Pregenerated sensors for NCBP2L (Homo sapiens)
Ensembl gene IDs: ENSG00000170935Ensembl transcript IDs: ENST00000509000.3, ENST00000639756.1
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTAAGCCAAGCCATTGTAACTCAGGAACCCTCTGTAAAGTGTTGTaGACTATATTGAGAGGATGGAGAGTAGAGAAGTGCAAATGGGGG | + |
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Preference number: 1 (lower is better) Translates to: CKPSHCNSGTLCKVL*TILRGWRVEKCKWG Trigger: CCCCCATTTGCACTTCTCTACTCTCCATCCTCTCAATATAGTTCACAACACTTTACAGAGGGTTCCTGAGTTACAATGGCTTGGCTTACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| 3UTR-3UTR TCA 90 bp | GTTGTATGGGTACCTGAAGCATGGTTTCTACTGAATGCACATCACTTTTATACCGGCTATTTGCAGACTTaGGGTTGGTCTATAACACAC | + |
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Preference number: 2 (lower is better) Translates to: VVWVPEAWFLLNAHHFYTGYLQT*GWSITH Trigger: GTGTGTTATAGACCAACCTCAAGTCTGCAAATAGCC...GGTATAAAAGTGATGTGCATTCAGTAGAAACCATGCTTCAGGTACCCATACAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| 3UTR-3UTR TCA 90 bp | AATTATAATTTTGGGCTGCAGGAACATGGCCATAGAATCCAACAGAAATCTTCTGGCTATTTGCAGACTTaGGGTTGGTCTATAACACAC | + |
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Preference number: 2 (lower is better) Translates to: NYNFGLQEHGHRIQQKSSGYLQT*GWSITH Trigger: GTGTGTTATAGACCAACCTCAAGTCTGCAAATAGCC...AGAAGATTTCTGTTGGATTCTATGGCCATGTTCCTGCAGCCCAAAATTATAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| 3UTR-3UTR TCA 90 bp | GTTGTATGGGTACCTGAAGCATGGTTTCTACTGAATGCACATCACTTTTATACCCTCTGTAAAGTGTTGTaGACTATATTGAGAGGATGG | + |
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Preference number: 2 (lower is better) Translates to: VVWVPEAWFLLNAHHFYTLCKVL*TILRGW Trigger: CCATCCTCTCAATATAGTTCACAACACTTTACAGAG...GGTATAAAAGTGATGTGCATTCAGTAGAAACCATGCTTCAGGTACCCATACAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| 3UTR-3UTR CCA 90 bp | TGGGTACCTGAAGCATGGTTTCTACTGAATGCACATCACTTTTATACCATTGTAAGGGAAGTTGTGCTTTaGTTGACTCTGATCTTACAT | + |
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Preference number: 2 (lower is better) Translates to: WVPEAWFLLNAHHFYTIVREVVL*LTLILH Trigger: ATGTAAGATCAGAGTCAACCAAAGCACAACTTCCCT...TACAATGGTATAAAAGTGATGTGCATTCAGTAGAAACCATGCTTCAGGTACCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| 3UTR-3UTR GCA 90 bp | AATTATAATTTTGGGCTGCAGGAACATGGCCATAGAATCCAACAGAAATCTTCTTTGGAATTGGCTATTTaGAGACTTGAGGTTGGTCTA | + |
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Preference number: 2 (lower is better) Translates to: NYNFGLQEHGHRIQQKSSLELAI*RLEVGL Trigger: TAGACCAACCTCAAGTCTGCAAATAGCCAATTCCAA...AGAAGATTTCTGTTGGATTCTATGGCCATGTTCCTGCAGCCCAAAATTATAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| 3UTR-3UTR GCA 90 bp | TGGGTACCTGAAGCATGGTTTCTACTGAATGCACATCACTTTTATACCATTGTAATTATAATTTTGGGCTaGAGGAACATGGCCATAGAA | + |
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Preference number: 2 (lower is better) Translates to: WVPEAWFLLNAHHFYTIVIIILG*RNMAIE Trigger: TTCTATGGCCATGTTCCTGCAGCCCAAAATTATAAT...TACAATGGTATAAAAGTGATGTGCATTCAGTAGAAACCATGCTTCAGGTACCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| 3UTR-3UTR CCA 90 bp | GTTGTATGGGTACCTGAAGCATGGTTTCTACTGAATGCACATCACTTTTATACCAGTAGTCATGTTATTTaGAGATATGGAGGAAACTAC | + |
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Preference number: 2 (lower is better) Translates to: VVWVPEAWFLLNAHHFYTSSHVI*RYGGNY Trigger: GTAGTTTCCTCCATATCTCCAAATAACATGACTACT...GGTATAAAAGTGATGTGCATTCAGTAGAAACCATGCTTCAGGTACCCATACAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| 3UTR-3UTR CCA 90 bp | TGGGTACCTGAAGCATGGTTTCTACTGAATGCACATCACTTTTATACCATTGTAACTATATTGAGAGGATaGAGAGTAGAGAAGTGCAAA | + |
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Preference number: 2 (lower is better) Translates to: WVPEAWFLLNAHHFYTIVTILRG*RVEKCK Trigger: TTTGCACTTCTCTACTCTCCATCCTCTCAATATAGT...TACAATGGTATAAAAGTGATGTGCATTCAGTAGAAACCATGCTTCAGGTACCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| 3UTR-3UTR CCA 90 bp | TGGGTACCTGAAGCATGGTTTCTACTGAATGCACATCACTTTTATACCATTGTATGTTATTTGGAGATATaGAGGAAACTACCAAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: WVPEAWFLLNAHHFYTIVCYLEI*RKLPRN Trigger: GTTTCTTGGTAGTTTCCTCCATATCTCCAAATAACA...TACAATGGTATAAAAGTGATGTGCATTCAGTAGAAACCATGCTTCAGGTACCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| 3UTR-3UTR CAA 90 bp | AAGCGTTATCGTCCAGGGAATAGGCGTAGGATAGGAAGAGGTGGGGCAGGAGGAGAAGAACACTTCACTTaGGACCACCTAACAGTCAAA | + |
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Preference number: 3 (lower is better) Translates to: KRYRPGNRRRIGRGGAGGEEHFT*DHLTVK Trigger: TTTGACTGTTAGGTGGTCCAAAGTGAAGTGTTCTTC...TCCTCCTGCCCCACCTCTTCCTATCCTACGCCTATTCCCTGGACGATAACGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| 3UTR TCA 72 bp | AGCCATTGTAACTCAGGAACCCTCTGTAAAGTGTTGTaGACTATATTGAGAGGATGGAGAGTAGAGAAGTGC | + |
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Preference number: 3 (lower is better) Translates to: SHCNSGTLCKVL*TILRGWRVEKC Trigger: GCACTTCTCTACTCTCCATCCTCTCAATATAGTTCACAACACTTTACAGAGGGTTCCTGAGTTACAATGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| 3UTR-3UTR CAA 90 bp | GTTGTATGGGTACCTGAAGCATGGTTTCTACTGAATGCACATCACTTTTATACCTGGCTATTTGCAGACTaGAGGTTGGTCTATAACACA | + |
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Preference number: 3 (lower is better) Translates to: VVWVPEAWFLLNAHHFYTWLFAD*RLVYNT Trigger: TGTGTTATAGACCAACCTCAAGTCTGCAAATAGCCA...GGTATAAAAGTGATGTGCATTCAGTAGAAACCATGCTTCAGGTACCCATACAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| 3UTR-3UTR CAA 90 bp | GTTGTATGGGTACCTGAAGCATGGTTTCTACTGAATGCACATCACTTTTATACCTTTGCAGACTTGAGGTaGGTCTATAACACACTTTTC | + |
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Preference number: 3 (lower is better) Translates to: VVWVPEAWFLLNAHHFYTFADLR*VYNTLF Trigger: GAAAAGTGTGTTATAGACCAACCTCAAGTCTGCAAA...GGTATAAAAGTGATGTGCATTCAGTAGAAACCATGCTTCAGGTACCCATACAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| 3UTR-3UTR CAA 90 bp | TGGGTACCTGAAGCATGGTTTCTACTGAATGCACATCACTTTTATACCATTGTATGGCTATTTGCAGACTaGAGGTTGGTCTATAACACA | + |
