Trigger: GCCATCTCCCCCACCACCCCAGGGCCCACCTGGCCA...CCCCAGCCCACATCTTTCACTTGTACAGCAGATTGCCAAACTCATGTTGATGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR CCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCCCATGCGGTAGTGGCTaGCCGTCTCCTCGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: SSDPGSLKLIGRTAISMAPCGSG*PSPRPP
Trigger: AGGCGGGCGAGGAGACGGCCAGCCACTACCGCATGG...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCCTCTCTGCCCGCCCCTaGGTCTGTCCCCGGTGGACA +
Preference number: 4 (lower is better)
Translates to: SSDPGSLKLIGRTAISMALSARP*VCPRWT
Trigger: TGTCCACCGGGGACAGACCCAGGGGCGGGCAGAGAG...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGCAGGTTGCCCTAGGATaGAGGCAGTTCAGACCCTGG +
Preference number: 4 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRQVALG*RQFRPW
Trigger: CCAGGGTCTGAACTGCCTCCATCCTAGGGCAACCTG...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp TTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCCCCAAAGGTTTAAAGATCTaGGCCCAAAGACTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: FPGLAGTTTLISKPIPAPKGLKI*AQRLWV
Trigger: GACCCAGAGTCTTTGGGCCCAGATCTTTAAACCTTT...GGGGGCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp TATCAATGGCCTAAGCCTGCTGTCTGCCCAAGGGAGCCAAGGGCAAGAGCCAAATCCAGCCAGGCCAGATaGCACCAGGGGGACAGGAAT +
Preference number: 4 (lower is better)
Translates to: YQWPKPAVCPREPRARAKSSQAR*HQGDRN
Trigger: ATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGA...TTTGGCTCTTGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGGCCATTGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGAGCCAGGCACCACGGTaGCAGTGGAGTGTAATCACT +
Preference number: 4 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQSQAPR*QWSVIT
Trigger: AGTGATTACACTCCACTGCCACCGTGGTGCCTGGCT...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp TTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCCCCTGTGTGTGGTCCCCCTaGGTTTATAAGAAAGGTAGT +
Preference number: 4 (lower is better)
Translates to: FPGLAGTTTLISKPIPAPCVWSP*VYKKGS
Trigger: ACTACCTTTCTTATAAACCCAGGGGGACCACACACA...GGGGGCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTGTGTGTGTGTGTGTaGTCCCCCTGGGTTTATAAG +
Preference number: 4 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGVCVCV*SPWVYK
Trigger: CTTATAAACCCAGGGGGACCACACACACACACACAC...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGGATCACAGAACGCACTaGGGGAGGGAAGCAAGGGAT +
Preference number: 4 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQDHRTH*GREARD
Trigger: ATCCCTTGCTTCCCTCCCCCAGTGCGTTCTGTGATC...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTCGCGATATGGCGCGATaGAGTCGCGATAGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: QWSVITGETCGFWGSVPPRDMAR*SRDRVP
Trigger: GGGGACCCTATCGCGACTCCATCGCGCCATATCGCG...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373243.7
CDS-3UTR TCA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGGACGATTGGGGAAGGTaGAGCCGACAGCATCGAAGA +
Preference number: 4 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRDDWGR*SRQHRR
Trigger: TCTTCGATGCTGTCGGCTTCACCTTCCCCAATCGTC...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACGACGATTGGGGAAGGTaGAGCCGACAGCATCGAAGA +
Preference number: 4 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHDDWGR*SRQHRR
Trigger: TCTTCGATGCTGTCGGCTTCACCTTCCCCAATCGTC...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp GTGTGTGTGTGTGTGTGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTGGTCTGGAAATCCTCACTaGGGCCCCGCAACACGGCCA +
Preference number: 4 (lower is better)
Translates to: VCVCVWSPWVYKKGSPCWSGNPH*GPATRP
Trigger: TGGCCGTGTTGCGGGGCCTCAGTGAGGATTTCCAGA...CCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp GTGTGTGTGTGTGTGTGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTGGGGATCCCCAACTCCATaGGGGCATAGCAGGCGGTCA +
Preference number: 4 (lower is better)
Translates to: VCVCVWSPWVYKKGSPCWGSPTP*GHSRRS
Trigger: TGACCGCCTGCTATGCCCTCATGGAGTTGGGGATCC...CCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGGATGCTGGTGTTCCCTaGAGAGCTGGAGAGGTGCTA +
Preference number: 4 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRDAGVP*RAGEVL
Trigger: TAGCACCTCTCCAGCTCTTCAGGGAACACCAGCATC...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCGAGGCACACAGCCGGTaGAGGCCTGCATGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SSDPGSLKLIGRTAISMAEAHSR*RPACPG
Trigger: TCCTGGGCATGCAGGCCTTCACCGGCTGTGTGCCTC...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCCACCCCTCAGGGCTCTaGCAGGCACTGCTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: SSDPGSLKLIGRTAISMAHPSGL*QALLQG
Trigger: GCCTTGGAGCAGTGCCTGTCAGAGCCCTGAGGGGTG...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGCGGGGACAACCACGTTaGTTTCCAAGCCGATCCCTG +
Preference number: 4 (lower is better)
Translates to: TTVAVECNHWGNMRILGKRGQPR*FPSRSL
Trigger: CAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCG...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp GTGTGTGTGTGTGTGTGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTGGCGCAATCCGAGGCCATaGTGCTCGCCTTGCCCAACA +
Preference number: 4 (lower is better)
Translates to: VCVCVWSPWVYKKGSPCWRNPRP*CSPCPT
Trigger: TGTTGGGCAAGGCGAGCATCATGGCCTCGGATTGCG...CCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS-3UTR TCA 90 bp ACATGGGGGCGGGGGTGCAGTGTTTCATCTGTACTTGAGAGCACCAGAGCCCCCAATCTGCTGTACAAGTaGAAGATGTGGGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: TWGRGCSVSSVLESTRAPNLLYK*KMWAGE
Trigger: CTCCCCAGCCCACATCTTTCACTTGTACAGCAGATT...GGGGGCTCTGGTGCTCTCAAGTACAGATGAAACACTGCACCCCCGCCCCCATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR GCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACAGCAGGGCTGCAAACTaGTCGCTGTCATTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHSRAAN*SLSFLA
Trigger: GGCCAAGAATGACAGCGAGCAGTTTGCAGCCCTGCT...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp GGAGGCAGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCACCACCAGCAATGAGGTaGCGAGGCCCTCTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: GGSSDPGSLKLIGRTAISPPAMR*RGPLGV
Trigger: CACACCCAGAGGGCCTCGGCACCTCATTGCTGGTGG...TGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACTGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGCCAGGAGCTCAGCTTaGTTCCCAGGATGCGTGCCA +
Preference number: 4 (lower is better)
Translates to: QWSVITGETCGFWGSVPPARSSA*FPGCVP
Trigger: TGGCACGCATCCTGGGAAGCAAGCTGAGCTCCTGGC...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp GGAGGCAGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAGGCTGCCAGCTTCAGTaGAGGGTTGCGCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GGSSDPGSLKLIGRTAISGCQLQ*RVALPG
Trigger: TCCTGGCAGCGCAACCCTGCACTGAAGCTGGCAGCC...TGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACTGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGGCTGCAGGAAATACTTaGACAGAAGCGAGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: TTVAVECNHWGNMRILGKAAGNT*TEARGP
Trigger: GGGCCCCCTCGCTTCTGTGCAAGTATTTCCTGCAGC...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCGTGAGTTCCCACTGCTaGAGGAAATACTTGCACAGA +
Preference number: 4 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCVSSHC*RKYLHR
Trigger: TCTGTGCAAGTATTTCCTGCAGCAGTGGGAACTCAC...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp GTGTGTGTGTGTGTGTGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTGGCTTGATCAGCCCCGGTaGGGTGACCACGAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: VCVCVWSPWVYKKGSPCWLDQPR*GDHEVE
Trigger: CTCAACCTCGTGGTCACCGCACCGGGGCTGATCAAG...CCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp GCCCCCACAAGGCCTGGCCACATCAACATGAGTTTGGCAATCTGCTGTACAAGTCTTGATCAGCCCCGGTaGGGTGACCACGAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: APTRPGHINMSLAICCTSLDQPR*GDHEVE
Trigger: CTCAACCTCGTGGTCACCGCACCGGGGCTGATCAAG...ACTTGTACAGCAGATTGCCAAACTCATGTTGATGTGGCCAGGCCTTGTGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR GCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACAGCAGCCTTCCCTGTTaGTGCACTAGTGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHSSLPC*CTSAGS
Trigger: GCTACCAGCACTAGTGCAGCAACAGGGAAGGCTGCT...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGGAAGAACCCTCGGGATaGTGGTGTTCCCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIREEPSG*WCSLKS
Trigger: GCTCTTCAGGGAACACCAGCATCCCGAGGGTTCTTC...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGCAGGTCGGCCCAGATaGCCTCATACTCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: QWSVITGETCGFWGSVPPAGRPR*PHTQGT
Trigger: TGTCCCCTGAGTATGAGGGCATCTGGGCCGACCTGC...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGGGCTTCAGGGAAGATaGCTCCTCCCTCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: QWSVITGETCGFWGSVPPGLQGR*LLPPSL
Trigger: GAGGGAAGGAGGGAGGAGGCATCTTCCCTGAAGCCC...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACGGGACAGGAATCAGATaGTCAGGTGTCCAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHGTGIR*SGVQAG
Trigger: CCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCC...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGAAGAAAGGTAGTCCCTaGTGGAGCCGCCAGTCGCGT +
Preference number: 4 (lower is better)
Translates to: TTVAVECNHWGNMRILGKKKGSP*WSRQSR
Trigger: ACGCGACTGGCGGCTCCAGCAGGGACTACCTTTCTT...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCAGGGGGTGCCGCCGTTaGCGCCATCTTGCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: SSDPGSLKLIGRTAISMARGCRR*RHLACG
Trigger: CCCACAAGCAAGATGGCGGCAACGGCGGCACCCCCT...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS-3UTR CCA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGCTCGCTGTCATTCTTaGCCTCACGGAGGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: QWSVITGETCGFWGSVPPARCHS*PHGGLP
Trigger: TGGGAGCCCTCCGTGAGGCCAAGAATGACAGCGAGC...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGAGGTGTCATCAATCATaGAGCGGCGGGCAGCATCGT +
Preference number: 4 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRRCHQS*SGGQHR
Trigger: ACGATGCTGCCCGCCGCTCCATGATTGATGACACCT...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGCAGCGAGTGCATTCCTaGATCCCCAACTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRQRVHS*IPNSMR
Trigger: CCTCATGGAGTTGGGGATCCAGGAATGCACTCGCTG...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp GTGTGTGTGTGTGTGTGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTGGGGGAGATGGCCAGGTTaGCCACCTGCTGGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: VCVCVWSPWVYKKGSPCWGRWPG*PPAGKG
Trigger: ACCTTTCCCAGCAGGTGGCCAACCTGGCCATCTCCC...CCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp GTGTGTGTGTGTGTGTGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTGGTCTTCAACGGTCAGGTaGCACCAGCCAGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: VCVCVWSPWVYKKGSPCWSSTVR*HQPGRR
Trigger: CCTCCTGCCTGGCTGGTGCCACCTGACCGTTGAAGA...CCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp GTGTGTGTGTGTGTGTGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTGGAGCACCGAGGTGTCGTaGCCAGGGGATGTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: VCVCVWSPWVYKKGSPCWSTEVS*PGDVSS
Trigger: GGAACTCACATCCCCTGGCCACGACACCTCGGTGCT...CCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGCAGGTTGCCCTAGGATaGAGGCAGTTCAGACCCTGG +
Preference number: 4 (lower is better)
Translates to: TTVAVECNHWGNMRILGKQVALG*RQFRPW
Trigger: CCAGGGTCTGAACTGCCTCCATCCTAGGGCAACCTG...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp GTGTGTGTGTGTGTGTGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTGGAAAGGTAGTCCCTGCTaGAGCCGCCAGTCGCGTCTC +
Preference number: 4 (lower is better)
Translates to: VCVCVWSPWVYKKGSPCWKGSPC*SRQSRL
Trigger: GAGACGCGACTGGCGGCTCCAGCAGGGACTACCTTT...CCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp GGAGGCAGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAGGATCCCCAACTCCATaGGGGCATAGCAGGCGGTCA +
Preference number: 4 (lower is better)
Translates to: GGSSDPGSLKLIGRTAISGSPTP*GHSRRS
Trigger: TGACCGCCTGCTATGCCCTCATGGAGTTGGGGATCC...TGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACTGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp TATCAATGGCCTAAGCCTGCTGTCTGCCCAAGGGAGCCAAGGGCAAGAGCCAAATGGCTCCTTAAGCAGTaGCTGCTCACAGCGAGTGCA +
Preference number: 4 (lower is better)
Translates to: YQWPKPAVCPREPRARAKWLLKQ*LLTASA
Trigger: TGCACTCGCTGTGAGCAGTCACTGCTTAAGGAGCCA...TTTGGCTCTTGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGGCCATTGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGGCTCCTTAAGCAGTaGCTGCTCACAGCGAGTGCA +
Preference number: 4 (lower is better)
Translates to: TTVAVECNHWGNMRILGKWLLKQ*LLTASA
Trigger: TGCACTCGCTGTGAGCAGTCACTGCTTAAGGAGCCA...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp GTGTGTGTGTGTGTGTGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTGGTTCACGATGGCGCGGTaGTGTCACGGAGAGATCACG +
Preference number: 4 (lower is better)
Translates to: VCVCVWSPWVYKKGSPCWFTMAR*CHGEIT
Trigger: CGTGATCTCTCCGTGACATCACCGCGCCATCGTGAA...CCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373243.7
CDS-3UTR TCA 90 bp ACTTGGCAGCAACCCAGTGACATGGGGGCGGGGGTGCAGTGTTTCATCTGTACTTGTTTCATCTGTACTTaGGAGCACCAGAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: TWQQPSDMGAGVQCFICTCFICT*EHQSPH
Trigger: GTGGGGGCTCTGGTGCTCTCAAGTACAGATGAAACA...AGTACAGATGAAACACTGCACCCCCGCCCCCATGTCACTGGGTTGCTGCCAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR GCA 90 bp TATCAATGGCCTAAGCCTGCTGTCTGCCCAAGGGAGCCAAGGGCAAGAGCCAAAAGCAGGGCTGCAAACTaGTCGCTGTCATTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: YQWPKPAVCPREPRARAKSRAAN*SLSFLA
Trigger: GGCCAAGAATGACAGCGAGCAGTTTGCAGCCCTGCT...TTTGGCTCTTGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGGCCATTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCCCCTCTGGGTGTGCCTaGTACAGCCGTCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: SSDPGSLKLIGRTAISMAPSGCA*YSRQAL
Trigger: CAGTGCCTGACGGCTGTAGCAGGCACACCCAGAGGG...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTAGTGCAGGGTTGCGCTaGCAGGAGCTCAGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: QWSVITGETCGFWGSVPPSAGLR*QELSLL
Trigger: AAGCAAGCTGAGCTCCTGGCAGCGCAACCCTGCACT...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCGGCTGCCAGCTTCAGTaGAGGGTTGCGCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: SSDPGSLKLIGRTAISMAGCQLQ*RVALPG
