RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NCBP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000074356

Ensembl transcript IDs: ENST00000389005.6, ENST00000572988.1, ENST00000574379.2, ENST00000574911.5, ENST00000575815.5, ENST00000577169.1

Found 701 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGCAGGAGCGAGAGGGCGCCAGCTCCTGCGGGGGAGGTTCCTACTaGGCGCCCCACCCTGTGCAAGAATGTCAGGCTTTAGGGCAGCTG +
Preference number: 1 (lower is better)
Translates to: EQEREGASSCGGGSY*APHPVQECQALGQL
Trigger: CAGCTGCCCTAAAGCCTGACATTCTTGCACAGGGTGGGGCGCGCAGTAGGAACCTCCCCCGCAGGAGCTGGCGCCCTCTCGCTCCTGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR GCA 90 bp GAGCTGCTGGCACTGGATCGTCTAGACGCGCTCCGCTCCCGGGGCTaGTTGAGAGCCGGGAGCTCCTCGTGGTACTCTACCACCACTCTG +
Preference number: 1 (lower is better)
Translates to: ELLALDRLDALRSRG*LRAGSSSWYSTTTL
Trigger: CAGAGTGGTGGTAGAGTACCACGAGGAGCTCCCGGCTCTCAAGCAGCCCCGGGAGCGGAGCGCGTCTAGACGATCCAGTGCCAGCAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR CCA 90 bp GACGCGCTCCGCTCCCGGGGCTGCTTGAGAGCCGGGAGCTCCTCGTaGTACTCTACCACCACTCTGTCATCTGCATCCATGTCCTGGTCT +
Preference number: 1 (lower is better)
Translates to: DALRSRGCLRAGSSS*YSTTTLSSASMSWS
Trigger: AGACCAGGACATGGATGCAGATGACAGAGTGGTGGTAGAGTACCACGAGGAGCTCCCGGCTCTCAAGCAGCCCCGGGAGCGGAGCGCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR GCA 90 bp CACCTCATGCGCGCCCTCAGTTGTCTCCCTGGCGCCTCCTCCACCTaGAGTAGAAATTCATGCTGGCGAGCCCACTGCCGTCACAGCTTG +
Preference number: 1 (lower is better)
Translates to: HLMRALSCLPGASST*SRNSCWRAHCRHSL
Trigger: CAAGCTGTGACGGCAGTGGGCTCGCCAGCATGAATTTCTACTGCAGGTGGAGGAGGCGCCAGGGAGACAACTGAGGGCGCGCATGAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 90 bp GCAAGAGGGTGCTCACCATGTTGGCATCCTCCGGCCTCAGATCTGTaGGGGACTGCGGGGGTGATGGGACAGGGAGAGAACAAGGAGTGG +
Preference number: 1 (lower is better)
Translates to: ARGCSPCWHPPASDL*GTAGVMGQGENKEW
Trigger: CCACTCCTTGTTCTCTCCCTGTCCCATCACCCCCGCAGTCCCCCACAGATCTGAGGCCGGAGGATGCCAACATGGTGAGCACCCTCTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR TCA 90 bp TCAATGCTGCAGCTCTTATCTACCTGGGCGGCACTGGTGCACCTCTaGGGTCAGGTCCGTGAGATTCGCCCCACACTAGGGTCCCGGAAG +
Preference number: 1 (lower is better)
Translates to: SMLQLLSTWAALVHL*GQVREIRPTLGSRK
Trigger: CTTCCGGGACCCTAGTGTGGGGCGAATCTCACGGACCTGACCTCAGAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTGCAGCATTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR GCA 90 bp GAACGTCAGGGTGCCTCGGGAAGCCAGGGAAAGCTGATGACTGGGTaGTGGACAGGGAGCAGGGCCACTTCTGTACCTCTGCACACTTCT +
Preference number: 1 (lower is better)
Translates to: ERQGASGSQGKLMTG*WTGSRATSVPLHTS
Trigger: AGAAGTGTGCAGAGGTACAGAAGTGGCCCTGCTCCCTGTCCAGCACCCAGTCATCAGCTTTCCCTGGCTTCCCGAGGCACCCTGACGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 90 bp CCCTCACTTCATTCTGCGCTCCAAGGGCACTGGGGAGAGTCACAGTaGTCTCCTCTCCCCCGCATTGGCCTAAAGCAGGAAGAGAGCAGC +
Preference number: 1 (lower is better)
Translates to: PSLHSALQGHWGESQ*SPLPRIGLKQEESS
Trigger: GCTGCTCTCTTCCTGCTTTAGGCCAATGCGGGGGAGAGGAGACCACTGTGACTCTCCCCAGTGCCCTTGGAGCGCAGAATGAAGTGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 90 bp TTCTTGTCCTTTCTAAGGAAGGGGCTGGGAGGGCGAGGGCTGCACTaGGTGCTGGGACCAAGGGTCCAGGGGCTTGGATCTCTTGTTTAC +
Preference number: 1 (lower is better)
Translates to: FLSFLRKGLGGRGLH*VLGPRVQGLGSLVY
Trigger: GTAAACAAGAGATCCAAGCCCCTGGACCCTTGGTCCCAGCACCCAGTGCAGCCCTCGCCCTCCCAGCCCCTTCCTTAGAAAGGACAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR TCA 90 bp CCAGGAATTCTGGTAACAGCCCACTCAACTGCTAGACGGGAAAACTaGGGCCCAGGTCCATGGAGCAGAGCCAGGGGTTGGCATCCAGGT +
Preference number: 1 (lower is better)
Translates to: PGILVTAHSTARREN*GPGPWSRARGWHPG
Trigger: ACCTGGATGCCAACCCCTGGCTCTGCTCCATGGACCTGGGCCTCAGTTTTCCCGTCTAGCAGTTGAGTGGGCTGTTACCAGAATTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR GCA 90 bp TGCCATGAGCAATCCCCGAGGGAAGAACGGAAGCACAGTCAATGCTaGAGCTCTTATCTACCTGGGCGGCACTGGTGCACCTCTGAGGTC +
Preference number: 1 (lower is better)
Translates to: CHEQSPREERKHSQC*SSYLPGRHWCTSEV
Trigger: GACCTCAGAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTGCAGCATTGACTGTGCTTCCGTTCTTCCCTCGGGGATTGCTCATGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR GCA 90 bp CCATGCCATGAGCAATCCCCGAGGGAAGAACGGAAGCACAGTCAATaGTGCAGCTCTTATCTACCTGGGCGGCACTGGTGCACCTCTGAG +
Preference number: 1 (lower is better)
Translates to: PCHEQSPREERKHSQ*CSSYLPGRHWCTSE
Trigger: CTCAGAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTGCAGCATTGACTGTGCTTCCGTTCTTCCCTCGGGGATTGCTCATGGCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR GCA 90 bp CCCTGCAGAGGCATGCCAGCTGGGACGCTGACCACAAGACATCTTTaGCCCGTCAGTAGAAGCAGAGACTGTGCTGGGATGGGAATAAGC +
Preference number: 1 (lower is better)
Translates to: PCRGMPAGTLTTRHL*PVSRSRDCAGMGIS
Trigger: GCTTATTCCCATCCCAGCACAGTCTCTGCTTCTACTGACGGGGCAAAGATGTCTTGTGGTCAGCGTCCCAGCTGGCATGCCTCTGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR TCA 90 bp CCCACAAACCCAAACTACATCCCCAAGGTCAGGGCCAGGCTCTGTTaGGTAATGCTCCCCATCACAGCACGCAGCACAAGGCTGGCTGTT +
Preference number: 1 (lower is better)
Translates to: PTNPNYIPKVRARLC*VMLPITARSTRLAV
Trigger: AACAGCCAGCCTTGTGCTGCGTGCTGTGATGGGGAGCATTACTCAACAGAGCCTGGCCCTGACCTTGGGGATGTAGTTTGGGTTTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 90 bp AGGGCGAGGGCTGCACTGGGTGCTGGGACCAAGGGTCCAGGGGCTTaGATCTCTTGTTTACAAACCCCTACTTCTTTCCTGCTATCTAGC +
Preference number: 1 (lower is better)
Translates to: RARAALGAGTKGPGA*ISCLQTPTSFLLSS
Trigger: GCTAGATAGCAGGAAAGAAGTAGGGGTTTGTAAACAAGAGATCCAAGCCCCTGGACCCTTGGTCCCAGCACCCAGTGCAGCCCTCGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR TCA 90 bp TGGCGAGCCCACTGCCGTCACAGCTTGGGAAGAGTAAACCGCCACTaGGATGCACCAACAAAGCCAGGAATTCTGGTAACAGCCCACTCA +
Preference number: 1 (lower is better)
Translates to: WRAHCRHSLGRVNRH*DAPTKPGILVTAHS
Trigger: TGAGTGGGCTGTTACCAGAATTCCTGGCTTTGTTGGTGCATCTCAGTGGCGGTTTACTCTTCCCAAGCTGTGACGGCAGTGGGCTCGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR GCA 90 bp GTGCCCACATGTGTGGGGAGTGTCCAGGGTAAAATCACGCCCAGCTaGCTGCCACGGGCCTGTCCTGACTATCCATTCTTACTCTTAAAC +
Preference number: 1 (lower is better)
Translates to: VPTCVGSVQGKITPS*LPRACPDYPFLLLN
Trigger: GTTTAAGAGTAAGAATGGATAGTCAGGACAGGCCCGTGGCAGGCAGCTGGGCGTGATTTTACCCTGGACACTCCCCACACATGTGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR GCA 90 bp GTGCAGGCACCAAGAAAAGCCTACGTGAATAAGACAGCAAGAGGGTaGTCACCATGTTGGCATCCTCCGGCCTCAGATCTGTGGGGGACT +
Preference number: 1 (lower is better)
Translates to: VQAPRKAYVNKTARG*SPCWHPPASDLWGT
Trigger: AGTCCCCCACAGATCTGAGGCCGGAGGATGCCAACATGGTGAGCACCCTCTTGCTGTCTTATTCACGTAGGCTTTTCTTGGTGCCTGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 90 bp GACTGCTCTCACTTTCCTCACCGACAGGACCACAGGCTTAAGAACTaGCTCAGCAGTCCTTCTTTAGGGTCTAGCGCCTGCCTACCAGCT +
Preference number: 1 (lower is better)
Translates to: DCSHFPHRQDHRLKN*LSSPSLGSSACLPA
Trigger: AGCTGGTAGGCAGGCGCTAGACCCTAAAGAAGGACTGCTGAGCCAGTTCTTAAGCCTGTGGTCCTGTCGGTGAGGAAAGTGAGAGCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR TCA 90 bp CCAGGCTGCACTGTGTGCACAACAGCCCAGGCAGGTGAAGAGTCGTaGCATCGCAAAAAGGACCACGGTTTATTACCATCTCTAACGCCC +
Preference number: 1 (lower is better)
Translates to: PGCTVCTTAQAGEES*HRKKDHGLLPSLTP
Trigger: GGGCGTTAGAGATGGTAATAAACCGTGGTCCTTTTTGCGATGTCACGACTCTTCACCTGCCTGGGCTGTTGTGCACACAGTGCAGCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR TCA 90 bp GGTGGCCTTACAAGAGCCATGTGCAGGCACCAAGAAAAGCCTACGTaGATAAGACAGCAAGAGGGTGCTCACCATGTTGGCATCCTCCGG +
Preference number: 1 (lower is better)
Translates to: GGLTRAMCRHQEKPT*IRQQEGAHHVGILR
Trigger: CCGGAGGATGCCAACATGGTGAGCACCCTCTTGCTGTCTTATTCACGTAGGCTTTTCTTGGTGCCTGCACATGGCTCTTGTAAGGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR GCA 90 bp AGCCCACTGCCGTCACAGCTTGGGAAGAGTAAACCGCCACTGAGATaGACCAACAAAGCCAGGAATTCTGGTAACAGCCCACTCAACTGC +
Preference number: 1 (lower is better)
Translates to: SPLPSQLGKSKPPLR*TNKARNSGNSPLNC
Trigger: GCAGTTGAGTGGGCTGTTACCAGAATTCCTGGCTTTGTTGGTGCATCTCAGTGGCGGTTTACTCTTCCCAAGCTGTGACGGCAGTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR GCA 90 bp TGGCAGGCACAGGGGAAAGCCCACTCAACAAGCAGACACGGTCCCTaGTCTCACGGAGCTTACAGTCTAGCAAGACAAACTAGGAACAAG +
Preference number: 1 (lower is better)
Translates to: WQAQGKAHSTSRHGP*SHGAYSLARQTRNK
Trigger: CTTGTTCCTAGTTTGTCTTGCTAGACTGTAAGCTCCGTGAGAGCAGGGACCGTGTCTGCTTGTTGAGTGGGCTTTCCCCTGTGCCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 90 bp TCTGGAGGGCTGCCTTTTTCTCAAAGGGTAAAGCCTGTGGGGTGGTaGGAAAGGAATCGAGGGCCCAGAACTACAACTCTGCAGCGAAAG +
Preference number: 1 (lower is better)
Translates to: SGGLPFSQRVKPVGW*ERNRGPRTTTLQRK
Trigger: CTTTCGCTGCAGAGTTGTAGTTCTGGGCCCTCGATTCCTTTCCCACCACCCCACAGGCTTTACCCTTTGAGAAAAAGGCAGCCCTCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR TCA 90 bp CTTGATCTTCACATCAAGCTGACAGCACGTAAGAGGCCCATGCCATaGGCAATCCCCGAGGGAAGAACGGAAGCACAGTCAATGCTGCAG +
Preference number: 1 (lower is better)
Translates to: LDLHIKLTARKRPMP*AIPEGRTEAQSMLQ
Trigger: CTGCAGCATTGACTGTGCTTCCGTTCTTCCCTCGGGGATTGCTCATGGCATGGGCCTCTTACGTGCTGTCAGCTTGATGTGAAGATCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR TCA 90 bp TCGACAGGATCCAGGCTGCACTGTGTGCACAACAGCCCAGGCAGGTaGAGAGTCGTGACATCGCAAAAAGGACCACGGTTTATTACCATC +
Preference number: 1 (lower is better)
Translates to: STGSRLHCVHNSPGR*RVVTSQKGPRFITI
Trigger: GATGGTAATAAACCGTGGTCCTTTTTGCGATGTCACGACTCTTCACCTGCCTGGGCTGTTGTGCACACAGTGCAGCCTGGATCCTGTCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR TCA 90 bp AAGGAGCATATTCTAAACCCTGCAGAGGCATGCCAGCTGGGACGCTaGCCACAAGACATCTTTGCCCCGTCAGTAGAAGCAGAGACTGTG +
Preference number: 1 (lower is better)
Translates to: KEHILNPAEACQLGR*PQDIFAPSVEAETV
Trigger: CACAGTCTCTGCTTCTACTGACGGGGCAAAGATGTCTTGTGGTCAGCGTCCCAGCTGGCATGCCTCTGCAGGGTTTAGAATATGCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR GCA 90 bp ACAAACTCATCCCATCTTTACAGAAGACCTGCTAGATGCCAGGCATaGTGGCAGGCACAGGGGAAAGCCCACTCAACAAGCAGACACGGT +
Preference number: 1 (lower is better)
Translates to: TNSSHLYRRPARCQA*WQAQGKAHSTSRHG
Trigger: ACCGTGTCTGCTTGTTGAGTGGGCTTTCCCCTGTGCCTGCCAGCATGCCTGGCATCTAGCAGGTCTTCTGTAAAGATGGGATGAGTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR GCA 90 bp GGAGGGTTTACAAACTCATCCCATCTTTACAGAAGACCTGCTAGATaGCAGGCATGCTGGCAGGCACAGGGGAAAGCCCACTCAACAAGC +
Preference number: 1 (lower is better)
Translates to: GGFTNSSHLYRRPAR*QACWQAQGKAHSTS
Trigger: GCTTGTTGAGTGGGCTTTCCCCTGTGCCTGCCAGCATGCCTGGCATCTAGCAGGTCTTCTGTAAAGATGGGATGAGTTTGTAAACCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR GCA 90 bp TTGACTTTCCCCAACAGGCATTCTACCTCAGCTAAAGATGCTGCCTaGCTCTCACAGGCCCTGAGGAGAAGATGGCCACATCACAGGATC +
Preference number: 1 (lower is better)
Translates to: LTFPNRHSTSAKDAA*LSQALRRRWPHHRI
Trigger: GATCCTGTGATGTGGCCATCTTCTCCTCAGGGCCTGTGAGAGGCAGGCAGCATCTTTAGCTGAGGTAGAATGCCTGTTGGGGAAAGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 90 bp AAATCTGGAGGGCTGCCTTTTTCTCAAAGGGTAAAGCCTGTGGGGTaGTGGGAAAGGAATCGAGGGCCCAGAACTACAACTCTGCAGCGA +
Preference number: 1 (lower is better)
Translates to: KSGGLPFSQRVKPVG*WERNRGPRTTTLQR
Trigger: TCGCTGCAGAGTTGTAGTTCTGGGCCCTCGATTCCTTTCCCACCACCCCACAGGCTTTACCCTTTGAGAAAAAGGCAGCCCTCCAGATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR CCA 90 bp AGGATGCTGCCTCTGAGAGGCCACATAGCTAGTAAGGAGCAGAGCTaGGACTCCAAACAGGCCTGTTTCCTCCAGAATCAGGACTCTGAA +
Preference number: 1 (lower is better)
Translates to: RMLPLRGHIASKEQS*DSKQACFLQNQDSE
Trigger: TTCAGAGTCCTGATTCTGGAGGAAACAGGCCTGTTTGGAGTCCCAGCTCTGCTCCTTACTAGCTATGTGGCCTCTCAGAGGCAGCATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 90 bp TCCTCGTGGTACTCTACCACCACTCTGTCATCTGCATCCATGTCCTaGTCTTCTTCTTCCTCTTCCTCTTCCTCCTCCTCCTCCTCTTCC +
Preference number: 1 (lower is better)
Translates to: SSWYSTTTLSSASMS*SSSSSSSSSSSSSS
Trigger: GGAAGAGGAGGAGGAGGAGGAAGAGGAAGAGGAAGAAGAAGACCAGGACATGGATGCAGATGACAGAGTGGTGGTAGAGTACCACGAGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR GCA 90 bp AGGCTTAAGAACTGGCTCAGCAGTCCTTCTTTAGGGTCTAGCGCCTaGCTACCAGCTTCCTCTACTTCTATCCCGGGACAGATGAATGCT +
Preference number: 1 (lower is better)
Translates to: RLKNWLSSPSLGSSA*LPASSTSIPGQMNA
Trigger: AGCATTCATCTGTCCCGGGATAGAAGTAGAGGAAGCTGGTAGGCAGGCGCTAGACCCTAAAGAAGGACTGCTGAGCCAGTTCTTAAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR GCA 90 bp GAGGAATGCTGCTTTAGGCAAAAGAGCCACTGGAGGAATGAGCTCTaGTCTTTTCACCTGCTCTGGACTGCTCTCACTTTCCTCACCGAC +
Preference number: 1 (lower is better)
Translates to: EECCFRQKSHWRNEL*SFHLLWTALTFLTD
Trigger: GTCGGTGAGGAAAGTGAGAGCAGTCCAGAGCAGGTGAAAAGAGCAGAGCTCATTCCTCCAGTGGCTCTTTTGCCTAAAGCAGCATTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 90 bp ATTTCTTCTCCCGAGTATCGGCGTAGAGGCCTTTACTATCCTGCCTaGGAACACCTAGCCTACTATGCACATCAGAAGAGGGCTCTCTCC +
Preference number: 1 (lower is better)
Translates to: ISSPEYRRRGLYYPA*EHLAYYAHQKRALS
Trigger: GGAGAGAGCCCTCTTCTGATGTGCATAGTAGGCTAGGTGTTCCCAGGCAGGATAGTAAAGGCCTCTACGCCGATACTCGGGAGAAGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR GCA 90 bp GGACAGGGAGCAGGGCCACTTCTGTACCTCTGCACACTTCTAGAATaGGGACTCATCCTGCATCCATCCAGTATGTATTTATCCAAGCGT +
Preference number: 1 (lower is better)
Translates to: GQGAGPLLYLCTLLE*GLILHPSSMYLSKR
Trigger: ACGCTTGGATAAATACATACTGGATGGATGCAGGATGAGTCCGCATTCTAGAAGTGTGCAGAGGTACAGAAGTGGCCCTGCTCCCTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 90 bp GTGGAGATGTGGAGAAACTGGAACCCTCGCACACTGCTGGTGGAATaGAAAATGATACAGCTGCTTGGAAAAACCACCTGGTGGTTCCTG +
Preference number: 1 (lower is better)
Translates to: VEMWRNWNPRTLLVE*KMIQLLGKTTWWFL
Trigger: CAGGAACCACCAGGTGGTTTTTCCAAGCAGCTGTATCATTTTCCATTCCACCAGCAGTGTGCGAGGGTTCCAGTTTCTCCACATCTCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR TCA 90 bp GTTCCTAAAAATCCCACAGCACTGAACTTGATCTTCACATCAAGCTaGCAGCACGTAAGAGGCCCATGCCATGAGCAATCCCCGAGGGAA +
Preference number: 1 (lower is better)
Translates to: VPKNPTALNLIFTSS*QHVRGPCHEQSPRE
Trigger: TTCCCTCGGGGATTGCTCATGGCATGGGCCTCTTACGTGCTGTCAGCTTGATGTGAAGATCAAGTTCAGTGCTGTGGGATTTTTAGGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR TCA 90 bp AGCAGGAGACTGCTGAGTGCTGAAAGGCCGTGGAACAAATGGACCTaGGCTGCTGGTGTAAAACCAAAAGGAAAGTCTGTGAAGGAGCAT +
Preference number: 1 (lower is better)
Translates to: SRRLLSAERPWNKWT*AAGVKPKGKSVKEH
Trigger: ATGCTCCTTCACAGACTTTCCTTTTGGTTTTACACCAGCAGCTCAGGTCCATTTGTTCCACGGCCTTTCAGCACTCAGCAGTCTCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR GCA 90 bp AGAAGCCTGGGCGGAAGCATGTCACTGGAGGTAGAAACAGCTCTGTaGACAGTCTGTAGGGCTAGTGAGATCAAGATACATTTAGGGAAC +
Preference number: 1 (lower is better)
Translates to: RSLGGSMSLEVETAL*TVCRASEIKIHLGN
Trigger: GTTCCCTAAATGTATCTTGATCTCACTAGCCCTACAGACTGTGCACAGAGCTGTTTCTACCTCCAGTGACATGCTTCCGCCCAGGCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 90 bp TCGAGTGAGAAGTTTGAGGAATGCTGCTTTAGGCAAAAGAGCCACTaGAGGAATGAGCTCTGCTCTTTTCACCTGCTCTGGACTGCTCTC +
Preference number: 1 (lower is better)
Translates to: SSEKFEECCFRQKSH*RNELCSFHLLWTAL
Trigger: GAGAGCAGTCCAGAGCAGGTGAAAAGAGCAGAGCTCATTCCTCCAGTGGCTCTTTTGCCTAAAGCAGCATTCCTCAAACTTCTCACTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 90 bp CAGCGCCAGGCGCCCTGTGATCCACTTTCTTCGTATTCTTTTCTTTaGTCTTGGGTGCAGATCCTAGGCGAGTCCATAAATTACCTGATT +
Preference number: 1 (lower is better)
Translates to: QRQAPCDPLSSYSFL*SWVQILGESINYLI
Trigger: AATCAGGTAATTTATGGACTCGCCTAGGATCTGCACCCAAGACCAAAGAAAAGAATACGAAGAAAGTGGATCACAGGGCGCCTGGCGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR CCA 90 bp GACTCTGCCTCTGAACCAGAGCTGCTTTCCCGACTAACTTCAATCTaGAGAGATGGTAAGTTATCTAACCGGCTCTTCTTTTGGCGAGAC +
Preference number: 1 (lower is better)
Translates to: DSASEPELLSRLTSI*RDGKLSNRLFFWRD
Trigger: GTCTCGCCAAAAGAAGAGCCGGTTAGATAACTTACCATCTCTCCAGATTGAAGTTAGTCGGGAAAGCAGCTCTGGTTCAGAGGCAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR TCA 90 bp CTCATCATTCAGGACACACTCAAGATGTTGCAAGATCTGAGTGACTaGGAGTGGGCAGGAGGGTTAGAGAAACTAATAAGGCCAGTAACT +
Preference number: 1 (lower is better)
Translates to: LIIQDTLKMLQDLSD*EWAGGLEKLIRPVT
Trigger: AGTTACTGGCCTTATTAGTTTCTCTAACCCTCCTGCCCACTCTCAGTCACTCAGATCTTGCAACATCTTGAGTGTGTCCTGAATGATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR TCA 90 bp ATATCTGATTTAGTACTGCTGACTGGTGGCCGTGGACGGGAGTGCTaGCGTTTCTCATCTAATAGATGTCGGACATCTGCAAATTTCTCA +
Preference number: 1 (lower is better)
Translates to: ISDLVLLTGGRGREC*RFSSNRCRTSANFS
Trigger: TGAGAAATTTGCAGATGTCCGACATCTATTAGATGAGAAACGTCAGCACTCCCGTCCACGGCCACCAGTCAGCAGTACTAAATCAGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR CCA 90 bp ACTACAATGAGATACCACTTCACACCAGAAAATAATGAGTGTTGGTaGAGATGTGGAGAAACTGGAACCCTCGCACACTGCTGGTGGAAT +
Preference number: 1 (lower is better)
Translates to: TTMRYHFTPENNECW*RCGETGTLAHCWWN
Trigger: ATTCCACCAGCAGTGTGCGAGGGTTCCAGTTTCTCCACATCTCCACCAACACTCATTATTTTCTGGTGTGAAGTGGTATCTCATTGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 90 bp AAAACTACAATGAGATACCACTTCACACCAGAAAATAATGAGTGTTaGTGGAGATGTGGAGAAACTGGAACCCTCGCACACTGCTGGTGG +
Preference number: 1 (lower is better)
Translates to: KTTMRYHFTPENNEC*WRCGETGTLAHCWW
Trigger: CCACCAGCAGTGTGCGAGGGTTCCAGTTTCTCCACATCTCCACCAACACTCATTATTTTCTGGTGTGAAGTGGTATCTCATTGTAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 90 bp CAGGCGCCCTGTGATCCACTTTCTTCGTATTCTTTTCTTTGGTCTTaGGTGCAGATCCTAGGCGAGTCCATAAATTACCTGATTTCTTCT +
Preference number: 1 (lower is better)
Translates to: QAPCDPLSSYSFLWS*VQILGESINYLISS
Trigger: AGAAGAAATCAGGTAATTTATGGACTCGCCTAGGATCTGCACCCAAGACCAAAGAAAAGAATACGAAGAAAGTGGATCACAGGGCGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR CCA 90 bp GCCACAAATTATCCTGGGTACCTGGTAACTCTCCAGAGAGGAGAGTaGGAAACAAATGAGGTATCTGCAATTATCATCAAGCAGCAAACA +
Preference number: 1 (lower is better)
Translates to: ATNYPGYLVTLQRGE*ETNEVSAIIIKQQT
Trigger: TGTTTGCTGCTTGATGATAATTGCAGATACCTCATTTGTTTCCCACTCTCCTCTCTGGAGAGTTACCAGGTACCCAGGATAATTTGTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 90 bp TTACACTCCATTTTTATCTTAGGCACTGACCTTAGAACTGAATCCTaGAGAGAGCTGAGACTCTTCTGTGGCAGTACCATGGGACACATA +
Preference number: 1 (lower is better)
Translates to: LHSIFILGTDLRTES*RELRLFCGSTMGHI
Trigger: TATGTGTCCCATGGTACTGCCACAGAAGAGTCTCAGCTCTCTCCAGGATTCAGTTCTAAGGTCAGTGCCTAAGATAAAAATGGAGTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 90 bp CAACCAAACAGTAATGTGTTCCCACATGGGCAAGAAATGACTACATaGGACCTCAAGATGTTGGTCTTCAATAGGGCACCTTCCTTAGAT +
Preference number: 1 (lower is better)
Translates to: QPNSNVFPHGQEMTT*DLKMLVFNRAPSLD
Trigger: ATCTAAGGAAGGTGCCCTATTGAAGACCAACATCTTGAGGTCCCATGTAGTCATTTCTTGCCCATGTGGGAACACATTACTGTTTGGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR TCA 90 bp GTTATTTTGTTTCTCGCATTGAAAGGCTGCTTGGCTAAGGTTCTGTaGAGATCCGATGACATTTCCAACACTTTGCCTTGTCTGCTTTGC +
Preference number: 1 (lower is better)
Translates to: VILFLALKGCLAKVL*RSDDISNTLPCLLC
Trigger: GCAAAGCAGACAAGGCAAAGTGTTGGAAATGTCATCGGATCTTCACAGAACCTTAGCCAAGCAGCCTTTCAATGCGAGAAACAAAATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR TCA 90 bp TCCTGGGTACCTGGTAACTCTCCAGAGAGGAGAGTGGGAAACAAATaGGGTATCTGCAATTATCATCAAGCAGCAAACATGTATGTAAAA +
Preference number: 1 (lower is better)
Translates to: SWVPGNSPERRVGNK*GICNYHQAANMYVK
Trigger: TTTTACATACATGTTTGCTGCTTGATGATAATTGCAGATACCTCATTTGTTTCCCACTCTCCTCTCTGGAGAGTTACCAGGTACCCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR TCA 90 bp TTTCCAACACTTTGCCTTGTCTGCTTTGCTCTGACAAAGTGCTTATaGCTACTAGATCTTGCTCGGTTATGTGAGATTACAATTCACCGG +
Preference number: 1 (lower is better)
Translates to: FPTLCLVCFALTKCL*LLDLARLCEITIHR
Trigger: CCGGTGAATTGTAATCTCACATAACCGAGCAAGATCTAGTAGTCATAAGCACTTTGTCAGAGCAAAGCAGACAAGGCAAAGTGTTGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR TCA 90 bp GAAATTACAGTCCAGTGTAGAGGTGTGCAGGGTTGTGGGGTACAGTaGTTTGGCATTATACACACATTTCGCTTAAACACAATGGTATTT +
Preference number: 1 (lower is better)
Translates to: EITVQCRGVQGCGVQ*FGIIHTFRLNTMVF
Trigger: AAATACCATTGTGTTTAAGCGAAATGTGTGTATAATGCCAAATCACTGTACCCCACAACCCTGCACACCTCTACACTGGACTGTAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 90 bp TCTGCAGCCCCATTCGCTTTGAGATGTGAATGTGTTAACCCAGGGTaGACAATGGTGTTGACTTCATTACTAGATAAAAATCCATGTTAT +
Preference number: 1 (lower is better)
Translates to: SAAPFALRCECVNPG*TMVLTSLLDKNPCY
Trigger: ATAACATGGATTTTTATCTAGTAATGAAGTCAACACCATTGTCCACCCTGGGTTAACACATTCACATCTCAAAGCGAATGGGGCTGCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR TCA 90 bp GAATATTACACATTTCCTGAATTTGAGAACTGTACCATGGGCATGTaGGAGGCTGTCCCTGTTCTTGGGAAATGTTCACTAAAACATCTT +
Preference number: 1 (lower is better)
Translates to: EYYTFPEFENCTMGM*EAVPVLGKCSLKHL
Trigger: AAGATGTTTTAGTGAACATTTCCCAAGAACAGGGACAGCCTCTCACATGCCCATGGTACAGTTCTCAAATTCAGGAAATGTGTAATATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR TCA 90 bp TGCTCTGACAAAGTGCTTATGACTACTAGATCTTGCTCGGTTATGTaGGATTACAATTCACCGGTTTCCATCCTGTATGAAACAGAAGTT +
Preference number: 1 (lower is better)
Translates to: CSDKVLMTTRSCSVM*DYNSPVSILYETEV
Trigger: AACTTCTGTTTCATACAGGATGGAAACCGGTGAATTGTAATCTCACATAACCGAGCAAGATCTAGTAGTCATAAGCACTTTGTCAGAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 90 bp CATAATTCATTCATTTACCAAACACTTTCGAAGCACTACTTACTCTaGGCTGGCCTGATGAAAGGATACAGAGATAACACCACAAAGAAA +
Preference number: 1 (lower is better)
Translates to: HNSFIYQTLSKHYLL*AGLMKGYRDNTTKK
Trigger: TTTCTTTGTGGTGTTATCTCTGTATCCTTTCATCAGGCCAGCCCAGAGTAAGTAGTGCTTCGAAAGTGTTTGGTAAATGAATGAATTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR TCA 90 bp CAGAGAAACCAGAACCATCTCTTTCCTAGAATCCTAATAAGAAGCTaGAATATATCATGGTTATATCCTCTAATCTCTCTAAAGGGAGGG +
Preference number: 1 (lower is better)
Translates to: QRNQNHLFPRILIRS*NISWLYPLISLKGG
Trigger: CCCTCCCTTTAGAGAGATTAGAGGATATAACCATGATATATTTCAGCTTCTTATTAGGATTCTAGGAAAGAGATGGTTCTGGTTTCTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR TCA 90 bp AAAAACAACGGCTTTCAAAATCATTATTGGGACAGTTGGCAAATTTaGAACAGGAACTACAAATTAGCAACTCCTGGGCTGATCAGAGAA +
Preference number: 1 (lower is better)
Translates to: KNNGFQNHYWDSWQI*NRNYKLATPGLIRE
Trigger: TTCTCTGATCAGCCCAGGAGTTGCTAATTTGTAGTTCCTGTTTCAAATTTGCCAACTGTCCCAATAATGATTTTGAAAGCCGTTGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR TCA 90 bp GTTCTTGGGAAATGTTCACTAAAACATCTTACGGATAAACGAGCATaGTGTATACAAATAATCCTCAAATGGTTCATGGTTCAGAGAGGA +
Preference number: 1 (lower is better)
Translates to: VLGKCSLKHLTDKRA*CIQIILKWFMVQRG
Trigger: TCCTCTCTGAACCATGAACCATTTGAGGATTATTTGTATACATCATGCTCGTTTATCCGTAAGATGTTTTAGTGAACATTTCCCAAGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR GCA 90 bp CTCAAATCTTGCAGCCCTTTACTTCCTTTATTAATAACAGTGTTCTaGATTAATTCGTGCCACAGTGTAATCAACTATCAATGTGACCAT +
Preference number: 1 (lower is better)
Translates to: LKSCSPLLPLLITVF*INSCHSVINYQCDH
Trigger: ATGGTCACATTGATAGTTGATTACACTGTGGCACGAATTAATGCAGAACACTGTTATTAATAAAGGAAGTAAAGGGCTGCAAGATTTGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR-3UTR TCA 90 bp GCTGCAGCTCTTATCTACCTGGGCGGCACTGGTGCACCTCTGAGGTCAGGTCCGAGGGTCCCGGAAGGGTaGGCTGGCCGCTTCCCTCCT +
Preference number: 2 (lower is better)
Translates to: AAALIYLGGTGAPLRSGPRVPEG*AGRFPP
Trigger: AGGAGGGAAGCGGCCAGCTCACCCTTCCGGGACCCT...CGGACCTGACCTCAGAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR CAA 90 bp CTGCTGGCACTGGATCGTCTAGACGCGCTCCGCTCCCGGGGCTGCTaGAGAGCCGGGAGCTCCTCGTGGTACTCTACCACCACTCTGTCA +
Preference number: 2 (lower is better)
Translates to: LLALDRLDALRSRGC*RAGSSSWYSTTTLS
Trigger: TGACAGAGTGGTGGTAGAGTACCACGAGGAGCTCCCGGCTCTCAAGCAGCCCCGGGAGCGGAGCGCGTCTAGACGATCCAGTGCCAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR-3UTR TCA 90 bp GCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAAGGGTCCCGGAAGGGTaGGCTGGCCGCTTCCCTCCT +
Preference number: 2 (lower is better)
Translates to: AGRFPPLPPRRMSNKHLGRVPEG*AGRFPP
Trigger: AGGAGGGAAGCGGCCAGCTCACCCTTCCGGGACCCT...TCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR-3UTR GCA 90 bp GAGAGCAGCCCAGTCACTGAGCAGATCCCTGCTAGGGCAGGGCTAGAACCCAGAGCCCGGGCAAGCTCATaGCTCTGCTGCACCTGCGGC +
Preference number: 2 (lower is better)
Translates to: ESSPVTEQIPARAGLEPRARASS*LCCTCG
Trigger: GCCGCAGGTGCAGCAGAGGCATGAGCTTGCCCGGGC...TCTGGGTTCTAGCCCTGCCCTAGCAGGGATCTGCTCAGTGACTGGGCTGCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR TCA 90 bp GAGAGCAGCCCAGTCACTGAGCAGATCCCTGCTAGGGCAGGGCTAGAACCCAGAGTGCTCGGCGTGAGGTaGAAGGGCTGCCTGTGGGTC +
Preference number: 2 (lower is better)
Translates to: ESSPVTEQIPARAGLEPRVLGVR*KGCLWV
Trigger: GACCCACAGGCAGCCCTTTCACCTCACGCCGAGCAC...TCTGGGTTCTAGCCCTGCCCTAGCAGGGATCTGCTCAGTGACTGGGCTGCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR CCA 90 bp ATGAGACACACAGGGGTCCGTAAAGCCCACCTGGCGGTAGCTGCTTTCCCCACACCCGGAAGGGTGAGCTaGCCGCTTCCCTCCTCTTCC +
Preference number: 2 (lower is better)
Translates to: MRHTGVRKAHLAVAAFPTPGRVS*PLPSSS
Trigger: GGAAGAGGAGGGAAGCGGCCAGCTCACCCTTCCGGG...TGTGGGGAAAGCAGCTACCGCCAGGTGGGCTTTACGGACCCCTGTGTGTCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR GCA 90 bp AGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACACTCCGCTCCCGGGGCTaGTTGAGAGCCGGGAGCTCC +
Preference number: 2 (lower is better)
Translates to: SSATSKDRQDPGCTVCTTLRSRG*LRAGSS
Trigger: GGAGCTCCCGGCTCTCAAGCAGCCCCGGGAGCGGAG...TGTTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR-3UTR CCA 90 bp ATGAGACACACAGGGGTCCGTAAAGCCCACCTGGCGGTAGCTGCTTTCCCCACAGGAGGGGGAGAAGCCTaGGCGGAAGCATGTCACTGG +
Preference number: 2 (lower is better)
Translates to: MRHTGVRKAHLAVAAFPTGGGEA*AEACHW
Trigger: CCAGTGACATGCTTCCGCCCAGGCTTCTCCCCCTCC...TGTGGGGAAAGCAGCTACCGCCAGGTGGGCTTTACGGACCCCTGTGTGTCTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR TCA 90 bp TCTTCTCCCGAGTATCGGCGTAGAGGCCTTTACTATCCTGCCTGGGAACACCTACGGAGGGTGACTGTGTaGGCAGGAGCGAGAGGGCGC +
Preference number: 2 (lower is better)
Translates to: SSPEYRRRGLYYPAWEHLRRVTV*AGARGR
Trigger: GCGCCCTCTCGCTCCTGCTCACACAGTCACCCTCCG...TAGGTGTTCCCAGGCAGGATAGTAAAGGCCTCTACGCCGATACTCGGGAGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR-3UTR TCA 90 bp TGCTGCACCTGCGGCCTGCCTCAGTTCCCAAGCTCCCCAAAAGTGATCTTCTCGGGCAGGAGAATCGCTTaGACCCCGGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: CCTCGLPQFPSSPKVIFSGRRIA*TPEVEV
Trigger: AACCTCCACCTCCGGGGTTCAAGCGATTCTCCTGCC...CGAGAAGATCACTTTTGGGGAGCTTGGGAACTGAGGCAGGCCGCAGGTGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR GCA 90 bp ATGAGACACACAGGGGTCCGTAAAGCCCACCTGGCGGTAGCTGCTTTCCCCACAAAGTGTGCAGCCCTGTaGCCACATGTGTGGGGAGTG +
Preference number: 2 (lower is better)
Translates to: MRHTGVRKAHLAVAAFPTKCAAL*PHVWGV
Trigger: CACTCCCCACACATGTGGGCACAGGGCTGCACACTT...TGTGGGGAAAGCAGCTACCGCCAGGTGGGCTTTACGGACCCCTGTGTGTCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR CCA 90 bp TGCTGCACCTGCGGCCTGCCTCAGTTCCCAAGCTCCCCAAAAGTGATCTTCTCGAGGTGGAGGTTGCAGTaGGCCGAGATCGTGCCATTG +
Preference number: 2 (lower is better)
Translates to: CCTCGLPQFPSSPKVIFSRWRLQ*AEIVPL
Trigger: CAATGGCACGATCTCGGCCCACTGCAACCTCCACCT...CGAGAAGATCACTTTTGGGGAGCTTGGGAACTGAGGCAGGCCGCAGGTGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR CCA 90 bp GAGAGCAGCCCAGTCACTGAGCAGATCCCTGCTAGGGCAGGGCTAGAACCCAGAAAAATTAGCCAGGCGTaGCAGCGTGTGCCTGTAGCC +
Preference number: 2 (lower is better)
Translates to: ESSPVTEQIPARAGLEPRKISQA*QRVPVA
Trigger: GGCTACAGGCACACGCTGCCACGCCTGGCTAATTTT...TCTGGGTTCTAGCCCTGCCCTAGCAGGGATCTGCTCAGTGACTGGGCTGCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR TCA 90 bp GAGAGCAGCCCAGTCACTGAGCAGATCCCTGCTAGGGCAGGGCTAGAACCCAGACCACCAAGCCCGGCCTaGGAATTCTCTTCTGTCAAT +
Preference number: 2 (lower is better)
Translates to: ESSPVTEQIPARAGLEPRPPSPA*EFSSVN
Trigger: ATTGACAGAAGAGAATTCTCAGGCCGGGCTTGGTGG...TCTGGGTTCTAGCCCTGCCCTAGCAGGGATCTGCTCAGTGACTGGGCTGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR GCA 90 bp GAGAGCAGCCCAGTCACTGAGCAGATCCCTGCTAGGGCAGGGCTAGAACCCAGAACAGGCCAGGGATACTaGCAGAGGATAGACCTTGGT +
Preference number: 2 (lower is better)
Translates to: ESSPVTEQIPARAGLEPRTGQGY*QRIDLG
Trigger: ACCAAGGTCTATCCTCTGGCAGTATCCCTGGCCTGT...TCTGGGTTCTAGCCCTGCCCTAGCAGGGATCTGCTCAGTGACTGGGCTGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR GCA 90 bp GGGGGAGGTTCCTACTGCGCGCCCCACCCTGTGCAAGAATGTCAGGCTTTAGGGCACCACTCTGTCATCTaGATCCATGTCCTGGTCTTC +
Preference number: 2 (lower is better)
Translates to: GGGSYCAPHPVQECQALGHHSVI*IHVLVF
Trigger: GAAGACCAGGACATGGATGCAGATGACAGAGTGGTG...CCCTAAAGCCTGACATTCTTGCACAGGGTGGGGCGCGCAGTAGGAACCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR CAA 90 bp CCCACTTGCCTTCTGACTCTTAGGAAGCCAGAAAGAGTGACGGCATaGCTGAGACCAGAGCCCAGGGCTGCAGAGCAGTGGTACTCACGA +
Preference number: 2 (lower is better)
Translates to: PTCLLTLRKPERVTA*LRPEPRAAEQWYSR
Trigger: TCGTGAGTACCACTGCTCTGCAGCCCTGGGCTCTGGTCTCAGCAATGCCGTCACTCTTTCTGGCTTCCTAAGAGTCAGAAGGCAAGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR TCA 90 bp CTAGGGTCCCGGAAGGGTGAGCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGAAAAATTCTTCAACATTaGCCCATAATCCCACCCCAG +
Preference number: 2 (lower is better)
Translates to: LGSRKGELAASLLFPLEGKILQH*PIIPPQ
Trigger: CTGGGGTGGGATTATGGGTCAATGTTGAAGAATTTT...TCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGCTCACCCTTCCGGGACCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR-3UTR TCA 90 bp GAGAGCAGCCCAGTCACTGAGCAGATCCCTGCTAGGGCAGGGCTAGAACCCAGACTGCTGTCTTCAGAGTaGGTCAAAAGCACTGAGGCA +
Preference number: 2 (lower is better)
Translates to: ESSPVTEQIPARAGLEPRLLSSE*VKSTEA
Trigger: TGCCTCAGTGCTTTTGACTCACTCTGAAGACAGCAG...TCTGGGTTCTAGCCCTGCCCTAGCAGGGATCTGCTCAGTGACTGGGCTGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR TCA 90 bp TTGGGTGCAGATCCTAGGCGAGTCCATAAATTACCTGATTTCTTCTCCCGAGTAGCTCCCGGGGCTGCTTaGGAGCCGGGAGCTCCTCGT +
Preference number: 2 (lower is better)
Translates to: LGADPRRVHKLPDFFSRVAPGAA*EPGAPR
