RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NCAPH2 (Homo sapiens)

Ensembl gene IDs: ENSG00000025770

Ensembl transcript IDs: ENST00000299821.15, ENST00000395698.7, ENST00000395701.7, ENST00000418794.1, ENST00000420993.7, ENST00000518394.5, ENST00000520297.5, ENST00000522048.1, ENST00000522304.1, ENST00000523045.5

Found 619 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTCCAGACACTCCCTCCTACCAGCCCGACTGCAGAGAGGCGCCTTaGCAACCGGCGGCCATCCCAGGTTGCCGTGAGCTCGACAGGGCT +
Preference number: 1 (lower is better)
Translates to: PPDTPSYQPDCREAP*QPAAIPGCRELDRA
Trigger: AGCCCTGTCGAGCTCACGGCAACCTGGGATGGCCGCCGGTTGCCAAGGCGCCTCTCTGCAGTCGGGCTGGTAGGAGGGAGTGTCTGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395698.7
3UTR TCA 90 bp AGGGGGCAGCGTAGGTCTGGAAGCGCTTGTGCGCTCGCTGGTGCGTaGGCAGTCTCAGGGACATGGTGTCCACGGCCATCTCCAGCCCGG +
Preference number: 1 (lower is better)
Translates to: RGQRRSGSACALAGA*AVSGTWCPRPSPAR
Trigger: CCGGGCTGGAGATGGCCGTGGACACCATGTCCCTGAGACTGCTCACGCACCAGCGAGCGCACAAGCGCTTCCAGACCTACGCTGCCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395701.7
3UTR GCA 90 bp CCCGACTGCAGAGAGGCGCCTTGGCAACCGGCGGCCATCCCAGGTTaGCGTGAGCTCGACAGGGCTCAAATCCTTGGACGCCAGCCCACT +
Preference number: 1 (lower is better)
Translates to: PDCREAPWQPAAIPG*RELDRAQILGRQPT
Trigger: AGTGGGCTGGCGTCCAAGGATTTGAGCCCTGTCGAGCTCACGGCAACCTGGGATGGCCGCCGGTTGCCAAGGCGCCTCTCTGCAGTCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395698.7
3UTR CCA 90 bp GGCTGCAGCAGCAAAAGCGAACAGAAGCCCTGCGCCAGGCAGCTGTaGGCCAGGGCGACTTCCACCTGCTGGATCACAGAGGCCGGGCTC +
Preference number: 1 (lower is better)
Translates to: GCSSKSEQKPCARQL*ARATSTCWITEAGL
Trigger: GAGCCCGGCCTCTGTGATCCAGCAGGTGGAAGTCGCCCTGGCCCACAGCTGCCTGGCGCAGGGCTTCTGTTCGCTTTTGCTGCTGCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR GCA 90 bp GGCCAGGGCGACTTCCACCTGCTGGATCACAGAGGCCGGGCTCGCTaGAAGGCTGACTTCCGGGGCCAGTGGGTGCTGATGTACTTTGGC +
Preference number: 1 (lower is better)
Translates to: GQGDFHLLDHRGRAR*KADFRGQWVLMYFG
Trigger: GCCAAAGTACATCAGCACCCACTGGCCCCGGAAGTCAGCCTTGCAGCGAGCCCGGCCTCTGTGATCCAGCAGGTGGAAGTCGCCCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR TCA 90 bp CTGCAGAGAGGCGCCTTGGCAACCGGCGGCCATCCCAGGTTGCCGTaGGCTCGACAGGGCTCAAATCCTTGGACGCCAGCCCACTACTCT +
Preference number: 1 (lower is better)
Translates to: LQRGALATGGHPRLP*ARQGSNPWTPAHYS
Trigger: AGAGTAGTGGGCTGGCGTCCAAGGATTTGAGCCCTGTCGAGCTCACGGCAACCTGGGATGGCCGCCGGTTGCCAAGGCGCCTCTCTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395698.7
3UTR GCA 90 bp GCCCTGACATCTGCCCAGACGAGCTGGAGAAGCTGGTGCAGGTGGTaGGGCAGCTGGAAGCAGAGCCTGGTTTGCCTCCAGTGCAGCCTG +
Preference number: 1 (lower is better)
Translates to: ALTSAQTSWRSWCRW*GSWKQSLVCLQCSL
Trigger: CAGGCTGCACTGGAGGCAAACCAGGCTCTGCTTCCAGCTGCCGCACCACCTGCACCAGCTTCTCCAGCTCGTCTGGGCAGATGTCAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR GCA 90 bp TGCAGGTGGTGCGGCAGCTGGAAGCAGAGCCTGGTTTGCCTCCAGTaGAGCCTGTCTTCATCACTGTGGACCCCGAGCGGGACGACGTTG +
Preference number: 1 (lower is better)
Translates to: CRWCGSWKQSLVCLQ*SLSSSLWTPSGTTL
Trigger: CAACGTCGTCCCGCTCGGGGTCCACAGTGATGAAGACAGGCTGCACTGGAGGCAAACCAGGCTCTGCTTCCAGCTGCCGCACCACCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR GCA 90 bp AGAAGCTGGTGCAGGTGGTGCGGCAGCTGGAAGCAGAGCCTGGTTTaGCTCCAGTGCAGCCTGTCTTCATCACTGTGGACCCCGAGCGGG +
Preference number: 1 (lower is better)
Translates to: RSWCRWCGSWKQSLV*LQCSLSSSLWTPSG
Trigger: CCCGCTCGGGGTCCACAGTGATGAAGACAGGCTGCACTGGAGGCAAACCAGGCTCTGCTTCCAGCTGCCGCACCACCTGCACCAGCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR CCA 90 bp TGCCTGTTAAGCCTGAACGTGGGCTGGGTCCTTCAGATGGGTGGCTaGTCTCAAGTCGCAGGGGCAGCCCAGGCACTGTCCTGGGCCTTC +
Preference number: 1 (lower is better)
Translates to: CLLSLNVGWVLQMGG*SQVAGAAQALSWAF
Trigger: GAAGGCCCAGGACAGTGCCTGGGCTGCCCCTGCGACTTGAGACCAGCCACCCATCTGAAGGACCCAGCCCACGTTCAGGCTTAACAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR GCA 90 bp TCAAAAGGGCTGGTTGCAGGACGGGCTGCAAGACAGGTGGGCTTCTaGCCCAGACCAGTGGTCTGGGGCCAAGGCCATACCACTGTCCTC +
Preference number: 1 (lower is better)
Translates to: SKGLVAGRAARQVGF*PRPVVWGQGHTTVL
Trigger: GAGGACAGTGGTATGGCCTTGGCCCCAGACCACTGGTCTGGGGCAGAAGCCCACCTGTCTTGCAGCCCGTCCTGCAACCAGCCCTTTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395698.7
3UTR CCA 90 bp TTGCAGGACGGGCTGCAAGACAGGTGGGCTTCTGCCCCAGACCAGTaGTCTGGGGCCAAGGCCATACCACTGTCCTCCTTGTGCAAGGTG +
Preference number: 1 (lower is better)
Translates to: LQDGLQDRWASAPDQ*SGAKAIPLSSLCKV
Trigger: CACCTTGCACAAGGAGGACAGTGGTATGGCCTTGGCCCCAGACCACTGGTCTGGGGCAGAAGCCCACCTGTCTTGCAGCCCGTCCTGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395698.7
3UTR CCA 90 bp GGAGCAGATCGGCTGAGCAGATCTCAGACAGTGTGCGGCGGCACATaGCGGCTTTCCGCAGTGTCCTGTCTTGAGCCACTGCAGTCTGGG +
Preference number: 1 (lower is better)
Translates to: GADRLSRSQTVCGGT*RLSAVSCLEPLQSG
Trigger: CCCAGACTGCAGTGGCTCAAGACAGGACACTGCGGAAAGCCGCCATGTGCCGCCGCACACTGTCTGAGATCTGCTCAGCCGATCTGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR TCA 90 bp GCAGGGTGCGGTGACAGGCTGGTGATCCCAGGTAGAGGACAGGAGTaGCAGGTGTGGTTGCCCAGGTGTGGATGTTTGGTGGAGGTGGAG +
Preference number: 1 (lower is better)
Translates to: AGCGDRLVIPGRGQE*QVWLPRCGCLVEVE
Trigger: CTCCACCTCCACCAAACATCCACACCTGGGCAACCACACCTGTCACTCCTGTCCTCTACCTGGGATCACCAGCCTGTCACCGCACCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR CCA 90 bp GCTCAGGTGAGCAGCTGCAAATGCCTGTTAAGCCTGAACGTGGGCTaGGTCCTTCAGATGGGTGGCTGGTCTCAAGTCGCAGGGGCAGCC +
Preference number: 1 (lower is better)
Translates to: AQVSSCKCLLSLNVG*VLQMGGWSQVAGAA
Trigger: GGCTGCCCCTGCGACTTGAGACCAGCCACCCATCTGAAGGACCCAGCCCACGTTCAGGCTTAACAGGCATTTGCAGCTGCTCACCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR TCA 90 bp GACAGTGTGCGGCGGCACATGGCGGCTTTCCGCAGTGTCCTGTCTTaGGCCACTGCAGTCTGGGCCCCATCATTAAACGGGCTGCGTTTA +
Preference number: 1 (lower is better)
Translates to: DSVRRHMAAFRSVLS*ATAVWAPSLNGLRL
Trigger: TAAACGCAGCCCGTTTAATGATGGGGCCCAGACTGCAGTGGCTCAAGACAGGACACTGCGGAAAGCCGCCATGTGCCGCCGCACACTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR TCA 90 bp CCATGGCCCGCTACGTCCAGGACTTCCACCCAAGACTGTTGGGTCTaGCCGGCTCCACCAAACAGGTTGCCCAGGCTAGTCACAGTTACC +
Preference number: 1 (lower is better)
Translates to: PWPATSRTSTQDCWV*PAPPNRLPRLVTVT
Trigger: GGTAACTGTGACTAGCCTGGGCAACCTGTTTGGTGGAGCCGGTCAGACCCAACAGTCTTGGGTGGAAGTCCTGGACGTAGCGGGCCATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR TCA 90 bp AGTGCAGCCTGTCTTCATCACTGTGGACCCCGAGCGGGACGACGTTaGAGCCATGGCCCGCTACGTCCAGGACTTCCACCCAAGACTGTT +
Preference number: 1 (lower is better)
Translates to: SAACLHHCGPRAGRR*SHGPLRPGLPPKTV
Trigger: AACAGTCTTGGGTGGAAGTCCTGGACGTAGCGGGCCATGGCTTCAACGTCGTCCCGCTCGGGGTCCACAGTGATGAAGACAGGCTGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR GCA 90 bp ATTACTACGGCCGGAGCAGATCGGCTGAGCAGATCTCAGACAGTGTaGGGCGGCACATGGCGGCTTTCCGCAGTGTCCTGTCTTGAGCCA +
Preference number: 1 (lower is better)
Translates to: ITTAGADRLSRSQTV*GGTWRLSAVSCLEP
Trigger: TGGCTCAAGACAGGACACTGCGGAAAGCCGCCATGTGCCGCCGCACACTGTCTGAGATCTGCTCAGCCGATCTGCTCCGGCCGTAGTAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR GCA 90 bp GCGGCGGCACATGGCGGCTTTCCGCAGTGTCCTGTCTTGAGCCACTaGAGTCTGGGCCCCATCATTAAACGGGCTGCGTTTAATCTGTGT +
Preference number: 1 (lower is better)
Translates to: AAAHGGFPQCPVLSH*SLGPIIKRAAFNLC
Trigger: ACACAGATTAAACGCAGCCCGTTTAATGATGGGGCCCAGACTGCAGTGGCTCAAGACAGGACACTGCGGAAAGCCGCCATGTGCCGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR TCA 90 bp GTGAGCTCGACAGGGCTCAAATCCTTGGACGCCAGCCCACTACTCTaGGGAGCATCAGTTCTGCTCAGAGAGGGGAGGAACACAGAAGCT +
Preference number: 1 (lower is better)
Translates to: VSSTGLKSLDASPLL*GASVLLREGRNTEA
Trigger: AGCTTCTGTGTTCCTCCCCTCTCTGAGCAGAACTGATGCTCCTCAGAGTAGTGGGCTGGCGTCCAAGGATTTGAGCCCTGTCGAGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395698.7
3UTR GCA 90 bp CTGAGGAGCATCAGTTCTGCTCAGAGAGGGGAGGAACACAGAAGCTaGTCTTCAAAAGGGCTGGTTGCAGGACGGGCTGCAAGACAGGTG +
Preference number: 1 (lower is better)
Translates to: LRSISSAQRGEEHRS*SSKGLVAGRAARQV
Trigger: CACCTGTCTTGCAGCCCGTCCTGCAACCAGCCCTTTTGAAGAGCAGCTTCTGTGTTCCTCCCCTCTCTGAGCAGAACTGATGCTCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395698.7
3UTR GCA 90 bp ATGAGGACCAGGACTACATCGTGGACCACTCCATTGCCATCTACCTaGTCAACCCTGACGGCCTCTTCACGGATTACTACGGCCGGAGCA +
Preference number: 1 (lower is better)
Translates to: MRTRTTSWTTPLPST*STLTASSRITTAGA
Trigger: TGCTCCGGCCGTAGTAATCCGTGAAGAGGCCGTCAGGGTTGAGCAGGTAGATGGCAATGGAGTGGTCCACGATGTAGTCCTGGTCCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR TCA 90 bp CAGGTGTGGTTGCCCAGGTGTGGATGTTTGGTGGAGGTGGAGTTCTaGGCTCAGGTGAGCAGCTGCAAATGCCTGTTAAGCCTGAACGTG +
Preference number: 1 (lower is better)
Translates to: QVWLPRCGCLVEVEF*AQVSSCKCLLSLNV
Trigger: CACGTTCAGGCTTAACAGGCATTTGCAGCTGCTCACCTGAGCTCAGAACTCCACCTCCACCAAACATCCACACCTGGGCAACCACACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR CCA 90 bp TGTACTACAATGCAGGCCCCAAGGATGAGGACCAGGACTACATCGTaGACCACTCCATTGCCATCTACCTGCTCAACCCTGACGGCCTCT +
Preference number: 1 (lower is better)
Translates to: CTTMQAPRMRTRTTS*TTPLPSTCSTLTAS
Trigger: AGAGGCCGTCAGGGTTGAGCAGGTAGATGGCAATGGAGTGGTCCACGATGTAGTCCTGGTCCTCATCCTTGGGGCCTGCATTGTAGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR CCA 90 bp TTATTGCAAATAGATAACGTGGTTAGTTCAGGCAAGGCATGCACTTaGAATGCTTTCCGTCAGCAAGAGGTTCACCTTGCTGAGGTGCAG +
Preference number: 1 (lower is better)
Translates to: LLQIDNVVSSGKACT*NAFRQQEVHLAEVQ
Trigger: CTGCACCTCAGCAAGGTGAACCTCTTGCTGACGGAAAGCATTCCAAGTGCATGCCTTGCCTGAACTAACCACGTTATCTATTTGCAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR GCA 90 bp ATGGGTTTATTGCAAATAGATAACGTGGTTAGTTCAGGCAAGGCATaGACTTGGAATGCTTTCCGTCAGCAAGAGGTTCACCTTGCTGAG +
Preference number: 1 (lower is better)
Translates to: MGLLQIDNVVSSGKA*TWNAFRQQEVHLAE
Trigger: CTCAGCAAGGTGAACCTCTTGCTGACGGAAAGCATTCCAAGTGCATGCCTTGCCTGAACTAACCACGTTATCTATTTGCAATAAACCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR-3UTR GCA 90 bp GCTCTAGGCTGGGTACAGTTGACCCCGGGGGTTGAGGGAGGCAGCAATGGCCTCGCGGCCATCCCAGGTTaGCGTGAGCTCGACAGGGCT +
Preference number: 2 (lower is better)
Translates to: ALGWVQLTPGVEGGSNGLAAIPG*RELDRA
Trigger: AGCCCTGTCGAGCTCACGGCAACCTGGGATGGCCGC...GAGGCCATTGCTGCCTCCCTCAACCCCCGGGGTCAACTGTACCCAGCCTAGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395698.7
3UTR-3UTR CCA 90 bp GGGCTGGGCCATGGAGGGGGCAGCGTAGGTCTGGAAGCGCTTGTGCGCTCGCTGGCAGTCTCAGGGACATaGTGTCCACGGCCATCTCCA +
Preference number: 2 (lower is better)
Translates to: GLGHGGGSVGLEALVRSLAVSGT*CPRPSP
Trigger: TGGAGATGGCCGTGGACACCATGTCCCTGAGACTGC...CAGCGAGCGCACAAGCGCTTCCAGACCTACGCTGCCCCCTCCATGGCCCAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395701.7
3UTR-3UTR TCA 90 bp CAGACACTCCCTCCTACCAGCCCGACTGCAGAGAGGCGCCTTGGCAACCGGCGGGCCAGCCCACTACTCTaGGGAGCATCAGTTCTGCTC +
Preference number: 2 (lower is better)
Translates to: QTLPPTSPTAERRLGNRRASPLL*GASVLL
Trigger: GAGCAGAACTGATGCTCCTCAGAGTAGTGGGCTGGC...CCGCCGGTTGCCAAGGCGCCTCTCTGCAGTCGGGCTGGTAGGAGGGAGTGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395698.7
3UTR-3UTR TCA 90 bp TGGCATGGGGGAAACGCCCGCTGGTTCCATGGGGGACATGCCCTCTGGCTCCAAGCCAGGACCTCACCCTaGCGGCTGTACAGGGGATTG +
Preference number: 2 (lower is better)
Translates to: WHGGNARWFHGGHALWLQARTSP*RLYRGL
Trigger: CAATCCCCTGTACAGCCGTCAGGGTGAGGTCCTGGC...TTGGAGCCAGAGGGCATGTCCCCCATGGAACCAGCGGGCGTTTCCCCCATGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000518394.5
3UTR-3UTR GCA 90 bp CGCCTTGGCAACCGGCGGCCATCCCAGGTTGCCGTGAGCTCGACAGGGCTCAAACCACTGTCCTCCTTGTaGAAGGTGACTCGGCCCCAG +
Preference number: 2 (lower is better)
Translates to: RLGNRRPSQVAVSSTGLKPLSSL*KVTRPQ
Trigger: CTGGGGCCGAGTCACCTTGCACAAGGAGGACAGTGG...TTTGAGCCCTGTCGAGCTCACGGCAACCTGGGATGGCCGCCGGTTGCCAAGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395698.7
3UTR-3UTR CCA 90 bp GCCATCCCAGGTTGCCGTGAGCTCGACAGGGCTCAAATCCTTGGACGCCAGCCCGGGCTGCAAGACAGGTaGGCTTCTGCCCCAGACCAG +
Preference number: 2 (lower is better)
Translates to: AIPGCRELDRAQILGRQPGLQDR*ASAPDQ
Trigger: CTGGTCTGGGGCAGAAGCCCACCTGTCTTGCAGCCC...GGGCTGGCGTCCAAGGATTTGAGCCCTGTCGAGCTCACGGCAACCTGGGATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395698.7
3UTR-3UTR CCA 90 bp CTGCAAATGCCTGTTAAGCCTGAACGTGGGCTGGGTCCTTCAGATGGGTGGCTGCGGGGCTGGACTCGGTaGGGCCTGGCTGGCCCTGAG +
Preference number: 2 (lower is better)
Translates to: LQMPVKPERGLGPSDGWLRGWTR*GLAGPE
Trigger: CTCAGGGCCAGCCAGGCCCCACCGAGTCCAGCCCCG...CAGCCACCCATCTGAAGGACCCAGCCCACGTTCAGGCTTAACAGGCATTTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR CAA 90 bp GAGAAGCTGGTGCAGGTGGTGCGGCAGCTGGAAGCAGAGCCTGGTTaGCCTCCAGTGCAGCCTGTCTTCATCACTGTGGACCCCGAGCGG +
Preference number: 2 (lower is better)
Translates to: EKLVQVVRQLEAEPG*PPVQPVFITVDPER
Trigger: CCGCTCGGGGTCCACAGTGATGAAGACAGGCTGCACTGGAGGCAAACCAGGCTCTGCTTCCAGCTGCCGCACCACCTGCACCAGCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR-3UTR TCA 90 bp GACGCCTGTGCTTGTTTCCAGGAGCATCAGATCCATGCTGCTGCTGACTCGGAGGGGCCTGGCTGGCCCTaGGGGCTGAGAAGGAGAGGC +
Preference number: 2 (lower is better)
Translates to: DACACFQEHQIHAAADSEGPGWP*GLRRRG
Trigger: GCCTCTCCTTCTCAGCCCTCAGGGCCAGCCAGGCCC...CTCCGAGTCAGCAGCAGCATGGATCTGATGCTCCTGGAAACAAGCACAGGCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR-3UTR CCA 90 bp GGCAACCCCATTGGCCCTGTCCTCCTGCACCGAAGAGAGCTGCTTGGCCCGCCTACGCAGGCAGAGCCCTaGATCAACAACGCTGCCTCA +
Preference number: 2 (lower is better)
Translates to: GNPIGPVLLHRRELLGPPTQAEP*INNAAS
Trigger: TGAGGCAGCGTTGTTGATCCAGGGCTCTGCCTGCGT...AGGCGGGCCAAGCAGCTCTCTTCGGTGCAGGAGGACAGGGCCAATGGGGTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
3UTR CAA 90 bp CAGTGCAGCCTGTCTTCATCACTGTGGACCCCGAGCGGGACGACGTaGAAGCCATGGCCCGCTACGTCCAGGACTTCCACCCAAGACTGT +