Trigger: TCCTGGCAGCGCAACCCTGCACTGAAGCTGGCAGCC...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp GGAGGCAGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCACCTCTTTCACCTCCGTaGCCGTCTCCTCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: GGSSDPGSLKLIGRTAISPLSPP*PSPPVP
Trigger: TGGCACTGGAGGAGACGGGCACGGAGGTGAAAGAGG...TGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACTGCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACACTGCTCACAGCGAGTaGATTCCTGGATCCCCAACT +
Preference number: 4 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHTAHSE*IPGSPT
Trigger: AGTTGGGGATCCAGGAATGCACTCGCTGTGAGCAGT...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGACTGCTCACAGCGAGTaGATTCCTGGATCCCCAACT +
Preference number: 4 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRTAHSE*IPGSPT
Trigger: AGTTGGGGATCCAGGAATGCACTCGCTGTGAGCAGT...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGTCCTTAAGCAGTGACTaGTCACAGCGAGTGCATTCC +
Preference number: 4 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQSLSSD*SQRVHS
Trigger: GGAATGCACTCGCTGTGAGCAGTCACTGCTTAAGGA...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGAGCCTTCCCTGTTGCTaGACTAGTGCTGGTAGCGAC +
Preference number: 4 (lower is better)
Translates to: TTVAVECNHWGNMRILGKSLPCC*TSAGSD
Trigger: GTCGCTACCAGCACTAGTGCAGCAACAGGGAAGGCT...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCGGCTCTGACAGGCACTaGTCCAAGGCAGCCATGCGG +
Preference number: 4 (lower is better)
Translates to: SSDPGSLKLIGRTAISMAGSDRH*SKAAMR
Trigger: CCGCATGGCTGCCTTGGAGCAGTGCCTGTCAGAGCC...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCGCTGATAGGAAGAACTaGGATATCAATGGCCTAAGC +
Preference number: 4 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCADRKN*DINGLS
Trigger: GCTTAGGCCATTGATATCGCAGTTCTTCCTATCAGC...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTAAGAAAGGTAGTCCCTaGTGGAGCCGCCAGTCGCGT +
Preference number: 4 (lower is better)
Translates to: QWSVITGETCGFWGSVPPKKGSP*WSRQSR
Trigger: ACGCGACTGGCGGCTCCAGCAGGGACTACCTTTCTT...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CTTGGCAGCAACCCAGTGACATGGGGGCGGGGGTGCAGTGTTTCATCTGTACTTACATGGGGGCGGGGGTaGAGTGTTTCATCTGTACTT +
Preference number: 4 (lower is better)
Translates to: LGSNPVTWGRGCSVSSVLTWGRG*SVSSVL
Trigger: AAGTACAGATGAAACACTGCACCCCCGCCCCCATGT...AAGTACAGATGAAACACTGCACCCCCGCCCCCATGTCACTGGGTTGCTGCCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR CCA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTTGCCTGGTTCAGAGCTaGCTCGCAATCCGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: QWSVITGETCGFWGSVPPCLVQS*LAIRGH
Trigger: ATGGCCTCGGATTGCGAGCCAGCTCTGAACCAGGCA...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTTTCAGGACTTGGGGATaGGCGGCCAGTTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: QWSVITGETCGFWGSVPPFRTWG*AASSGS
Trigger: TGACCCTGAACTGGCCGCCCATCCCCAAGTCCTGAA...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACATCTTGTTCAGGACTTaGGGATGGGCGGCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHILFRT*GWAASS
Trigger: TGAACTGGCCGCCCATCCCCAAGTCCTGAACAAGAT...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp GTGTGTGTGTGTGTGTGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTGGAGGAAGGGCAGCAGCTaGCACACCTCCTTACGCAAG +
Preference number: 4 (lower is better)
Translates to: VCVCVWSPWVYKKGSPCWRKGSS*HTSLRK
Trigger: CTTGCGTAAGGAGGTGTGCCAGCTGCTGCCCTTCCT...CCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTCCTCGTAGAGGGTCTTaGCATAGCGGACGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: QWSVITGETCGFWGSVPPPRRGS*HSGRGR
Trigger: CCTTCCTCGTCCGCTATGCCAAGACCCTCTACGAGG...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp GGAGGCAGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAGCTGGGAAAGGTCATTaGCCTCCTCGGCCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: GGSSDPGSLKLIGRTAISAGKGH*PPRPPR
Trigger: ACGAGGAGGCCGAGGAGGCCAATGACCTTTCCCAGC...TGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACTGCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTTCCCTGAAGAGCTaGAGAGGTGCTAAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: TTVAVECNHWGNMRILGKCSLKS*RGAKEP
Trigger: CGGCTCCTTAGCACCTCTCCAGCTCTTCAGGGAACA...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGAACCCTCGGGATGCTaGTGTTCCCTGAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: QWSVITGETCGFWGSVPPEPSGC*CSLKSW
Trigger: CCAGCTCTTCAGGGAACACCAGCATCCCGAGGGTTC...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCGTGGCCCGCGCCACGTaGGACTGTGATAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SSDPGSLKLIGRTAISMAVARAT*DCDRKR
Trigger: CCTCTTCCTATCACAGTCCCACGTGGCGCGGGCCAC...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCACACTGCCTAGCAGCTaGAGCAGCTCCTGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: SSDPGSLKLIGRTAISMATLPSS*SSSCGQ
Trigger: CTGGCCGCAGGAGCTGCTCCAGCTGCTAGGCAGTGT...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACAGGCAGTTCAGACCCTaGGTCACTGAAGCTGATAGG +
Preference number: 4 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHRQFRP*VTEADR
Trigger: CCTATCAGCTTCAGTGACCCAGGGTCTGAACTGCCT...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGGAAACATGCGGATTCTaGGGAAGTGTCCCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQETCGF*GSVPPV
Trigger: AACAGGAGGGACACTTCCCCAGAATCCGCATGTTTC...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGGATGGTGTCGCGATATaGCGCGATGGAGTCGCGATA +
Preference number: 4 (lower is better)
Translates to: TTVAVECNHWGNMRILGKDGVAI*RDGVAI
Trigger: TATCGCGACTCCATCGCGCCATATCGCGACACCATC...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373243.7
CDS-3UTR TCA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGCTATGTCACCTGCTTTaGCTGCCTTGGTCACTAGCA +
Preference number: 4 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRLCHLL*LPWSLA
Trigger: TGCTAGTGACCAAGGCAGTCAAAGCAGGTGACATAG...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACCTATGTCACCTGCTTTaGCTGCCTTGGTCACTAGCA +
Preference number: 4 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHLCHLL*LPWSLA
Trigger: TGCTAGTGACCAAGGCAGTCAAAGCAGGTGACATAG...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTTGGCTCCTTAAGCAGTaGCTGCTCACAGCGAGTGCA +
Preference number: 4 (lower is better)
Translates to: QWSVITGETCGFWGSVPPWLLKQ*LLTASA
Trigger: TGCACTCGCTGTGAGCAGTCACTGCTTAAGGAGCCA...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACCTGGTAGCGACGTCATaGGGGTGTTCATTAGAGATG +
Preference number: 4 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHLVATS*GCSLEM
Trigger: CATCTCTAATGAACACCCTCATGACGTCGCTACCAG...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGCTGGTAGCGACGTCATaGGGGTGTTCATTAGAGATG +
Preference number: 4 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRLVATS*GCSLEM
Trigger: CATCTCTAATGAACACCCTCATGACGTCGCTACCAG...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGATGCTGGTGTTCCCTaGAGAGCTGGAGAGGTGCTA +
Preference number: 4 (lower is better)
Translates to: QWSVITGETCGFWGSVPPDAGVP*RAGEVL
Trigger: TAGCACCTCTCCAGCTCTTCAGGGAACACCAGCATC...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACGGCATCTATGTCACCTaGTTTGACTGCCTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHGIYVT*FDCLGH
Trigger: GTGACCAAGGCAGTCAAAGCAGGTGACATAGATGCC...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACTCCTTAAGCAGTGACTaGTCACAGCGAGTGCATTCC +
Preference number: 4 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHSLSSD*SQRVHS
Trigger: GGAATGCACTCGCTGTGAGCAGTCACTGCTTAAGGA...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp GGAGGCAGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAGCTGCAGGAAATACTTaGACAGAAGCGAGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: GGSSDPGSLKLIGRTAISAAGNT*TEARGP
Trigger: GGGCCCCCTCGCTTCTGTGCAAGTATTTCCTGCAGC...TGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACTGCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp GTGTGTGTGTGTGTGTGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTGGAGCAGCCTTCCCTGTTaGTGCACTAGTGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: VCVCVWSPWVYKKGSPCWSSLPC*CTSAGS
Trigger: GCTACCAGCACTAGTGCAGCAACAGGGAAGGCTGCT...CCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp GGAGGCAGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAGAAGAGGATGGCAGCTaGGAAGAACCCTCGGGATGC +
Preference number: 4 (lower is better)
Translates to: GGSSDPGSLKLIGRTAISEEDGS*EEPSGC
Trigger: GCATCCCGAGGGTTCTTCGCAGCTGCCATCCTCTTC...TGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACTGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCCCTAAGCCTGCTGTCTaGCCAAGGGAGCCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: SSDPGSLKLIGRTAISMAPKPAV*PREPRA
Trigger: TGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGG...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp GGAGGCAGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCACTGTCTGCCCCAGGTTaGCCTAGGATGGAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: GGSSDPGSLKLIGRTAISLSAPG*PRMEAV
Trigger: AACTGCCTCCATCCTAGGGCAACCTGGGGCAGACAG...TGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACTGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGATCACTGGGGAAACATaGGGATTCTGGGGAAGTGTC +
Preference number: 4 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRITGET*GFWGSV
Trigger: GACACTTCCCCAGAATCCGCATGTTTCCCCAGTGAT...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCGCTCGCTGTCATTCTTaGCCTCACGGAGGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: SSDPGSLKLIGRTAISMAARCHS*PHGGLP
Trigger: TGGGAGCCCTCCGTGAGGCCAAGAATGACAGCGAGC...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCCATCCGGCGCCTCCTTaGTGGTCAGGAGACGATTGG +
Preference number: 4 (lower is better)
Translates to: SSDPGSLKLIGRTAISMAHPAPP*WSGDDW
Trigger: CCAATCGTCTCCTGACCACCAAGGAGGCGCCGGATG...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp GGAGGCAGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCATTCAGGACTTGGGGATaGGCGGCCAGTTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: GGSSDPGSLKLIGRTAISFRTWG*AASSGS
Trigger: TGACCCTGAACTGGCCGCCCATCCCCAAGTCCTGAA...TGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACTGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCTGCCCCAGGTATGCCTaGCATAGGGCAGACACGGTG +
Preference number: 4 (lower is better)
Translates to: SSDPGSLKLIGRTAISMACPRYA*HRADTV
Trigger: CACCGTGTCTGCCCTATGCCAGGCATACCTGGGGCA...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp GTGTGTGTGTGTGTGTGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTGGCAGCGAGTGCATTCCTaGATCCCCAACTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: VCVCVWSPWVYKKGSPCWQRVHS*IPNSMR
Trigger: CCTCATGGAGTTGGGGATCCAGGAATGCACTCGCTG...CCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp GGAGGCAGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCACCTCGTAGAGGGTCTTaGCATAGCGGACGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: GGSSDPGSLKLIGRTAISPRRGS*HSGRGR
Trigger: CCTTCCTCGTCCGCTATGCCAAGACCCTCTACGAGG...TGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACTGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp AAAGTTGCTTTGTCTGTAAAATCAGAACCCTTCAGAGGATTCTTGGAAGGGCTGCCGGAGAGCGTCTCCTaGCCAGGTGGGCCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: KVALSVKSEPFRGFLEGLPESVS*PGGPWG
Trigger: ACCCCAGGGCCCACCTGGCCAGGAGACGCTCTCCGG...CAGCCCTTCCAAGAATCCTCTGAAGGGTTCTGATTTTACAGACAAAGCAACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR CCA 90 bp TATCAATGGCCTAAGCCTGCTGTCTGCCCAAGGGAGCCAAGGGCAAGAGCCAAAGTGATAGGAAGAGGATaGCAGCTGCGAAGAACCCTC +
Preference number: 4 (lower is better)
Translates to: YQWPKPAVCPREPRARAKVIGRG*QLRRTL
Trigger: GAGGGTTCTTCGCAGCTGCCATCCTCTTCCTATCAC...TTTGGCTCTTGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGGCCATTGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGGAACTGCGATATCAATaGCCTAAGCCTGCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRELRYQ*PKPAVC
Trigger: GCAGACAGCAGGCTTAGGCCATTGATATCGCAGTTC...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGAGGCAGTTCAGACCCTaGGTCACTGAAGCTGATAGG +
Preference number: 4 (lower is better)
Translates to: TTVAVECNHWGNMRILGKRQFRP*VTEADR
Trigger: CCTATCAGCTTCAGTGACCCAGGGTCTGAACTGCCT...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp GTGTGTGTGTGTGTGTGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTGGTCAAGCAAGCTCAGGTaGAAGGAGGTTTCCCCACCC +
Preference number: 4 (lower is better)
Translates to: VCVCVWSPWVYKKGSPCWSSKLR*KEVSPP
Trigger: GGGTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGA...CCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTTCAAGCAAGCTCAGGTaGAAGGAGGTTTCCCCACCC +
Preference number: 4 (lower is better)
Translates to: QWSVITGETCGFWGSVPPSSKLR*KEVSPP
Trigger: GGGTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGA...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTAGCCAGGCACCACGGTaGCAGTGGAGTGTAATCACT +
Preference number: 4 (lower is better)
Translates to: QWSVITGETCGFWGSVPPSQAPR*QWSVIT
Trigger: AGTGATTACACTCCACTGCCACCGTGGTGCCTGGCT...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCAAAGGTAGTCCCTGCTaGAGCCGCCAGTCGCGTCTC +
Preference number: 4 (lower is better)
Translates to: SSDPGSLKLIGRTAISMAKGSPC*SRQSRL
Trigger: GAGACGCGACTGGCGGCTCCAGCAGGGACTACCTTT...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGGTGTGTGTGTGTGTGTaGTCCCCCTGGGTTTATAAG +
Preference number: 4 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRVCVCV*SPWVYK
Trigger: CTTATAAACCCAGGGGGACCACACACACACACACAC...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp TATCAATGGCCTAAGCCTGCTGTCTGCCCAAGGGAGCCAAGGGCAAGAGCCAAAAGGGCTGTGACAAAATaGAGTCTCGACAGGGCACGA +
Preference number: 4 (lower is better)
Translates to: YQWPKPAVCPREPRARAKRAVTK*SLDRAR
Trigger: TCGTGCCCTGTCGAGACTCCATTTTGTCACAGCCCT...TTTGGCTCTTGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGGCCATTGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373243.7
CDS-3UTR CCA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGGTCAAAATCACGACATaGGAGACAGCCCCCAAAGAT +