Trigger: ACGAGGAGCTCCCGGCTCTCAAGCAGCCCCGGGAGC...TACTCGGGAGAAGAAATCAGGTAATTTATGGACTCGCCTAGGATCTGCACCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR-3UTR GCA 90 bp GCTGCAGCTCTTATCTACCTGGGCGGCACTGGTGCACCTCTGAGGTCAGGTCCGCGGAAGCACAGTCAATaGTGCAGCTCTTATCTACCT +
Preference number: 2 (lower is better)
Translates to: AAALIYLGGTGAPLRSGPRKHSQ*CSSYLP
Trigger: AGGTAGATAAGAGCTGCAGCATTGACTGTGCTTCCG...CGGACCTGACCTCAGAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR-3UTR CCA 90 bp TTTTCTCAAAGGGTAAAGCCTGTGGGGTGGTGGGAAAGGAATCGAGGGCCCAGAAAGCCTGTGGGGTGGTaGGAAAGGAATCGAGGGCCC +
Preference number: 2 (lower is better)
Translates to: FSQRVKPVGWWERNRGPRKPVGW*ERNRGP
Trigger: GGGCCCTCGATTCCTTTCCCACCACCCCACAGGCTT...TCTGGGCCCTCGATTCCTTTCCCACCACCCCACAGGCTTTACCCTTTGAGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR-3UTR CCA 90 bp CTAGGGTCCCGGAAGGGTGAGCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGAGGAATTGACTTTTCTTaGGAAAAGGGTGCTGGTAAC +
Preference number: 2 (lower is better)
Translates to: LGSRKGELAASLLFPLEGGIDFS*EKGAGN
Trigger: GTTACCAGCACCCTTTTCCCAAGAAAAGTCAATTCC...TCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGCTCACCCTTCCGGGACCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR-3UTR CCA 90 bp GCTGCAGCTCTTATCTACCTGGGCGGCACTGGTGCACCTCTGAGGTCAGGTCCGCTTCCTCCTCTTCAATaGGTTCCTCGGGAACATTCA +
Preference number: 2 (lower is better)
Translates to: AAALIYLGGTGAPLRSGPLPPLQ*VPREHS
Trigger: TGAATGTTCCCGAGGAACCCATTGAAGAGGAGGAAG...CGGACCTGACCTCAGAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR-3UTR CCA 90 bp AGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACAGCTGACTGGTGGCCGTaGACGGGAGTGCTGACGTTT +
Preference number: 2 (lower is better)
Translates to: SSATSKDRQDPGCTVCTTADWWP*TGVLTF
Trigger: AAACGTCAGCACTCCCGTCCACGGCCACCAGTCAGC...TGTTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR-3UTR CCA 90 bp GGTGAGCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCAACCGGCTCTTCTTTTaGCGAGACTGCTCTTTCTCC +
Preference number: 2 (lower is better)
Translates to: GELAASLLFPLEGCPISTNRLFF*RDCSFS
Trigger: GGAGAAAGAGCAGTCTCGCCAAAAGAAGAGCCGGTT...GGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGCTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR-3UTR TCA 90 bp TTTTCTCAAAGGGTAAAGCCTGTGGGGTGGTGGGAAAGGAATCGAGGGCCCAGAAAGAGGCCCATGCCATaGGCAATCCCCGAGGGAAGA +
Preference number: 2 (lower is better)
Translates to: FSQRVKPVGWWERNRGPRKRPMP*AIPEGR
Trigger: TCTTCCCTCGGGGATTGCTCATGGCATGGGCCTCTT...TCTGGGCCCTCGATTCCTTTCCCACCACCCCACAGGCTTTACCCTTTGAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR-3UTR TCA 90 bp TGCTGCACCTGCGGCCTGCCTCAGTTCCCAAGCTCCCCAAAAGTGATCTTCTCGATCTTCACATCAAGCTaGCAGCACGTAAGAGGCCCA +
Preference number: 2 (lower is better)
Translates to: CCTCGLPQFPSSPKVIFSIFTSS*QHVRGP
Trigger: TGGGCCTCTTACGTGCTGTCAGCTTGATGTGAAGAT...CGAGAAGATCACTTTTGGGGAGCTTGGGAACTGAGGCAGGCCGCAGGTGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR TCA 90 bp GAGAGCAGCCCAGTCACTGAGCAGATCCCTGCTAGGGCAGGGCTAGAACCCAGACACATGGGCAAGAAATaGCTACATGGGACCTCAAGA +
Preference number: 2 (lower is better)
Translates to: ESSPVTEQIPARAGLEPRHMGKK*LHGTSR
Trigger: TCTTGAGGTCCCATGTAGTCATTTCTTGCCCATGTG...TCTGGGTTCTAGCCCTGCCCTAGCAGGGATCTGCTCAGTGACTGGGCTGCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR TCA 90 bp ATGAGACACACAGGGGTCCGTAAAGCCCACCTGGCGGTAGCTGCTTTCCCCACACCAGGTGCTGTGGACTaGACTGTAAATGTCCTCCAA +
Preference number: 2 (lower is better)
Translates to: MRHTGVRKAHLAVAAFPTPGAVD*TVNVLQ
Trigger: TTGGAGGACATTTACAGTTCAGTCCACAGCACCTGG...TGTGGGGAAAGCAGCTACCGCCAGGTGGGCTTTACGGACCCCTGTGTGTCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR GCA 90 bp ACTAGCCCAGAATGTCGATGTTTATACGACGTCAAGCCAACGTCATCCCCAATCGGGGGAGGTTCCTACTaGGCGCCCCACCCTGTGCAA +
Preference number: 2 (lower is better)
Translates to: TSPECRCLYDVKPTSSPIGGGSY*APHPVQ
Trigger: TTGCACAGGGTGGGGCGCGCAGTAGGAACCTCCCCC...GATTGGGGATGACGTTGGCTTGACGTCGTATAAACATCGACATTCTGGGCTAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR-3UTR GCA 90 bp CTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAATTGACTTTTCTTCCTGGGCGGCACTGGTaGACCTCTGAGGTCAGGTCC +
Preference number: 2 (lower is better)
Translates to: LLFPLEGCPISTWELTFLPGRHW*TSEVRS
Trigger: GGACCTGACCTCAGAGGTGCACCAGTGCCGCCCAGG...AAGAAAAGTCAATTCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR-3UTR GCA 90 bp GGTGAGCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCAAGCACAGTCAATGCTaGAGCTCTTATCTACCTGGG +
Preference number: 2 (lower is better)
Translates to: GELAASLLFPLEGCPISTKHSQC*SSYLPG
Trigger: CCCAGGTAGATAAGAGCTGCAGCATTGACTGTGCTT...GGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGCTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR-3UTR GCA 90 bp GCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGACGGAAGCACAGTCAATaGTGCAGCTCTTATCTACCT +
Preference number: 2 (lower is better)
Translates to: AGRFPPLPPRRMSNKHLGRKHSQ*CSSYLP
Trigger: AGGTAGATAAGAGCTGCAGCATTGACTGTGCTTCCG...TCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR-3UTR GCA 90 bp TCTTCTCCCGAGTATCGGCGTAGAGGCCTTTACTATCCTGCCTGGGAACACCTACACGTAAGAGGCCCATaGCATGAGCAATCCCCGAGG +
Preference number: 2 (lower is better)
Translates to: SSPEYRRRGLYYPAWEHLHVRGP*HEQSPR
Trigger: CCTCGGGGATTGCTCATGGCATGGGCCTCTTACGTG...TAGGTGTTCCCAGGCAGGATAGTAAAGGCCTCTACGCCGATACTCGGGAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR-3UTR GCA 90 bp ATGAGACACACAGGGGTCCGTAAAGCCCACCTGGCGGTAGCTGCTTTCCCCACAGAAGATGTCTTCAGGTaGCACAACGTGGGGACAGAA +
Preference number: 2 (lower is better)
Translates to: MRHTGVRKAHLAVAAFPTEDVFR*HNVGTE
Trigger: TTCTGTCCCCACGTTGTGGCACCTGAAGACATCTTC...TGTGGGGAAAGCAGCTACCGCCAGGTGGGCTTTACGGACCCCTGTGTGTCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR CCA 90 bp TGCTGCACCTGCGGCCTGCCTCAGTTCCCAAGCTCCCCAAAAGTGATCTTCTCGAAGGAAGATCAGTGGTaGCCAGAGGCTAAGAGGGAA +
Preference number: 2 (lower is better)
Translates to: CCTCGLPQFPSSPKVIFSKEDQW*PEAKRE
Trigger: TTCCCTCTTAGCCTCTGGCCACCACTGATCTTCCTT...CGAGAAGATCACTTTTGGGGAGCTTGGGAACTGAGGCAGGCCGCAGGTGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR CCA 90 bp GAGAGCAGCCCAGTCACTGAGCAGATCCCTGCTAGGGCAGGGCTAGAACCCAGATCCTGGATTGGATCCTaGACCAGAAAAACAACGGCT +
Preference number: 2 (lower is better)
Translates to: ESSPVTEQIPARAGLEPRSWIGS*TRKTTA
Trigger: AGCCGTTGTTTTTCTGGTCCAGGATCCAATCCAGGA...TCTGGGTTCTAGCCCTGCCCTAGCAGGGATCTGCTCAGTGACTGGGCTGCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR TCA 90 bp GCTGCAGCTCTTATCTACCTGGGCGGCACTGGTGCACCTCTGAGGTCAGGTCCGAATCAACTATCAATGTaGCCATTAGCTCCGCCACAA +
Preference number: 2 (lower is better)
Translates to: AAALIYLGGTGAPLRSGPNQLSM*PLAPPQ
Trigger: TTGTGGCGGAGCTAATGGTCACATTGATAGTTGATT...CGGACCTGACCTCAGAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR-3UTR GCA 90 bp TTGGGTGCAGATCCTAGGCGAGTCCATAAATTACCTGATTTCTTCTCCCGAGTACCTGGGCGGCACTGGTaGACCTCTGAGGTCAGGTCC +
Preference number: 2 (lower is better)
Translates to: LGADPRRVHKLPDFFSRVPGRHW*TSEVRS
Trigger: GGACCTGACCTCAGAGGTGCACCAGTGCCGCCCAGG...TACTCGGGAGAAGAAATCAGGTAATTTATGGACTCGCCTAGGATCTGCACCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR-3UTR GCA 90 bp TTAGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACGACAGGATCCAGGCTaGACTGTGTGCACAACAGCC +
Preference number: 2 (lower is better)
Translates to: LAPPQVKIDRIQAALCAQRQDPG*TVCTTA
Trigger: GGCTGTTGTGCACACAGTGCAGCCTGGATCCTGTCG...TTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR-3UTR GCA 90 bp GCTGCAGCTCTTATCTACCTGGGCGGCACTGGTGCACCTCTGAGGTCAGGTCCGGCAGCTCTCAAATCTTaGAGCCCTTTACTTCCTTTA +
Preference number: 2 (lower is better)
Translates to: AAALIYLGGTGAPLRSGPAALKS*SPLLPL
Trigger: TAAAGGAAGTAAAGGGCTGCAAGATTTGAGAGCTGC...CGGACCTGACCTCAGAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR-3UTR GCA 90 bp TTAGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACCTGTCTACACCTCATaGGCGCCCTCAGTTGTCTCC +
Preference number: 2 (lower is better)
Translates to: LAPPQVKIDRIQAALCAQPVYTS*APSVVS
Trigger: GGAGACAACTGAGGGCGCGCATGAGGTGTAGACAGG...TTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR GCA 90 bp GAGGTAGAAACAGCTCTGTGCACAGTCTGTAGGGCTAGTGAGATCAAGATACATCCCGGAGGTGGAGGTTaGAGTGGGCCGAGATCGTGC +
Preference number: 2 (lower is better)
Translates to: EVETALCTVCRASEIKIHPGGGG*SGPRSC
Trigger: GCACGATCTCGGCCCACTGCAACCTCCACCTCCGGG...ATGTATCTTGATCTCACTAGCCCTACAGACTGTGCACAGAGCTGTTTCTACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR GCA 90 bp ATGAGACACACAGGGGTCCGTAAAGCCCACCTGGCGGTAGCTGCTTTCCCCACACTCCACATGACCAGGTaGTGTGGACTGAACTGTAAA +
Preference number: 2 (lower is better)
Translates to: MRHTGVRKAHLAVAAFPTLHMTR*CGLNCK
Trigger: TTTACAGTTCAGTCCACAGCACCTGGTCATGTGGAG...TGTGGGGAAAGCAGCTACCGCCAGGTGGGCTTTACGGACCCCTGTGTGTCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR CCA 90 bp TTAGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAAAGCAGAGCCAGGGGTTaGCATCCAGGTGTCCGATTC +
Preference number: 2 (lower is better)
Translates to: LAPPQVKIDRIQAALCAQSRARG*HPGVRF
Trigger: GAATCGGACACCTGGATGCCAACCCCTGGCTCTGCT...TTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR CCA 90 bp GAGAGCAGCCCAGTCACTGAGCAGATCCCTGCTAGGGCAGGGCTAGAACCCAGAAGAAGACTTTGTGTTTaGAGTGTGAACGTCAGGGTG +
Preference number: 2 (lower is better)
Translates to: ESSPVTEQIPARAGLEPRRRLCV*SVNVRV
Trigger: CACCCTGACGTTCACACTCCAAACACAAAGTCTTCT...TCTGGGTTCTAGCCCTGCCCTAGCAGGGATCTGCTCAGTGACTGGGCTGCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR CCA 90 bp AGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACATTTAGTACTGCTGACTaGTGGCCGTGGACGGGAGTG +
Preference number: 2 (lower is better)
Translates to: SSATSKDRQDPGCTVCTTFSTAD*WPWTGV
Trigger: CACTCCCGTCCACGGCCACCAGTCAGCAGTACTAAA...TGTTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR-3UTR TCA 90 bp AATTCATTCATTTACCAAACACTTTCGAAGCACTACTTACTCTGGGCTGGCCTGCGGAGGGTGACTGTGTaGGCAGGAGCGAGAGGGCGC +
Preference number: 2 (lower is better)
Translates to: NSFIYQTLSKHYLLWAGLRRVTV*AGARGR
Trigger: GCGCCCTCTCGCTCCTGCTCACACAGTCACCCTCCG...CAGGCCAGCCCAGAGTAAGTAGTGCTTCGAAAGTGTTTGGTAAATGAATGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR GCA 90 bp GCTGCAGCTCTTATCTACCTGGGCGGCACTGGTGCACCTCTGAGGTCAGGTCCGAGAAGTTCAGTTCTCTaGTCTTTGGATGAACTGTGT +
Preference number: 2 (lower is better)
Translates to: AAALIYLGGTGAPLRSGPRSSVL*SLDELC
Trigger: ACACAGTTCATCCAAAGAGCAGAGAACTGAACTTCT...CGGACCTGACCTCAGAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR-3UTR GCA 90 bp AGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACAGCATATTCTAAACCCTaGAGAGGCATGCCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: SSATSKDRQDPGCTVCTTAYSKP*RGMPAG
Trigger: CCCAGCTGGCATGCCTCTGCAGGGTTTAGAATATGC...TGTTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR GCA 90 bp TGCTGCACCTGCGGCCTGCCTCAGTTCCCAAGCTCCCCAAAAGTGATCTTCTCGCAAATGGACCTGAGCTaGTGGTGTAAAACCAAAAGG +
Preference number: 2 (lower is better)
Translates to: CCTCGLPQFPSSPKVIFSQMDLS*WCKTKR
Trigger: CCTTTTGGTTTTACACCAGCAGCTCAGGTCCATTTG...CGAGAAGATCACTTTTGGGGAGCTTGGGAACTGAGGCAGGCCGCAGGTGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR CCA 90 bp CTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAATTGACTTTTCTTAAGCCTGTGGGGTGGTaGGAAAGGAATCGAGGGCCC +
Preference number: 2 (lower is better)
Translates to: LLFPLEGCPISTWELTFLKPVGW*ERNRGP
Trigger: GGGCCCTCGATTCCTTTCCCACCACCCCACAGGCTT...AAGAAAAGTCAATTCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR-3UTR CCA 90 bp GCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAGGAATTGACTTTTCTTaGGAAAAGGGTGCTGGTAAC +
Preference number: 2 (lower is better)
Translates to: AGRFPPLPPRRMSNKHLGGIDFS*EKGAGN
Trigger: GTTACCAGCACCCTTTTCCCAAGAAAAGTCAATTCC...TCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR-3UTR CCA 90 bp TGCTGCACCTGCGGCCTGCCTCAGTTCCCAAGCTCCCCAAAAGTGATCTTCTCGCTCCAGAGAGGAGAGTaGGAAACAAATGAGGTATCT +
Preference number: 2 (lower is better)
Translates to: CCTCGLPQFPSSPKVIFSLQRGE*ETNEVS
Trigger: AGATACCTCATTTGTTTCCCACTCTCCTCTCTGGAG...CGAGAAGATCACTTTTGGGGAGCTTGGGAACTGAGGCAGGCCGCAGGTGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR TCA 90 bp CTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAATTGACTTTTCTTGCACTGGTGCACCTCTaGGGTCAGGTCCGTGAGATT +
Preference number: 2 (lower is better)
Translates to: LLFPLEGCPISTWELTFLALVHL*GQVREI
Trigger: AATCTCACGGACCTGACCTCAGAGGTGCACCAGTGC...AAGAAAAGTCAATTCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR-3UTR TCA 90 bp AGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACAAAAGACGACACCACTTaGGCTTCCCCTTTAGCCAAC +
Preference number: 2 (lower is better)
Translates to: SSATSKDRQDPGCTVCTTKDDTT*ASPLAN
Trigger: GTTGGCTAAAGGGGAAGCTCAAGTGGTGTCGTCTTT...TGTTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR-3UTR TCA 90 bp AGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACAAGAGTAAACCGCCACTaGGATGCACCAACAAAGCCA +
Preference number: 2 (lower is better)
Translates to: SSATSKDRQDPGCTVCTTRVNRH*DAPTKP
Trigger: TGGCTTTGTTGGTGCATCTCAGTGGCGGTTTACTCT...TGTTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR TCA 90 bp ATGAGACACACAGGGGTCCGTAAAGCCCACCTGGCGGTAGCTGCTTTCCCCACATCCAAATTCATATGTTaGAGCCCTAACCCCCAATGT +
Preference number: 2 (lower is better)
Translates to: MRHTGVRKAHLAVAAFPTSKFIC*SPNPQC
Trigger: ACATTGGGGGTTAGGGCTTCAACATATGAATTTGGA...TGTGGGGAAAGCAGCTACCGCCAGGTGGGCTTTACGGACCCCTGTGTGTCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR GCA 90 bp CCAGAACTGGGCTGGGTTACCATAATTCATTCATTTACCAAACACTTTCGAAGCGGGGGAGGTTCCTACTaGGCGCCCCACCCTGTGCAA +
Preference number: 2 (lower is better)
Translates to: PELGWVTIIHSFTKHFRSGGGSY*APHPVQ
Trigger: TTGCACAGGGTGGGGCGCGCAGTAGGAACCTCCCCC...GCTTCGAAAGTGTTTGGTAAATGAATGAATTATGGTAACCCAGCCCAGTTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR GCA 90 bp GAGGTAGAAACAGCTCTGTGCACAGTCTGTAGGGCTAGTGAGATCAAGATACATTGCTGGCGAGCCCACTaGCGTCACAGCTTGGGAAGA +
Preference number: 2 (lower is better)
Translates to: EVETALCTVCRASEIKIHCWRAH*RHSLGR
Trigger: TCTTCCCAAGCTGTGACGGCAGTGGGCTCGCCAGCA...ATGTATCTTGATCTCACTAGCCCTACAGACTGTGCACAGAGCTGTTTCTACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR GCA 90 bp GCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGATTCTTTTGGCGAGACTaGTCTTTCTCCTTAATCAGA +
Preference number: 2 (lower is better)
Translates to: AGRFPPLPPRRMSNKHLGFFWRD*SFSLIR
Trigger: TCTGATTAAGGAGAAAGAGCAGTCTCGCCAAAAGAA...TCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR-3UTR CCA 90 bp ATGAGACACACAGGGGTCCGTAAAGCCCACCTGGCGGTAGCTGCTTTCCCCACAATGGACCTGAGCTGCTaGTGTAAAACCAAAAGGAAA +
Preference number: 2 (lower is better)
Translates to: MRHTGVRKAHLAVAAFPTMDLSC*CKTKRK
Trigger: TTTCCTTTTGGTTTTACACCAGCAGCTCAGGTCCAT...TGTGGGGAAAGCAGCTACCGCCAGGTGGGCTTTACGGACCCCTGTGTGTCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR CCA 90 bp CTAGATCTTGCTCGGTTATGTGAGATTACAATTCACCGGTTTCCATCCTGTATGCCGGCCTCAGATCTGTaGGGGACTGCGGGGGTGATG +
Preference number: 2 (lower is better)
Translates to: LDLARLCEITIHRFPSCMPASDL*GTAGVM
Trigger: CATCACCCCCGCAGTCCCCCACAGATCTGAGGCCGG...CATACAGGATGGAAACCGGTGAATTGTAATCTCACATAACCGAGCAAGATCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR CCA 90 bp GCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGATCGTATTCTTTTCTTTaGTCTTGGGTGCAGATCCTA +
Preference number: 2 (lower is better)
Translates to: AGRFPPLPPRRMSNKHLGSYSFL*SWVQIL
Trigger: TAGGATCTGCACCCAAGACCAAAGAAAAGAATACGA...TCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR-3UTR TCA 90 bp GACCACGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAACTGAGGTCAGGTCCGTaGGATTCGCCCCACACTAGG +
Preference number: 2 (lower is better)
Translates to: DHGLLPSLTPMFQQTEEKLRSGP*DSPHTR
Trigger: CCTAGTGTGGGGCGAATCTCACGGACCTGACCTCAG...TTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCGTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR-3UTR TCA 90 bp GAGCTGCTTTCCCGACTAACTTCAATCTGGAGAGATGGTAAGTTATCTAACCGGAAGAGGCCCATGCCATaGGCAATCCCCGAGGGAAGA +
Preference number: 2 (lower is better)
Translates to: ELLSRLTSIWRDGKLSNRKRPMP*AIPEGR
Trigger: TCTTCCCTCGGGGATTGCTCATGGCATGGGCCTCTT...CCGGTTAGATAACTTACCATCTCTCCAGATTGAAGTTAGTCGGGAAAGCAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR-3UTR TCA 90 bp GACCACGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAAGCTAGACGGGAAAACTaGGGCCCAGGTCCATGGAGC +
Preference number: 2 (lower is better)
Translates to: DHGLLPSLTPMFQQTEEKARREN*GPGPWS
Trigger: GCTCCATGGACCTGGGCCTCAGTTTTCCCGTCTAGC...TTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCGTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR TCA 90 bp TTAGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACGTGGACGGGAGTGCTaGCGTTTCTCATCTAATAGA +
Preference number: 2 (lower is better)
Translates to: LAPPQVKIDRIQAALCAQRGREC*RFSSNR
Trigger: TCTATTAGATGAGAAACGTCAGCACTCCCGTCCACG...TTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR-3UTR GCA 90 bp GCTGCAGCTCTTATCTACCTGGGCGGCACTGGTGCACCTCTGAGGTCAGGTCCGTTCTGCATTAATTCGTaGCACAGTGTAATCAACTAT +
Preference number: 2 (lower is better)
Translates to: AAALIYLGGTGAPLRSGPFCINS*HSVINY
Trigger: ATAGTTGATTACACTGTGGCACGAATTAATGCAGAA...CGGACCTGACCTCAGAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR-3UTR GCA 90 bp CAGGACTCTGCCTCTGAACCAGAGCTGCTTTCCCGACTAACTTCAATCTGGAGAAGGCCTTTACTATCCTaGCTGGGAACACCTAGCCTA +
Preference number: 2 (lower is better)
Translates to: QDSASEPELLSRLTSIWRRPLLS*LGTPSL
Trigger: TAGGCTAGGTGTTCCCAGGCAGGATAGTAAAGGCCT...TCTCCAGATTGAAGTTAGTCGGGAAAGCAGCTCTGGTTCAGAGGCAGAGTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR-3UTR CCA 90 bp GAGGTAGAAACAGCTCTGTGCACAGTCTGTAGGGCTAGTGAGATCAAGATACATAGCTGGAAAGGGCAGTaGCTGAAGAACGGAGAGGGG +
Preference number: 2 (lower is better)
Translates to: EVETALCTVCRASEIKIHSWKGQ*LKNGEG
Trigger: CCCCTCTCCGTTCTTCAGCCACTGCCCTTTCCAGCT...ATGTATCTTGATCTCACTAGCCCTACAGACTGTGCACAGAGCTGTTTCTACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR CCA 90 bp TTTTCTCAAAGGGTAAAGCCTGTGGGGTGGTGGGAAAGGAATCGAGGGCCCAGATCTTTTCTTTGGTCTTaGGTGCAGATCCTAGGCGAG +
Preference number: 2 (lower is better)
Translates to: FSQRVKPVGWWERNRGPRSFLWS*VQILGE
Trigger: CTCGCCTAGGATCTGCACCCAAGACCAAAGAAAAGA...TCTGGGCCCTCGATTCCTTTCCCACCACCCCACAGGCTTTACCCTTTGAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR-3UTR TCA 90 bp CTAGATCTTGCTCGGTTATGTGAGATTACAATTCACCGGTTTCCATCCTGTATGTCTAGCCCACACCCCTaGTGCTCCCCGGAAAGGAGA +
Preference number: 2 (lower is better)
Translates to: LDLARLCEITIHRFPSCMSSPHP*CSPERR
Trigger: TCTCCTTTCCGGGGAGCATCAGGGGTGTGGGCTAGA...CATACAGGATGGAAACCGGTGAATTGTAATCTCACATAACCGAGCAAGATCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR TCA 90 bp GACCACGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAAGCGCCAGGCGCCCTGTaGTCCACTTTCTTCGTATTC +
Preference number: 2 (lower is better)
Translates to: DHGLLPSLTPMFQQTEEKAPGAL*STFFVF
Trigger: GAATACGAAGAAAGTGGATCACAGGGCGCCTGGCGC...TTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCGTGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR-3UTR GCA 90 bp CGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAACACTGCACGTAAGAGGCCCATaGCATGAGCAATCCCCGAGG +
Preference number: 2 (lower is better)
Translates to: RFITISNAHVPANRRKTLHVRGP*HEQSPR
Trigger: CCTCGGGGATTGCTCATGGCATGGGCCTCTTACGTG...CAGTGTTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR-3UTR GCA 90 bp GCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGATTAATAACAGTGTTCTaGATTAATTCGTGCCACAGT +
Preference number: 2 (lower is better)
Translates to: AGRFPPLPPRRMSNKHLGLITVF*INSCHS
Trigger: ACTGTGGCACGAATTAATGCAGAACACTGTTATTAA...TCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR-3UTR CCA 90 bp CGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAACACTGCAGCTCTTATCTACCTaGGCGGCACTGGTGCACCTC +
Preference number: 2 (lower is better)
Translates to: RFITISNAHVPANRRKTLQLLST*AALVHL
Trigger: GAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTG...CAGTGTTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR CAA 90 bp ACATTCCAAGGCTCTCTAACACGAGTGTCTGCAGCCCCATTCGCTTaGAGATGTGAATGTGTTAACCCAGGGTGGACAATGGTGTTGACT +
Preference number: 2 (lower is better)
Translates to: TFQGSLTRVSAAPFA*RCECVNPGWTMVLT
Trigger: AGTCAACACCATTGTCCACCCTGGGTTAACACATTCACATCTCAAAGCGAATGGGGCTGCAGACACTCGTGTTAGAGAGCCTTGGAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR TCA 90 bp GCCCATGTTCCAGCAAACCGAAGAAAAACACTGTTTCTTAAAACTGCAGAGGAAGCACTGGTGCACCTCTaGGGTCAGGTCCGTGAGATT +
Preference number: 2 (lower is better)
Translates to: AHVPANRRKTLFLKTAEEALVHL*GQVREI
Trigger: AATCTCACGGACCTGACCTCAGAGGTGCACCAGTGC...TTCCTCTGCAGTTTTAAGAAACAGTGTTTTTCTTCGGTTTGCTGGAACATGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR-3UTR TCA 90 bp AGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACAAAAATTCTTCAACATTaGCCCATAATCCCACCCCAG +
Preference number: 2 (lower is better)
Translates to: SSATSKDRQDPGCTVCTTKILQH*PIIPPQ
Trigger: CTGGGGTGGGATTATGGGTCAATGTTGAAGAATTTT...TGTTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR-3UTR TCA 90 bp GCCCATGTTCCAGCAAACCGAAGAAAAACACTGTTTCTTAAAACTGCAGAGGAATCAGGACTCTGCCTCTaGACCAGAGCTGCTTTCCCG +
Preference number: 2 (lower is better)
Translates to: AHVPANRRKTLFLKTAEESGLCL*TRAAFP
Trigger: CGGGAAAGCAGCTCTGGTTCAGAGGCAGAGTCCTGA...TTCCTCTGCAGTTTTAAGAAACAGTGTTTTTCTTCGGTTTGCTGGAACATGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR-3UTR GCA 90 bp AGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACAATTCTTAAGATGTCTTaGCGAAGTAGCAAGAGCGGA +
Preference number: 2 (lower is better)
Translates to: SSATSKDRQDPGCTVCTTILKMS*RSSKSG
Trigger: TCCGCTCTTGCTACTTCGGCAAGACATCTTAAGAAT...TGTTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR-3UTR GCA 90 bp TTAGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAATGGCTCTCAGCTGTATaGTTCACAGGGAAAGAAAAG +
Preference number: 2 (lower is better)
Translates to: LAPPQVKIDRIQAALCAQWLSAV*FTGKEK
Trigger: CTTTTCTTTCCCTGTGAAGCATACAGCTGAGAGCCA...TTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR GCA 90 bp GAGGTAGAAACAGCTCTGTGCACAGTCTGTAGGGCTAGTGAGATCAAGATACATTGCAGTAGAAATTCATaGTGGCGAGCCCACTGCCGT +
Preference number: 2 (lower is better)
Translates to: EVETALCTVCRASEIKIHCSRNS*WRAHCR
Trigger: ACGGCAGTGGGCTCGCCAGCATGAATTTCTACTGCA...ATGTATCTTGATCTCACTAGCCCTACAGACTGTGCACAGAGCTGTTTCTACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR CCA 90 bp CTAGATCTTGCTCGGTTATGTGAGATTACAATTCACCGGTTTCCATCCTGTATGCAGCTCTTATCTACCTaGGCGGCACTGGTGCACCTC +
Preference number: 2 (lower is better)
Translates to: LDLARLCEITIHRFPSCMQLLST*AALVHL
Trigger: GAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTG...CATACAGGATGGAAACCGGTGAATTGTAATCTCACATAACCGAGCAAGATCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR TCA 90 bp TTAGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAAAATCAACTATCAATGTaGCCATTAGCTCCGCCACAA +
Preference number: 2 (lower is better)
Translates to: LAPPQVKIDRIQAALCAQNQLSM*PLAPPQ
Trigger: TTGTGGCGGAGCTAATGGTCACATTGATAGTTGATT...TTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR-3UTR TCA 90 bp GACCACGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAAGAGACTGCTGAGTGCTaGAAGGCCGTGGAACAAATG +
Preference number: 2 (lower is better)
Translates to: DHGLLPSLTPMFQQTEEKETAEC*KAVEQM
Trigger: CATTTGTTCCACGGCCTTTCAGCACTCAGCAGTCTC...TTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCGTGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR TCA 90 bp AATTCATTCATTTACCAAACACTTTCGAAGCACTACTTACTCTGGGCTGGCCTGCCAGAATGGCTTCGCTaGTCTGTAGCAGGAGACTGC +
Preference number: 2 (lower is better)
Translates to: NSFIYQTLSKHYLLWAGLPEWLR*SVAGDC
Trigger: GCAGTCTCCTGCTACAGATCAGCGAAGCCATTCTGG...CAGGCCAGCCCAGAGTAAGTAGTGCTTCGAAAGTGTTTGGTAAATGAATGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR TCA 90 bp AATTCATTCATTTACCAAACACTTTCGAAGCACTACTTACTCTGGGCTGGCCTGGGATGGAGCCACTCCTaGGGCTGGAGGGTTTACAAA +
Preference number: 2 (lower is better)
Translates to: NSFIYQTLSKHYLLWAGLGWSHS*GWRVYK
Trigger: TTTGTAAACCCTCCAGCCTCAGGAGTGGCTCCATCC...CAGGCCAGCCCAGAGTAAGTAGTGCTTCGAAAGTGTTTGGTAAATGAATGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR GCA 90 bp CCAGAACTGGGCTGGGTTACCATAATTCATTCATTTACCAAACACTTTCGAAGCGGCGCCTCCTCCACCTaGAGTAGAAATTCATGCTGG +
Preference number: 2 (lower is better)
Translates to: PELGWVTIIHSFTKHFRSGASST*SRNSCW
Trigger: CCAGCATGAATTTCTACTGCAGGTGGAGGAGGCGCC...GCTTCGAAAGTGTTTGGTAAATGAATGAATTATGGTAACCCAGCCCAGTTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR CCA 90 bp CTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAATTGACTTTTCTTTCTGCATCCATGTCCTaGTCTTCTTCTTCCTCTTCC +
Preference number: 2 (lower is better)
Translates to: LLFPLEGCPISTWELTFLSASMS*SSSSSS
Trigger: GGAAGAGGAAGAAGAAGACCAGGACATGGATGCAGA...AAGAAAAGTCAATTCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR CAA 90 bp CGAGGGCCCAGAACTACAACTCTGCAGCGAAAGATAGAGATGCCCTaGAAAATGTGTCACATTCTTAAGATGTCTTGCCGAAGTAGCAAG +
Preference number: 2 (lower is better)
Translates to: RGPRTTTLQRKIEMP*KMCHILKMSCRSSK
Trigger: CTTGCTACTTCGGCAAGACATCTTAAGAATGTGACACATTTTCAAGGGCATCTCTATCTTTCGCTGCAGAGTTGTAGTTCTGGGCCCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR CAA 90 bp CGTGTGTTAGCATCTCACCGTAACTTAATGCTTCGAGTGAGAAGTTaGAGGAATGCTGCTTTAGGCAAAAGAGCCACTGGAGGAATGAGC +
Preference number: 2 (lower is better)
Translates to: RVLASHRNLMLRVRS*RNAALGKRATGGMS
Trigger: GCTCATTCCTCCAGTGGCTCTTTTGCCTAAAGCAGCATTCCTCAAACTTCTCACTCGAAGCATTAAGTTACGGTGAGATGCTAACACACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR TCA 90 bp AATTCATTCATTTACCAAACACTTTCGAAGCACTACTTACTCTGGGCTGGCCTGGCAGGTGAAGAGTCGTaGCATCGCAAAAAGGACCAC +
Preference number: 2 (lower is better)
Translates to: NSFIYQTLSKHYLLWAGLAGEES*HRKKDH
Trigger: GTGGTCCTTTTTGCGATGTCACGACTCTTCACCTGC...CAGGCCAGCCCAGAGTAAGTAGTGCTTCGAAAGTGTTTGGTAAATGAATGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR TCA 90 bp GCCCATGTTCCAGCAAACCGAAGAAAAACACTGTTTCTTAAAACTGCAGAGGAAGCAGGTGAAGAGTCGTaGCATCGCAAAAAGGACCAC +
Preference number: 2 (lower is better)
Translates to: AHVPANRRKTLFLKTAEEAGEES*HRKKDH
Trigger: GTGGTCCTTTTTGCGATGTCACGACTCTTCACCTGC...TTCCTCTGCAGTTTTAAGAAACAGTGTTTTTCTTCGGTTTGCTGGAACATGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR-3UTR TCA 90 bp CCAGAACTGGGCTGGGTTACCATAATTCATTCATTTACCAAACACTTTCGAAGCCAAGATCTGAGTGACTaGGAGTGGGCAGGAGGGTTA +
Preference number: 2 (lower is better)
Translates to: PELGWVTIIHSFTKHFRSQDLSD*EWAGGL
Trigger: TAACCCTCCTGCCCACTCTCAGTCACTCAGATCTTG...GCTTCGAAAGTGTTTGGTAAATGAATGAATTATGGTAACCCAGCCCAGTTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR TCA 90 bp GCCCATGTTCCAGCAAACCGAAGAAAAACACTGTTTCTTAAAACTGCAGAGGAATCAGGGCTCTCTTCTTaGTCACGTCCCGCTGAATAC +
Preference number: 2 (lower is better)
Translates to: AHVPANRRKTLFLKTAEESGLSS*SRPAEY
Trigger: GTATTCAGCGGGACGTGATCAAGAAGAGAGCCCTGA...TTCCTCTGCAGTTTTAAGAAACAGTGTTTTTCTTCGGTTTGCTGGAACATGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR-3UTR GCA 90 bp TTGGGTGCAGATCCTAGGCGAGTCCATAAATTACCTGATTTCTTCTCCCGAGTAAAGCACAGTCAATGCTaGAGCTCTTATCTACCTGGG +
Preference number: 2 (lower is better)
Translates to: LGADPRRVHKLPDFFSRVKHSQC*SSYLPG
Trigger: CCCAGGTAGATAAGAGCTGCAGCATTGACTGTGCTT...TACTCGGGAGAAGAAATCAGGTAATTTATGGACTCGCCTAGGATCTGCACCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR-3UTR GCA 90 bp CCAGAACTGGGCTGGGTTACCATAATTCATTCATTTACCAAACACTTTCGAAGCGGAACACACAAAGTGTaGAGCCCTGTGCCCACATGT +
Preference number: 2 (lower is better)
Translates to: PELGWVTIIHSFTKHFRSGTHKV*SPVPTC
Trigger: ACATGTGGGCACAGGGCTGCACACTTTGTGTGTTCC...GCTTCGAAAGTGTTTGGTAAATGAATGAATTATGGTAACCCAGCCCAGTTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR GCA 90 bp AATTCATTCATTTACCAAACACTTTCGAAGCACTACTTACTCTGGGCTGGCCTGTCCAGTGTAGAGGTGTaGAGGGTTGTGGGGTACAGT +
Preference number: 2 (lower is better)
Translates to: NSFIYQTLSKHYLLWAGLSSVEV*RVVGYS
Trigger: ACTGTACCCCACAACCCTGCACACCTCTACACTGGA...CAGGCCAGCCCAGAGTAAGTAGTGCTTCGAAAGTGTTTGGTAAATGAATGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR CCA 90 bp AATTCATTCATTTACCAAACACTTTCGAAGCACTACTTACTCTGGGCTGGCCTGAAGCAGAGACTGTGCTaGGATGGGAATAAGCCCCTG +
Preference number: 2 (lower is better)
Translates to: NSFIYQTLSKHYLLWAGLKQRLC*DGNKPL
Trigger: CAGGGGCTTATTCCCATCCCAGCACAGTCTCTGCTT...CAGGCCAGCCCAGAGTAAGTAGTGCTTCGAAAGTGTTTGGTAAATGAATGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR TCA 90 bp CCAGAACTGGGCTGGGTTACCATAATTCATTCATTTACCAAACACTTTCGAAGCTCAAAGACCCAGTTTTaGCTGCACACCACCTCCTTC +
Preference number: 2 (lower is better)
Translates to: PELGWVTIIHSFTKHFRSSKTQF*LHTTSF
Trigger: GAAGGAGGTGGTGTGCAGTCAAAACTGGGTCTTTGA...GCTTCGAAAGTGTTTGGTAAATGAATGAATTATGGTAACCCAGCCCAGTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR TCA 90 bp TTAGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACTAATATTTTTCAACTaGGATTCCACTTCGTCAGCA +
Preference number: 2 (lower is better)
Translates to: LAPPQVKIDRIQAALCAQLIFFN*DSTSSA
Trigger: TGCTGACGAAGTGGAATCTCAGTTGAAAAATATTAG...TTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR-3UTR GCA 90 bp AGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACATTCTGCATTAATTCGTaGCACAGTGTAATCAACTAT +
Preference number: 2 (lower is better)
Translates to: SSATSKDRQDPGCTVCTTFCINS*HSVINY
Trigger: ATAGTTGATTACACTGTGGCACGAATTAATGCAGAA...TGTTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR-3UTR GCA 90 bp GACCACGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAAACACCTAGCCTACTATaGACATCAGAAGAGGGCTCT +
Preference number: 2 (lower is better)
Translates to: DHGLLPSLTPMFQQTEEKTPSLL*TSEEGS