Preference number: 2 (lower is better)
Translates to: QCSLSSSLWTPSGTT*KPWPATSRTSTQDC
Trigger: ACAGTCTTGGGTGGAAGTCCTGGACGTAGCGGGCCATGGCTTCAACGTCGTCCCGCTCGGGGTCCACAGTGATGAAGACAGGCTGCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR-3UTR GCA 90 bp TGGGTCCTTCAGATGGGTGGCTGGTCTCAAGTCGCAGGGGCAGCCCAGGCACTGCGTGGACCACTCCATTaGCATCTACCTGCTCAACCC +
Preference number: 2 (lower is better)
Translates to: WVLQMGGWSQVAGAAQALRGPLH*HLPAQP
Trigger: GGGTTGAGCAGGTAGATGGCAATGGAGTGGTCCACG...CAGTGCCTGGGCTGCCCCTGCGACTTGAGACCAGCCACCCATCTGAAGGACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR-3UTR GCA 90 bp GAAACGCCCGCTGGTTCCATGGGGGACATGCCCTCTGGCTCCAACATGAAGGCCTGCACCGAAGAGAGCTaGTTGGCCCGCCTCTTTCCA +
Preference number: 2 (lower is better)
Translates to: ETPAGSMGDMPSGSNMKACTEES*LARLFP
Trigger: TGGAAAGAGGCGGGCCAAGCAGCTCTCTTCGGTGCA...GGCCTTCATGTTGGAGCCAGAGGGCATGTCCCCCATGGAACCAGCGGGCGTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518394.5
3UTR-3UTR CCA 90 bp GCCATCCCAGGTTGCCGTGAGCTCGACAGGGCTCAAATCCTTGGACGCCAGCCCGCTCTTCAAAAGGGCTaGTTGCAGGACGGGCTGCAA +
Preference number: 2 (lower is better)
Translates to: AIPGCRELDRAQILGRQPALQKG*LQDGLQ
Trigger: TTGCAGCCCGTCCTGCAACCAGCCCTTTTGAAGAGC...GGGCTGGCGTCCAAGGATTTGAGCCCTGTCGAGCTCACGGCAACCTGGGATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395698.7
3UTR CAA 90 bp AGACAGTGTGCGGCGGCACATGGCGGCTTTCCGCAGTGTCCTGTCTaGAGCCACTGCAGTCTGGGCCCCATCATTAAACGGGCTGCGTTT +
Preference number: 2 (lower is better)
Translates to: RQCAAAHGGFPQCPV*SHCSLGPIIKRAAF
Trigger: AAACGCAGCCCGTTTAATGATGGGGCCCAGACTGCAGTGGCTCAAGACAGGACACTGCGGAAAGCCGCCATGTGCCGCCGCACACTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR CAA 90 bp GTTGAAGCCATGGCCCGCTACGTCCAGGACTTCCACCCAAGACTGTaGGGTCTGACCGGCTCCACCAAACAGGTTGCCCAGGCTAGTCAC +
Preference number: 2 (lower is better)
Translates to: VEAMARYVQDFHPRL*GLTGSTKQVAQASH
Trigger: GTGACTAGCCTGGGCAACCTGTTTGGTGGAGCCGGTCAGACCCAACAGTCTTGGGTGGAAGTCCTGGACGTAGCGGGCCATGGCTTCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR CAA 90 bp GCAAGGCATGCACTTGGAATGCTTTCCGTCAGCAAGAGGTTCACCTaGCTGAGGTGCAGGTGCAGGGCAGGGTGCGGTGACAGGCTGGTG +
Preference number: 2 (lower is better)
Translates to: ARHALGMLSVSKRFT*LRCRCRAGCGDRLV
Trigger: CACCAGCCTGTCACCGCACCCTGCCCTGCACCTGCACCTCAGCAAGGTGAACCTCTTGCTGACGGAAAGCATTCCAAGTGCATGCCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR-3UTR GCA 90 bp AGCGGGACGACGTTGAAGCCATGGCCCGCTACGTCCAGGACTTCCACCCAAGACCCTGTCTTGAGCCACTaGAGTCTGGGCCCCATCATT +
Preference number: 2 (lower is better)
Translates to: SGTTLKPWPATSRTSTQDPVLSH*SLGPII
Trigger: AATGATGGGGCCCAGACTGCAGTGGCTCAAGACAGG...GTCTTGGGTGGAAGTCCTGGACGTAGCGGGCCATGGCTTCAACGTCGTCCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR-3UTR TCA 90 bp GAAACGCCCGCTGGTTCCATGGGGGACATGCCCTCTGGCTCCAACATGAAGGCCGGCCTGGTAGACGAGTaGGTAGAGGTATTCCACCTT +
Preference number: 2 (lower is better)
Translates to: ETPAGSMGDMPSGSNMKAGLVDE*VEVFHL
Trigger: AAGGTGGAATACCTCTACTCACTCGTCTACCAGGCC...GGCCTTCATGTTGGAGCCAGAGGGCATGTCCCCCATGGAACCAGCGGGCGTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518394.5
3UTR-3UTR GCA 90 bp CCATCCCAGGTTGCCGTGAGCTCGACAGGGCTCAAATCCTTGGACGCCAGCCCAGAGGAGCATCAGTTCTaGTCAGAGAGGGGAGGAACA +
Preference number: 2 (lower is better)
Translates to: PSQVAVSSTGLKSLDASPEEHQF*SERGGT
Trigger: TGTTCCTCCCCTCTCTGAGCAGAACTGATGCTCCTC...TGGGCTGGCGTCCAAGGATTTGAGCCCTGTCGAGCTCACGGCAACCTGGGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395698.7
3UTR-3UTR GCA 90 bp TCATCACTGTGGACCCCGAGCGGGACGACGTTGAAGCCATGGCCCGCTACGTCCATGAGATGGCAACACTaGTTTATTAGGCCGGGCCAG +
Preference number: 2 (lower is better)
Translates to: SSLWTPSGTTLKPWPATSMRWQH*FIRPGQ
Trigger: CTGGCCCGGCCTAATAAAGCAGTGTTGCCATCTCAT...GGACGTAGCGGGCCATGGCTTCAACGTCGTCCCGCTCGGGGTCCACAGTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR-3UTR CCA 90 bp CTGGCTCCTGACGCCTGTGCTTGTTTCCAGGAGCATCAGATCCATGCTGCTGCTGCTGGAAGCAGAGCCTaGTTTGCCTCCAGTGCAGCC +
Preference number: 2 (lower is better)
Translates to: LAPDACACFQEHQIHAAAAGSRA*FASSAA
Trigger: GGCTGCACTGGAGGCAAACCAGGCTCTGCTTCCAGC...AGCAGCAGCATGGATCTGATGCTCCTGGAAACAAGCACAGGCGTCAGGAGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR-3UTR CCA 90 bp GACGCCTGTGCTTGTTTCCAGGAGCATCAGATCCATGCTGCTGCTGACTCGGAGGACTTCCGGGGCCAGTaGGTGCTGATGTACTTTGGC +
Preference number: 2 (lower is better)
Translates to: DACACFQEHQIHAAADSEDFRGQ*VLMYFG
Trigger: GCCAAAGTACATCAGCACCCACTGGCCCCGGAAGTC...CTCCGAGTCAGCAGCAGCATGGATCTGATGCTCCTGGAAACAAGCACAGGCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR CAA 90 bp CAGGCCCCAAGGATGAGGACCAGGACTACATCGTGGACCACTCCATaGCCATCTACCTGCTCAACCCTGACGGCCTCTTCACGGATTACT +
Preference number: 2 (lower is better)
Translates to: QAPRMRTRTTSWTTP*PSTCSTLTASSRIT
Trigger: AGTAATCCGTGAAGAGGCCGTCAGGGTTGAGCAGGTAGATGGCAATGGAGTGGTCCACGATGTAGTCCTGGTCCTCATCCTTGGGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR-3UTR TCA 90 bp CAAATGCCTGTTAAGCCTGAACGTGGGCTGGGTCCTTCAGATGGGTGGCTGGTCATCTGTGTGTGTGTGTaGTCTGTACCAGCGGCCCAG +
Preference number: 2 (lower is better)
Translates to: QMPVKPERGLGPSDGWLVICVCV*SVPAAQ
Trigger: CTGGGCCGCTGGTACAGATCACACACACACACAGAT...GACCAGCCACCCATCTGAAGGACCCAGCCCACGTTCAGGCTTAACAGGCATTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR-3UTR CCA 90 bp CTCCAGTGCAGCCTGTCTTCATCACTGTGGACCCCGAGCGGGACGACGTTGAAGACCAGGACTACATCGTaGACCACTCCATTGCCATCT +
Preference number: 2 (lower is better)
Translates to: LQCSLSSSLWTPSGTTLKTRTTS*TTPLPS
Trigger: AGATGGCAATGGAGTGGTCCACGATGTAGTCCTGGT...CTTCAACGTCGTCCCGCTCGGGGTCCACAGTGATGAAGACAGGCTGCACTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR-3UTR CCA 90 bp GAGGACCTCACTGGGCGTCTGATCATTCTTGAGATCCACGTTAGTCCGGGAGTCACGCAGGCAGAGCCCTaGATCAACAACGCTGCCTCA +
Preference number: 2 (lower is better)
Translates to: EDLTGRLIILEIHVSPGVTQAEP*INNAAS
Trigger: TGAGGCAGCGTTGTTGATCCAGGGCTCTGCCTGCGT...GACTCCCGGACTAACGTGGATCTCAAGAATGATCAGACGCCCAGTGAGGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
3UTR-3UTR GCA 90 bp TCCACGTTAGTCCGGGAGTCAGGGAAGTCATCCAGCGACAGGAACTCATTCTCTTTGGCCCTGTCCTCCTaGACCGAAGAGAGCTGCTTG +
Preference number: 2 (lower is better)
Translates to: STLVRESGKSSSDRNSFSLALSS*TEESCL
Trigger: CAAGCAGCTCTCTTCGGTGCAGGAGGACAGGGCCAA...AGAGAATGAGTTCCTGTCGCTGGATGACTTCCCTGACTCCCGGACTAACGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
3UTR-3UTR CCA 90 bp CTCACTGGGCGTCTGATCATTCTTGAGATCCACGTTAGTCCGGGAGTCAGGGAACCGAAGAGAGCTGCTTaGCCCGCCTCTTTCCAGAGA +
Preference number: 2 (lower is better)
Translates to: LTGRLIILEIHVSPGVREPKRAA*PASFQR
Trigger: TCTCTGGAAAGAGGCGGGCCAAGCAGCTCTCTTCGG...TTCCCTGACTCCCGGACTAACGTGGATCTCAAGAATGATCAGACGCCCAGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
3UTR-3UTR TCA 90 bp CTTGAGATCCACGTTAGTCCGGGAGTCAGGGAAGTCATCCAGCGACAGGAACTCGCCTCTTTCCAGAGATaGAATCAAGGGCCTGGTAGA +
Preference number: 2 (lower is better)
Translates to: LEIHVSPGVREVIQRQELASFQR*NQGPGR
Trigger: TCTACCAGGCCCTTGATTTCATCTCTGGAAAGAGGC...GAGTTCCTGTCGCTGGATGACTTCCCTGACTCCCGGACTAACGTGGATCTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
3UTR-3UTR GCA 90 bp ACTACTCTGAGGAGCATCAGTTCTGCTCAGAGAGGGGAGGAACACAGAAGCTGCTTCAAAAGGGCTGGTTaGAGGACGGGCTGCAAGACA +
Preference number: 2 (lower is better)
Translates to: TTLRSISSAQRGEEHRSCFKRAG*RTGCKT
Trigger: TGTCTTGCAGCCCGTCCTGCAACCAGCCCTTTTGAA...GCAGCTTCTGTGTTCCTCCCCTCTCTGAGCAGAACTGATGCTCCTCAGAGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395698.7
3UTR-3UTR TCA 90 bp TTAGTCCGGGAGTCAGGGAAGTCATCCAGCGACAGGAACTCATTCTCTGCCTCCACAACGCTGCCTCAATaGAGTTCATTGTGGTCTTGC +
Preference number: 2 (lower is better)
Translates to: LVRESGKSSSDRNSFSASTTLPQ*SSLWSC
Trigger: GCAAGACCACAATGAACTTCATTGAGGCAGCGTTGT...GGAGGCAGAGAATGAGTTCCTGTCGCTGGATGACTTCCCTGACTCCCGGACTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
3UTR-3UTR TCA 90 bp CTCACTGGGCGTCTGATCATTCTTGAGATCCACGTTAGTCCGGGAGTCAGGGAAGCCTCTTTCCAGAGATaGAATCAAGGGCCTGGTAGA +
Preference number: 2 (lower is better)
Translates to: LTGRLIILEIHVSPGVREASFQR*NQGPGR
Trigger: TCTACCAGGCCCTTGATTTCATCTCTGGAAAGAGGC...TTCCCTGACTCCCGGACTAACGTGGATCTCAAGAATGATCAGACGCCCAGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
3UTR-3UTR TCA 90 bp CAGGCTAGTCACAGTTACCGCGTGTACTACAATGCAGGCCCCAAGGATGAGGACTTTTTAGGGGGAAGATaGGATGGCAACACTGCTTTA +
Preference number: 2 (lower is better)
Translates to: QASHSYRVYYNAGPKDEDFLGGR*DGNTAL
Trigger: TAAAGCAGTGTTGCCATCTCATCTTCCCCCTAAAAA...GTCCTCATCCTTGGGGCCTGCATTGTAGTACACGCGGTAACTGTGACTAGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR-3UTR GCA 90 bp GAGGACCTCACTGGGCGTCTGATCATTCTTGAGATCCACGTTAGTCCGGGAGTCCTGGATCAACAACGCTaGCTCAATGAAGTTCATTGT +
Preference number: 2 (lower is better)
Translates to: EDLTGRLIILEIHVSPGVLDQQR*LNEVHC
Trigger: ACAATGAACTTCATTGAGGCAGCGTTGTTGATCCAG...GACTCCCGGACTAACGTGGATCTCAAGAATGATCAGACGCCCAGTGAGGTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
3UTR TCA 72 bp GCCAGCCCCAGGGCCCTGGGCTTCGAACCCGGCTGCTaGTCACAGGCCTGTTCGGGGCTGGACTCGGTGGGG +
Preference number: 3 (lower is better)
Translates to: ASPRALGFEPGC*SQACSGLDSVG
Trigger: CCCCACCGAGTCCAGCCCCGAACAGGCCTGTGATCAGCAGCCGGGTTCGAAGCCCAGGGCCCTGGGGCTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR GCA 72 bp TGCGCCAGGCAGCTGTGGGCCAGGGCGACTTCCACCTaGTGGATCACAGAGGCCGGGCTCGCTGCAAGGCTG +
Preference number: 3 (lower is better)
Translates to: CARQLWARATST*WITEAGLAARL
Trigger: CAGCCTTGCAGCGAGCCCGGCCTCTGTGATCCAGCAGGTGGAAGTCGCCCTGGCCCACAGCTGCCTGGCGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR TCA 72 bp GGCGCCTTGGCAACCGGCGGCCATCCCAGGTTGCCGTaGGCTCGACAGGGCTCAAATCCTTGGACGCCAGCC +
Preference number: 3 (lower is better)
Translates to: GALATGGHPRLP*ARQGSNPWTPA
Trigger: GGCTGGCGTCCAAGGATTTGAGCCCTGTCGAGCTCACGGCAACCTGGGATGGCCGCCGGTTGCCAAGGCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395698.7
3UTR CCA 72 bp ACTCCCTCCTACCAGCCCGACTGCAGAGAGGCGCCTTaGCAACCGGCGGCCATCCCAGGTTGCCGTGAGCTC +
Preference number: 3 (lower is better)
Translates to: TPSYQPDCREAP*QPAAIPGCREL
Trigger: GAGCTCACGGCAACCTGGGATGGCCGCCGGTTGCCAAGGCGCCTCTCTGCAGTCGGGCTGGTAGGAGGGAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395698.7
3UTR CCA 72 bp GCCAGGCAGCTGTGGGCCAGGGCGACTTCCACCTGCTaGATCACAGAGGCCGGGCTCGCTGCAAGGCTGACT +
Preference number: 3 (lower is better)
Translates to: ARQLWARATSTC*ITEAGLAARLT
Trigger: AGTCAGCCTTGCAGCGAGCCCGGCCTCTGTGATCCAGCAGGTGGAAGTCGCCCTGGCCCACAGCTGCCTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR GCA 72 bp CTGGTTGCAGGACGGGCTGCAAGACAGGTGGGCTTCTaGCCCAGACCAGTGGTCTGGGGCCAAGGCCATACC +
Preference number: 3 (lower is better)
Translates to: LVAGRAARQVGF*PRPVVWGQGHT
Trigger: GGTATGGCCTTGGCCCCAGACCACTGGTCTGGGGCAGAAGCCCACCTGTCTTGCAGCCCGTCCTGCAACCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395698.7
3UTR GCA 72 bp AGAGAGGCGCCTTGGCAACCGGCGGCCATCCCAGGTTaGCGTGAGCTCGACAGGGCTCAAATCCTTGGACGC +
Preference number: 3 (lower is better)
Translates to: REAPWQPAAIPG*RELDRAQILGR
Trigger: GCGTCCAAGGATTTGAGCCCTGTCGAGCTCACGGCAACCTGGGATGGCCGCCGGTTGCCAAGGCGCCTCTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395698.7
3UTR GCA 72 bp GACTTCCACCTGCTGGATCACAGAGGCCGGGCTCGCTaGAAGGCTGACTTCCGGGGCCAGTGGGTGCTGATG +
Preference number: 3 (lower is better)
Translates to: DFHLLDHRGRAR*KADFRGQWVLM
Trigger: CATCAGCACCCACTGGCCCCGGAAGTCAGCCTTGCAGCGAGCCCGGCCTCTGTGATCCAGCAGGTGGAAGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR GCA 72 bp ACCCCGGAGCTGGCAACCCCATTGGCCCTGTCCTCCTaGACCGAAGAGAGCTGCTTGGCCCGCCTCTTTCCA +
Preference number: 3 (lower is better)
Translates to: TPELATPLALSS*TEESCLARLFP
Trigger: TGGAAAGAGGCGGGCCAAGCAGCTCTCTTCGGTGCAGGAGGACAGGGCCAATGGGGTTGCCAGCTCCGGGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
3UTR CCA 72 bp AGCCTGAACGTGGGCTGGGTCCTTCAGATGGGTGGCTaGTCTCAAGTCGCAGGGGCAGCCCAGGCACTGTCC +
Preference number: 3 (lower is better)
Translates to: SLNVGWVLQMGG*SQVAGAAQALS
Trigger: GGACAGTGCCTGGGCTGCCCCTGCGACTTGAGACCAGCCACCCATCTGAAGGACCCAGCCCACGTTCAGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR-3UTR CAA 90 bp GAGCATCAGATCCATGCTGCTGCTGACTCGGAGCCCCACAGCTTGGCACAGGCTCCGAGCGGGACGACGTaGAAGCCATGGCCCGCTACG +
Preference number: 3 (lower is better)
Translates to: EHQIHAAADSEPHSLAQAPSGTT*KPWPAT
Trigger: CGTAGCGGGCCATGGCTTCAACGTCGTCCCGCTCGG...AGCCTGTGCCAAGCTGTGGGGCTCCGAGTCAGCAGCAGCATGGATCTGATGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR TCA 72 bp GGTGCAGGTGCAGGGCAGGGTGCGGTGACAGGCTGGTaGTCCCAGGTAGAGGACAGGAGTGACAGGTGTGGT +
Preference number: 3 (lower is better)
Translates to: GAGAGQGAVTGW*SQVEDRSDRCG
Trigger: ACCACACCTGTCACTCCTGTCCTCTACCTGGGATCACCAGCCTGTCACCGCACCCTGCCCTGCACCTGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR GCA 72 bp GCCGGAGCAGATCGGCTGAGCAGATCTCAGACAGTGTaGGGCGGCACATGGCGGCTTTCCGCAGTGTCCTGT +
Preference number: 3 (lower is better)
Translates to: AGADRLSRSQTV*GGTWRLSAVSC
Trigger: ACAGGACACTGCGGAAAGCCGCCATGTGCCGCCGCACACTGTCTGAGATCTGCTCAGCCGATCTGCTCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR-3UTR CAA 90 bp CCAGTGCAGCCTGTCTTCATCACTGTGGACCCCGAGCGGGACGACGTTGAAGCCCCGCAGTGTCCTGTCTaGAGCCACTGCAGTCTGGGC +
Preference number: 3 (lower is better)
Translates to: PVQPVFITVDPERDDVEAPQCPV*SHCSLG
Trigger: GCCCAGACTGCAGTGGCTCAAGACAGGACACTGCGG...GGCTTCAACGTCGTCCCGCTCGGGGTCCACAGTGATGAAGACAGGCTGCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR-3UTR CAA 90 bp GTCAGCAAGAGGTTCACCTTGCTGAGGTGCAGGTGCAGGGCAGGGTGCGGTGACGAAGCAGAGCCTGGTTaGCCTCCAGTGCAGCCTGTC +
Preference number: 3 (lower is better)
Translates to: VSKRFTLLRCRCRAGCGDEAEPG*PPVQPV