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Preference number: 3 (lower is better) Translates to: WVPEAWFLLNAHHFYTIVWLFAD*RLVYNT Trigger: TGTGTTATAGACCAACCTCAAGTCTGCAAATAGCCA...TACAATGGTATAAAAGTGATGTGCATTCAGTAGAAACCATGCTTCAGGTACCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| 3UTR-3UTR CAA 90 bp | TGGGTACCTGAAGCATGGTTTCTACTGAATGCACATCACTTTTATACCATTGTAAAGGGAAGTTGTGCTTaGGTTGACTCTGATCTTACA | + |
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Preference number: 3 (lower is better) Translates to: WVPEAWFLLNAHHFYTIVKGSCA*VDSDLT Trigger: TGTAAGATCAGAGTCAACCAAAGCACAACTTCCCTT...TACAATGGTATAAAAGTGATGTGCATTCAGTAGAAACCATGCTTCAGGTACCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| 3UTR-3UTR CAA 90 bp | AATTATAATTTTGGGCTGCAGGAACATGGCCATAGAATCCAACAGAAATCTTCTAAGGGAAGTTGTGCTTaGGTTGACTCTGATCTTACA | + |
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Preference number: 3 (lower is better) Translates to: NYNFGLQEHGHRIQQKSSKGSCA*VDSDLT Trigger: TGTAAGATCAGAGTCAACCAAAGCACAACTTCCCTT...AGAAGATTTCTGTTGGATTCTATGGCCATGTTCCTGCAGCCCAAAATTATAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| 3UTR-3UTR CAA 90 bp | AAACTAATAAAAATAATTAAGCGTTATCGTCCAGGGAATAGGCGTAGGATAGGATCTTACATACCTAATTaGTTCCCGAAGAACACTTCA | + |
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Preference number: 3 (lower is better) Translates to: KLIKIIKRYRPGNRRRIGSYIPN*FPKNTS Trigger: TGAAGTGTTCTTCGGGAACAAATTAGGTATGTAAGA...TCCTATCCTACGCCTATTCCCTGGACGATAACGCTTAATTATTTTTATTAGTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| 3UTR TCA 72 bp | ACTGAAAGTCAAAAACGAAATAGTTGTATGGGTACCTaGAGCATGGTTTCTACTGAATGCACATCACTTTTA | + |
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Preference number: 3 (lower is better) Translates to: TESQKRNSCMGT*SMVSTECTSLL Trigger: TAAAAGTGATGTGCATTCAGTAGAAACCATGCTTCAGGTACCCATACAACTATTTCGTTTTTGACTTTCAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| 3UTR CCA 72 bp | GTCAAAAACGAAATAGTTGTATGGGTACCTGAAGCATaGTTTCTACTGAATGCACATCACTTTTATACCATT | + |
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Preference number: 3 (lower is better) Translates to: VKNEIVVWVPEA*FLLNAHHFYTI Trigger: AATGGTATAAAAGTGATGTGCATTCAGTAGAAACCATGCTTCAGGTACCCATACAACTATTTCGTTTTTGAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| 3UTR CCA 72 bp | AATACTATACTGAAAGTCAAAAACGAAATAGTTGTATaGGTACCTGAAGCATGGTTTCTACTGAATGCACAT | + |
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Preference number: 3 (lower is better) Translates to: NTILKVKNEIVV*VPEAWFLLNAH Trigger: ATGTGCATTCAGTAGAAACCATGCTTCAGGTACCCATACAACTATTTCGTTTTTGACTTTCAGTATAGTATT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| CDS-3UTR GCA 90 bp | AAGCGTTATCGTCCAGGGAATAGGCGTAGGATAGGAAGAGGTGGGGCAGGAGGAGCTGGTTGGGCAGCATaGCGATGGCCGTTTTCGGTC | + |
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Preference number: 4 (lower is better) Translates to: KRYRPGNRRRIGRGGAGGAGWAA*RWPFSV Trigger: GACCGAAAACGGCCATCGGCATGCTGCCCAACCAGC...TCCTCCTGCCCCACCTCTTCCTATCCTACGCCTATTCCCTGGACGATAACGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| CDS-3UTR GCA 90 bp | AAGCGTTATCGTCCAGGGAATAGGCGTAGGATAGGAAGAGGTGGGGCAGGAGGAGGTCTTTGGACATGGTaGTGGTTGGGCAGCATGCCG | + |
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Preference number: 4 (lower is better) Translates to: KRYRPGNRRRIGRGGAGGGLWTW*WLGSMP Trigger: CGGCATGCTGCCCAACCAGCACCATGTCCAAAGACC...TCCTCCTGCCCCACCTCTTCCTATCCTACGCCTATTCCCTGGACGATAACGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| CDS-3UTR CCA 90 bp | AAGCGTTATCGTCCAGGGAATAGGCGTAGGATAGGAAGAGGTGGGGCAGGAGGAAGTACGGCTTGTTTTTaGCTTTCCGGCTGCTACAGC | + |
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Preference number: 4 (lower is better) Translates to: KRYRPGNRRRIGRGGAGGSTACF*LSGCYS Trigger: GCTGTAGCAGCCGGAAAGCCAAAAACAAGCCGTACT...TCCTCCTGCCCCACCTCTTCCTATCCTACGCCTATTCCCTGGACGATAACGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509000.3 |
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| CDS-3UTR GCA 90 bp | AAGCGTTATCGTCCAGGGAATAGGCGTAGGATAGGAAGAGGTGGGGCAGGAGGATTTTGGCTTTCCGGCTaGTACAGCATAGAGACCACA | + |
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Preference number: 4 (lower is better) Translates to: KRYRPGNRRRIGRGGAGGFWLSG*YSIETT Trigger: TGTGGTCTCTATGCTGTAGCAGCCGGAAAGCCAAAA...TCCTCCTGCCCCACCTCTTCCTATCCTACGCCTATTCCCTGGACGATAACGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509000.3 |
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| CDS-3UTR CCA 90 bp | AAGCGTTATCGTCCAGGGAATAGGCGTAGGATAGGAAGAGGTGGGGCAGGAGGAGAATTTTCAGGTCTTTaGACATGGTGCTGGTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: KRYRPGNRRRIGRGGAGGEFSGL*TWCWLG Trigger: GCCCAACCAGCACCATGTCCAAAGACCTGAAAATTC...TCCTCCTGCCCCACCTCTTCCTATCCTACGCCTATTCCCTGGACGATAACGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| CDS-3UTR TCA 90 bp | AAGCGTTATCGTCCAGGGAATAGGCGTAGGATAGGAAGAGGTGGGGCAGGAGGAGGCTATTTGCAGACTTaGGGTTGGTCTATAACACAC | + |
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Preference number: 4 (lower is better) Translates to: KRYRPGNRRRIGRGGAGGGYLQT*GWSITH Trigger: GTGTGTTATAGACCAACCTCAAGTCTGCAAATAGCC...TCCTCCTGCCCCACCTCTTCCTATCCTACGCCTATTCCCTGGACGATAACGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| CDS-3UTR CCA 90 bp | AAGCGTTATCGTCCAGGGAATAGGCGTAGGATAGGAAGAGGTGGGGCAGGAGGACAGTTAGAAACCGCATaGCATTTTCAGCATCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: KRYRPGNRRRIGRGGAGGQLETA*HFQHQL Trigger: GAGCTGATGCTGAAAATGCCATGCGGTTTCTAACTG...TCCTCCTGCCCCACCTCTTCCTATCCTACGCCTATTCCCTGGACGATAACGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| CDS-3UTR TCA 90 bp | AATTATAATTTTGGGCTGCAGGAACATGGCCATAGAATCCAACAGAAATCTTCTGGAGTACCGCGGAGCTaGGGGGAGGACTGGCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: NYNFGLQEHGHRIQQKSSGVPRS*GEDWQV Trigger: CACCTGCCAGTCCTCCCCTCAGCTCCGCGGTACTCC...AGAAGATTTCTGTTGGATTCTATGGCCATGTTCCTGCAGCCCAAAATTATAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000639756.1 |
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| CDS-3UTR CCA 90 bp | AAGCGTTATCGTCCAGGGAATAGGCGTAGGATAGGAAGAGGTGGGGCAGGAGGAAGGGAAGTTGTGCTTTaGTTGACTCTGATCTTACAT | + |