Trigger: AGAGCCCTCTTCTGATGTGCATAGTAGGCTAGGTGT...TTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCGTGGTC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR-3UTR TCA 90 bp GCCCATGTTCCAGCAAACCGAAGAAAAACACTGTTTCTTAAAACTGCAGAGGAATGGAACAAATGGACCTaGGCTGCTGGTGTAAAACCA +
Preference number: 2 (lower is better)
Translates to: AHVPANRRKTLFLKTAEEWNKWT*AAGVKP
Trigger: TGGTTTTACACCAGCAGCTCAGGTCCATTTGTTCCA...TTCCTCTGCAGTTTTAAGAAACAGTGTTTTTCTTCGGTTTGCTGGAACATGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR TCA 90 bp CTAGATCTTGCTCGGTTATGTGAGATTACAATTCACCGGTTTCCATCCTGTATGACTGACCTTGGTAGGTaGAATACCGCCTATACTCTC +
Preference number: 2 (lower is better)
Translates to: LDLARLCEITIHRFPSCMTDLGR*NTAYTL
Trigger: GAGAGTATAGGCGGTATTTCACCTACCAAGGTCAGT...CATACAGGATGGAAACCGGTGAATTGTAATCTCACATAACCGAGCAAGATCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR GCA 90 bp CTAGATCTTGCTCGGTTATGTGAGATTACAATTCACCGGTTTCCATCCTGTATGAAACCGCCACTGAGATaGACCAACAAAGCCAGGAAT +
Preference number: 2 (lower is better)
Translates to: LDLARLCEITIHRFPSCMKPPLR*TNKARN
Trigger: ATTCCTGGCTTTGTTGGTGCATCTCAGTGGCGGTTT...CATACAGGATGGAAACCGGTGAATTGTAATCTCACATAACCGAGCAAGATCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR GCA 90 bp CTAGATCTTGCTCGGTTATGTGAGATTACAATTCACCGGTTTCCATCCTGTATGCACCACAAACTCTCCTaGCTTCAGCTCTTTTGGTGT +
Preference number: 2 (lower is better)
Translates to: LDLARLCEITIHRFPSCMHHKLS*LQLFWC
Trigger: ACACCAAAAGAGCTGAAGGCAGGAGAGTTTGTGGTG...CATACAGGATGGAAACCGGTGAATTGTAATCTCACATAACCGAGCAAGATCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CAA 90 bp GCCAAATTCCACTCGGATGCCTCACAACTACTTAAAATTGGCTTTTaGAAGCAGCATTTCCCTAACTACTCCCAGGAACAAAGTTCTGTG +
Preference number: 2 (lower is better)
Translates to: AKFHSDASQLLKIGF*KQHFPNYSQEQSSV
Trigger: CACAGAACTTTGTTCCTGGGAGTAGTTAGGGAAATGCTGCTTCAAAAAGCCAATTTTAAGTAGTTGTGAGGCATCCGAGTGGAATTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR GCA 90 bp GACCACGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAAATTCTTAAGATGTCTTaGCGAAGTAGCAAGAGCGGA +
Preference number: 2 (lower is better)
Translates to: DHGLLPSLTPMFQQTEEKILKMS*RSSKSG
Trigger: TCCGCTCTTGCTACTTCGGCAAGACATCTTAAGAAT...TTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCGTGGTC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR-3UTR GCA 90 bp GAGGTAGAAACAGCTCTGTGCACAGTCTGTAGGGCTAGTGAGATCAAGATACATGAAAATACCTGTCCCTaGAAAAACTTGTTCGGGAAT +
Preference number: 2 (lower is better)
Translates to: EVETALCTVCRASEIKIHENTCP*KNLFGN
Trigger: ATTCCCGAACAAGTTTTTGCAGGGACAGGTATTTTC...ATGTATCTTGATCTCACTAGCCCTACAGACTGTGCACAGAGCTGTTTCTACCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR GCA 90 bp CTAGATCTTGCTCGGTTATGTGAGATTACAATTCACCGGTTTCCATCCTGTATGGAAAAAGTGGCCAGGTaGACTTGTAGTCACAGTTAC +
Preference number: 2 (lower is better)
Translates to: LDLARLCEITIHRFPSCMEKVAR*TCSHSY
Trigger: GTAACTGTGACTACAAGTGCACCTGGCCACTTTTTC...CATACAGGATGGAAACCGGTGAATTGTAATCTCACATAACCGAGCAAGATCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR TCA 90 bp GACCACGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAACATGCTTTTCTTTGGTaGAGGCGTGGAAATCATTTT +
Preference number: 2 (lower is better)
Translates to: DHGLLPSLTPMFQQTEEKHAFLW*RRGNHF
Trigger: AAAATGATTTCCACGCCTTCACCAAAGAAAAGCATG...TTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCGTGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR-3UTR GCA 90 bp AATTCATTCATTTACCAAACACTTTCGAAGCACTACTTACTCTGGGCTGGCCTGGCAGCTCTCAAATCTTaGAGCCCTTTACTTCCTTTA +
Preference number: 2 (lower is better)
Translates to: NSFIYQTLSKHYLLWAGLAALKS*SPLLPL
Trigger: TAAAGGAAGTAAAGGGCTGCAAGATTTGAGAGCTGC...CAGGCCAGCCCAGAGTAAGTAGTGCTTCGAAAGTGTTTGGTAAATGAATGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR GCA 90 bp CTAGATCTTGCTCGGTTATGTGAGATTACAATTCACCGGTTTCCATCCTGTATGTTCTATTCTCCCACTTaGCTTCTGACTCTTAGGAAG +
Preference number: 2 (lower is better)
Translates to: LDLARLCEITIHRFPSCMFYSPT*LLTLRK
Trigger: CTTCCTAAGAGTCAGAAGGCAAGTGGGAGAATAGAA...CATACAGGATGGAAACCGGTGAATTGTAATCTCACATAACCGAGCAAGATCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR CCA 90 bp CCAGAACTGGGCTGGGTTACCATAATTCATTCATTTACCAAACACTTTCGAAGCGTCTTAAGTCTCAACTaGCAGAGAAACCAGAACCAT +
Preference number: 2 (lower is better)
Translates to: PELGWVTIIHSFTKHFRSVLSLN*QRNQNH
Trigger: ATGGTTCTGGTTTCTCTGCCAGTTGAGACTTAAGAC...GCTTCGAAAGTGTTTGGTAAATGAATGAATTATGGTAACCCAGCCCAGTTCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CAA 90 bp CCTGGACCAGAAAAACAACGGCTTTCAAAATCATTATTGGGACAGTaGGCAAATTTGAAACAGGAACTACAAATTAGCAACTCCTGGGCT +
Preference number: 2 (lower is better)
Translates to: PGPEKQRLSKSLLGQ*ANLKQELQISNSWA
Trigger: AGCCCAGGAGTTGCTAATTTGTAGTTCCTGTTTCAAATTTGCCAACTGTCCCAATAATGATTTTGAAAGCCGTTGTTTTTCTGGTCCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR CCA 90 bp GACCACGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAACTTTTTCCTAACCGCTaGCGTATATCTGATTTAGTA +
Preference number: 2 (lower is better)
Translates to: DHGLLPSLTPMFQQTEEKLFPNR*RISDLV
Trigger: TACTAAATCAGATATACGCCAGCGGTTAGGAAAAAG...TTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCGTGGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR-3UTR TCA 90 bp CTAGATCTTGCTCGGTTATGTGAGATTACAATTCACCGGTTTCCATCCTGTATGGTGATGGTGACAATTTaGGATAACACAAAGTCTCAA +
Preference number: 2 (lower is better)
Translates to: LDLARLCEITIHRFPSCMVMVTI*DNTKSQ
Trigger: TTGAGACTTTGTGTTATCTCAAATTGTCACCATCAC...CATACAGGATGGAAACCGGTGAATTGTAATCTCACATAACCGAGCAAGATCTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR CCA 90 bp CGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAACACTGCATGCCTCCATAATTTaGATTCCCATATTTCATGTA +
Preference number: 2 (lower is better)
Translates to: RFITISNAHVPANRRKTLHASII*IPIFHV
Trigger: TACATGAAATATGGGAATCCAAATTATGGAGGCATG...CAGTGTTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR-3UTR CCA 90 bp GCCCATGTTCCAGCAAACCGAAGAAAAACACTGTTTCTTAAAACTGCAGAGGAACGACTAACTTCAATCTaGAGAGATGGTAAGTTATCT +
Preference number: 2 (lower is better)
Translates to: AHVPANRRKTLFLKTAEERLTSI*RDGKLS
Trigger: AGATAACTTACCATCTCTCCAGATTGAAGTTAGTCG...TTCCTCTGCAGTTTTAAGAAACAGTGTTTTTCTTCGGTTTGCTGGAACATGGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR CAA 90 bp GAAAAACAACGGCTTTCAAAATCATTATTGGGACAGTTGGCAAATTaGAAACAGGAACTACAAATTAGCAACTCCTGGGCTGATCAGAGA +
Preference number: 2 (lower is better)
Translates to: EKQRLSKSLLGQLAN*KQELQISNSWADQR
Trigger: TCTCTGATCAGCCCAGGAGTTGCTAATTTGTAGTTCCTGTTTCAAATTTGCCAACTGTCCCAATAATGATTTTGAAAGCCGTTGTTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR CAA 90 bp CTAGGGTCCCGGAAGGGTGAGCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGACGCTCCCGGGGCTGCTaGAGAGCCGGGAGCTCCTCG +
Preference number: 3 (lower is better)
Translates to: LGSRKGELAASLLFPLEGRSRGC*RAGSSS
Trigger: CGAGGAGCTCCCGGCTCTCAAGCAGCCCCGGGAGCG...TCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGCTCACCCTTCCGGGACCCTAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR GCA 72 bp ACAAGAGGGCGGGCCCGGGCAAGCTCATGCCTCTGCTaGACCTGCGGCCTGCCTCAGTTCCCAAGCTCCCCA +
Preference number: 3 (lower is better)
Translates to: TRGRARASSCLC*TCGLPQFPSSP
Trigger: TGGGGAGCTTGGGAACTGAGGCAGGCCGCAGGTGCAGCAGAGGCATGAGCTTGCCCGGGCCCGCCCTCTTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR GCA 72 bp GCACTGGATCGTCTAGACGCGCTCCGCTCCCGGGGCTaGTTGAGAGCCGGGAGCTCCTCGTGGTACTCTACC +
Preference number: 3 (lower is better)
Translates to: ALDRLDALRSRG*LRAGSSSWYST
Trigger: GGTAGAGTACCACGAGGAGCTCCCGGCTCTCAAGCAGCCCCGGGAGCGGAGCGCGTCTAGACGATCCAGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR GCA 72 bp CGCGCCCTCAGTTGTCTCCCTGGCGCCTCCTCCACCTaGAGTAGAAATTCATGCTGGCGAGCCCACTGCCGT +
Preference number: 3 (lower is better)
Translates to: RALSCLPGASST*SRNSCWRAHCR
Trigger: ACGGCAGTGGGCTCGCCAGCATGAATTTCTACTGCAGGTGGAGGAGGCGCCAGGGAGACAACTGAGGGCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR CAA 90 bp ATGAGACACACAGGGGTCCGTAAAGCCCACCTGGCGGTAGCTGCTTTCCCCACACATGCGCGCCCTCAGTaGTCTCCCTGGCGCCTCCTC +
Preference number: 3 (lower is better)
Translates to: MRHTGVRKAHLAVAAFPTHARPQ*SPWRLL
Trigger: GAGGAGGCGCCAGGGAGACAACTGAGGGCGCGCATG...TGTGGGGAAAGCAGCTACCGCCAGGTGGGCTTTACGGACCCCTGTGTGTCTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 72 bp TGCTCACCATGTTGGCATCCTCCGGCCTCAGATCTGTaGGGGACTGCGGGGGTGATGGGACAGGGAGAGAAC +
Preference number: 3 (lower is better)
Translates to: CSPCWHPPASDL*GTAGVMGQGEN
Trigger: GTTCTCTCCCTGTCCCATCACCCCCGCAGTCCCCCACAGATCTGAGGCCGGAGGATGCCAACATGGTGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 72 bp TCAGGGTGCCTCGGGAAGCCAGGGAAAGCTGATGACTaGGTGCTGGACAGGGAGCAGGGCCACTTCTGTACC +
Preference number: 3 (lower is better)
Translates to: SGCLGKPGKADD*VLDREQGHFCT
Trigger: GGTACAGAAGTGGCCCTGCTCCCTGTCCAGCACCCAGTCATCAGCTTTCCCTGGCTTCCCGAGGCACCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR TCA 72 bp CAGCTCTTATCTACCTGGGCGGCACTGGTGCACCTCTaGGGTCAGGTCCGTGAGATTCGCCCCACACTAGGG +
Preference number: 3 (lower is better)
Translates to: QLLSTWAALVHL*GQVREIRPTLG
Trigger: CCCTAGTGTGGGGCGAATCTCACGGACCTGACCTCAGAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR TCA 72 bp CTGGTAACAGCCCACTCAACTGCTAGACGGGAAAACTaGGGCCCAGGTCCATGGAGCAGAGCCAGGGGTTGG +
Preference number: 3 (lower is better)
Translates to: LVTAHSTARREN*GPGPWSRARGW
Trigger: CCAACCCCTGGCTCTGCTCCATGGACCTGGGCCTCAGTTTTCCCGTCTAGCAGTTGAGTGGGCTGTTACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR TCA 72 bp AGCCCAGGGCTGCAGAGCAGTGGTACTCACGACCTTTaGACACTCGGTAGGAGTGCCCTGCTCAGTGCCAAG +
Preference number: 3 (lower is better)
Translates to: SPGLQSSGTHDL*TLGRSALLSAK
Trigger: CTTGGCACTGAGCAGGGCACTCCTACCGAGTGTTCAAAGGTCGTGAGTACCACTGCTCTGCAGCCCTGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR GCA 72 bp CAATGCTGCAGCTCTTATCTACCTGGGCGGCACTGGTaGACCTCTGAGGTCAGGTCCGTGAGATTCGCCCCA +
Preference number: 3 (lower is better)
Translates to: QCCSSYLPGRHW*TSEVRSVRFAP
Trigger: TGGGGCGAATCTCACGGACCTGACCTCAGAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTGCAGCATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR CCA 72 bp CCTGGCGCCTCCTCCACCTGCAGTAGAAATTCATGCTaGCGAGCCCACTGCCGTCACAGCTTGGGAAGAGTA +
Preference number: 3 (lower is better)
Translates to: PGASSTCSRNSC*RAHCRHSLGRV
Trigger: TACTCTTCCCAAGCTGTGACGGCAGTGGGCTCGCCAGCATGAATTTCTACTGCAGGTGGAGGAGGCGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 72 bp CATTCTGCGCTCCAAGGGCACTGGGGAGAGTCACAGTaGTCTCCTCTCCCCCGCATTGGCCTAAAGCAGGAA +
Preference number: 3 (lower is better)
Translates to: HSALQGHWGESQ*SPLPRIGLKQE
Trigger: TTCCTGCTTTAGGCCAATGCGGGGGAGAGGAGACCACTGTGACTCTCCCCAGTGCCCTTGGAGCGCAGAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR CAA 90 bp CTAGGGTCCCGGAAGGGTGAGCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGCAGCTCTCAAATCTaGCAGCCCTTTACTTCCTTT +
Preference number: 3 (lower is better)
Translates to: LGSRKGELAASLLFPLEGCSSQI*QPFTSF
Trigger: AAAGGAAGTAAAGGGCTGCAAGATTTGAGAGCTGCA...TCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGCTCACCCTTCCGGGACCCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR GCA 72 bp CAATCCCCGAGGGAAGAACGGAAGCACAGTCAATGCTaGAGCTCTTATCTACCTGGGCGGCACTGGTGCACC +
Preference number: 3 (lower is better)
Translates to: QSPREERKHSQC*SSYLPGRHWCT
Trigger: GGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTGCAGCATTGACTGTGCTTCCGTTCTTCCCTCGGGGATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR GCA 72 bp GAGCAATCCCCGAGGGAAGAACGGAAGCACAGTCAATaGTGCAGCTCTTATCTACCTGGGCGGCACTGGTGC +
Preference number: 3 (lower is better)
Translates to: EQSPREERKHSQ*CSSYLPGRHWC
Trigger: GCACCAGTGCCGCCCAGGTAGATAAGAGCTGCAGCATTGACTGTGCTTCCGTTCTTCCCTCGGGGATTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR CCA 72 bp AGTCAATGCTGCAGCTCTTATCTACCTGGGCGGCACTaGTGCACCTCTGAGGTCAGGTCCGTGAGATTCGCC +
Preference number: 3 (lower is better)
Translates to: SQCCSSYLPGRH*CTSEVRSVRFA
Trigger: GGCGAATCTCACGGACCTGACCTCAGAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTGCAGCATTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR CCA 72 bp GAACACACAAAGTGTGCAGCCCTGTGCCCACATGTGTaGGGAGTGTCCAGGGTAAAATCACGCCCAGCTGCC +
Preference number: 3 (lower is better)
Translates to: EHTKCAALCPHV*GVSRVKSRPAA
Trigger: GGCAGCTGGGCGTGATTTTACCCTGGACACTCCCCACACATGTGGGCACAGGGCTGCACACTTTGTGTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR TCA 72 bp CCAAACTACATCCCCAAGGTCAGGGCCAGGCTCTGTTaGGTAATGCTCCCCATCACAGCACGCAGCACAAGG +
Preference number: 3 (lower is better)
Translates to: PNYIPKVRARLC*VMLPITARSTR
Trigger: CCTTGTGCTGCGTGCTGTGATGGGGAGCATTACTCAACAGAGCCTGGCCCTGACCTTGGGGATGTAGTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR GCA 72 bp AGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTaGACTGTGTGCACAACAGCCCAGGCAGGTGAAGAG +
Preference number: 3 (lower is better)
Translates to: SSATSKDRQDPG*TVCTTAQAGEE
Trigger: CTCTTCACCTGCCTGGGCTGTTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR GCA 72 bp GGTGCTGGACAGGGAGCAGGGCCACTTCTGTACCTCTaGACACTTCTAGAATGCGGACTCATCCTGCATCCA +
Preference number: 3 (lower is better)
Translates to: GAGQGAGPLLYL*TLLECGLILHP
Trigger: TGGATGCAGGATGAGTCCGCATTCTAGAAGTGTGCAGAGGTACAGAAGTGGCCCTGCTCCCTGTCCAGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR CAA 90 bp GCTGCAGCTCTTATCTACCTGGGCGGCACTGGTGCACCTCTGAGGTCAGGTCCGTGCAGCTCTCAAATCTaGCAGCCCTTTACTTCCTTT +
Preference number: 3 (lower is better)
Translates to: AAALIYLGGTGAPLRSGPCSSQI*QPFTSF
Trigger: AAAGGAAGTAAAGGGCTGCAAGATTTGAGAGCTGCA...CGGACCTGACCTCAGAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR-3UTR CAA 90 bp AGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACACACTGCCGTCACAGCTaGGGAAGAGTAAACCGCCAC +
Preference number: 3 (lower is better)
Translates to: SSATSKDRQDPGCTVCTTHCRHS*GRVNRH
Trigger: GTGGCGGTTTACTCTTCCCAAGCTGTGACGGCAGTG...TGTTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR TCA 72 bp CACATCAAGCTGACAGCACGTAAGAGGCCCATGCCATaGGCAATCCCCGAGGGAAGAACGGAAGCACAGTCA +
Preference number: 3 (lower is better)
Translates to: HIKLTARKRPMP*AIPEGRTEAQS
Trigger: TGACTGTGCTTCCGTTCTTCCCTCGGGGATTGCTCATGGCATGGGCCTCTTACGTGCTGTCAGCTTGATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR TCA 72 bp TCCAGGCTGCACTGTGTGCACAACAGCCCAGGCAGGTaGAGAGTCGTGACATCGCAAAAAGGACCACGGTTT +
Preference number: 3 (lower is better)
Translates to: SRLHCVHNSPGR*RVVTSQKGPRF
Trigger: AAACCGTGGTCCTTTTTGCGATGTCACGACTCTTCACCTGCCTGGGCTGTTGTGCACACAGTGCAGCCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR TCA 72 bp CCCCTGATGCTCCCCGGAAAGGAGAGCAAGGATCCTTaGACACGCGTTAGCACTAGAAGGAAACTGGAGCTC +
Preference number: 3 (lower is better)
Translates to: PLMLPGKESKDP*TRVSTRRKLEL
Trigger: GAGCTCCAGTTTCCTTCTAGTGCTAACGCGTGTTCAAGGATCCTTGCTCTCCTTTCCGGGGAGCATCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR GCA 72 bp TCCCATCTTTACAGAAGACCTGCTAGATGCCAGGCATaGTGGCAGGCACAGGGGAAAGCCCACTCAACAAGC +
Preference number: 3 (lower is better)
Translates to: SHLYRRPARCQA*WQAQGKAHSTS
Trigger: GCTTGTTGAGTGGGCTTTCCCCTGTGCCTGCCAGCATGCCTGGCATCTAGCAGGTCTTCTGTAAAGATGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR GCA 72 bp AACTGGCTCAGCAGTCCTTCTTTAGGGTCTAGCGCCTaGCTACCAGCTTCCTCTACTTCTATCCCGGGACAG +
Preference number: 3 (lower is better)
Translates to: NWLSSPSLGSSA*LPASSTSIPGQ
Trigger: CTGTCCCGGGATAGAAGTAGAGGAAGCTGGTAGGCAGGCGCTAGACCCTAAAGAAGGACTGCTGAGCCAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR GCA 72 bp CCTTTACTATCCTGCCTGGGAACACCTAGCCTACTATaGACATCAGAAGAGGGCTCTCTCCGAACGACGGGG +
Preference number: 3 (lower is better)
Translates to: PLLSCLGTPSLL*TSEEGSLRTTG
Trigger: CCCCGTCGTTCGGAGAGAGCCCTCTTCTGATGTGCATAGTAGGCTAGGTGTTCCCAGGCAGGATAGTAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR CCA 72 bp GCTGCACTGGGTGCTGGGACCAAGGGTCCAGGGGCTTaGATCTCTTGTTTACAAACCCCTACTTCTTTCCTG +
Preference number: 3 (lower is better)
Translates to: AALGAGTKGPGA*ISCLQTPTSFL
Trigger: CAGGAAAGAAGTAGGGGTTTGTAAACAAGAGATCCAAGCCCCTGGACCCTTGGTCCCAGCACCCAGTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR CAA 90 bp GGGGGAGGTTCCTACTGCGCGCCCCACCCTGTGCAAGAATGTCAGGCTTTAGGGATAAGCACCTGGGAATaGACTTTTCTTGGGAAAAGG +
Preference number: 3 (lower is better)
Translates to: GGGSYCAPHPVQECQALGISTWE*TFLGKR
Trigger: CCTTTTCCCAAGAAAAGTCAATTCCCAGGTGCTTAT...CCCTAAAGCCTGACATTCTTGCACAGGGTGGGGCGCGCAGTAGGAACCTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR-3UTR CAA 90 bp GAGAGCAGCCCAGTCACTGAGCAGATCCCTGCTAGGGCAGGGCTAGAACCCAGAAGAAAAACAAATCAGTaGTTTGGGCCATTCCGCTGG +
Preference number: 3 (lower is better)
Translates to: ESSPVTEQIPARAGLEPRRKTNQ*FGPFRW
Trigger: CCAGCGGAATGGCCCAAACAACTGATTTGTTTTTCT...TCTGGGTTCTAGCCCTGCCCTAGCAGGGATCTGCTCAGTGACTGGGCTGCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR CAA 90 bp CTAGGGTCCCGGAAGGGTGAGCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATTCTCAGGTGGTAATTaGTTACCAATTCGGTTTTTG +
Preference number: 3 (lower is better)
Translates to: LGSRKGELAASLLFPLEGFSGGN*LPIRFL
Trigger: CAAAAACCGAATTGGTAACAAATTACCACCTGAGAA...TCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGCTCACCCTTCCGGGACCCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR TCA 72 bp ATTCTAAACCCTGCAGAGGCATGCCAGCTGGGACGCTaGCCACAAGACATCTTTGCCCCGTCAGTAGAAGCA +
Preference number: 3 (lower is better)
Translates to: ILNPAEACQLGR*PQDIFAPSVEA
Trigger: TGCTTCTACTGACGGGGCAAAGATGTCTTGTGGTCAGCGTCCCAGCTGGCATGCCTCTGCAGGGTTTAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR GCA 72 bp CAGGGGAAAGCCCACTCAACAAGCAGACACGGTCCCTaGTCTCACGGAGCTTACAGTCTAGCAAGACAAACT +
Preference number: 3 (lower is better)
Translates to: QGKAHSTSRHGP*SHGAYSLARQT
Trigger: AGTTTGTCTTGCTAGACTGTAAGCTCCGTGAGAGCAGGGACCGTGTCTGCTTGTTGAGTGGGCTTTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 72 bp AAGAGGCTGCTGTACAAATGCAGCTGGAAAGGGCAGTaGCTGAAGAACGGAGAGGGGTTCACAGGATCAGAC +
Preference number: 3 (lower is better)
Translates to: KRLLYKCSWKGQ*LKNGEGFTGSD
Trigger: GTCTGATCCTGTGAACCCCTCTCCGTTCTTCAGCCACTGCCCTTTCCAGCTGCATTTGTACAGCAGCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 72 bp CATCTTTACAGAAGACCTGCTAGATGCCAGGCATGCTaGCAGGCACAGGGGAAAGCCCACTCAACAAGCAGA +
Preference number: 3 (lower is better)
Translates to: HLYRRPARCQAC*QAQGKAHSTSR
Trigger: TCTGCTTGTTGAGTGGGCTTTCCCCTGTGCCTGCCAGCATGCCTGGCATCTAGCAGGTCTTCTGTAAAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 72 bp CCTCTGAGAGGCCACATAGCTAGTAAGGAGCAGAGCTaGGACTCCAAACAGGCCTGTTTCCTCCAGAATCAG +
Preference number: 3 (lower is better)
Translates to: PLRGHIASKEQS*DSKQACFLQNQ
Trigger: CTGATTCTGGAGGAAACAGGCCTGTTTGGAGTCCCAGCTCTGCTCCTTACTAGCTATGTGGCCTCTCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 72 bp AGCTCACTCGAGATTCCTGAGAGAAGACTTTGTGTTTaGAGTGTGAACGTCAGGGTGCCTCGGGAAGCCAGG +
Preference number: 3 (lower is better)
Translates to: SSLEIPERRLCV*SVNVRVPREAR
Trigger: CCTGGCTTCCCGAGGCACCCTGACGTTCACACTCCAAACACAAAGTCTTCTCTCAGGAATCTCGAGTGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 72 bp CCCGAGTATCGGCGTAGAGGCCTTTACTATCCTGCCTaGGAACACCTAGCCTACTATGCACATCAGAAGAGG +
Preference number: 3 (lower is better)
Translates to: PEYRRRGLYYPA*EHLAYYAHQKR
Trigger: CCTCTTCTGATGTGCATAGTAGGCTAGGTGTTCCCAGGCAGGATAGTAAAGGCCTCTACGCCGATACTCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR-3UTR CAA 90 bp GGGGGAGGTTCCTACTGCGCGCCCCACCCTGTGCAAGAATGTCAGGCTTTAGGGAGACGTCACAGTTTTTaGTTCCTAAAAATCCCACAG +
Preference number: 3 (lower is better)
Translates to: GGGSYCAPHPVQECQALGRRHSF*FLKIPQ
Trigger: CTGTGGGATTTTTAGGAACAAAAAACTGTGACGTCT...CCCTAAAGCCTGACATTCTTGCACAGGGTGGGGCGCGCAGTAGGAACCTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR-3UTR CAA 90 bp GGGGGAGGTTCCTACTGCGCGCCCCACCCTGTGCAAGAATGTCAGGCTTTAGGGCTTCGCTTCCATGAATaGCTAAGAATTCCTTTCATG +
Preference number: 3 (lower is better)
Translates to: GGGSYCAPHPVQECQALGLRFHE*LRIPFM
Trigger: CATGAAAGGAATTCTTAGCAATTCATGGAAGCGAAG...CCCTAAAGCCTGACATTCTTGCACAGGGTGGGGCGCGCAGTAGGAACCTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR TCA 72 bp CCTGGTCATCCAGAGAGGGCCCCGGAATTGCTCAAATaGACAGTAAGAATCCTGAGGCAGGGTACTGACCTT +
Preference number: 3 (lower is better)
Translates to: PGHPERAPELLK*TVRILRQGTDL
Trigger: AAGGTCAGTACCCTGCCTCAGGATTCTTACTGTTCATTTGAGCAATTCCGGGGCCCTCTCTGGATGACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR GCA 72 bp CCGTCACAGCTTGGGAAGAGTAAACCGCCACTGAGATaGACCAACAAAGCCAGGAATTCTGGTAACAGCCCA +
Preference number: 3 (lower is better)
Translates to: PSQLGKSKPPLR*TNKARNSGNSP
Trigger: TGGGCTGTTACCAGAATTCCTGGCTTTGTTGGTGCATCTCAGTGGCGGTTTACTCTTCCCAAGCTGTGACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR GCA 72 bp CTCCTACACATAAGACTAAGAGGAACACACAAAGTGTaGAGCCCTGTGCCCACATGTGTGGGGAGTGTCCAG +
Preference number: 3 (lower is better)
Translates to: LLHIRLRGTHKV*SPVPTCVGSVQ
Trigger: CTGGACACTCCCCACACATGTGGGCACAGGGCTGCACACTTTGTGTGTTCCTCTTAGTCTTATGTGTAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR GCA 72 bp CCAAGAAAAGCCTACGTGAATAAGACAGCAAGAGGGTaGTCACCATGTTGGCATCCTCCGGCCTCAGATCTG +
Preference number: 3 (lower is better)
Translates to: PRKAYVNKTARG*SPCWHPPASDL
Trigger: CAGATCTGAGGCCGGAGGATGCCAACATGGTGAGCACCCTCTTGCTGTCTTATTCACGTAGGCTTTTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 72 bp CTGCCTTTTTCTCAAAGGGTAAAGCCTGTGGGGTGGTaGGAAAGGAATCGAGGGCCCAGAACTACAACTCTG +
Preference number: 3 (lower is better)
Translates to: LPFSQRVKPVGW*ERNRGPRTTTL
Trigger: CAGAGTTGTAGTTCTGGGCCCTCGATTCCTTTCCCACCACCCCACAGGCTTTACCCTTTGAGAAAAAGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR-3UTR CAA 90 bp GAGAGCAGCCCAGTCACTGAGCAGATCCCTGCTAGGGCAGGGCTAGAACCCAGAAAAAATTCTTCAACATaGACCCATAATCCCACCCCA +
Preference number: 3 (lower is better)
Translates to: ESSPVTEQIPARAGLEPRKNSST*THNPTP
Trigger: TGGGGTGGGATTATGGGTCAATGTTGAAGAATTTTT...TCTGGGTTCTAGCCCTGCCCTAGCAGGGATCTGCTCAGTGACTGGGCTGCTCTC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR TCA 72 bp CACTGCCGTCACAGCTTGGGAAGAGTAAACCGCCACTaGGATGCACCAACAAAGCCAGGAATTCTGGTAACA +
Preference number: 3 (lower is better)
Translates to: HCRHSLGRVNRH*DAPTKPGILVT
Trigger: TGTTACCAGAATTCCTGGCTTTGTTGGTGCATCTCAGTGGCGGTTTACTCTTCCCAAGCTGTGACGGCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR TCA 72 bp ACTGGAACCCTCGCACACTGCTGGTGGAATGGAAAATaGTACAGCTGCTTGGAAAAACCACCTGGTGGTTCC +
Preference number: 3 (lower is better)
Translates to: TGTLAHCWWNGK*YSCLEKPPGGS
Trigger: GGAACCACCAGGTGGTTTTTCCAAGCAGCTGTATCATTTTCCATTCCACCAGCAGTGTGCGAGGGTTCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR TCA 72 bp AAGGAGGCTGCAGAGAGGACAACTAAAGGCAGCGCTTaGTCCTGGATTGGATCCTGGACCAGAAAAACAACG +
Preference number: 3 (lower is better)
Translates to: KEAAERTTKGSA*SWIGSWTRKTT
Trigger: CGTTGTTTTTCTGGTCCAGGATCCAATCCAGGATCAAGCGCTGCCTTTAGTTGTCCTCTCTGCAGCCTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR TCA 72 bp TTAGTACTGCTGACTGGTGGCCGTGGACGGGAGTGCTaGCGTTTCTCATCTAATAGATGTCGGACATCTGCA +
Preference number: 3 (lower is better)
Translates to: LVLLTGGRGREC*RFSSNRCRTSA
Trigger: TGCAGATGTCCGACATCTATTAGATGAGAAACGTCAGCACTCCCGTCCACGGCCACCAGTCAGCAGTACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR CCA 72 bp AGGATCCTTGAACACGCGTTAGCACTAGAAGGAAACTaGAGCTCACCCCAGTTGAGCCCTCCATTTGACAGA +
Preference number: 3 (lower is better)
Translates to: RILEHALALEGN*SSPQLSPPFDR
Trigger: TCTGTCAAATGGAGGGCTCAACTGGGGTGAGCTCCAGTTTCCTTCTAGTGCTAACGCGTGTTCAAGGATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR TCA 72 bp AATCCCACAGCACTGAACTTGATCTTCACATCAAGCTaGCAGCACGTAAGAGGCCCATGCCATGAGCAATCC +
Preference number: 3 (lower is better)
Translates to: NPTALNLIFTSS*QHVRGPCHEQS
Trigger: GGATTGCTCATGGCATGGGCCTCTTACGTGCTGTCAGCTTGATGTGAAGATCAAGTTCAGTGCTGTGGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR TCA 72 bp ACTGTGTGCACAACAGCCCAGGCAGGTGAAGAGTCGTaGCATCGCAAAAAGGACCACGGTTTATTACCATCT +
Preference number: 3 (lower is better)
Translates to: TVCTTAQAGEES*HRKKDHGLLPS
Trigger: AGATGGTAATAAACCGTGGTCCTTTTTGCGATGTCACGACTCTTCACCTGCCTGGGCTGTTGTGCACACAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR GCA 72 bp GGCGGAAGCATGTCACTGGAGGTAGAAACAGCTCTGTaGACAGTCTGTAGGGCTAGTGAGATCAAGATACAT +
Preference number: 3 (lower is better)
Translates to: GGSMSLEVETAL*TVCRASEIKIH
Trigger: ATGTATCTTGATCTCACTAGCCCTACAGACTGTGCACAGAGCTGTTTCTACCTCCAGTGACATGCTTCCGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 72 bp TGGAGAAACTGGAACCCTCGCACACTGCTGGTGGAATaGAAAATGATACAGCTGCTTGGAAAAACCACCTGG +
Preference number: 3 (lower is better)
Translates to: WRNWNPRTLLVE*KMIQLLGKTTW
Trigger: CCAGGTGGTTTTTCCAAGCAGCTGTATCATTTTCCATTCCACCAGCAGTGTGCGAGGGTTCCAGTTTCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR CAA 90 bp TTTTCTCAAAGGGTAAAGCCTGTGGGGTGGTGGGAAAGGAATCGAGGGCCCAGAATAAGCACCTGGGAATaGACTTTTCTTGGGAAAAGG +
Preference number: 3 (lower is better)
Translates to: FSQRVKPVGWWERNRGPRISTWE*TFLGKR
Trigger: CCTTTTCCCAAGAAAAGTCAATTCCCAGGTGCTTAT...TCTGGGCCCTCGATTCCTTTCCCACCACCCCACAGGCTTTACCCTTTGAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR-3UTR CAA 90 bp CCCGAGTATCGGCGTAGAGGCCTTTACTATCCTGCCTGGGAACACCTAGCCTACTCATGCCTCCATAATTaGGATTCCCATATTTCATGT +
Preference number: 3 (lower is better)
Translates to: PEYRRRGLYYPAWEHLAYSCLHN*DSHISC
Trigger: ACATGAAATATGGGAATCCAAATTATGGAGGCATGA...GTAGGCTAGGTGTTCCCAGGCAGGATAGTAAAGGCCTCTACGCCGATACTCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR GCA 72 bp CCCACAAATGCAGACTGGGATCTCCACATGACCAGGTaGTGTGGACTGAACTGTAAATGTCCTCCAAATTCA +
Preference number: 3 (lower is better)
Translates to: PTNADWDLHMTR*CGLNCKCPPNS
Trigger: TGAATTTGGAGGACATTTACAGTTCAGTCCACAGCACCTGGTCATGTGGAGATCCCAGTCTGCATTTGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR GCA 72 bp GCAGGGCCACTTCTGTACCTCTGCACACTTCTAGAATaGGGACTCATCCTGCATCCATCCAGTATGTATTTA +
Preference number: 3 (lower is better)
Translates to: AGPLLYLCTLLE*GLILHPSSMYL
Trigger: TAAATACATACTGGATGGATGCAGGATGAGTCCGCATTCTAGAAGTGTGCAGAGGTACAGAAGTGGCCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 72 bp AGGATGTCCAATAAGCACCTGGGAATTGACTTTTCTTaGGAAAAGGGTGCTGGTAACAGCTGTCAGGGCCAA +
Preference number: 3 (lower is better)
Translates to: RMSNKHLGIDFS*EKGAGNSCQGQ
Trigger: TTGGCCCTGACAGCTGTTACCAGCACCCTTTTCCCAAGAAAAGTCAATTCCCAGGTGCTTATTGGACATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR CCA 72 bp AAGTTTGAGGAATGCTGCTTTAGGCAAAAGAGCCACTaGAGGAATGAGCTCTGCTCTTTTCACCTGCTCTGG +
Preference number: 3 (lower is better)
Translates to: KFEECCFRQKSH*RNELCSFHLLW
Trigger: CCAGAGCAGGTGAAAAGAGCAGAGCTCATTCCTCCAGTGGCTCTTTTGCCTAAAGCAGCATTCCTCAAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 72 bp TGGAGAGATGGTAAGTTATCTAACCGGCTCTTCTTTTaGCGAGACTGCTCTTTCTCCTTAATCAGAGCCCCC +
Preference number: 3 (lower is better)
Translates to: WRDGKLSNRLFF*RDCSFSLIRAP
Trigger: GGGGGCTCTGATTAAGGAGAAAGAGCAGTCTCGCCAAAAGAAGAGCCGGTTAGATAACTTACCATCTCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR TCA 72 bp CTTCACAAACATCAATGTCATGAAAGACAGAAAGGCTaGGGACCTGCTCCAAACGAAAGGAGGCTGCAGAGA +
Preference number: 3 (lower is better)
Translates to: LHKHQCHERQKG*GPAPNERRLQR
Trigger: TCTCTGCAGCCTCCTTTCGTTTGGAGCAGGTCCTCAGCCTTTCTGTCTTTCATGACATTGATGTTTGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 72 bp AGATACCACTTCACACCAGAAAATAATGAGTGTTGGTaGAGATGTGGAGAAACTGGAACCCTCGCACACTGC +
Preference number: 3 (lower is better)
Translates to: RYHFTPENNECW*RCGETGTLAHC
Trigger: GCAGTGTGCGAGGGTTCCAGTTTCTCCACATCTCCACCAACACTCATTATTTTCTGGTGTGAAGTGGTATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR TCA 72 bp GTCCAGTGTAGAGGTGTGCAGGGTTGTGGGGTACAGTaGTTTGGCATTATACACACATTTCGCTTAAACACA +
Preference number: 3 (lower is better)
Translates to: VQCRGVQGCGVQ*FGIIHTFRLNT
Trigger: TGTGTTTAAGCGAAATGTGTGTATAATGCCAAATCACTGTACCCCACAACCCTGCACACCTCTACACTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR GCA 72 bp CCAAAACAAGTGATTTTTGCACAACACAGCCCTAACTaGAGGCCAATCACTTCACCTGGTACTCAACCAAAC +
Preference number: 3 (lower is better)
Translates to: PKQVIFAQHSPN*RPITSPGTQPN
Trigger: GTTTGGTTGAGTACCAGGTGAAGTGATTGGCCTGCAGTTAGGGCTGTGTTGTGCAAAAATCACTTGTTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 72 bp AGTAATGTGTTCCCACATGGGCAAGAAATGACTACATaGGACCTCAAGATGTTGGTCTTCAATAGGGCACCT +
Preference number: 3 (lower is better)
Translates to: SNVFPHGQEMTT*DLKMLVFNRAP
Trigger: AGGTGCCCTATTGAAGACCAACATCTTGAGGTCCCATGTAGTCATTTCTTGCCCATGTGGGAACACATTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR CAA 90 bp GCCCATGTTCCAGCAAACCGAAGAAAAACACTGTTTCTTAAAACTGCAGAGGAAAAAAGACGACACCACTaGAGCTTCCCCTTTAGCCAA +
Preference number: 3 (lower is better)
Translates to: AHVPANRRKTLFLKTAEEKRRHH*SFPFSQ
Trigger: TTGGCTAAAGGGGAAGCTCAAGTGGTGTCGTCTTTT...TTCCTCTGCAGTTTTAAGAAACAGTGTTTTTCTTCGGTTTGCTGGAACATGGGC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR-3UTR CAA 90 bp GCCCATGTTCCAGCAAACCGAAGAAAAACACTGTTTCTTAAAACTGCAGAGGAAATCAAAGACCCAGTTTaGACTGCACACCACCTCCTT +
Preference number: 3 (lower is better)
Translates to: AHVPANRRKTLFLKTAEEIKDPV*TAHHLL
Trigger: AAGGAGGTGGTGTGCAGTCAAAACTGGGTCTTTGAT...TTCCTCTGCAGTTTTAAGAAACAGTGTTTTTCTTCGGTTTGCTGGAACATGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR CAA 90 bp CTAGATCTTGCTCGGTTATGTGAGATTACAATTCACCGGTTTCCATCCTGTATGCATAATCCAGCAAGATaGGTGGCCTTACAAGAGCCA +
Preference number: 3 (lower is better)
Translates to: LDLARLCEITIHRFPSCMHNPAR*VALQEP
Trigger: TGGCTCTTGTAAGGCCACCAATCTTGCTGGATTATG...CATACAGGATGGAAACCGGTGAATTGTAATCTCACATAACCGAGCAAGATCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR TCA 72 bp GTTCAAGCTACTTGGGAAAGCTTGAGCCCAGGAGTTTaGGTCCAATCTAGACAACATAGTATGAACCTGTCT +