Trigger: GACAGGCTGCACTGGAGGCAAACCAGGCTCTGCTTC...GTCACCGCACCCTGCCCTGCACCTGCACCTCAGCAAGGTGAACCTCTTGCTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR TCA 72 bp CGTAGGTCTGGAAGCGCTTGTGCGCTCGCTGGTGCGTaGGCAGTCTCAGGGACATGGTGTCCACGGCCATCT +
Preference number: 3 (lower is better)
Translates to: RRSGSACALAGA*AVSGTWCPRPS
Trigger: AGATGGCCGTGGACACCATGTCCCTGAGACTGCTCACGCACCAGCGAGCGCACAAGCGCTTCCAGACCTACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395701.7
3UTR TCA 72 bp CGGCGGCACATGGCGGCTTTCCGCAGTGTCCTGTCTTaGGCCACTGCAGTCTGGGCCCCATCATTAAACGGG +
Preference number: 3 (lower is better)
Translates to: RRHMAAFRSVLS*ATAVWAPSLNG
Trigger: CCCGTTTAATGATGGGGCCCAGACTGCAGTGGCTCAAGACAGGACACTGCGGAAAGCCGCCATGTGCCGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR TCA 72 bp TGTCTTCATCACTGTGGACCCCGAGCGGGACGACGTTaGAGCCATGGCCCGCTACGTCCAGGACTTCCACCC +
Preference number: 3 (lower is better)
Translates to: CLHHCGPRAGRR*SHGPLRPGLPP
Trigger: GGGTGGAAGTCCTGGACGTAGCGGGCCATGGCTTCAACGTCGTCCCGCTCGGGGTCCACAGTGATGAAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR CCA 72 bp CGGCTGAGCAGATCTCAGACAGTGTGCGGCGGCACATaGCGGCTTTCCGCAGTGTCCTGTCTTGAGCCACTG +
Preference number: 3 (lower is better)
Translates to: RLSRSQTVCGGT*RLSAVSCLEPL
Trigger: CAGTGGCTCAAGACAGGACACTGCGGAAAGCCGCCATGTGCCGCCGCACACTGTCTGAGATCTGCTCAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR CCA 72 bp TCACTGTGGACCCCGAGCGGGACGACGTTGAAGCCATaGCCCGCTACGTCCAGGACTTCCACCCAAGACTGT +
Preference number: 3 (lower is better)
Translates to: SLWTPSGTTLKP*PATSRTSTQDC
Trigger: ACAGTCTTGGGTGGAAGTCCTGGACGTAGCGGGCCATGGCTTCAACGTCGTCCCGCTCGGGGTCCACAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR CCA 72 bp AGCAAAAGCGAACAGAAGCCCTGCGCCAGGCAGCTGTaGGCCAGGGCGACTTCCACCTGCTGGATCACAGAG +
Preference number: 3 (lower is better)
Translates to: SKSEQKPCARQL*ARATSTCWITE
Trigger: CTCTGTGATCCAGCAGGTGGAAGTCGCCCTGGCCCACAGCTGCCTGGCGCAGGGCTTCTGTTCGCTTTTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR CCA 72 bp GTTAAGCCTGAACGTGGGCTGGGTCCTTCAGATGGGTaGCTGGTCTCAAGTCGCAGGGGCAGCCCAGGCACT +
Preference number: 3 (lower is better)
Translates to: VKPERGLGPSDG*LVSSRRGSPGT
Trigger: AGTGCCTGGGCTGCCCCTGCGACTTGAGACCAGCCACCCATCTGAAGGACCCAGCCCACGTTCAGGCTTAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR-3UTR CAA 90 bp CCATCCCAGGTTGCCGTGAGCTCGACAGGGCTCAAATCCTTGGACGCCAGCCCAATACCACTGTCCTCCTaGTGCAAGGTGACTCGGCCC +
Preference number: 3 (lower is better)
Translates to: PSQVAVSSTGLKSLDASPIPLSS*CKVTRP
Trigger: GGGCCGAGTCACCTTGCACAAGGAGGACAGTGGTAT...TGGGCTGGCGTCCAAGGATTTGAGCCCTGTCGAGCTCACGGCAACCTGGGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395698.7
3UTR TCA 72 bp CCTCTTCACGGATTACTACGGCCGGAGCAGATCGGCTaGGCAGATCTCAGACAGTGTGCGGCGGCACATGGC +
Preference number: 3 (lower is better)
Translates to: PLHGLLRPEQIG*ADLRQCAAAHG
Trigger: GCCATGTGCCGCCGCACACTGTCTGAGATCTGCTCAGCCGATCTGCTCCGGCCGTAGTAATCCGTGAAGAGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR-3UTR CAA 90 bp CTTGAGATCCACGTTAGTCCGGGAGTCAGGGAAGTCATCCAGCGACAGGAACTCGAGCTGGCAACCCCATaGGCCCTGTCCTCCTGCACC +
Preference number: 3 (lower is better)
Translates to: LEIHVSPGVREVIQRQELELATP*ALSSCT
Trigger: GGTGCAGGAGGACAGGGCCAATGGGGTTGCCAGCTC...GAGTTCCTGTCGCTGGATGACTTCCCTGACTCCCGGACTAACGTGGATCTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
3UTR TCA 72 bp CGTGGACCACTCCATTGCCATCTACCTGCTCAACCCTaGCGGCCTCTTCACGGATTACTACGGCCGGAGCAG +
Preference number: 3 (lower is better)
Translates to: RGPLHCHLPAQP*RPLHGLLRPEQ
Trigger: CTGCTCCGGCCGTAGTAATCCGTGAAGAGGCCGTCAGGGTTGAGCAGGTAGATGGCAATGGAGTGGTCCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR TCA 72 bp GCTACGTCCAGGACTTCCACCCAAGACTGTTGGGTCTaGCCGGCTCCACCAAACAGGTTGCCCAGGCTAGTC +
Preference number: 3 (lower is better)
Translates to: ATSRTSTQDCWV*PAPPNRLPRLV
Trigger: GACTAGCCTGGGCAACCTGTTTGGTGGAGCCGGTCAGACCCAACAGTCTTGGGTGGAAGTCCTGGACGTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR GCA 72 bp AAGCTGCTCTTCAAAAGGGCTGGTTGCAGGACGGGCTaGAAGACAGGTGGGCTTCTGCCCCAGACCAGTGGT +
Preference number: 3 (lower is better)
Translates to: KLLFKRAGCRTG*KTGGLLPQTSG
Trigger: ACCACTGGTCTGGGGCAGAAGCCCACCTGTCTTGCAGCCCGTCCTGCAACCAGCCCTTTTGAAGAGCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395698.7
3UTR-3UTR CAA 90 bp TTAGTCCGGGAGTCAGGGAAGTCATCCAGCGACAGGAACTCATTCTCTGCCTCCACCGAAGAGAGCTGCTaGGCCCGCCTCTTTCCAGAG +
Preference number: 3 (lower is better)
Translates to: LVRESGKSSSDRNSFSASTEESC*ARLFPE
Trigger: CTCTGGAAAGAGGCGGGCCAAGCAGCTCTCTTCGGT...GGAGGCAGAGAATGAGTTCCTGTCGCTGGATGACTTCCCTGACTCCCGGACTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
3UTR GCA 72 bp CATGGCGGCTTTCCGCAGTGTCCTGTCTTGAGCCACTaGAGTCTGGGCCCCATCATTAAACGGGCTGCGTTT +
Preference number: 3 (lower is better)
Translates to: HGGFPQCPVLSH*SLGPIIKRAAF
Trigger: AAACGCAGCCCGTTTAATGATGGGGCCCAGACTGCAGTGGCTCAAGACAGGACACTGCGGAAAGCCGCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR TCA 72 bp ACAGGGCTCAAATCCTTGGACGCCAGCCCACTACTCTaGGGAGCATCAGTTCTGCTCAGAGAGGGGAGGAAC +
Preference number: 3 (lower is better)
Translates to: TGLKSLDASPLL*GASVLLREGRN
Trigger: GTTCCTCCCCTCTCTGAGCAGAACTGATGCTCCTCAGAGTAGTGGGCTGGCGTCCAAGGATTTGAGCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395698.7
3UTR CCA 72 bp ATGCAGGCCCCAAGGATGAGGACCAGGACTACATCGTaGACCACTCCATTGCCATCTACCTGCTCAACCCTG +
Preference number: 3 (lower is better)
Translates to: MQAPRMRTRTTS*TTPLPSTCSTL
Trigger: CAGGGTTGAGCAGGTAGATGGCAATGGAGTGGTCCACGATGTAGTCCTGGTCCTCATCCTTGGGGCCTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR CCA 72 bp AGCAGCTGCAAATGCCTGTTAAGCCTGAACGTGGGCTaGGTCCTTCAGATGGGTGGCTGGTCTCAAGTCGCA +
Preference number: 3 (lower is better)
Translates to: SSCKCLLSLNVG*VLQMGGWSQVA
Trigger: TGCGACTTGAGACCAGCCACCCATCTGAAGGACCCAGCCCACGTTCAGGCTTAACAGGCATTTGCAGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR GCA 72 bp AGGACTACATCGTGGACCACTCCATTGCCATCTACCTaGTCAACCCTGACGGCCTCTTCACGGATTACTACG +
Preference number: 3 (lower is better)
Translates to: RTTSWTTPLPST*STLTASSRITT
Trigger: CGTAGTAATCCGTGAAGAGGCCGTCAGGGTTGAGCAGGTAGATGGCAATGGAGTGGTCCACGATGTAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR TCA 72 bp CTTTCCAGAGATGAAATCAAGGGCCTGGTAGACGAGTaGGTAGAGGTATTCCACCTTCTTACTGTAGACGCA +
Preference number: 3 (lower is better)
Translates to: LSRDEIKGLVDE*VEVFHLLTVDA
Trigger: TGCGTCTACAGTAAGAAGGTGGAATACCTCTACTCACTCGTCTACCAGGCCCTTGATTTCATCTCTGGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
3UTR GCA 72 bp TTGCAAATAGATAACGTGGTTAGTTCAGGCAAGGCATaGACTTGGAATGCTTTCCGTCAGCAAGAGGTTCAC +
Preference number: 3 (lower is better)
Translates to: LQIDNVVSSGKA*TWNAFRQQEVH
Trigger: GTGAACCTCTTGCTGACGGAAAGCATTCCAAGTGCATGCCTTGCCTGAACTAACCACGTTATCTATTTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CCA 90 bp GGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCGCCTCGGGTCCTCCCTaGGACCCTGGGAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GRASQEQTHGSSVHIPPPASGPP*DPGRPG
Trigger: GCCTGGCCTCCCAGGGTCCCAGGGAGGACCCGAGGC...GGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR GCA 90 bp CGGCTGCTGATCACAGGCCTGTTCGGGGCTGGACTCGGTGGGGCCTGGCTGGCCAGCGAACAGAAGCCCTaGGCCAGGCAGCTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: RLLITGLFGAGLGGAWLASEQKP*ARQLWA
Trigger: GGCCCACAGCTGCCTGGCGCAGGGCTTCTGTTCGCT...GGCCAGCCAGGCCCCACCGAGTCCAGCCCCGAACAGGCCTGTGATCAGCAGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CCA 90 bp GGGCCATGGAGGGGGCAGCGTAGGTCTGGAAGCGCTTGTGCGCTCGCTGGTGCGGGTCAGCGGCTTCCCTaGGGTCTGCTCCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: GPWRGQRRSGSACALAGAGQRLP*GLLPRA
Trigger: AGCCCGAGGGAGCAGACCCCAGGGAAGCCGCTGACC...CGCACCAGCGAGCGCACAAGCGCTTCCAGACCTACGCTGCCCCCTCCATGGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395701.7
CDS-3UTR GCA 90 bp ACTCCCTCCTACCAGCCCGACTGCAGAGAGGCGCCTTGGCAACCGGCGGCCATCAAGGGACCGCAGGGCTaGCTTCCGAGGGGTACGGCG +
Preference number: 4 (lower is better)
Translates to: TPSYQPDCREAPWQPAAIKGPQG*LPRGTA
Trigger: CGCCGTACCCCTCGGAAGGCAGCCCTGCGGTCCCTT...GATGGCCGCCGGTTGCCAAGGCGCCTCTCTGCAGTCGGGCTGGTAGGAGGGAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR GCA 90 bp GGGCCATGGAGGGGGCAGCGTAGGTCTGGAAGCGCTTGTGCGCTCGCTGGTGCGAGGTCGCGGATGGGCTaGAAGAGGTGGGCGAAGCGC +
Preference number: 4 (lower is better)
Translates to: GPWRGQRRSGSACALAGARSRMG*KRWAKR
Trigger: GCGCTTCGCCCACCTCTTGCAGCCCATCCGCGACCT...CGCACCAGCGAGCGCACAAGCGCTTCCAGACCTACGCTGCCCCCTCCATGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395701.7
CDS-3UTR CCA 90 bp CAGACACTCCCTCCTACCAGCCCGACTGCAGAGAGGCGCCTTGGCAACCGGCGGGCTCCAGAGCGGCCTTaGGGGCCGAGGCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: QTLPPTSPTAERRLGNRRAPERP*GPRPQE
Trigger: TTCCTGAGGCCTCGGCCCCCAAGGCCGCTCTGGAGC...CCGCCGGTTGCCAAGGCGCCTCTCTGCAGTCGGGCTGGTAGGAGGGAGTGTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CCA 90 bp GCTTCGAACCCGGCTGCTGATCACAGGCCTGTTCGGGGCTGGACTCGGTGGGGCGGTCAGCGGCTTCCCTaGGGTCTGCTCCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: ASNPAADHRPVRGWTRWGGQRLP*GLLPRA
Trigger: AGCCCGAGGGAGCAGACCCCAGGGAAGCCGCTGACC...GCCCCACCGAGTCCAGCCCCGAACAGGCCTGTGATCAGCAGCCGGGTTCGAAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CCA 90 bp CTCAGGGCTGGGCCATGGAGGGGGCAGCGTAGGTCTGGAAGCGCTTGTGCGCTCACCTCGAAGGCCGGCTaGCCAGCCACCAGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: LRAGPWRGQRRSGSACALTSKAG*PATSSA
Trigger: TGCGGAGCTGGTGGCTGGCCAGCCGGCCTTCGAGGT...GAGCGCACAAGCGCTTCCAGACCTACGCTGCCCCCTCCATGGCCCAGCCCTGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395701.7
CDS-3UTR CCA 90 bp CAGACACTCCCTCCTACCAGCCCGACTGCAGAGAGGCGCCTTGGCAACCGGCGGCTGCAGGCCTCCATGTaGGTCCCACCTGCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: QTLPPTSPTAERRLGNRRLQASM*VPPAAG
Trigger: GCCCGCAGCAGGTGGGACCCACATGGAGGCCTGCAG...CCGCCGGTTGCCAAGGCGCCTCTCTGCAGTCGGGCTGGTAGGAGGGAGTGTCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CCA 90 bp CAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTCGCGGGGCTGGACTCGGTaGGGCCTGGCTGGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: QPGADTRLLSTHSPTPASRGWTR*GLAGPE
Trigger: CTCAGGGCCAGCCAGGCCCCACCGAGTCCAGCCCCG...CGAGGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR TCA 90 bp AGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTCGGGGGCCTGGCTGGCCCTaGGGGCTGAGAAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: SQEQTHGSSVHIPPPLPRGPGWP*GLRRRG
Trigger: GCCTCTCCTTCTCAGCCCTCAGGGCCAGCCAGGCCC...CCGAGGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR GCA 90 bp AGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCAAGGGACCGCAGGGCTaGCTTCCGAGGGGTACGGCG +
Preference number: 4 (lower is better)
Translates to: RPGQPGADTRLLSTHSPTKGPQG*LPRGTA
Trigger: CGCCGTACCCCTCGGAAGGCAGCCCTGCGGTCCCTT...GGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp GCAGAGAGGCGCCTTGGCAACCGGCGGCCATCCCAGGTTGCCGTGAGCTCGACAAGGTCGCGGATGGGCTaGAAGAGGTGGGCGAAGCGC +
Preference number: 4 (lower is better)
Translates to: AERRLGNRRPSQVAVSSTRSRMG*KRWAKR
Trigger: GCGCTTCGCCCACCTCTTGCAGCCCATCCGCGACCT...TGTCGAGCTCACGGCAACCTGGGATGGCCGCCGGTTGCCAAGGCGCCTCTCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CCA 90 bp GGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCATGGGCTGCAAGAGGTaGGCGAAGCGCGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: GRASQEQTHGSSVHIPPPMGCKR*AKRAST
Trigger: CGTGGAGGCGCGCTTCGCCCACCTCTTGCAGCCCAT...GGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp GCAGAGAGGCGCCTTGGCAACCGGCGGCCATCCCAGGTTGCCGTGAGCTCGACAGGGGGAAACGCCCGCTaGTTCCATGGGGGACATGCC +
Preference number: 4 (lower is better)
Translates to: AERRLGNRRPSQVAVSSTGGNAR*FHGGHA
Trigger: GGCATGTCCCCCATGGAACCAGCGGGCGTTTCCCCC...TGTCGAGCTCACGGCAACCTGGGATGGCCGCCGGTTGCCAAGGCGCCTCTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CCA 90 bp GCTTCGAACCCGGCTGCTGATCACAGGCCTGTTCGGGGCTGGACTCGGTGGGGCGGGGGAAACGCCCGCTaGTTCCATGGGGGACATGCC +
Preference number: 4 (lower is better)
Translates to: ASNPAADHRPVRGWTRWGGGNAR*FHGGHA
Trigger: GGCATGTCCCCCATGGAACCAGCGGGCGTTTCCCCC...GCCCCACCGAGTCCAGCCCCGAACAGGCCTGTGATCAGCAGCCGGGTTCGAAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CCA 90 bp TGGTGCGTGAGCAGTCTCAGGGACATGGTGTCCACGGCCATCTCCAGCCCGGGCGCTCCAGAGCGGCCTTaGGGGCCGAGGCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: WCVSSLRDMVSTAISSPGAPERP*GPRPQE
Trigger: TTCCTGAGGCCTCGGCCCCCAAGGCCGCTCTGGAGC...GCCCGGGCTGGAGATGGCCGTGGACACCATGTCCCTGAGACTGCTCACGCACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395701.7
CDS-3UTR CCA 90 bp AGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCGGTCAGCGGCTTCCCTaGGGTCTGCTCCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: RPGQPGADTRLLSTHSPTGQRLP*GLLPRA
Trigger: AGCCCGAGGGAGCAGACCCCAGGGAAGCCGCTGACC...GGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR CCA 90 bp CCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTACCTCGAAGGCCGGCTaGCCAGCCACCAGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: PGQPGADTRLLSTHSPTPTSKAG*PATSSA
Trigger: TGCGGAGCTGGTGGCTGGCCAGCCGGCCTTCGAGGT...AGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR CCA 90 bp CTCAGGGCTGGGCCATGGAGGGGGCAGCGTAGGTCTGGAAGCGCTTGTGCGCTCCTCAGGGCTGGGCCATaGAGGGGGCAGCGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: LRAGPWRGQRRSGSACALLRAGP*RGQRRS
Trigger: AGACCTACGCTGCCCCCTCCATGGCCCAGCCCTGAG...GAGCGCACAAGCGCTTCCAGACCTACGCTGCCCCCTCCATGGCCCAGCCCTGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395701.7
CDS-3UTR CCA 90 bp CTGGGTCCCTGGCATGGGGGAAACGCCCGCTGGTTCCATGGGGGACATGCCCTCTCTGATCCAGCCAGCTaGGCCGCCACGTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: LGPWHGGNARWFHGGHALSDPAS*AATSTS