Preference number: 4 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQVKITT*ETAPKD
Trigger: ATCTTTGGGGGCTGTCTCCCATGTCGTGATTTTGAC...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000373243.7
CDS-3UTR CCA 90 bp GTGTGTGTGTGTGTGTGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTGGGATCACACTTCACGATaGCGCGGTGATGTCACGGAG +
Preference number: 4 (lower is better)
Translates to: VCVCVWSPWVYKKGSPCWDHTSR*RGDVTE
Trigger: CTCCGTGACATCACCGCGCCATCGTGAAGTGTGATC...CCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373243.7
CDS-3UTR TCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCCTATGGCCTCCTTCATaGCGCTCACGAGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: SSDPGSLKLIGRTAISMALWPPS*RSRAAP
Trigger: AGGTGCAGCTCGTGAGCGTCATGAAGGAGGCCATAG...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCACGACAGGGCGGCGATaGGATCACACTTCACGATGG +
Preference number: 4 (lower is better)
Translates to: SSDPGSLKLIGRTAISMATTGRR*DHTSRW
Trigger: CCATCGTGAAGTGTGATCTCATCGCCGCCCTGTCGT...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373243.7
CDS-3UTR GCA 90 bp TATCAATGGCCTAAGCCTGCTGTCTGCCCAAGGGAGCCAAGGGCAAGAGCCAAAGGCATCTATGTCACCTaGTTTGACTGCCTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: YQWPKPAVCPREPRARAKGIYVT*FDCLGH
Trigger: GTGACCAAGGCAGTCAAAGCAGGTGACATAGATGCC...TTTGGCTCTTGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGGCCATTGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp TATCAATGGCCTAAGCCTGCTGTCTGCCCAAGGGAGCCAAGGGCAAGAGCCAAATCCTTAAGCAGTGACTaGTCACAGCGAGTGCATTCC +
Preference number: 4 (lower is better)
Translates to: YQWPKPAVCPREPRARAKSLSSD*SQRVHS
Trigger: GGAATGCACTCGCTGTGAGCAGTCACTGCTTAAGGA...TTTGGCTCTTGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGGCCATTGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGGTGAGTTCCCACTGCTaGAGGAAATACTTGCACAGA +
Preference number: 4 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRVSSHC*RKYLHR
Trigger: TCTGTGCAAGTATTTCCTGCAGCAGTGGGAACTCAC...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp GGAGGCAGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAGAAGAACCCTCGGGATaGTGGTGTTCCCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: GGSSDPGSLKLIGRTAISEEPSG*WCSLKS
Trigger: GCTCTTCAGGGAACACCAGCATCCCGAGGGTTCTTC...TGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACTGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCGAAGAGGATGGCAGCTaGGAAGAACCCTCGGGATGC +
Preference number: 4 (lower is better)
Translates to: SSDPGSLKLIGRTAISMAEEDGS*EEPSGC
Trigger: GCATCCCGAGGGTTCTTCGCAGCTGCCATCCTCTTC...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCCTGTCTGCCCCAGGTTaGCCTAGGATGGAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: SSDPGSLKLIGRTAISMALSAPG*PRMEAV
Trigger: AACTGCCTCCATCCTAGGGCAACCTGGGGCAGACAG...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp TATCAATGGCCTAAGCCTGCTGTCTGCCCAAGGGAGCCAAGGGCAAGAGCCAAAAGATTCCTTCGCTTGTaGGTAGTTTTACCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: YQWPKPAVCPREPRARAKRFLRL*VVLPAQ
Trigger: CTGGGCGGGTAAAACTACGCACAAGCGAAGGAATCT...TTTGGCTCTTGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGGCCATTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS-3UTR CCA 90 bp GTGTGTGTGTGTGTGTGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTGGTCCGCCGCCGAGTTTTaGCATCTATGTCACCTGCTT +
Preference number: 4 (lower is better)
Translates to: VCVCVWSPWVYKKGSPCWSAAEF*HLCHLL
Trigger: AAGCAGGTGACATAGATGCCAAAACTCGGCGGCGGA...CCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTATCTTGTTCAGGACTTaGGGATGGGCGGCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: QWSVITGETCGFWGSVPPILFRT*GWAASS
Trigger: TGAACTGGCCGCCCATCCCCAAGTCCTGAACAAGAT...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGCATCCTCAGCTTTCTaGAAATCCTCACTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: QWSVITGETCGFWGSVPPASSAF*KSSLRP
Trigger: GGGCCTCAGTGAGGATTTCCAGAAAGCTGAGGATGC...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACAGAGCTCAAACTTGCTaGCATCCTCAGCTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHRAQTC*HPQLSG
Trigger: TCCAGAAAGCTGAGGATGCCAGCAAGTTTGAGCTCT...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp GGAGGCAGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCACAGCGAGTGCATTCCTaGATCCCCAACTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: GGSSDPGSLKLIGRTAISQRVHS*IPNSMR
Trigger: CCTCATGGAGTTGGGGATCCAGGAATGCACTCGCTG...TGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACTGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CACATCAACATGAGTTTGGCAATCTGCTGTACAAGTGAAAGATGTGGGCTGGGGGCTGGGAAAGGTCATTaGCCTCCTCGGCCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: HINMSLAICCTSERCGLGAGKGH*PPRPPR
Trigger: ACGAGGAGGCCGAGGAGGCCAATGACCTTTCCCAGC...CCCCAGCCCACATCTTTCACTTGTACAGCAGATTGCCAAACTCATGTTGATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR CCA 90 bp AGGATTCCTGACTTCTTTAAAAATGGGAGGATATGGCAGGGCCACTTGGCAGCAAGCACCGAGGTGTCGTaGCCAGGGGATGTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: RIPDFFKNGRIWQGHLAASTEVS*PGDVSS
Trigger: GGAACTCACATCCCCTGGCCACGACACCTCGGTGCT...TGCTGCCAAGTGGCCCTGCCATATCCTCCCATTTTTAAAGAAGTCAGGAATCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR CCA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGGAACTGCGATATCAATaGCCTAAGCCTGCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: TTVAVECNHWGNMRILGKELRYQ*PKPAVC
Trigger: GCAGACAGCAGGCTTAGGCCATTGATATCGCAGTTC...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCCCGCCATCTTGCTTGTaGGTATTGCCCGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: SSDPGSLKLIGRTAISMAPPSCL*VLPESG
Trigger: CCCAGACTCGGGCAATACCCACAAGCAAGATGGCGG...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373253.7
3UTR CAA 72 bp AGAGCCCCCACAAGGCCTGGCCACATCAACATGAGTTaGGCAATCTGCTGTACAAGTGAAAGATGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RAPTRPGHINMS*AICCTSERCGL
Trigger: CAGCCCACATCTTTCACTTGTACAGCAGATTGCCAAACTCATGTTGATGTGGCCAGGCCTTGTGGGGGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR TCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCGACGATTGGGGAAGGTaGAGCCGACAGCATCGAAGA +
Preference number: 4 (lower is better)
Translates to: SSDPGSLKLIGRTAISMADDWGR*SRQHRR
Trigger: TCTTCGATGCTGTCGGCTTCACCTTCCCCAATCGTC...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp TATCAATGGCCTAAGCCTGCTGTCTGCCCAAGGGAGCCAAGGGCAAGAGCCAAAACATGTGCACAGCTTTaGACTTGGCGATCACAGAAC +
Preference number: 4 (lower is better)
Translates to: YQWPKPAVCPREPRARAKTCAQL*TWRSQN
Trigger: GTTCTGTGATCGCCAAGTTCAAAGCTGTGCACATGT...TTTGGCTCTTGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGGCCATTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGACATGTGCACAGCTTTaGACTTGGCGATCACAGAAC +
Preference number: 4 (lower is better)
Translates to: TTVAVECNHWGNMRILGKTCAQL*TWRSQN
Trigger: GTTCTGTGATCGCCAAGTTCAAAGCTGTGCACATGT...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGGCAGAGCTCAAACTTaGTGGCATCCTCAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: QWSVITGETCGFWGSVPPGRAQT*WHPQLS
Trigger: AGAAAGCTGAGGATGCCAGCAAGTTTGAGCTCTGCC...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGGTGAGTTCCCACTGCTaGAGGAAATACTTGCACAGA +
Preference number: 4 (lower is better)
Translates to: TTVAVECNHWGNMRILGKVSSHC*RKYLHR
Trigger: TCTGTGCAAGTATTTCCTGCAGCAGTGGGAACTCAC...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCAGCCTTCCCTGTTGCTaGACTAGTGCTGGTAGCGAC +
Preference number: 4 (lower is better)
Translates to: SSDPGSLKLIGRTAISMASLPCC*TSAGSD
Trigger: GTCGCTACCAGCACTAGTGCAGCAACAGGGAAGGCT...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp TATCAATGGCCTAAGCCTGCTGTCTGCCCAAGGGAGCCAAGGGCAAGAGCCAAACCATCGTCACTCTGCTaGAACACGACACAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: YQWPKPAVCPREPRARAKPSSLC*NTTQRF
Trigger: AAACCTTTGTGTCGTGTTGCAGCAGAGTGACGATGG...TTTGGCTCTTGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGGCCATTGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp TATCAATGGCCTAAGCCTGCTGTCTGCCCAAGGGAGCCAAGGGCAAGAGCCAAATTGAGTGTCCACATGTaGACAGCTTTGAACTTGGCG +
Preference number: 4 (lower is better)
Translates to: YQWPKPAVCPREPRARAKLSVHM*TALNLA
Trigger: CGCCAAGTTCAAAGCTGTGCACATGTGGACACTCAA...TTTGGCTCTTGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGGCCATTGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCTGTTCCCTGAAGAGCTaGAGAGGTGCTAAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: SSDPGSLKLIGRTAISMACSLKS*RGAKEP
Trigger: CGGCTCCTTAGCACCTCTCCAGCTCTTCAGGGAACA...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCTCAAGCAAGCTCAGGTaGAAGGAGGTTTCCCCACCC +
Preference number: 4 (lower is better)
Translates to: SSDPGSLKLIGRTAISMASSKLR*KEVSPP
Trigger: GGGTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGA...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGAAACATGCGGATTCTaGGGAAGTGTCCCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: QWSVITGETCGFWGSVPPETCGF*GSVPPV
Trigger: AACAGGAGGGACACTTCCCCAGAATCCGCATGTTTC...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGGTGGAGTGTAATCACTaGGGAAACATGCGGATTCTG +
Preference number: 4 (lower is better)
Translates to: TTVAVECNHWGNMRILGKVECNH*GNMRIL
Trigger: CAGAATCCGCATGTTTCCCCAGTGATTACACTCCAC...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp TATCAATGGCCTAAGCCTGCTGTCTGCCCAAGGGAGCCAAGGGCAAGAGCCAAAGTGGAGTGTAATCACTaGGGAAACATGCGGATTCTG +
Preference number: 4 (lower is better)
Translates to: YQWPKPAVCPREPRARAKVECNH*GNMRIL
Trigger: CAGAATCCGCATGTTTCCCCAGTGATTACACTCCAC...TTTGGCTCTTGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGGCCATTGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp GTGTGTGTGTGTGTGTGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTGGGTGTGTGTGTGTGTGTaGTCCCCCTGGGTTTATAAG +
Preference number: 4 (lower is better)
Translates to: VCVCVWSPWVYKKGSPCWVCVCV*SPWVYK
Trigger: CTTATAAACCCAGGGGGACCACACACACACACACAC...CCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp GGCAACACCTTGAGCCAATCACTTATCCATGCCAAAGTTGCTTTGTCTGTAAAAGGCTGGGGAGTCGGATaGCCTGTGTGGAGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: GNTLSQSLIHAKVALSVKGWGVG*PVWSPG
Trigger: GCCAGGACTCCACACAGGCCATCCGACTCCCCAGCC...TTTTACAGACAAAGCAACTTTGGCATGGATAAGTGATTGGCTCAAGGTGTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR TCA 90 bp GGCAACACCTTGAGCCAATCACTTATCCATGCCAAAGTTGCTTTGTCTGTAAAACGTGGCCAGGGGATGTaGGTTCCCACTGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: GNTLSQSLIHAKVALSVKRGQGM*VPTAAG
Trigger: TCCTGCAGCAGTGGGAACTCACATCCCCTGGCCACG...TTTTACAGACAAAGCAACTTTGGCATGGATAAGTGATTGGCTCAAGGTGTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR TCA 90 bp GGAGGCAGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCACTGGTAGCGACGTCATaGGGGTGTTCATTAGAGATG +
Preference number: 4 (lower is better)
Translates to: GGSSDPGSLKLIGRTAISLVATS*GCSLEM
Trigger: CATCTCTAATGAACACCCTCATGACGTCGCTACCAG...TGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACTGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR TCA 90 bp GTGTGTGTGTGTGTGTGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTGGACATGTGCACAGCTTTaGACTTGGCGATCACAGAAC +
Preference number: 4 (lower is better)
Translates to: VCVCVWSPWVYKKGSPCWTCAQL*TWRSQN
Trigger: GTTCTGTGATCGCCAAGTTCAAAGCTGTGCACATGT...CCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp GGAGGCAGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAGGCATCTATGTCACCTaGTTTGACTGCCTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: GGSSDPGSLKLIGRTAISGIYVT*FDCLGH
Trigger: GTGACCAAGGCAGTCAAAGCAGGTGACATAGATGCC...TGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACTGCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp GGAGGCAGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAGGCAGAGCTCAAACTTaGTGGCATCCTCAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: GGSSDPGSLKLIGRTAISGRAQT*WHPQLS
Trigger: AGAAAGCTGAGGATGCCAGCAAGTTTGAGCTCTGCC...TGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACTGCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCACTGCTCACAGCGAGTaGATTCCTGGATCCCCAACT +
Preference number: 4 (lower is better)
Translates to: SSDPGSLKLIGRTAISMATAHSE*IPGSPT
Trigger: AGTTGGGGATCCAGGAATGCACTCGCTGTGAGCAGT...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp TATCAATGGCCTAAGCCTGCTGTCTGCCCAAGGGAGCCAAGGGCAAGAGCCAAAGCTGATAGGAAGAACTaGGATATCAATGGCCTAAGC +
Preference number: 4 (lower is better)
Translates to: YQWPKPAVCPREPRARAKADRKN*DINGLS
Trigger: GCTTAGGCCATTGATATCGCAGTTCTTCCTATCAGC...TTTGGCTCTTGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGGCCATTGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp GGAGGCAGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATCACTGGGGAAACATaGGGATTCTGGGGAAGTGTC +
Preference number: 4 (lower is better)
Translates to: GGSSDPGSLKLIGRTAISITGET*GFWGSV
Trigger: GACACTTCCCCAGAATCCGCATGTTTCCCCAGTGAT...TGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACTGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp GTGTGTGTGTGTGTGTGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTGGTTGAGTGTCCACATGTaGACAGCTTTGAACTTGGCG +
Preference number: 4 (lower is better)
Translates to: VCVCVWSPWVYKKGSPCWLSVHM*TALNLA
Trigger: CGCCAAGTTCAAAGCTGTGCACATGTGGACACTCAA...CCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp GGGCCACTTGGCAGCAACCCAGTGACATGGGGGCGGGGGTGCAGTGTTTCATCTTATCCATGCCAAAGTTaGTTTGTCTGTAAAATCAGA +
Preference number: 4 (lower is better)
Translates to: GPLGSNPVTWGRGCSVSSYPCQS*FVCKIR
Trigger: TCTGATTTTACAGACAAAGCAACTTTGGCATGGATA...AGATGAAACACTGCACCCCCGCCCCCATGTCACTGGGTTGCTGCCAAGTGGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR CCA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTAGAGCTCAAACTTGCTaGCATCCTCAGCTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: QWSVITGETCGFWGSVPPRAQTC*HPQLSG
Trigger: TCCAGAAAGCTGAGGATGCCAGCAAGTTTGAGCTCT...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCGTGATAGGAAGAGGATaGCAGCTGCGAAGAACCCTC +
Preference number: 4 (lower is better)
Translates to: SSDPGSLKLIGRTAISMAVIGRG*QLRRTL