Preference number: 3 (lower is better)
Translates to: VQATWESLSPGV*VQSRQHSMNLS
Trigger: AGACAGGTTCATACTATGTTGTCTAGATTGGACTCAAACTCCTGGGCTCAAGCTTTCCCAAGTAGCTTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR TCA 72 bp TTTCTCGCATTGAAAGGCTGCTTGGCTAAGGTTCTGTaGAGATCCGATGACATTTCCAACACTTTGCCTTGT +
Preference number: 3 (lower is better)
Translates to: FLALKGCLAKVL*RSDDISNTLPC
Trigger: ACAAGGCAAAGTGTTGGAAATGTCATCGGATCTTCACAGAACCTTAGCCAAGCAGCCTTTCAATGCGAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR GCA 72 bp ACTAGGAACAAGAAATTACAGTCCAGTGTAGAGGTGTaGAGGGTTGTGGGGTACAGTGATTTGGCATTATAC +
Preference number: 3 (lower is better)
Translates to: TRNKKLQSSVEV*RVVGYSDLALY
Trigger: GTATAATGCCAAATCACTGTACCCCACAACCCTGCACACCTCTACACTGGACTGTAATTTCTTGTTCCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 72 bp TTTGAGATAACACAAAGTCTCAACTATTTACGAACCTaGTCATCCAGAGAGGGCCCCGGAATTGCTCAAATG +
Preference number: 3 (lower is better)
Translates to: FEITQSLNYLRT*SSREGPGIAQM
Trigger: CATTTGAGCAATTCCGGGGCCCTCTCTGGATGACCAGGTTCGTAAATAGTTGAGACTTTGTGTTATCTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 72 bp TTAAGGTTAGATGAGGTCATAATCCAGCAAGATTGGTaGCCTTACAAGAGCCATGTGCAGGCACCAAGAAAA +
Preference number: 3 (lower is better)
Translates to: LRLDEVIIQQDW*PYKSHVQAPRK
Trigger: TTTTCTTGGTGCCTGCACATGGCTCTTGTAAGGCCACCAATCTTGCTGGATTATGACCTCATCTAACCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 72 bp TCTGAACCAGAGCTGCTTTCCCGACTAACTTCAATCTaGAGAGATGGTAAGTTATCTAACCGGCTCTTCTTT +
Preference number: 3 (lower is better)
Translates to: SEPELLSRLTSI*RDGKLSNRLFF
Trigger: AAAGAAGAGCCGGTTAGATAACTTACCATCTCTCCAGATTGAAGTTAGTCGGGAAAGCAGCTCTGGTTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR-3UTR CAA 90 bp GAGCTGCTTTCCCGACTAACTTCAATCTGGAGAGATGGTAAGTTATCTAACCGGAAAAATTCTTCAACATaGACCCATAATCCCACCCCA +
Preference number: 3 (lower is better)
Translates to: ELLSRLTSIWRDGKLSNRKNSST*THNPTP
Trigger: TGGGGTGGGATTATGGGTCAATGTTGAAGAATTTTT...CCGGTTAGATAACTTACCATCTCTCCAGATTGAAGTTAGTCGGGAAAGCAGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR-3UTR CAA 90 bp GACCACGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAATCTTTTCTGCCAATTTaGAAGATGTCTTCAGGTGCC +
Preference number: 3 (lower is better)
Translates to: DHGLLPSLTPMFQQTEEKSFLPI*KMSSGA
Trigger: GGCACCTGAAGACATCTTCAAAATTGGCAGAAAAGA...TTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCGTGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR-3UTR CAA 90 bp GAGCTGCTTTCCCGACTAACTTCAATCTGGAGAGATGGTAAGTTATCTAACCGGTTTTCATGCTTTTCTTaGGTGAAGGCGTGGAAATCA +
Preference number: 3 (lower is better)
Translates to: ELLSRLTSIWRDGKLSNRFSCFS*VKAWKS
Trigger: TGATTTCCACGCCTTCACCAAAGAAAAGCATGAAAA...CCGGTTAGATAACTTACCATCTCTCCAGATTGAAGTTAGTCGGGAAAGCAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR TCA 72 bp CAGTTACTTAAGAGGTTCAAGCTACTTGGGAAAGCTTaGGCCCAGGAGTTTGAGTCCAATCTAGACAACATA +
Preference number: 3 (lower is better)
Translates to: QLLKRFKLLGKA*AQEFESNLDNI
Trigger: TATGTTGTCTAGATTGGACTCAAACTCCTGGGCTCAAGCTTTCCCAAGTAGCTTGAACCTCTTAAGTAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 72 bp TTCATTTACCAAACACTTTCGAAGCACTACTTACTCTaGGCTGGCCTGATGAAAGGATACAGAGATAACACC +
Preference number: 3 (lower is better)
Translates to: FIYQTLSKHYLL*AGLMKGYRDNT
Trigger: GGTGTTATCTCTGTATCCTTTCATCAGGCCAGCCCAGAGTAAGTAGTGCTTCGAAAGTGTTTGGTAAATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 72 bp CCGGGACCAACTTCAAGGACGTTCTACAACAGAAACTaGACTGTACTCTTCACAAACATCAATGTCATGAAA +
Preference number: 3 (lower is better)
Translates to: PGPTSRTFYNRN*TVLFTNINVMK
Trigger: TTTCATGACATTGATGTTTGTGAAGAGTACAGTCCAGTTTCTGTTGTAGAACGTCCTTGAAGTTGGTCCCGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR-3UTR CAA 90 bp GCCCATGTTCCAGCAAACCGAAGAAAAACACTGTTTCTTAAAACTGCAGAGGAATCTTTTCTGCCAATTTaGAAGATGTCTTCAGGTGCC +
Preference number: 3 (lower is better)
Translates to: AHVPANRRKTLFLKTAEESFLPI*KMSSGA
Trigger: GGCACCTGAAGACATCTTCAAAATTGGCAGAAAAGA...TTCCTCTGCAGTTTTAAGAAACAGTGTTTTTCTTCGGTTTGCTGGAACATGGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR TCA 72 bp ACTCGGATGCCTCACAACTACTTAAAATTGGCTTTTTaGAGCAGCATTTCCCTAACTACTCCCAGGAACAAA +
Preference number: 3 (lower is better)
Translates to: TRMPHNYLKLAF*SSISLTTPRNK
Trigger: TTTGTTCCTGGGAGTAGTTAGGGAAATGCTGCTTCAAAAAGCCAATTTTAAGTAGTTGTGAGGCATCCGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 72 bp AGTGTGGAATTTATTCTCGGGGCAATAGTGAAGCTTTaGAAAACGTTCAAGCAGAGGAATAACAGAATCAGA +
Preference number: 3 (lower is better)
Translates to: SVEFILGAIVKL*KTFKQRNNRIR
Trigger: TCTGATTCTGTTATTCCTCTGCTTGAACGTTTTCCAAAGCTTCACTATTGCCCCGAGAATAAATTCCACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR TCA 72 bp AAAGTGCTTATGACTACTAGATCTTGCTCGGTTATGTaGGATTACAATTCACCGGTTTCCATCCTGTATGAA +
Preference number: 3 (lower is better)
Translates to: KVLMTTRSCSVM*DYNSPVSILYE
Trigger: TTCATACAGGATGGAAACCGGTGAATTGTAATCTCACATAACCGAGCAAGATCTAGTAGTCATAAGCACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR GCA 72 bp AAGAAAAGTTGTAGATATTTATTGTGGGTCTGGTTATaGAAGAACAATCTTCCTGGACACAGTGTGCGATTC +
Preference number: 3 (lower is better)
Translates to: KKSCRYLLWVWL*KNNLPGHSVRF
Trigger: GAATCGCACACTGTGTCCAGGAAGATTGTTCTTGCATAACCAGACCCACAATAAATATCTACAACTTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CCA 72 bp CCATTCGCTTTGAGATGTGAATGTGTTAACCCAGGGTaGACAATGGTGTTGACTTCATTACTAGATAAAAAT +
Preference number: 3 (lower is better)
Translates to: PFALRCECVNPG*TMVLTSLLDKN
Trigger: ATTTTTATCTAGTAATGAAGTCAACACCATTGTCCACCCTGGGTTAACACATTCACATCTCAAAGCGAATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR TCA 72 bp ATTTCTCAGGTGGTAATTTGTTACCAATTCGGTTTTTaGTATTGCTTGAAGATACACTATCTGCCCTCATGG +
Preference number: 3 (lower is better)
Translates to: ISQVVICYQFGF*YCLKIHYLPSW
Trigger: CCATGAGGGCAGATAGTGTATCTTCAAGCAATATCAAAAACCGAATTGGTAACAAATTACCACCTGAGAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR CCA 72 bp ACATGTAAGAAAAGTTGTAGATATTTATTGTGGGTCTaGTTATGCAAGAACAATCTTCCTGGACACAGTGTG +
Preference number: 3 (lower is better)
Translates to: TCKKSCRYLLWV*LCKNNLPGHSV
Trigger: CACACTGTGTCCAGGAAGATTGTTCTTGCATAACCAGACCCACAATAAATATCTACAACTTTTCTTACATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR GCA 72 bp TGCAGCCCTTTACTTCCTTTATTAATAACAGTGTTCTaGATTAATTCGTGCCACAGTGTAATCAACTATCAA +
Preference number: 3 (lower is better)
Translates to: CSPLLPLLITVF*INSCHSVINYQ
Trigger: TTGATAGTTGATTACACTGTGGCACGAATTAATGCAGAACACTGTTATTAATAAAGGAAGTAAAGGGCTGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR TCA 90 bp CTAGGGTCCCGGAAGGGTGAGCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGAGTGCTCGGCGTGAGGTaGAAGGGCTGCCTGTGGGTC +
Preference number: 4 (lower is better)
Translates to: LGSRKGELAASLLFPLEGVLGVR*KGCLWV
Trigger: GACCCACAGGCAGCCCTTTCACCTCACGCCGAGCAC...TCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGCTCACCCTTCCGGGACCCTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp GGGGGAGGTTCCTACTGCGCGCCCCACCCTGTGCAAGAATGTCAGGCTTTAGGGCTCCGCTCCCGGGGCTaGTTGAGAGCCGGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: GGGSYCAPHPVQECQALGLRSRG*LRAGSS
Trigger: GGAGCTCCCGGCTCTCAAGCAGCCCCGGGAGCGGAG...CCCTAAAGCCTGACATTCTTGCACAGGGTGGGGCGCGCAGTAGGAACCTCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR CAA 72 bp CTGGATCGTCTAGACGCGCTCCGCTCCCGGGGCTGCTaGAGAGCCGGGAGCTCCTCGTGGTACTCTACCACC +
Preference number: 4 (lower is better)
Translates to: LDRLDALRSRGC*RAGSSSWYSTT
Trigger: GGTGGTAGAGTACCACGAGGAGCTCCCGGCTCTCAAGCAGCCCCGGGAGCGGAGCGCGTCTAGACGATCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574911.5
CDS-3UTR TCA 90 bp GAGAGCAGCCCAGTCACTGAGCAGATCCCTGCTAGGGCAGGGCTAGAACCCAGAGCTCCCGGGGCTGCTTaGGAGCCGGGAGCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: ESSPVTEQIPARAGLEPRAPGAA*EPGAPR
Trigger: ACGAGGAGCTCCCGGCTCTCAAGCAGCCCCGGGAGC...TCTGGGTTCTAGCCCTGCCCTAGCAGGGATCTGCTCAGTGACTGGGCTGCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp GGATCGTCTAGACGCGCTCCGCTCCCGGGGCTGCTTGAGAGCCGGGAGCTCCTCGCACTGGTGCACCTCTaGGGTCAGGTCCGTGAGATT +
Preference number: 4 (lower is better)
Translates to: GSSRRAPLPGLLESRELLALVHL*GQVREI
Trigger: AATCTCACGGACCTGACCTCAGAGGTGCACCAGTGC...GAGGAGCTCCCGGCTCTCAAGCAGCCCCGGGAGCGGAGCGCGTCTAGACGATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574911.5
CDS-3UTR CCA 90 bp GCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGACCTCCTCCACCTCCATaGGCTCCGGCTCGCCACGGT +
Preference number: 4 (lower is better)
Translates to: AGRFPPLPPRRMSNKHLGPPPPP*APARHG
Trigger: ACCGTGGCGAGCCGGAGCCCATGGAGGTGGAGGAGG...TCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp GCTGCAGCTCTTATCTACCTGGGCGGCACTGGTGCACCTCTGAGGTCAGGTCCGCCCGGAAGGGTGAGCTaGCCGCTTCCCTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: AAALIYLGGTGAPLRSGPPGRVS*PLPSSS
Trigger: GGAAGAGGAGGGAAGCGGCCAGCTCACCCTTCCGGG...CGGACCTGACCTCAGAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR GCA 90 bp GCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGATCACGCCCAGCTGCCTaGCACGGGCCTGTCCTGACT +
Preference number: 4 (lower is better)
Translates to: AGRFPPLPPRRMSNKHLGSRPAA*HGPVLT
Trigger: AGTCAGGACAGGCCCGTGGCAGGCAGCTGGGCGTGA...TCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp GGGGGAGGTTCCTACTGCGCGCCCCACCCTGTGCAAGAATGTCAGGCTTTAGGGCTGAGGTCAGGTCCGTaGGATTCGCCCCACACTAGG +
Preference number: 4 (lower is better)
Translates to: GGGSYCAPHPVQECQALGLRSGP*DSPHTR
Trigger: CCTAGTGTGGGGCGAATCTCACGGACCTGACCTCAG...CCCTAAAGCCTGACATTCTTGCACAGGGTGGGGCGCGCAGTAGGAACCTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR TCA 90 bp CTAGGGTCCCGGAAGGGTGAGCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGACCAGAATGGCTTCGCTaGTCTGTAGCAGGAGACTGC +
Preference number: 4 (lower is better)
Translates to: LGSRKGELAASLLFPLEGPEWLR*SVAGDC
Trigger: GCAGTCTCCTGCTACAGATCAGCGAAGCCATTCTGG...TCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGCTCACCCTTCCGGGACCCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp CTAGGGTCCCGGAAGGGTGAGCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGAGTTGAGCCCTCCATTTaGCAGACAGGGAAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LGSRKGELAASLLFPLEGVEPSI*QTGKLR
Trigger: CCTCAGCTTCCCTGTCTGTCAAATGGAGGGCTCAAC...TCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGCTCACCCTTCCGGGACCCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp GGGGGAGGTTCCTACTGCGCGCCCCACCCTGTGCAAGAATGTCAGGCTTTAGGGCTGGTCTCGAACTCCTaGCATCAGGTGATCCCCGCC +
Preference number: 4 (lower is better)
Translates to: GGGSYCAPHPVQECQALGLVSNS*HQVIPA
Trigger: GGCGGGGATCACCTGATGTCAGGAGTTCGAGACCAG...CCCTAAAGCCTGACATTCTTGCACAGGGTGGGGCGCGCAGTAGGAACCTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp TGCTGCACCTGCGGCCTGCCTCAGTTCCCAAGCTCCCCAAAAGTGATCTTCTCGGGCAGGAGAATGGCGTaGACCCAGGAGGCGGAGCTC +
Preference number: 4 (lower is better)
Translates to: CCTCGLPQFPSSPKVIFSGRRMA*TQEAEL
Trigger: GAGCTCCGCCTCCTGGGTTCACGCCATTCTCCTGCC...CGAGAAGATCACTTTTGGGGAGCTTGGGAACTGAGGCAGGCCGCAGGTGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp CTAGGGTCCCGGAAGGGTGAGCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGAAGGGCCAGGCTCTGTTaGGTAATGCTCCCCATCACA +
Preference number: 4 (lower is better)
Translates to: LGSRKGELAASLLFPLEGRARLC*VMLPIT
Trigger: TGTGATGGGGAGCATTACTCAACAGAGCCTGGCCCT...TCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGCTCACCCTTCCGGGACCCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp GGGGGAGGTTCCTACTGCGCGCCCCACCCTGTGCAAGAATGTCAGGCTTTAGGGTGCACTCCACTTGGGTaGCAGAGCGAGACTCCGTCT +
Preference number: 4 (lower is better)
Translates to: GGGSYCAPHPVQECQALGCTPLG*QSETPS
Trigger: AGACGGAGTCTCGCTCTGTCACCCAAGTGGAGTGCA...CCCTAAAGCCTGACATTCTTGCACAGGGTGGGGCGCGCAGTAGGAACCTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp GCTGCAGCTCTTATCTACCTGGGCGGCACTGGTGCACCTCTGAGGTCAGGTCCGCGACAGGATCCAGGCTaGACTGTGTGCACAACAGCC +
Preference number: 4 (lower is better)
Translates to: AAALIYLGGTGAPLRSGPRQDPG*TVCTTA
Trigger: GGCTGTTGTGCACACAGTGCAGCCTGGATCCTGTCG...CGGACCTGACCTCAGAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR GCA 90 bp GGTGAGCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGCTGGCGAGCCCACTaGCGTCACAGCTTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: GELAASLLFPLEGCPISTCWRAH*RHSLGR
Trigger: TCTTCCCAAGCTGTGACGGCAGTGGGCTCGCCAGCA...GGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGCTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp CTAGGGTCCCGGAAGGGTGAGCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGAGCATATTCTAAACCCTaGAGAGGCATGCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LGSRKGELAASLLFPLEGAYSKP*RGMPAG
Trigger: CCCAGCTGGCATGCCTCTGCAGGGTTTAGAATATGC...TCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGCTCACCCTTCCGGGACCCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp GCTGCAGCTCTTATCTACCTGGGCGGCACTGGTGCACCTCTGAGGTCAGGTCCGAAGTGTGCAGCCCTGTaGCCACATGTGTGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: AAALIYLGGTGAPLRSGPKCAAL*PHVWGV
Trigger: CACTCCCCACACATGTGGGCACAGGGCTGCACACTT...CGGACCTGACCTCAGAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp TGCTGCACCTGCGGCCTGCCTCAGTTCCCAAGCTCCCCAAAAGTGATCTTCTCGCCGAGACTGCGCCATTaGACTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: CCTCGLPQFPSSPKVIFSPRLRH*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAATGGCGCAGTCTCGG...CGAGAAGATCACTTTTGGGGAGCTTGGGAACTGAGGCAGGCCGCAGGTGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp GGATCGTCTAGACGCGCTCCGCTCCCGGGGCTGCTTGAGAGCCGGGAGCTCCTCCTTCCTCCTCTTCAATaGGTTCCTCGGGAACATTCA +
Preference number: 4 (lower is better)
Translates to: GSSRRAPLPGLLESRELLLPPLQ*VPREHS
Trigger: TGAATGTTCCCGAGGAACCCATTGAAGAGGAGGAAG...GAGGAGCTCCCGGCTCTCAAGCAGCCCCGGGAGCGGAGCGCGTCTAGACGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574911.5
CDS-3UTR CCA 90 bp GCTGCAGCTCTTATCTACCTGGGCGGCACTGGTGCACCTCTGAGGTCAGGTCCGAGCAGAGCCAGGGGTTaGCATCCAGGTGTCCGATTC +
Preference number: 4 (lower is better)
Translates to: AAALIYLGGTGAPLRSGPSRARG*HPGVRF
Trigger: GAATCGGACACCTGGATGCCAACCCCTGGCTCTGCT...CGGACCTGACCTCAGAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp GCTGCAGCTCTTATCTACCTGGGCGGCACTGGTGCACCTCTGAGGTCAGGTCCGCCTATACCCTGGCTCTaGAAGTTGGGGACTGCCTCC +
Preference number: 4 (lower is better)
Translates to: AAALIYLGGTGAPLRSGPPIPWL*KLGTAS
Trigger: GGAGGCAGTCCCCAACTTCCAGAGCCAGGGTATAGG...CGGACCTGACCTCAGAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp TCTTCTCCCGAGTATCGGCGTAGAGGCCTTTACTATCCTGCCTGGGAACACCTAAGGGTCCCGGAAGGGTaGGCTGGCCGCTTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: SSPEYRRRGLYYPAWEHLRVPEG*AGRFPP
Trigger: AGGAGGGAAGCGGCCAGCTCACCCTTCCGGGACCCT...TAGGTGTTCCCAGGCAGGATAGTAAAGGCCTCTACGCCGATACTCGGGAGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574911.5
CDS-3UTR TCA 90 bp CTAGGGTCCCGGAAGGGTGAGCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGAATCTTCACATCAAGCTaGCAGCACGTAAGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: LGSRKGELAASLLFPLEGIFTSS*QHVRGP
Trigger: TGGGCCTCTTACGTGCTGTCAGCTTGATGTGAAGAT...TCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGCTCACCCTTCCGGGACCCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR TCA 90 bp GCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAGTAGCAGGAGACTGCTaGGTGCTGAAAGGCCGTGGA +
Preference number: 4 (lower is better)
Translates to: AGRFPPLPPRRMSNKHLGVAGDC*VLKGRG
Trigger: TCCACGGCCTTTCAGCACTCAGCAGTCTCCTGCTAC...TCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp GCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGACTAACCTGCAGACAGTaGTGCCAGAACTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: AGRFPPLPPRRMSNKHLGLTCRQ*CQNWAG
Trigger: CCCAGCCCAGTTCTGGCATCACTGTCTGCAGGTTAG...TCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp GCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGACTGGAAGTTGGGGACTaGCTCCTAGAAGGGCCCCTA +
Preference number: 4 (lower is better)
Translates to: AGRFPPLPPRRMSNKHLGLEVGD*LLEGPL
Trigger: TAGGGGCCCTTCTAGGAGGCAGTCCCCAACTTCCAG...TCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp GCTGCAGCTCTTATCTACCTGGGCGGCACTGGTGCACCTCTGAGGTCAGGTCCGTTTAGTACTGCTGACTaGTGGCCGTGGACGGGAGTG +
Preference number: 4 (lower is better)
Translates to: AAALIYLGGTGAPLRSGPFSTAD*WPWTGV
Trigger: CACTCCCGTCCACGGCCACCAGTCAGCAGTACTAAA...CGGACCTGACCTCAGAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR CCA 90 bp TGCTGCACCTGCGGCCTGCCTCAGTTCCCAAGCTCCCCAAAAGTGATCTTCTCGAAGCCTGTGGGGTGGTaGGAAAGGAATCGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: CCTCGLPQFPSSPKVIFSKPVGW*ERNRGP
Trigger: GGGCCCTCGATTCCTTTCCCACCACCCCACAGGCTT...CGAGAAGATCACTTTTGGGGAGCTTGGGAACTGAGGCAGGCCGCAGGTGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp CTAGGGTCCCGGAAGGGTGAGCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGAGTAATCCCAGAACTTTaGGAGGAAGAGGTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LGSRKGELAASLLFPLEGVIPEL*EEEVGR
Trigger: TCTGCCCACCTCTTCCTCCCAAAGTTCTGGGATTAC...TCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGCTCACCCTTCCGGGACCCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp GGGGGAGGTTCCTACTGCGCGCCCCACCCTGTGCAAGAATGTCAGGCTTTAGGGAAAATTAGCCAGGCGTaGCAGCGTGTGCCTGTAGCC +
Preference number: 4 (lower is better)
Translates to: GGGSYCAPHPVQECQALGKISQA*QRVPVA
Trigger: GGCTACAGGCACACGCTGCCACGCCTGGCTAATTTT...CCCTAAAGCCTGACATTCTTGCACAGGGTGGGGCGCGCAGTAGGAACCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp GGGGGAGGTTCCTACTGCGCGCCCCACCCTGTGCAAGAATGTCAGGCTTTAGGGTCCTCTCCCCCGCATTaGCCTAAAGCAGGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: GGGSYCAPHPVQECQALGSSPPH*PKAGRE
Trigger: CTCTCTTCCTGCTTTAGGCCAATGCGGGGGAGAGGA...CCCTAAAGCCTGACATTCTTGCACAGGGTGGGGCGCGCAGTAGGAACCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp AGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACACCGGGATCAGTTCCTTaGGCGAGCGCCGCACAGGCA +
Preference number: 4 (lower is better)
Translates to: SSATSKDRQDPGCTVCTTPGSVP*ASAAQA
Trigger: TGCCTGTGCGGCGCTCGCTCAAGGAACTGATCCCGG...TGTTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp TGCTGCACCTGCGGCCTGCCTCAGTTCCCAAGCTCCCCAAAAGTGATCTTCTCGTCAGGACTCTGCCTCTaGACCAGAGCTGCTTTCCCG +
Preference number: 4 (lower is better)
Translates to: CCTCGLPQFPSSPKVIFSSGLCL*TRAAFP
Trigger: CGGGAAAGCAGCTCTGGTTCAGAGGCAGAGTCCTGA...CGAGAAGATCACTTTTGGGGAGCTTGGGAACTGAGGCAGGCCGCAGGTGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp CCCGAGTATCGGCGTAGAGGCCTTTACTATCCTGCCTGGGAACACCTAGCCTACCTGAGGTCAGGTCCGTaGGATTCGCCCCACACTAGG +
Preference number: 4 (lower is better)
Translates to: PEYRRRGLYYPAWEHLAYLRSGP*DSPHTR
Trigger: CCTAGTGTGGGGCGAATCTCACGGACCTGACCTCAG...GTAGGCTAGGTGTTCCCAGGCAGGATAGTAAAGGCCTCTACGCCGATACTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574911.5
CDS-3UTR TCA 90 bp GCTGCAGCTCTTATCTACCTGGGCGGCACTGGTGCACCTCTGAGGTCAGGTCCGGCCACGGGCCTGTCCTaGCTATCCATTCTTACTCTT +
Preference number: 4 (lower is better)
Translates to: AAALIYLGGTGAPLRSGPATGLS*LSILTL
Trigger: AAGAGTAAGAATGGATAGTCAGGACAGGCCCGTGGC...CGGACCTGACCTCAGAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp GGTGAGCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCCCATCCTACTTCTGTTaGACCTCGTCCCAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GELAASLLFPLEGCPISTPSYFC*TSSQAG
Trigger: TCCTGCCTGGGACGAGGTTCAACAGAAGTAGGATGG...GGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGCTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp AGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACACCTGGGCGGCACTGGTaGACCTCTGAGGTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SSATSKDRQDPGCTVCTTPGRHW*TSEVRS
Trigger: GGACCTGACCTCAGAGGTGCACCAGTGCCGCCCAGG...TGTTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR GCA 90 bp GGGGGAGGTTCCTACTGCGCGCCCCACCCTGTGCAAGAATGTCAGGCTTTAGGGTGCAGTAGAAATTCATaGTGGCGAGCCCACTGCCGT +
Preference number: 4 (lower is better)
Translates to: GGGSYCAPHPVQECQALGCSRNS*WRAHCR
Trigger: ACGGCAGTGGGCTCGCCAGCATGAATTTCTACTGCA...CCCTAAAGCCTGACATTCTTGCACAGGGTGGGGCGCGCAGTAGGAACCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp GGGGGAGGTTCCTACTGCGCGCCCCACCCTGTGCAAGAATGTCAGGCTTTAGGGGGAACACACAAAGTGTaGAGCCCTGTGCCCACATGT +
Preference number: 4 (lower is better)
Translates to: GGGSYCAPHPVQECQALGGTHKV*SPVPTC
Trigger: ACATGTGGGCACAGGGCTGCACACTTTGTGTGTTCC...CCCTAAAGCCTGACATTCTTGCACAGGGTGGGGCGCGCAGTAGGAACCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp GCTGCAGCTCTTATCTACCTGGGCGGCACTGGTGCACCTCTGAGGTCAGGTCCGCCCCTACTTCTTTCCTaGTATCTAGCCCACACCCCT +
Preference number: 4 (lower is better)
Translates to: AAALIYLGGTGAPLRSGPPLLLS*YLAHTP
Trigger: AGGGGTGTGGGCTAGATAGCAGGAAAGAAGTAGGGG...CGGACCTGACCTCAGAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp GGGGGAGGTTCCTACTGCGCGCCCCACCCTGTGCAAGAATGTCAGGCTTTAGGGAGTAGAAATTCATGCTaGCGAGCCCACTGCCGTCAC +
Preference number: 4 (lower is better)
Translates to: GGGSYCAPHPVQECQALGSRNSC*RAHCRH
Trigger: GTGACGGCAGTGGGCTCGCCAGCATGAATTTCTACT...CCCTAAAGCCTGACATTCTTGCACAGGGTGGGGCGCGCAGTAGGAACCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp GCTGCAGCTCTTATCTACCTGGGCGGCACTGGTGCACCTCTGAGGTCAGGTCCGCTGTGCCCACATGTGTaGGGAGTGTCCAGGGTAAAA +
Preference number: 4 (lower is better)
Translates to: AAALIYLGGTGAPLRSGPLCPHV*GVSRVK
Trigger: TTTTACCCTGGACACTCCCCACACATGTGGGCACAG...CGGACCTGACCTCAGAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp GCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGACTGCAGTGTGCAGAATaGAGACAGGGCAGAGACCAG +
Preference number: 4 (lower is better)
Translates to: AGRFPPLPPRRMSNKHLGLQCAE*RQGRDQ
Trigger: CTGGTCTCTGCCCTGTCTCCATTCTGCACACTGCAG...TCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp GGATCGTCTAGACGCGCTCCGCTCCCGGGGCTGCTTGAGAGCCGGGAGCTCCTCCATGCTTTTCTTTGGTaGAGGCGTGGAAATCATTTT +
Preference number: 4 (lower is better)
Translates to: GSSRRAPLPGLLESRELLHAFLW*RRGNHF
Trigger: AAAATGATTTCCACGCCTTCACCAAAGAAAAGCATG...GAGGAGCTCCCGGCTCTCAAGCAGCCCCGGGAGCGGAGCGCGTCTAGACGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574911.5
CDS-3UTR TCA 90 bp GCTGCAGCTCTTATCTACCTGGGCGGCACTGGTGCACCTCTGAGGTCAGGTCCGATCTTCACATCAAGCTaGCAGCACGTAAGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: AAALIYLGGTGAPLRSGPIFTSS*QHVRGP
Trigger: TGGGCCTCTTACGTGCTGTCAGCTTGATGTGAAGAT...CGGACCTGACCTCAGAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR TCA 90 bp GAGAGCAGCCCAGTCACTGAGCAGATCCCTGCTAGGGCAGGGCTAGAACCCAGAGCAGGTGAAGAGTCGTaGCATCGCAAAAAGGACCAC +
Preference number: 4 (lower is better)
Translates to: ESSPVTEQIPARAGLEPRAGEES*HRKKDH
Trigger: GTGGTCCTTTTTGCGATGTCACGACTCTTCACCTGC...TCTGGGTTCTAGCCCTGCCCTAGCAGGGATCTGCTCAGTGACTGGGCTGCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp CTAGGGTCCCGGAAGGGTGAGCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATCTGTGAAGATCCGATaGCATTTCCAACACTTTGCC +
Preference number: 4 (lower is better)
Translates to: LGSRKGELAASLLFPLEGSVKIR*HFQHFA
Trigger: GGCAAAGTGTTGGAAATGTCATCGGATCTTCACAGA...TCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGCTCACCCTTCCGGGACCCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp GAGAGCAGCCCAGTCACTGAGCAGATCCCTGCTAGGGCAGGGCTAGAACCCAGATCCAGTGTAGAGGTGTaGAGGGTTGTGGGGTACAGT +
Preference number: 4 (lower is better)
Translates to: ESSPVTEQIPARAGLEPRSSVEV*RVVGYS
Trigger: ACTGTACCCCACAACCCTGCACACCTCTACACTGGA...TCTGGGTTCTAGCCCTGCCCTAGCAGGGATCTGCTCAGTGACTGGGCTGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp TTAGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAAGGCAGGATCGGGGCCTaGGGCCTACAGCCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: LAPPQVKIDRIQAALCAQGRIGA*GLQPVF
Trigger: GAAGACAGGCTGTAGGCCGCAGGCCCCGATCCTGCC...TTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp GAGAGCAGCCCAGTCACTGAGCAGATCCCTGCTAGGGCAGGGCTAGAACCCAGAACTTCCGATCGAAAATaGAAGCGCTTGGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: ESSPVTEQIPARAGLEPRTSDRK*KRLARC
Trigger: GCAGCGAGCCAAGCGCTTCCATTTTCGATCGGAAGT...TCTGGGTTCTAGCCCTGCCCTAGCAGGGATCTGCTCAGTGACTGGGCTGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp GCTGCAGCTCTTATCTACCTGGGCGGCACTGGTGCACCTCTGAGGTCAGGTCCGCCCTTCCTAAGAACCTaGCTCTCAGCTGTATGCTTC +
Preference number: 4 (lower is better)
Translates to: AAALIYLGGTGAPLRSGPPFLRT*LSAVCF
Trigger: GAAGCATACAGCTGAGAGCCAGGTTCTTAGGAAGGG...CGGACCTGACCTCAGAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp GCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAAAGCAGAGACTGTGCTaGGATGGGAATAAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: AGRFPPLPPRRMSNKHLGKQRLC*DGNKPL
Trigger: CAGGGGCTTATTCCCATCCCAGCACAGTCTCTGCTT...TCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp GGGGGAGGTTCCTACTGCGCGCCCCACCCTGTGCAAGAATGTCAGGCTTTAGGGAACAAATCAGTTGTTTaGGCCATTCCGCTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: GGGSYCAPHPVQECQALGNKSVV*AIPLAP
Trigger: AGGGGCCAGCGGAATGGCCCAAACAACTGATTTGTT...CCCTAAAGCCTGACATTCTTGCACAGGGTGGGGCGCGCAGTAGGAACCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp ATGAGACACACAGGGGTCCGTAAAGCCCACCTGGCGGTAGCTGCTTTCCCCACATCAGGGCTCTCTTCTTaGTCACGTCCCGCTGAATAC +
Preference number: 4 (lower is better)
Translates to: MRHTGVRKAHLAVAAFPTSGLSS*SRPAEY
Trigger: GTATTCAGCGGGACGTGATCAAGAAGAGAGCCCTGA...TGTGGGGAAAGCAGCTACCGCCAGGTGGGCTTTACGGACCCCTGTGTGTCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp GCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGACGTGGACGGGAGTGCTaGCGTTTCTCATCTAATAGA +
Preference number: 4 (lower is better)
Translates to: AGRFPPLPPRRMSNKHLGRGREC*RFSSNR
Trigger: TCTATTAGATGAGAAACGTCAGCACTCCCGTCCACG...TCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR TCA 90 bp GCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGACCGCTGGCGTATATCTaGTTTAGTACTGCTGACTGG +
Preference number: 4 (lower is better)
Translates to: AGRFPPLPPRRMSNKHLGPLAYI*FSTADW
Trigger: CCAGTCAGCAGTACTAAATCAGATATACGCCAGCGG...TCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR TCA 90 bp CTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAATTGACTTTTCTTAGGGTCCCGGAAGGGTaGGCTGGCCGCTTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LLFPLEGCPISTWELTFLRVPEG*AGRFPP
Trigger: AGGAGGGAAGCGGCCAGCTCACCCTTCCGGGACCCT...AAGAAAAGTCAATTCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR TCA 90 bp ATGAGACACACAGGGGTCCGTAAAGCCCACCTGGCGGTAGCTGCTTTCCCCACAGAGACTGCTGAGTGCTaGAAGGCCGTGGAACAAATG +
Preference number: 4 (lower is better)
Translates to: MRHTGVRKAHLAVAAFPTETAEC*KAVEQM
Trigger: CATTTGTTCCACGGCCTTTCAGCACTCAGCAGTCTC...TGTGGGGAAAGCAGCTACCGCCAGGTGGGCTTTACGGACCCCTGTGTGTCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp TTTTCTCAAAGGGTAAAGCCTGTGGGGTGGTGGGAAAGGAATCGAGGGCCCAGAGGCAGGAGAATCGCTTaGACCCCGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: FSQRVKPVGWWERNRGPRGRRIA*TPEVEV
Trigger: AACCTCCACCTCCGGGGTTCAAGCGATTCTCCTGCC...TCTGGGCCCTCGATTCCTTTCCCACCACCCCACAGGCTTTACCCTTTGAGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp GGTGAGCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCAATCCTGGAGAGAGCTaGGACTCTTCTGTGGCAGTA +
Preference number: 4 (lower is better)
Translates to: GELAASLLFPLEGCPISTNPGES*DSSVAV
Trigger: TACTGCCACAGAAGAGTCTCAGCTCTCTCCAGGATT...GGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGCTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp TTTTCTCAAAGGGTAAAGCCTGTGGGGTGGTGGGAAAGGAATCGAGGGCCCAGAGCCTCTCACAGGCCCTaGGGAGAAGATGGCCACATC +
Preference number: 4 (lower is better)
Translates to: FSQRVKPVGWWERNRGPRASHRP*GEDGHI
Trigger: GATGTGGCCATCTTCTCCTCAGGGCCTGTGAGAGGC...TCTGGGCCCTCGATTCCTTTCCCACCACCCCACAGGCTTTACCCTTTGAGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp TTTTCTCAAAGGGTAAAGCCTGTGGGGTGGTGGGAAAGGAATCGAGGGCCCAGATCTAGCCCACACCCCTaGTGCTCCCCGGAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: FSQRVKPVGWWERNRGPRSSPHP*CSPERR
Trigger: TCTCCTTTCCGGGGAGCATCAGGGGTGTGGGCTAGA...TCTGGGCCCTCGATTCCTTTCCCACCACCCCACAGGCTTTACCCTTTGAGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp GAGAGCAGCCCAGTCACTGAGCAGATCCCTGCTAGGGCAGGGCTAGAACCCAGACCAGGTGCTGTGGACTaGACTGTAAATGTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: ESSPVTEQIPARAGLEPRPGAVD*TVNVLQ
Trigger: TTGGAGGACATTTACAGTTCAGTCCACAGCACCTGG...TCTGGGTTCTAGCCCTGCCCTAGCAGGGATCTGCTCAGTGACTGGGCTGCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp GGTGAGCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGAGGAATGAGCTCTaGTCTTTTCACCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GELAASLLFPLEGCPISTWRNEL*SFHLLW
Trigger: CCAGAGCAGGTGAAAAGAGCAGAGCTCATTCCTCCA...GGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGCTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp GCTGCAGCTCTTATCTACCTGGGCGGCACTGGTGCACCTCTGAGGTCAGGTCCGCTTACAAGAGCCATGTaGAGGCACCAAGAAAAGCCT +
Preference number: 4 (lower is better)
Translates to: AAALIYLGGTGAPLRSGPLTRAM*RHQEKP
Trigger: AGGCTTTTCTTGGTGCCTGCACATGGCTCTTGTAAG...CGGACCTGACCTCAGAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp GGGGGAGGTTCCTACTGCGCGCCCCACCCTGTGCAAGAATGTCAGGCTTTAGGGCCACTTCTGTACCTCTaGACACTTCTAGAATGCGGA +
Preference number: 4 (lower is better)
Translates to: GGGSYCAPHPVQECQALGPLLYL*TLLECG
Trigger: TCCGCATTCTAGAAGTGTGCAGAGGTACAGAAGTGG...CCCTAAAGCCTGACATTCTTGCACAGGGTGGGGCGCGCAGTAGGAACCTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp CTAGGGTCCCGGAAGGGTGAGCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGAGTCTTAAGTCTCAACTaGCAGAGAAACCAGAACCAT +
Preference number: 4 (lower is better)
Translates to: LGSRKGELAASLLFPLEGVLSLN*QRNQNH