Trigger: GGAGGTGGACGTGGCGGCCCAGCTGGCTGGATCAGA...GAGGGCATGTCCCCCATGGAACCAGCGGGCGTTTCCCCCATGCCAGGGACCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000518394.5
CDS-3UTR GCA 90 bp CAGACACTCCCTCCTACCAGCCCGACTGCAGAGAGGCGCCTTGGCAACCGGCGGCTGGGAGAAGCCGAGTaGTGGGACAGGGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: QTLPPTSPTAERRLGNRRLGEAE*WDRAPA
Trigger: TGCAGGAGCCCTGTCCCAGCACTCGGCTTCTCCCAG...CCGCCGGTTGCCAAGGCGCCTCTCTGCAGTCGGGCTGGTAGGAGGGAGTGTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR GCA 90 bp ACTGCAGAGAGGCGCCTTGGCAACCGGCGGCCATCCCAGGTTGCCGTGAGCTCGCTCTACTGCCTCCTCTaGATCCTCGTCCTCGCCCCC +
Preference number: 4 (lower is better)
Translates to: TAERRLGNRRPSQVAVSSLYCLL*ILVLAP
Trigger: GGGGGCGAGGACGAGGATGCAGAGGAGGCAGTAGAG...CGAGCTCACGGCAACCTGGGATGGCCGCCGGTTGCCAAGGCGCCTCTCTGCAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR GCA 90 bp GGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTCCTTCACGCAGGATaGAGGCTCTGGGGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: GPARSRHTAPQYTFPHPCLLHAG*RLWGPL
Trigger: GAGGGGGCCCCAGAGCCTGCATCCTGCGTGAAGGAG...GCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp AGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTCGGGCAGGCCGCAGCCACTaGTCAGCCACCTCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SQEQTHGSSVHIPPPLPRAGRSH*SATSLL
Trigger: GAGGAGGGAGGTGGCTGAGCAGTGGCTGCGGCCTGC...CCGAGGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp GCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCGGCTTCCCTGGGGTCTaGTCCCTCGGGCTCCATGTA +
Preference number: 4 (lower is better)
Translates to: AGPARSRHTAPQYTFPHPGFPGV*SLGLHV
Trigger: TACATGGAGCCCGAGGGAGCAGACCCCAGGGAAGCC...GGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp TCCAGACACTCCCTCCTACCAGCCCGACTGCAGAGAGGCGCCTTGGCAACCGGCGTGGGTCCCACCTGCTaGGGGCTCCTGGACTCCTTG +
Preference number: 4 (lower is better)
Translates to: SRHSLLPARLQRGALATGVGPTC*GLLDSL
Trigger: CAAGGAGTCCAGGAGCCCGCAGCAGGTGGGACCCAC...GCCGGTTGCCAAGGCGCCTCTCTGCAGTCGGGCTGGTAGGAGGGAGTGTCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CCA 90 bp TCCAGACACTCCCTCCTACCAGCCCGACTGCAGAGAGGCGCCTTGGCAACCGGCAGATACTCGCCCAGCTaGGCCGCCACGTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: SRHSLLPARLQRGALATGRYSPS*AATSTS
Trigger: GGAGGTGGACGTGGCGGCCCAGCTGGGCGAGTATCT...GCCGGTTGCCAAGGCGCCTCTCTGCAGTCGGGCTGGTAGGAGGGAGTGTCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CCA 90 bp CGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCGCCCGCTGGTTCCATaGGGGACATGCCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: RASQEQTHGSSVHIPPPLRPLVP*GTCPLA
Trigger: AGCCAGAGGGCATGTCCCCCATGGAACCAGCGGGCG...CAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp CATGGAGGGGGCAGCGTAGGTCTGGAAGCGCTTGTGCGCTCGCTGGTGCGTGAGGTCCTTCTGGGTCCCTaGCATGGGGGAAACGCCCGC +
Preference number: 4 (lower is better)
Translates to: HGGGSVGLEALVRSLVREVLLGP*HGGNAR
Trigger: GCGGGCGTTTCCCCCATGCCAGGGACCCAGAAGGAC...CTCACGCACCAGCGAGCGCACAAGCGCTTCCAGACCTACGCTGCCCCCTCCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395701.7
CDS-3UTR CCA 90 bp CCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGTCCTTCTGGGTCCCTaGCATGGGGGAAACGCCCGC +
Preference number: 4 (lower is better)
Translates to: PGQPGADTRLLSTHSPTPVLLGP*HGGNAR
Trigger: GCGGGCGTTTCCCCCATGCCAGGGACCCAGAAGGAC...AGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp GGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTCCCGGTGTCCTTCTaGGTCCCTGGCATGGGGGAA +
Preference number: 4 (lower is better)
Translates to: GRASQEQTHGSSVHIPPPLPVSF*VPGMGE
Trigger: TTCCCCCATGCCAGGGACCCAGAAGGACACCGGGAG...GGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp GGGGCCAAGGCCATACCACTGTCCTCCTTGTGCAAGGTGACTCGGCCCCAGAGCGGGCATCGGGCCTTCTaGAGAGGGGCCTGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: GAKAIPLSSLCKVTRPQSGHRAF*RGAWLL
Trigger: CAGGAGCCAGGCCCCTCTCCAGAAGGCCCGATGCCC...GCTCTGGGGCCGAGTCACCTTGCACAAGGAGGACAGTGGTATGGCCTTGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CCA 90 bp GGAGGGGGCAGCGTAGGTCTGGAAGCGCTTGTGCGCTCGCTGGTGCGTGAGCAGCGCTTGTGCGCTCGCTaGTGCGTGAGCAGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: GGGSVGLEALVRSLVREQRLCAR*CVSSLR
Trigger: CCTGAGACTGCTCACGCACCAGCGAGCGCACAAGCG...CTGCTCACGCACCAGCGAGCGCACAAGCGCTTCCAGACCTACGCTGCCCCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395701.7
CDS-3UTR CCA 90 bp GCCAGGCAGCTGTGGGCCAGGGCGACTTCCACCTGCTGGATCACAGAGGCCGGGCTGGGCCTTCCCTTCTaGCTCCTGACGCCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: ARQLWARATSTCWITEAGLGLPF*LLTPVL
Trigger: AAGCACAGGCGTCAGGAGCCAGAAGGGAAGGCCCAG...CCCGGCCTCTGTGATCCAGCAGGTGGAAGTCGCCCTGGCCCACAGCTGCCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CCA 90 bp GGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCGCCCAGGCACTGTCCTaGGCCTTCCCTTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: GQPGADTRLLSTHSPTPAAQALS*AFPSGS
Trigger: GGAGCCAGAAGGGAAGGCCCAGGACAGTGCCTGGGC...GGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CCA 90 bp GCCAGGCAGCTGTGGGCCAGGGCGACTTCCACCTGCTGGATCACAGAGGCCGGGAGCCTGAACGTGGGCTaGGTCCTTCAGATGGGTGGC +
Preference number: 4 (lower is better)
Translates to: ARQLWARATSTCWITEAGSLNVG*VLQMGG
Trigger: GCCACCCATCTGAAGGACCCAGCCCACGTTCAGGCT...CCCGGCCTCTGTGATCCAGCAGGTGGAAGTCGCCCTGGCCCACAGCTGCCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR TCA 90 bp GTGAGCAGTCTCAGGGACATGGTGTCCACGGCCATCTCCAGCCCGGGCTGCTGGCCTCCCAGTTCTTGGTaGGGTCGCGGATGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: VSSLRDMVSTAISSPGCWPPSSW*GRGWAA
Trigger: TGCAGCCCATCCGCGACCTCACCAAGAACTGGGAGG...CCAGCAGCCCGGGCTGGAGATGGCCGTGGACACCATGTCCCTGAGACTGCTCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395701.7
CDS-3UTR TCA 90 bp CGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGGCCAGGACCTCACCCTaGCGGCTGTACAGGGGATTG +
Preference number: 4 (lower is better)
Translates to: RASQEQTHGSSVHIPPPLARTSP*RLYRGL
Trigger: CAATCCCCTGTACAGCCGTCAGGGTGAGGTCCTGGC...CAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR TCA 90 bp GCGGCCATCCCAGGTTGCCGTGAGCTCGACAGGGCTCAAATCCTTGGACGCCAGCCTCTGGCTCCAACATaGAGGCCCCTCTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: AAIPGCRELDRAQILGRQPLAPT*RPLWGG
Trigger: CCCACCCCAGAGGGGCCTTCATGTTGGAGCCAGAGG...CTGGCGTCCAAGGATTTGAGCCCTGTCGAGCTCACGGCAACCTGGGATGGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR TCA 90 bp GGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCTGTCCTCCCAGTCCCTaGTGCGCTGGCTCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: GPARSRHTAPQYTFPHPCCPPSP*CAGSAL
Trigger: CAGAGCTGAGCCAGCGCATCAGGGACTGGGAGGACA...GCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR TCA 90 bp TCATCACTGTGGACCCCGAGCGGGACGACGTTGAAGCCATGGCCCGCTACGTCCGCGCTCGCTGGTGCGTaGGCAGTCTCAGGGACATGG +
Preference number: 4 (lower is better)
Translates to: SSLWTPSGTTLKPWPATSALAGA*AVSGTW
Trigger: CCATGTCCCTGAGACTGCTCACGCACCAGCGAGCGC...GGACGTAGCGGGCCATGGCTTCAACGTCGTCCCGCTCGGGGTCCACAGTGATGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR TCA 90 bp GCCAGGCAGCTGTGGGCCAGGGCGACTTCCACCTGCTGGATCACAGAGGCCGGGCCGGAGCAGATCGGCTaGGCAGATCTCAGACAGTGT +
Preference number: 4 (lower is better)
Translates to: ARQLWARATSTCWITEAGPEQIG*ADLRQC
Trigger: ACACTGTCTGAGATCTGCTCAGCCGATCTGCTCCGG...CCCGGCCTCTGTGATCCAGCAGGTGGAAGTCGCCCTGGCCCACAGCTGCCTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR GCA 90 bp GGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTGGGAGAAGCCGAGTaGTGGGACAGGGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GPARSRHTAPQYTFPHPCLGEAE*WDRAPA
Trigger: TGCAGGAGCCCTGTCCCAGCACTCGGCTTCTCCCAG...GCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp AGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCTCTACTGCCTCCTCTaGATCCTCGTCCTCGCCCCC +
Preference number: 4 (lower is better)
Translates to: RPGQPGADTRLLSTHSPTLYCLL*ILVLAP
Trigger: GGGGGCGAGGACGAGGATGCAGAGGAGGCAGTAGAG...GGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp CGGCTGCTGATCACAGGCCTGTTCGGGGCTGGACTCGGTGGGGCCTGGCTGGCCCTCAGGAAGCTCTACTaGCTCCTCTGCATCCTCGTC +
Preference number: 4 (lower is better)
Translates to: RLLITGLFGAGLGGAWLALRKLY*LLCILV
Trigger: GACGAGGATGCAGAGGAGGCAGTAGAGCTTCCTGAG...GGCCAGCCAGGCCCCACCGAGTCCAGCCCCGAACAGGCCTGTGATCAGCAGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR GCA 90 bp GGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCAAGGGGTCCAGGCTCTaGCAGGGGTCTGGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: GQPGADTRLLSTHSPTPAKGSRL*QGSGVS
Trigger: GGAGACTCCAGACCCCTGGCAGAGCCTGGACCCCTT...GGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp GCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCCAGCGCCCTTCCTCTTaGGCTTCTGTCCCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: AGPARSRHTAPQYTFPHPQRPSS*ASVPEP
Trigger: AGGCTCTGGGACAGAAGCGCAAGAGGAAGGGCGCTG...GGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp CTGGTGCGTGAGCAGTCTCAGGGACATGGTGTCCACGGCCATCTCCAGCCCGGGGGCACATGCTGCTCCTaGTCCTGGAGCAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LVREQSQGHGVHGHLQPGGTCCS*SWSRGC
Trigger: GCAGCCTCTGCTCCAGGAGCAGGAGCAGCATGTGCC...CCCGGGCTGGAGATGGCCGTGGACACCATGTCCCTGAGACTGCTCACGCACCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395701.7
CDS-3UTR GCA 90 bp GCTGGGCCATGGAGGGGGCAGCGTAGGTCTGGAAGCGCTTGTGCGCTCGCTGGTTTGTGCGCTCGCTGGTaGGTGAGCAGTCTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: AGPWRGQRRSGSACALAGLCARW*VSSLRD
Trigger: GTCCCTGAGACTGCTCACGCACCAGCGAGCGCACAA...ACCAGCGAGCGCACAAGCGCTTCCAGACCTACGCTGCCCCCTCCATGGCCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395701.7
CDS-3UTR GCA 90 bp AGAGAGGCGCCTTGGCAACCGGCGGCCATCCCAGGTTGCCGTGAGCTCGACAGGGGTTGCAGGACGGGCTaGAAGACAGGTGGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: REAPWQPAAIPGCRELDRGCRTG*KTGGLL
Trigger: CAGAAGCCCACCTGTCTTGCAGCCCGTCCTGCAACC...CCTGTCGAGCTCACGGCAACCTGGGATGGCCGCCGGTTGCCAAGGCGCCTCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR GCA 90 bp GCCATCCCAGGTTGCCGTGAGCTCGACAGGGCTCAAATCCTTGGACGCCAGCCCGCGGCCATCCCAGGTTaGCGTGAGCTCGACAGGGCT +
Preference number: 4 (lower is better)
Translates to: AIPGCRELDRAQILGRQPAAIPG*RELDRA
Trigger: AGCCCTGTCGAGCTCACGGCAACCTGGGATGGCCGC...GGGCTGGCGTCCAAGGATTTGAGCCCTGTCGAGCTCACGGCAACCTGGGATGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CCA 90 bp GGGCCATGGAGGGGGCAGCGTAGGTCTGGAAGCGCTTGTGCGCTCGCTGGTGCGCCGAAGAGAGCTGCTTaGCCCGCCTCTTTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: GPWRGQRRSGSACALAGAPKRAA*PASFQR
Trigger: TCTCTGGAAAGAGGCGGGCCAAGCAGCTCTCTTCGG...CGCACCAGCGAGCGCACAAGCGCTTCCAGACCTACGCTGCCCCCTCCATGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395701.7
CDS-3UTR CCA 90 bp CGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGGGGGGACATGCCCTCTaGCTCCAACATGAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: RASQEQTHGSSVHIPPPLGGHAL*LQHEGP
Trigger: GGGGCCTTCATGTTGGAGCCAGAGGGCATGTCCCCC...CAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp GGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCGGGGGACATGCCCTCTaGCTCCAACATGAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: GQPGADTRLLSTHSPTPAGGHAL*LQHEGP
Trigger: GGGGCCTTCATGTTGGAGCCAGAGGGCATGTCCCCC...GGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp GCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTCGCCCGCTGGTTCCATaGGGGACATGCCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: ASQEQTHGSSVHIPPPLPRPLVP*GTCPLA
Trigger: AGCCAGAGGGCATGTCCCCCATGGAACCAGCGGGCG...AGGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp CGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGTCTGGGTCCCTGGCATaGGGGAAACGCCCGCTGGTT +
Preference number: 4 (lower is better)
Translates to: RASQEQTHGSSVHIPPPLSGSLA*GKRPLV
Trigger: AACCAGCGGGCGTTTCCCCCATGCCAGGGACCCAGA...CAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp AGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCTCTGGGTCCCTGGCATaGGGGAAACGCCCGCTGGTT +
Preference number: 4 (lower is better)
Translates to: RPGQPGADTRLLSTHSPTSGSLA*GKRPLV
Trigger: AACCAGCGGGCGTTTCCCCCATGCCAGGGACCCAGA...GGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp GCGGCCATCCCAGGTTGCCGTGAGCTCGACAGGGCTCAAATCCTTGGACGCCAGGTCCTTCTGGGTCCCTaGCATGGGGGAAACGCCCGC +
Preference number: 4 (lower is better)
Translates to: AAIPGCRELDRAQILGRQVLLGP*HGGNAR
Trigger: GCGGGCGTTTCCCCCATGCCAGGGACCCAGAAGGAC...CTGGCGTCCAAGGATTTGAGCCCTGTCGAGCTCACGGCAACCTGGGATGGCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CCA 90 bp GGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTCCCGGTGTCCTTCTaGGTCCCTGGCATGGGGGAA +
Preference number: 4 (lower is better)
Translates to: GPARSRHTAPQYTFPHPCLPVSF*VPGMGE
Trigger: TTCCCCCATGCCAGGGACCCAGAAGGACACCGGGAG...GCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp AGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCGGAGAAGCCGAGTGCTaGGACAGGGCTCCTGCACAC +
Preference number: 4 (lower is better)
Translates to: RPGQPGADTRLLSTHSPTGEAEC*DRAPAH
Trigger: GTGTGCAGGAGCCCTGTCCCAGCACTCGGCTTCTCC...GGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp CGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGTTCTGGAGAGGGGCCTaGCTCCTGGGAGAAGCCGAG +
Preference number: 4 (lower is better)
Translates to: RASQEQTHGSSVHIPPPLFWRGA*LLGEAE
Trigger: CTCGGCTTCTCCCAGGAGCCAGGCCCCTCTCCAGAA...CAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp GGGGCCAAGGCCATACCACTGTCCTCCTTGTGCAAGGTGACTCGGCCCCAGAGCGGCTCCTGGACTCCTTaGGCTCCAGAGCGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: GAKAIPLSSLCKVTRPQSGSWTP*APERPW