Trigger: GAGGGTTCTTCGCAGCTGCCATCCTCTTCCTATCAC...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGAAAGGTTTAAAGATCTaGGCCCAAAGACTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: TTVAVECNHWGNMRILGKKGLKI*AQRLWV
Trigger: GACCCAGAGTCTTTGGGCCCAGATCTTTAAACCTTT...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CCCACAAGGCCTGGCCACATCAACATGAGTTTGGCAATCTGCTGTACAAGTGAAAGCCCCCACAAGGCCTaGCCACATCAACATGAGTTT +
Preference number: 4 (lower is better)
Translates to: PTRPGHINMSLAICCTSESPHKA*PHQHEF
Trigger: AAACTCATGTTGATGTGGCCAGGCCTTGTGGGGGCT...TTCACTTGTACAGCAGATTGCCAAACTCATGTTGATGTGGCCAGGCCTTGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR CCA 90 bp CGGCAACACCTTGAGCCAATCACTTATCCATGCCAAAGTTGCTTTGTCTGTAAAAGCAACCCAGTGACATaGGGGCGGGGGTGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: RQHLEPITYPCQSCFVCKSNPVT*GRGCSV
Trigger: AACACTGCACCCCCGCCCCCATGTCACTGGGTTGCT...TTTACAGACAAAGCAACTTTGGCATGGATAAGTGATTGGCTCAAGGTGTTGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR GCA 90 bp GTGTGTGTGTGTGTGTGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTGGGCTGATAGGAAGAACTaGGATATCAATGGCCTAAGC +
Preference number: 4 (lower is better)
Translates to: VCVCVWSPWVYKKGSPCWADRKN*DINGLS
Trigger: GCTTAGGCCATTGATATCGCAGTTCTTCCTATCAGC...CCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp GGAGGCAGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCACCATCGTCACTCTGCTaGAACACGACACAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: GGSSDPGSLKLIGRTAISPSSLC*NTTQRF
Trigger: AAACCTTTGTGTCGTGTTGCAGCAGAGTGACGATGG...TGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACTGCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCATCACTGGGGAAACATaGGGATTCTGGGGAAGTGTC +
Preference number: 4 (lower is better)
Translates to: SSDPGSLKLIGRTAISMAITGET*GFWGSV
Trigger: GACACTTCCCCAGAATCCGCATGTTTCCCCAGTGAT...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCGAAACATGCGGATTCTaGGGAAGTGTCCCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: SSDPGSLKLIGRTAISMAETCGF*GSVPPV
Trigger: AACAGGAGGGACACTTCCCCAGAATCCGCATGTTTC...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR GCA 90 bp AAAGTTGCTTTGTCTGTAAAATCAGAACCCTTCAGAGGATTCTTGGAAGGGCTGGCTGCAGGAAATACTTaGACAGAAGCGAGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: KVALSVKSEPFRGFLEGLAAGNT*TEARGP
Trigger: GGGCCCCCTCGCTTCTGTGCAAGTATTTCCTGCAGC...CAGCCCTTCCAAGAATCCTCTGAAGGGTTCTGATTTTACAGACAAAGCAACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR GCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCTTGAGTGTCCACATGTaGACAGCTTTGAACTTGGCG +
Preference number: 4 (lower is better)
Translates to: SSDPGSLKLIGRTAISMALSVHM*TALNLA
Trigger: CGCCAAGTTCAAAGCTGTGCACATGTGGACACTCAA...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp CAAAGTTGCTTTGTCTGTAAAATCAGAACCCTTCAGAGGATTCTTGGAAGGGCTAGGAAGGGCAGCAGCTaGCACACCTCCTTACGCAAG +
Preference number: 4 (lower is better)
Translates to: QSCFVCKIRTLQRILGRARKGSS*HTSLRK
Trigger: CTTGCGTAAGGAGGTGTGCCAGCTGCTGCCCTTCCT...AGCCCTTCCAAGAATCCTCTGAAGGGTTCTGATTTTACAGACAAAGCAACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR CCA 90 bp GGCAACACCTTGAGCCAATCACTTATCCATGCCAAAGTTGCTTTGTCTGTAAAAAGGTTGGCCACCTGCTaGGAAAGGTCATTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GNTLSQSLIHAKVALSVKRLATC*ERSLAS
Trigger: GGAGGCCAATGACCTTTCCCAGCAGGTGGCCAACCT...TTTTACAGACAAAGCAACTTTGGCATGGATAAGTGATTGGCTCAAGGTGTTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR CCA 90 bp GGAGGCAGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAAAAGGTTTAAAGATCTaGGCCCAAAGACTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: GGSSDPGSLKLIGRTAISKGLKI*AQRLWV
Trigger: GACCCAGAGTCTTTGGGCCCAGATCTTTAAACCTTT...TGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACTGCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp GGCAACACCTTGAGCCAATCACTTATCCATGCCAAAGTTGCTTTGTCTGTAAAAGTGAAAGATGTGGGCTaGGGAGTCGGATGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: GNTLSQSLIHAKVALSVKVKDVG*GVGWPV
Trigger: CACAGGCCATCCGACTCCCCAGCCCACATCTTTCAC...TTTTACAGACAAAGCAACTTTGGCATGGATAAGTGATTGGCTCAAGGTGTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR GCA 90 bp CAAAGTTGCTTTGTCTGTAAAATCAGAACCCTTCAGAGGATTCTTGGAAGGGCTAGCAGCCTTCCCTGTTaGTGCACTAGTGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: QSCFVCKIRTLQRILGRASSLPC*CTSAGS
Trigger: GCTACCAGCACTAGTGCAGCAACAGGGAAGGCTGCT...AGCCCTTCCAAGAATCCTCTGAAGGGTTCTGATTTTACAGACAAAGCAACTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR CCA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCTGTGTGTGGTCCCCCTaGGTTTATAAGAAAGGTAGT +
Preference number: 4 (lower is better)
Translates to: SSDPGSLKLIGRTAISMACVWSP*VYKKGS
Trigger: ACTACCTTTCTTATAAACCCAGGGGGACCACACACA...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CCA 90 bp GGCAACACCTTGAGCCAATCACTTATCCATGCCAAAGTTGCTTTGTCTGTAAAATATGGCAGGGCCACTTaGCAGCAACCCAGTGACATG +
Preference number: 4 (lower is better)
Translates to: GNTLSQSLIHAKVALSVKYGRAT*QQPSDM
Trigger: CATGTCACTGGGTTGCTGCCAAGTGGCCCTGCCATA...TTTTACAGACAAAGCAACTTTGGCATGGATAAGTGATTGGCTCAAGGTGTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR TCA 90 bp GGCAACACCTTGAGCCAATCACTTATCCATGCCAAAGTTGCTTTGTCTGTAAAACTGGTAGCGACGTCATaGGGGTGTTCATTAGAGATG +
Preference number: 4 (lower is better)
Translates to: GNTLSQSLIHAKVALSVKLVATS*GCSLEM
Trigger: CATCTCTAATGAACACCCTCATGACGTCGCTACCAG...TTTTACAGACAAAGCAACTTTGGCATGGATAAGTGATTGGCTCAAGGTGTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR GCA 90 bp CCCACAAGGCCTGGCCACATCAACATGAGTTTGGCAATCTGCTGTACAAGTGAAATGAGTTTGGCAATCTaGTGTACAAGTGAAAGATGT +
Preference number: 4 (lower is better)
Translates to: PTRPGHINMSLAICCTSEMSLAI*CTSERC
Trigger: ACATCTTTCACTTGTACAGCAGATTGCCAAACTCAT...TTCACTTGTACAGCAGATTGCCAAACTCATGTTGATGTGGCCAGGCCTTGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR CCA 90 bp AAAGTTGGGTTTCACATACAAATTAGGATTCCTGACTTCTTTAAAAATGGGAGGCCTCGTAGAGGGTCTTaGCATAGCGGACGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: KVGFHIQIRIPDFFKNGRPRRGS*HSGRGR
Trigger: CCTTCCTCGTCCGCTATGCCAAGACCCTCTACGAGG...CCTCCCATTTTTAAAGAAGTCAGGAATCCTAATTTGTATGTGAAACCCAACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR GCA 90 bp AAAGTTGGGTTTCACATACAAATTAGGATTCCTGACTTCTTTAAAAATGGGAGGGTGAGTTCCCACTGCTaGAGGAAATACTTGCACAGA +
Preference number: 4 (lower is better)
Translates to: KVGFHIQIRIPDFFKNGRVSSHC*RKYLHR
Trigger: TCTGTGCAAGTATTTCCTGCAGCAGTGGGAACTCAC...CCTCCCATTTTTAAAGAAGTCAGGAATCCTAATTTGTATGTGAAACCCAACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR GCA 90 bp AACACCTTGAGCCAATCACTTATCCATGCCAAAGTTGCTTTGTCTGTAAAATCACCAATCACTTATCCATaGCAAAGTTGCTTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: NTLSQSLIHAKVALSVKSPITYP*QSCFVC
Trigger: ACAGACAAAGCAACTTTGGCATGGATAAGTGATTGG...TGATTTTACAGACAAAGCAACTTTGGCATGGATAAGTGATTGGCTCAAGGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS GCA 90 bp CACACAGGCTGCGGCCCCGAGCGGCGAAGTCTTCTCCCAGCGCGATaGTCCGGGAGCCTCGGGCCGCTGCTCACGCCGCGTTGCCCACTC +
Preference number: 5 (lower is better)
Translates to: HTGCGPERRSLLPAR*SGSLGPLLTPRCPL
Trigger: GAGTGGGCAACGCGGCGTGAGCAGCGGCCCGAGGCTCCCGGAGCATCGCGCTGGGAGAAGACTTCGCCGCTCGGGGCCGCAGCCTGTGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356090.8
CDS GCA 90 bp GCTCCCGGAGCTGCCCGCCGGGATCCAGTCGGAGCCGCAGGCGTGTaGCAGGCGGGCTGCCAGCTTCAGTGCAGGGTTGCGCTGCCAGGA +
Preference number: 5 (lower is better)
Translates to: APGAARRDPVGAAGV*QAGCQLQCRVALPG
Trigger: TCCTGGCAGCGCAACCCTGCACTGAAGCTGGCAGCCCGCCTGGCACACGCCTGCGGCTCCGACTGGATCCCGGCGGGCAGCTCCGGGAGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS GCA 90 bp GGGCCGCTGCTCACGCCGCGTTGCCCACTCCTGGCTCCAGGCTGCTaGAGCTCCACCCCCACCCCCGCACCGCTCTTGACGAATCCGCGG +
Preference number: 5 (lower is better)
Translates to: GPLLTPRCPLLAPGC*SSTPTPAPLLTNPR
Trigger: CCGCGGATTCGTCAAGAGCGGTGCGGGGGTGGGGGTGGAGCTGCAGCAGCCTGGAGCCAGGAGTGGGCAACGCGGCGTGAGCAGCGGCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS GCA 90 bp CCAACAGGCTGCGGCCCCGAGCGGCGAAGTCTTCTCCCAGCGCGATaGTCCGGGAGCCTCGGGCCGCTGCTCACGCCGCGTTGCCCACTC +
Preference number: 5 (lower is better)
Translates to: PTGCGPERRSLLPAR*SGSLGPLLTPRCPL
Trigger: GAGTGGGCAACGCGGCGTGAGCAGCGGCCCGAGGCTCCCGGAGCATCGCGCTGGGAGAAGACTTCGCCGCTCGGGGCCGCAGCCTGTTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS CCA 90 bp CCATGCGGTAGTGGCTGGCCGTCTCCTCGCCCGCCTGCAGCCTCATaGCCTCCCGGCACAGCCGGTTGGCCCGCGCCAGCTCCACCAGGA +
Preference number: 5 (lower is better)
Translates to: PCGSGWPSPRPPAAS*PPGTAGWPAPAPPG
Trigger: TCCTGGTGGAGCTGGCGCGGGCCAACCGGCTGTGCCGGGAGGCCATGAGGCTGCAGGCGGGCGAGGAGACGGCCAGCCACTACCGCATGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS GCA 90 bp GGCGAAGTCTTCTCCCAGCGCGATGCTCCGGGAGCCTCGGGCCGCTaGTCACGCCGCGTTGCCCACTCCTGGCTCCAGGCTGCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: GEVFSQRDAPGASGR*SRRVAHSWLQAAAA
Trigger: AGCTGCAGCAGCCTGGAGCCAGGAGTGGGCAACGCGGCGTGAGCAGCGGCCCGAGGCTCCCGGAGCATCGCGCTGGGAGAAGACTTCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS-3UTR CAA 90 bp TTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCCCCTCCCGGCACAGCCGGTaGGCCCGCGCCAGCTCCACC +
Preference number: 5 (lower is better)
Translates to: FPGLAGTTTLISKPIPAPSRHSR*ARASST
Trigger: GGTGGAGCTGGCGCGGGCCAACCGGCTGTGCCGGGA...GGGGGCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS GCA 90 bp CAGGCGTGTGCCAGGCGGGCTGCCAGCTTCAGTGCAGGGTTGCGCTaGCAGGAGCTCAGCTTGCTTCCCAGGATGCGTGCCAGCCCGGCC +
Preference number: 5 (lower is better)
Translates to: QACARRAASFSAGLR*QELSLLPRMRASPA
Trigger: GGCCGGGCTGGCACGCATCCTGGGAAGCAAGCTGAGCTCCTGGCAGCGCAACCCTGCACTGAAGCTGGCAGCCCGCCTGGCACACGCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS GCA 90 bp GCCGCACTTCCACGCACGCCAGATTCACCAGCAGGGCCAGGAACTTaGTCCCGGAGCTGCCCGCCGGGATCCAGTCGGAGCCGCAGGCGT +
Preference number: 5 (lower is better)
Translates to: AALPRTPDSPAGPGT*SRSCPPGSSRSRRR
Trigger: ACGCCTGCGGCTCCGACTGGATCCCGGCGGGCAGCTCCGGGAGCAAGTTCCTGGCCCTGCTGGTGAATCTGGCGTGCGTGGAAGTGCGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS GCA 90 bp GCAGCAGCAGCAGCAGCGGCGGCGGCAGCAGCAGAATTAACCCCTTaGGCTCCCTCTTCTCGCCCTCCCCGTCCCGCTACCAGCCTGTGG +
Preference number: 5 (lower is better)
Translates to: AAAAAAAAAAAELTP*APSSRPPRPATSLW
Trigger: CCACAGGCTGGTAGCGGGACGGGGAGGGCGAGAAGAGGGAGCGCAAGGGGTTAATTCTGCTGCTGCCGCCGCCGCTGCTGCTGCTGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459931.1
CDS CCA 90 bp GGAGGAGCCGGAGAGCGTCTCCTGGCCAGGTGGGCCCTGGGGTGGTaGGGGAGATGGCCAGGTTGGCCACCTGCTGGGAAAGGTCATTGG +
Preference number: 5 (lower is better)
Translates to: GGAGERLLARWALGW*GRWPGWPPAGKGHW
Trigger: CCAATGACCTTTCCCAGCAGGTGGCCAACCTGGCCATCTCCCCCACCACCCCAGGGCCCACCTGGCCAGGAGACGCTCTCCGGCTCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000423723.1
CDS-3UTR CAA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTTCCCGGCACAGCCGGTaGGCCCGCGCCAGCTCCACC +
Preference number: 5 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGSRHSR*ARASST
Trigger: GGTGGAGCTGGCGCGGGCCAACCGGCTGTGCCGGGA...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS TCA 90 bp GCGGACGAGGAAGGGCAGCAGCTGGCACACCTCCTTACGCAAGGATaGGGTCTCCTCGGCCAGCCAGGCACCCAGGATCCGCACCGAGGC +
Preference number: 5 (lower is better)
Translates to: ADEEGQQLAHLLTQG*GLLGQPGTQDPHRG
Trigger: GCCTCGGTGCGGATCCTGGGTGCCTGGCTGGCCGAGGAGACCTCATCCTTGCGTAAGGAGGTGTGCCAGCTGCTGCCCTTCCTCGTCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS GCA 90 bp GGGCTGCCAGCTTCAGTGCAGGGTTGCGCTGCCAGGAGCTCAGCTTaGTTCCCAGGATGCGTGCCAGCCCGGCCTGCAGATCCCGGTAGC +
Preference number: 5 (lower is better)
Translates to: GLPASVQGCAARSSA*FPGCVPARPADPGS
Trigger: GCTACCGGGATCTGCAGGCCGGGCTGGCACGCATCCTGGGAAGCAAGCTGAGCTCCTGGCAGCGCAACCCTGCACTGAAGCTGGCAGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS CCA 90 bp TCGGCCCAGATGCCCTCATACTCAGGGGACAGGGCTAGCACTGCCTaGTCTGAGCCCGGGGTGGCCCGCGCCACGTGGGACTGTGATAGG +
Preference number: 5 (lower is better)
Translates to: SAQMPSYSGDRASTA*SEPGVARATWDCDR
Trigger: CCTATCACAGTCCCACGTGGCGCGGGCCACCCCGGGCTCAGACCAGGCAGTGCTAGCCCTGTCCCCTGAGTATGAGGGCATCTGGGCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS TCA 90 bp GCCCCAGGTATGCCTGGCATAGGGCAGACACGGTGCCACCAGCAATaGGGTGCCGAGGCCCTCTGGGTGTGCCTGCTACAGCCGTCAGGC +
Preference number: 5 (lower is better)
Translates to: APGMPGIGQTRCHQQ*GAEALWVCLLQPSG
Trigger: GCCTGACGGCTGTAGCAGGCACACCCAGAGGGCCTCGGCACCTCATTGCTGGTGGCACCGTGTCTGCCCTATGCCAGGCATACCTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000437806.1
ENST00000459931.1
CDS GCA 90 bp ACGGAGGGCTCCCAGGTAGCGCTCCAGGGTGGGGTTTCGGCCCTCTaGCTGGTTCAGAGCTGGCTCGCAATCCGAGGCCATGATGCTCGC +
Preference number: 5 (lower is better)
Translates to: TEGSQVALQGGVSAL*LVQSWLAIRGHDAR
Trigger: GCGAGCATCATGGCCTCGGATTGCGAGCCAGCTCTGAACCAGGCAGAGGGCCGAAACCCCACCCTGGAGCGCTACCTGGGAGCCCTCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000437806.1
ENST00000459931.1
CDS GCA 90 bp GGGCCCAGATTCCTTCGCTTGTGCGTAGTTTTACCCGCCCAGCACTaGCCCTCCTCCCCCTTGGTCTCGCGGCCGGCATTGCCCTTCCCG +
Preference number: 5 (lower is better)
Translates to: GPRFLRLCVVLPAQH*PSSPLVSRPALPFP
Trigger: CGGGAAGGGCAATGCCGGCCGCGAGACCAAGGGGGAGGAGGGGCAGTGCTGGGCGGGTAAAACTACGCACAAGCGAAGGAATCTGGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS CCA 90 bp AGGGCTAGCACTGCCTGGTCTGAGCCCGGGGTGGCCCGCGCCACGTaGGACTGTGATAGGAAGAGGATGGCAGCTGCGAAGAACCCTCGG +
Preference number: 5 (lower is better)
Translates to: RASTAWSEPGVARAT*DCDRKRMAAAKNPR
Trigger: CCGAGGGTTCTTCGCAGCTGCCATCCTCTTCCTATCACAGTCCCACGTGGCGCGGGCCACCCCGGGCTCAGACCAGGCAGTGCTAGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS CCA 90 bp GGTGCCGCCGTTGCCGCCATCTTGCTTGTGGGTATTGCCCGAGTCTaGGGGCTGGGGCTCGAGCGAAGGAGGCAAGGTGCAGACTGCCTC +
Preference number: 5 (lower is better)
Translates to: GAAVAAILLVGIARV*GLGLERRRQGADCL
Trigger: GAGGCAGTCTGCACCTTGCCTCCTTCGCTCGAGCCCCAGCCCCCAGACTCGGGCAATACCCACAAGCAAGATGGCGGCAACGGCGGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS-3UTR CAA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTTGCCCCTCCTCCCCCTaGGTCTCGCGGCCGGCATTG +
Preference number: 5 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGCPSSP*VSRPAL