Trigger: ATGGTTCTGGTTTCTCTGCCAGTTGAGACTTAAGAC...TCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGCTCACCCTTCCGGGACCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp GAGAGCAGCCCAGTCACTGAGCAGATCCCTGCTAGGGCAGGGCTAGAACCCAGAAAGGAAGATCAGTGGTaGCCAGAGGCTAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: ESSPVTEQIPARAGLEPRKEDQW*PEAKRE
Trigger: TTCCCTCTTAGCCTCTGGCCACCACTGATCTTCCTT...TCTGGGTTCTAGCCCTGCCCTAGCAGGGATCTGCTCAGTGACTGGGCTGCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp GCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAGCTGAGACTCTTCTGTaGCAGTACCATGGGACACAT +
Preference number: 4 (lower is better)
Translates to: AGRFPPLPPRRMSNKHLGAETLL*QYHGTH
Trigger: ATGTGTCCCATGGTACTGCCACAGAAGAGTCTCAGC...TCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp CTAGGGTCCCGGAAGGGTGAGCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGACAAGAAATGACTACATaGGACCTCAAGATGTTGGTC +
Preference number: 4 (lower is better)
Translates to: LGSRKGELAASLLFPLEGQEMTT*DLKMLV
Trigger: GACCAACATCTTGAGGTCCCATGTAGTCATTTCTTG...TCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGCTCACCCTTCCGGGACCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp AGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACAAGATGCCAGGCATGCTaGCAGGCACAGGGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: SSATSKDRQDPGCTVCTTRCQAC*QAQGKA
Trigger: GGCTTTCCCCTGTGCCTGCCAGCATGCCTGGCATCT...TGTTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp GGGGGAGGTTCCTACTGCGCGCCCCACCCTGTGCAAGAATGTCAGGCTTTAGGGTCATCTGTGAAGCCATaGTTTGCTGTGGCTTCACAG +
Preference number: 4 (lower is better)
Translates to: GGGSYCAPHPVQECQALGSSVKP*FAVASQ
Trigger: CTGTGAAGCCACAGCAAACCATGGCTTCACAGATGA...CCCTAAAGCCTGACATTCTTGCACAGGGTGGGGCGCGCAGTAGGAACCTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp ATGAGACACACAGGGGTCCGTAAAGCCCACCTGGCGGTAGCTGCTTTCCCCACAAGGGCTGCAGAGCAGTaGTACTCACGACCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: MRHTGVRKAHLAVAAFPTRAAEQ*YSRPLN
Trigger: GTTCAAAGGTCGTGAGTACCACTGCTCTGCAGCCCT...TGTGGGGAAAGCAGCTACCGCCAGGTGGGCTTTACGGACCCCTGTGTGTCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp GAGAGCAGCCCAGTCACTGAGCAGATCCCTGCTAGGGCAGGGCTAGAACCCAGACAAAATGTTCATGGATaGAGGAGACGTGCTCGGCGT +
Preference number: 4 (lower is better)
Translates to: ESSPVTEQIPARAGLEPRQNVHG*RRRARR
Trigger: ACGCCGAGCACGTCTCCTCCATCCATGAACATTTTG...TCTGGGTTCTAGCCCTGCCCTAGCAGGGATCTGCTCAGTGACTGGGCTGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp TTTTCTCAAAGGGTAAAGCCTGTGGGGTGGTGGGAAAGGAATCGAGGGCCCAGAGCGCCAGGCGCCCTGTaGTCCACTTTCTTCGTATTC +
Preference number: 4 (lower is better)
Translates to: FSQRVKPVGWWERNRGPRAPGAL*STFFVF
Trigger: GAATACGAAGAAAGTGGATCACAGGGCGCCTGGCGC...TCTGGGCCCTCGATTCCTTTCCCACCACCCCACAGGCTTTACCCTTTGAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR TCA 90 bp AGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACATCAGGACTCTGCCTCTaGACCAGAGCTGCTTTCCCG +
Preference number: 4 (lower is better)
Translates to: SSATSKDRQDPGCTVCTTSGLCL*TRAAFP
Trigger: CGGGAAAGCAGCTCTGGTTCAGAGGCAGAGTCCTGA...TGTTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR TCA 90 bp TCAGTTCTAGATCATAGTCCATTTCATCTGAGTCTGAGCTGCTGGCACTGGATCCGGAGGGTGACTGTGTaGGCAGGAGCGAGAGGGCGC +
Preference number: 4 (lower is better)
Translates to: SVLDHSPFHLSLSCWHWIRRVTV*AGARGR
Trigger: GCGCCCTCTCGCTCCTGCTCACACAGTCACCCTCCG...GATCCAGTGCCAGCAGCTCAGACTCAGATGAAATGGACTATGATCTAGAACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574911.5
CDS-3UTR TCA 90 bp ATGAGACACACAGGGGTCCGTAAAGCCCACCTGGCGGTAGCTGCTTTCCCCACAAGATGTTGCAAGATCTaGGTGACTGAGAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: MRHTGVRKAHLAVAAFPTRCCKI*VTESGQ
Trigger: CTGCCCACTCTCAGTCACTCAGATCTTGCAACATCT...TGTGGGGAAAGCAGCTACCGCCAGGTGGGCTTTACGGACCCCTGTGTGTCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp GCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAAGCCACCATCCTATTTaGCTTTCCCCAACAGGCATT +
Preference number: 4 (lower is better)
Translates to: AGRFPPLPPRRMSNKHLGSHHPI*LSPTGI
Trigger: AATGCCTGTTGGGGAAAGTCAAATAGGATGGTGGCT...TCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp TGCTGCACCTGCGGCCTGCCTCAGTTCCCAAGCTCCCCAAAAGTGATCTTCTCGGAGAGCAAGGATCCTTaGACACGCGTTAGCACTAGA +
Preference number: 4 (lower is better)
Translates to: CCTCGLPQFPSSPKVIFSESKDP*TRVSTR
Trigger: TCTAGTGCTAACGCGTGTTCAAGGATCCTTGCTCTC...CGAGAAGATCACTTTTGGGGAGCTTGGGAACTGAGGCAGGCCGCAGGTGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp TTTTCTCAAAGGGTAAAGCCTGTGGGGTGGTGGGAAAGGAATCGAGGGCCCAGACACGTAAGAGGCCCATaGCATGAGCAATCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: FSQRVKPVGWWERNRGPRHVRGP*HEQSPR
Trigger: CCTCGGGGATTGCTCATGGCATGGGCCTCTTACGTG...TCTGGGCCCTCGATTCCTTTCCCACCACCCCACAGGCTTTACCCTTTGAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR GCA 90 bp GCTGCAGCTCTTATCTACCTGGGCGGCACTGGTGCACCTCTGAGGTCAGGTCCGGAATTACTGGGCTCATaGGATCAGGAGTGTGGAATT +
Preference number: 4 (lower is better)
Translates to: AAALIYLGGTGAPLRSGPELLGS*DQECGI
Trigger: AATTCCACACTCCTGATCGCATGAGCCCAGTAATTC...CGGACCTGACCTCAGAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp GAGAGCAGCCCAGTCACTGAGCAGATCCCTGCTAGGGCAGGGCTAGAACCCAGAGTAGAAACAGCTCTGTaGACAGTCTGTAGGGCTAGT +
Preference number: 4 (lower is better)
Translates to: ESSPVTEQIPARAGLEPRVETAL*TVCRAS
Trigger: ACTAGCCCTACAGACTGTGCACAGAGCTGTTTCTAC...TCTGGGTTCTAGCCCTGCCCTAGCAGGGATCTGCTCAGTGACTGGGCTGCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp ATGAGACACACAGGGGTCCGTAAAGCCCACCTGGCGGTAGCTGCTTTCCCCACAACAATCTCAGCTTACTaGAACCTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: MRHTGVRKAHLAVAAFPTTISAY*NLCLLG
Trigger: ACCCAGGAGGCAGAGGTTGCAGTAAGCTGAGATTGT...TGTGGGGAAAGCAGCTACCGCCAGGTGGGCTTTACGGACCCCTGTGTGTCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp AGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACAAGTGGGCGGAGATCATaGCACTGCACTCCACTTGGG +
Preference number: 4 (lower is better)
Translates to: SSATSKDRQDPGCTVCTTSGRRS*HCTPLG
Trigger: CCCAAGTGGAGTGCAGTGGCATGATCTCCGCCCACT...TGTTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp GAGAGCAGCCCAGTCACTGAGCAGATCCCTGCTAGGGCAGGGCTAGAACCCAGACTTCCTCCTCTTCAATaGGTTCCTCGGGAACATTCA +
Preference number: 4 (lower is better)
Translates to: ESSPVTEQIPARAGLEPRLPPLQ*VPREHS
Trigger: TGAATGTTCCCGAGGAACCCATTGAAGAGGAGGAAG...TCTGGGTTCTAGCCCTGCCCTAGCAGGGATCTGCTCAGTGACTGGGCTGCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp TTAGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAAGCTGACTGGTGGCCGTaGACGGGAGTGCTGACGTTT +
Preference number: 4 (lower is better)
Translates to: LAPPQVKIDRIQAALCAQADWWP*TGVLTF
Trigger: AAACGTCAGCACTCCCGTCCACGGCCACCAGTCAGC...TTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR CCA 90 bp CAGGACTCTGCCTCTGAACCAGAGCTGCTTTCCCGACTAACTTCAATCTGGAGAAGTACTGCTGACTGGTaGCCGTGGACGGGAGTGCTG +
Preference number: 4 (lower is better)
Translates to: QDSASEPELLSRLTSIWRSTADW*PWTGVL
Trigger: CAGCACTCCCGTCCACGGCCACCAGTCAGCAGTACT...TCTCCAGATTGAAGTTAGTCGGGAAAGCAGCTCTGGTTCAGAGGCAGAGTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574911.5
CDS-3UTR CCA 90 bp GGGGGAGGTTCCTACTGCGCGCCCCACCCTGTGCAAGAATGTCAGGCTTTAGGGCTTTACTATCCTGCCTaGGAACACCTAGCCTACTAT +
Preference number: 4 (lower is better)
Translates to: GGGSYCAPHPVQECQALGLYYPA*EHLAYY
Trigger: ATAGTAGGCTAGGTGTTCCCAGGCAGGATAGTAAAG...CCCTAAAGCCTGACATTCTTGCACAGGGTGGGGCGCGCAGTAGGAACCTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR CCA 90 bp ATGAGACACACAGGGGTCCGTAAAGCCCACCTGGCGGTAGCTGCTTTCCCCACAAACCGGCTCTTCTTTTaGCGAGACTGCTCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: MRHTGVRKAHLAVAAFPTNRLFF*RDCSFS
Trigger: GGAGAAAGAGCAGTCTCGCCAAAAGAAGAGCCGGTT...TGTGGGGAAAGCAGCTACCGCCAGGTGGGCTTTACGGACCCCTGTGTGTCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp TCTTCTCCCGAGTATCGGCGTAGAGGCCTTTACTATCCTGCCTGGGAACACCTACAGCTCTTATCTACCTaGGCGGCACTGGTGCACCTC +
Preference number: 4 (lower is better)
Translates to: SSPEYRRRGLYYPAWEHLQLLST*AALVHL
Trigger: GAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTG...TAGGTGTTCCCAGGCAGGATAGTAAAGGCCTCTACGCCGATACTCGGGAGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574911.5
CDS-3UTR CCA 90 bp GCTGCAGCTCTTATCTACCTGGGCGGCACTGGTGCACCTCTGAGGTCAGGTCCGCTCCAGAGAGGAGAGTaGGAAACAAATGAGGTATCT +
Preference number: 4 (lower is better)
Translates to: AAALIYLGGTGAPLRSGPLQRGE*ETNEVS
Trigger: AGATACCTCATTTGTTTCCCACTCTCCTCTCTGGAG...CGGACCTGACCTCAGAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp AGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACAAGGTGGAGGTTGCAGTaGGCCGAGATCGTGCCATTG +
Preference number: 4 (lower is better)
Translates to: SSATSKDRQDPGCTVCTTRWRLQ*AEIVPL
Trigger: CAATGGCACGATCTCGGCCCACTGCAACCTCCACCT...TGTTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp GGGGGAGGTTCCTACTGCGCGCCCCACCCTGTGCAAGAATGTCAGGCTTTAGGGCTTAGAACTGAATCCTaGAGAGAGCTGAGACTCTTC +
Preference number: 4 (lower is better)
Translates to: GGGSYCAPHPVQECQALGLRTES*RELRLF
Trigger: GAAGAGTCTCAGCTCTCTCCAGGATTCAGTTCTAAG...CCCTAAAGCCTGACATTCTTGCACAGGGTGGGGCGCGCAGTAGGAACCTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp GCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAGGGACCTCAAGATGTTaGTCTTCAATAGGGCACCTT +
Preference number: 4 (lower is better)
Translates to: AGRFPPLPPRRMSNKHLGGTSRC*SSIGHL
Trigger: AAGGTGCCCTATTGAAGACCAACATCTTGAGGTCCC...TCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp GAGGTAGAAACAGCTCTGTGCACAGTCTGTAGGGCTAGTGAGATCAAGATACATGGGCGAGGGCTGCACTaGGTGCTGGGACCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: EVETALCTVCRASEIKIHGRGLH*VLGPRV
Trigger: GACCCTTGGTCCCAGCACCCAGTGCAGCCCTCGCCC...ATGTATCTTGATCTCACTAGCCCTACAGACTGTGCACAGAGCTGTTTCTACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CAA 72 bp GGCTGCACTGGGTGCTGGGACCAAGGGTCCAGGGGCTaGGATCTCTTGTTTACAAACCCCTACTTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: GCTGCWDQGSRG*DLLFTNPYFFP
Trigger: AGGAAAGAAGTAGGGGTTTGTAAACAAGAGATCCAAGCCCCTGGACCCTTGGTCCCAGCACCCAGTGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp GCTGCAGCTCTTATCTACCTGGGCGGCACTGGTGCACCTCTGAGGTCAGGTCCGTCCAACCATTCGATGTaGGCTGGAGGATATTCTTTA +
Preference number: 4 (lower is better)
Translates to: AAALIYLGGTGAPLRSGPSNHSM*AGGYSL
Trigger: TAAAGAATATCCTCCAGCTCACATCGAATGGTTGGA...CGGACCTGACCTCAGAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp CGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAACACTGCGGAGGGTGACTGTGTaGGCAGGAGCGAGAGGGCGC +
Preference number: 4 (lower is better)
Translates to: RFITISNAHVPANRRKTLRRVTV*AGARGR
Trigger: GCGCCCTCTCGCTCCTGCTCACACAGTCACCCTCCG...CAGTGTTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR TCA 90 bp CAGGACTCTGCCTCTGAACCAGAGCTGCTTTCCCGACTAACTTCAATCTGGAGAAAGAGGCCCATGCCATaGGCAATCCCCGAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: QDSASEPELLSRLTSIWRKRPMP*AIPEGR
Trigger: TCTTCCCTCGGGGATTGCTCATGGCATGGGCCTCTT...TCTCCAGATTGAAGTTAGTCGGGAAAGCAGCTCTGGTTCAGAGGCAGAGTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574911.5
CDS-3UTR TCA 90 bp GCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGATTGAGCCCAGGAGTTTaGGTCCAATCTAGACAACAT +
Preference number: 4 (lower is better)
Translates to: AGRFPPLPPRRMSNKHLGLSPGV*VQSRQH
Trigger: ATGTTGTCTAGATTGGACTCAAACTCCTGGGCTCAA...TCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp AATTCATTCATTTACCAAACACTTTCGAAGCACTACTTACTCTGGGCTGGCCTGCTCCGCTCCCGGGGCTaGTTGAGAGCCGGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: NSFIYQTLSKHYLLWAGLLRSRG*LRAGSS
Trigger: GGAGCTCCCGGCTCTCAAGCAGCCCCGGGAGCGGAG...CAGGCCAGCCCAGAGTAAGTAGTGCTTCGAAAGTGTTTGGTAAATGAATGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp TTGGGTGCAGATCCTAGGCGAGTCCATAAATTACCTGATTTCTTCTCCCGAGTAGGGGGAGGTTCCTACTaGGCGCCCCACCCTGTGCAA +
Preference number: 4 (lower is better)
Translates to: LGADPRRVHKLPDFFSRVGGGSY*APHPVQ
Trigger: TTGCACAGGGTGGGGCGCGCAGTAGGAACCTCCCCC...TACTCGGGAGAAGAAATCAGGTAATTTATGGACTCGCCTAGGATCTGCACCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574911.5
CDS-3UTR GCA 90 bp TTAGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACACGTAAGAGGCCCATaGCATGAGCAATCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: LAPPQVKIDRIQAALCAQHVRGP*HEQSPR
Trigger: CCTCGGGGATTGCTCATGGCATGGGCCTCTTACGTG...TTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR GCA 90 bp ATGAGACACACAGGGGTCCGTAAAGCCCACCTGGCGGTAGCTGCTTTCCCCACAACCACAAGACATCTTTaGCCCGTCAGTAGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: MRHTGVRKAHLAVAAFPTTTRHL*PVSRSR
Trigger: TCTGCTTCTACTGACGGGGCAAAGATGTCTTGTGGT...TGTGGGGAAAGCAGCTACCGCCAGGTGGGCTTTACGGACCCCTGTGTGTCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp CCCGAGTATCGGCGTAGAGGCCTTTACTATCCTGCCTGGGAACACCTAGCCTACAACCGGCTCTTCTTTTaGCGAGACTGCTCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: PEYRRRGLYYPAWEHLAYNRLFF*RDCSFS
Trigger: GGAGAAAGAGCAGTCTCGCCAAAAGAAGAGCCGGTT...GTAGGCTAGGTGTTCCCAGGCAGGATAGTAAAGGCCTCTACGCCGATACTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574911.5
CDS-3UTR CCA 90 bp GCTGCAGCTCTTATCTACCTGGGCGGCACTGGTGCACCTCTGAGGTCAGGTCCGATGGACCTGAGCTGCTaGTGTAAAACCAAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: AAALIYLGGTGAPLRSGPMDLSC*CKTKRK
Trigger: TTTCCTTTTGGTTTTACACCAGCAGCTCAGGTCCAT...CGGACCTGACCTCAGAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp TTAGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAAGGGTGCTCACCATGTTaGCATCCTCCGGCCTCAGAT +
Preference number: 4 (lower is better)
Translates to: LAPPQVKIDRIQAALCAQGCSPC*HPPASD
Trigger: ATCTGAGGCCGGAGGATGCCAACATGGTGAGCACCC...TTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp TGCTGCACCTGCGGCCTGCCTCAGTTCCCAAGCTCCCCAAAAGTGATCTTCTCGCACGCAGCACAAGGCTaGCTGTTTGACAAATACACA +
Preference number: 4 (lower is better)
Translates to: CCTCGLPQFPSSPKVIFSHAAQG*LFDKYT
Trigger: TGTGTATTTGTCAAACAGCCAGCCTTGTGCTGCGTG...CGAGAAGATCACTTTTGGGGAGCTTGGGAACTGAGGCAGGCCGCAGGTGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp AGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACATCAGGGCTCTCTTCTTaGTCACGTCCCGCTGAATAC +
Preference number: 4 (lower is better)
Translates to: SSATSKDRQDPGCTVCTTSGLSS*SRPAEY
Trigger: GTATTCAGCGGGACGTGATCAAGAAGAGAGCCCTGA...TGTTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR TCA 90 bp AGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACAGAGCCACTGGAGGAATaGGCTCTGCTCTTTTCACCT +
Preference number: 4 (lower is better)
Translates to: SSATSKDRQDPGCTVCTTEPLEE*ALLFSP
Trigger: AGGTGAAAAGAGCAGAGCTCATTCCTCCAGTGGCTC...TGTTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp TTTTCTCAAAGGGTAAAGCCTGTGGGGTGGTGGGAAAGGAATCGAGGGCCCAGATGTACCATGGGCATGTaGGAGGCTGTCCCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: FSQRVKPVGWWERNRGPRCTMGM*EAVPVL
Trigger: AAGAACAGGGACAGCCTCTCACATGCCCATGGTACA...TCTGGGCCCTCGATTCCTTTCCCACCACCCCACAGGCTTTACCCTTTGAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp GGTGAGCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGTTTTCATATCTTCTaGTCGTGTCCGGGATCAGTT +
Preference number: 4 (lower is better)
Translates to: GELAASLLFPLEGCPISTCFHIF*SCPGSV
Trigger: AACTGATCCCGGACACGAGCAGAAGATATGAAAACA...GGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGCTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp CGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAACACTGGGGGGAGGTTCCTACTaGGCGCCCCACCCTGTGCAA +
Preference number: 4 (lower is better)
Translates to: RFITISNAHVPANRRKTLGGGSY*APHPVQ
Trigger: TTGCACAGGGTGGGGCGCGCAGTAGGAACCTCCCCC...CAGTGTTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR GCA 90 bp CGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAACACTGCCTGGGCGGCACTGGTaGACCTCTGAGGTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: RFITISNAHVPANRRKTLPGRHW*TSEVRS
Trigger: GGACCTGACCTCAGAGGTGCACCAGTGCCGCCCAGG...CAGTGTTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR GCA 90 bp ATGAGACACACAGGGGTCCGTAAAGCCCACCTGGCGGTAGCTGCTTTCCCCACATGGCTCTCAGCTGTATaGTTCACAGGGAAAGAAAAG +
Preference number: 4 (lower is better)
Translates to: MRHTGVRKAHLAVAAFPTWLSAV*FTGKEK
Trigger: CTTTTCTTTCCCTGTGAAGCATACAGCTGAGAGCCA...TGTGGGGAAAGCAGCTACCGCCAGGTGGGCTTTACGGACCCCTGTGTGTCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp ATGAGACACACAGGGGTCCGTAAAGCCCACCTGGCGGTAGCTGCTTTCCCCACACAAATGGACCTGAGCTaGTGGTGTAAAACCAAAAGG +
Preference number: 4 (lower is better)
Translates to: MRHTGVRKAHLAVAAFPTQMDLS*WCKTKR
Trigger: CCTTTTGGTTTTACACCAGCAGCTCAGGTCCATTTG...TGTGGGGAAAGCAGCTACCGCCAGGTGGGCTTTACGGACCCCTGTGTGTCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp AGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACAACAGGCCAGGGATACTaGCAGAGGATAGACCTTGGT +
Preference number: 4 (lower is better)
Translates to: SSATSKDRQDPGCTVCTTTGQGY*QRIDLG
Trigger: ACCAAGGTCTATCCTCTGGCAGTATCCCTGGCCTGT...TGTTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp AATTCATTCATTTACCAAACACTTTCGAAGCACTACTTACTCTGGGCTGGCCTGGCCCGGGCAAGCTCATaGCTCTGCTGCACCTGCGGC +
Preference number: 4 (lower is better)
Translates to: NSFIYQTLSKHYLLWAGLARASS*LCCTCG
Trigger: GCCGCAGGTGCAGCAGAGGCATGAGCTTGCCCGGGC...CAGGCCAGCCCAGAGTAAGTAGTGCTTCGAAAGTGTTTGGTAAATGAATGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp GGTGAGCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCAAGTTTGAGGAATGCTaGTTTAGGCAAAAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: GELAASLLFPLEGCPISTKFEEC*FRQKSH
Trigger: GTGGCTCTTTTGCCTAAAGCAGCATTCCTCAAACTT...GGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGCTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp GCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGATGTGAAGCCATGGTTTaGTGTGGCTTCACAGTAAAT +
Preference number: 4 (lower is better)
Translates to: AGRFPPLPPRRMSNKHLGCEAMV*CGFTVN
Trigger: ATTTACTGTGAAGCCACAGCAAACCATGGCTTCACA...TCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp GCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGATTCTATTCTCCCACTTaGCTTCTGACTCTTAGGAAG +
Preference number: 4 (lower is better)
Translates to: AGRFPPLPPRRMSNKHLGFYSPT*LLTLRK
Trigger: CTTCCTAAGAGTCAGAAGGCAAGTGGGAGAATAGAA...TCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp CTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAATTGACTTTTCTTGCAGTGAGCCGAGACTaGGCCATTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LLFPLEGCPISTWELTFLAVSRD*AIALQP
Trigger: AGGCTGGAGTGCAATGGCGCAGTCTCGGCTCACTGC...AAGAAAAGTCAATTCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp GCCCATGTTCCAGCAAACCGAAGAAAAACACTGTTTCTTAAAACTGCAGAGGAACTGGGAGGCGGAGGGTaGAGTGAGCCGAGACTGCGC +
Preference number: 4 (lower is better)
Translates to: AHVPANRRKTLFLKTAEELGGGG*SEPRLR
Trigger: GCGCAGTCTCGGCTCACTGCACCCTCCGCCTCCCAG...TTCCTCTGCAGTTTTAAGAAACAGTGTTTTTCTTCGGTTTGCTGGAACATGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp AGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACAGAGAAGGAAGATCAGTaGTGGCCAGAGGCTAAGAGG +
Preference number: 4 (lower is better)
Translates to: SSATSKDRQDPGCTVCTTEKEDQ*WPEAKR
Trigger: CCTCTTAGCCTCTGGCCACCACTGATCTTCCTTCTC...TGTTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp GGTGAGCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCAATGATACAGCTGCTTaGAAAAACCACCTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: GELAASLLFPLEGCPISTNDTAA*KNHLVV
Trigger: AACCACCAGGTGGTTTTTCCAAGCAGCTGTATCATT...GGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGCTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp ATGAGACACACAGGGGTCCGTAAAGCCCACCTGGCGGTAGCTGCTTTCCCCACAGCTTCAGCTCCGACATaGCCAGATCATCAAAATTTG +
Preference number: 4 (lower is better)
Translates to: MRHTGVRKAHLAVAAFPTASAPT*PDHQNL
Trigger: CAAATTTTGATGATCTGGCCATGTCGGAGCTGAAGC...TGTGGGGAAAGCAGCTACCGCCAGGTGGGCTTTACGGACCCCTGTGTGTCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp CTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAATTGACTTTTCTTCTGATGACTGGGTGCTaGACAGGGAGCAGGGCCACT +
Preference number: 4 (lower is better)
Translates to: LLFPLEGCPISTWELTFLLMTGC*TGSRAT
Trigger: AGTGGCCCTGCTCCCTGTCCAGCACCCAGTCATCAG...AAGAAAAGTCAATTCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp GGTGAGCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCCATGCTTTTCTTTGGTaGAGGCGTGGAAATCATTTT +
Preference number: 4 (lower is better)
Translates to: GELAASLLFPLEGCPISTHAFLW*RRGNHF
Trigger: AAAATGATTTCCACGCCTTCACCAAAGAAAAGCATG...GGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGCTCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR TCA 90 bp GCTGCAGCTCTTATCTACCTGGGCGGCACTGGTGCACCTCTGAGGTCAGGTCCGCTAATATTTTTCAACTaGGATTCCACTTCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: AAALIYLGGTGAPLRSGPLIFFN*DSTSSA
Trigger: TGCTGACGAAGTGGAATCTCAGTTGAAAAATATTAG...CGGACCTGACCTCAGAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR TCA 90 bp CTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAATTGACTTTTCTTGCGCCAGGCGCCCTGTaGTCCACTTTCTTCGTATTC +
Preference number: 4 (lower is better)
Translates to: LLFPLEGCPISTWELTFLAPGAL*STFFVF
Trigger: GAATACGAAGAAAGTGGATCACAGGGCGCCTGGCGC...AAGAAAAGTCAATTCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR TCA 90 bp CTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAATTGACTTTTCTTAAGAGGCCCATGCCATaGGCAATCCCCGAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: LLFPLEGCPISTWELTFLKRPMP*AIPEGR
Trigger: TCTTCCCTCGGGGATTGCTCATGGCATGGGCCTCTT...AAGAAAAGTCAATTCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR TCA 90 bp TTTTCTCAAAGGGTAAAGCCTGTGGGGTGGTGGGAAAGGAATCGAGGGCCCAGAAAAGACGACACCACTTaGGCTTCCCCTTTAGCCAAC +
Preference number: 4 (lower is better)
Translates to: FSQRVKPVGWWERNRGPRKDDTT*ASPLAN
Trigger: GTTGGCTAAAGGGGAAGCTCAAGTGGTGTCGTCTTT...TCTGGGCCCTCGATTCCTTTCCCACCACCCCACAGGCTTTACCCTTTGAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR TCA 90 bp AGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACATCAAAGACCCAGTTTTaGCTGCACACCACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SSATSKDRQDPGCTVCTTSKTQF*LHTTSF
Trigger: GAAGGAGGTGGTGTGCAGTCAAAACTGGGTCTTTGA...TGTTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp GGGGGAGGTTCCTACTGCGCGCCCCACCCTGTGCAAGAATGTCAGGCTTTAGGGAGAGTGGGAAACAAATaGGGTATCTGCAATTATCAT +
Preference number: 4 (lower is better)
Translates to: GGGSYCAPHPVQECQALGRVGNK*GICNYH
Trigger: ATGATAATTGCAGATACCTCATTTGTTTCCCACTCT...CCCTAAAGCCTGACATTCTTGCACAGGGTGGGGCGCGCAGTAGGAACCTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp GCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGATGGTGGAATGGAAAATaGTACAGCTGCTTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: AGRFPPLPPRRMSNKHLGWWNGK*YSCLEK
Trigger: TTTTTCCAAGCAGCTGTATCATTTTCCATTCCACCA...TCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp TTTTCTCAAAGGGTAAAGCCTGTGGGGTGGTGGGAAAGGAATCGAGGGCCCAGACTCCCACTTGCCTTCTaGCTCTTAGGAAGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: FSQRVKPVGWWERNRGPRLPLAF*LLGSQK
Trigger: TTTCTGGCTTCCTAAGAGTCAGAAGGCAAGTGGGAG...TCTGGGCCCTCGATTCCTTTCCCACCACCCCACAGGCTTTACCCTTTGAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp ATGAGACACACAGGGGTCCGTAAAGCCCACCTGGCGGTAGCTGCTTTCCCCACACAAACATCAATGTCATaGAAGACAGAAAGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: MRHTGVRKAHLAVAAFPTQTSMS*KTERLR
Trigger: CCTCAGCCTTTCTGTCTTTCATGACATTGATGTTTG...TGTGGGGAAAGCAGCTACCGCCAGGTGGGCTTTACGGACCCCTGTGTGTCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp ATGAGACACACAGGGGTCCGTAAAGCCCACCTGGCGGTAGCTGCTTTCCCCACATTGTCTGCTTTGCTCTaGCAAAGTGCTTATGACTAC +
Preference number: 4 (lower is better)
Translates to: MRHTGVRKAHLAVAAFPTLSALL*QSAYDY
Trigger: GTAGTCATAAGCACTTTGTCAGAGCAAAGCAGACAA...TGTGGGGAAAGCAGCTACCGCCAGGTGGGCTTTACGGACCCCTGTGTGTCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp TTTTCTCAAAGGGTAAAGCCTGTGGGGTGGTGGGAAAGGAATCGAGGGCCCAGACACCACTCTGTCATCTaGATCCATGTCCTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: FSQRVKPVGWWERNRGPRHHSVI*IHVLVF
Trigger: GAAGACCAGGACATGGATGCAGATGACAGAGTGGTG...TCTGGGCCCTCGATTCCTTTCCCACCACCCCACAGGCTTTACCCTTTGAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR GCA 90 bp TCTTCTCCCGAGTATCGGCGTAGAGGCCTTTACTATCCTGCCTGGGAACACCTAAGGCCTTTACTATCCTaGCTGGGAACACCTAGCCTA +
Preference number: 4 (lower is better)
Translates to: SSPEYRRRGLYYPAWEHLRPLLS*LGTPSL
Trigger: TAGGCTAGGTGTTCCCAGGCAGGATAGTAAAGGCCT...TAGGTGTTCCCAGGCAGGATAGTAAAGGCCTCTACGCCGATACTCGGGAGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574911.5
CDS-3UTR GCA 90 bp CCAGAACTGGGCTGGGTTACCATAATTCATTCATTTACCAAACACTTTCGAAGCCCCGGAGGTGGAGGTTaGAGTGGGCCGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: PELGWVTIIHSFTKHFRSPGGGG*SGPRSC
Trigger: GCACGATCTCGGCCCACTGCAACCTCCACCTCCGGG...GCTTCGAAAGTGTTTGGTAAATGAATGAATTATGGTAACCCAGCCCAGTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp CGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAACACTGTGCCTCTGCTGCACCTaGGGCCTGCCTCAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: RFITISNAHVPANRRKTLCLCCT*GLPQFP
Trigger: TGGGAACTGAGGCAGGCCGCAGGTGCAGCAGAGGCA...CAGTGTTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp GAGGTAGAAACAGCTCTGTGCACAGTCTGTAGGGCTAGTGAGATCAAGATACATAGTACTGCTGACTGGTaGCCGTGGACGGGAGTGCTG +
Preference number: 4 (lower is better)
Translates to: EVETALCTVCRASEIKIHSTADW*PWTGVL
Trigger: CAGCACTCCCGTCCACGGCCACCAGTCAGCAGTACT...ATGTATCTTGATCTCACTAGCCCTACAGACTGTGCACAGAGCTGTTTCTACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp GGGGGAGGTTCCTACTGCGCGCCCCACCCTGTGCAAGAATGTCAGGCTTTAGGGCTTTTTCCTAACCGCTaGCGTATATCTGATTTAGTA +
Preference number: 4 (lower is better)
Translates to: GGGSYCAPHPVQECQALGLFPNR*RISDLV
Trigger: TACTAAATCAGATATACGCCAGCGGTTAGGAAAAAG...CCCTAAAGCCTGACATTCTTGCACAGGGTGGGGCGCGCAGTAGGAACCTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR CCA 90 bp GGTGAGCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTCGTATTCTTTTCTTTaGTCTTGGGTGCAGATCCTA +
Preference number: 4 (lower is better)
Translates to: GELAASLLFPLEGCPISTSYSFL*SWVQIL
Trigger: TAGGATCTGCACCCAAGACCAAAGAAAAGAATACGA...GGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGCTCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR CCA 90 bp GGGGGAGGTTCCTACTGCGCGCCCCACCCTGTGCAAGAATGTCAGGCTTTAGGGCGACTAACTTCAATCTaGAGAGATGGTAAGTTATCT +
Preference number: 4 (lower is better)
Translates to: GGGSYCAPHPVQECQALGRLTSI*RDGKLS
Trigger: AGATAACTTACCATCTCTCCAGATTGAAGTTAGTCG...CCCTAAAGCCTGACATTCTTGCACAGGGTGGGGCGCGCAGTAGGAACCTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR CCA 90 bp AATTCATTCATTTACCAAACACTTTCGAAGCACTACTTACTCTGGGCTGGCCTGCCGGCCTCAGATCTGTaGGGGACTGCGGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: NSFIYQTLSKHYLLWAGLPASDL*GTAGVM
Trigger: CATCACCCCCGCAGTCCCCCACAGATCTGAGGCCGG...CAGGCCAGCCCAGAGTAAGTAGTGCTTCGAAAGTGTTTGGTAAATGAATGAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp CTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAATTGACTTTTCTTTGGGGAGAGTCACAGTaGTCTCCTCTCCCCCGCATT +
Preference number: 4 (lower is better)
Translates to: LLFPLEGCPISTWELTFLWGESQ*SPLPRI
Trigger: AATGCGGGGGAGAGGAGACCACTGTGACTCTCCCCA...AAGAAAAGTCAATTCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp AGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACAGCAAAATTCCAGGTCTaGTGGTTTTCCTGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: SSATSKDRQDPGCTVCTTAKFQV*WFSCQV
Trigger: GACCTGGCAGGAAAACCACCAGACCTGGAATTTTGC...TGTTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp GAGGTAGAAACAGCTCTGTGCACAGTCTGTAGGGCTAGTGAGATCAAGATACATGCACTGGTGCACCTCTaGGGTCAGGTCCGTGAGATT +
Preference number: 4 (lower is better)
Translates to: EVETALCTVCRASEIKIHALVHL*GQVREI
Trigger: AATCTCACGGACCTGACCTCAGAGGTGCACCAGTGC...ATGTATCTTGATCTCACTAGCCCTACAGACTGTGCACAGAGCTGTTTCTACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp GCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAATGATCCCATTTATATaGACTATCCAGAACAGGCAA +
Preference number: 4 (lower is better)
Translates to: AGRFPPLPPRRMSNKHLGMIPFI*TIQNRQ
Trigger: TTGCCTGTTCTGGATAGTTCATATAAATGGGATCAT...TCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp GACCACGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAAGGTGGGAGAATTGCTTaGACCTGGGAGGCGGAGGGT +
Preference number: 4 (lower is better)
Translates to: DHGLLPSLTPMFQQTEEKGGRIA*TWEAEG
Trigger: ACCCTCCGCCTCCCAGGTTCAAGCAATTCTCCCACC...TTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCGTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp GGTGAGCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCACGGATAAACGAGCATaGTGTATACAAATAATCCTC +
Preference number: 4 (lower is better)
Translates to: GELAASLLFPLEGCPISTTDKRA*CIQIIL
Trigger: GAGGATTATTTGTATACATCATGCTCGTTTATCCGT...GGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGCTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp TTTTCTCAAAGGGTAAAGCCTGTGGGGTGGTGGGAAAGGAATCGAGGGCCCAGACAGCCCCATTCGCTTTaGGATGTGAATGTGTTAACC +
Preference number: 4 (lower is better)
Translates to: FSQRVKPVGWWERNRGPRQPHSL*DVNVLT
Trigger: GGTTAACACATTCACATCTCAAAGCGAATGGGGCTG...TCTGGGCCCTCGATTCCTTTCCCACCACCCCACAGGCTTTACCCTTTGAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp TTAGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAAGAAGATGTCTTCAGGTaGCACAACGTGGGGACAGAA +
Preference number: 4 (lower is better)
Translates to: LAPPQVKIDRIQAALCAQEDVFR*HNVGTE
Trigger: TTCTGTCCCCACGTTGTGGCACCTGAAGACATCTTC...TTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR GCA 90 bp AGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACACACCACAAACTCTCCTaGCTTCAGCTCTTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: SSATSKDRQDPGCTVCTTHHKLS*LQLFWC