Trigger: CCAAGGCCGCTCTGGAGCCCAAGGAGTCCAGGAGCC...GCTCTGGGGCCGAGTCACCTTGCACAAGGAGGACAGTGGTATGGCCTTGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CCA 90 bp AGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCTCTGCTGCGGGCTCCTaGACTCCTTGGGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: RPGQPGADTRLLSTHSPTSAAGS*TPWAPE
Trigger: CTCTGGAGCCCAAGGAGTCCAGGAGCCCGCAGCAGA...GGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp GGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCGCAGGGAGGCCAGCATaGAACGACACACCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: GRASQEQTHGSSVHIPPPAGRPA*NDTPRR
Trigger: CCTTCGAGGTGTGTCGTTCCATGCTGGCCTCCCTGC...GGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR CCA 90 bp GGGCCATGGAGGGGGCAGCGTAGGTCTGGAAGCGCTTGTGCGCTCGCTGGTGCGGCAGTCTCAGGGACATaGTGTCCACGGCCATCTCCA +
Preference number: 4 (lower is better)
Translates to: GPWRGQRRSGSACALAGAAVSGT*CPRPSP
Trigger: TGGAGATGGCCGTGGACACCATGTCCCTGAGACTGC...CGCACCAGCGAGCGCACAAGCGCTTCCAGACCTACGCTGCCCCCTCCATGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395701.7
CDS-3UTR CCA 90 bp GGGGCCAAGGCCATACCACTGTCCTCCTTGTGCAAGGTGACTCGGCCCCAGAGCCCTGCTGCGGGCTCCTaGACTCCTTGGGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: GAKAIPLSSLCKVTRPQSPAAGS*TPWAPE
Trigger: CTCTGGAGCCCAAGGAGTCCAGGAGCCCGCAGCAGG...GCTCTGGGGCCGAGTCACCTTGCACAAGGAGGACAGTGGTATGGCCTTGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CCA 90 bp AGAGAGGCGCCTTGGCAACCGGCGGCCATCCCAGGTTGCCGTGAGCTCGACAGGCCCAGACCAGTGGTCTaGGGCCAAGGCCATACCACT +
Preference number: 4 (lower is better)
Translates to: REAPWQPAAIPGCRELDRPRPVV*GQGHTT
Trigger: AGTGGTATGGCCTTGGCCCCAGACCACTGGTCTGGG...CCTGTCGAGCTCACGGCAACCTGGGATGGCCGCCGGTTGCCAAGGCGCCTCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CCA 90 bp TCCAGACACTCCCTCCTACCAGCCCGACTGCAGAGAGGCGCCTTGGCAACCGGCGGGCTGCAAGACAGGTaGGCTTCTGCCCCAGACCAG +
Preference number: 4 (lower is better)
Translates to: SRHSLLPARLQRGALATGGLQDR*ASAPDQ
Trigger: CTGGTCTGGGGCAGAAGCCCACCTGTCTTGCAGCCC...GCCGGTTGCCAAGGCGCCTCTCTGCAGTCGGGCTGGTAGGAGGGAGTGTCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CCA 90 bp TGCGCCAGGCAGCTGTGGGCCAGGGCGACTTCCACCTGCTGGATCACAGAGGCCAGGTGGTGCGGCAGCTaGAAGCAGAGCCTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: CARQLWARATSTCWITEARWCGS*KQSLVC
Trigger: GCAAACCAGGCTCTGCTTCCAGCTGCCGCACCACCT...GGCCTCTGTGATCCAGCAGGTGGAAGTCGCCCTGGCCCACAGCTGCCTGGCGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR TCA 90 bp CCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTCCCTCCCAGTTCTTGGTaGGGTCGCGGATGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PARSRHTAPQYTFPHPCLPPSSW*GRGWAA
Trigger: TGCAGCCCATCCGCGACCTCACCAAGAACTGGGAGG...GAGGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR TCA 90 bp GCGGCCATCCCAGGTTGCCGTGAGCTCGACAGGGCTCAAATCCTTGGACGCCAGCCTCCCAGTTCTTGGTaGGGTCGCGGATGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: AAIPGCRELDRAQILGRQPPSSW*GRGWAA
Trigger: TGCAGCCCATCCGCGACCTCACCAAGAACTGGGAGG...CTGGCGTCCAAGGATTTGAGCCCTGTCGAGCTCACGGCAACCTGGGATGGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR TCA 90 bp GGGGCCAAGGCCATACCACTGTCCTCCTTGTGCAAGGTGACTCGGCCCCAGAGCGCCAGGACCTCACCCTaGCGGCTGTACAGGGGATTG +
Preference number: 4 (lower is better)
Translates to: GAKAIPLSSLCKVTRPQSARTSP*RLYRGL
Trigger: CAATCCCCTGTACAGCCGTCAGGGTGAGGTCCTGGC...GCTCTGGGGCCGAGTCACCTTGCACAAGGAGGACAGTGGTATGGCCTTGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR TCA 90 bp ACTGCAGAGAGGCGCCTTGGCAACCGGCGGCCATCCCAGGTTGCCGTGAGCTCGCGCACGTGTTCATCCTaGAATCCTTCCGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: TAERRLGNRRPSQVAVSSRTCSS*NPSGWP
Trigger: TGGCCAGCCGGAAGGATTTCAGGATGAACACGTGCG...CGAGCTCACGGCAACCTGGGATGGCCGCCGGTTGCCAAGGCGCCTCTCTGCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR TCA 90 bp TGCGCCAGGCAGCTGTGGGCCAGGGCGACTTCCACCTGCTGGATCACAGAGGCCCGCACGTGTTCATCCTaGAATCCTTCCGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: CARQLWARATSTCWITEARTCSS*NPSGWP
Trigger: TGGCCAGCCGGAAGGATTTCAGGATGAACACGTGCG...GGCCTCTGTGATCCAGCAGGTGGAAGTCGCCCTGGCCCACAGCTGCCTGGCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR TCA 90 bp AGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTCGGTGTCCTCCCAGTCCCTaGTGCGCTGGCTCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: SQEQTHGSSVHIPPPLPRCPPSP*CAGSAL
Trigger: CAGAGCTGAGCCAGCGCATCAGGGACTGGGAGGACA...CCGAGGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR TCA 90 bp CAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTCGGAGCTGGGGGAACCGTaGGACCAGCTGGTCCCCATA +
Preference number: 4 (lower is better)
Translates to: QPGADTRLLSTHSPTPASELGEP*DQLVPI
Trigger: TATGGGGACCAGCTGGTCTCACGGTTCCCCCAGCTC...CGAGGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR TCA 90 bp GCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTCGGTGAGCTGGGGGAACCGTaGGACCAGCTGGTCCCCATA +
Preference number: 4 (lower is better)
Translates to: ARSRHTAPQYTFPHPCLGELGEP*DQLVPI
Trigger: TATGGGGACCAGCTGGTCTCACGGTTCCCCCAGCTC...ACCGAGGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR TCA 90 bp TCATCACTGTGGACCCCGAGCGGGACGACGTTGAAGCCATGGCCCGCTACGTCCGAGCTGGGGGAACCGTaGGACCAGCTGGTCCCCATA +
Preference number: 4 (lower is better)
Translates to: SSLWTPSGTTLKPWPATSELGEP*DQLVPI
Trigger: TATGGGGACCAGCTGGTCTCACGGTTCCCCCAGCTC...GGACGTAGCGGGCCATGGCTTCAACGTCGTCCCGCTCGGGGTCCACAGTGATGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR TCA 90 bp GCAGAGAGGCGCCTTGGCAACCGGCGGCCATCCCAGGTTGCCGTGAGCTCGACAGCCAGCCCACTACTCTaGGGAGCATCAGTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: AERRLGNRRPSQVAVSSTASPLL*GASVLL
Trigger: GAGCAGAACTGATGCTCCTCAGAGTAGTGGGCTGGC...TGTCGAGCTCACGGCAACCTGGGATGGCCGCCGGTTGCCAAGGCGCCTCTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR TCA 90 bp GGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCGATCCATGCTGCTGCTaGCTCGGAGCCCCACAGCTT +
Preference number: 4 (lower is better)
Translates to: GPARSRHTAPQYTFPHPCDPCCC*LGAPQL
Trigger: AAGCTGTGGGGCTCCGAGTCAGCAGCAGCATGGATC...GCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR TCA 90 bp GAGCATCAGATCCATGCTGCTGCTGACTCGGAGCCCCACAGCTTGGCACAGGCTCAGGGCAGGGTGCGGTaGCAGGCTGGTGATCCCAGG +
Preference number: 4 (lower is better)
Translates to: EHQIHAAADSEPHSLAQAQGRVR*QAGDPR
Trigger: CCTGGGATCACCAGCCTGTCACCGCACCCTGCCCTG...AGCCTGTGCCAAGCTGTGGGGCTCCGAGTCAGCAGCAGCATGGATCTGATGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR GCA 90 bp CCAGTGCAGCCTGTCTTCATCACTGTGGACCCCGAGCGGGACGACGTTGAAGCCAGGTCGCGGATGGGCTaGAAGAGGTGGGCGAAGCGC +
Preference number: 4 (lower is better)
Translates to: PVQPVFITVDPERDDVEARSRMG*KRWAKR
Trigger: GCGCTTCGCCCACCTCTTGCAGCCCATCCGCGACCT...GGCTTCAACGTCGTCCCGCTCGGGGTCCACAGTGATGAAGACAGGCTGCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR GCA 90 bp CTGGGTCCCTGGCATGGGGGAAACGCCCGCTGGTTCCATGGGGGACATGCCCTCTGCACCGAAGAGAGCTaGTTGGCCCGCCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: LGPWHGGNARWFHGGHALCTEES*LARLFP
Trigger: TGGAAAGAGGCGGGCCAAGCAGCTCTCTTCGGTGCA...GAGGGCATGTCCCCCATGGAACCAGCGGGCGTTTCCCCCATGCCAGGGACCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000518394.5
CDS-3UTR GCA 90 bp CGCCTTGGCAACCGGCGGCCATCCCAGGTTGCCGTGAGCTCGACAGGGCTCAAACAGGAACTCATTCTCTaGCTCCTGGGGGACCCCGGA +
Preference number: 4 (lower is better)
Translates to: RLGNRRPSQVAVSSTGLKQELIL*LLGDPG
Trigger: TCCGGGGTCCCCCAGGAGGCAGAGAATGAGTTCCTG...TTTGAGCCCTGTCGAGCTCACGGCAACCTGGGATGGCCGCCGGTTGCCAAGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR GCA 90 bp GTGAGCAGTCTCAGGGACATGGTGTCCACGGCCATCTCCAGCCCGGGCTGCTGGCAGGAACTCATTCTCTaGCTCCTGGGGGACCCCGGA +
Preference number: 4 (lower is better)
Translates to: VSSLRDMVSTAISSPGCWQELIL*LLGDPG
Trigger: TCCGGGGTCCCCCAGGAGGCAGAGAATGAGTTCCTG...CCAGCAGCCCGGGCTGGAGATGGCCGTGGACACCATGTCCCTGAGACTGCTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395701.7
CDS-3UTR GCA 90 bp GCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTCTGGGAGAAGCCGAGTaGTGGGACAGGGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: ASQEQTHGSSVHIPPPLPLGEAE*WDRAPA
Trigger: TGCAGGAGCCCTGTCCCAGCACTCGGCTTCTCCCAG...AGGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp AGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTCGGCTGGGAGAAGCCGAGTaGTGGGACAGGGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SQEQTHGSSVHIPPPLPRLGEAE*WDRAPA
Trigger: TGCAGGAGCCCTGTCCCAGCACTCGGCTTCTCCCAG...CCGAGGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp GCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTAGGGCAGCACTCTGCTaGGGGCTCCTGGACTCCTTG +
Preference number: 4 (lower is better)
Translates to: ASQEQTHGSSVHIPPPLPRAALC*GLLDSL
Trigger: CAAGGAGTCCAGGAGCCCGCAGCAGAGTGCTGCCCT...AGGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp AACGTGGGCTGGGTCCTTCAGATGGGTGGCTGGTCTCAAGTCGCAGGGGCAGCCAGGGCAGCACTCTGCTaGGGGCTCCTGGACTCCTTG +
Preference number: 4 (lower is better)
Translates to: NVGWVLQMGGWSQVAGAARAALC*GLLDSL
Trigger: CAAGGAGTCCAGGAGCCCGCAGCAGAGTGCTGCCCT...GGCTGCCCCTGCGACTTGAGACCAGCCACCCATCTGAAGGACCCAGCCCACGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR GCA 90 bp CGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCACTGGTGGAAGTCCTaGAGCTTGGCAGCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: RASQEQTHGSSVHIPPPLHWWKS*SLAAPF
Trigger: GAAGGGCGCTGCCAAGCTGCAGGACTTCCACCAGTG...CAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp GGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCGCCACCTCCCTCCTCTaGAGCTTCCGGAGAGTTTCC +
Preference number: 4 (lower is better)
Translates to: GPARSRHTAPQYTFPHPCATSLL*SFRRVS
Trigger: GGAAACTCTCCGGAAGCTGCAGAGGAGGGAGGTGGC...GCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp GATGGCAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCGCAGGCCGCAGCCACTaGTCAGCCACCTCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: DGNTALLGRASQEQTHGSAGRSH*SATSLL
Trigger: GAGGAGGGAGGTGGCTGAGCAGTGGCTGCGGCCTGC...GGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTGCCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp GGCAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGCAGGCCGCAGCCACTaGTCAGCCACCTCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GNTALLGRASQEQTHGSSAGRSH*SATSLL
Trigger: GAGGAGGGAGGTGGCTGAGCAGTGGCTGCGGCCTGC...TGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp CAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTCGGGCACATGCTGCTCCTaGTCCTGGAGCAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: QPGADTRLLSTHSPTPASGTCCS*SWSRGC
Trigger: GCAGCCTCTGCTCCAGGAGCAGGAGCAGCATGTGCC...CGAGGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp GGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCATCTCCAGCCCGGGCTaGTGGGTTATCTCCACTGTG +
Preference number: 4 (lower is better)
Translates to: GRASQEQTHGSSVHIPPPISSPG*WVISTV
Trigger: CACAGTGGAGATAACCCAGCAGCCCGGGCTGGAGAT...GGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR GCA 90 bp GGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCTTGTGCGCTCGCTGGTaGGTGAGCAGTCTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: GPARSRHTAPQYTFPHPCLCARW*VSSLRD
Trigger: GTCCCTGAGACTGCTCACGCACCAGCGAGCGCACAA...GCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR GCA 90 bp GGCCATGGAGGGGGCAGCGTAGGTCTGGAAGCGCTTGTGCGCTCGCTGGTGCGTAGGCTACTCACCAGCTaGAGGGAGGCCAGCATGGAA +
Preference number: 4 (lower is better)
Translates to: GHGGGSVGLEALVRSLVRRLLTS*REASME
Trigger: TTCCATGCTGGCCTCCCTGCAGCTGGTGAGTAGCCT...ACGCACCAGCGAGCGCACAAGCGCTTCCAGACCTACGCTGCCCCCTCCATGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395701.7
CDS-3UTR CCA 90 bp ATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCATGGGCTGCAAGAGGTaGGCGAAGCGCGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: IRPGQPGADTRLLSTHSPMGCKR*AKRAST
Trigger: CGTGGAGGCGCGCTTCGCCCACCTCTTGCAGCCCAT...GGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp GTGGTCTGGGGCCAAGGCCATACCACTGTCCTCCTTGTGCAAGGTGACTCGGCCATGGGCTGCAAGAGGTaGGCGAAGCGCGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: VVWGQGHTTVLLVQGDSAMGCKR*AKRAST
Trigger: CGTGGAGGCGCGCTTCGCCCACCTCTTGCAGCCCAT...GGCCGAGTCACCTTGCACAAGGAGGACAGTGGTATGGCCTTGGCCCCAGACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CCA 90 bp GAGCAGATCTCAGACAGTGTGCGGCGGCACATGGCGGCTTTCCGCAGTGTCCTGATGGGCTGCAAGAGGTaGGCGAAGCGCGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: EQISDSVRRHMAAFRSVLMGCKR*AKRAST
Trigger: CGTGGAGGCGCGCTTCGCCCACCTCTTGCAGCCCAT...CAGGACACTGCGGAAAGCCGCCATGTGCCGCCGCACACTGTCTGAGATCTGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CCA 90 bp CGGCCATCCCAGGTTGCCGTGAGCTCGACAGGGCTCAAATCCTTGGACGCCAGCGGGGGACATGCCCTCTaGCTCCAACATGAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: RPSQVAVSSTGLKSLDASGGHAL*LQHEGP
Trigger: GGGGCCTTCATGTTGGAGCCAGAGGGCATGTCCCCC...GCTGGCGTCCAAGGATTTGAGCCCTGTCGAGCTCACGGCAACCTGGGATGGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CCA 90 bp TTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACGCCCGCTGGTTCCATaGGGGACATGCCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LGRASQEQTHGSSVHIPPRPLVP*GTCPLA
Trigger: AGCCAGAGGGCATGTCCCCCATGGAACCAGCGGGCG...TGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp TTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCAGGGGGAAACGCCCGCTaGTTCCATGGGGGACATGCC +
Preference number: 4 (lower is better)
Translates to: LGRASQEQTHGSSVHIPPGGNAR*FHGGHA
Trigger: GGCATGTCCCCCATGGAACCAGCGGGCGTTTCCCCC...TGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp CAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTCGTCTGGGTCCCTGGCATaGGGGAAACGCCCGCTGGTT +
Preference number: 4 (lower is better)
Translates to: QPGADTRLLSTHSPTPASSGSLA*GKRPLV
Trigger: AACCAGCGGGCGTTTCCCCCATGCCAGGGACCCAGA...CGAGGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp GCGGCCATCCCAGGTTGCCGTGAGCTCGACAGGGCTCAAATCCTTGGACGCCAGTCTGGGTCCCTGGCATaGGGGAAACGCCCGCTGGTT +