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Preference number: 4 (lower is better) Translates to: KRYRPGNRRRIGRGGAGGREVVL*LTLILH Trigger: ATGTAAGATCAGAGTCAACCAAAGCACAACTTCCCT...TCCTCCTGCCCCACCTCTTCCTATCCTACGCCTATTCCCTGGACGATAACGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| CDS-3UTR TCA 90 bp | GTTGTATGGGTACCTGAAGCATGGTTTCTACTGAATGCACATCACTTTTATACCACAGTGACTGGACCTTaGGGTTGCCTGGAGTACCGC | + |
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Preference number: 4 (lower is better) Translates to: VVWVPEAWFLLNAHHFYTTVTGP*GCLEYR Trigger: GCGGTACTCCAGGCAACCTCAAGGTCCAGTCACTGT...GGTATAAAAGTGATGTGCATTCAGTAGAAACCATGCTTCAGGTACCCATACAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639756.1 |
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| CDS-3UTR GCA 90 bp | TGGGTACCTGAAGCATGGTTTCTACTGAATGCACATCACTTTTATACCATTGTAGCTGGTTGGGCAGCATaGCGATGGCCGTTTTCGGTC | + |
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Preference number: 4 (lower is better) Translates to: WVPEAWFLLNAHHFYTIVAGWAA*RWPFSV Trigger: GACCGAAAACGGCCATCGGCATGCTGCCCAACCAGC...TACAATGGTATAAAAGTGATGTGCATTCAGTAGAAACCATGCTTCAGGTACCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| CDS-3UTR CCA 90 bp | GTTGTATGGGTACCTGAAGCATGGTTTCTACTGAATGCACATCACTTTTATACCTGGGCAGCATGCCGATaGCCGTTTTCGGTCCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: VVWVPEAWFLLNAHHFYTWAACR*PFSVQL Trigger: AAGCTGGACCGAAAACGGCCATCGGCATGCTGCCCA...GGTATAAAAGTGATGTGCATTCAGTAGAAACCATGCTTCAGGTACCCATACAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| CDS-3UTR CCA 90 bp | TTTGCAGACTTGAGGTTGGTCTATAACACACTTTTCAAGGGGTTAGAGTTAAAAGGACATGGTGCTGGTTaGGCAGCATGCCGATGGCCG | + |
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Preference number: 4 (lower is better) Translates to: FADLRLVYNTLFKGLELKGHGAG*AACRWP Trigger: CGGCCATCGGCATGCTGCCCAACCAGCACCATGTCC...TTTTAACTCTAACCCCTTGAAAAGTGTGTTATAGACCAACCTCAAGTCTGCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| CDS-3UTR CCA 90 bp | AAGCGTTATCGTCCAGGGAATAGGCGTAGGATAGGAAGAGGTGGGGCAGGAGGAACTATATTGAGAGGATaGAGAGTAGAGAAGTGCAAA | + |
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Preference number: 4 (lower is better) Translates to: KRYRPGNRRRIGRGGAGGTILRG*RVEKCK Trigger: TTTGCACTTCTCTACTCTCCATCCTCTCAATATAGT...TCCTCCTGCCCCACCTCTTCCTATCCTACGCCTATTCCCTGGACGATAACGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| CDS-3UTR CCA 90 bp | AATTATAATTTTGGGCTGCAGGAACATGGCCATAGAATCCAACAGAAATCTTCTCTCTTCTTCCACAGGTaGGTGGCTCGGCACACGGCG | + |
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Preference number: 4 (lower is better) Translates to: NYNFGLQEHGHRIQQKSSLFFHR*VARHTA Trigger: CGCCGTGTGCCGAGCCACCCACCTGTGGAAGAAGAG...AGAAGATTTCTGTTGGATTCTATGGCCATGTTCCTGCAGCCCAAAATTATAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639756.1 |
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| CDS-3UTR CCA 90 bp | TGGGTACCTGAAGCATGGTTTCTACTGAATGCACATCACTTTTATACCATTGTATGGGCAGCATGCCGATaGCCGTTTTCGGTCCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: WVPEAWFLLNAHHFYTIVWAACR*PFSVQL Trigger: AAGCTGGACCGAAAACGGCCATCGGCATGCTGCCCA...TACAATGGTATAAAAGTGATGTGCATTCAGTAGAAACCATGCTTCAGGTACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| CDS-3UTR CCA 90 bp | AAACTAATAAAAATAATTAAGCGTTATCGTCCAGGGAATAGGCGTAGGATAGGAGGACATGGTGCTGGTTaGGCAGCATGCCGATGGCCG | + |
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Preference number: 4 (lower is better) Translates to: KLIKIIKRYRPGNRRRIGGHGAG*AACRWP Trigger: CGGCCATCGGCATGCTGCCCAACCAGCACCATGTCC...TCCTATCCTACGCCTATTCCCTGGACGATAACGCTTAATTATTTTTATTAGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| CDS-3UTR CCA 90 bp | AATTATAATTTTGGGCTGCAGGAACATGGCCATAGAATCCAACAGAAATCTTCTGACCTTGAGGTTGCCTaGAGTACCGCGGAGCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: NYNFGLQEHGHRIQQKSSDLEVA*STAELR Trigger: CCTCAGCTCCGCGGTACTCCAGGCAACCTCAAGGTC...AGAAGATTTCTGTTGGATTCTATGGCCATGTTCCTGCAGCCCAAAATTATAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639756.1 |
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| CDS-3UTR CCA 90 bp | TGGGTACCTGAAGCATGGTTTCTACTGAATGCACATCACTTTTATACCATTGTAGTTCAGGAGGGGTACTaGGGAGGTCTGACTCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: WVPEAWFLLNAHHFYTIVVQEGY*GGLTQA Trigger: AGCCTGAGTCAGACCTCCCCAGTACCCCTCCTGAAC...TACAATGGTATAAAAGTGATGTGCATTCAGTAGAAACCATGCTTCAGGTACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000639756.1 |
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| CDS-3UTR CCA 90 bp | AAACTAATAAAAATAATTAAGCGTTATCGTCCAGGGAATAGGCGTAGGATAGGATCTTCCACAGGTGGGTaGCTCGGCACACGGCGGCAA | + |
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Preference number: 4 (lower is better) Translates to: KLIKIIKRYRPGNRRRIGSSTGG*LGTRRQ Trigger: TTGCCGCCGTGTGCCGAGCCACCCACCTGTGGAAGA...TCCTATCCTACGCCTATTCCCTGGACGATAACGCTTAATTATTTTTATTAGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000639756.1 |
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| CDS-3UTR CCA 90 bp | GTTGTATGGGTACCTGAAGCATGGTTTCTACTGAATGCACATCACTTTTATACCTCAGGCTACAGTGACTaGACCTTGAGGTTGCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: VVWVPEAWFLLNAHHFYTSGYSD*TLRLPG Trigger: TCCAGGCAACCTCAAGGTCCAGTCACTGTAGCCTGA...GGTATAAAAGTGATGTGCATTCAGTAGAAACCATGCTTCAGGTACCCATACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639756.1 |
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| CDS-3UTR TCA 90 bp | TGGGTACCTGAAGCATGGTTTCTACTGAATGCACATCACTTTTATACCATTGTAGAAATTTACGGCCACTaGACTGATGGTCCCGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: WVPEAWFLLNAHHFYTIVEIYGH*TDGPGS Trigger: GCTACCGGGACCATCAGTTCAGTGGCCGTAAATTTC...TACAATGGTATAAAAGTGATGTGCATTCAGTAGAAACCATGCTTCAGGTACCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| CDS-3UTR TCA 90 bp | TGGGTACCTGAAGCATGGTTTCTACTGAATGCACATCACTTTTATACCATTGTACCACCACTGAAAACCTaGTCAACGAGGGCATCTGCA | + |
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Preference number: 4 (lower is better) Translates to: WVPEAWFLLNAHHFYTIVPPLKT*STRASA Trigger: TGCAGATGCCCTCGTTGATCAGGTTTTCAGTGGTGG...TACAATGGTATAAAAGTGATGTGCATTCAGTAGAAACCATGCTTCAGGTACCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000639756.1 |
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| CDS-3UTR GCA 90 bp | GTTGTATGGGTACCTGAAGCATGGTTTCTACTGAATGCACATCACTTTTATACCCCATTTTCCCCAAGTTaGAGGGCACATATAGGACCC | + |