Trigger: ACACCAAAAGAGCTGAAGGCAGGAGAGTTTGTGGTG...TGTTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp CGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAACACTGACCAGAGCCCAGGGCTaGAGAGCAGTGGTACTCACG +
Preference number: 4 (lower is better)
Translates to: RFITISNAHVPANRRKTLTRAQG*RAVVLT
Trigger: CGTGAGTACCACTGCTCTGCAGCCCTGGGCTCTGGT...CAGTGTTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp CTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAATTGACTTTTCTTTTTAGTACTGCTGACTaGTGGCCGTGGACGGGAGTG +
Preference number: 4 (lower is better)
Translates to: LLFPLEGCPISTWELTFLFSTAD*WPWTGV
Trigger: CACTCCCGTCCACGGCCACCAGTCAGCAGTACTAAA...AAGAAAAGTCAATTCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR CCA 90 bp TTTTCTCAAAGGGTAAAGCCTGTGGGGTGGTGGGAAAGGAATCGAGGGCCCAGACGCCACAAATTATCCTaGGTACCTGGTAACTCTCCA +
Preference number: 4 (lower is better)
Translates to: FSQRVKPVGWWERNRGPRRHKLS*VPGNSP
Trigger: TGGAGAGTTACCAGGTACCCAGGATAATTTGTGGCG...TCTGGGCCCTCGATTCCTTTCCCACCACCCCACAGGCTTTACCCTTTGAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp GCCCATGTTCCAGCAAACCGAAGAAAAACACTGTTTCTTAAAACTGCAGAGGAAGGAGGGGGAGAAGCCTaGGCGGAAGCATGTCACTGG +
Preference number: 4 (lower is better)
Translates to: AHVPANRRKTLFLKTAEEGGGEA*AEACHW
Trigger: CCAGTGACATGCTTCCGCCCAGGCTTCTCCCCCTCC...TTCCTCTGCAGTTTTAAGAAACAGTGTTTTTCTTCGGTTTGCTGGAACATGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp GGTGAGCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCCAAATAATCCTCAAATaGTTCATGGTTCAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: GELAASLLFPLEGCPISTQIILK*FMVQRG
Trigger: TCCTCTCTGAACCATGAACCATTTGAGGATTATTTG...GGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGCTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp TTAGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAATTGAGAACTGTACCATaGGCATGTGAGAGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: LAPPQVKIDRIQAALCAQLRTVP*ACERLS
Trigger: GGACAGCCTCTCACATGCCCATGGTACAGTTCTCAA...TTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp TTCCTTTCATGCCTCCATAATTTGGATTCCCATATTTCATGTAATACTGACTTCGCTCCCGGGGCTGCTTaGGAGCCGGGAGCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: FLSCLHNLDSHISCNTDFAPGAA*EPGAPR
Trigger: ACGAGGAGCTCCCGGCTCTCAAGCAGCCCCGGGAGC...GAAGTCAGTATTACATGAAATATGGGAATCCAAATTATGGAGGCATGAAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574911.5
CDS-3UTR TCA 90 bp CGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAACACTGTGCCAGCTGGGACGCTaGCCACAAGACATCTTTGCC +
Preference number: 4 (lower is better)
Translates to: RFITISNAHVPANRRKTLCQLGR*PQDIFA
Trigger: GGCAAAGATGTCTTGTGGTCAGCGTCCCAGCTGGCA...CAGTGTTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp CTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAATTGACTTTTCTTCAAGATCTGAGTGACTaGGAGTGGGCAGGAGGGTTA +
Preference number: 4 (lower is better)
Translates to: LLFPLEGCPISTWELTFLQDLSD*EWAGGL
Trigger: TAACCCTCCTGCCCACTCTCAGTCACTCAGATCTTG...AAGAAAAGTCAATTCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp TTTTCTCAAAGGGTAAAGCCTGTGGGGTGGTGGGAAAGGAATCGAGGGCCCAGACAACTAATTCATCTGTaGAGCCATGGTTTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: FSQRVKPVGWWERNRGPRQLIHL*SHGLLW
Trigger: CCACAGCAAACCATGGCTTCACAGATGAATTAGTTG...TCTGGGCCCTCGATTCCTTTCCCACCACCCCACAGGCTTTACCCTTTGAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp TGCTGCACCTGCGGCCTGCCTCAGTTCCCAAGCTCCCCAAAAGTGATCTTCTCGGTGATGGTGACAATTTaGGATAACACAAAGTCTCAA +
Preference number: 4 (lower is better)
Translates to: CCTCGLPQFPSSPKVIFSVMVTI*DNTKSQ
Trigger: TTGAGACTTTGTGTTATCTCAAATTGTCACCATCAC...CGAGAAGATCACTTTTGGGGAGCTTGGGAACTGAGGCAGGCCGCAGGTGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp CTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAATTGACTTTTCTTCCACCAAGCCCGGCCTaGGAATTCTCTTCTGTCAAT +
Preference number: 4 (lower is better)
Translates to: LLFPLEGCPISTWELTFLPPSPA*EFSSVN
Trigger: ATTGACAGAAGAGAATTCTCAGGCCGGGCTTGGTGG...AAGAAAAGTCAATTCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp TTAGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAAAAGCACAGTCAATGCTaGAGCTCTTATCTACCTGGG +
Preference number: 4 (lower is better)
Translates to: LAPPQVKIDRIQAALCAQKHSQC*SSYLPG
Trigger: CCCAGGTAGATAAGAGCTGCAGCATTGACTGTGCTT...TTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR GCA 90 bp CCAGAACTGGGCTGGGTTACCATAATTCATTCATTTACCAAACACTTTCGAAGCGCGATCTCACCTCACTaGAACCTCTGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: PELGWVTIIHSFTKHFRSAISPH*NLCLPG
Trigger: ACCCGGGAGGCAGAGGTTGCAGTGAGGTGAGATCGC...GCTTCGAAAGTGTTTGGTAAATGAATGAATTATGGTAACCCAGCCCAGTTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp CGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAACACTGGCTAAAGATGCTGCCTaGCTCTCACAGGCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: RFITISNAHVPANRRKTLAKDAA*LSQALR
Trigger: CCTCAGGGCCTGTGAGAGGCAGGCAGCATCTTTAGC...CAGTGTTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp GAGGTAGAAACAGCTCTGTGCACAGTCTGTAGGGCTAGTGAGATCAAGATACATCCACCTGGCGGTAGCTaGTTTCCCCACAAACCCAAA +
Preference number: 4 (lower is better)
Translates to: EVETALCTVCRASEIKIHPPGGS*FPHKPK
Trigger: TTTGGGTTTGTGGGGAAAGCAGCTACCGCCAGGTGG...ATGTATCTTGATCTCACTAGCCCTACAGACTGTGCACAGAGCTGTTTCTACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp AGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACATCTCCAGTCTCACCTTaGGGATTGCTTTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: SSATSKDRQDPGCTVCTTSPVSP*GLLSSS
Trigger: TGATGAAGAAAGCAATCCCCAAGGTGAGACTGGAGA...TGTTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp GAGAGCAGCCCAGTCACTGAGCAGATCCCTGCTAGGGCAGGGCTAGAACCCAGACATGCCTCCATAATTTaGATTCCCATATTTCATGTA +
Preference number: 4 (lower is better)
Translates to: ESSPVTEQIPARAGLEPRHASII*IPIFHV
Trigger: TACATGAAATATGGGAATCCAAATTATGGAGGCATG...TCTGGGTTCTAGCCCTGCCCTAGCAGGGATCTGCTCAGTGACTGGGCTGCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp CTAGATCTTGCTCGGTTATGTGAGATTACAATTCACCGGTTTCCATCCTGTATGGCCGGGAGCTCCTCGTaGTACTCTACCACCACTCTG +
Preference number: 4 (lower is better)
Translates to: LDLARLCEITIHRFPSCMAGSSS*YSTTTL
Trigger: CAGAGTGGTGGTAGAGTACCACGAGGAGCTCCCGGC...CATACAGGATGGAAACCGGTGAATTGTAATCTCACATAACCGAGCAAGATCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp GCCCATGTTCCAGCAAACCGAAGAAAAACACTGTTTCTTAAAACTGCAGAGGAAGCCGGGAGCTCCTCGTaGTACTCTACCACCACTCTG +
Preference number: 4 (lower is better)
Translates to: AHVPANRRKTLFLKTAEEAGSSS*YSTTTL
Trigger: CAGAGTGGTGGTAGAGTACCACGAGGAGCTCCCGGC...TTCCTCTGCAGTTTTAAGAAACAGTGTTTTTCTTCGGTTTGCTGGAACATGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR CCA 90 bp CCAGAACTGGGCTGGGTTACCATAATTCATTCATTTACCAAACACTTTCGAAGCGCTGACTGGTGGCCGTaGACGGGAGTGCTGACGTTT +
Preference number: 4 (lower is better)
Translates to: PELGWVTIIHSFTKHFRSADWWP*TGVLTF
Trigger: AAACGTCAGCACTCCCGTCCACGGCCACCAGTCAGC...GCTTCGAAAGTGTTTGGTAAATGAATGAATTATGGTAACCCAGCCCAGTTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp GCCCATGTTCCAGCAAACCGAAGAAAAACACTGTTTCTTAAAACTGCAGAGGAAAAGCCTGTGGGGTGGTaGGAAAGGAATCGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: AHVPANRRKTLFLKTAEEKPVGW*ERNRGP
Trigger: GGGCCCTCGATTCCTTTCCCACCACCCCACAGGCTT...TTCCTCTGCAGTTTTAAGAAACAGTGTTTTTCTTCGGTTTGCTGGAACATGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR CCA 90 bp TGCTGCACCTGCGGCCTGCCTCAGTTCCCAAGCTCCCCAAAAGTGATCTTCTCGGAAAATAATGAGTGTTaGTGGAGATGTGGAGAAACT +
Preference number: 4 (lower is better)
Translates to: CCTCGLPQFPSSPKVIFSENNEC*WRCGET
Trigger: AGTTTCTCCACATCTCCACCAACACTCATTATTTTC...CGAGAAGATCACTTTTGGGGAGCTTGGGAACTGAGGCAGGCCGCAGGTGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp CTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAATTGACTTTTCTTGCCCTGAGGAGAAGATaGCCACATCACAGGATCGAA +
Preference number: 4 (lower is better)
Translates to: LLFPLEGCPISTWELTFLALRRR*PHHRIE
Trigger: TTCGATCCTGTGATGTGGCCATCTTCTCCTCAGGGC...AAGAAAAGTCAATTCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp AGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACAAGAAGACTTTGTGTTTaGAGTGTGAACGTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SSATSKDRQDPGCTVCTTRRLCV*SVNVRV
Trigger: CACCCTGACGTTCACACTCCAAACACAAAGTCTTCT...TGTTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp CCAGAACTGGGCTGGGTTACCATAATTCATTCATTTACCAAACACTTTCGAAGCGCGCTCCAAGGGCACTaGGGAGAGTCACAGTGGTCT +
Preference number: 4 (lower is better)
Translates to: PELGWVTIIHSFTKHFRSALQGH*GESQWS
Trigger: AGACCACTGTGACTCTCCCCAGTGCCCTTGGAGCGC...GCTTCGAAAGTGTTTGGTAAATGAATGAATTATGGTAACCCAGCCCAGTTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp TTTTCTCAAAGGGTAAAGCCTGTGGGGTGGTGGGAAAGGAATCGAGGGCCCAGAAATCAACTATCAATGTaGCCATTAGCTCCGCCACAA +
Preference number: 4 (lower is better)
Translates to: FSQRVKPVGWWERNRGPRNQLSM*PLAPPQ
Trigger: TTGTGGCGGAGCTAATGGTCACATTGATAGTTGATT...TCTGGGCCCTCGATTCCTTTCCCACCACCCCACAGGCTTTACCCTTTGAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR TCA 90 bp AATTCATTCATTTACCAAACACTTTCGAAGCACTACTTACTCTGGGCTGGCCTGGGAGCTCACCCCAGTTaGGCCCTCCATTTGACAGAC +
Preference number: 4 (lower is better)
Translates to: NSFIYQTLSKHYLLWAGLGAHPS*ALHLTD
Trigger: GTCTGTCAAATGGAGGGCTCAACTGGGGTGAGCTCC...CAGGCCAGCCCAGAGTAAGTAGTGCTTCGAAAGTGTTTGGTAAATGAATGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp AGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACATCCAAATTCATATGTTaGAGCCCTAACCCCCAATGT +
Preference number: 4 (lower is better)
Translates to: SSATSKDRQDPGCTVCTTSKFIC*SPNPQC
Trigger: ACATTGGGGGTTAGGGCTTCAACATATGAATTTGGA...TGTTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp TTAGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAATCTGATCTTATCCTGTaGAGGCAGGGAGCTCATATT +
Preference number: 4 (lower is better)
Translates to: LAPPQVKIDRIQAALCAQSDLIL*RQGAHI
Trigger: AATATGAGCTCCCTGCCTGCACAGGATAAGATCAGA...TTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp GCCCATGTTCCAGCAAACCGAAGAAAAACACTGTTTCTTAAAACTGCAGAGGAACGACAGGATCCAGGCTaGACTGTGTGCACAACAGCC +
Preference number: 4 (lower is better)
Translates to: AHVPANRRKTLFLKTAEERQDPG*TVCTTA
Trigger: GGCTGTTGTGCACACAGTGCAGCCTGGATCCTGTCG...TTCCTCTGCAGTTTTAAGAAACAGTGTTTTTCTTCGGTTTGCTGGAACATGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR GCA 90 bp AATTCATTCATTTACCAAACACTTTCGAAGCACTACTTACTCTGGGCTGGCCTGCCTGTCTACACCTCATaGGCGCCCTCAGTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: NSFIYQTLSKHYLLWAGLPVYTS*APSVVS
Trigger: GGAGACAACTGAGGGCGCGCATGAGGTGTAGACAGG...CAGGCCAGCCCAGAGTAAGTAGTGCTTCGAAAGTGTTTGGTAAATGAATGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp GACCACGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAACCGAGATCGTGCCATTaGACTCCAGCCTGCACAACA +
Preference number: 4 (lower is better)
Translates to: DHGLLPSLTPMFQQTEEKPRSCH*TPACTT
Trigger: TGTTGTGCAGGCTGGAGTGCAATGGCACGATCTCGG...TTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCGTGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp GCCCATGTTCCAGCAAACCGAAGAAAAACACTGTTTCTTAAAACTGCAGAGGAAGCTAGATGCCAGGCATaGTGGCAGGCACAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: AHVPANRRKTLFLKTAEEARCQA*WQAQGK
Trigger: TTTCCCCTGTGCCTGCCAGCATGCCTGGCATCTAGC...TTCCTCTGCAGTTTTAAGAAACAGTGTTTTTCTTCGGTTTGCTGGAACATGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp GAGGTAGAAACAGCTCTGTGCACAGTCTGTAGGGCTAGTGAGATCAAGATACATCTATGGTGGGAGAATTaGTTGAACCTGGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: EVETALCTVCRASEIKIHLWWEN*LNLGGG
Trigger: TCCGCCTCCCAGGTTCAAGCAATTCTCCCACCATAG...ATGTATCTTGATCTCACTAGCCCTACAGACTGTGCACAGAGCTGTTTCTACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp TTTTCTCAAAGGGTAAAGCCTGTGGGGTGGTGGGAAAGGAATCGAGGGCCCAGAAATGCGGACTCATCCTaGATCCATCCAGTATGTATT +
Preference number: 4 (lower is better)
Translates to: FSQRVKPVGWWERNRGPRNADSS*IHPVCI
Trigger: AATACATACTGGATGGATGCAGGATGAGTCCGCATT...TCTGGGCCCTCGATTCCTTTCCCACCACCCCACAGGCTTTACCCTTTGAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp TTTTCTCAAAGGGTAAAGCCTGTGGGGTGGTGGGAAAGGAATCGAGGGCCCAGAGGAATTGACTTTTCTTaGGAAAAGGGTGCTGGTAAC +
Preference number: 4 (lower is better)
Translates to: FSQRVKPVGWWERNRGPRGIDFS*EKGAGN
Trigger: GTTACCAGCACCCTTTTCCCAAGAAAAGTCAATTCC...TCTGGGCCCTCGATTCCTTTCCCACCACCCCACAGGCTTTACCCTTTGAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR CCA 90 bp GCCCATGTTCCAGCAAACCGAAGAAAAACACTGTTTCTTAAAACTGCAGAGGAACAGCTCTTATCTACCTaGGCGGCACTGGTGCACCTC +
Preference number: 4 (lower is better)
Translates to: AHVPANRRKTLFLKTAEEQLLST*AALVHL
Trigger: GAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTG...TTCCTCTGCAGTTTTAAGAAACAGTGTTTTTCTTCGGTTTGCTGGAACATGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR CCA 90 bp GCCCATGTTCCAGCAAACCGAAGAAAAACACTGTTTCTTAAAACTGCAGAGGAAAGCTGGAAAGGGCAGTaGCTGAAGAACGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: AHVPANRRKTLFLKTAEESWKGQ*LKNGEG
Trigger: CCCCTCTCCGTTCTTCAGCCACTGCCCTTTCCAGCT...TTCCTCTGCAGTTTTAAGAAACAGTGTTTTTCTTCGGTTTGCTGGAACATGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp CTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAATTGACTTTTCTTCTGTACAAATGCAGCTaGAAAGGGCAGTGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LLFPLEGCPISTWELTFLLYKCS*KGQWLK
Trigger: CTTCAGCCACTGCCCTTTCCAGCTGCATTTGTACAG...AAGAAAAGTCAATTCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp AGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACAATGCCAGAACTGGGCTaGGTTACCATAATTCATTCA +
Preference number: 4 (lower is better)
Translates to: SSATSKDRQDPGCTVCTTMPELG*VTIIHS
Trigger: TGAATGAATTATGGTAACCCAGCCCAGTTCTGGCAT...TGTTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp CTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAATTGACTTTTCTTTTCGGGAGGCTATGGTaGGAGAATTGCTTGAACCTG +
Preference number: 4 (lower is better)
Translates to: LLFPLEGCPISTWELTFLFGRLW*ENCLNL
Trigger: CAGGTTCAAGCAATTCTCCCACCATAGCCTCCCGAA...AAGAAAAGTCAATTCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp AATTCATTCATTTACCAAACACTTTCGAAGCACTACTTACTCTGGGCTGGCCTGCCACTGCACTCCACTTaGGTGACAGAGCGAGACTCC +
Preference number: 4 (lower is better)
Translates to: NSFIYQTLSKHYLLWAGLPLHST*VTERDS
Trigger: GGAGTCTCGCTCTGTCACCCAAGTGGAGTGCAGTGG...CAGGCCAGCCCAGAGTAAGTAGTGCTTCGAAAGTGTTTGGTAAATGAATGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp AGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACATCCTCAAATGGTTCATaGTTCAGAGAGGATAGGAAG +
Preference number: 4 (lower is better)
Translates to: SSATSKDRQDPGCTVCTTSSNGS*FREDRK
Trigger: CTTCCTATCCTCTCTGAACCATGAACCATTTGAGGA...TGTTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp CCAGAACTGGGCTGGGTTACCATAATTCATTCATTTACCAAACACTTTCGAAGCGGGAAAGCTGATGACTaGGTGCTGGACAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: PELGWVTIIHSFTKHFRSGKADD*VLDREQ
Trigger: CTGCTCCCTGTCCAGCACCCAGTCATCAGCTTTCCC...GCTTCGAAAGTGTTTGGTAAATGAATGAATTATGGTAACCCAGCCCAGTTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp CGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAACACTGTGGCATCCCTGCTTCTaGTCTTATCCTGTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: RFITISNAHVPANRRKTLWHPCF*SYPVQA
Trigger: TGCCTGCACAGGATAAGATCAGAAGCAGGGATGCCA...CAGTGTTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp GAGGTAGAAACAGCTCTGTGCACAGTCTGTAGGGCTAGTGAGATCAAGATACATCCGCTGGCGTATATCTaGTTTAGTACTGCTGACTGG +
Preference number: 4 (lower is better)
Translates to: EVETALCTVCRASEIKIHPLAYI*FSTADW
Trigger: CCAGTCAGCAGTACTAAATCAGATATACGCCAGCGG...ATGTATCTTGATCTCACTAGCCCTACAGACTGTGCACAGAGCTGTTTCTACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp CGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAACACTGGCAGGTGAAGAGTCGTaGCATCGCAAAAAGGACCAC +
Preference number: 4 (lower is better)
Translates to: RFITISNAHVPANRRKTLAGEES*HRKKDH
Trigger: GTGGTCCTTTTTGCGATGTCACGACTCTTCACCTGC...CAGTGTTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR TCA 90 bp GCCCATGTTCCAGCAAACCGAAGAAAAACACTGTTTCTTAAAACTGCAGAGGAAGGATGGAGCCACTCCTaGGGCTGGAGGGTTTACAAA +
Preference number: 4 (lower is better)
Translates to: AHVPANRRKTLFLKTAEEGWSHS*GWRVYK
Trigger: TTTGTAAACCCTCCAGCCTCAGGAGTGGCTCCATCC...TTCCTCTGCAGTTTTAAGAAACAGTGTTTTTCTTCGGTTTGCTGGAACATGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp CGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAACACTGTACATGGCAGAAAAATaGCTAGCCTGCCAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: RFITISNAHVPANRRKTLYMAEK*LACQRA
Trigger: GGCCCTCTGGCAGGCTAGTCATTTTTCTGCCATGTA...CAGTGTTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp GACCACGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAAGTGAGTCAAAAGCACTaGGGCACAGCCTTCAGACAC +
Preference number: 4 (lower is better)
Translates to: DHGLLPSLTPMFQQTEEKVSQKH*GTAFRH
Trigger: GTGTCTGAAGGCTGTGCCTCAGTGCTTTTGACTCAC...TTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCGTGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp CTAGATCTTGCTCGGTTATGTGAGATTACAATTCACCGGTTTCCATCCTGTATGTTTGTGTTTGGAGTGTaGACGTCAGGGTGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: LDLARLCEITIHRFPSCMFVFGV*TSGCLG
Trigger: CCCGAGGCACCCTGACGTTCACACTCCAAACACAAA...CATACAGGATGGAAACCGGTGAATTGTAATCTCACATAACCGAGCAAGATCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp TTTTCTCAAAGGGTAAAGCCTGTGGGGTGGTGGGAAAGGAATCGAGGGCCCAGACTCTTTCTTTTCAATTaGTTCCTTGGAGGTGACATC +
Preference number: 4 (lower is better)
Translates to: FSQRVKPVGWWERNRGPRLFLFN*FLGGDI
Trigger: GATGTCACCTCCAAGGAAGCAATTGAAAAGAAAGAG...TCTGGGCCCTCGATTCCTTTCCCACCACCCCACAGGCTTTACCCTTTGAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp TCAGTTCTAGATCATAGTCCATTTCATCTGAGTCTGAGCTGCTGGCACTGGATCCACCACTCTGTCATCTaGATCCATGTCCTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: SVLDHSPFHLSLSCWHWIHHSVI*IHVLVF
Trigger: GAAGACCAGGACATGGATGCAGATGACAGAGTGGTG...GATCCAGTGCCAGCAGCTCAGACTCAGATGAAATGGACTATGATCTAGAACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574911.5
CDS-3UTR GCA 90 bp TTTTCTCAAAGGGTAAAGCCTGTGGGGTGGTGGGAAAGGAATCGAGGGCCCAGAAGAAGTTCAGTTCTCTaGTCTTTGGATGAACTGTGT +
Preference number: 4 (lower is better)
Translates to: FSQRVKPVGWWERNRGPRRSSVL*SLDELC
Trigger: ACACAGTTCATCCAAAGAGCAGAGAACTGAACTTCT...TCTGGGCCCTCGATTCCTTTCCCACCACCCCACAGGCTTTACCCTTTGAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR GCA 90 bp CTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAATTGACTTTTCTTAAACCGCCACTGAGATaGACCAACAAAGCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: LLFPLEGCPISTWELTFLKPPLR*TNKARN
Trigger: ATTCCTGGCTTTGTTGGTGCATCTCAGTGGCGGTTT...AAGAAAAGTCAATTCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp GCCCATGTTCCAGCAAACCGAAGAAAAACACTGTTTCTTAAAACTGCAGAGGAAGGCGCCTCCTCCACCTaGAGTAGAAATTCATGCTGG +
Preference number: 4 (lower is better)
Translates to: AHVPANRRKTLFLKTAEEGASST*SRNSCW
Trigger: CCAGCATGAATTTCTACTGCAGGTGGAGGAGGCGCC...TTCCTCTGCAGTTTTAAGAAACAGTGTTTTTCTTCGGTTTGCTGGAACATGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp GAGGTAGAAACAGCTCTGTGCACAGTCTGTAGGGCTAGTGAGATCAAGATACATAAAGGTTCATCCCGCTaGAGTGTGCAGAATGGAGAC +
Preference number: 4 (lower is better)
Translates to: EVETALCTVCRASEIKIHKGSSR*SVQNGD
Trigger: GTCTCCATTCTGCACACTGCAGCGGGATGAACCTTT...ATGTATCTTGATCTCACTAGCCCTACAGACTGTGCACAGAGCTGTTTCTACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp CTAGATCTTGCTCGGTTATGTGAGATTACAATTCACCGGTTTCCATCCTGTATGCTGCCCAGGCTGGAGTaGAGTGGCTTGATCATAGCT +
Preference number: 4 (lower is better)
Translates to: LDLARLCEITIHRFPSCMLPRLE*SGLIIA
Trigger: AGCTATGATCAAGCCACTGCACTCCAGCCTGGGCAG...CATACAGGATGGAAACCGGTGAATTGTAATCTCACATAACCGAGCAAGATCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp TTCCTTTCATGCCTCCATAATTTGGATTCCCATATTTCATGTAATACTGACTTCCCCGGAAGGGTGAGCTaGCCGCTTCCCTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: FLSCLHNLDSHISCNTDFPGRVS*PLPSSS
Trigger: GGAAGAGGAGGGAAGCGGCCAGCTCACCCTTCCGGG...GAAGTCAGTATTACATGAAATATGGGAATCCAAATTATGGAGGCATGAAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574911.5
CDS-3UTR CCA 90 bp GAGGTAGAAACAGCTCTGTGCACAGTCTGTAGGGCTAGTGAGATCAAGATACATAACTATTTACGAACCTaGTCATCCAGAGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: EVETALCTVCRASEIKIHNYLRT*SSREGP
Trigger: GGGGCCCTCTCTGGATGACCAGGTTCGTAAATAGTT...ATGTATCTTGATCTCACTAGCCCTACAGACTGTGCACAGAGCTGTTTCTACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp GACCACGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAAGCACTAGAAGGAAACTaGAGCTCACCCCAGTTGAGC +
Preference number: 4 (lower is better)
Translates to: DHGLLPSLTPMFQQTEEKALEGN*SSPQLS
Trigger: GCTCAACTGGGGTGAGCTCCAGTTTCCTTCTAGTGC...TTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCGTGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp GACCACGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAACCCACAAATGCAGACTaGGATCTCCACATGACCAGG +
Preference number: 4 (lower is better)
Translates to: DHGLLPSLTPMFQQTEEKPTNAD*DLHMTR
Trigger: CCTGGTCATGTGGAGATCCCAGTCTGCATTTGTGGG...TTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCGTGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp CTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAATTGACTTTTCTTGTTGCAAAATGTTCATaGATGGAGGAGACGTGCTCG +
Preference number: 4 (lower is better)
Translates to: LLFPLEGCPISTWELTFLVAKCS*MEETCS
Trigger: CGAGCACGTCTCCTCCATCCATGAACATTTTGCAAC...AAGAAAAGTCAATTCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp TTAGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAAGGCTGTCCCTGTTCTTaGGAAATGTTCACTAAAACA +
Preference number: 4 (lower is better)
Translates to: LAPPQVKIDRIQAALCAQGCPCS*EMFTKT
Trigger: TGTTTTAGTGAACATTTCCCAAGAACAGGGACAGCC...TTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp CTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAATTGACTTTTCTTAAATTCCAGGTCTGGTaGTTTTCCTGCCAGGTCATG +
Preference number: 4 (lower is better)
Translates to: LLFPLEGCPISTWELTFLKFQVW*FSCQVM
Trigger: CATGACCTGGCAGGAAAACCACCAGACCTGGAATTT...AAGAAAAGTCAATTCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp TCTTCTCCCGAGTATCGGCGTAGAGGCCTTTACTATCCTGCCTGGGAACACCTACTAATATTTTTCAACTaGGATTCCACTTCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: SSPEYRRRGLYYPAWEHLLIFFN*DSTSSA
Trigger: TGCTGACGAAGTGGAATCTCAGTTGAAAAATATTAG...TAGGTGTTCCCAGGCAGGATAGTAAAGGCCTCTACGCCGATACTCGGGAGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574911.5
CDS-3UTR TCA 90 bp CGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAACACTGAAAGACGACACCACTTaGGCTTCCCCTTTAGCCAAC +
Preference number: 4 (lower is better)
Translates to: RFITISNAHVPANRRKTLKDDTT*ASPLAN
Trigger: GTTGGCTAAAGGGGAAGCTCAAGTGGTGTCGTCTTT...CAGTGTTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR TCA 90 bp CGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAACACTGAGAGTAAACCGCCACTaGGATGCACCAACAAAGCCA +
Preference number: 4 (lower is better)
Translates to: RFITISNAHVPANRRKTLRVNRH*DAPTKP
Trigger: TGGCTTTGTTGGTGCATCTCAGTGGCGGTTTACTCT...CAGTGTTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp CCAGAACTGGGCTGGGTTACCATAATTCATTCATTTACCAAACACTTTCGAAGCAGCTCACCACAGCCTTaGATTACTGGGCTCATGCGA +
Preference number: 4 (lower is better)
Translates to: PELGWVTIIHSFTKHFRSSSPQP*ITGLMR
Trigger: TCGCATGAGCCCAGTAATTCAAGGCTGTGGTGAGCT...GCTTCGAAAGTGTTTGGTAAATGAATGAATTATGGTAACCCAGCCCAGTTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp GAGGTAGAAACAGCTCTGTGCACAGTCTGTAGGGCTAGTGAGATCAAGATACATACTGACCTTGGTAGGTaGAATACCGCCTATACTCTC +
Preference number: 4 (lower is better)
Translates to: EVETALCTVCRASEIKIHTDLGR*NTAYTL
Trigger: GAGAGTATAGGCGGTATTTCACCTACCAAGGTCAGT...ATGTATCTTGATCTCACTAGCCCTACAGACTGTGCACAGAGCTGTTTCTACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp CTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAATTGACTTTTCTTCTCACTCGAGATTCCTaGGAGAAGACTTTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: LLFPLEGCPISTWELTFLLTRDS*EKTLCL
Trigger: CAAACACAAAGTCTTCTCTCAGGAATCTCGAGTGAG...AAGAAAAGTCAATTCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp CTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAATTGACTTTTCTTTTGGCTAAGGTTCTGTaGAGATCCGATGACATTTCC +
Preference number: 4 (lower is better)
Translates to: LLFPLEGCPISTWELTFLLAKVL*RSDDIS
Trigger: GGAAATGTCATCGGATCTTCACAGAACCTTAGCCAA...AAGAAAAGTCAATTCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp CTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAATTGACTTTTCTTAAGCGCTTGGCTCGCTaGTCTTTCTTTTCAATTGCT +
Preference number: 4 (lower is better)
Translates to: LLFPLEGCPISTWELTFLKRLAR*SFFSIA
Trigger: AGCAATTGAAAAGAAAGAGCAGCGAGCCAAGCGCTT...AAGAAAAGTCAATTCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp CGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAACACTGAGGCCTTTACTATCCTaGCTGGGAACACCTAGCCTA +
Preference number: 4 (lower is better)
Translates to: RFITISNAHVPANRRKTLRPLLS*LGTPSL
Trigger: TAGGCTAGGTGTTCCCAGGCAGGATAGTAAAGGCCT...CAGTGTTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR GCA 90 bp GACCACGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAAAGACCCAGTTTTGACTaGACACCACCTCCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: DHGLLPSLTPMFQQTEEKRPSFD*TPPPSR
Trigger: TCTGGAAGGAGGTGGTGTGCAGTCAAAACTGGGTCT...TTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCGTGGTC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp AATTCATTCATTTACCAAACACTTTCGAAGCACTACTTACTCTGGGCTGGCCTGTTAGGGTCTAGCGCCTaGCTACCAGCTTCCTCTACT +
Preference number: 4 (lower is better)
Translates to: NSFIYQTLSKHYLLWAGLLGSSA*LPASST
Trigger: AGTAGAGGAAGCTGGTAGGCAGGCGCTAGACCCTAA...CAGGCCAGCCCAGAGTAAGTAGTGCTTCGAAAGTGTTTGGTAAATGAATGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp GACCACGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAAAAGACAGCAAGAGGGTaGTCACCATGTTGGCATCCT +
Preference number: 4 (lower is better)
Translates to: DHGLLPSLTPMFQQTEEKKTARG*SPCWHP
Trigger: AGGATGCCAACATGGTGAGCACCCTCTTGCTGTCTT...TTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCGTGGTC
47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp CTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAATTGACTTTTCTTGAAAAAGTGGCCAGGTaGACTTGTAGTCACAGTTAC +
Preference number: 4 (lower is better)
Translates to: LLFPLEGCPISTWELTFLEKVAR*TCSHSY
Trigger: GTAACTGTGACTACAAGTGCACCTGGCCACTTTTTC...AAGAAAAGTCAATTCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp TCAGTTCTAGATCATAGTCCATTTCATCTGAGTCTGAGCTGCTGGCACTGGATCTCTGCATCCATGTCCTaGTCTTCTTCTTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SVLDHSPFHLSLSCWHWISASMS*SSSSSS
Trigger: GGAAGAGGAAGAAGAAGACCAGGACATGGATGCAGA...GATCCAGTGCCAGCAGCTCAGACTCAGATGAAATGGACTATGATCTAGAACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574911.5
CDS-3UTR CCA 90 bp CTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAATTGACTTTTCTTCTTTACTATCCTGCCTaGGAACACCTAGCCTACTAT +
Preference number: 4 (lower is better)
Translates to: LLFPLEGCPISTWELTFLLYYPA*EHLAYY
Trigger: ATAGTAGGCTAGGTGTTCCCAGGCAGGATAGTAAAG...AAGAAAAGTCAATTCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR CCA 90 bp AATTCATTCATTTACCAAACACTTTCGAAGCACTACTTACTCTGGGCTGGCCTGGTGTTGGTGGAGATGTaGAGAAACTGGAACCCTCGC +
Preference number: 4 (lower is better)
Translates to: NSFIYQTLSKHYLLWAGLVLVEM*RNWNPR
Trigger: GCGAGGGTTCCAGTTTCTCCACATCTCCACCAACAC...CAGGCCAGCCCAGAGTAAGTAGTGCTTCGAAAGTGTTTGGTAAATGAATGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp GACCACGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAAAGGCAAAAGAGCCACTaGAGGAATGAGCTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: DHGLLPSLTPMFQQTEEKRQKSH*RNELCS
Trigger: AGAGCAGAGCTCATTCCTCCAGTGGCTCTTTTGCCT...TTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCGTGGTC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp GAGGTAGAAACAGCTCTGTGCACAGTCTGTAGGGCTAGTGAGATCAAGATACATAAGGGTCCAGGGGCTTaGATCTCTTGTTTACAAACC +
Preference number: 4 (lower is better)
Translates to: EVETALCTVCRASEIKIHKGPGA*ISCLQT
Trigger: GGTTTGTAAACAAGAGATCCAAGCCCCTGGACCCTT...ATGTATCTTGATCTCACTAGCCCTACAGACTGTGCACAGAGCTGTTTCTACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp CCAGAACTGGGCTGGGTTACCATAATTCATTCATTTACCAAACACTTTCGAAGCAGTAAGGAGCAGAGCTaGGACTCCAAACAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: PELGWVTIIHSFTKHFRSSKEQS*DSKQAC
Trigger: ACAGGCCTGTTTGGAGTCCCAGCTCTGCTCCTTACT...GCTTCGAAAGTGTTTGGTAAATGAATGAATTATGGTAACCCAGCCCAGTTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp GCCCATGTTCCAGCAAACCGAAGAAAAACACTGTTTCTTAAAACTGCAGAGGAACGTGGACGGGAGTGCTaGCGTTTCTCATCTAATAGA +
Preference number: 4 (lower is better)
Translates to: AHVPANRRKTLFLKTAEERGREC*RFSSNR
Trigger: TCTATTAGATGAGAAACGTCAGCACTCCCGTCCACG...TTCCTCTGCAGTTTTAAGAAACAGTGTTTTTCTTCGGTTTGCTGGAACATGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR TCA 90 bp CGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAACACTGTGGAACAAATGGACCTaGGCTGCTGGTGTAAAACCA +
Preference number: 4 (lower is better)
Translates to: RFITISNAHVPANRRKTLWNKWT*AAGVKP
Trigger: TGGTTTTACACCAGCAGCTCAGGTCCATTTGTTCCA...CAGTGTTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp CTAGATCTTGCTCGGTTATGTGAGATTACAATTCACCGGTTTCCATCCTGTATGGAGGAGACTACATCCTaGGGACGCCACAAATTATCC +
Preference number: 4 (lower is better)
Translates to: LDLARLCEITIHRFPSCMEETTS*GRHKLS
Trigger: GGATAATTTGTGGCGTCCTCAGGATGTAGTCTCCTC...CATACAGGATGGAAACCGGTGAATTGTAATCTCACATAACCGAGCAAGATCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp GACCACGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAACACATGGGCAAGAAATaGCTACATGGGACCTCAAGA +