Preference number: 4 (lower is better)
Translates to: AAIPGCRELDRAQILGRQSGSLA*GKRPLV
Trigger: AACCAGCGGGCGTTTCCCCCATGCCAGGGACCCAGA...CTGGCGTCCAAGGATTTGAGCCCTGTCGAGCTCACGGCAACCTGGGATGGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CCA 90 bp GCATGGGGGAAACGCCCGCTGGTTCCATGGGGGACATGCCCTCTGGCTCCAACATCTGGGTCCCTGGCATaGGGGAAACGCCCGCTGGTT +
Preference number: 4 (lower is better)
Translates to: AWGKRPLVPWGTCPLAPTSGSLA*GKRPLV
Trigger: AACCAGCGGGCGTTTCCCCCATGCCAGGGACCCAGA...TGTTGGAGCCAGAGGGCATGTCCCCCATGGAACCAGCGGGCGTTTCCCCCATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000518394.5
CDS-3UTR CCA 90 bp GGGCCAGGGCGACTTCCACCTGCTGGATCACAGAGGCCGGGCTCGCTGCAAGGCCACGGAAACTTCCATTaGCTGCTCCTCAGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: GPGRLPPAGSQRPGSLQGHGNFH*LLLSPP
Trigger: GGGAGGACTGAGGAGCAGCCAATGGAAGTTTCCGTG...GCCTTGCAGCGAGCCCGGCCTCTGTGATCCAGCAGGTGGAAGTCGCCCTGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CCA 90 bp CCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTCTCTGCTGCGGGCTCCTaGACTCCTTGGGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: PARSRHTAPQYTFPHPCLSAAGS*TPWAPE
Trigger: CTCTGGAGCCCAAGGAGTCCAGGAGCCCGCAGCAGA...GAGGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp GGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCGCAGCATGTACCTCCTaGGCAGGGCAGCACTCTGCT +
Preference number: 4 (lower is better)
Translates to: GPARSRHTAPQYTFPHPCAACTS*AGQHSA
Trigger: AGCAGAGTGCTGCCCTGCCCAGGAGGTACATGCTGC...GCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp GGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCGCTCTGCCAGGGGTCTaGAGTCTCCTTCACGCAGGA +
Preference number: 4 (lower is better)
Translates to: GQPGADTRLLSTHSPTPAALPGV*SLLHAG
Trigger: TCCTGCGTGAAGGAGACTCCAGACCCCTGGCAGAGC...GGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp GCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCGCAGCCAGGTACCACTaGTGGAAGTCCTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: AGPARSRHTAPQYTFPHPAARYH*WKSCSL
Trigger: CAAGCTGCAGGACTTCCACCAGTGGTACCTGGCTGC...GGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp AGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTCGGAGGGAATCCTCCAGGTaGTCCTCCTCTGCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: SQEQTHGSSVHIPPPLPRRESSR*SSSAGR
Trigger: GCGGCCTGCAGAGGAGGACCACCTGGAGGATTCCCT...CCGAGGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp CCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTCAGTCCCTGATGCGCTaGCTCAGCTCTGTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PGQPGADTRLLSTHSPTPQSLMR*LSSVSW
Trigger: CCAGGAGACAGAGCTGAGCCAGCGCATCAGGGACTG...AGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR CCA 90 bp GATGGCAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCACCTCGAAGGCCGGCTaGCCAGCCACCAGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: DGNTALLGRASQEQTHGSTSKAG*PATSSA
Trigger: TGCGGAGCTGGTGGCTGGCCAGCCGGCCTTCGAGGT...GGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTGCCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR CCA 90 bp TCTGCCCCAGACCAGTGGTCTGGGGCCAAGGCCATACCACTGTCCTCCTTGTGCTGCAGAGAGGCGCCTTaGCAACCGGCGGCCATCCCA +
Preference number: 4 (lower is better)
Translates to: SAPDQWSGAKAIPLSSLCCREAP*QPAAIP
Trigger: TGGGATGGCCGCCGGTTGCCAAGGCGCCTCTCTGCA...GCACAAGGAGGACAGTGGTATGGCCTTGGCCCCAGACCACTGGTCTGGGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CCA 90 bp CAGACACTCCCTCCTACCAGCCCGACTGCAGAGAGGCGCCTTGGCAACCGGCGGTTCTTGGCTCTAGGCTaGGTACAGTTGACCCCGGGG +
Preference number: 4 (lower is better)
Translates to: QTLPPTSPTAERRLGNRRFLALG*VQLTPG
Trigger: CCCCGGGGTCAACTGTACCCAGCCTAGAGCCAAGAA...CCGCCGGTTGCCAAGGCGCCTCTCTGCAGTCGGGCTGGTAGGAGGGAGTGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CCA 90 bp GGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCATTGGCCTGCAGGGGTaGCACATCAGCAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: GPARSRHTAPQYTFPHPCIGLQG*HISRVW
Trigger: CCAGACCCTGCTGATGTGCCACCCCTGCAGGCCAAT...GCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395701.7
CDS-3UTR CCA 90 bp TTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCAGCCCCAGGGCCCTaGGCTTCGAACCCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LLGRASQEQTHGSSVHIPPAPGP*ASNPAA
Trigger: AGCAGCCGGGTTCGAAGCCCAGGGCCCTGGGGCTGG...GGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR CAA 72 bp CAGTGGTCTGGGGCCAAGGCCATACCACTGTCCTCCTaGTGCAAGGTGACTCGGCCCCAGAGCCAGGGTTGC +
Preference number: 4 (lower is better)
Translates to: QWSGAKAIPLSS*CKVTRPQSQGC
Trigger: GCAACCCTGGCTCTGGGGCCGAGTCACCTTGCACAAGGAGGACAGTGGTATGGCCTTGGCCCCAGACCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR TCA 90 bp GGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCGCACGTGTTCATCCTaGAATCCTTCCGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GPARSRHTAPQYTFPHPCRTCSS*NPSGWP
Trigger: TGGCCAGCCGGAAGGATTTCAGGATGAACACGTGCG...GCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR TCA 90 bp GGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCCGCACGTGTTCATCCTaGAATCCTTCCGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GQPGADTRLLSTHSPTPARTCSS*NPSGWP
Trigger: TGGCCAGCCGGAAGGATTTCAGGATGAACACGTGCG...GGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR TCA 90 bp TTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCATGTCCTCCCAGTCCCTaGTGCGCTGGCTCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LGRASQEQTHGSSVHIPPCPPSP*CAGSAL
Trigger: CAGAGCTGAGCCAGCGCATCAGGGACTGGGAGGACA...TGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR TCA 90 bp TGGCAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCGCGCTCGCTGGTGCGTaGGCAGTCTCAGGGACATGG +
Preference number: 4 (lower is better)
Translates to: WQHCFIRPGQPGADTRLLALAGA*AVSGTW
Trigger: CCATGTCCCTGAGACTGCTCACGCACCAGCGAGCGC...GAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR TCA 90 bp TTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCATTCGAACCCGGCTGCTaGTCACAGGCCTGTTCGGGG +
Preference number: 4 (lower is better)
Translates to: LGRASQEQTHGSSVHIPPFEPGC*SQACSG
Trigger: CCCCGAACAGGCCTGTGATCAGCAGCCGGGTTCGAA...TGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR TCA 90 bp AACGTGGGCTGGGTCCTTCAGATGGGTGGCTGGTCTCAAGTCGCAGGGGCAGCCAGAGGTTCACCTTGCTaGGGTGCAGGTGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: NVGWVLQMGGWSQVAGAARGSPC*GAGAGQ
Trigger: CTGCCCTGCACCTGCACCTCAGCAAGGTGAACCTCT...GGCTGCCCCTGCGACTTGAGACCAGCCACCCATCTGAAGGACCCAGCCCACGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR TCA 90 bp CGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGAGGGACACCACTCATTaGGCTGCTCCTGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: RASQEQTHGSSVHIPPPLRDTTH*AAPGAE
Trigger: CTCTGCTCCAGGAGCAGCTCAATGAGTGGTGTCCCT...CAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522304.1
CDS-3UTR GCA 90 bp TTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCAAGGGACCGCAGGGCTaGCTTCCGAGGGGTACGGCG +
Preference number: 4 (lower is better)
Translates to: LLGRASQEQTHGSSVHIPKGPQG*LPRGTA
Trigger: CGCCGTACCCCTCGGAAGGCAGCCCTGCGGTCCCTT...GGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp GGCAACCCCATTGGCCCTGTCCTCCTGCACCGAAGAGAGCTGCTTGGCCCGCCTTTGGCCCTGTCCTCCTaGACCGAAGAGAGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: GNPIGPVLLHRRELLGPPLALSS*TEESCL
Trigger: CAAGCAGCTCTCTTCGGTGCAGGAGGACAGGGCCAA...AGGCGGGCCAAGCAGCTCTCTTCGGTGCAGGAGGACAGGGCCAATGGGGTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
CDS-3UTR GCA 90 bp GCAGAGAGGCGCCTTGGCAACCGGCGGCCATCCCAGGTTGCCGTGAGCTCGACAGAAACTTCCATTGGCTaGTCCTCAGTCCTCCCGGTG +
Preference number: 4 (lower is better)
Translates to: AERRLGNRRPSQVAVSSTETSIG*SSVLPV
Trigger: CACCGGGAGGACTGAGGAGCAGCCAATGGAAGTTTC...TGTCGAGCTCACGGCAACCTGGGATGGCCGCCGGTTGCCAAGGCGCCTCTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR GCA 90 bp GCAGATCGGCTGAGCAGATCTCAGACAGTGTGCGGCGGCACATGGCGGCTTTCCCTCTACTGCCTCCTCTaGATCCTCGTCCTCGCCCCC +
Preference number: 4 (lower is better)
Translates to: ADRLSRSQTVCGGTWRLSLYCLL*ILVLAP
Trigger: GGGGGCGAGGACGAGGATGCAGAGGAGGCAGTAGAG...GGAAAGCCGCCATGTGCCGCCGCACACTGTCTGAGATCTGCTCAGCCGATCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR GCA 90 bp GGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTCAGGAAGCTCTACTaGCTCCTCTGCATCCTCGTC +
Preference number: 4 (lower is better)
Translates to: GRASQEQTHGSSVHIPPPLRKLY*LLCILV
Trigger: GACGAGGATGCAGAGGAGGCAGTAGAGCTTCCTGAG...GGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp TTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCAAAGGGGTCCAGGCTCTaGCAGGGGTCTGGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: LGRASQEQTHGSSVHIPPKGSRL*QGSGVS
Trigger: GGAGACTCCAGACCCCTGGCAGAGCCTGGACCCCTT...TGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp AGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTCGGCAGCGCCCTTCCTCTTaGGCTTCTGTCCCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: SQEQTHGSSVHIPPPLPRQRPSS*ASVPEP
Trigger: AGGCTCTGGGACAGAAGCGCAAGAGGAAGGGCGCTG...CCGAGGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp GCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTCGGTTTCGCCGAAGCCGCCTaGTGTCGGCATGGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: ARSRHTAPQYTFPHPCLGFAEAA*CRHGLH
Trigger: ATGCAGACCATGCCGACAGCAGGCGGCTTCGGCGAA...ACCGAGGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp GCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTCAAAGGGCACATGCTaGTCCTGCTCCTGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: AGPARSRHTAPQYTFPHPSKGTC*SCSWSR
Trigger: TCTGCTCCAGGAGCAGGAGCAGCATGTGCCCTTTGA...GGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp CCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTATCTCCAGCCCGGGCTaGTGGGTTATCTCCACTGTG +
Preference number: 4 (lower is better)
Translates to: PGQPGADTRLLSTHSPTPISSPG*WVISTV
Trigger: CACAGTGGAGATAACCCAGCAGCCCGGGCTGGAGAT...AGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR GCA 90 bp GGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCATCTCCAGCCCGGGCTaGTGGGTTATCTCCACTGTG +
Preference number: 4 (lower is better)
Translates to: GPARSRHTAPQYTFPHPCISSPG*WVISTV
Trigger: CACAGTGGAGATAACCCAGCAGCCCGGGCTGGAGAT...GCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR GCA 90 bp CAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTCGTTGTGCGCTCGCTGGTaGGTGAGCAGTCTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: QPGADTRLLSTHSPTPASLCARW*VSSLRD
Trigger: GTCCCTGAGACTGCTCACGCACCAGCGAGCGCACAA...CGAGGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR GCA 90 bp GCAGATCGGCTGAGCAGATCTCAGACAGTGTGCGGCGGCACATGGCGGCTTTCCGTCTGGAAGCGCTTGTaGGCTCGCTGGTGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: ADRLSRSQTVCGGTWRLSVWKRL*ARWCVS
Trigger: GCTCACGCACCAGCGAGCGCACAAGCGCTTCCAGAC...GGAAAGCCGCCATGTGCCGCCGCACACTGTCTGAGATCTGCTCAGCCGATCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR GCA 90 bp GCTCTAGGCTGGGTACAGTTGACCCCGGGGGTTGAGGGAGGCAGCAATGGCCTCCCACTGTCCTCCTTGTaGAAGGTGACTCGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: ALGWVQLTPGVEGGSNGLPLSSL*KVTRPQ
Trigger: CTGGGGCCGAGTCACCTTGCACAAGGAGGACAGTGG...GAGGCCATTGCTGCCTCCCTCAACCCCCGGGGTCAACTGTACCCAGCCTAGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR GCA 90 bp GGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCAGATCTCAGACAGTGTaGGGCGGCACATGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: GQPGADTRLLSTHSPTPARSQTV*GGTWRL
Trigger: AAGCCGCCATGTGCCGCCGCACACTGTCTGAGATCT...GGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR GCA 90 bp CTCCAGTGCAGCCTGTCTTCATCACTGTGGACCCCGAGCGGGACGACGTTGAAGGTCAAGGCAGGGCCCTaGAGAGACAGGTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LQCSLSSSLWTPSGTTLKVKAGP*RDRWAG
Trigger: CCCTGCCCACCTGTCTCTGCAGGGCCCTGCCTTGAC...CTTCAACGTCGTCCCGCTCGGGGTCCACAGTGATGAAGACAGGCTGCACTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CCA 90 bp GGCAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGGGGGAAACGCCCGCTaGTTCCATGGGGGACATGCC +
Preference number: 4 (lower is better)
Translates to: GNTALLGRASQEQTHGSSGGNAR*FHGGHA
Trigger: GGCATGTCCCCCATGGAACCAGCGGGCGTTTCCCCC...TGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp CCATCCCAGGTTGCCGTGAGCTCGACAGGGCTCAAATCCTTGGACGCCAGCCCAGGAGAAGCCGAGTGCTaGGACAGGGCTCCTGCACAC +
Preference number: 4 (lower is better)
Translates to: PSQVAVSSTGLKSLDASPGEAEC*DRAPAH
Trigger: GTGTGCAGGAGCCCTGTCCCAGCACTCGGCTTCTCC...TGGGCTGGCGTCCAAGGATTTGAGCCCTGTCGAGCTCACGGCAACCTGGGATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CCA 90 bp TCTGCCCCAGACCAGTGGTCTGGGGCCAAGGCCATACCACTGTCCTCCTTGTGCTTCTGGAGAGGGGCCTaGCTCCTGGGAGAAGCCGAG +
Preference number: 4 (lower is better)
Translates to: SAPDQWSGAKAIPLSSLCFWRGA*LLGEAE
Trigger: CTCGGCTTCTCCCAGGAGCCAGGCCCCTCTCCAGAA...GCACAAGGAGGACAGTGGTATGGCCTTGGCCCCAGACCACTGGTCTGGGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CCA 90 bp ACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACGCTCCAGAGCGGCCTTaGGGGCCGAGGCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: TALLGRASQEQTHGSSVHAPERP*GPRPQE
Trigger: TTCCTGAGGCCTCGGCCCCCAAGGCCGCTCTGGAGC...GTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp CATGGAGGGGGCAGCGTAGGTCTGGAAGCGCTTGTGCGCTCGCTGGTGCGTGAGGCCAGGTACCACTGGTaGAAGTCCTGCAGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: HGGGSVGLEALVRSLVREARYHW*KSCSLA
Trigger: TGCCAAGCTGCAGGACTTCCACCAGTGGTACCTGGC...CTCACGCACCAGCGAGCGCACAAGCGCTTCCAGACCTACGCTGCCCCCTCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395701.7