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Preference number: 4 (lower is better) Translates to: VVWVPEAWFLLNAHHFYTPFSPS*RAHIGP Trigger: GGGTCCTATATGTGCCCTGCAACTTGGGGAAAATGG...GGTATAAAAGTGATGTGCATTCAGTAGAAACCATGCTTCAGGTACCCATACAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000509000.3 |
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| CDS-3UTR GCA 90 bp | AAACTAATAAAAATAATTAAGCGTTATCGTCCAGGGAATAGGCGTAGGATAGGACCCACCAGCCTCTGCTaGACCCTCATCTCTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KLIKIIKRYRPGNRRRIGPTSLC*TLISGK Trigger: TTTGCCAGAGATGAGGGTGCAGCAGAGGCTGGTGGG...TCCTATCCTACGCCTATTCCCTGGACGATAACGCTTAATTATTTTTATTAGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000639756.1 |
||
| CDS-3UTR CCA 90 bp | AATTATAATTTTGGGCTGCAGGAACATGGCCATAGAATCCAACAGAAATCTTCTCTTTGGACATGGTGCTaGTTGGGCAGCATGCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: NYNFGLQEHGHRIQQKSSLWTWC*LGSMPM Trigger: CATCGGCATGCTGCCCAACCAGCACCATGTCCAAAG...AGAAGATTTCTGTTGGATTCTATGGCCATGTTCCTGCAGCCCAAAATTATAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
||
| CDS-3UTR CCA 90 bp | TGGGTACCTGAAGCATGGTTTCTACTGAATGCACATCACTTTTATACCATTGTATCAGGTCTTTGGACATaGTGCTGGTTGGGCAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: WVPEAWFLLNAHHFYTIVSGLWT*CWLGSM Trigger: CATGCTGCCCAACCAGCACCATGTCCAAAGACCTGA...TACAATGGTATAAAAGTGATGTGCATTCAGTAGAAACCATGCTTCAGGTACCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
||
| CDS-3UTR TCA 90 bp | AATTATAATTTTGGGCTGCAGGAACATGGCCATAGAATCCAACAGAAATCTTCTCCGCGACCATACTGTTaGCCCTCTCTAAAACCGACA | + |
|
Preference number: 4 (lower is better) Translates to: NYNFGLQEHGHRIQQKSSPRPYC*PSLKPT Trigger: TGTCGGTTTTAGAGAGGGTCAACAGTATGGTCGCGG...AGAAGATTTCTGTTGGATTCTATGGCCATGTTCCTGCAGCCCAAAATTATAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
||
| CDS-3UTR TCA 90 bp | TTTGCAGACTTGAGGTTGGTCTATAACACACTTTTCAAGGGGTTAGAGTTAAAAAACTCATCCCTTACCTaGCCCCCAGATTTACCGCGA | + |
|
Preference number: 4 (lower is better) Translates to: FADLRLVYNTLFKGLELKNSSLT*PPDLPR Trigger: TCGCGGTAAATCTGGGGGTCAGGTAAGGGATGAGTT...TTTTAACTCTAACCCCTTGAAAAGTGTGTTATAGACCAACCTCAAGTCTGCAAA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
||
| CDS-3UTR GCA 90 bp | AAACTAATAAAAATAATTAAGCGTTATCGTCCAGGGAATAGGCGTAGGATAGGACCATGCTCTCCATCCTaGTCTTCTTCCACAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KLIKIIKRYRPGNRRRIGPCSPS*SSSTGG Trigger: CCCACCTGTGGAAGAAGAGCAGGATGGAGAGCATGG...TCCTATCCTACGCCTATTCCCTGGACGATAACGCTTAATTATTTTTATTAGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000639756.1 |
||
| CDS-3UTR GCA 90 bp | TGGGTACCTGAAGCATGGTTTCTACTGAATGCACATCACTTTTATACCATTGTAACATCGACCAGACCATaGTCTCCATCCTGCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WVPEAWFLLNAHHFYTIVTSTRP*SPSCSS Trigger: AGAAGAGCAGGATGGAGAGCATGGTCTGGTCGATGT...TACAATGGTATAAAAGTGATGTGCATTCAGTAGAAACCATGCTTCAGGTACCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639756.1 |
||
| CDS-3UTR GCA 90 bp | AATTATAATTTTGGGCTGCAGGAACATGGCCATAGAATCCAACAGAAATCTTCTATCAACGAGGGCATCTaGAACCGCAACATCGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: NYNFGLQEHGHRIQQKSSINEGI*NRNIDQ Trigger: CTGGTCGATGTTGCGGTTGCAGATGCCCTCGTTGAT...AGAAGATTTCTGTTGGATTCTATGGCCATGTTCCTGCAGCCCAAAATTATAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639756.1 |
||
| CDS-3UTR CCA 90 bp | AAACTAATAAAAATAATTAAGCGTTATCGTCCAGGGAATAGGCGTAGGATAGGACTTTGGACATGGTGCTaGTTGGGCAGCATGCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: KLIKIIKRYRPGNRRRIGLWTWC*LGSMPM Trigger: CATCGGCATGCTGCCCAACCAGCACCATGTCCAAAG...TCCTATCCTACGCCTATTCCCTGGACGATAACGCTTAATTATTTTTATTAGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
||
| CDS-3UTR CCA 90 bp | TTTGCAGACTTGAGGTTGGTCTATAACACACTTTTCAAGGGGTTAGAGTTAAAATCAGGTCTTTGGACATaGTGCTGGTTGGGCAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: FADLRLVYNTLFKGLELKSGLWT*CWLGSM Trigger: CATGCTGCCCAACCAGCACCATGTCCAAAGACCTGA...TTTTAACTCTAACCCCTTGAAAAGTGTGTTATAGACCAACCTCAAGTCTGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
||
| CDS-3UTR TCA 90 bp | AAACTAATAAAAATAATTAAGCGTTATCGTCCAGGGAATAGGCGTAGGATAGGAGAAATTTACGGCCACTaGACTGATGGTCCCGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KLIKIIKRYRPGNRRRIGEIYGH*TDGPGS Trigger: GCTACCGGGACCATCAGTTCAGTGGCCGTAAATTTC...TCCTATCCTACGCCTATTCCCTGGACGATAACGCTTAATTATTTTTATTAGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
||
| CDS-3UTR CCA 90 bp | AAACTAATAAAAATAATTAAGCGTTATCGTCCAGGGAATAGGCGTAGGATAGGACTGCACCCTCATCTCTaGCAAAAGGGGCAACTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KLIKIIKRYRPGNRRRIGLHPHL*QKGQLG Trigger: TCCTAGTTGCCCCTTTTGCCAGAGATGAGGGTGCAG...TCCTATCCTACGCCTATTCCCTGGACGATAACGCTTAATTATTTTTATTAGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000639756.1 |
||
| CDS-3UTR TCA 90 bp | GTTGTATGGGTACCTGAAGCATGGTTTCTACTGAATGCACATCACTTTTATACCAGTTGTATGGGTACCTaGAGCATGGTTTCTACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VVWVPEAWFLLNAHHFYTSCMGT*SMVSTE Trigger: TTCAGTAGAAACCATGCTTCAGGTACCCATACAACT...GGTATAAAAGTGATGTGCATTCAGTAGAAACCATGCTTCAGGTACCCATACAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
||
| CDS-3UTR CCA 90 bp | TTTGCAGACTTGAGGTTGGTCTATAACACACTTTTCAAGGGGTTAGAGTTAAAAGAATTTTCAGGTCTTTaGACATGGTGCTGGTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FADLRLVYNTLFKGLELKEFSGL*TWCWLG Trigger: GCCCAACCAGCACCATGTCCAAAGACCTGAAAATTC...TTTTAACTCTAACCCCTTGAAAAGTGTGTTATAGACCAACCTCAAGTCTGCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
||
| CDS-3UTR TCA 90 bp | TGGGTACCTGAAGCATGGTTTCTACTGAATGCACATCACTTTTATACCATTGTACCTCCTCTACCAGAATaGAAATCTTCACGAAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: WVPEAWFLLNAHHFYTIVPPLPE*KSSRNS Trigger: TGAGTTTCGTGAAGATTTTCATTCTGGTAGAGGAGG...TACAATGGTATAAAAGTGATGTGCATTCAGTAGAAACCATGCTTCAGGTACCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
||
| CDS-3UTR TCA 90 bp | TTTGCAGACTTGAGGTTGGTCTATAACACACTTTTCAAGGGGTTAGAGTTAAAAGGCTATTTGCAGACTTaGGGTTGGTCTATAACACAC | + |
|
Preference number: 4 (lower is better) Translates to: FADLRLVYNTLFKGLELKGYLQT*GWSITH Trigger: GTGTGTTATAGACCAACCTCAAGTCTGCAAATAGCC...TTTTAACTCTAACCCCTTGAAAAGTGTGTTATAGACCAACCTCAAGTCTGCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