Preference number: 4 (lower is better)
Translates to: DHGLLPSLTPMFQQTEEKHMGKK*LHGTSR
Trigger: TCTTGAGGTCCCATGTAGTCATTTCTTGCCCATGTG...TTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCGTGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp GCCCATGTTCCAGCAAACCGAAGAAAAACACTGTTTCTTAAAACTGCAGAGGAACTGCTGTCTTCAGAGTaGGTCAAAAGCACTGAGGCA +
Preference number: 4 (lower is better)
Translates to: AHVPANRRKTLFLKTAEELLSSE*VKSTEA
Trigger: TGCCTCAGTGCTTTTGACTCACTCTGAAGACAGCAG...TTCCTCTGCAGTTTTAAGAAACAGTGTTTTTCTTCGGTTTGCTGGAACATGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp CTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAATTGACTTTTCTTAGAGGAGGGAACGAATaGAAGAGAAAATGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: LLFPLEGCPISTWELTFLRGGNE*KRKCGK
Trigger: TTTGCCACATTTTCTCTTTCATTCGTTCCCTCCTCT...AAGAAAAGTCAATTCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp AATTCATTCATTTACCAAACACTTTCGAAGCACTACTTACTCTGGGCTGGCCTGGAAAGACAGAAAGGCTaGGGACCTGCTCCAAACGAA +
Preference number: 4 (lower is better)
Translates to: NSFIYQTLSKHYLLWAGLERQKG*GPAPNE
Trigger: TTCGTTTGGAGCAGGTCCTCAGCCTTTCTGTCTTTC...CAGGCCAGCCCAGAGTAAGTAGTGCTTCGAAAGTGTTTGGTAAATGAATGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp TTTTCTCAAAGGGTAAAGCCTGTGGGGTGGTGGGAAAGGAATCGAGGGCCCAGATTAATAACAGTGTTCTaGATTAATTCGTGCCACAGT +
Preference number: 4 (lower is better)
Translates to: FSQRVKPVGWWERNRGPRLITVF*INSCHS
Trigger: ACTGTGGCACGAATTAATGCAGAACACTGTTATTAA...TCTGGGCCCTCGATTCCTTTCCCACCACCCCACAGGCTTTACCCTTTGAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR GCA 90 bp GACCACGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAACTCCACATGACCAGGTaGTGTGGACTGAACTGTAAA +
Preference number: 4 (lower is better)
Translates to: DHGLLPSLTPMFQQTEEKLHMTR*CGLNCK
Trigger: TTTACAGTTCAGTCCACAGCACCTGGTCATGTGGAG...TTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCGTGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp GACCACGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAAGTCTGGTGGTTTTCCTaGCAGGTCATGATGAAACCA +
Preference number: 4 (lower is better)
Translates to: DHGLLPSLTPMFQQTEEKVWWFS*QVMMKP
Trigger: TGGTTTCATCATGACCTGGCAGGAAAACCACCAGAC...TTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCGTGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp CCAGAACTGGGCTGGGTTACCATAATTCATTCATTTACCAAACACTTTCGAAGCTCTAACACGAGTGTCTaGAGCCCCATTCGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: PELGWVTIIHSFTKHFRSSNTSV*SPIRFE
Trigger: CTCAAAGCGAATGGGGCTGCAGACACTCGTGTTAGA...GCTTCGAAAGTGTTTGGTAAATGAATGAATTATGGTAACCCAGCCCAGTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp CGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAACACTGTCTGCATCCATGTCCTaGTCTTCTTCTTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RFITISNAHVPANRRKTLSASMS*SSSSSS
Trigger: GGAAGAGGAAGAAGAAGACCAGGACATGGATGCAGA...CAGTGTTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR CCA 90 bp CGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAACACTGTCTTTTCTTTGGTCTTaGGTGCAGATCCTAGGCGAG +
Preference number: 4 (lower is better)
Translates to: RFITISNAHVPANRRKTLSFLWS*VQILGE
Trigger: CTCGCCTAGGATCTGCACCCAAGACCAAAGAAAAGA...CAGTGTTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR CCA 90 bp TTAGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACGACTAACTTCAATCTaGAGAGATGGTAAGTTATCT +
Preference number: 4 (lower is better)
Translates to: LAPPQVKIDRIQAALCAQRLTSI*RDGKLS
Trigger: AGATAACTTACCATCTCTCCAGATTGAAGTTAGTCG...TTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR CCA 90 bp CTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAATTGACTTTTCTTCTTGGAAAAACCACCTaGTGGTTCCTGAAAAGGTTA +
Preference number: 4 (lower is better)
Translates to: LLFPLEGCPISTWELTFLLGKTT*WFLKRL
Trigger: TAACCTTTTCAGGAACCACCAGGTGGTTTTTCCAAG...AAGAAAAGTCAATTCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp AATTCATTCATTTACCAAACACTTTCGAAGCACTACTTACTCTGGGCTGGCCTGCCGTCTCAGAAAAAGTaGCCAGGTGCACTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: NSFIYQTLSKHYLLWAGLPSQKK*PGALVV
Trigger: GACTACAAGTGCACCTGGCCACTTTTTCTGAGACGG...CAGGCCAGCCCAGAGTAAGTAGTGCTTCGAAAGTGTTTGGTAAATGAATGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CAA 72 bp GCATCTCACCGTAACTTAATGCTTCGAGTGAGAAGTTaGAGGAATGCTGCTTTAGGCAAAAGAGCCACTGGA +
Preference number: 4 (lower is better)
Translates to: ASHRNLMLRVRS*RNAALGKRATG
Trigger: TCCAGTGGCTCTTTTGCCTAAAGCAGCATTCCTCAAACTTCTCACTCGAAGCATTAAGTTACGGTGAGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp AATTCATTCATTTACCAAACACTTTCGAAGCACTACTTACTCTGGGCTGGCCTGGACTCCTCTTCTACCTaGGACAACGTATCCAACTCT +
Preference number: 4 (lower is better)
Translates to: NSFIYQTLSKHYLLWAGLDSSST*DNVSNS
Trigger: AGAGTTGGATACGTTGTCTCAGGTAGAAGAGGAGTC...CAGGCCAGCCCAGAGTAAGTAGTGCTTCGAAAGTGTTTGGTAAATGAATGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp GAGCTGCTTTCCCGACTAACTTCAATCTGGAGAGATGGTAAGTTATCTAACCGGAAAATTCTTCAACATTaGCCCATAATCCCACCCCAG +
Preference number: 4 (lower is better)
Translates to: ELLSRLTSIWRDGKLSNRKILQH*PIIPPQ
Trigger: CTGGGGTGGGATTATGGGTCAATGTTGAAGAATTTT...CCGGTTAGATAACTTACCATCTCTCCAGATTGAAGTTAGTCGGGAAAGCAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574911.5
CDS-3UTR GCA 90 bp GACCACGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAAAAAAGACATCTTGGGTaGTCATCTCATCTACTCCGC +
Preference number: 4 (lower is better)
Translates to: DHGLLPSLTPMFQQTEEKKRHLG*SSHLLR
Trigger: GCGGAGTAGATGAGATGAGCACCCAAGATGTCTTTT...TTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCGTGGTC
44% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp CCAGAACTGGGCTGGGTTACCATAATTCATTCATTTACCAAACACTTTCGAAGCACACCTAGCCTACTATaGACATCAGAAGAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: PELGWVTIIHSFTKHFRSTPSLL*TSEEGS
Trigger: AGAGCCCTCTTCTGATGTGCATAGTAGGCTAGGTGT...GCTTCGAAAGTGTTTGGTAAATGAATGAATTATGGTAACCCAGCCCAGTTCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp GAGGTAGAAACAGCTCTGTGCACAGTCTGTAGGGCTAGTGAGATCAAGATACATATTCTTAAGATGTCTTaGCGAAGTAGCAAGAGCGGA +
Preference number: 4 (lower is better)
Translates to: EVETALCTVCRASEIKIHILKMS*RSSKSG
Trigger: TCCGCTCTTGCTACTTCGGCAAGACATCTTAAGAAT...ATGTATCTTGATCTCACTAGCCCTACAGACTGTGCACAGAGCTGTTTCTACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp TTGGGTGCAGATCCTAGGCGAGTCCATAAATTACCTGATTTCTTCTCCCGAGTAATTCTTAAGATGTCTTaGCGAAGTAGCAAGAGCGGA +
Preference number: 4 (lower is better)
Translates to: LGADPRRVHKLPDFFSRVILKMS*RSSKSG
Trigger: TCCGCTCTTGCTACTTCGGCAAGACATCTTAAGAAT...TACTCGGGAGAAGAAATCAGGTAATTTATGGACTCGCCTAGGATCTGCACCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574911.5
CDS-3UTR GCA 90 bp GCCCATGTTCCAGCAAACCGAAGAAAAACACTGTTTCTTAAAACTGCAGAGGAACGGAAGCACAGTCAATaGTGCAGCTCTTATCTACCT +
Preference number: 4 (lower is better)
Translates to: AHVPANRRKTLFLKTAEERKHSQ*CSSYLP
Trigger: AGGTAGATAAGAGCTGCAGCATTGACTGTGCTTCCG...TTCCTCTGCAGTTTTAAGAAACAGTGTTTTTCTTCGGTTTGCTGGAACATGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR GCA 90 bp TTGGGTGCAGATCCTAGGCGAGTCCATAAATTACCTGATTTCTTCTCCCGAGTAGCAGCTCTCAAATCTTaGAGCCCTTTACTTCCTTTA +
Preference number: 4 (lower is better)
Translates to: LGADPRRVHKLPDFFSRVAALKS*SPLLPL
Trigger: TAAAGGAAGTAAAGGGCTGCAAGATTTGAGAGCTGC...TACTCGGGAGAAGAAATCAGGTAATTTATGGACTCGCCTAGGATCTGCACCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574911.5
CDS-3UTR GCA 90 bp GCCCATGTTCCAGCAAACCGAAGAAAAACACTGTTTCTTAAAACTGCAGAGGAATGCACACTTCTAGAATaGGGACTCATCCTGCATCCA +
Preference number: 4 (lower is better)
Translates to: AHVPANRRKTLFLKTAEECTLLE*GLILHP
Trigger: TGGATGCAGGATGAGTCCGCATTCTAGAAGTGTGCA...TTCCTCTGCAGTTTTAAGAAACAGTGTTTTTCTTCGGTTTGCTGGAACATGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp GAGGTAGAAACAGCTCTGTGCACAGTCTGTAGGGCTAGTGAGATCAAGATACATTTGCCTTGTCTGCTTTaGTCTGACAAAGTGCTTATG +
Preference number: 4 (lower is better)
Translates to: EVETALCTVCRASEIKIHLPCLL*SDKVLM
Trigger: CATAAGCACTTTGTCAGAGCAAAGCAGACAAGGCAA...ATGTATCTTGATCTCACTAGCCCTACAGACTGTGCACAGAGCTGTTTCTACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp CGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAACACTGCACAGGCTTAAGAACTaGCTCAGCAGTCCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: RFITISNAHVPANRRKTLHRLKN*LSSPSL
Trigger: TAAAGAAGGACTGCTGAGCCAGTTCTTAAGCCTGTG...CAGTGTTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp AATTCATTCATTTACCAAACACTTTCGAAGCACTACTTACTCTGGGCTGGCCTGCTCACTAACCTATATTaGCCCAGAGGTGATGGTGAC +
Preference number: 4 (lower is better)
Translates to: NSFIYQTLSKHYLLWAGLLTNLY*PRGDGD
Trigger: GTCACCATCACCTCTGGGCCAATATAGGTTAGTGAG...CAGGCCAGCCCAGAGTAAGTAGTGCTTCGAAAGTGTTTGGTAAATGAATGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp GCCCATGTTCCAGCAAACCGAAGAAAAACACTGTTTCTTAAAACTGCAGAGGAATCCTGGATTGGATCCTaGACCAGAAAAACAACGGCT +
Preference number: 4 (lower is better)
Translates to: AHVPANRRKTLFLKTAEESWIGS*TRKTTA
Trigger: AGCCGTTGTTTTTCTGGTCCAGGATCCAATCCAGGA...TTCCTCTGCAGTTTTAAGAAACAGTGTTTTTCTTCGGTTTGCTGGAACATGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp GCCCATGTTCCAGCAAACCGAAGAAAAACACTGTTTCTTAAAACTGCAGAGGAAAGCTTCATCATCATCTaGACTGTCTTCCTGCTTGTC +
Preference number: 4 (lower is better)
Translates to: AHVPANRRKTLFLKTAEESFIII*TVFLLV
Trigger: GACAAGCAGGAAGACAGTTCAGATGATGATGAAGCT...TTCCTCTGCAGTTTTAAGAAACAGTGTTTTTCTTCGGTTTGCTGGAACATGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp GACCACGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAACAACTCTACATCACTTaGGTTCTCATCTTCAACCTC +
Preference number: 4 (lower is better)
Translates to: DHGLLPSLTPMFQQTEEKQLYIT*VLIFNL
Trigger: GAGGTTGAAGATGAGAACTCAAGTGATGTAGAGTTG...TTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCGTGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp CGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAACACTGTTTGGACCATCTGCATaGTTCCCTAGCAAATGCTTT +
Preference number: 4 (lower is better)
Translates to: RFITISNAHVPANRRKTLFGPSA*FPSKCF
Trigger: AAAGCATTTGCTAGGGAATCATGCAGATGGTCCAAA...CAGTGTTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp AATTCATTCATTTACCAAACACTTTCGAAGCACTACTTACTCTGGGCTGGCCTGCCGGAATTGCTCAAATaGACAGTAAGAATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: NSFIYQTLSKHYLLWAGLPELLK*TVRILR
Trigger: CCTCAGGATTCTTACTGTTCATTTGAGCAATTCCGG...CAGGCCAGCCCAGAGTAAGTAGTGCTTCGAAAGTGTTTGGTAAATGAATGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp GACCACGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAATCTTGCTCGGTTATGTaGGATTACAATTCACCGGTT +
Preference number: 4 (lower is better)
Translates to: DHGLLPSLTPMFQQTEEKSCSVM*DYNSPV
Trigger: AACCGGTGAATTGTAATCTCACATAACCGAGCAAGA...TTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCGTGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp AATTCATTCATTTACCAAACACTTTCGAAGCACTACTTACTCTGGGCTGGCCTGTTTTGTTTCTCGCATTaGAAGGCTGCTTGGCTAAGG +
Preference number: 4 (lower is better)
Translates to: NSFIYQTLSKHYLLWAGLFCFSH*KAAWLR
Trigger: CCTTAGCCAAGCAGCCTTTCAATGCGAGAAACAAAA...CAGGCCAGCCCAGAGTAAGTAGTGCTTCGAAAGTGTTTGGTAAATGAATGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp CCAGAACTGGGCTGGGTTACCATAATTCATTCATTTACCAAACACTTTCGAAGCACACTTTGCCTTGTCTaGTTTGCTCTGACAAAGTGC +
Preference number: 4 (lower is better)
Translates to: PELGWVTIIHSFTKHFRSTLCLV*FALTKC
Trigger: GCACTTTGTCAGAGCAAAGCAGACAAGGCAAAGTGT...GCTTCGAAAGTGTTTGGTAAATGAATGAATTATGGTAACCCAGCCCAGTTCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp CTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAATTGACTTTTCTTAGTGTGTATTTCTCTTaGTTACATCAAAGACCCAGT +
Preference number: 4 (lower is better)
Translates to: LLFPLEGCPISTWELTFLSVYFS*LHQRPS
Trigger: ACTGGGTCTTTGATGTAACCAAGAGAAATACACACT...AAGAAAAGTCAATTCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp AATTCATTCATTTACCAAACACTTTCGAAGCACTACTTACTCTGGGCTGGCCTGTGTGTTAACCCAGGGTaGACAATGGTGTTGACTTCA +
Preference number: 4 (lower is better)
Translates to: NSFIYQTLSKHYLLWAGLCVNPG*TMVLTS
Trigger: TGAAGTCAACACCATTGTCCACCCTGGGTTAACACA...CAGGCCAGCCCAGAGTAAGTAGTGCTTCGAAAGTGTTTGGTAAATGAATGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp CCAGAACTGGGCTGGGTTACCATAATTCATTCATTTACCAAACACTTTCGAAGCAAAATTCTTCAACATTaGCCCATAATCCCACCCCAG +
Preference number: 4 (lower is better)
Translates to: PELGWVTIIHSFTKHFRSKILQH*PIIPPQ
Trigger: CTGGGGTGGGATTATGGGTCAATGTTGAAGAATTTT...GCTTCGAAAGTGTTTGGTAAATGAATGAATTATGGTAACCCAGCCCAGTTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp GCCCATGTTCCAGCAAACCGAAGAAAAACACTGTTTCTTAAAACTGCAGAGGAAAATCAACTATCAATGTaGCCATTAGCTCCGCCACAA +
Preference number: 4 (lower is better)
Translates to: AHVPANRRKTLFLKTAEENQLSM*PLAPPQ
Trigger: TTGTGGCGGAGCTAATGGTCACATTGATAGTTGATT...TTCCTCTGCAGTTTTAAGAAACAGTGTTTTTCTTCGGTTTGCTGGAACATGGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR GCA 90 bp CTAGATCTTGCTCGGTTATGTGAGATTACAATTCACCGGTTTCCATCCTGTATGGCTCATATTGATAAGTaGTCGTGTGGCTGTCATTTC +
Preference number: 4 (lower is better)
Translates to: LDLARLCEITIHRFPSCMAHIDK*SCGCHF
Trigger: GAAATGACAGCCACACGAGCACTTATCAATATGAGC...CATACAGGATGGAAACCGGTGAATTGTAATCTCACATAACCGAGCAAGATCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp CGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAACACTGTTCTTTTGGCGAGACTaGTCTTTCTCCTTAATCAGA +
Preference number: 4 (lower is better)
Translates to: RFITISNAHVPANRRKTLFFWRD*SFSLIR
Trigger: TCTGATTAAGGAGAAAGAGCAGTCTCGCCAAAAGAA...CAGTGTTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR GCA 90 bp GACCACGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAATTCTTTTGGCGAGACTaGTCTTTCTCCTTAATCAGA +
Preference number: 4 (lower is better)
Translates to: DHGLLPSLTPMFQQTEEKFFWRD*SFSLIR
Trigger: TCTGATTAAGGAGAAAGAGCAGTCTCGCCAAAAGAA...TTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCGTGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR GCA 90 bp CGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAACACTGAGAAGTTCAGTTCTCTaGTCTTTGGATGAACTGTGT +
Preference number: 4 (lower is better)
Translates to: RFITISNAHVPANRRKTLRSSVL*SLDELC
Trigger: ACACAGTTCATCCAAAGAGCAGAGAACTGAACTTCT...CAGTGTTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR GCA 90 bp CGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAACACTGCACCACAAAGAAACTTaGTCATTAGGAGCTTGCTTA +
Preference number: 4 (lower is better)
Translates to: RFITISNAHVPANRRKTLHHKET*SLGACL
Trigger: TAAGCAAGCTCCTAATGAGCAAGTTTCTTTGTGGTG...CAGTGTTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp GACCACGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAATCGTATTCTTTTCTTTaGTCTTGGGTGCAGATCCTA +
Preference number: 4 (lower is better)
Translates to: DHGLLPSLTPMFQQTEEKSYSFL*SWVQIL
Trigger: TAGGATCTGCACCCAAGACCAAAGAAAAGAATACGA...TTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCGTGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR CCA 90 bp GCCCATGTTCCAGCAAACCGAAGAAAAACACTGTTTCTTAAAACTGCAGAGGAAGGAATTGACTTTTCTTaGGAAAAGGGTGCTGGTAAC +
Preference number: 4 (lower is better)
Translates to: AHVPANRRKTLFLKTAEEGIDFS*EKGAGN
Trigger: GTTACCAGCACCCTTTTCCCAAGAAAAGTCAATTCC...TTCCTCTGCAGTTTTAAGAAACAGTGTTTTTCTTCGGTTTGCTGGAACATGGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR CCA 90 bp GAGGTAGAAACAGCTCTGTGCACAGTCTGTAGGGCTAGTGAGATCAAGATACATTACTCTCAAGTTTTATaGATAGTGCAGCCAAATTCC +
Preference number: 4 (lower is better)
Translates to: EVETALCTVCRASEIKIHYSQVL*IVQPNS
Trigger: GGAATTTGGCTGCACTATCCATAAAACTTGAGAGTA...ATGTATCTTGATCTCACTAGCCCTACAGACTGTGCACAGAGCTGTTTCTACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp GAGGTAGAAACAGCTCTGTGCACAGTCTGTAGGGCTAGTGAGATCAAGATACATTTCTACAACAGAAACTaGACTGTACTCTTCACAAAC +
Preference number: 4 (lower is better)
Translates to: EVETALCTVCRASEIKIHFYNRN*TVLFTN
Trigger: GTTTGTGAAGAGTACAGTCCAGTTTCTGTTGTAGAA...ATGTATCTTGATCTCACTAGCCCTACAGACTGTGCACAGAGCTGTTTCTACCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp GACCACGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAAGTTTTTGATATTGCTTaGAGATACACTATCTGCCCT +
Preference number: 4 (lower is better)
Translates to: DHGLLPSLTPMFQQTEEKVFDIA*RYTICP
Trigger: AGGGCAGATAGTGTATCTTCAAGCAATATCAAAAAC...TTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCGTGGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR TCA 90 bp CTAGATCTTGCTCGGTTATGTGAGATTACAATTCACCGGTTTCCATCCTGTATGCAGGGAAAGAAAAGCTaGGAAATCTCAGATGTCTTA +
Preference number: 4 (lower is better)
Translates to: LDLARLCEITIHRFPSCMQGKKS*EISDVL
Trigger: TAAGACATCTGAGATTTCTCAGCTTTTCTTTCCCTG...CATACAGGATGGAAACCGGTGAATTGTAATCTCACATAACCGAGCAAGATCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR GCA 90 bp TTGGGTGCAGATCCTAGGCGAGTCCATAAATTACCTGATTTCTTCTCCCGAGTATTAATAACAGTGTTCTaGATTAATTCGTGCCACAGT +
Preference number: 4 (lower is better)
Translates to: LGADPRRVHKLPDFFSRVLITVF*INSCHS
Trigger: ACTGTGGCACGAATTAATGCAGAACACTGTTATTAA...TACTCGGGAGAAGAAATCAGGTAATTTATGGACTCGCCTAGGATCTGCACCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574911.5
CDS-3UTR GCA 90 bp CTAGATCTTGCTCGGTTATGTGAGATTACAATTCACCGGTTTCCATCCTGTATGGAAAATACCTGTCCCTaGAAAAACTTGTTCGGGAAT +
Preference number: 4 (lower is better)
Translates to: LDLARLCEITIHRFPSCMENTCP*KNLFGN
Trigger: ATTCCCGAACAAGTTTTTGCAGGGACAGGTATTTTC...CATACAGGATGGAAACCGGTGAATTGTAATCTCACATAACCGAGCAAGATCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CCA 90 bp TCAGTTCTAGATCATAGTCCATTTCATCTGAGTCTGAGCTGCTGGCACTGGATCCATGCCTCCATAATTTaGATTCCCATATTTCATGTA +
Preference number: 4 (lower is better)
Translates to: SVLDHSPFHLSLSCWHWIHASII*IPIFHV
Trigger: TACATGAAATATGGGAATCCAAATTATGGAGGCATG...GATCCAGTGCCAGCAGCTCAGACTCAGATGAAATGGACTATGATCTAGAACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574911.5
CDS-3UTR CCA 90 bp CGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAACACTGCTTTTTCCTAACCGCTaGCGTATATCTGATTTAGTA +
Preference number: 4 (lower is better)
Translates to: RFITISNAHVPANRRKTLLFPNR*RISDLV
Trigger: TACTAAATCAGATATACGCCAGCGGTTAGGAAAAAG...CAGTGTTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR CCA 90 bp CCAGAACTGGGCTGGGTTACCATAATTCATTCATTTACCAAACACTTTCGAAGCTCCCTTTTTCGAATCTaGGGCTTTCATCTGGAATTA +
Preference number: 4 (lower is better)
Translates to: PELGWVTIIHSFTKHFRSSLFRI*GFHLEL
Trigger: TAATTCCAGATGAAAGCCCCAGATTCGAAAAAGGGA...GCTTCGAAAGTGTTTGGTAAATGAATGAATTATGGTAACCCAGCCCAGTTCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR TCA 90 bp GCCCATGTTCCAGCAAACCGAAGAAAAACACTGTTTCTTAAAACTGCAGAGGAAGTTTTTGATATTGCTTaGAGATACACTATCTGCCCT +
Preference number: 4 (lower is better)
Translates to: AHVPANRRKTLFLKTAEEVFDIA*RYTICP
Trigger: AGGGCAGATAGTGTATCTTCAAGCAATATCAAAAAC...TTCCTCTGCAGTTTTAAGAAACAGTGTTTTTCTTCGGTTTGCTGGAACATGGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR GCA 90 bp TTCCTTTCATGCCTCCATAATTTGGATTCCCATATTTCATGTAATACTGACTTCACACCTAGCCTACTATaGACATCAGAAGAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: FLSCLHNLDSHISCNTDFTPSLL*TSEEGS
Trigger: AGAGCCCTCTTCTGATGTGCATAGTAGGCTAGGTGT...GAAGTCAGTATTACATGAAATATGGGAATCCAAATTATGGAGGCATGAAAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574911.5
CDS-3UTR GCA 90 bp TTCCTTTCATGCCTCCATAATTTGGATTCCCATATTTCATGTAATACTGACTTCAAGCACAGTCAATGCTaGAGCTCTTATCTACCTGGG +
Preference number: 4 (lower is better)
Translates to: FLSCLHNLDSHISCNTDFKHSQC*SSYLPG
Trigger: CCCAGGTAGATAAGAGCTGCAGCATTGACTGTGCTT...GAAGTCAGTATTACATGAAATATGGGAATCCAAATTATGGAGGCATGAAAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574911.5
CDS-3UTR GCA 90 bp GACCACGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAATTCTGCATTAATTCGTaGCACAGTGTAATCAACTAT +
Preference number: 4 (lower is better)
Translates to: DHGLLPSLTPMFQQTEEKFCINS*HSVINY
Trigger: ATAGTTGATTACACTGTGGCACGAATTAATGCAGAA...TTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCGTGGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
3UTR CAA 72 bp CCCAAGAGTCATGAAAATACCTGTCCCTGCAAAAACTaGTTCGGGAATGTTCGTAGCAACACTATTCATAAT +
Preference number: 4 (lower is better)
Translates to: PKSHENTCPCKN*FGNVRSNTIHN
Trigger: ATTATGAATAGTGTTGCTACGAACATTCCCGAACAAGTTTTTGCAGGGACAGGTATTTTCATGACTCTTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CAA 72 bp GGAATAGGGAGAATTGCTAATGGACTCAGGGTTTCTTaGGGTGATCAAAGTGTTTTAAAATTGATTACGGTG +
Preference number: 4 (lower is better)
Translates to: GIGRIANGLRVS*GDQSVLKLITV
Trigger: CACCGTAATCAATTTTAAAACACTTTGATCACCCAAAGAAACCCTGAGTCCATTAGCAATTCTCCCTATTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CAA 72 bp TCAGGTGGTAATTTGTTACCAATTCGGTTTTTGATATaGCTTGAAGATACACTATCTGCCCTCATGGAGTTC +
Preference number: 4 (lower is better)
Translates to: SGGNLLPIRFLI*LEDTLSALMEF
Trigger: GAACTCCATGAGGGCAGATAGTGTATCTTCAAGCAATATCAAAAACCGAATTGGTAACAAATTACCACCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574911.5
3UTR CAA 72 bp CTCAGGGTTTCTTTGGGTGATCAAAGTGTTTTAAAATaGATTACGGTGCTGGTGCATAACTGTAAATATACT +
Preference number: 4 (lower is better)
Translates to: LRVSLGDQSVLK*ITVLVHNCKYT
Trigger: AGTATATTTACAGTTATGCACCAGCACCGTAATCAATTTTAAAACACTTTGATCACCCAAAGAAACCCTGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
3UTR CAA 72 bp AGATGTCGGACATCTGCAAATTTCTCAGGTGGTAATTaGTTACCAATTCGGTTTTTGATATTGCTTGAAGAT +
Preference number: 4 (lower is better)
Translates to: RCRTSANFSGGN*LPIRFLILLED
Trigger: ATCTTCAAGCAATATCAAAAACCGAATTGGTAACAAATTACCACCTGAGAAATTTGCAGATGTCCGACATCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574911.5
CDS CCA 90 bp AGCGCCGCACAGGCACGATTTCCAGCTCGCCCTCCTCCACCTCCATaGGCTCCGGCTCGCCACGGTCAACACCGGACTCCGCCTCAGGGG +
Preference number: 5 (lower is better)
Translates to: SAAQARFPARPPPPP*APARHGQHRTPPQG
Trigger: CCCCTGAGGCGGAGTCCGGTGTTGACCGTGGCGAGCCGGAGCCCATGGAGGTGGAGGAGGGCGAGCTGGAAATCGTGCCTGTGCGGCGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp TTAGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACGCTCCCGGGGCTGCTaGAGAGCCGGGAGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: LAPPQVKIDRIQAALCAQRSRGC*RAGSSS
Trigger: CGAGGAGCTCCCGGCTCTCAAGCAGCCCCGGGAGCG...TTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR CAA 90 bp GGGGGAGGTTCCTACTGCGCGCCCCACCCTGTGCAAGAATGTCAGGCTTTAGGGCAGGGCCAGGCTCTGTaGAGTAATGCTCCCCATCAC +
Preference number: 5 (lower is better)
Translates to: GGGSYCAPHPVQECQALGQGQAL*SNAPHH
Trigger: GTGATGGGGAGCATTACTCAACAGAGCCTGGCCCTG...CCCTAAAGCCTGACATTCTTGCACAGGGTGGGGCGCGCAGTAGGAACCTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp ATGAGACACACAGGGGTCCGTAAAGCCCACCTGGCGGTAGCTGCTTTCCCCACAGAGCAGAGCCAGGGGTaGGCATCCAGGTGTCCGATT +
Preference number: 5 (lower is better)
Translates to: MRHTGVRKAHLAVAAFPTEQSQG*ASRCPI
Trigger: AATCGGACACCTGGATGCCAACCCCTGGCTCTGCTC...TGTGGGGAAAGCAGCTACCGCCAGGTGGGCTTTACGGACCCCTGTGTGTCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp GGTGAGCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCCACTGCCGTCACAGCTaGGGAAGAGTAAACCGCCAC +
Preference number: 5 (lower is better)
Translates to: GELAASLLFPLEGCPISTHCRHS*GRVNRH
Trigger: GTGGCGGTTTACTCTTCCCAAGCTGTGACGGCAGTG...GGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGCTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp CTAGGGTCCCGGAAGGGTGAGCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGGGACCTCAAGATGTaGGTCTTCAATAGGGCACCT +
Preference number: 5 (lower is better)
Translates to: LGSRKGELAASLLFPLEGWDLKM*VFNRAP
Trigger: AGGTGCCCTATTGAAGACCAACATCTTGAGGTCCCA...TCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGCTCACCCTTCCGGGACCCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp AGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACAGCCGAGACTGCGCCATaGCACTCCAGCCTGGGCGAC +
Preference number: 5 (lower is better)
Translates to: SSATSKDRQDPGCTVCTTAETAP*HSSLGD
Trigger: GTCGCCCAGGCTGGAGTGCAATGGCGCAGTCTCGGC...TGTTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp AGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACATCCGGGATCAGTTCCTaGAGCGAGCGCCGCACAGGC +
Preference number: 5 (lower is better)
Translates to: SSATSKDRQDPGCTVCTTSGISS*SERRTG
Trigger: GCCTGTGCGGCGCTCGCTCAAGGAACTGATCCCGGA...TGTTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp CTAGGGTCCCGGAAGGGTGAGCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGAGTCTCACCTTGGGGATaGCTTTCTTCATCATGTCTC +
Preference number: 5 (lower is better)
Translates to: LGSRKGELAASLLFPLEGVSPWG*LSSSCL
Trigger: GAGACATGATGAAGAAAGCAATCCCCAAGGTGAGAC...TCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGCTCACCCTTCCGGGACCCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp CTAGGGTCCCGGAAGGGTGAGCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGAGCAGCCCCATTCGCTTaGAGATGTGAATGTGTTAAC +
Preference number: 5 (lower is better)
Translates to: LGSRKGELAASLLFPLEGAAPFA*RCECVN
Trigger: GTTAACACATTCACATCTCAAAGCGAATGGGGCTGC...TCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGCTCACCCTTCCGGGACCCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp ATGAGACACACAGGGGTCCGTAAAGCCCACCTGGCGGTAGCTGCTTTCCCCACACTTTTCTCAGCTGACTaGTCCTCACTGGCATCCCTG +
Preference number: 5 (lower is better)
Translates to: MRHTGVRKAHLAVAAFPTLFSAD*SSLASL
Trigger: CAGGGATGCCAGTGAGGACAAGTCAGCTGAGAAAAG...TGTGGGGAAAGCAGCTACCGCCAGGTGGGCTTTACGGACCCCTGTGTGTCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp GCTGCAGCTCTTATCTACCTGGGCGGCACTGGTGCACCTCTGAGGTCAGGTCCGTTCTTTTCTTTGGTCTaGGGTGCAGATCCTAGGCGA +
Preference number: 5 (lower is better)
Translates to: AAALIYLGGTGAPLRSGPFFSLV*GADPRR
Trigger: TCGCCTAGGATCTGCACCCAAGACCAAAGAAAAGAA...CGGACCTGACCTCAGAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR CAA 90 bp CTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAATTGACTTTTCTTCCCCGGAGGTGGAGGTaGCAGTGGGCCGAGATCGTG +
Preference number: 5 (lower is better)
Translates to: LLFPLEGCPISTWELTFLPRRWR*QWAEIV
Trigger: CACGATCTCGGCCCACTGCAACCTCCACCTCCGGGG...AAGAAAAGTCAATTCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp CTAGGGTCCCGGAAGGGTGAGCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGAACACCACAAAGAAACTaGCTCATTAGGAGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: LGSRKGELAASLLFPLEGTPQRN*LIRSLL
Trigger: AAGCAAGCTCCTAATGAGCAAGTTTCTTTGTGGTGT...TCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGCTCACCCTTCCGGGACCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp CTAGGGTCCCGGAAGGGTGAGCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGACTTCGCTTCCATGAATaGCTAAGAATTCCTTTCATG +
Preference number: 5 (lower is better)
Translates to: LGSRKGELAASLLFPLEGLRFHE*LRIPFM
Trigger: CATGAAAGGAATTCTTAGCAATTCATGGAAGCGAAG...TCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGCTCACCCTTCCGGGACCCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR CAA 90 bp AATTCATTCATTTACCAAACACTTTCGAAGCACTACTTACTCTGGGCTGGCCTGCGCTCCCGGGGCTGCTaGAGAGCCGGGAGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: NSFIYQTLSKHYLLWAGLRSRGC*RAGSSS
Trigger: CGAGGAGCTCCCGGCTCTCAAGCAGCCCCGGGAGCG...CAGGCCAGCCCAGAGTAAGTAGTGCTTCGAAAGTGTTTGGTAAATGAATGAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp GAGAGCAGCCCAGTCACTGAGCAGATCCCTGCTAGGGCAGGGCTAGAACCCAGATTCTTTTCTTTGGTCTaGGGTGCAGATCCTAGGCGA +
Preference number: 5 (lower is better)
Translates to: ESSPVTEQIPARAGLEPRFFSLV*GADPRR
Trigger: TCGCCTAGGATCTGCACCCAAGACCAAAGAAAAGAA...TCTGGGTTCTAGCCCTGCCCTAGCAGGGATCTGCTCAGTGACTGGGCTGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp GAGAGCAGCCCAGTCACTGAGCAGATCCCTGCTAGGGCAGGGCTAGAACCCAGAAGGGGCTTGGATCTCTaGTTTACAAACCCCTACTTC +
Preference number: 5 (lower is better)
Translates to: ESSPVTEQIPARAGLEPRRGLDL*FTNPYF
Trigger: GAAGTAGGGGTTTGTAAACAAGAGATCCAAGCCCCT...TCTGGGTTCTAGCCCTGCCCTAGCAGGGATCTGCTCAGTGACTGGGCTGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp TGCTGCACCTGCGGCCTGCCTCAGTTCCCAAGCTCCCCAAAAGTGATCTTCTCGCAAGGGTCCAGGGGCTaGGATCTCTTGTTTACAAAC +
Preference number: 5 (lower is better)
Translates to: CCTCGLPQFPSSPKVIFSQGSRG*DLLFTN
Trigger: GTTTGTAAACAAGAGATCCAAGCCCCTGGACCCTTG...CGAGAAGATCACTTTTGGGGAGCTTGGGAACTGAGGCAGGCCGCAGGTGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS TCA 90 bp ACGTCCCTAGGACTGGGACGAGTAAGTATCCAGGGCCTCCTGACATaGTGCTCTGGAAATGACATGACATCGCTTCTGTGGCACGCCTGT +
Preference number: 5 (lower is better)
Translates to: TSLGLGRVSIQGLLT*CSGNDMTSLLWHAC
Trigger: ACAGGCGTGCCACAGAAGCGATGTCATGTCATTTCCAGAGCATCATGTCAGGAGGCCCTGGATACTTACTCGTCCCAGTCCTAGGGACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575815.5
CDS-3UTR CAA 90 bp GCTGCAGCTCTTATCTACCTGGGCGGCACTGGTGCACCTCTGAGGTCAGGTCCGTCTTTTCTGCCAATTTaGAAGATGTCTTCAGGTGCC +
Preference number: 5 (lower is better)
Translates to: AAALIYLGGTGAPLRSGPSFLPI*KMSSGA
Trigger: GGCACCTGAAGACATCTTCAAAATTGGCAGAAAAGA...CGGACCTGACCTCAGAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR CAA 90 bp GGTGAGCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCAGAAAAACAAATCAGTaGTTTGGGCCATTCCGCTGG +
Preference number: 5 (lower is better)
Translates to: GELAASLLFPLEGCPISTRKTNQ*FGPFRW
Trigger: CCAGCGGAATGGCCCAAACAACTGATTTGTTTTTCT...GGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGCTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp GCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGACCAATGTGGCTCTTCTaGGACATATGGCTTTTAGGA +
Preference number: 5 (lower is better)
Translates to: AGRFPPLPPRRMSNKHLGPMWLF*DIWLLG
Trigger: TCCTAAAAGCCATATGTCCAAGAAGAGCCACATTGG...TCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp GGGGGAGGTTCCTACTGCGCGCCCCACCCTGTGCAAGAATGTCAGGCTTTAGGGATTTTGTTTCTCGCATaGAAAGGCTGCTTGGCTAAG +