CDS-3UTR CCA 90 bp AGATGGCAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCGGTCAGCGGCTTCCCTaGGGTCTGCTCCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: RWQHCFIRPGQPGADTRLGQRLP*GLLPRA
Trigger: AGCCCGAGGGAGCAGACCCCAGGGAAGCCGCTGACC...GAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTGCCATCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR CCA 90 bp CAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACCTCGAAGGCCGGCTaGCCAGCCACCAGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: QHCFIRPGQPGADTRLLSTSKAG*PATSSA
Trigger: TGCGGAGCTGGTGGCTGGCCAGCCGGCCTTCGAGGT...ACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR CCA 90 bp TGGCAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCCACATCAGCAGGGTCTaGGGACCGTCTCCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: WQHCFIRPGQPGADTRLLHISRV*GPSPPP
Trigger: GGGAGGGGGAGACGGTCCCCAGACCCTGCTGATGTG...GAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395701.7
CDS-3UTR CCA 90 bp TTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCAGGCCTGTTCGGGGCTaGACTCGGTGGGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: LLGRASQEQTHGSSVHIPRPVRG*TRWGLA
Trigger: AGCCAGGCCCCACCGAGTCCAGCCCCGAACAGGCCT...GGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CCA 90 bp GGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCGGTCCTTCAGATGGGTaGCTGGTCTCAAGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: GQPGADTRLLSTHSPTPAGPSDG*LVSSRR
Trigger: CCTGCGACTTGAGACCAGCCACCCATCTGAAGGACC...GGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CCA 90 bp GGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCTCATTGAGCTGCTCCTaGAGCAGAGGCTGCACTGTG +
Preference number: 4 (lower is better)
Translates to: GRASQEQTHGSSVHIPPPSLSCS*SRGCTV
Trigger: CACAGTGCAGCCTCTGCTCCAGGAGCAGCTCAATGA...GGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522304.1
CDS-3UTR TCA 90 bp AGCTGGCAACCCCATTGGCCCTGTCCTCCTGCACCGAAGAGAGCTGCTTGGCCCCGCACGTGTTCATCCTaGAATCCTTCCGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SWQPHWPCPPAPKRAAWPRTCSS*NPSGWP
Trigger: TGGCCAGCCGGAAGGATTTCAGGATGAACACGTGCG...GGGCCAAGCAGCTCTCTTCGGTGCAGGAGGACAGGGCCAATGGGGTTGCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518394.5
CDS-3UTR TCA 90 bp CACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACCTCTGGCTCCAACATaGAGGCCCCTCTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: HCFIRPGQPGADTRLLSTPLAPT*RPLWGG
Trigger: CCCACCCCAGAGGGGCCTTCATGTTGGAGCCAGAGG...TGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR TCA 90 bp GGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTCTGGGAGGTGGCGATaGAGAGCTCCACATTCCTTC +
Preference number: 4 (lower is better)
Translates to: GQPGADTRLLSTHSPTPASGRWR*RAPHSF
Trigger: GAAGGAATGTGGAGCTCTTCATCGCCACCTCCCAGA...GGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR TCA 90 bp AGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCTCTGGGAGGTGGCGATaGAGAGCTCCACATTCCTTC +
Preference number: 4 (lower is better)
Translates to: RPGQPGADTRLLSTHSPTSGRWR*RAPHSF
Trigger: GAAGGAATGTGGAGCTCTTCATCGCCACCTCCCAGA...GGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR TCA 90 bp CCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTCAGGGACACCACTCATTaGGCTGGGGGAACCGTGAGA +
Preference number: 4 (lower is better)
Translates to: PARSRHTAPQYTFPHPCLRDTTH*AGGTVR
Trigger: TCTCACGGTTCCCCCAGCTCAATGAGTGGTGTCCCT...GAGGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR TCA 90 bp TTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCGCGCTCGCTGGTGCGTaGGCAGTCTCAGGGACATGG +
Preference number: 4 (lower is better)
Translates to: LLGRASQEQTHGSSVHIPALAGA*AVSGTW
Trigger: CCATGTCCCTGAGACTGCTCACGCACCAGCGAGCGC...GGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR TCA 90 bp CACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACAGCGCTCGCTGGTGCGTaGGCAGTCTCAGGGACATGG +
Preference number: 4 (lower is better)
Translates to: HCFIRPGQPGADTRLLSTALAGA*AVSGTW
Trigger: CCATGTCCCTGAGACTGCTCACGCACCAGCGAGCGC...TGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR TCA 90 bp GCCATCCCAGGTTGCCGTGAGCTCGACAGGGCTCAAATCCTTGGACGCCAGCCCCATCCCAGGTTGCCGTaGGCTCGACAGGGCTCAAAT +
Preference number: 4 (lower is better)
Translates to: AIPGCRELDRAQILGRQPHPRLP*ARQGSN
Trigger: ATTTGAGCCCTGTCGAGCTCACGGCAACCTGGGATG...GGGCTGGCGTCCAAGGATTTGAGCCCTGTCGAGCTCACGGCAACCTGGGATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR TCA 90 bp AGCGGGACGACGTTGAAGCCATGGCCCGCTACGTCCAGGACTTCCACCCAAGACGTGGAGGTGGAGTTCTaGGCTCAGGTGAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SGTTLKPWPATSRTSTQDVEVEF*AQVSSC
Trigger: GCAGCTGCTCACCTGAGCTCAGAACTCCACCTCCAC...GTCTTGGGTGGAAGTCCTGGACGTAGCGGGCCATGGCTTCAACGTCGTCCCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR TCA 90 bp GGCAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGCGGTGACAGGCTGGTaGTCCCAGGTAGAGGACAGG +
Preference number: 4 (lower is better)
Translates to: GNTALLGRASQEQTHGSSAVTGW*SQVEDR
Trigger: CCTGTCCTCTACCTGGGATCACCAGCCTGTCACCGC...TGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR GCA 90 bp AGGACTACATCGTGGACCACTCCATTGCCATCTACCTGCTCAACCCTGACGGCCAAGGGACCGCAGGGCTaGCTTCCGAGGGGTACGGCG +
Preference number: 4 (lower is better)
Translates to: RTTSWTTPLPSTCSTLTAKGPQG*LPRGTA
Trigger: CGCCGTACCCCTCGGAAGGCAGCCCTGCGGTCCCTT...GGCCGTCAGGGTTGAGCAGGTAGATGGCAATGGAGTGGTCCACGATGTAGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR GCA 90 bp AGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTCGGTGCACCGAAGAGAGCTaGTTGGCCCGCCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: SQEQTHGSSVHIPPPLPRCTEES*LARLFP
Trigger: TGGAAAGAGGCGGGCCAAGCAGCTCTCTTCGGTGCA...CCGAGGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp GCTCTAGGCTGGGTACAGTTGACCCCGGGGGTTGAGGGAGGCAGCAATGGCCTCTGCACCGAAGAGAGCTaGTTGGCCCGCCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: ALGWVQLTPGVEGGSNGLCTEES*LARLFP
Trigger: TGGAAAGAGGCGGGCCAAGCAGCTCTCTTCGGTGCA...GAGGCCATTGCTGCCTCCCTCAACCCCCGGGGTCAACTGTACCCAGCCTAGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR GCA 90 bp AACGTGGGCTGGGTCCTTCAGATGGGTGGCTGGTCTCAAGTCGCAGGGGCAGCCTGCACCGAAGAGAGCTaGTTGGCCCGCCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: NVGWVLQMGGWSQVAGAACTEES*LARLFP
Trigger: TGGAAAGAGGCGGGCCAAGCAGCTCTCTTCGGTGCA...GGCTGCCCCTGCGACTTGAGACCAGCCACCCATCTGAAGGACCCAGCCCACGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR GCA 90 bp CGGCCATCCCAGGTTGCCGTGAGCTCGACAGGGCTCAAATCCTTGGACGCCAGCTTGGCCCTGTCCTCCTaGACCGAAGAGAGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: RPSQVAVSSTGLKSLDASLALSS*TEESCL
Trigger: CAAGCAGCTCTCTTCGGTGCAGGAGGACAGGGCCAA...GCTGGCGTCCAAGGATTTGAGCCCTGTCGAGCTCACGGCAACCTGGGATGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR GCA 90 bp AGCTGGCAACCCCATTGGCCCTGTCCTCCTGCACCGAAGAGAGCTGCTTGGCCCTTGGCCCTGTCCTCCTaGACCGAAGAGAGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: SWQPHWPCPPAPKRAAWPLALSS*TEESCL
Trigger: CAAGCAGCTCTCTTCGGTGCAGGAGGACAGGGCCAA...GGGCCAAGCAGCTCTCTTCGGTGCAGGAGGACAGGGCCAATGGGGTTGCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
CDS-3UTR GCA 90 bp CGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGGAAACTTCCATTGGCTaGTCCTCAGTCCTCCCGGTG +
Preference number: 4 (lower is better)
Translates to: RASQEQTHGSSVHIPPPLETSIG*SSVLPV
Trigger: CACCGGGAGGACTGAGGAGCAGCCAATGGAAGTTTC...CAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp TGGCAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCCTCTACTGCCTCCTCTaGATCCTCGTCCTCGCCCCC +
Preference number: 4 (lower is better)
Translates to: WQHCFIRPGQPGADTRLLLYCLL*ILVLAP
Trigger: GGGGGCGAGGACGAGGATGCAGAGGAGGCAGTAGAG...GAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp ACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACCTCCTTCACGCAGGATaGAGGCTCTGGGGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: TALLGRASQEQTHGSSVHLLHAG*RLWGPL
Trigger: GAGGGGGCCCCAGAGCCTGCATCCTGCGTGAAGGAG...GTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp ATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCGCCACCTCCCTCCTCTaGAGCTTCCGGAGAGTTTCC +
Preference number: 4 (lower is better)
Translates to: IRPGQPGADTRLLSTHSPATSLL*SFRRVS
Trigger: GGAAACTCTCCGGAAGCTGCAGAGGAGGGAGGTGGC...GGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp ATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCTCCTGGAGCAGAGGCTaGACTGTGTCCTCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: IRPGQPGADTRLLSTHSPSWSRG*TVSSQS
Trigger: GGACTGGGAGGACACAGTGCAGCCTCTGCTCCAGGA...GGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR GCA 90 bp CCAGTGCAGCCTGTCTTCATCACTGTGGACCCCGAGCGGGACGACGTTGAAGCCTCCTGGAGCAGAGGCTaGACTGTGTCCTCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: PVQPVFITVDPERDDVEASWSRG*TVSSQS
Trigger: GGACTGGGAGGACACAGTGCAGCCTCTGCTCCAGGA...GGCTTCAACGTCGTCCCGCTCGGGGTCCACAGTGATGAAGACAGGCTGCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR GCA 90 bp GGCAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGGCACATGCTGCTCCTaGTCCTGGAGCAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GNTALLGRASQEQTHGSSGTCCS*SWSRGC
Trigger: GCAGCCTCTGCTCCAGGAGCAGGAGCAGCATGTGCC...TGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp GCCATCCCAGGTTGCCGTGAGCTCGACAGGGCTCAAATCCTTGGACGCCAGCCCCCCCAGAGCCAGGGTTaGCAGTTCACAGCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: AIPGCRELDRAQILGRQPPQSQG*QFTAQV
Trigger: AACCTGAGCTGTGAACTGGCAACCCTGGCTCTGGGG...GGGCTGGCGTCCAAGGATTTGAGCCCTGTCGAGCTCACGGCAACCTGGGATGGC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR GCA 90 bp ACTCCCTCCTACCAGCCCGACTGCAGAGAGGCGCCTTGGCAACCGGCGGCCATCGAGGAGCATCAGTTCTaGTCAGAGAGGGGAGGAACA +
Preference number: 4 (lower is better)
Translates to: TPSYQPDCREAPWQPAAIEEHQF*SERGGT
Trigger: TGTTCCTCCCCTCTCTGAGCAGAACTGATGCTCCTC...GATGGCCGCCGGTTGCCAAGGCGCCTCTCTGCAGTCGGGCTGGTAGGAGGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR GCA 90 bp TCTGCCCCAGACCAGTGGTCTGGGGCCAAGGCCATACCACTGTCCTCCTTGTGCTCCTACCAGCCCGACTaGAGAGAGGCGCCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: SAPDQWSGAKAIPLSSLCSYQPD*REAPWQ
Trigger: TTGCCAAGGCGCCTCTCTGCAGTCGGGCTGGTAGGA...GCACAAGGAGGACAGTGGTATGGCCTTGGCCCCAGACCACTGGTCTGGGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CCA 90 bp CAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTAGATACTCGCCCAGCTaGGCCGCCACGTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: QHCFIRPGQPGADTRLLSRYSPS*AATSTS
Trigger: GGAGGTGGACGTGGCGGCCCAGCTGGGCGAGTATCT...ACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp GCCCGCTGGTTCCATGGGGGACATGCCCTCTGGCTCCAACATGAAGGCCCCTCTACGCAGGCAGAGCCCTaGATCAACAACGCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: ARWFHGGHALWLQHEGPSTQAEP*INNAAS
Trigger: TGAGGCAGCGTTGTTGATCCAGGGCTCTGCCTGCGT...AGAGGGGCCTTCATGTTGGAGCCAGAGGGCATGTCCCCCATGGAACCAGCGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518394.5
CDS-3UTR CCA 90 bp CAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTCGCCGAAGAGAGCTGCTTaGCCCGCCTCTTTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: QPGADTRLLSTHSPTPASPKRAA*PASFQR
Trigger: TCTCTGGAAAGAGGCGGGCCAAGCAGCTCTCTTCGG...CGAGGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp GGGGCCAAGGCCATACCACTGTCCTCCTTGTGCAAGGTGACTCGGCCCCAGAGCCCGAAGAGAGCTGCTTaGCCCGCCTCTTTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: GAKAIPLSSLCKVTRPQSPKRAA*PASFQR
Trigger: TCTCTGGAAAGAGGCGGGCCAAGCAGCTCTCTTCGG...GCTCTGGGGCCGAGTCACCTTGCACAAGGAGGACAGTGGTATGGCCTTGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CCA 90 bp ACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACGTCCTTCTGGGTCCCTaGCATGGGGGAAACGCCCGC +
Preference number: 4 (lower is better)
Translates to: TALLGRASQEQTHGSSVHVLLGP*HGGNAR
Trigger: GCGGGCGTTTCCCCCATGCCAGGGACCCAGAAGGAC...GTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp CTGGTGCGTGAGCAGTCTCAGGGACATGGTGTCCACGGCCATCTCCAGCCCGGGCACGGAAACTTCCATTaGCTGCTCCTCAGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: LVREQSQGHGVHGHLQPGHGNFH*LLLSPP
Trigger: GGGAGGACTGAGGAGCAGCCAATGGAAGTTTCCGTG...CCCGGGCTGGAGATGGCCGTGGACACCATGTCCCTGAGACTGCTCACGCACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395701.7
CDS-3UTR CCA 90 bp GGCAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGGAGAAGCCGAGTGCTaGGACAGGGCTCCTGCACAC +
Preference number: 4 (lower is better)
Translates to: GNTALLGRASQEQTHGSSGEAEC*DRAPAH
Trigger: GTGTGCAGGAGCCCTGTCCCAGCACTCGGCTTCTCC...TGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp TGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATGGGCATCGGGCCTTCTaGAGAGGGGCCTGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: CFIRPGQPGADTRLLSTHGHRAF*RGAWLL
Trigger: CAGGAGCCAGGCCCCTCTCCAGAAGGCCCGATGCCC...ATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp TTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCGGGCATCGGGCCTTCTaGAGAGGGGCCTGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: FIRPGQPGADTRLLSTHSGHRAF*RGAWLL
Trigger: CAGGAGCCAGGCCCCTCTCCAGAAGGCCCGATGCCC...GGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp CCCAGGCTAGTCACAGTTACCGCGTGTACTACAATGCAGGCCCCAAGGATGAGGGGGCATCGGGCCTTCTaGAGAGGGGCCTGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: PRLVTVTACTTMQAPRMRGHRAF*RGAWLL
Trigger: CAGGAGCCAGGCCCCTCTCCAGAAGGCCCGATGCCC...CCTCATCCTTGGGGCCTGCATTGTAGTACACGCGGTAACTGTGACTAGCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CCA 90 bp ACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACGGCTCCTGGACTCCTTaGGCTCCAGAGCGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: TALLGRASQEQTHGSSVHGSWTP*APERPW