Trigger: CAATGCCGGCCGCGAGACCAAGGGGGAGGAGGGGCA...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS-3UTR CAA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGCTGCTCACGCCGCGTaGCCCACTCCTGGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGAAHAA*PTPGSR
Trigger: CCTGGAGCCAGGAGTGGGCAACGCGGCGTGAGCAGC...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS GCA 90 bp CTTCCAGCACTGTGTCTCGGCAGCAGCCAGCAGCCCCACCAGGAGTaGCAGGGCCTGGTCAAAGCCATAGCCGTGCCCCAGGTATGCCTG +
Preference number: 5 (lower is better)
Translates to: LPALCLGSSQQPHQE*QGLVKAIAVPQVCL
Trigger: CAGGCATACCTGGGGCACGGCTATGGCTTTGACCAGGCCCTGGCACTCCTGGTGGGGCTGCTGGCTGCTGCCGAGACACAGTGCTGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000437806.1
ENST00000459931.1
CDS GCA 90 bp TCAGTGCAGGGTTGCGCTGCCAGGAGCTCAGCTTGCTTCCCAGGATaGGTGCCAGCCCGGCCTGCAGATCCCGGTAGCATTCAGGGGGCA +
Preference number: 5 (lower is better)
Translates to: SVQGCAARSSACFPG*VPARPADPGSIQGA
Trigger: TGCCCCCTGAATGCTACCGGGATCTGCAGGCCGGGCTGGCACGCATCCTGGGAAGCAAGCTGAGCTCCTGGCAGCGCAACCCTGCACTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS GCA 90 bp CTCGCCTTGCCCAACTCCTCTCCTTTCCCTCCCTCGGGTAGAGGCTaGAGCAGCAGCAGCAGCGGCGGCGGCAGCAGCAGAATTAACCCC +
Preference number: 5 (lower is better)
Translates to: LALPNSSPFPPSGRG*SSSSSGGGSSRINP
Trigger: GGGGTTAATTCTGCTGCTGCCGCCGCCGCTGCTGCTGCTGCTGCAGCCTCTACCCGAGGGAGGGAAAGGAGAGGAGTTGGGCAAGGCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459931.1
CDS CCA 90 bp CTGCAGAAGCAGGCCAGCAGGGCCACACCCAAAGCCCGCAGAACATaGTCAGGGCAGCCATCCGGCGCCTCCTTGGTGGTCAGGAGACGA +
Preference number: 5 (lower is better)
Translates to: LQKQASRATPKARRT*SGQPSGASLVVRRR
Trigger: TCGTCTCCTGACCACCAAGGAGGCGCCGGATGGCTGCCCTGACCATGTTCTGCGGGCTTTGGGTGTGGCCCTGCTGGCCTGCTTCTGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000437806.1
ENST00000459931.1
CDS CCA 90 bp CATACTCAGGGGACAGGGCTAGCACTGCCTGGTCTGAGCCCGGGGTaGCCCGCGCCACGTGGGACTGTGATAGGAAGAGGATGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: HTQGTGLALPGLSPG*PAPRGTVIGRGWQL
Trigger: CAGCTGCCATCCTCTTCCTATCACAGTCCCACGTGGCGCGGGCCACCCCGGGCTCAGACCAGGCAGTGCTAGCCCTGTCCCCTGAGTATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS CCA 90 bp GGAGGCAAGGTGCAGACTGCCTCTGGAGAGCGGGCGGCGAGAGGCTaGGGGCCCAGATTCCTTCGCTTGTGCGTAGTTTTACCCGCCCAG +
Preference number: 5 (lower is better)
Translates to: GGKVQTASGERAARG*GPRFLRLCVVLPAQ
Trigger: CTGGGCGGGTAAAACTACGCACAAGCGAAGGAATCTGGGCCCCCAGCCTCTCGCCGCCCGCTCTCCAGAGGCAGTCTGCACCTTGCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS-3UTR CAA 90 bp TTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCCCCCCATCCGGCGCCTCCTaGGTGGTCAGGAGACGATTG +
Preference number: 5 (lower is better)
Translates to: FPGLAGTTTLISKPIPAPPSGAS*VVRRRL
Trigger: CAATCGTCTCCTGACCACCAAGGAGGCGCCGGATGG...GGGGGCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAA
66% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp TTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCCCCTGCTGGGAAAGGTCATaGGCCTCCTCGGCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: FPGLAGTTTLISKPIPAPCWERS*ASSASS
Trigger: CGAGGAGGCCGAGGAGGCCAATGACCTTTCCCAGCA...GGGGGCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS GCA 90 bp AGGTATGCCTGGCATAGGGCAGACACGGTGCCACCAGCAATGAGGTaGCGAGGCCCTCTGGGTGTGCCTGCTACAGCCGTCAGGCACTGG +
Preference number: 5 (lower is better)
Translates to: RYAWHRADTVPPAMR*RGPLGVPATAVRHW
Trigger: CCAGTGCCTGACGGCTGTAGCAGGCACACCCAGAGGGCCTCGGCACCTCATTGCTGGTGGCACCGTGTCTGCCCTATGCCAGGCATACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000437806.1
ENST00000459931.1
CDS GCA 90 bp CCCGGTGCGGTGACCACGAGGTTGAGGAAGATGTGGCAGCAGGTCTaGAGGCCAATCTCCACGCTGTCAGGCAGCACCGAGGTGTCGTGG +
Preference number: 5 (lower is better)
Translates to: PGAVTTRLRKMWQQV*RPISTLSGSTEVSW
Trigger: CCACGACACCTCGGTGCTGCCTGACAGCGTGGAGATTGGCCTGCAGACCTGCTGCCACATCTTCCTCAACCTCGTGGTCACCGCACCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000423723.1
CDS GCA 90 bp AGGCCTGCATGCCCAGGAACCAGAGCTCCTGCAGGTCGGCCCAGATaGCCTCATACTCAGGGGACAGGGCTAGCACTGCCTGGTCTGAGC +
Preference number: 5 (lower is better)
Translates to: RPACPGTRAPAGRPR*PHTQGTGLALPGLS
Trigger: GCTCAGACCAGGCAGTGCTAGCCCTGTCCCCTGAGTATGAGGGCATCTGGGCCGACCTGCAGGAGCTCTGGTTCCTGGGCATGCAGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS CCA 90 bp GTAGCGCTCCAGGGTGGGGTTTCGGCCCTCTGCCTGGTTCAGAGCTaGCTCGCAATCCGAGGCCATGATGCTCGCCTTGCCCAACTGTCC +
Preference number: 5 (lower is better)
Translates to: VALQGGVSALCLVQS*LAIRGHDARLAQLS
Trigger: GGACAGTTGGGCAAGGCGAGCATCATGGCCTCGGATTGCGAGCCAGCTCTGAACCAGGCAGAGGGCCGAAACCCCACCCTGGAGCGCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356090.8
ENST00000373243.7
CDS CCA 90 bp GTAGCGCTCCAGGGTGGGGTTTCGGCCCTCTGCCTGGTTCAGAGCTaGCTCGCAATCCGAGGCCATGATGCTCGCCTTGCCCAACAGGCT +
Preference number: 5 (lower is better)
Translates to: VALQGGVSALCLVQS*LAIRGHDARLAQQA
Trigger: AGCCTGTTGGGCAAGGCGAGCATCATGGCCTCGGATTGCGAGCCAGCTCTGAACCAGGCAGAGGGCCGAAACCCCACCCTGGAGCGCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS CCA 90 bp GTAGCGCTCCAGGGTGGGGTTTCGGCCCTCTGCCTGGTTCAGAGCTaGCTCGCAATCCGAGGCCATGATGCTCGCCTTGCCCAACTCCTC +
Preference number: 5 (lower is better)
Translates to: VALQGGVSALCLVQS*LAIRGHDARLAQLL
Trigger: GAGGAGTTGGGCAAGGCGAGCATCATGGCCTCGGATTGCGAGCCAGCTCTGAACCAGGCAGAGGGCCGAAACCCCACCCTGGAGCGCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459931.1
CDS-3UTR CAA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCAAGCAGGCGTCACGCTaGATCAGCCCCGGTGCGGTG +
Preference number: 5 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCKQASR*ISPGAV
Trigger: CACCGCACCGGGGCTGATCAAGCGTGACGCCTGCTT...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS GCA 90 bp CCGGGCTCTGGCCAATGGCAAGTCAGGGTGCTAAGCAGTAGGGGGTaGCGCCGTTGCCGCCATCTTGCTTGTGGGTATTGCCCGAGTCTG +
Preference number: 5 (lower is better)
Translates to: PGSGQWQVRVLSSRG*RRCRHLACGYCPSL
Trigger: CAGACTCGGGCAATACCCACAAGCAAGATGGCGGCAACGGCGGCACCCCCTACTGCTTAGCACCCTGACTTGCCATTGGCCAGAGCCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS CCA 90 bp TGGTGGGGGAGATGGCCAGGTTGGCCACCTGCTGGGAAAGGTCATTaGCCTCCTCGGCCTCCTCGTAGAGGGTCTTGGCATAGCGGACGA +
Preference number: 5 (lower is better)
Translates to: WWGRWPGWPPAGKGH*PPRPPRRGSWHSGR
Trigger: TCGTCCGCTATGCCAAGACCCTCTACGAGGAGGCCGAGGAGGCCAATGACCTTTCCCAGCAGGTGGCCAACCTGGCCATCTCCCCCACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000423723.1
CDS CCA 90 bp CGCTTGATCAGCCCCGGTGCGGTGACCACGAGGTTGAGGAAGATGTaGCAGCAGGTCTGCAGGCCAATCTCCACGCTGTCAGGCAGCACC +
Preference number: 5 (lower is better)
Translates to: RLISPGAVTTRLRKM*QQVCRPISTLSGST
Trigger: GGTGCTGCCTGACAGCGTGGAGATTGGCCTGCAGACCTGCTGCCACATCTTCCTCAACCTCGTGGTCACCGCACCGGGGCTGATCAAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000423723.1
CDS CCA 90 bp GTAGCGCTCCAGGGTGGGGTTTCGGCCCTCTGCCTGGTTCAGAGCTaGCTCGCAATCCGAGGCCATGATGCTCGCCTTGCCCAAATGGGT +
Preference number: 5 (lower is better)
Translates to: VALQGGVSALCLVQS*LAIRGHDARLAQMG
Trigger: ACCCATTTGGGCAAGGCGAGCATCATGGCCTCGGATTGCGAGCCAGCTCTGAACCAGGCAGAGGGCCGAAACCCCACCCTGGAGCGCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437806.1
CDS-3UTR CAA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCTGCCAGGAGCTCAGCTaGCTTCCCAGGATGCGTGCC +
Preference number: 5 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCCQELS*LPRMRA
Trigger: GGCACGCATCCTGGGAAGCAAGCTGAGCTCCTGGCA...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTTGCTGGGAAAGGTCATaGGCCTCCTCGGCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGCWERS*ASSASS
Trigger: CGAGGAGGCCGAGGAGGCCAATGACCTTTCCCAGCA...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS CCA 90 bp CCTTGGTCACTAGCAGCAGGGCTGCAAACTGCTCGCTGTCATTCTTaGCCTCACGGAGGGCTCCCAGGTAGCGCTCCAGGGTGGGGTTTC +
Preference number: 5 (lower is better)
Translates to: PWSLAAGLQTARCHS*PHGGLPGSAPGWGF
Trigger: GAAACCCCACCCTGGAGCGCTACCTGGGAGCCCTCCGTGAGGCCAAGAATGACAGCGAGCAGTTTGCAGCCCTGCTGCTAGTGACCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000437806.1
ENST00000459931.1
CDS CCA 90 bp GGCAGCAGCTGGCAGAGCTCAAACTTGCTGGCATCCTCAGCTTTCTaGAAATCCTCACTGAGGCCCCGCAACACGGCCAGCAGGTCGGGC +
Preference number: 5 (lower is better)
Translates to: GSSWQSSNLLASSAF*KSSLRPRNTASRSG
Trigger: GCCCGACCTGCTGGCCGTGTTGCGGGGCCTCAGTGAGGATTTCCAGAAAGCTGAGGATGCCAGCAAGTTTGAGCTCTGCCAGCTGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000437806.1
CDS CCA 90 bp AAATGGAGTCTCGACAGGGCACGATGGTGTCGCGATATGGCGCGATaGAGTCGCGATAGGGTCCCCGGGGTGTGTCGGCATCGATCAGCG +
Preference number: 5 (lower is better)
Translates to: KWSLDRARWCRDMAR*SRDRVPGVCRHRSA
Trigger: CGCTGATCGATGCCGACACACCCCGGGGACCCTATCGCGACTCCATCGCGCCATATCGCGACACCATCGTGCCCTGTCGAGACTCCATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373243.7
CDS-3UTR CAA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGGGGGAGATGGCCAGGTaGGCCACCTGCTGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQGEMAR*ATCWER
Trigger: CCTTTCCCAGCAGGTGGCCAACCTGGCCATCTCCCC...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGCGGTGACCACGAGGTaGAGGAAGATGTGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGAVTTR*RKMWQQ
Trigger: CTGCTGCCACATCTTCCTCAACCTCGTGGTCACCGC...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTTCGGGCTTGACAGAGTaGGGGCTGACACTGCCTAGC +
Preference number: 5 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGSGLTE*GLTLPS
Trigger: GCTAGGCAGTGTCAGCCCCAACTCTGTCAAGCCCGA...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCTCGGGCTTGACAGAGTaGGGGCTGACACTGCCTAGC +
Preference number: 5 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCSGLTE*GLTLPS
Trigger: GCTAGGCAGTGTCAGCCCCAACTCTGTCAAGCCCGA...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp GGAGGCAGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCATCCCGGCACAGCCGGTaGGCCCGCGCCAGCTCCACC +
Preference number: 5 (lower is better)
Translates to: GGSSDPGSLKLIGRTAISSRHSR*ARASST
Trigger: GGTGGAGCTGGCGCGGGCCAACCGGCTGTGCCGGGA...TGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACTGCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACGCCATGATGCTCGCCTaGCCCAACAGGCTGCGGCCC +
Preference number: 5 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHAMMLA*PNRLRP
Trigger: GGGCCGCAGCCTGTTGGGCAAGGCGAGCATCATGGC...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS TCA 90 bp AGAGCTCAAACTTGCTGGCATCCTCAGCTTTCTGGAAATCCTCACTaGGGCCCCGCAACACGGCCAGCAGGTCGGGCTCCGCCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: RAQTCWHPQLSGNPH*GPATRPAGRAPPPS
Trigger: GGAAGGAGGCGGAGCCCGACCTGCTGGCCGTGTTGCGGGGCCTCAGTGAGGATTTCCAGAAAGCTGAGGATGCCAGCAAGTTTGAGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000437806.1
CDS TCA 90 bp TCTCCACGCTGTCAGGCAGCACCGAGGTGTCGTGGCCAGGGGATGTaGGTTCCCACTGCTGCAGGAAATACTTGCACAGAAGCGAGGGGG +
Preference number: 5 (lower is better)
Translates to: SPRCQAAPRCRGQGM*VPTAAGNTCTEARG
Trigger: CCCCCTCGCTTCTGTGCAAGTATTTCCTGCAGCAGTGGGAACTCACATCCCCTGGCCACGACACCTCGGTGCTGCCTGACAGCGTGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000423723.1
CDS-3UTR CAA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGGCCATGATGCTCGCCTaGCCCAACTGTCCCGCCGCA +
Preference number: 5 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRAMMLA*PNCPAA
Trigger: TGCGGCGGGACAGTTGGGCAAGGCGAGCATCATGGC...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356090.8
ENST00000373243.7
CDS-3UTR CAA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGTGCCAGGAGCTCAGCTaGCTTCCCAGGATGCGTGCC +
Preference number: 5 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQCQELS*LPRMRA
Trigger: GGCACGCATCCTGGGAAGCAAGCTGAGCTCCTGGCA...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGGGGGAGATGGCCAGGTaGGCCACCTGCTGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRGEMAR*ATCWER
Trigger: CCTTTCCCAGCAGGTGGCCAACCTGGCCATCTCCCC...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp CTTGGCAGCAACCCAGTGACATGGGGGCGGGGGTGCAGTGTTTCATCTGTACTTGGGGAGATGGCCAGGTaGGCCACCTGCTGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: LGSNPVTWGRGCSVSSVLGEMAR*ATCWER
Trigger: CCTTTCCCAGCAGGTGGCCAACCTGGCCATCTCCCC...AAGTACAGATGAAACACTGCACCCCCGCCCCCATGTCACTGGGTTGCTGCCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR CAA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCTGCTGCAGGAAATACTaGCACAGAAGCGAGGGGGCC +
Preference number: 5 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCCCRKY*HRSEGA
Trigger: GGCCCCCTCGCTTCTGTGCAAGTATTTCCTGCAGCA...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS TCA 90 bp AGCCATCCGGCGCCTCCTTGGTGGTCAGGAGACGATTGGGGAAGGTaGAGCCGACAGCATCGAAGATCCGCCGCCGAGTTTTGGCATCTA +
Preference number: 5 (lower is better)
Translates to: SHPAPPWWSGDDWGR*SRQHRRSAAEFWHL
Trigger: TAGATGCCAAAACTCGGCGGCGGATCTTCGATGCTGTCGGCTTCACCTTCCCCAATCGTCTCCTGACCACCAAGGAGGCGCCGGATGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000437806.1
ENST00000459931.1
CDS GCA 90 bp GAATCTTGTTCAGGACTTGGGGATGGGCGGCCAGTTCAGGGTCACTaGAGAAGCAGGCCAGCAGGGCCACACCCAAAGCCCGCAGAACAT +
Preference number: 5 (lower is better)
Translates to: ESCSGLGDGRPVQGH*RSRPAGPHPKPAEH
Trigger: ATGTTCTGCGGGCTTTGGGTGTGGCCCTGCTGGCCTGCTTCTGCAGTGACCCTGAACTGGCCGCCCATCCCCAAGTCCTGAACAAGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000437806.1
ENST00000459931.1
CDS-3UTR CAA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCAATCTTGTTCAGGACTaGGGGATGGGCGGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCNLVQD*GMGGQF
Trigger: GAACTGGCCGCCCATCCCCAAGTCCTGAACAAGATT...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp TATCAATGGCCTAAGCCTGCTGTCTGCCCAAGGGAGCCAAGGGCAAGAGCCAAAAAGCAGGCGTCACGCTaGATCAGCCCCGGTGCGGTG +
Preference number: 5 (lower is better)
Translates to: YQWPKPAVCPREPRARAKKQASR*ISPGAV
Trigger: CACCGCACCGGGGCTGATCAAGCGTGACGCCTGCTT...TTTGGCTCTTGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGGCCATTGATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGGCCACCATCTCGGGCTaGACAGAGTTGGGGCTGACA +
Preference number: 5 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQATISG*TELGLT
Trigger: TGTCAGCCCCAACTCTGTCAAGCCCGAGATGGTGGC...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGCGCAGTTCCTTACACTaGAGGGGTGGGCACCATGCC +
Preference number: 5 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQRSSLH*RGGHHA