||
| CDS-3UTR TCA 90 bp | TGGGTACCTGAAGCATGGTTTCTACTGAATGCACATCACTTTTATACCATTGTAAGTAATTTTTCCTGCTaGAATTTACGGCCACTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: WVPEAWFLLNAHHFYTIVSNFSC*NLRPLN Trigger: GTTCAGTGGCCGTAAATTTCAGCAGGAAAAATTACT...TACAATGGTATAAAAGTGATGTGCATTCAGTAGAAACCATGCTTCAGGTACCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
||
| CDS-3UTR TCA 90 bp | TTTGCAGACTTGAGGTTGGTCTATAACACACTTTTCAAGGGGTTAGAGTTAAAACCTCCTCTACCAGAATaGAAATCTTCACGAAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: FADLRLVYNTLFKGLELKPPLPE*KSSRNS Trigger: TGAGTTTCGTGAAGATTTTCATTCTGGTAGAGGAGG...TTTTAACTCTAACCCCTTGAAAAGTGTGTTATAGACCAACCTCAAGTCTGCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
||
| CDS-3UTR TCA 90 bp | TGGGTACCTGAAGCATGGTTTCTACTGAATGCACATCACTTTTATACCATTGTACTCTGTAAAGTGTTGTaGACTATATTGAGAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: WVPEAWFLLNAHHFYTIVLCKVL*TILRGW Trigger: CCATCCTCTCAATATAGTTCACAACACTTTACAGAG...TACAATGGTATAAAAGTGATGTGCATTCAGTAGAAACCATGCTTCAGGTACCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
||
| CDS-3UTR TCA 90 bp | TTTGCAGACTTGAGGTTGGTCTATAACACACTTTTCAAGGGGTTAGAGTTAAAAAGTTGTATGGGTACCTaGAGCATGGTTTCTACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FADLRLVYNTLFKGLELKSCMGT*SMVSTE Trigger: TTCAGTAGAAACCATGCTTCAGGTACCCATACAACT...TTTTAACTCTAACCCCTTGAAAAGTGTGTTATAGACCAACCTCAAGTCTGCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
||
| CDS-3UTR CCA 90 bp | AAACTAATAAAAATAATTAAGCGTTATCGTCCAGGGAATAGGCGTAGGATAGGACAGTTAGAAACCGCATaGCATTTTCAGCATCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KLIKIIKRYRPGNRRRIGQLETA*HFQHQL Trigger: GAGCTGATGCTGAAAATGCCATGCGGTTTCTAACTG...TCCTATCCTACGCCTATTCCCTGGACGATAACGCTTAATTATTTTTATTAGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
||
| CDS-3UTR CCA 90 bp | TTTGCAGACTTGAGGTTGGTCTATAACACACTTTTCAAGGGGTTAGAGTTAAAATGGGTACCTGAAGCATaGTTTCTACTGAATGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: FADLRLVYNTLFKGLELKWVPEA*FLLNAH Trigger: ATGTGCATTCAGTAGAAACCATGCTTCAGGTACCCA...TTTTAACTCTAACCCCTTGAAAAGTGTGTTATAGACCAACCTCAAGTCTGCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
||
| CDS-3UTR TCA 90 bp | AATTATAATTTTGGGCTGCAGGAACATGGCCATAGAATCCAACAGAAATCTTCTAGTAATTTTTCCTGCTaGAATTTACGGCCACTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: NYNFGLQEHGHRIQQKSSSNFSC*NLRPLN Trigger: GTTCAGTGGCCGTAAATTTCAGCAGGAAAAATTACT...AGAAGATTTCTGTTGGATTCTATGGCCATGTTCCTGCAGCCCAAAATTATAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
||
| CDS-3UTR TCA 90 bp | AATTATAATTTTGGGCTGCAGGAACATGGCCATAGAATCCAACAGAAATCTTCTCTCTGTAAAGTGTTGTaGACTATATTGAGAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: NYNFGLQEHGHRIQQKSSLCKVL*TILRGW Trigger: CCATCCTCTCAATATAGTTCACAACACTTTACAGAG...AGAAGATTTCTGTTGGATTCTATGGCCATGTTCCTGCAGCCCAAAATTATAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
||
| CDS-3UTR CCA 90 bp | TGGGTACCTGAAGCATGGTTTCTACTGAATGCACATCACTTTTATACCATTGTAGCATCAGCTCTGTTATaGCATTCTACAAAGCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: WVPEAWFLLNAHHFYTIVASALL*HSTKQK Trigger: TTTTTGCTTTGTAGAATGCCATAACAGAGCTGATGC...TACAATGGTATAAAAGTGATGTGCATTCAGTAGAAACCATGCTTCAGGTACCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
||
| CDS-3UTR CCA 90 bp | AAACTAATAAAAATAATTAAGCGTTATCGTCCAGGGAATAGGCGTAGGATAGGATGGGTACCTGAAGCATaGTTTCTACTGAATGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: KLIKIIKRYRPGNRRRIGWVPEA*FLLNAH Trigger: ATGTGCATTCAGTAGAAACCATGCTTCAGGTACCCA...TCCTATCCTACGCCTATTCCCTGGACGATAACGCTTAATTATTTTTATTAGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
||
| CDS-3UTR GCA 90 bp | AAACTAATAAAAATAATTAAGCGTTATCGTCCAGGGAATAGGCGTAGGATAGGATTGGAATTGGCTATTTaGAGACTTGAGGTTGGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: KLIKIIKRYRPGNRRRIGLELAI*RLEVGL Trigger: TAGACCAACCTCAAGTCTGCAAATAGCCAATTCCAA...TCCTATCCTACGCCTATTCCCTGGACGATAACGCTTAATTATTTTTATTAGTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
||
| CDS-3UTR GCA 90 bp | TTTGCAGACTTGAGGTTGGTCTATAACACACTTTTCAAGGGGTTAGAGTTAAAAATTATAATTTTGGGCTaGAGGAACATGGCCATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FADLRLVYNTLFKGLELKIIILG*RNMAIE Trigger: TTCTATGGCCATGTTCCTGCAGCCCAAAATTATAAT...TTTTAACTCTAACCCCTTGAAAAGTGTGTTATAGACCAACCTCAAGTCTGCAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
||
| CDS-3UTR GCA 90 bp | AATTATAATTTTGGGCTGCAGGAACATGGCCATAGAATCCAACAGAAATCTTCTATTATAATTTTGGGCTaGAGGAACATGGCCATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NYNFGLQEHGHRIQQKSSIIILG*RNMAIE Trigger: TTCTATGGCCATGTTCCTGCAGCCCAAAATTATAAT...AGAAGATTTCTGTTGGATTCTATGGCCATGTTCCTGCAGCCCAAAATTATAATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
||
| CDS-3UTR CCA 90 bp | AAACTAATAAAAATAATTAAGCGTTATCGTCCAGGGAATAGGCGTAGGATAGGAAGGGAAGTTGTGCTTTaGTTGACTCTGATCTTACAT | + |
|
Preference number: 4 (lower is better) Translates to: KLIKIIKRYRPGNRRRIGREVVL*LTLILH Trigger: ATGTAAGATCAGAGTCAACCAAAGCACAACTTCCCT...TCCTATCCTACGCCTATTCCCTGGACGATAACGCTTAATTATTTTTATTAGTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
||
| CDS-3UTR CCA 90 bp | TGGGTACCTGAAGCATGGTTTCTACTGAATGCACATCACTTTTATACCATTGTAAGTAGTCATGTTATTTaGAGATATGGAGGAAACTAC | + |
|
Preference number: 4 (lower is better) Translates to: WVPEAWFLLNAHHFYTIVSSHVI*RYGGNY Trigger: GTAGTTTCCTCCATATCTCCAAATAACATGACTACT...TACAATGGTATAAAAGTGATGTGCATTCAGTAGAAACCATGCTTCAGGTACCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
||
| CDS-3UTR CCA 90 bp | AAACTAATAAAAATAATTAAGCGTTATCGTCCAGGGAATAGGCGTAGGATAGGAGCATCAGCTCTGTTATaGCATTCTACAAAGCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KLIKIIKRYRPGNRRRIGASALL*HSTKQK Trigger: TTTTTGCTTTGTAGAATGCCATAACAGAGCTGATGC...TCCTATCCTACGCCTATTCCCTGGACGATAACGCTTAATTATTTTTATTAGTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
||
| CDS-3UTR CCA 90 bp | AATTATAATTTTGGGCTGCAGGAACATGGCCATAGAATCCAACAGAAATCTTCTTGTTATTTGGAGATATaGAGGAAACTACCAAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: NYNFGLQEHGHRIQQKSSCYLEI*RKLPRN Trigger: GTTTCTTGGTAGTTTCCTCCATATCTCCAAATAACA...AGAAGATTTCTGTTGGATTCTATGGCCATGTTCCTGCAGCCCAAAATTATAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
||