Preference number: 5 (lower is better)
Translates to: GGGSYCAPHPVQECQALGILFLA*KGCLAK
Trigger: CTTAGCCAAGCAGCCTTTCAATGCGAGAAACAAAAT...CCCTAAAGCCTGACATTCTTGCACAGGGTGGGGCGCGCAGTAGGAACCTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp GAGAGCAGCCCAGTCACTGAGCAGATCCCTGCTAGGGCAGGGCTAGAACCCAGATTTCCTTTAGCAAGTTaGTTAGCTGGACGAAGATCG +
Preference number: 5 (lower is better)
Translates to: ESSPVTEQIPARAGLEPRFPLAS*LAGRRS
Trigger: CGATCTTCGTCCAGCTAACAAACTTGCTAAAGGAAA...TCTGGGTTCTAGCCCTGCCCTAGCAGGGATCTGCTCAGTGACTGGGCTGCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp GCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGATTTCCTTTAGCAAGTTaGTTAGCTGGACGAAGATCG +
Preference number: 5 (lower is better)
Translates to: AGRFPPLPPRRMSNKHLGFPLAS*LAGRRS
Trigger: CGATCTTCGTCCAGCTAACAAACTTGCTAAAGGAAA...TCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR CAA 90 bp GGGGGAGGTTCCTACTGCGCGCCCCACCCTGTGCAAGAATGTCAGGCTTTAGGGTTTTCATGCTTTTCTTaGGTGAAGGCGTGGAAATCA +
Preference number: 5 (lower is better)
Translates to: GGGSYCAPHPVQECQALGFSCFS*VKAWKS
Trigger: TGATTTCCACGCCTTCACCAAAGAAAAGCATGAAAA...CCCTAAAGCCTGACATTCTTGCACAGGGTGGGGCGCGCAGTAGGAACCTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR CAA 90 bp GGTGAGCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCATAAGCACCTGGGAATaGACTTTTCTTGGGAAAAGG +
Preference number: 5 (lower is better)
Translates to: GELAASLLFPLEGCPISTISTWE*TFLGKR
Trigger: CCTTTTCCCAAGAAAAGTCAATTCCCAGGTGCTTAT...GGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGCTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR CAA 90 bp AATTCATTCATTTACCAAACACTTTCGAAGCACTACTTACTCTGGGCTGGCCTGCATGCGCGCCCTCAGTaGTCTCCCTGGCGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: NSFIYQTLSKHYLLWAGLHARPQ*SPWRLL
Trigger: GAGGAGGCGCCAGGGAGACAACTGAGGGCGCGCATG...CAGGCCAGCCCAGAGTAAGTAGTGCTTCGAAAGTGTTTGGTAAATGAATGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp TTAGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAAGGCAGGGTACTGACCTaGGTAGGTGAAATACCGCCT +
Preference number: 5 (lower is better)
Translates to: LAPPQVKIDRIQAALCAQGRVLT*VGEIPP
Trigger: AGGCGGTATTTCACCTACCAAGGTCAGTACCCTGCC...TTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp GCTGGCCGCTTCCCTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAACACATTTCCTGAATTaGAGAACTGTACCATGGGCA +
Preference number: 5 (lower is better)
Translates to: AGRFPPLPPRRMSNKHLGTHFLN*RTVPWA
Trigger: TGCCCATGGTACAGTTCTCAAATTCAGGAAATGTGT...TCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAGGGAAGCGGCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp GCTGCAGCTCTTATCTACCTGGGCGGCACTGGTGCACCTCTGAGGTCAGGTCCGCAAAGTGTTTTAAAATaGATTACGGTGCTGGTGCAT +
Preference number: 5 (lower is better)
Translates to: AAALIYLGGTGAPLRSGPQSVLK*ITVLVH
Trigger: ATGCACCAGCACCGTAATCAATTTTAAAACACTTTG...CGGACCTGACCTCAGAGGTGCACCAGTGCCGCCCAGGTAGATAAGAGCTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp TTTTCTCAAAGGGTAAAGCCTGTGGGGTGGTGGGAAAGGAATCGAGGGCCCAGACAGCCACCATCCTATTaGACTTTCCCCAACAGGCAT +
Preference number: 5 (lower is better)
Translates to: FSQRVKPVGWWERNRGPRQPPSY*TFPNRH
Trigger: ATGCCTGTTGGGGAAAGTCAAATAGGATGGTGGCTG...TCTGGGCCCTCGATTCCTTTCCCACCACCCCACAGGCTTTACCCTTTGAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp GAGAGCAGCCCAGTCACTGAGCAGATCCCTGCTAGGGCAGGGCTAGAACCCAGATCATGCCTCCATAATTaGGATTCCCATATTTCATGT +
Preference number: 5 (lower is better)
Translates to: ESSPVTEQIPARAGLEPRSCLHN*DSHISC
Trigger: ACATGAAATATGGGAATCCAAATTATGGAGGCATGA...TCTGGGTTCTAGCCCTGCCCTAGCAGGGATCTGCTCAGTGACTGGGCTGCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp AGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACAATCAAAGACCCAGTTTaGACTGCACACCACCTCCTT +
Preference number: 5 (lower is better)
Translates to: SSATSKDRQDPGCTVCTTIKDPV*TAHHLL
Trigger: AAGGAGGTGGTGTGCAGTCAAAACTGGGTCTTTGAT...TGTTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp GACCACGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAAGCCGAGATCGTGCCATaGCACTCCAGCCTGCACAAC +
Preference number: 5 (lower is better)
Translates to: DHGLLPSLTPMFQQTEEKAEIVP*HSSLHN
Trigger: GTTGTGCAGGCTGGAGTGCAATGGCACGATCTCGGC...TTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCGTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp CGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAACACTGAGGGTGCTCACCATGTaGGCATCCTCCGGCCTCAGA +
Preference number: 5 (lower is better)
Translates to: RFITISNAHVPANRRKTLRVLTM*ASSGLR
Trigger: TCTGAGGCCGGAGGATGCCAACATGGTGAGCACCCT...CAGTGTTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp TTAGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAAAAAAGACGACACCACTaGAGCTTCCCCTTTAGCCAA +
Preference number: 5 (lower is better)
Translates to: LAPPQVKIDRIQAALCAQKRRHH*SFPFSQ
Trigger: TTGGCTAAAGGGGAAGCTCAAGTGGTGTCGTCTTTT...TTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCTAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR CAA 90 bp ATGAGACACACAGGGGTCCGTAAAGCCCACCTGGCGGTAGCTGCTTTCCCCACATTTTTCTTTCTCCCCTaGATACCAGGAAGAATAAAG +
Preference number: 5 (lower is better)
Translates to: MRHTGVRKAHLAVAAFPTFFFLP*IPGRIK
Trigger: CTTTATTCTTCCTGGTATCAAGGGGAGAAAGAAAAA...TGTGGGGAAAGCAGCTACCGCCAGGTGGGCTTTACGGACCCCTGTGTGTCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp TCTTCTCCCGAGTATCGGCGTAGAGGCCTTTACTATCCTGCCTGGGAACACCTATTCGTATTCTTTTCTTaGGTCTTGGGTGCAGATCCT +
Preference number: 5 (lower is better)
Translates to: SSPEYRRRGLYYPAWEHLFVFFS*VLGADP
Trigger: AGGATCTGCACCCAAGACCAAAGAAAAGAATACGAA...TAGGTGTTCCCAGGCAGGATAGTAAAGGCCTCTACGCCGATACTCGGGAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574911.5
CDS-3UTR CAA 90 bp CAGGACTCTGCCTCTGAACCAGAGCTGCTTTCCCGACTAACTTCAATCTGGAGATGCAGCTCTCAAATCTaGCAGCCCTTTACTTCCTTT +
Preference number: 5 (lower is better)
Translates to: QDSASEPELLSRLTSIWRCSSQI*QPFTSF
Trigger: AAAGGAAGTAAAGGGCTGCAAGATTTGAGAGCTGCA...TCTCCAGATTGAAGTTAGTCGGGAAAGCAGCTCTGGTTCAGAGGCAGAGTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574911.5
CDS-3UTR CAA 90 bp TTTTCTCAAAGGGTAAAGCCTGTGGGGTGGTGGGAAAGGAATCGAGGGCCCAGAGTGGGGTACAGTGATTaGGCATTATACACACATTTC +
Preference number: 5 (lower is better)
Translates to: FSQRVKPVGWWERNRGPRVGYSD*ALYTHF
Trigger: GAAATGTGTGTATAATGCCAAATCACTGTACCCCAC...TCTGGGCCCTCGATTCCTTTCCCACCACCCCACAGGCTTTACCCTTTGAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp GACCACGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAAACCATCCTACTTCTGTaGAACCTCGTCCCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: DHGLLPSLTPMFQQTEEKTILLL*NLVPGR
Trigger: CCTGCCTGGGACGAGGTTCAACAGAAGTAGGATGGT...TTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCGTGGTC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp TTTTCTCAAAGGGTAAAGCCTGTGGGGTGGTGGGAAAGGAATCGAGGGCCCAGATTTTCAATTGCTTCCTaGGAGGTGACATCAATTCCA +
Preference number: 5 (lower is better)
Translates to: FSQRVKPVGWWERNRGPRFSIAS*EVTSIP
Trigger: TGGAATTGATGTCACCTCCAAGGAAGCAATTGAAAA...TCTGGGCCCTCGATTCCTTTCCCACCACCCCACAGGCTTTACCCTTTGAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp CTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAATTGACTTTTCTTGCTCCAAGTTCCTTTTaGTCATACACTCAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: LLFPLEGCPISTWELTFLAPSSF*SYTQSW
Trigger: CCAGGACTGAGTGTATGACAAAAAGGAACTTGGAGC...AAGAAAAGTCAATTCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574911.5
CDS GCA 90 bp GCTTCTGATCTTATCCTGTGCAGGCAGGGAGCTCATATTGATAAGTaGTCGTGTGGCTGTCATTTCATCCAGCCAAACTACATTACAGGA +
Preference number: 5 (lower is better)
Translates to: ASDLILCRQGAHIDK*SCGCHFIQPNYITG
Trigger: TCCTGTAATGTAGTTTGGCTGGATGAAATGACAGCCACACGAGCACTTATCAATATGAGCTCCCTGCCTGCACAGGATAAGATCAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000575815.5
CDS-3UTR CAA 90 bp TTAGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACTTCGCTTCCATGAATaGCTAAGAATTCCTTTCATG +
Preference number: 5 (lower is better)
Translates to: LAPPQVKIDRIQAALCAQLRFHE*LRIPFM
Trigger: CATGAAAGGAATTCTTAGCAATTCATGGAAGCGAAG...TTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR CAA 90 bp AGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAACATTCTCAGGTGGTAATTaGTTACCAATTCGGTTTTTG +
Preference number: 5 (lower is better)
Translates to: SSATSKDRQDPGCTVCTTFSGGN*LPIRFL
Trigger: CAAAAACCGAATTGGTAACAAATTACCACCTGAGAA...TGTTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR CAA 90 bp CAGGACTCTGCCTCTGAACCAGAGCTGCTTTCCCGACTAACTTCAATCTGGAGAAGACGTCACAGTTTTTaGTTCCTAAAAATCCCACAG +
Preference number: 5 (lower is better)
Translates to: QDSASEPELLSRLTSIWRRRHSF*FLKIPQ
Trigger: CTGTGGGATTTTTAGGAACAAAAAACTGTGACGTCT...TCTCCAGATTGAAGTTAGTCGGGAAAGCAGCTCTGGTTCAGAGGCAGAGTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000574911.5
CDS GCA 90 bp TGGGCAAGATTTACTTCCGATCGAAAATGGAAGCGCTTGGCTCGCTaGTCTTTCTTTTCAATTGCTTCCTTGGAGGTGACATCAATTCCA +
Preference number: 5 (lower is better)
Translates to: WARFTSDRKWKRLAR*SFFSIASLEVTSIP
Trigger: TGGAATTGATGTCACCTCCAAGGAAGCAATTGAAAAGAAAGAGCAGCGAGCCAAGCGCTTCCATTTTCGATCGGAAGTAAATCTTGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp CTAGATCTTGCTCGGTTATGTGAGATTACAATTCACCGGTTTCCATCCTGTATGGTCTCCAGTCTCACCTaGGGGATTGCTTTCTTCATC +
Preference number: 5 (lower is better)
Translates to: LDLARLCEITIHRFPSCMVSSLT*GIAFFI
Trigger: GATGAAGAAAGCAATCCCCAAGGTGAGACTGGAGAC...CATACAGGATGGAAACCGGTGAATTGTAATCTCACATAACCGAGCAAGATCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp GACCACGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAACTCCGCAAATATAGATaGTCTCCAGTCTCACCTTGG +
Preference number: 5 (lower is better)
Translates to: DHGLLPSLTPMFQQTEEKLRKYR*SPVSPW
Trigger: CCAAGGTGAGACTGGAGACAATCTATATTTGCGGAG...TTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCGTGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp TTAGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAAGCTCCAAGTTCCTTTTaGTCATCTTTTGTAGCAAAT +
Preference number: 5 (lower is better)
Translates to: LAPPQVKIDRIQAALCAQAPSSF*SSFVAN
Trigger: ATTTGCTACAAAAGATGACAAAAAGGAACTTGGAGC...TTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp TTAGCTCCGCCACAAGTAAAGATCGACAGGATCCAGGCTGCACTGTGTGCACAATCATGCCTCCATAATTaGGATTCCCATATTTCATGT +
Preference number: 5 (lower is better)
Translates to: LAPPQVKIDRIQAALCAQSCLHN*DSHISC
Trigger: ACATGAAATATGGGAATCCAAATTATGGAGGCATGA...TTGTGCACACAGTGCAGCCTGGATCCTGTCGATCTTTACTTGTGGCGGAGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR CAA 90 bp GAGGTAGAAACAGCTCTGTGCACAGTCTGTAGGGCTAGTGAGATCAAGATACATTGCAGCTCTCAAATCTaGCAGCCCTTTACTTCCTTT +
Preference number: 5 (lower is better)
Translates to: EVETALCTVCRASEIKIHCSSQI*QPFTSF
Trigger: AAAGGAAGTAAAGGGCTGCAAGATTTGAGAGCTGCA...ATGTATCTTGATCTCACTAGCCCTACAGACTGTGCACAGAGCTGTTTCTACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp CCAGAACTGGGCTGGGTTACCATAATTCATTCATTTACCAAACACTTTCGAAGCGCTCAGTCTTTCCAATaGAGTATGTGGGGCAGAAGG +
Preference number: 5 (lower is better)
Translates to: PELGWVTIIHSFTKHFRSAQSFQ*SMWGRR
Trigger: CCTTCTGCCCCACATACTCAATTGGAAAGACTGAGC...GCTTCGAAAGTGTTTGGTAAATGAATGAATTATGGTAACCCAGCCCAGTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS CCA 90 bp TCCAAGGCTACATTTCTTTGGGCAAGATTTACTTCCGATCGAAAATaGAAGCGCTTGGCTCGCTGCTCTTTCTTTTCAATTGCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: SKATFLWARFTSDRK*KRLARCSFFSIASL
Trigger: CAAGGAAGCAATTGAAAAGAAAGAGCAGCGAGCCAAGCGCTTCCATTTTCGATCGGAAGTAAATCTTGCCCAAAGAAATGTAGCCTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp GAGGTAGAAACAGCTCTGTGCACAGTCTGTAGGGCTAGTGAGATCAAGATACATATAGGAAAAGACATCTaGGGTGCTCATCTCATCTAC +
Preference number: 5 (lower is better)
Translates to: EVETALCTVCRASEIKIHIGKDI*GAHLIY
Trigger: GTAGATGAGATGAGCACCCAAGATGTCTTTTCCTAT...ATGTATCTTGATCTCACTAGCCCTACAGACTGTGCACAGAGCTGTTTCTACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp CCAGAACTGGGCTGGGTTACCATAATTCATTCATTTACCAAACACTTTCGAAGCAAAAGACGACACCACTaGAGCTTCCCCTTTAGCCAA +
Preference number: 5 (lower is better)
Translates to: PELGWVTIIHSFTKHFRSKRRHH*SFPFSQ
Trigger: TTGGCTAAAGGGGAAGCTCAAGTGGTGTCGTCTTTT...GCTTCGAAAGTGTTTGGTAAATGAATGAATTATGGTAACCCAGCCCAGTTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp GAGGTAGAAACAGCTCTGTGCACAGTCTGTAGGGCTAGTGAGATCAAGATACATTCTTTTCTGCCAATTTaGAAGATGTCTTCAGGTGCC +
Preference number: 5 (lower is better)
Translates to: EVETALCTVCRASEIKIHSFLPI*KMSSGA
Trigger: GGCACCTGAAGACATCTTCAAAATTGGCAGAAAAGA...ATGTATCTTGATCTCACTAGCCCTACAGACTGTGCACAGAGCTGTTTCTACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp AATTCATTCATTTACCAAACACTTTCGAAGCACTACTTACTCTGGGCTGGCCTGCTTCGAGTGAGAAGTTaGAGGAATGCTGCTTTAGGC +
Preference number: 5 (lower is better)
Translates to: NSFIYQTLSKHYLLWAGLLRVRS*RNAALG
Trigger: GCCTAAAGCAGCATTCCTCAAACTTCTCACTCGAAG...CAGGCCAGCCCAGAGTAAGTAGTGCTTCGAAAGTGTTTGGTAAATGAATGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp CCAGAACTGGGCTGGGTTACCATAATTCATTCATTTACCAAACACTTTCGAAGCCATAATCCAGCAAGATaGGTGGCCTTACAAGAGCCA +
Preference number: 5 (lower is better)
Translates to: PELGWVTIIHSFTKHFRSHNPAR*VALQEP
Trigger: TGGCTCTTGTAAGGCCACCAATCTTGCTGGATTATG...GCTTCGAAAGTGTTTGGTAAATGAATGAATTATGGTAACCCAGCCCAGTTCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp CTAGATCTTGCTCGGTTATGTGAGATTACAATTCACCGGTTTCCATCCTGTATGGAGAAGACTTTGTGTTaGGAGTGTGAACGTCAGGGT +
Preference number: 5 (lower is better)
Translates to: LDLARLCEITIHRFPSCMEKTLC*ECERQG
Trigger: ACCCTGACGTTCACACTCCAAACACAAAGTCTTCTC...CATACAGGATGGAAACCGGTGAATTGTAATCTCACATAACCGAGCAAGATCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp CGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAACACTGCCAACTCTACATCACTaGAGTTCTCATCTTCAACCT +
Preference number: 5 (lower is better)
Translates to: RFITISNAHVPANRRKTLPTLHH*SSHLQP
Trigger: AGGTTGAAGATGAGAACTCAAGTGATGTAGAGTTGG...CAGTGTTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp CTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAATTGACTTTTCTTTTCTCAGGTGGTAATTaGTTACCAATTCGGTTTTTG +
Preference number: 5 (lower is better)
Translates to: LLFPLEGCPISTWELTFLFSGGN*LPIRFL
Trigger: CAAAAACCGAATTGGTAACAAATTACCACCTGAGAA...AAGAAAAGTCAATTCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR CAA 90 bp AATTCATTCATTTACCAAACACTTTCGAAGCACTACTTACTCTGGGCTGGCCTGGGCAATAGTGAAGCTTaGGAAAACGTTCAAGCAGAG +
Preference number: 5 (lower is better)
Translates to: NSFIYQTLSKHYLLWAGLGNSEA*ENVQAE
Trigger: CTCTGCTTGAACGTTTTCCAAAGCTTCACTATTGCC...CAGGCCAGCCCAGAGTAAGTAGTGCTTCGAAAGTGTTTGGTAAATGAATGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp CTCCTCTTCCCCCTCGAAGGATGTCCAATAAGCACCTGGGAATTGACTTTTCTTTCATTATTGGGACAGTaGGCAAATTTGAAACAGGAA +
Preference number: 5 (lower is better)
Translates to: LLFPLEGCPISTWELTFLSLLGQ*ANLKQE
Trigger: TTCCTGTTTCAAATTTGCCAACTGTCCCAATAATGA...AAGAAAAGTCAATTCCCAGGTGCTTATTGGACATCCTTCGAGGGGGAAGAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp CCAGAACTGGGCTGGGTTACCATAATTCATTCATTTACCAAACACTTTCGAAGCGACATTTCCAACACTTaGCCTTGTCTGCTTTGCTCT +
Preference number: 5 (lower is better)
Translates to: PELGWVTIIHSFTKHFRSDISNT*PCLLCS
Trigger: AGAGCAAAGCAGACAAGGCAAAGTGTTGGAAATGTC...GCTTCGAAAGTGTTTGGTAAATGAATGAATTATGGTAACCCAGCCCAGTTCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp AATTCATTCATTTACCAAACACTTTCGAAGCACTACTTACTCTGGGCTGGCCTGCAAGGCTACATTTCTTaGGGCAAGATTTACTTCCGA +
Preference number: 5 (lower is better)
Translates to: NSFIYQTLSKHYLLWAGLQGYIS*GKIYFR
Trigger: TCGGAAGTAAATCTTGCCCAAAGAAATGTAGCCTTG...CAGGCCAGCCCAGAGTAAGTAGTGCTTCGAAAGTGTTTGGTAAATGAATGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp AATTCATTCATTTACCAAACACTTTCGAAGCACTACTTACTCTGGGCTGGCCTGTTCGTATTCTTTTCTTaGGTCTTGGGTGCAGATCCT +
Preference number: 5 (lower is better)
Translates to: NSFIYQTLSKHYLLWAGLFVFFS*VLGADP
Trigger: AGGATCTGCACCCAAGACCAAAGAAAAGAATACGAA...CAGGCCAGCCCAGAGTAAGTAGTGCTTCGAAAGTGTTTGGTAAATGAATGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp GACCACGGTTTATTACCATCTCTAACGCCCATGTTCCAGCAAACCGAAGAAAAAAAAAATTCTTCAACATaGACCCATAATCCCACCCCA +
Preference number: 5 (lower is better)
Translates to: DHGLLPSLTPMFQQTEEKKNSST*THNPTP
Trigger: TGGGGTGGGATTATGGGTCAATGTTGAAGAATTTTT...TTTTTCTTCGGTTTGCTGGAACATGGGCGTTAGAGATGGTAATAAACCGTGGTC
42% GC, longest homopolymer 10 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000574911.5
CDS-3UTR CAA 90 bp AATTCATTCATTTACCAAACACTTTCGAAGCACTACTTACTCTGGGCTGGCCTGGAGTGTGTATTTCTCTaGGTTACATCAAAGACCCAG +
Preference number: 5 (lower is better)
Translates to: NSFIYQTLSKHYLLWAGLECVFL*VTSKTQ
Trigger: CTGGGTCTTTGATGTAACCAAGAGAAATACACACTC...CAGGCCAGCCCAGAGTAAGTAGTGCTTCGAAAGTGTTTGGTAAATGAATGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS TCA 90 bp TTAGCTGGACGAAGATCGTTTCTTAACAAAGACTCCTCTTCTACCTaGGACAACGTATCCAACTCTACATCACTTGAGTTCTCATCTTCA +
Preference number: 5 (lower is better)
Translates to: LAGRRSFLNKDSSST*DNVSNSTSLEFSSS
Trigger: TGAAGATGAGAACTCAAGTGATGTAGAGTTGGATACGTTGTCTCAGGTAGAAGAGGAGTCTTTGTTAAGAAACGATCTTCGTCCAGCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389005.6
ENST00000575815.5
ENST00000577169.1
CDS-3UTR CAA 90 bp CCAGAACTGGGCTGGGTTACCATAATTCATTCATTTACCAAACACTTTCGAAGCTTTTCATGCTTTTCTTaGGTGAAGGCGTGGAAATCA +
Preference number: 5 (lower is better)
Translates to: PELGWVTIIHSFTKHFRSFSCFS*VKAWKS
Trigger: TGATTTCCACGCCTTCACCAAAGAAAAGCATGAAAA...GCTTCGAAAGTGTTTGGTAAATGAATGAATTATGGTAACCCAGCCCAGTTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp CCAGAACTGGGCTGGGTTACCATAATTCATTCATTTACCAAACACTTTCGAAGCAGACGTCACAGTTTTTaGTTCCTAAAAATCCCACAG +
Preference number: 5 (lower is better)
Translates to: PELGWVTIIHSFTKHFRSRRHSF*FLKIPQ
Trigger: CTGTGGGATTTTTAGGAACAAAAAACTGTGACGTCT...GCTTCGAAAGTGTTTGGTAAATGAATGAATTATGGTAACCCAGCCCAGTTCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp CTAGATCTTGCTCGGTTATGTGAGATTACAATTCACCGGTTTCCATCCTGTATGGCAAAATGTTCTTTGTaGTACCCTTCAAACTGCTGT +
Preference number: 5 (lower is better)
Translates to: LDLARLCEITIHRFPSCMAKCSL*YPSNCC
Trigger: ACAGCAGTTTGAAGGGTACAACAAAGAACATTTTGC...CATACAGGATGGAAACCGGTGAATTGTAATCTCACATAACCGAGCAAGATCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS-3UTR CAA 90 bp GCCCATGTTCCAGCAAACCGAAGAAAAACACTGTTTCTTAAAACTGCAGAGGAAGGGTGGACAATGGTGTaGACTTCATTACTAGATAAA +
Preference number: 5 (lower is better)
Translates to: AHVPANRRKTLFLKTAEEGWTMV*TSLLDK
Trigger: TTTATCTAGTAATGAAGTCAACACCATTGTCCACCC...TTCCTCTGCAGTTTTAAGAAACAGTGTTTTTCTTCGGTTTGCTGGAACATGGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS CCA 90 bp CCAAACTACATTACAGGAGGTATCATCCAACCATTCGATGTGAGCTaGAGGATATTCTTTAAAATAGGAAAAGACATCTTGGGTGCTCAT +
Preference number: 5 (lower is better)
Translates to: PNYITGGIIQPFDVS*RIFFKIGKDILGAH
Trigger: ATGAGCACCCAAGATGTCTTTTCCTATTTTAAAGAATATCCTCCAGCTCACATCGAATGGTTGGATGATACCTCCTGTAATGTAGTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS TCA 90 bp TGCTCTGACAAAGTGCTTATGACTACTAGATCTTGCTCGGTTATGTaGGATTACAATTCACCGGTTTCCATCTTTAAACAAATATTCCGG +
Preference number: 5 (lower is better)
Translates to: CSDKVLMTTRSCSVM*DYNSPVSIFKQIFR
Trigger: CCGGAATATTTGTTTAAAGATGGAAACCGGTGAATTGTAATCTCACATAACCGAGCAAGATCTAGTAGTCATAAGCACTTTGTCAGAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572988.1
CDS CCA 90 bp GTCACCATGTGTAAACAATCTTATGAGAAGGGAATTAGAACCGAATaGTACACTGGCAATGTTCAGGAGGACGTTGCTGTAATAAATAAA +
Preference number: 5 (lower is better)
Translates to: VTMCKQSYEKGIRTE*YTGNVQEDVAVINK
Trigger: TTTATTTATTACAGCAACGTCCTCCTGAACATTGCCAGTGTACCATTCGGTTCTAATTCCCTTCTCATAAGATTGTTTACACATGGTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575815.5
CDS CCA 72 bp CAGGCACGATTTCCAGCTCGCCCTCCTCCACCTCCATaGGCTCCGGCTCGCCACGGTCAACACCGGACTCCG +
Preference number: 6 (lower is better)
Translates to: QARFPARPPPPP*APARHGQHRTP
Trigger: CGGAGTCCGGTGTTGACCGTGGCGAGCCGGAGCCCATGGAGGTGGAGGAGGGCGAGCTGGAAATCGTGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS TCA 72 bp TTTCATATCTTCTGCTCGTGTCCGGGATCAGTTCCTTaGGCGAGCGCCGCACAGGCACGATTTCCAGCTCGC +
Preference number: 6 (lower is better)
Translates to: FHIFCSCPGSVP*ASAAQARFPAR
Trigger: GCGAGCTGGAAATCGTGCCTGTGCGGCGCTCGCTCAAGGAACTGATCCCGGACACGAGCAGAAGATATGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS CAA 72 bp TTTTCATATCTTCTGCTCGTGTCCGGGATCAGTTCCTaGAGCGAGCGCCGCACAGGCACGATTTCCAGCTCG +
Preference number: 6 (lower is better)
Translates to: FSYLLLVSGISS*SERRTGTISSS
Trigger: CGAGCTGGAAATCGTGCCTGTGCGGCGCTCGCTCAAGGAACTGATCCCGGACACGAGCAGAAGATATGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS TCA 72 bp GGACTGGGACGAGTAAGTATCCAGGGCCTCCTGACATaGTGCTCTGGAAATGACATGACATCGCTTCTGTGG +
Preference number: 6 (lower is better)
Translates to: GLGRVSIQGLLT*CSGNDMTSLLW
Trigger: CCACAGAAGCGATGTCATGTCATTTCCAGAGCATCATGTCAGGAGGCCCTGGATACTTACTCGTCCCAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575815.5
CDS TCA 72 bp AAGTATCCAGGGCCTCCTGACATGATGCTCTGGAAATaGCATGACATCGCTTCTGTGGCACGCCTGTCTCAA +
Preference number: 6 (lower is better)
Translates to: KYPGPPDMMLWK*HDIASVARLSQ
Trigger: TTGAGACAGGCGTGCCACAGAAGCGATGTCATGTCATTTCCAGAGCATCATGTCAGGAGGCCCTGGATACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575815.5
CDS CCA 72 bp ACCCCTCAAACCATGCCCACCAGCTCCTTGGAGAAATaGCTGATTCCAGATGTGGAGCAGGTAAGATGCAAA +
Preference number: 6 (lower is better)
Translates to: TPQTMPTSSLEK*LIPDVEQVRCK
Trigger: TTTGCATCTTACCTGCTCCACATCTGGAATCAGCCATTTCTCCAAGGAGCTGGTGGGCATGGTTTGAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577169.1
CDS CAA 90 bp GCTTCCTTGGAGGTGACATCAATTCCAGTGATGAAGCTGCCAGCCTaGTTTTCATATCTTCTGCTCGTGTCCGGGATCAGTTCCTTGAGC +
Preference number: 6 (lower is better)
Translates to: ASLEVTSIPVMKLPA*FSYLLLVSGISSLS
Trigger: GCTCAAGGAACTGATCCCGGACACGAGCAGAAGATATGAAAACAAGGCTGGCAGCTTCATCACTGGAATTGATGTCACCTCCAAGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS CAA 90 bp GCATCCCTGCTTCTGATCTTATCCTGTGCAGGCAGGGAGCTCATATaGATAAGTGCTCGTGTGGCTGTCATTTCATCCAGCCAAACTACA +
Preference number: 6 (lower is better)
Translates to: ASLLLILSCAGRELI*ISARVAVISSSQTT
Trigger: TGTAGTTTGGCTGGATGAAATGACAGCCACACGAGCACTTATCAATATGAGCTCCCTGCCTGCACAGGATAAGATCAGAAGCAGGGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000575815.5
CDS GCA 72 bp CTTATCCTGTGCAGGCAGGGAGCTCATATTGATAAGTaGTCGTGTGGCTGTCATTTCATCCAGCCAAACTAC +
Preference number: 6 (lower is better)
Translates to: LILCRQGAHIDK*SCGCHFIQPNY
Trigger: GTAGTTTGGCTGGATGAAATGACAGCCACACGAGCACTTATCAATATGAGCTCCCTGCCTGCACAGGATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389005.6
ENST00000575815.5
CDS CAA 72 bp GAGGTGACATCAATTCCAGTGATGAAGCTGCCAGCCTaGTTTTCATATCTTCTGCTCGTGTCCGGGATCAGT +
Preference number: 6 (lower is better)
Translates to: EVTSIPVMKLPA*FSYLLLVSGIS
Trigger: ACTGATCCCGGACACGAGCAGAAGATATGAAAACAAGGCTGGCAGCTTCATCACTGGAATTGATGTCACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS GCA 72 bp GACATGACATCGCTTCTGTGGCACGCCTGTCTCAAATaGACAACCCAAATTCAATCAGGAGGAATCATCAGA +
Preference number: 6 (lower is better)
Translates to: DMTSLLWHACLK*TTQIQSGGIIR
Trigger: TCTGATGATTCCTCCTGATTGAATTTGGGTTGTGCATTTGAGACAGGCGTGCCACAGAAGCGATGTCATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575815.5
CDS CCA 72 bp GGGCAAGATTTACTTCCGATCGAAAATGGAAGCGCTTaGCTCGCTGCTCTTTCTTTTCAATTGCTTCCTTGG +
Preference number: 6 (lower is better)
Translates to: GQDLLPIENGSA*LAALSFQLLPW
Trigger: CCAAGGAAGCAATTGAAAAGAAAGAGCAGCGAGCCAAGCGCTTCCATTTTCGATCGGAAGTAAATCTTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS CCA 72 bp AAGGAAACATTACATACTTACACACTCAGTCCTGGATaGATCCTAGACCTGGGGCTGGGCGGGGAATATATA +
Preference number: 6 (lower is better)
Translates to: KETLHTYTLSPG*ILDLGLGGEYI
Trigger: TATATATTCCCCGCCCAGCCCCAGGTCTAGGATCCATCCAGGACTGAGTGTGTAAGTATGTAATGTTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575815.5
CDS GCA 72 bp TTTACTTCCGATCGAAAATGGAAGCGCTTGGCTCGCTaGTCTTTCTTTTCAATTGCTTCCTTGGAGGTGACA +
Preference number: 6 (lower is better)
Translates to: FTSDRKWKRLAR*SFFSIASLEVT
Trigger: TGTCACCTCCAAGGAAGCAATTGAAAAGAAAGAGCAGCGAGCCAAGCGCTTCCATTTTCGATCGGAAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS GCA 72 bp TACCAACATTCACACTCTGAGTGCCCACTACAGCAATaGAGTGTAGAGGGGATAAAGCAAAATACAGAGACG +
Preference number: 6 (lower is better)
Translates to: YQHSHSECPLQQ*SVEGIKQNTET
Trigger: CGTCTCTGTATTTTGCTTTATCCCCTCTACACTGCATTGCTGTAGTGGGCACTCAGAGTGTGAATGTTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574379.2
CDS GCA 72 bp GAGAAATGGCTGATTCCAGATGTGGAGCAGGTAAGATaGAAAATGAGTACACTCAGTCCTGGATGGATCCTA +
Preference number: 6 (lower is better)
Translates to: EKWLIPDVEQVR*KMSTLSPGWIL
Trigger: TAGGATCCATCCAGGACTGAGTGTACTCATTTTGCATCTTACCTGCTCCACATCTGGAATCAGCCATTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577169.1
CDS CAA 72 bp CTTGGGTGCTCATCTCATCTACTCCGCAAATATAGATaGTCTCCAGTCTCACCTTGGGGATTGCTTTCTTCA +
Preference number: 6 (lower is better)
Translates to: LGCSSHLLRKYR*SPVSPWGLLSS
Trigger: TGAAGAAAGCAATCCCCAAGGTGAGACTGGAGACAATCTATATTTGCGGAGTAGATGAGATGAGCACCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS CAA 90 bp AAAAGACATCTTGGGTGCTCATCTCATCTACTCCGCAAATATAGATaGTCTCCAGTCTCACCTTGGGGATTGCTTTCTTCATCATGTCTC +
Preference number: 6 (lower is better)
Translates to: KRHLGCSSHLLRKYR*SPVSPWGLLSSSCL
Trigger: GAGACATGATGAAGAAAGCAATCCCCAAGGTGAGACTGGAGACAATCTATATTTGCGGAGTAGATGAGATGAGCACCCAAGATGTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS TCA 72 bp TTCTACCTGAGACAACGTATCCAACTCTACATCACTTaGGTTCTCATCTTCAACCTCTCCTTCTTCAGCTTC +
Preference number: 6 (lower is better)
Translates to: FYLRQRIQLYIT*VLIFNLSFFSF
Trigger: GAAGCTGAAGAAGGAGAGGTTGAAGATGAGAACTCAAGTGATGTAGAGTTGGATACGTTGTCTCAGGTAGAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389005.6
ENST00000575815.5
ENST00000577169.1
CDS GCA 72 bp AAAGTAAAAATCCACTACCAACATTCACACTCTGAGTaGCCACTACAGCAATGCAGTGTAGAGGGGATAAAG +
Preference number: 6 (lower is better)
Translates to: KVKIHYQHSHSE*PLQQCSVEGIK
Trigger: CTTTATCCCCTCTACACTGCATTGCTGTAGTGGGCACTCAGAGTGTGAATGTTGGTAGTGGATTTTTACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574379.2
CDS CAA 72 bp TTTCTTCATCATGTCTCGGTCCAAGGCTACATTTCTTaGGGCAAGATTTACTTCCGATCGAAAATGGAAGCG +
Preference number: 6 (lower is better)
Translates to: FLHHVSVQGYIS*GKIYFRSKMEA
Trigger: CGCTTCCATTTTCGATCGGAAGTAAATCTTGCCCAAAGAAATGTAGCCTTGGACCGAGACATGATGAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS CAA 72 bp CTTCTACCTGAGACAACGTATCCAACTCTACATCACTaGAGTTCTCATCTTCAACCTCTCCTTCTTCAGCTT +
Preference number: 6 (lower is better)
Translates to: LLPETTYPTLHH*SSHLQPLLLQL
Trigger: AAGCTGAAGAAGGAGAGGTTGAAGATGAGAACTCAAGTGATGTAGAGTTGGATACGTTGTCTCAGGTAGAAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389005.6
ENST00000575815.5
ENST00000577169.1
CDS CAA 90 bp AAGACTCCTCTTCTACCTGAGACAACGTATCCAACTCTACATCACTaGAGTTCTCATCTTCAACCTCTCCTTCTTCAGCTTCATCATCAT +
Preference number: 6 (lower is better)
Translates to: KTPLLPETTYPTLHH*SSHLQPLLLQLHHH
Trigger: ATGATGATGAAGCTGAAGAAGGAGAGGTTGAAGATGAGAACTCAAGTGATGTAGAGTTGGATACGTTGTCTCAGGTAGAAGAGGAGTCTT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389005.6
ENST00000575815.5
ENST00000577169.1
CDS CCA 72 bp ACATTTCTTTGGGCAAGATTTACTTCCGATCGAAAATaGAAGCGCTTGGCTCGCTGCTCTTTCTTTTCAATT +
Preference number: 6 (lower is better)
Translates to: TFLWARFTSDRK*KRLARCSFFSI
Trigger: AATTGAAAAGAAAGAGCAGCGAGCCAAGCGCTTCCATTTTCGATCGGAAGTAAATCTTGCCCAAAGAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS CAA 90 bp TTCGATGTGAGCTGGAGGATATTCTTTAAAATAGGAAAAGACATCTaGGGTGCTCATCTCATCTACTCCGCAAATATAGATTGTCTCCAG +
Preference number: 6 (lower is better)
Translates to: FDVSWRIFFKIGKDI*GAHLIYSANIDCLQ
Trigger: CTGGAGACAATCTATATTTGCGGAGTAGATGAGATGAGCACCCAAGATGTCTTTTCCTATTTTAAAGAATATCCTCCAGCTCACATCGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS CAA 90 bp CCTTTTGTAGCAAATCTCATGAATAACCTATTTCCTTTAGCAAGTTaGTTAGCTGGACGAAGATCGTTTCTTAACAAAGACTCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: PFVANLMNNLFPLAS*LAGRRSFLNKDSSS
Trigger: AGAAGAGGAGTCTTTGTTAAGAAACGATCTTCGTCCAGCTAACAAACTTGCTAAAGGAAATAGGTTATTCATGAGATTTGCTACAAAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575815.5
CDS CAA 90 bp GCTTTTGTAGCAAATCTCATGAATAACCTATTTCCTTTAGCAAGTTaGTTAGCTGGACGAAGATCGTTTCTTAACAAAGACTCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: AFVANLMNNLFPLAS*LAGRRSFLNKDSSS
Trigger: AGAAGAGGAGTCTTTGTTAAGAAACGATCTTCGTCCAGCTAACAAACTTGCTAAAGGAAATAGGTTATTCATGAGATTTGCTACAAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577169.1
CDS CAA 90 bp TCTTTTGTAGCAAATCTCATGAATAACCTATTTCCTTTAGCAAGTTaGTTAGCTGGACGAAGATCGTTTCTTAACAAAGACTCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: SFVANLMNNLFPLAS*LAGRRSFLNKDSSS
Trigger: AGAAGAGGAGTCTTTGTTAAGAAACGATCTTCGTCCAGCTAACAAACTTGCTAAAGGAAATAGGTTATTCATGAGATTTGCTACAAAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389005.6
CDS TCA 72 bp AAAGTGCTTATGACTACTAGATCTTGCTCGGTTATGTaGGATTACAATTCACCGGTTTCCATCTTTAAACAA +
Preference number: 6 (lower is better)
Translates to: KVLMTTRSCSVM*DYNSPVSIFKQ
Trigger: TTGTTTAAAGATGGAAACCGGTGAATTGTAATCTCACATAACCGAGCAAGATCTAGTAGTCATAAGCACTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572988.1
CDS CAA 72 bp GCAAATCTCATGAATAACCTATTTCCTTTAGCAAGTTaGTTAGCTGGACGAAGATCGTTTCTTAACAAAGAC +
Preference number: 6 (lower is better)
Translates to: ANLMNNLFPLAS*LAGRRSFLNKD
Trigger: GTCTTTGTTAAGAAACGATCTTCGTCCAGCTAACAAACTTGCTAAAGGAAATAGGTTATTCATGAGATTTGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389005.6
ENST00000574911.5
ENST00000575815.5
ENST00000577169.1