Trigger: GGCATGGTGCCCACCCCTCAAGTGTAAGGAACTGCG...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS TCA 90 bp GCAGTGACTGCTCACAGCGAGTGCATTCCTGGATCCCCAACTCCATaGGGGCATAGCAGGCGGTCACCACATCCTCTTTCACCTCCGTGC +
Preference number: 5 (lower is better)
Translates to: AVTAHSECIPGSPTP*GHSRRSPHPLSPPC
Trigger: GCACGGAGGTGAAAGAGGATGTGGTGACCGCCTGCTATGCCCTCATGGAGTTGGGGATCCAGGAATGCACTCGCTGTGAGCAGTCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS CCA 90 bp GTGAGGAAGGTGCTAAGAATGGGAATCTTGTTCAGGACTTGGGGATaGGCGGCCAGTTCAGGGTCACTGCAGAAGCAGGCCAGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: VRKVLRMGILFRTWG*AASSGSLQKQASRA
Trigger: GGCCCTGCTGGCCTGCTTCTGCAGTGACCCTGAACTGGCCGCCCATCCCCAAGTCCTGAACAAGATTCCCATTCTTAGCACCTTCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000437806.1
ENST00000459931.1
CDS CCA 90 bp CGGGCTGTGAGGAAGGTGCTAAGAATGGGAATCTTGTTCAGGACTTaGGGATGGGCGGCCAGTTCAGGGTCACTGCAGAAGCAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: RAVRKVLRMGILFRT*GWAASSGSLQKQAS
Trigger: GCTGGCCTGCTTCTGCAGTGACCCTGAACTGGCCGCCCATCCCCAAGTCCTGAACAAGATTCCCATTCTTAGCACCTTCCTCACAGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000437806.1
ENST00000459931.1
CDS-3UTR CAA 90 bp CTGGCTCCAGCCAGGCCAGATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGGTCACAACACGACATaGATGAAGTCACGACAGGGC +
Preference number: 5 (lower is better)
Translates to: LAPARPDGTRGTGIRCSGGHNTT*MKSRQG
Trigger: GCCCTGTCGTGACTTCATCAATGTCGTGTTGTGACC...ACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATCTGGCCTGGCTGGAGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356090.8
ENST00000373243.7
CDS-3UTR CAA 90 bp TTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCCCCCTAAGAATGGGAATCTaGTTCAGGACTTGGGGATGG +
Preference number: 5 (lower is better)
Translates to: FPGLAGTTTLISKPIPAPLRMGI*FRTWGW
Trigger: CCATCCCCAAGTCCTGAACAAGATTCCCATTCTTAG...GGGGGCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp GTGTGTGTGTGTGTGTGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTGGGGGGAGATGGCCAGGTaGGCCACCTGCTGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: VCVCVWSPWVYKKGSPCWGEMAR*ATCWER
Trigger: CCTTTCCCAGCAGGTGGCCAACCTGGCCATCTCCCC...CCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACAC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACGCCACCATCTCGGGCTaGACAGAGTTGGGGCTGACA +
Preference number: 5 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHATISG*TELGLT
Trigger: TGTCAGCCCCAACTCTGTCAAGCCCGAGATGGTGGC...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGCGCAGTTCCTTACACTaGAGGGGTGGGCACCATGCC +
Preference number: 5 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRRSSLH*RGGHHA
Trigger: GGCATGGTGCCCACCCCTCAAGTGTAAGGAACTGCG...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp CCCAAAGACTCTGGGTCCCTTCAAGCAAGCTCAGGTGGAAGGAGGTTTCCCCACCCTGCTTTGACTGCCTaGGTCACTAGCAGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: PKDSGSLQASSGGRRFPHPALTA*VTSSRA
Trigger: AGCCCTGCTGCTAGTGACCAAGGCAGTCAAAGCAGG...GTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAGGGACCCAGAGTCTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGGTGGTCAGGAGACGATaGGGGAAGGTGAAGCCGACA +
Preference number: 5 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRVVRRR*GKVKPT
Trigger: TGTCGGCTTCACCTTCCCCAATCGTCTCCTGACCAC...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTCCATCCGGCGCCTCCTaGGTGGTCAGGAGACGATTG +
Preference number: 5 (lower is better)
Translates to: QWSVITGETCGFWGSVPPPSGAS*VVRRRL
Trigger: CAATCGTCTCCTGACCACCAAGGAGGCGCCGGATGG...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp CACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGTTCCTGGCTCCAGAATCTTGTTCAGGACTaGGGGATGGGCGGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: HWGNMRILGKCPSCSWLQNLVQD*GMGGQF
Trigger: GAACTGGCCGCCCATCCCCAAGTCCTGAACAAGATT...CTGGAGCCAGGAACAGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTTGCCAGGAGCTCAGCTaGCTTCCCAGGATGCGTGCC +
Preference number: 5 (lower is better)
Translates to: QWSVITGETCGFWGSVPPCQELS*LPRMRA
Trigger: GGCACGCATCCTGGGAAGCAAGCTGAGCTCCTGGCA...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTTGCTGGGAAAGGTCATaGGCCTCCTCGGCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: QWSVITGETCGFWGSVPPCWERS*ASSASS
Trigger: CGAGGAGGCCGAGGAGGCCAATGACCTTTCCCAGCA...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGTGCTGCAGGAAATACTaGCACAGAAGCGAGGGGGCC +
Preference number: 5 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRCCRKY*HRSEGA
Trigger: GGCCCCCTCGCTTCTGTGCAAGTATTTCCTGCAGCA...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp ACTTGGCAGCAACCCAGTGACATGGGGGCGGGGGTGCAGTGTTTCATCTGTACTTGCTGCAGGAAATACTaGCACAGAAGCGAGGGGGCC +
Preference number: 5 (lower is better)
Translates to: TWQQPSDMGAGVQCFICTCCRKY*HRSEGA
Trigger: GGCCCCCTCGCTTCTGTGCAAGTATTTCCTGCAGCA...AGTACAGATGAAACACTGCACCCCCGCCCCCATGTCACTGGGTTGCTGCCAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR CAA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGGCGGTGACCACGAGGTaGAGGAAGATGTGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: TTVAVECNHWGNMRILGKAVTTR*RKMWQQ
Trigger: CTGCTGCCACATCTTCCTCAACCTCGTGGTCACCGC...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCTGCACAGCTTTGAACTaGGCGATCACAGAACGCACT +
Preference number: 5 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCCTALN*AITERT
Trigger: AGTGCGTTCTGTGATCGCCAAGTTCAAAGCTGTGCA...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp TATCAATGGCCTAAGCCTGCTGTCTGCCCAAGGGAGCCAAGGGCAAGAGCCAAAGCCGTTGCCGCCATCTaGCTTGTGGGTATTGCCCGA +
Preference number: 5 (lower is better)
Translates to: YQWPKPAVCPREPRARAKAVAAI*LVGIAR
Trigger: TCGGGCAATACCCACAAGCAAGATGGCGGCAACGGC...TTTGGCTCTTGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGGCCATTGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS-3UTR CAA 90 bp GGAGGCAGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAACCCCCGCACCGCTCTaGACGAATCCGCGGCTGCTT +
Preference number: 5 (lower is better)
Translates to: GGSSDPGSLKLIGRTAISTPAPL*TNPRLL
Trigger: AAGCAGCCGCGGATTCGTCAAGAGCGGTGCGGGGGT...TGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACTGCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS-3UTR CAA 90 bp AAATGGGAGGATATGGCAGGGCCACTTGGCAGCAACCCAGTGACATGGGGGCGGGTGTTTCATCTGTACTaGAGAGCACCAGAGCCCCCA +
Preference number: 5 (lower is better)
Translates to: KWEDMAGPLGSNPVTWGRVFHLY*RAPEPP
Trigger: TGGGGGCTCTGGTGCTCTCAAGTACAGATGAAACAC...CCGCCCCCATGTCACTGGGTTGCTGCCAAGTGGCCCTGCCATATCCTCCCATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS GCA 90 bp ATGACGCTCACGAGCTGCACCTTCTGTGGCTCCTTAAGCAGTGACTaGTCACAGCGAGTGCATTCCTGGATCCCCAACTCCATGAGGGCA +
Preference number: 5 (lower is better)
Translates to: MTLTSCTFCGSLSSD*SQRVHSWIPNSMRA
Trigger: TGCCCTCATGGAGTTGGGGATCCAGGAATGCACTCGCTGTGAGCAGTCACTGCTTAAGGAGCCACAGAAGGTGCAGCTCGTGAGCGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS GCA 90 bp AGCCCCAGGGTGGCCACATTAGCAGCCAGAAGCAGCCTTCCCTGTTaGTGCACTAGTGCTGGTAGCGACGTCATGAGGGTGTTCATTAGA +
Preference number: 5 (lower is better)
Translates to: SPRVATLAARSSLPC*CTSAGSDVMRVFIR
Trigger: TCTAATGAACACCCTCATGACGTCGCTACCAGCACTAGTGCAGCAACAGGGAAGGCTGCTTCTGGCTGCTAATGTGGCCACCCTGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000423723.1
CDS-3UTR CAA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCGCCATGATGCTCGCCTaGCCCAACTGTCCCGCCGCA +
Preference number: 5 (lower is better)
Translates to: SSDPGSLKLIGRTAISMAAMMLA*PNCPAA
Trigger: TGCGGCGGGACAGTTGGGCAAGGCGAGCATCATGGC...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356090.8
ENST00000373243.7
CDS-3UTR CAA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGCCTGCTTTGACTGCCTaGGTCACTAGCAGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: TTVAVECNHWGNMRILGKPALTA*VTSSRA
Trigger: AGCCCTGCTGCTAGTGACCAAGGCAGTCAAAGCAGG...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCTAAGAATGGGAATCTaGTTCAGGACTTGGGGATGG +
Preference number: 5 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCLRMGI*FRTWGW
Trigger: CCATCCCCAAGTCCTGAACAAGATTCCCATTCTTAG...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp GTGTGTGTGTGTGTGTGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTGGGCGGTGACCACGAGGTaGAGGAAGATGTGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: VCVCVWSPWVYKKGSPCWAVTTR*RKMWQQ
Trigger: CTGCTGCCACATCTTCCTCAACCTCGTGGTCACCGC...CCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCAAGCAGGCGTCACGCTaGATCAGCCCCGGTGCGGTG +
Preference number: 5 (lower is better)
Translates to: SSDPGSLKLIGRTAISMAKQASR*ISPGAV
Trigger: CACCGCACCGGGGCTGATCAAGCGTGACGCCTGCTT...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp CCCACAAGGCCTGGCCACATCAACATGAGTTTGGCAATCTGCTGTACAAGTGAAAAGCAGGCGTCACGCTaGATCAGCCCCGGTGCGGTG +
Preference number: 5 (lower is better)
Translates to: PTRPGHINMSLAICCTSEKQASR*ISPGAV
Trigger: CACCGCACCGGGGCTGATCAAGCGTGACGCCTGCTT...TTCACTTGTACAGCAGATTGCCAAACTCATGTTGATGTGGCCAGGCCTTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR CAA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGCCACCATCTCGGGCTaGACAGAGTTGGGGCTGACA +
Preference number: 5 (lower is better)
Translates to: QWSVITGETCGFWGSVPPATISG*TELGLT
Trigger: TGTCAGCCCCAACTCTGTCAAGCCCGAGATGGTGGC...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGGCGGGGACAACCACGTaGATTTCCAAGCCGATCCCT +
Preference number: 5 (lower is better)
Translates to: TTVAVECNHWGNMRILGKAGTTT*ISKPIP
Trigger: AGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGC...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp AACCTTCCCCGGCCTGGCGGGGACAACCACGTTGATTTCCAAGCCGATCCCTGCCACATGTGCACAGCTTaGAACTTGGCGATCACAGAA +
Preference number: 5 (lower is better)
Translates to: NLPRPGGDNHVDFQADPCHMCTA*NLAITE
Trigger: TTCTGTGATCGCCAAGTTCAAAGCTGTGCACATGTG...GCAGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGCCAGGCCGGGGAAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS TCA 90 bp CTTCATGACGCTCACGAGCTGCACCTTCTGTGGCTCCTTAAGCAGTaGCTGCTCACAGCGAGTGCATTCCTGGATCCCCAACTCCATGAG +
Preference number: 5 (lower is better)
Translates to: LHDAHELHLLWLLKQ*LLTASAFLDPQLHE
Trigger: CTCATGGAGTTGGGGATCCAGGAATGCACTCGCTGTGAGCAGTCACTGCTTAAGGAGCCACAGAAGGTGCAGCTCGTGAGCGTCATGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS TCA 90 bp AGTCACGACAGGGCGGCGATGAGATCACACTTCACGATGGCGCGGTaGTGTCACGGAGAGATCACGTCAAAATCACGACATGGGAGACAG +
Preference number: 5 (lower is better)
Translates to: SHDRAAMRSHFTMAR*CHGEITSKSRHGRQ
Trigger: CTGTCTCCCATGTCGTGATTTTGACGTGATCTCTCCGTGACATCACCGCGCCATCGTGAAGTGTGATCTCATCGCCGCCCTGTCGTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373243.7
CDS TCA 90 bp GCCAGGTCACAACACGACATTGATGAAGTCACGACAGGGCGGCGATaGGATCACACTTCACGATGGCGCGGTGATGTCACGGAGAGATCA +
Preference number: 5 (lower is better)
Translates to: ARSQHDIDEVTTGRR*DHTSRWRGDVTERS
Trigger: TGATCTCTCCGTGACATCACCGCGCCATCGTGAAGTGTGATCTCATCGCCGCCCTGTCGTGACTTCATCAATGTCGTGTTGTGACCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373243.7
CDS-3UTR CAA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCTGCTCGCTGTCATTCTaGGCCTCACGGAGGGCTCCC +
Preference number: 5 (lower is better)
Translates to: SSDPGSLKLIGRTAISMACSLSF*ASRRAP
Trigger: GGGAGCCCTCCGTGAGGCCAAGAATGACAGCGAGCA...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGATCCGCCGCCGAGTTTaGGCATCTATGTCACCTGCT +
Preference number: 5 (lower is better)
Translates to: TTVAVECNHWGNMRILGKIRRRV*ASMSPA
Trigger: AGCAGGTGACATAGATGCCAAAACTCGGCGGCGGAT...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCCCATCCGGCGCCTCCTaGGTGGTCAGGAGACGATTG +
Preference number: 5 (lower is better)
Translates to: SSDPGSLKLIGRTAISMAPSGAS*VVRRRL
Trigger: CAATCGTCTCCTGACCACCAAGGAGGCGCCGGATGG...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp TATCAATGGCCTAAGCCTGCTGTCTGCCCAAGGGAGCCAAGGGCAAGAGCCAAAAATCTTGTTCAGGACTaGGGGATGGGCGGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: YQWPKPAVCPREPRARAKNLVQD*GMGGQF
Trigger: GAACTGGCCGCCCATCCCCAAGTCCTGAACAAGATT...TTTGGCTCTTGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGGCCATTGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp GATGGCACCAGGGGGACAGGAATCAGATGCTCAGGTGTCCAAGCAGGGATAAGGTGGCAGAGCTCAAACTaGCTGGCATCCTCAGCTTTC +
Preference number: 5 (lower is better)
Translates to: DGTRGTGIRCSGVQAGIRWQSSN*LASSAF
Trigger: GAAAGCTGAGGATGCCAGCAAGTTTGAGCTCTGCCA...CCTTATCCCTGCTTGGACACCTGAGCATCTGATTCCTGTCCCCCTGGTGCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp GGAGGCAGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCACGCAGTTCCTTACACTaGAGGGGTGGGCACCATGCC +
Preference number: 5 (lower is better)
Translates to: GGSSDPGSLKLIGRTAISRSSLH*RGGHHA
Trigger: GGCATGGTGCCCACCCCTCAAGTGTAAGGAACTGCG...TGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACTGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp GTGTGTGTGTGTGTGTGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTGGGCGGGGACAACCACGTaGATTTCCAAGCCGATCCCT +
Preference number: 5 (lower is better)
Translates to: VCVCVWSPWVYKKGSPCWAGTTT*ISKPIP
Trigger: AGGGATCGGCTTGGAAATCAACGTGGTTGTCCCCGC...CCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGCCCAGATTCCTTCGCTaGTGCGTAGTTTTACCCGCC +
Preference number: 5 (lower is better)
Translates to: TTVAVECNHWGNMRILGKPRFLR*CVVLPA
Trigger: GGCGGGTAAAACTACGCACAAGCGAAGGAATCTGGG...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS-3UTR CAA 90 bp GGAGGCAGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAGTGGTCAGGAGACGATaGGGGAAGGTGAAGCCGACA +
Preference number: 5 (lower is better)
Translates to: GGSSDPGSLKLIGRTAISVVRRR*GKVKPT
Trigger: TGTCGGCTTCACCTTCCCCAATCGTCTCCTGACCAC...TGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACTGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGGCAGAGCTCAAACTaGCTGGCATCCTCAGCTTTC +
Preference number: 5 (lower is better)
Translates to: TTVAVECNHWGNMRILGKWQSSN*LASSAF
Trigger: GAAAGCTGAGGATGCCAGCAAGTTTGAGCTCTGCCA...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp AGGATTCCTGACTTCTTTAAAAATGGGAGGATATGGCAGGGCCACTTGGCAGCATGCTGGGAAAGGTCATaGGCCTCCTCGGCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: RIPDFFKNGRIWQGHLAACWERS*ASSASS