| CDS-3UTR CCA 90 bp | AAACTAATAAAAATAATTAAGCGTTATCGTCCAGGGAATAGGCGTAGGATAGGAAGTAGTCATGTTATTTaGAGATATGGAGGAAACTAC | + |
|
Preference number: 4 (lower is better) Translates to: KLIKIIKRYRPGNRRRIGSSHVI*RYGGNY Trigger: GTAGTTTCCTCCATATCTCCAAATAACATGACTACT...TCCTATCCTACGCCTATTCCCTGGACGATAACGCTTAATTATTTTTATTAGTTT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
||
| CDS GCA 90 bp | AGGGCATCTGCAACCGCAACATCGACCAGACCATGCTCTCCATCCTaGTCTTCTTCCACAGGTGGGTGGCTCGGCACACGGCGGCAACTC | + |
|
Preference number: 5 (lower is better) Translates to: RASATATSTRPCSPS*SSSTGGWLGTRRQL Trigger: GAGTTGCCGCCGTGTGCCGAGCCACCCACCTGTGGAAGAAGAGCAGGATGGAGAGCATGGTCTGGTCGATGTTGCGGTTGCAGATGCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639756.1 |
||
| CDS-3UTR CAA 90 bp | AAGCGTTATCGTCCAGGGAATAGGCGTAGGATAGGAAGAGGTGGGGCAGGAGGATGGACATGGTGCTGGTaGGGCAGCATGCCGATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: KRYRPGNRRRIGRGGAGGWTWCW*GSMPMA Trigger: GGCCATCGGCATGCTGCCCAACCAGCACCATGTCCA...TCCTCCTGCCCCACCTCTTCCTATCCTACGCCTATTCCCTGGACGATAACGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
||
| CDS CCA 90 bp | AATTTTCAGGTCTTTGGACATGGTGCTGGTTGGGCAGCATGCCGATaGCCGTTTTCGGTCCAGCTTGGCAGCAGTGACACCACCACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: NFQVFGHGAGWAACR*PFSVQLGSSDTTTE Trigger: TTCAGTGGTGGTGTCACTGCTGCCAAGCTGGACCGAAAACGGCCATCGGCATGCTGCCCAACCAGCACCATGTCCAAAGACCTGAAAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
||
| CDS-3UTR CAA 90 bp | AAGCGTTATCGTCCAGGGAATAGGCGTAGGATAGGAAGAGGTGGGGCAGGAGGACCACCACTGAAAACCTaGGGATCCTGTCAAGAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: KRYRPGNRRRIGRGGAGGPPLKT*GSCQER Trigger: TCGCTCTTGACAGGATCCCAAGGTTTTCAGTGGTGG...TCCTCCTGCCCCACCTCTTCCTATCCTACGCCTATTCCCTGGACGATAACGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509000.3 |
||
| CDS-3UTR CAA 90 bp | AAGCGTTATCGTCCAGGGAATAGGCGTAGGATAGGAAGAGGTGGGGCAGGAGGAAAGTACGGCTTGTTTTaGGCTTTCCGGCTGCTACAG | + |
|
Preference number: 5 (lower is better) Translates to: KRYRPGNRRRIGRGGAGGKYGLF*AFRLLQ Trigger: CTGTAGCAGCCGGAAAGCCAAAAACAAGCCGTACTT...TCCTCCTGCCCCACCTCTTCCTATCCTACGCCTATTCCCTGGACGATAACGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509000.3 |
||
| CDS GCA 90 bp | CCAAAGCAGGGTCTTTACATAGAATTTTCAGGTCTTTGGACATGGTaGTGGTTGGGCAGCATGCCGATGGCCGTTTTCGGTCCAGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PKQGLYIEFSGLWTW*WLGSMPMAVFGPAW Trigger: CCAAGCTGGACCGAAAACGGCCATCGGCATGCTGCCCAACCAGCACCATGTCCAAAGACCTGAAAATTCTATGTAAAGACCCTGCTTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
||
| CDS CCA 90 bp | AAGCAGGGTCTTTACATAGAATTTTCAGGTCTTTGGACATGGTGCTaGTTGGGCAGCATGCCGATGGCCGTTTTCGGTCCAGCTTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KQGLYIEFSGLWTWC*LGSMPMAVFGPAWQ Trigger: CTGCCAAGCTGGACCGAAAACGGCCATCGGCATGCTGCCCAACCAGCACCATGTCCAAAGACCTGAAAATTCTATGTAAAGACCCTGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
||
| CDS CCA 90 bp | GCTCCAAAGCAGGGTCTTTACATAGAATTTTCAGGTCTTTGGACATaGTGCTGGTTGGGCAGCATGCCGATGGCCGTTTTCGGTCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: APKQGLYIEFSGLWT*CWLGSMPMAVFGPA Trigger: AGCTGGACCGAAAACGGCCATCGGCATGCTGCCCAACCAGCACCATGTCCAAAGACCTGAAAATTCTATGTAAAGACCCTGCTTTGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
||
| CDS-3UTR CAA 90 bp | AAGCGTTATCGTCCAGGGAATAGGCGTAGGATAGGAAGAGGTGGGGCAGGAGGAAGAATTTTCAGGTCTTaGGACATGGTGCTGGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: KRYRPGNRRRIGRGGAGGRIFRS*DMVLVG Trigger: CCCAACCAGCACCATGTCCAAAGACCTGAAAATTCT...TCCTCCTGCCCCACCTCTTCCTATCCTACGCCTATTCCCTGGACGATAACGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
||
| CDS CCA 90 bp | AGCTCAGCTCCAAAGCAGGGTCTTTACATAGAATTTTCAGGTCTTTaGACATGGTGCTGGTTGGGCAGCATGCCGATGGCCGTTTTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSAPKQGLYIEFSGL*TWCWLGSMPMAVFG Trigger: ACCGAAAACGGCCATCGGCATGCTGCCCAACCAGCACCATGTCCAAAGACCTGAAAATTCTATGTAAAGACCCTGCTTTGGAGCTGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
||
| CDS TCA 90 bp | TGGAGCTTTCCTTCAGTAATTTTTCCTGCTGAAATTTACGGCCACTaGACTGATGGTCCCGGTAGCAGCTCAGCTCCAAAGCAGGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: WSFPSVIFPAEIYGH*TDGPGSSSAPKQGL Trigger: AAGACCCTGCTTTGGAGCTGAGCTGCTACCGGGACCATCAGTTCAGTGGCCGTAAATTTCAGCAGGAAAAATTACTGAAGGAAAGCTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| CDS-3UTR CAA 90 bp | TGGGTACCTGAAGCATGGTTTCTACTGAATGCACATCACTTTTATACCATTGTATGGACATGGTGCTGGTaGGGCAGCATGCCGATGGCC | + |
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Preference number: 5 (lower is better) Translates to: WVPEAWFLLNAHHFYTIVWTWCW*GSMPMA Trigger: GGCCATCGGCATGCTGCCCAACCAGCACCATGTCCA...TACAATGGTATAAAAGTGATGTGCATTCAGTAGAAACCATGCTTCAGGTACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| CDS-3UTR CAA 90 bp | AAGCGTTATCGTCCAGGGAATAGGCGTAGGATAGGAAGAGGTGGGGCAGGAGGATCTTACATACCTAATTaGTTCCCGAAGAACACTTCA | + |
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Preference number: 5 (lower is better) Translates to: KRYRPGNRRRIGRGGAGGSYIPN*FPKNTS Trigger: TGAAGTGTTCTTCGGGAACAAATTAGGTATGTAAGA...TCCTCCTGCCCCACCTCTTCCTATCCTACGCCTATTCCCTGGACGATAACGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| CDS-3UTR CAA 90 bp | AATTATAATTTTGGGCTGCAGGAACATGGCCATAGAATCCAACAGAAATCTTCTGACTGGACCTTGAGGTaGCCTGGAGTACCGCGGAGC | + |
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Preference number: 5 (lower is better) Translates to: NYNFGLQEHGHRIQQKSSDWTLR*PGVPRS Trigger: GCTCCGCGGTACTCCAGGCAACCTCAAGGTCCAGTC...AGAAGATTTCTGTTGGATTCTATGGCCATGTTCCTGCAGCCCAAAATTATAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639756.1 |
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| CDS-3UTR CAA 90 bp | AATTATAATTTTGGGCTGCAGGAACATGGCCATAGAATCCAACAGAAATCTTCTCGTTTTCGGTCCAGCTaGGCAGCAGTGACACCACCA | + |
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Preference number: 5 (lower is better) Translates to: NYNFGLQEHGHRIQQKSSRFRSS*AAVTPP Trigger: TGGTGGTGTCACTGCTGCCAAGCTGGACCGAAAACG...AGAAGATTTCTGTTGGATTCTATGGCCATGTTCCTGCAGCCCAAAATTATAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| CDS-3UTR CAA 90 bp | TGGGTACCTGAAGCATGGTTTCTACTGAATGCACATCACTTTTATACCATTGTAAGCGAGAAGTACGGCTaGTTTTTGGCTTTCCGGCTG | + |
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Preference number: 5 (lower is better) Translates to: WVPEAWFLLNAHHFYTIVSEKYG*FLAFRL Trigger: CAGCCGGAAAGCCAAAAACAAGCCGTACTTCTCGCT...TACAATGGTATAAAAGTGATGTGCATTCAGTAGAAACCATGCTTCAGGTACCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509000.3 |
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| CDS-3UTR CAA 90 bp | AATTATAATTTTGGGCTGCAGGAACATGGCCATAGAATCCAACAGAAATCTTCTTACAGTGACTGGACCTaGAGGTTGCCTGGAGTACCG | + |
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Preference number: 5 (lower is better) Translates to: NYNFGLQEHGHRIQQKSSYSDWT*RLPGVP Trigger: CGGTACTCCAGGCAACCTCAAGGTCCAGTCACTGTA...AGAAGATTTCTGTTGGATTCTATGGCCATGTTCCTGCAGCCCAAAATTATAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639756.1 |
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| CDS-3UTR CAA 90 bp | TGGGTACCTGAAGCATGGTTTCTACTGAATGCACATCACTTTTATACCATTGTATCCATTTTCCCCAAGTaGCAGGGCACATATAGGACC | + |
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Preference number: 5 (lower is better) Translates to: WVPEAWFLLNAHHFYTIVSIFPK*QGTYRT Trigger: GGTCCTATATGTGCCCTGCAACTTGGGGAAAATGGA...TACAATGGTATAAAAGTGATGTGCATTCAGTAGAAACCATGCTTCAGGTACCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000509000.3 |
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| CDS-3UTR CAA 90 bp | AATTATAATTTTGGGCTGCAGGAACATGGCCATAGAATCCAACAGAAATCTTCTACCGCGACCATACTGTaGACCCTCTCTAAAACCGAC | + |
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Preference number: 5 (lower is better) Translates to: NYNFGLQEHGHRIQQKSSTATIL*TLSKTD Trigger: GTCGGTTTTAGAGAGGGTCAACAGTATGGTCGCGGT...AGAAGATTTCTGTTGGATTCTATGGCCATGTTCCTGCAGCCCAAAATTATAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| CDS-3UTR CAA 90 bp | TTTGCAGACTTGAGGTTGGTCTATAACACACTTTTCAAGGGGTTAGAGTTAAAAGAAGAACACTTCACTTaGGACCACCTAACAGTCAAA | + |
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Preference number: 5 (lower is better) Translates to: FADLRLVYNTLFKGLELKEEHFT*DHLTVK Trigger: TTTGACTGTTAGGTGGTCCAAAGTGAAGTGTTCTTC...TTTTAACTCTAACCCCTTGAAAAGTGTGTTATAGACCAACCTCAAGTCTGCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| CDS-3UTR CAA 90 bp | AATTATAATTTTGGGCTGCAGGAACATGGCCATAGAATCCAACAGAAATCTTCTGAAGAACACTTCACTTaGGACCACCTAACAGTCAAA | + |
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Preference number: 5 (lower is better) Translates to: NYNFGLQEHGHRIQQKSSEEHFT*DHLTVK Trigger: TTTGACTGTTAGGTGGTCCAAAGTGAAGTGTTCTTC...AGAAGATTTCTGTTGGATTCTATGGCCATGTTCCTGCAGCCCAAAATTATAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| CDS-3UTR CAA 90 bp | TTTGCAGACTTGAGGTTGGTCTATAACACACTTTTCAAGGGGTTAGAGTTAAAATTTGCAGACTTGAGGTaGGTCTATAACACACTTTTC | + |
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Preference number: 5 (lower is better) Translates to: FADLRLVYNTLFKGLELKFADLR*VYNTLF Trigger: GAAAAGTGTGTTATAGACCAACCTCAAGTCTGCAAA...TTTTAACTCTAACCCCTTGAAAAGTGTGTTATAGACCAACCTCAAGTCTGCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| CDS-3UTR CAA 90 bp | AAACTAATAAAAATAATTAAGCGTTATCGTCCAGGGAATAGGCGTAGGATAGGATGGCTATTTGCAGACTaGAGGTTGGTCTATAACACA | + |
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Preference number: 5 (lower is better) Translates to: KLIKIIKRYRPGNRRRIGWLFAD*RLVYNT Trigger: TGTGTTATAGACCAACCTCAAGTCTGCAAATAGCCA...TCCTATCCTACGCCTATTCCCTGGACGATAACGCTTAATTATTTTTATTAGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| CDS-3UTR CAA 90 bp | AAACTAATAAAAATAATTAAGCGTTATCGTCCAGGGAATAGGCGTAGGATAGGAAAGGGAAGTTGTGCTTaGGTTGACTCTGATCTTACA | + |
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Preference number: 5 (lower is better) Translates to: KLIKIIKRYRPGNRRRIGKGSCA*VDSDLT Trigger: TGTAAGATCAGAGTCAACCAAAGCACAACTTCCCTT...TCCTATCCTACGCCTATTCCCTGGACGATAACGCTTAATTATTTTTATTAGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| CDS CAA 90 bp | TTCTTCCACAGGTGGGTGGCTCGGCACACGGCGGCAACTCGGTCCTaGCTCCCACCAGCCTCTGCTGCACCCTCATCTCTGGCAAAAGGG | + |
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Preference number: 6 (lower is better) Translates to: FFHRWVARHTAATRS*LPPASAAPSSLAKG Trigger: CCCTTTTGCCAGAGATGAGGGTGCAGCAGAGGCTGGTGGGAGCAAGGACCGAGTTGCCGCCGTGTGCCGAGCCACCCACCTGTGGAAGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639756.1 |
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| CDS TCA 72 bp | TGGGGAGGTCTGACTCAGGCTACAGTGACTGGACCTTaGGGTTGCCTGGAGTACCGCGGAGCTGAGGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: WGGLTQATVTGP*GCLEYRGAEGR Trigger: CCTCCCCTCAGCTCCGCGGTACTCCAGGCAACCTCAAGGTCCAGTCACTGTAGCCTGAGTCAGACCTCCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000639756.1 |
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| CDS GCA 72 bp | GCAACCGCAACATCGACCAGACCATGCTCTCCATCCTaGTCTTCTTCCACAGGTGGGTGGCTCGGCACACGG | + |
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Preference number: 6 (lower is better) Translates to: ATATSTRPCSPS*SSSTGGWLGTR Trigger: CCGTGTGCCGAGCCACCCACCTGTGGAAGAAGAGCAGGATGGAGAGCATGGTCTGGTCGATGTTGCGGTTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639756.1 |
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| CDS CCA 72 bp | GTCTTTGGACATGGTGCTGGTTGGGCAGCATGCCGATaGCCGTTTTCGGTCCAGCTTGGCAGCAGTGACACC | + |
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Preference number: 6 (lower is better) Translates to: VFGHGAGWAACR*PFSVQLGSSDT Trigger: GGTGTCACTGCTGCCAAGCTGGACCGAAAACGGCCATCGGCATGCTGCCCAACCAGCACCATGTCCAAAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| CDS GCA 72 bp | ACGAGGGCATCTGCAACCGCAACATCGACCAGACCATaGTCTCCATCCTGCTCTTCTTCCACAGGTGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: TRASATATSTRP*SPSCSSSTGGW Trigger: CCACCCACCTGTGGAAGAAGAGCAGGATGGAGAGCATGGTCTGGTCGATGTTGCGGTTGCAGATGCCCTCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639756.1 |
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| CDS CAA 90 bp | ATGGTGCTGGTTGGGCAGCATGCCGATGGCCGTTTTCGGTCCAGCTaGGCAGCAGTGACACCACCACTGAAAACCTTGGGATCCTGTCAA | + |
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Preference number: 6 (lower is better) Translates to: MVLVGQHADGRFRSS*AAVTPPLKTLGSCQ Trigger: TTGACAGGATCCCAAGGTTTTCAGTGGTGGTGTCACTGCTGCCAAGCTGGACCGAAAACGGCCATCGGCATGCTGCCCAACCAGCACCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509000.3 |