Trigger: CGAGGAGGCCGAGGAGGCCAATGACCTTTCCCAGCA...TGCTGCCAAGTGGCCCTGCCATATCCTCCCATTTTTAAAGAAGTCAGGAATCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR CAA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCTCGGGCTTGACAGAGTaGGGGCTGACACTGCCTAGC +
Preference number: 5 (lower is better)
Translates to: SSDPGSLKLIGRTAISMASGLTE*GLTLPS
Trigger: GCTAGGCAGTGTCAGCCCCAACTCTGTCAAGCCCGA...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTTTGCCGCCATCTTGCTaGTGGGTATTGCCCGAGTCT +
Preference number: 5 (lower is better)
Translates to: QWSVITGETCGFWGSVPPLPPSC*WVLPES
Trigger: AGACTCGGGCAATACCCACAAGCAAGATGGCGGCAA...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS-3UTR CAA 90 bp CAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGTCCCTCCTGGTCACAACACGACATaGATGAAGTCACGACAGGGC +
Preference number: 5 (lower is better)
Translates to: QWSVITGETCGFWGSVPPGHNTT*MKSRQG
Trigger: GCCCTGTCGTGACTTCATCAATGTCGTGTTGTGACC...AGGAGGGACACTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356090.8
ENST00000373243.7
CDS-3UTR CAA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTCTATGTCACCTGCTTaGACTGCCTTGGTCACTAGC +
Preference number: 5 (lower is better)
Translates to: TTVAVECNHWGNMRILGKSMSPA*TALVTS
Trigger: GCTAGTGACCAAGGCAGTCAAAGCAGGTGACATAGA...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCGTGGTCAGGAGACGATaGGGGAAGGTGAAGCCGACA +
Preference number: 5 (lower is better)
Translates to: SSDPGSLKLIGRTAISMAVVRRR*GKVKPT
Trigger: TGTCGGCTTCACCTTCCCCAATCGTCTCCTGACCAC...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCTGCTGCAGGAAATACTaGCACAGAAGCGAGGGGGCC +
Preference number: 5 (lower is better)
Translates to: SSDPGSLKLIGRTAISMACCRKY*HRSEGA
Trigger: GGCCCCCTCGCTTCTGTGCAAGTATTTCCTGCAGCA...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp ACCACGGTGGCAGTGGAGTGTAATCACTGGGGAAACATGCGGATTCTGGGGAAGTGCACAGCTTTGAACTaGGCGATCACAGAACGCACT +
Preference number: 5 (lower is better)
Translates to: TTVAVECNHWGNMRILGKCTALN*AITERT
Trigger: AGTGCGTTCTGTGATCGCCAAGTTCAAAGCTGTGCA...CTTCCCCAGAATCCGCATGTTTCCCCAGTGATTACACTCCACTGCCACCGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS TCA 90 bp TTCCTTTCCCCTCCCTTCTTCAGAGGCAGAGATACGCTTCAGAAGTaGGAATACAAGACGCTCAACAGGGAAGGCTTGGAGGCCCCTTTG +
Preference number: 5 (lower is better)
Translates to: FLSPPFFRGRDTLQK*EYKTLNREGLEAPL
Trigger: CAAAGGGGCCTCCAAGCCTTCCCTGTTGAGCGTCTTGTATTCTCACTTCTGAAGCGTATCTCTGCCTCTGAAGAAGGGAGGGGAAAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437806.1
CDS-3UTR CAA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCATCCGCCGCCGAGTTTaGGCATCTATGTCACCTGCT +
Preference number: 5 (lower is better)
Translates to: SSDPGSLKLIGRTAISMAIRRRV*ASMSPA
Trigger: AGCAGGTGACATAGATGCCAAAACTCGGCGGCGGAT...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp TATCAATGGCCTAAGCCTGCTGTCTGCCCAAGGGAGCCAAGGGCAAGAGCCAAACTAAGAATGGGAATCTaGTTCAGGACTTGGGGATGG +
Preference number: 5 (lower is better)
Translates to: YQWPKPAVCPREPRARAKLRMGI*FRTWGW
Trigger: CCATCCCCAAGTCCTGAACAAGATTCCCATTCTTAG...TTTGGCTCTTGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGGCCATTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp GTGTGTGTGTGTGTGTGGTCCCCCTGGGTTTATAAGAAAGGTAGTCCCTGCTGGTGCACAGCTTTGAACTaGGCGATCACAGAACGCACT +
Preference number: 5 (lower is better)
Translates to: VCVCVWSPWVYKKGSPCWCTALN*AITERT
Trigger: AGTGCGTTCTGTGATCGCCAAGTTCAAAGCTGTGCA...CCAGCAGGGACTACCTTTCTTATAAACCCAGGGGGACCACACACACACACACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp TATCAATGGCCTAAGCCTGCTGTCTGCCCAAGGGAGCCAAGGGCAAGAGCCAAACACATGTGCACAGCTTaGAACTTGGCGATCACAGAA +
Preference number: 5 (lower is better)
Translates to: YQWPKPAVCPREPRARAKHMCTA*NLAITE
Trigger: TTCTGTGATCGCCAAGTTCAAAGCTGTGCACATGTG...TTTGGCTCTTGCCCTTGGCTCCCTTGGGCAGACAGCAGGCTTAGGCCATTGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCTGGCAGAGCTCAAACTaGCTGGCATCCTCAGCTTTC +
Preference number: 5 (lower is better)
Translates to: SSDPGSLKLIGRTAISMAWQSSN*LASSAF
Trigger: GAAAGCTGAGGATGCCAGCAAGTTTGAGCTCTGCCA...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCTCTATGTCACCTGCTTaGACTGCCTTGGTCACTAGC +
Preference number: 5 (lower is better)
Translates to: SSDPGSLKLIGRTAISMASMSPA*TALVTS
Trigger: GCTAGTGACCAAGGCAGTCAAAGCAGGTGACATAGA...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS-3UTR CAA 90 bp AGTTCAGACCCTGGGTCACTGAAGCTGATAGGAAGAACTGCGATATCAATGGCCCACATGTGCACAGCTTaGAACTTGGCGATCACAGAA +
Preference number: 5 (lower is better)
Translates to: SSDPGSLKLIGRTAISMAHMCTA*NLAITE
Trigger: TTCTGTGATCGCCAAGTTCAAAGCTGTGCACATGTG...GGCCATTGATATCGCAGTTCTTCCTATCAGCTTCAGTGACCCAGGGTCTGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS TCA 90 bp GTCTGTAAAATCAGAACCCTTCAGAGGATTCTTGGAAGGGCTGAATaGGGTCTCATGATGTGTTTAGCAGGGCATGTGTTCAGCACCTGG +
Preference number: 5 (lower is better)
Translates to: VCKIRTLQRILGRAE*GLMMCLAGHVFSTW
Trigger: CCAGGTGCTGAACACATGCCCTGCTAAACACATCATGAGACCTCATTCAGCCCTTCCAAGAATCCTCTGAAGGGTTCTGATTTTACAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR CAA 90 bp AACACCTTGAGCCAATCACTTATCCATGCCAAAGTTGCTTTGTCTGTAAAATCAGCGGTGACCACGAGGTaGAGGAAGATGTGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: NTLSQSLIHAKVALSVKSAVTTR*RKMWQQ
Trigger: CTGCTGCCACATCTTCCTCAACCTCGTGGTCACCGC...TGATTTTACAGACAAAGCAACTTTGGCATGGATAAGTGATTGGCTCAAGGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR CAA 90 bp CAAAGTTGCTTTGTCTGTAAAATCAGAACCCTTCAGAGGATTCTTGGAAGGGCTCCCTTCAGAGGATTCTaGGAAGGGCTGAATGAGGTC +
Preference number: 5 (lower is better)
Translates to: QSCFVCKIRTLQRILGRAPFRGF*EGLNEV
Trigger: GACCTCATTCAGCCCTTCCAAGAATCCTCTGAAGGG...AGCCCTTCCAAGAATCCTCTGAAGGGTTCTGATTTTACAGACAAAGCAACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS-3UTR CAA 90 bp ATTCCTGACTTCTTTAAAAATGGGAGGATATGGCAGGGCCACTTGGCAGCAACCCATGCCAAAGTTGCTTaGTCTGTAAAATCAGAACCC +
Preference number: 5 (lower is better)
Translates to: IPDFFKNGRIWQGHLAATHAKVA*SVKSEP
Trigger: GGGTTCTGATTTTACAGACAAAGCAACTTTGGCATG...GGTTGCTGCCAAGTGGCCCTGCCATATCCTCCCATTTTTAAAGAAGTCAGGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423723.1
CDS GCA 72 bp TGCGGCCCCGAGCGGCGAAGTCTTCTCCCAGCGCGATaGTCCGGGAGCCTCGGGCCGCTGCTCACGCCGCGT +
Preference number: 6 (lower is better)
Translates to: CGPERRSLLPAR*SGSLGPLLTPR
Trigger: ACGCGGCGTGAGCAGCGGCCCGAGGCTCCCGGAGCATCGCGCTGGGAGAAGACTTCGCCGCTCGGGGCCGCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS GCA 72 bp GCTGCCCGCCGGGATCCAGTCGGAGCCGCAGGCGTGTaGCAGGCGGGCTGCCAGCTTCAGTGCAGGGTTGCG +
Preference number: 6 (lower is better)
Translates to: AARRDPVGAAGV*QAGCQLQCRVA
Trigger: CGCAACCCTGCACTGAAGCTGGCAGCCCGCCTGGCACACGCCTGCGGCTCCGACTGGATCCCGGCGGGCAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS GCA 72 bp GGGCTGGGGCTCGAGCGAAGGAGGCAAGGTGCAGACTaGCTCTGGAGAGCGGGCGGCGAGAGGCTGGGGGCC +
Preference number: 6 (lower is better)
Translates to: GLGLERRRQGAD*LWRAGGERLGA
Trigger: GGCCCCCAGCCTCTCGCCGCCCGCTCTCCAGAGGCAGTCTGCACCTTGCCTCCTTCGCTCGAGCCCCAGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS GCA 72 bp TTCTCCCAGCGCGATGCTCCGGGAGCCTCGGGCCGCTaGTCACGCCGCGTTGCCCACTCCTGGCTCCAGGCT +
Preference number: 6 (lower is better)
Translates to: FSQRDAPGASGR*SRRVAHSWLQA
Trigger: AGCCTGGAGCCAGGAGTGGGCAACGCGGCGTGAGCAGCGGCCCGAGGCTCCCGGAGCATCGCGCTGGGAGAA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS CAA 72 bp ATGCTCCGGGAGCCTCGGGCCGCTGCTCACGCCGCGTaGCCCACTCCTGGCTCCAGGCTGCTGCAGCTCCAC +
Preference number: 6 (lower is better)
Translates to: MLREPRAAAHAA*PTPGSRLLQLH
Trigger: GTGGAGCTGCAGCAGCCTGGAGCCAGGAGTGGGCAACGCGGCGTGAGCAGCGGCCCGAGGCTCCCGGAGCAT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS CAA 90 bp AGCCGCACTTCCACGCACGCCAGATTCACCAGCAGGGCCAGGAACTaGCTCCCGGAGCTGCCCGCCGGGATCCAGTCGGAGCCGCAGGCG +
Preference number: 6 (lower is better)
Translates to: SRTSTHARFTSRARN*LPELPAGIQSEPQA
Trigger: CGCCTGCGGCTCCGACTGGATCCCGGCGGGCAGCTCCGGGAGCAAGTTCCTGGCCCTGCTGGTGAATCTGGCGTGCGTGGAAGTGCGGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS GCA 72 bp GATTCACCAGCAGGGCCAGGAACTTGCTCCCGGAGCTaGCCGCCGGGATCCAGTCGGAGCCGCAGGCGTGTG +
Preference number: 6 (lower is better)
Translates to: DSPAGPGTCSRS*PPGSSRSRRRV
Trigger: CACACGCCTGCGGCTCCGACTGGATCCCGGCGGGCAGCTCCGGGAGCAAGTTCCTGGCCCTGCTGGTGAATC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS GCA 72 bp CCACGCACGCCAGATTCACCAGCAGGGCCAGGAACTTaGTCCCGGAGCTGCCCGCCGGGATCCAGTCGGAGC +
Preference number: 6 (lower is better)
Translates to: PRTPDSPAGPGT*SRSCPPGSSRS
Trigger: GCTCCGACTGGATCCCGGCGGGCAGCTCCGGGAGCAAGTTCCTGGCCCTGCTGGTGAATCTGGCGTGCGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS GCA 72 bp AGTCTGGGGGCTGGGGCTCGAGCGAAGGAGGCAAGGTaGAGACTGCCTCTGGAGAGCGGGCGGCGAGAGGCT +
Preference number: 6 (lower is better)
Translates to: SLGAGARAKEAR*RLPLESGRREA
Trigger: AGCCTCTCGCCGCCCGCTCTCCAGAGGCAGTCTGCACCTTGCCTCCTTCGCTCGAGCCCCAGCCCCCAGACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS CCA 72 bp ATGCCCTCATACTCAGGGGACAGGGCTAGCACTGCCTaGTCTGAGCCCGGGGTGGCCCGCGCCACGTGGGAC +
Preference number: 6 (lower is better)
Translates to: MPSYSGDRASTA*SEPGVARATWD
Trigger: GTCCCACGTGGCGCGGGCCACCCCGGGCTCAGACCAGGCAGTGCTAGCCCTGTCCCCTGAGTATGAGGGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS CCA 72 bp GGGCTCGAGCGAAGGAGGCAAGGTGCAGACTGCCTCTaGAGAGCGGGCGGCGAGAGGCTGGGGGCCCAGATT +
Preference number: 6 (lower is better)
Translates to: GLERRRQGADCL*RAGGERLGAQI
Trigger: AATCTGGGCCCCCAGCCTCTCGCCGCCCGCTCTCCAGAGGCAGTCTGCACCTTGCCTCCTTCGCTCGAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS GCA 72 bp GCCAGGCGGGCTGCCAGCTTCAGTGCAGGGTTGCGCTaGCAGGAGCTCAGCTTGCTTCCCAGGATGCGTGCC +
Preference number: 6 (lower is better)
Translates to: ARRAASFSAGLR*QELSLLPRMRA
Trigger: GGCACGCATCCTGGGAAGCAAGCTGAGCTCCTGGCAGCGCAACCCTGCACTGAAGCTGGCAGCCCGCCTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS GCA 72 bp GGGTGCCGCCGTTGCCGCCATCTTGCTTGTGGGTATTaGCCGAGTCTGGGGGCTGGGGCTCGAGCGAAGGAG +
Preference number: 6 (lower is better)
Translates to: GCRRCRHLACGY*PSLGAGARAKE
Trigger: CTCCTTCGCTCGAGCCCCAGCCCCCAGACTCGGGCAATACCCACAAGCAAGATGGCGGCAACGGCGGCACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS GCA 72 bp CCCAACTCCTCTCCTTTCCCTCCCTCGGGTAGAGGCTaGAGCAGCAGCAGCAGCGGCGGCGGCAGCAGCAGA +
Preference number: 6 (lower is better)
Translates to: PNSSPFPPSGRG*SSSSSGGGSSR
Trigger: TCTGCTGCTGCCGCCGCCGCTGCTGCTGCTGCTGCAGCCTCTACCCGAGGGAGGGAAAGGAGAGGAGTTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459931.1
CDS CCA 72 bp TGGCCTCACGGAGGGCTCCCAGGTAGCGCTCCAGGGTaGGGTTTCGGCCCTCTGCCTGGTTCAGAGCTGGCT +
Preference number: 6 (lower is better)
Translates to: WPHGGLPGSAPG*GFGPLPGSELA
Trigger: AGCCAGCTCTGAACCAGGCAGAGGGCCGAAACCCCACCCTGGAGCGCTACCTGGGAGCCCTCCGTGAGGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000437806.1
ENST00000459931.1
CDS CCA 72 bp CAGGCCAGCAGGGCCACACCCAAAGCCCGCAGAACATaGTCAGGGCAGCCATCCGGCGCCTCCTTGGTGGTC +
Preference number: 6 (lower is better)
Translates to: QASRATPKARRT*SGQPSGASLVV
Trigger: GACCACCAAGGAGGCGCCGGATGGCTGCCCTGACCATGTTCTGCGGGCTTTGGGTGTGGCCCTGCTGGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000437806.1
ENST00000459931.1
CDS CCA 72 bp GGGACAGGGCTAGCACTGCCTGGTCTGAGCCCGGGGTaGCCCGCGCCACGTGGGACTGTGATAGGAAGAGGA +
Preference number: 6 (lower is better)
Translates to: GTGLALPGLSPG*PAPRGTVIGRG
Trigger: TCCTCTTCCTATCACAGTCCCACGTGGCGCGGGCCACCCCGGGCTCAGACCAGGCAGTGCTAGCCCTGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS CCA 72 bp ACAGGCACTGCTCCAAGGCAGCCATGCGGTAGTGGCTaGCCGTCTCCTCGCCCGCCTGCAGCCTCATGGCCT +
Preference number: 6 (lower is better)
Translates to: TGTAPRQPCGSG*PSPRPPAASWP
Trigger: AGGCCATGAGGCTGCAGGCGGGCGAGGAGACGGCCAGCCACTACCGCATGGCTGCCTTGGAGCAGTGCCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS CCA 72 bp CCGTCCCGCTACCAGCCTGTGGATGCCGGCAGGGGCTaGAGAAGCAAGAGGGGGTCCCGGATAGTTCCCAGG +
Preference number: 6 (lower is better)
Translates to: PSRYQPVDAGRG*RSKRGSRIVPR
Trigger: CCTGGGAACTATCCGGGACCCCCTCTTGCTTCTCCAGCCCCTGCCGGCATCCACAGGCTGGTAGCGGGACGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459931.1
CDS TCA 72 bp CTGCCTGGTTCAGAGCTGGCTCGCAATCCGAGGCCATaGTGCTCGCCTTGCCCAACAGGCTGCGGCCCCGAG +
Preference number: 6 (lower is better)
Translates to: LPGSELARNPRP*CSPCPTGCGPE
Trigger: CTCGGGGCCGCAGCCTGTTGGGCAAGGCGAGCATCATGGCCTCGGATTGCGAGCCAGCTCTGAACCAGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS GCA 72 bp GCGCTGCCAGGAGCTCAGCTTGCTTCCCAGGATGCGTaGCAGCCCGGCCTGCAGATCCCGGTAGCATTCAGG +
Preference number: 6 (lower is better)
Translates to: ALPGAQLASQDA*QPGLQIPVAFR
Trigger: CCTGAATGCTACCGGGATCTGCAGGCCGGGCTGGCACGCATCCTGGGAAGCAAGCTGAGCTCCTGGCAGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS CCA 72 bp ACTGCCTGGTCTGAGCCCGGGGTGGCCCGCGCCACGTaGGACTGTGATAGGAAGAGGATGGCAGCTGCGAAG +
Preference number: 6 (lower is better)
Translates to: TAWSEPGVARAT*DCDRKRMAAAK
Trigger: CTTCGCAGCTGCCATCCTCTTCCTATCACAGTCCCACGTGGCGCGGGCCACCCCGGGCTCAGACCAGGCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS TCA 72 bp CTGCCTGGTTCAGAGCTGGCTCGCAATCCGAGGCCATaGTGCTCGCCTTGCCCAACTGTCCCGCCGCAGCCA +
Preference number: 6 (lower is better)
Translates to: LPGSELARNPRP*CSPCPTVPPQP
Trigger: TGGCTGCGGCGGGACAGTTGGGCAAGGCGAGCATCATGGCCTCGGATTGCGAGCCAGCTCTGAACCAGGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356090.8
ENST00000373243.7
CDS TCA 72 bp GAAGGGCAGCAGCTGGCACACCTCCTTACGCAAGGATaGGGTCTCCTCGGCCAGCCAGGCACCCAGGATCCG +
Preference number: 6 (lower is better)
Translates to: EGQQLAHLLTQG*GLLGQPGTQDP
Trigger: CGGATCCTGGGTGCCTGGCTGGCCGAGGAGACCTCATCCTTGCGTAAGGAGGTGTGCCAGCTGCTGCCCTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS GCA 72 bp TGGCATAGGGCAGACACGGTGCCACCAGCAATGAGGTaGCGAGGCCCTCTGGGTGTGCCTGCTACAGCCGTC +
Preference number: 6 (lower is better)
Translates to: WHRADTVPPAMR*RGPLGVPATAV
Trigger: GACGGCTGTAGCAGGCACACCCAGAGGGCCTCGGCACCTCATTGCTGGTGGCACCGTGTCTGCCCTATGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000437806.1
ENST00000459931.1
CDS GCA 72 bp GGTTGCGCTGCCAGGAGCTCAGCTTGCTTCCCAGGATaGGTGCCAGCCCGGCCTGCAGATCCCGGTAGCATT +
Preference number: 6 (lower is better)