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| CDS GCA 72 bp | TTTCAGGTCTTTGGACATGGTGCTGGTTGGGCAGCATaGCGATGGCCGTTTTCGGTCCAGCTTGGCAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: FQVFGHGAGWAA*RWPFSVQLGSS Trigger: ACTGCTGCCAAGCTGGACCGAAAACGGCCATCGGCATGCTGCCCAACCAGCACCATGTCCAAAGACCTGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| CDS GCA 72 bp | GACACCACCACTGAAAACCTGATCAACGAGGGCATCTaGAACCGCAACATCGACCAGACCATGCTCTCCATC | + |
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Preference number: 6 (lower is better) Translates to: DTTTENLINEGI*NRNIDQTMLSI Trigger: GATGGAGAGCATGGTCTGGTCGATGTTGCGGTTGCAGATGCCCTCGTTGATCAGGTTTTCAGTGGTGGTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639756.1 |
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| CDS CAA 90 bp | CAGGGTCTTTACATAGAATTTTCAGGTCTTTGGACATGGTGCTGGTaGGGCAGCATGCCGATGGCCGTTTTCGGTCCAGCTTGGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: QGLYIEFSGLWTWCW*GSMPMAVFGPAWQQ Trigger: CTGCTGCCAAGCTGGACCGAAAACGGCCATCGGCATGCTGCCCAACCAGCACCATGTCCAAAGACCTGAAAATTCTATGTAAAGACCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| CDS CCA 72 bp | GGGATCCTGTCAAGAGCGAGAAGTACGGCTTGTTTTTaGCTTTCCGGCTGCTACAGCATAGAGACCACAACC | + |
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Preference number: 6 (lower is better) Translates to: GILSRARSTACF*LSGCYSIETTT Trigger: GGTTGTGGTCTCTATGCTGTAGCAGCCGGAAAGCCAAAAACAAGCCGTACTTCTCGCTCTTGACAGGATCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000509000.3 |
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| CDS CAA 90 bp | CAGCTCAGCTCCAAAGCAGGGTCTTTACATAGAATTTTCAGGTCTTaGGACATGGTGCTGGTTGGGCAGCATGCCGATGGCCGTTTTCGG | + |
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Preference number: 6 (lower is better) Translates to: QLSSKAGSLHRIFRS*DMVLVGQHADGRFR Trigger: CCGAAAACGGCCATCGGCATGCTGCCCAACCAGCACCATGTCCAAAGACCTGAAAATTCTATGTAAAGACCCTGCTTTGGAGCTGAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| CDS GCA 72 bp | AGAGCGAGAAGTACGGCTTGTTTTTGGCTTTCCGGCTaGTACAGCATAGAGACCACAACCCCACCTCCATTT | + |
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Preference number: 6 (lower is better) Translates to: RARSTACFWLSG*YSIETTTPPPF Trigger: AAATGGAGGTGGGGTTGTGGTCTCTATGCTGTAGCAGCCGGAAAGCCAAAAACAAGCCGTACTTCTCGCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509000.3 |
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| CDS CAA 72 bp | TGGGATCCTGTCAAGAGCGAGAAGTACGGCTTGTTTTaGGCTTTCCGGCTGCTACAGCATAGAGACCACAAC | + |
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Preference number: 6 (lower is better) Translates to: WDPVKSEKYGLF*AFRLLQHRDHN Trigger: GTTGTGGTCTCTATGCTGTAGCAGCCGGAAAGCCAAAAACAAGCCGTACTTCTCGCTCTTGACAGGATCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509000.3 |
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| CDS CAA 72 bp | TACATAGAATTTTCAGGTCTTTGGACATGGTGCTGGTaGGGCAGCATGCCGATGGCCGTTTTCGGTCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: YIEFSGLWTWCW*GSMPMAVFGPA Trigger: AGCTGGACCGAAAACGGCCATCGGCATGCTGCCCAACCAGCACCATGTCCAAAGACCTGAAAATTCTATGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| CDS CAA 72 bp | CCTTACCTGACCCCCAGATTTACCGCGACCATACTGTaGACCCTCTCTAAAACCGACATCCCAATCAGTGCA | + |
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Preference number: 6 (lower is better) Translates to: PYLTPRFTATIL*TLSKTDIPISA Trigger: TGCACTGATTGGGATGTCGGTTTTAGAGAGGGTCAACAGTATGGTCGCGGTAAATCTGGGGGTCAGGTAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| CDS GCA 72 bp | GGTCTTTACATAGAATTTTCAGGTCTTTGGACATGGTaGTGGTTGGGCAGCATGCCGATGGCCGTTTTCGGT | + |
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Preference number: 6 (lower is better) Translates to: GLYIEFSGLWTW*WLGSMPMAVFG Trigger: ACCGAAAACGGCCATCGGCATGCTGCCCAACCAGCACCATGTCCAAAGACCTGAAAATTCTATGTAAAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| CDS CCA 72 bp | CTTTACATAGAATTTTCAGGTCTTTGGACATGGTGCTaGTTGGGCAGCATGCCGATGGCCGTTTTCGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: LYIEFSGLWTWC*LGSMPMAVFGP Trigger: TGGACCGAAAACGGCCATCGGCATGCTGCCCAACCAGCACCATGTCCAAAGACCTGAAAATTCTATGTAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| CDS CCA 72 bp | CAGGGTCTTTACATAGAATTTTCAGGTCTTTGGACATaGTGCTGGTTGGGCAGCATGCCGATGGCCGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: QGLYIEFSGLWT*CWLGSMPMAVF Trigger: GAAAACGGCCATCGGCATGCTGCCCAACCAGCACCATGTCCAAAGACCTGAAAATTCTATGTAAAGACCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| CDS CAA 72 bp | AAACCTTGGGATCCTGTCAAGAGCGAGAAGTACGGCTaGTTTTTGGCTTTCCGGCTGCTACAGCATAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: KPWDPVKSEKYG*FLAFRLLQHRD Trigger: GTCTCTATGCTGTAGCAGCCGGAAAGCCAAAAACAAGCCGTACTTCTCGCTCTTGACAGGATCCCAAGGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000509000.3 |
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| CDS TCA 72 bp | CCTTCAGTAATTTTTCCTGCTGAAATTTACGGCCACTaGACTGATGGTCCCGGTAGCAGCTCAGCTCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: PSVIFPAEIYGH*TDGPGSSSAPK Trigger: CTTTGGAGCTGAGCTGCTACCGGGACCATCAGTTCAGTGGCCGTAAATTTCAGCAGGAAAAATTACTGAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| CDS CAA 90 bp | AAACTCATCCCTTACCTGACCCCCAGATTTACCGCGACCATACTGTaGACCCTCTCTAAAACCGACATCCCAATCAGTGCAGATAATCCA | + |
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Preference number: 6 (lower is better) Translates to: KLIPYLTPRFTATIL*TLSKTDIPISADNP Trigger: TGGATTATCTGCACTGATTGGGATGTCGGTTTTAGAGAGGGTCAACAGTATGGTCGCGGTAAATCTGGGGGTCAGGTAAGGGATGAGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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| CDS CCA 72 bp | TCCATTCATCTAGGCAGGTCCCAGTTAGAAACCGCATaGCATTTTCAGCATCAGCTCTGTTATGGCATTCTA | + |
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Preference number: 6 (lower is better) Translates to: SIHLGRSQLETA*HFQHQLCYGIL Trigger: TAGAATGCCATAACAGAGCTGATGCTGAAAATGCCATGCGGTTTCTAACTGGGACCTGCCTAGATGAATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509000.3 ENST00000639756.1 |
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