Translates to: GCAARSSACFPG*VPARPADPGSI
Trigger: AATGCTACCGGGATCTGCAGGCCGGGCTGGCACGCATCCTGGGAAGCAAGCTGAGCTCCTGGCAGCGCAACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS GCA 72 bp GCTTCAGTGCAGGGTTGCGCTGCCAGGAGCTCAGCTTaGTTCCCAGGATGCGTGCCAGCCCGGCCTGCAGAT +
Preference number: 6 (lower is better)
Translates to: ASVQGCAARSSA*FPGCVPARPAD
Trigger: ATCTGCAGGCCGGGCTGGCACGCATCCTGGGAAGCAAGCTGAGCTCCTGGCAGCGCAACCCTGCACTGAAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS CCA 72 bp CAGGGTGGGGTTTCGGCCCTCTGCCTGGTTCAGAGCTaGCTCGCAATCCGAGGCCATGATGCTCGCCTTGCC +
Preference number: 6 (lower is better)
Translates to: QGGVSALCLVQS*LAIRGHDARLA
Trigger: GGCAAGGCGAGCATCATGGCCTCGGATTGCGAGCCAGCTCTGAACCAGGCAGAGGGCCGAAACCCCACCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000437806.1
ENST00000459931.1
CDS CCA 72 bp CGAATCCGCGGCTGCTTCACTCCGGGCTCTGGCCAATaGCAAGTCAGGGTGCTAAGCAGTAGGGGGTGCCGC +
Preference number: 6 (lower is better)
Translates to: RIRGCFTPGSGQ*QVRVLSSRGCR
Trigger: GCGGCACCCCCTACTGCTTAGCACCCTGACTTGCCATTGGCCAGAGCCCGGAGTGAAGCAGCCGCGGATTCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS CCA 72 bp CTCGACAGGGCACGATGGTGTCGCGATATGGCGCGATaGAGTCGCGATAGGGTCCCCGGGGTGTGTCGGCAT +
Preference number: 6 (lower is better)
Translates to: LDRARWCRDMAR*SRDRVPGVCRH
Trigger: ATGCCGACACACCCCGGGGACCCTATCGCGACTCCATCGCGCCATATCGCGACACCATCGTGCCCTGTCGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373243.7
CDS GCA 72 bp TTCCTTCGCTTGTGCGTAGTTTTACCCGCCCAGCACTaGCCCTCCTCCCCCTTGGTCTCGCGGCCGGCATTG +
Preference number: 6 (lower is better)
Translates to: FLRLCVVLPAQH*PSSPLVSRPAL
Trigger: CAATGCCGGCCGCGAGACCAAGGGGGAGGAGGGGCAGTGCTGGGCGGGTAAAACTACGCACAAGCGAAGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS CCA 72 bp CTAGCAGCAGGGCTGCAAACTGCTCGCTGTCATTCTTaGCCTCACGGAGGGCTCCCAGGTAGCGCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: LAAGLQTARCHS*PHGGLPGSAPG
Trigger: CCCTGGAGCGCTACCTGGGAGCCCTCCGTGAGGCCAAGAATGACAGCGAGCAGTTTGCAGCCCTGCTGCTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000437806.1
ENST00000459931.1
CDS CCA 72 bp GGTCATTGGCCTCCTCGGCCTCCTCGTAGAGGGTCTTaGCATAGCGGACGAGGAAGGGCAGCAGCTGGCACA +
Preference number: 6 (lower is better)
Translates to: GHWPPRPPRRGS*HSGRGRAAAGT
Trigger: TGTGCCAGCTGCTGCCCTTCCTCGTCCGCTATGCCAAGACCCTCTACGAGGAGGCCGAGGAGGCCAATGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000423723.1
CDS CAA 72 bp CGCAGAACATGGTCAGGGCAGCCATCCGGCGCCTCCTaGGTGGTCAGGAGACGATTGGGGAAGGTGAAGCCG +
Preference number: 6 (lower is better)
Translates to: RRTWSGQPSGAS*VVRRRLGKVKP
Trigger: CGGCTTCACCTTCCCCAATCGTCTCCTGACCACCAAGGAGGCGCCGGATGGCTGCCCTGACCATGTTCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000437806.1
ENST00000459931.1
CDS CAA 90 bp TGGTCAGGGCAGCCATCCGGCGCCTCCTTGGTGGTCAGGAGACGATaGGGGAAGGTGAAGCCGACAGCATCGAAGATCCGCCGCCGAGTT +
Preference number: 6 (lower is better)
Translates to: WSGQPSGASLVVRRR*GKVKPTASKIRRRV
Trigger: AACTCGGCGGCGGATCTTCGATGCTGTCGGCTTCACCTTCCCCAATCGTCTCCTGACCACCAAGGAGGCGCCGGATGGCTGCCCTGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000437806.1
ENST00000459931.1
CDS CAA 90 bp CCCAAAGCCCGCAGAACATGGTCAGGGCAGCCATCCGGCGCCTCCTaGGTGGTCAGGAGACGATTGGGGAAGGTGAAGCCGACAGCATCG +
Preference number: 6 (lower is better)
Translates to: PKARRTWSGQPSGAS*VVRRRLGKVKPTAS
Trigger: CGATGCTGTCGGCTTCACCTTCCCCAATCGTCTCCTGACCACCAAGGAGGCGCCGGATGGCTGCCCTGACCATGTTCTGCGGGCTTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000437806.1
ENST00000459931.1
CDS CAA 90 bp TGGCGGTCACCACCTGTCCCGCCGCAGCCAGGTCACAACACGACATaGATGAAGTCACGACAGGGCGGCGATGAGATCACACAGGCTGCG +
Preference number: 6 (lower is better)
Translates to: WRSPPVPPQPGHNTT*MKSRQGGDEITQAA
Trigger: CGCAGCCTGTGTGATCTCATCGCCGCCCTGTCGTGACTTCATCAATGTCGTGTTGTGACCTGGCTGCGGCGGGACAGGTGGTGACCGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459931.1
CDS TCA 72 bp ACTTGCTGGCATCCTCAGCTTTCTGGAAATCCTCACTaGGGCCCCGCAACACGGCCAGCAGGTCGGGCTCCG +
Preference number: 6 (lower is better)
Translates to: TCWHPQLSGNPH*GPATRPAGRAP
Trigger: CGGAGCCCGACCTGCTGGCCGTGTTGCGGGGCCTCAGTGAGGATTTCCAGAAAGCTGAGGATGCCAGCAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000437806.1
CDS CCA 72 bp AGCCCCGGTGCGGTGACCACGAGGTTGAGGAAGATGTaGCAGCAGGTCTGCAGGCCAATCTCCACGCTGTCA +
Preference number: 6 (lower is better)
Translates to: SPGAVTTRLRKM*QQVCRPISTLS
Trigger: TGACAGCGTGGAGATTGGCCTGCAGACCTGCTGCCACATCTTCCTCAACCTCGTGGTCACCGCACCGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000423723.1
CDS CCA 72 bp AATGGAGTCTCGACAGGGCACGATGGTGTCGCGATATaGCGCGATGGAGTCGCGATAGGGTCCCCGGGGTGT +
Preference number: 6 (lower is better)
Translates to: NGVSTGHDGVAI*RDGVAIGSPGC
Trigger: ACACCCCGGGGACCCTATCGCGACTCCATCGCGCCATATCGCGACACCATCGTGCCCTGTCGAGACTCCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373243.7
CDS CAA 72 bp CAGCCATCCGGCGCCTCCTTGGTGGTCAGGAGACGATaGGGGAAGGTGAAGCCGACAGCATCGAAGATCCGC +
Preference number: 6 (lower is better)
Translates to: QPSGASLVVRRR*GKVKPTASKIR
Trigger: GCGGATCTTCGATGCTGTCGGCTTCACCTTCCCCAATCGTCTCCTGACCACCAAGGAGGCGCCGGATGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000437806.1
ENST00000459931.1
CDS CAA 90 bp TCGCCTTGCCCAACTGTCCCGCCGCAGCCAGGTCACAACACGACATaGATGAAGTCACGACAGGGCGGCGATGAGATCACACAGGCTGCG +
Preference number: 6 (lower is better)
Translates to: SPCPTVPPQPGHNTT*MKSRQGGDEITQAA
Trigger: CGCAGCCTGTGTGATCTCATCGCCGCCCTGTCGTGACTTCATCAATGTCGTGTTGTGACCTGGCTGCGGCGGGACAGTTGGGCAAGGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356090.8
CDS TCA 72 bp GCGCCTCCTTGGTGGTCAGGAGACGATTGGGGAAGGTaGAGCCGACAGCATCGAAGATCCGCCGCCGAGTTT +
Preference number: 6 (lower is better)
Translates to: APPWWSGDDWGR*SRQHRRSAAEF
Trigger: AAACTCGGCGGCGGATCTTCGATGCTGTCGGCTTCACCTTCCCCAATCGTCTCCTGACCACCAAGGAGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000437806.1
ENST00000459931.1
CDS TCA 72 bp CTGCCTGGTTCAGAGCTGGCTCGCAATCCGAGGCCATaGTGCTCGCCTTGCCCAACTCCTCTCCTTTCCCTC +
Preference number: 6 (lower is better)
Translates to: LPGSELARNPRP*CSPCPTPLLSL
Trigger: GAGGGAAAGGAGAGGAGTTGGGCAAGGCGAGCATCATGGCCTCGGATTGCGAGCCAGCTCTGAACCAGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459931.1
CDS GCA 72 bp ACCGAGGTGTCGTGGCCAGGGGATGTGAGTTCCCACTaGTGCAGGAAATACTTGCACAGAAGCGAGGGGGCC +
Preference number: 6 (lower is better)
Translates to: TEVSWPGDVSSH*CRKYLHRSEGA
Trigger: GGCCCCCTCGCTTCTGTGCAAGTATTTCCTGCAGCAGTGGGAACTCACATCCCCTGGCCACGACACCTCGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000423723.1
CDS GCA 72 bp CAAGTCAGGGTGCTAAGCAGTAGGGGGTGCCGCCGTTaGCGCCATCTTGCTTGTGGGTATTGCCCGAGTCTG +
Preference number: 6 (lower is better)
Translates to: QVRVLSSRGCRR*RHLACGYCPSL
Trigger: CAGACTCGGGCAATACCCACAAGCAAGATGGCGGCAACGGCGGCACCCCCTACTGCTTAGCACCCTGACTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS GCA 72 bp GGCCAATGGCAAGTCAGGGTGCTAAGCAGTAGGGGGTaGCGCCGTTGCCGCCATCTTGCTTGTGGGTATTGC +
Preference number: 6 (lower is better)
Translates to: GQWQVRVLSSRG*RRCRHLACGYC
Trigger: GCAATACCCACAAGCAAGATGGCGGCAACGGCGGCACCCCCTACTGCTTAGCACCCTGACTTGCCATTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373253.7
CDS CCA 72 bp AGATGGCCAGGTTGGCCACCTGCTGGGAAAGGTCATTaGCCTCCTCGGCCTCCTCGTAGAGGGTCTTGGCAT +
Preference number: 6 (lower is better)
Translates to: RWPGWPPAGKGH*PPRPPRRGSWH
Trigger: ATGCCAAGACCCTCTACGAGGAGGCCGAGGAGGCCAATGACCTTTCCCAGCAGGTGGCCAACCTGGCCATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000423723.1
CDS GCA 72 bp TTGACTGCCTTGGTCACTAGCAGCAGGGCTGCAAACTaGTCGCTGTCATTCTTGGCCTCACGGAGGGCTCCC +
Preference number: 6 (lower is better)
Translates to: LTALVTSSRAAN*SLSFLASRRAP
Trigger: GGGAGCCCTCCGTGAGGCCAAGAATGACAGCGAGCAGTTTGCAGCCCTGCTGCTAGTGACCAAGGCAGTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000437806.1
ENST00000459931.1
CDS GCA 72 bp AGATGTGAAGCAGGCGTCACGCTTGATCAGCCCCGGTaGGGTGACCACGAGGTTGAGGAAGATGTGGCAGCA +
Preference number: 6 (lower is better)
Translates to: RCEAGVTLDQPR*GDHEVEEDVAA
Trigger: TGCTGCCACATCTTCCTCAACCTCGTGGTCACCGCACCGGGGCTGATCAAGCGTGACGCCTGCTTCACATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000423723.1
CDS CAA 72 bp CCCCGGGCTGTGAGGAAGGTGCTAAGAATGGGAATCTaGTTCAGGACTTGGGGATGGGCGGCCAGTTCAGGG +
Preference number: 6 (lower is better)
Translates to: PRAVRKVLRMGI*FRTWGWAASSG
Trigger: CCCTGAACTGGCCGCCCATCCCCAAGTCCTGAACAAGATTCCCATTCTTAGCACCTTCCTCACAGCCCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000437806.1
ENST00000459931.1
CDS CAA 90 bp CCGGGCTGTGAGGAAGGTGCTAAGAATGGGAATCTTGTTCAGGACTaGGGGATGGGCGGCCAGTTCAGGGTCACTGCAGAAGCAGGCCAG +
Preference number: 6 (lower is better)
Translates to: PGCEEGAKNGNLVQD*GMGGQFRVTAEAGQ
Trigger: CTGGCCTGCTTCTGCAGTGACCCTGAACTGGCCGCCCATCCCCAAGTCCTGAACAAGATTCCCATTCTTAGCACCTTCCTCACAGCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000437806.1
ENST00000459931.1
CDS CAA 90 bp TCGCCTTGCCCAACTGTCCCGCCGCAGCCAGGTCACAACACGACATaGATGAAGTCACGACAGGGCGGCGATGAGATCACACTTCACGAT +
Preference number: 6 (lower is better)
Translates to: SPCPTVPPQPGHNTT*MKSRQGGDEITLHD
Trigger: ATCGTGAAGTGTGATCTCATCGCCGCCCTGTCGTGACTTCATCAATGTCGTGTTGTGACCTGGCTGCGGCGGGACAGTTGGGCAAGGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373243.7
CDS GCA 72 bp GTGGCCACATTAGCAGCCAGAAGCAGCCTTCCCTGTTaGTGCACTAGTGCTGGTAGCGACGTCATGAGGGTG +
Preference number: 6 (lower is better)
Translates to: VATLAARSSLPC*CTSAGSDVMRV
Trigger: CACCCTCATGACGTCGCTACCAGCACTAGTGCAGCAACAGGGAAGGCTGCTTCTGGCTGCTAATGTGGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000423723.1
CDS CCA 72 bp TGGCAGAGCTCAAACTTGCTGGCATCCTCAGCTTTCTaGAAATCCTCACTGAGGCCCCGCAACACGGCCAGC +
Preference number: 6 (lower is better)
Translates to: WQSSNLLASSAF*KSSLRPRNTAS
Trigger: GCTGGCCGTGTTGCGGGGCCTCAGTGAGGATTTCCAGAAAGCTGAGGATGCCAGCAAGTTTGAGCTCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000437806.1
CDS CCA 72 bp AGGGCTGTGACAAAATGGAGTCTCGACAGGGCACGATaGTGTCGCGATATGGCGCGATGGAGTCGCGATAGG +
Preference number: 6 (lower is better)
Translates to: RAVTKWSLDRAR*CRDMARWSRDR
Trigger: CCTATCGCGACTCCATCGCGCCATATCGCGACACCATCGTGCCCTGTCGAGACTCCATTTTGTCACAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373243.7
CDS CAA 72 bp CCAACTGTCCCGCCGCAGCCAGGTCACAACACGACATaGATGAAGTCACGACAGGGCGGCGATGAGATCACA +
Preference number: 6 (lower is better)
Translates to: PTVPPQPGHNTT*MKSRQGGDEIT
Trigger: TGTGATCTCATCGCCGCCCTGTCGTGACTTCATCAATGTCGTGTTGTGACCTGGCTGCGGCGGGACAGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356090.8
ENST00000373243.7
CDS TCA 72 bp GCTCACAGCGAGTGCATTCCTGGATCCCCAACTCCATaGGGGCATAGCAGGCGGTCACCACATCCTCTTTCA +
Preference number: 6 (lower is better)
Translates to: AHSECIPGSPTP*GHSRRSPHPLS
Trigger: TGAAAGAGGATGTGGTGACCGCCTGCTATGCCCTCATGGAGTTGGGGATCCAGGAATGCACTCGCTGTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS TCA 72 bp GCTCACGAGCTGCACCTTCTGTGGCTCCTTAAGCAGTaGCTGCTCACAGCGAGTGCATTCCTGGATCCCCAA +
Preference number: 6 (lower is better)
Translates to: AHELHLLWLLKQ*LLTASAFLDPQ
Trigger: TTGGGGATCCAGGAATGCACTCGCTGTGAGCAGTCACTGCTTAAGGAGCCACAGAAGGTGCAGCTCGTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS TCA 72 bp TGTCAGGCAGCACCGAGGTGTCGTGGCCAGGGGATGTaGGTTCCCACTGCTGCAGGAAATACTTGCACAGAA +
Preference number: 6 (lower is better)
Translates to: CQAAPRCRGQGM*VPTAAGNTCTE
Trigger: TTCTGTGCAAGTATTTCCTGCAGCAGTGGGAACTCACATCCCCTGGCCACGACACCTCGGTGCTGCCTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000423723.1
CDS GCA 72 bp ACGAGCTGCACCTTCTGTGGCTCCTTAAGCAGTGACTaGTCACAGCGAGTGCATTCCTGGATCCCCAACTCC +
Preference number: 6 (lower is better)
Translates to: TSCTFCGSLSSD*SQRVHSWIPNS
Trigger: GGAGTTGGGGATCCAGGAATGCACTCGCTGTGAGCAGTCACTGCTTAAGGAGCCACAGAAGGTGCAGCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
CDS CAA 90 bp TTGGGGAAGGTGAAGCCGACAGCATCGAAGATCCGCCGCCGAGTTTaGGCATCTATGTCACCTGCTTTGACTGCCTTGGTCACTAGCAGC +
Preference number: 6 (lower is better)
Translates to: LGKVKPTASKIRRRV*ASMSPALTALVTSS
Trigger: GCTGCTAGTGACCAAGGCAGTCAAAGCAGGTGACATAGATGCCAAAACTCGGCGGCGGATCTTCGATGCTGTCGGCTTCACCTTCCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000437806.1
ENST00000459931.1
CDS TCA 72 bp TCCGCCGCCGAGTTTTGGCATCTATGTCACCTGCTTTaGCTGCCTTGGTCACTAGCAGCAGGGCTGCAAACT +
Preference number: 6 (lower is better)
Translates to: SAAEFWHLCHLL*LPWSLAAGLQT
Trigger: AGTTTGCAGCCCTGCTGCTAGTGACCAAGGCAGTCAAAGCAGGTGACATAGATGCCAAAACTCGGCGGCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000437806.1
ENST00000459931.1
CDS TCA 72 bp CAACACGACATTGATGAAGTCACGACAGGGCGGCGATaGGATCACACTTCACGATGGCGCGGTGATGTCACG +
Preference number: 6 (lower is better)
Translates to: QHDIDEVTTGRR*DHTSRWRGDVT
Trigger: CGTGACATCACCGCGCCATCGTGAAGTGTGATCTCATCGCCGCCCTGTCGTGACTTCATCAATGTCGTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373243.7
CDS CAA 72 bp GTGAAGCCGACAGCATCGAAGATCCGCCGCCGAGTTTaGGCATCTATGTCACCTGCTTTGACTGCCTTGGTC +
Preference number: 6 (lower is better)
Translates to: VKPTASKIRRRV*ASMSPALTALV
Trigger: GACCAAGGCAGTCAAAGCAGGTGACATAGATGCCAAAACTCGGCGGCGGATCTTCGATGCTGTCGGCTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356090.8
ENST00000373243.7
ENST00000373253.7
ENST00000437806.1
ENST00000459931.1
CDS TCA 72 bp AGGGCGGCGATGAGATCACACTTCACGATGGCGCGGTaGTGTCACGGAGAGATCACGTCAAAATCACGACAT +
Preference number: 6 (lower is better)
Translates to: RAAMRSHFTMAR*CHGEITSKSRH
Trigger: ATGTCGTGATTTTGACGTGATCTCTCCGTGACATCACCGCGCCATCGTGAAGTGTGATCTCATCGCCGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373243.7
CDS TCA 72 bp CCCAAATGGGTGAAGTTCGATTATCCGGACTCAGGCTaGCATGGGAGAAAAGGACACCCCAGGCTTCCTTTC +
Preference number: 6 (lower is better)
Translates to: PKWVKFDYPDSG*HGRKGHPRLPF
Trigger: GAAAGGAAGCCTGGGGTGTCCTTTTCTCCCATGTCAGCCTGAGTCCGGATAATCGAACTTCACCCATTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437806.1
CDS TCA 72 bp CCTCCCTTCTTCAGAGGCAGAGATACGCTTCAGAAGTaGGAATACAAGACGCTCAACAGGGAAGGCTTGGAG +
Preference number: 6 (lower is better)
Translates to: PPFFRGRDTLQK*EYKTLNREGLE
Trigger: CTCCAAGCCTTCCCTGTTGAGCGTCTTGTATTCTCACTTCTGAAGCGTATCTCTGCCTCTGAAGAAGGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437806.1