Trigger: CCAAGGCCGCTCTGGAGCCCAAGGAGTCCAGGAGCC...GTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp AGATGGCAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCGGCTCCTGGACTCCTTaGGCTCCAGAGCGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: RWQHCFIRPGQPGADTRLGSWTP*APERPW
Trigger: CCAAGGCCGCTCTGGAGCCCAAGGAGTCCAGGAGCC...GAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTGCCATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp GATGGCAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCTGCTGCGGGCTCCTaGACTCCTTGGGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: DGNTALLGRASQEQTHGSSAAGS*TPWAPE
Trigger: CTCTGGAGCCCAAGGAGTCCAGGAGCCCGCAGCAGA...GGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTGCCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp TTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCAGCTCTGCCAGGGGTCTaGAGTCTCCTTCACGCAGGA +
Preference number: 4 (lower is better)
Translates to: LGRASQEQTHGSSVHIPPALPGV*SLLHAG
Trigger: TCCTGCGTGAAGGAGACTCCAGACCCCTGGCAGAGC...TGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp CAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTCGGCAGCCAGGTACCACTaGTGGAAGTCCTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: QPGADTRLLSTHSPTPASAARYH*WKSCSL
Trigger: CAAGCTGCAGGACTTCCACCAGTGGTACCTGGCTGC...CGAGGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp GATGGCAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCAGGGAATCCTCCAGGTaGTCCTCCTCTGCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: DGNTALLGRASQEQTHGSRESSR*SSSAGR
Trigger: GCGGCCTGCAGAGGAGGACCACCTGGAGGATTCCCT...GGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTGCCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp ATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCCAGTCCCTGATGCGCTaGCTCAGCTCTGTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: IRPGQPGADTRLLSTHSPQSLMR*LSSVSW
Trigger: CCAGGAGACAGAGCTGAGCCAGCGCATCAGGGACTG...GGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAAT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR CCA 90 bp TTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACAGTCCCTGATGCGCTaGCTCAGCTCTGTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LGRASQEQTHGSSVHIPPQSLMR*LSSVSW
Trigger: CCAGGAGACAGAGCTGAGCCAGCGCATCAGGGACTG...TGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR CCA 90 bp TTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCAGCAGGGAGGCCAGCATaGAACGACACACCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: LGRASQEQTHGSSVHIPPAGRPA*NDTPRR
Trigger: CCTTCGAGGTGTGTCGTTCCATGCTGGCCTCCCTGC...TGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR CCA 90 bp AGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTCGGCCACTGTGTAGTCATTaGCCAGCTGCAGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SQEQTHGSSVHIPPPLPRPLCSH*PAAGRP
Trigger: TGGCCTCCCTGCAGCTGGCCAATGACTACACAGTGG...CCGAGGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000420993.7
ENST00000522304.1
CDS-3UTR CCA 90 bp GCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTCCACTGTGTAGTCATTaGCCAGCTGCAGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: ASQEQTHGSSVHIPPPLPPLCSH*PAAGRP
Trigger: TGGCCTCCCTGCAGCTGGCCAATGACTACACAGTGG...AGGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000420993.7
ENST00000522304.1
CDS-3UTR CCA 90 bp TGGGTCCTTCAGATGGGTGGCTGGTCTCAAGTCGCAGGGGCAGCCCAGGCACTGGCAGTCTCAGGGACATaGTGTCCACGGCCATCTCCA +
Preference number: 4 (lower is better)
Translates to: WVLQMGGWSQVAGAAQALAVSGT*CPRPSP
Trigger: TGGAGATGGCCGTGGACACCATGTCCCTGAGACTGC...CAGTGCCTGGGCTGCCCCTGCGACTTGAGACCAGCCACCCATCTGAAGGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CCA 90 bp GGCAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCACGCTTGTGCGCTCGCTaGTGCGTGAGCAGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: GNTALLGRASQEQTHGSSRLCAR*CVSSLR
Trigger: CCTGAGACTGCTCACGCACCAGCGAGCGCACAAGCG...TGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR CCA 90 bp CACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACTCAGGGCTGGGCCATaGAGGGGGCAGCGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: HCFIRPGQPGADTRLLSTLRAGP*RGQRRS
Trigger: AGACCTACGCTGCCCCCTCCATGGCCCAGCCCTGAG...TGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR CCA 90 bp CAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTCTCAGGGCTGGGCCATaGAGGGGGCAGCGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: QHCFIRPGQPGADTRLLSLRAGP*RGQRRS
Trigger: AGACCTACGCTGCCCCCTCCATGGCCCAGCCCTGAG...ACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR CCA 90 bp CAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTCGACGACGTTGAAGCCATaGCCCGCTACGTCCAGGACT +
Preference number: 4 (lower is better)
Translates to: QPGADTRLLSTHSPTPASTTLKP*PATSRT
Trigger: AGTCCTGGACGTAGCGGGCCATGGCTTCAACGTCGT...CGAGGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CCA 90 bp CATGGCCCGCTACGTCCAGGACTTCCACCCAAGACTGTTGGGTCTGACCGGCTCCTGTCTTCATCACTGTaGACCCCGAGCGGGACGACG +
Preference number: 4 (lower is better)
Translates to: HGPLRPGLPPKTVGSDRLLSSSL*TPSGTT
Trigger: CGTCGTCCCGCTCGGGGTCCACAGTGATGAAGACAG...GAGCCGGTCAGACCCAACAGTCTTGGGTGGAAGTCCTGGACGTAGCGGGCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CCA 90 bp GTCAGCAAGAGGTTCACCTTGCTGAGGTGCAGGTGCAGGGCAGGGTGCGGTGACGCTGGAAGCAGAGCCTaGTTTGCCTCCAGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: VSKRFTLLRCRCRAGCGDAGSRA*FASSAA
Trigger: GGCTGCACTGGAGGCAAACCAGGCTCTGCTTCCAGC...GTCACCGCACCCTGCCCTGCACCTGCACCTCAGCAAGGTGAACCTCTTGCTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CCA 90 bp CAGCTGCAAATGCCTGTTAAGCCTGAACGTGGGCTGGGTCCTTCAGATGGGTGGTGCGCCAGGCAGCTGTaGGCCAGGGCGACTTCCACC +
Preference number: 4 (lower is better)
Translates to: QLQMPVKPERGLGPSDGWCARQL*ARATST
Trigger: GGTGGAAGTCGCCCTGGCCCACAGCTGCCTGGCGCA...CCACCCATCTGAAGGACCCAGCCCACGTTCAGGCTTAACAGGCATTTGCAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CCA 90 bp CTCCAGTGCAGCCTGTCTTCATCACTGTGGACCCCGAGCGGGACGACGTTGAAGCGGAGCCCCACAGCTTaGCACAGGCTCTCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: LQCSLSSSLWTPSGTTLKRSPTA*HRLSQL
Trigger: GAGCTGAGAGAGCCTGTGCCAAGCTGTGGGGCTCCG...CTTCAACGTCGTCCCGCTCGGGGTCCACAGTGATGAAGACAGGCTGCACTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CCA 90 bp AACGTGGGCTGGGTCCTTCAGATGGGTGGCTGGTCTCAAGTCGCAGGGGCAGCCGCTGGGTCCTTCAGATaGGTGGCTGGTCTCAAGTCG +
Preference number: 4 (lower is better)
Translates to: NVGWVLQMGGWSQVAGAAAGSFR*VAGLKS
Trigger: CGACTTGAGACCAGCCACCCATCTGAAGGACCCAGC...GGCTGCCCCTGCGACTTGAGACCAGCCACCCATCTGAAGGACCCAGCCCACGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR CAA 72 bp GCGGCGGCACATGGCGGCTTTCCGCAGTGTCCTGTCTaGAGCCACTGCAGTCTGGGCCCCATCATTAAACGG +
Preference number: 4 (lower is better)
Translates to: AAAHGGFPQCPV*SHCSLGPIIKR
Trigger: CCGTTTAATGATGGGGCCCAGACTGCAGTGGCTCAAGACAGGACACTGCGGAAAGCCGCCATGTGCCGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR CAA 72 bp CTGTCTTCATCACTGTGGACCCCGAGCGGGACGACGTaGAAGCCATGGCCCGCTACGTCCAGGACTTCCACC +
Preference number: 4 (lower is better)
Translates to: LSSSLWTPSGTT*KPWPATSRTST
Trigger: GGTGGAAGTCCTGGACGTAGCGGGCCATGGCTTCAACGTCGTCCCGCTCGGGGTCCACAGTGATGAAGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR TCA 90 bp GGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCGGCCTGGTAGACGAGTaGGTAGAGGTATTCCACCTT +
Preference number: 4 (lower is better)
Translates to: GQPGADTRLLSTHSPTPAGLVDE*VEVFHL
Trigger: AAGGTGGAATACCTCTACTCACTCGTCTACCAGGCC...GGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR TCA 90 bp GGCAACCCCATTGGCCCTGTCCTCCTGCACCGAAGAGAGCTGCTTGGCCCGCCTGGCCTGGTAGACGAGTaGGTAGAGGTATTCCACCTT +
Preference number: 4 (lower is better)
Translates to: GNPIGPVLLHRRELLGPPGLVDE*VEVFHL
Trigger: AAGGTGGAATACCTCTACTCACTCGTCTACCAGGCC...AGGCGGGCCAAGCAGCTCTCTTCGGTGCAGGAGGACAGGGCCAATGGGGTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
CDS-3UTR TCA 90 bp CTCAGGGCTGGGCCATGGAGGGGGCAGCGTAGGTCTGGAAGCGCTTGTGCGCTCGCCTCTTTCCAGAGATaGAATCAAGGGCCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: LRAGPWRGQRRSGSACALASFQR*NQGPGR
Trigger: TCTACCAGGCCCTTGATTTCATCTCTGGAAAGAGGC...GAGCGCACAAGCGCTTCCAGACCTACGCTGCCCCCTCCATGGCCCAGCCCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395701.7
CDS-3UTR TCA 90 bp CGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGACCTCACTGGGCGTCTaGTCATTCTTGAGATCCACG +
Preference number: 4 (lower is better)
Translates to: RASQEQTHGSSVHIPPPLTSLGV*SFLRST
Trigger: CGTGGATCTCAAGAATGATCAGACGCCCAGTGAGGT...CAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR TCA 90 bp CGCCTTGGCAACCGGCGGCCATCCCAGGTTGCCGTGAGCTCGACAGGGCTCAAAACCTCACTGGGCGTCTaGTCATTCTTGAGATCCACG +
Preference number: 4 (lower is better)
Translates to: RLGNRRPSQVAVSSTGLKTSLGV*SFLRST
Trigger: CGTGGATCTCAAGAATGATCAGACGCCCAGTGAGGT...TTTGAGCCCTGTCGAGCTCACGGCAACCTGGGATGGCCGCCGGTTGCCAAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR TCA 90 bp TTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCGCCAGGACCTCACCCTaGCGGCTGTACAGGGGATTG +
Preference number: 4 (lower is better)
Translates to: LLGRASQEQTHGSSVHIPARTSP*RLYRGL
Trigger: CAATCCCCTGTACAGCCGTCAGGGTGAGGTCCTGGC...GGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR TCA 90 bp AGATGGCAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCGCCAGGACCTCACCCTaGCGGCTGTACAGGGGATTG +
Preference number: 4 (lower is better)
Translates to: RWQHCFIRPGQPGADTRLARTSP*RLYRGL
Trigger: CAATCCCCTGTACAGCCGTCAGGGTGAGGTCCTGGC...GAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTGCCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR TCA 90 bp GCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCTCTGGCTCCAACATaGAGGCCCCTCTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: ALLGRASQEQTHGSSVHIPLAPT*RPLWGG
Trigger: CCCACCCCAGAGGGGCCTTCATGTTGGAGCCAGAGG...AATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR TCA 90 bp CTGGCTCCTGACGCCTGTGCTTGTTTCCAGGAGCATCAGATCCATGCTGCTGCTCCTCTGGCTCCAACATaGAGGCCCCTCTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LAPDACACFQEHQIHAAAPLAPT*RPLWGG
Trigger: CCCACCCCAGAGGGGCCTTCATGTTGGAGCCAGAGG...AGCAGCAGCATGGATCTGATGCTCCTGGAAACAAGCACAGGCGTCAGGAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR TCA 90 bp AACGTGGGCTGGGTCCTTCAGATGGGTGGCTGGTCTCAAGTCGCAGGGGCAGCCCTACCTGCTCAACCCTaGCGGCCTCTTCACGGATTA +
Preference number: 4 (lower is better)
Translates to: NVGWVLQMGGWSQVAGAALPAQP*RPLHGL
Trigger: TAATCCGTGAAGAGGCCGTCAGGGTTGAGCAGGTAG...GGCTGCCCCTGCGACTTGAGACCAGCCACCCATCTGAAGGACCCAGCCCACGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR TCA 90 bp CAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTCGTTCCCTTCTGGCTCCTaGCGCCTGTGCTTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: QPGADTRLLSTHSPTPASFPSGS*RLCLFP
Trigger: TGGAAACAAGCACAGGCGTCAGGAGCCAGAAGGGAA...CGAGGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR GCA 90 bp CACGTTAGTCCGGGAGTCAGGGAAGTCATCCAGCGACAGGAACTCATTCTCTGCAAGGGACCGCAGGGCTaGCTTCCGAGGGGTACGGCG +
Preference number: 4 (lower is better)
Translates to: HVSPGVREVIQRQELILCKGPQG*LPRGTA
Trigger: CGCCGTACCCCTCGGAAGGCAGCCCTGCGGTCCCTT...GCAGAGAATGAGTTCCTGTCGCTGGATGACTTCCCTGACTCCCGGACTAACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
CDS-3UTR GCA 90 bp TTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCAGGTCGCGGATGGGCTaGAAGAGGTGGGCGAAGCGC +
Preference number: 4 (lower is better)
Translates to: FIRPGQPGADTRLLSTHSRSRMG*KRWAKR
Trigger: GCGCTTCGCCCACCTCTTGCAGCCCATCCGCGACCT...GGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp TTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCATGCACCGAAGAGAGCTaGTTGGCCCGCCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: LGRASQEQTHGSSVHIPPCTEES*LARLFP
Trigger: TGGAAAGAGGCGGGCCAAGCAGCTCTCTTCGGTGCA...TGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp GATGGCAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCCAGGAACTCATTCTCTaGCTCCTGGGGGACCCCGGA +
Preference number: 4 (lower is better)
Translates to: DGNTALLGRASQEQTHGSQELIL*LLGDPG
Trigger: TCCGGGGTCCCCCAGGAGGCAGAGAATGAGTTCCTG...GGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTGCCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp GCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTCGGTGAAACTTCCATTGGCTaGTCCTCAGTCCTCCCGGTG +
Preference number: 4 (lower is better)
Translates to: ARSRHTAPQYTFPHPCLGETSIG*SSVLPV
Trigger: CACCGGGAGGACTGAGGAGCAGCCAATGGAAGTTTC...ACCGAGGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp GCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTCGGTCTGGGACAGGGCTCCTaGACACGGAAACTTCCATTG +
Preference number: 4 (lower is better)
Translates to: ARSRHTAPQYTFPHPCLGLGQGS*TRKLPL
Trigger: CAATGGAAGTTTCCGTGTGCAGGAGCCCTGTCCCAG...ACCGAGGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp GCGGCCATCCCAGGTTGCCGTGAGCTCGACAGGGCTCAAATCCTTGGACGCCAGCTGGGACAGGGCTCCTaGACACGGAAACTTCCATTG +
Preference number: 4 (lower is better)
Translates to: AAIPGCRELDRAQILGRQLGQGS*TRKLPL
Trigger: CAATGGAAGTTTCCGTGTGCAGGAGCCCTGTCCCAG...CTGGCGTCCAAGGATTTGAGCCCTGTCGAGCTCACGGCAACCTGGGATGGCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR GCA 90 bp GCTCTAGGCTGGGTACAGTTGACCCCGGGGGTTGAGGGAGGCAGCAATGGCCTCCTCAGGAAGCTCTACTaGCTCCTCTGCATCCTCGTC +
Preference number: 4 (lower is better)
Translates to: ALGWVQLTPGVEGGSNGLLRKLY*LLCILV
Trigger: GACGAGGATGCAGAGGAGGCAGTAGAGCTTCCTGAG...GAGGCCATTGCTGCCTCCCTCAACCCCCGGGGTCAACTGTACCCAGCCTAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR GCA 90 bp CAAATGCCTGTTAAGCCTGAACGTGGGCTGGGTCCTTCAGATGGGTGGCTGGTCCTCCTTCACGCAGGATaGAGGCTCTGGGGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: QMPVKPERGLGPSDGWLVLLHAG*RLWGPL
Trigger: GAGGGGGCCCCAGAGCCTGCATCCTGCGTGAAGGAG...GACCAGCCACCCATCTGAAGGACCCAGCCCACGTTCAGGCTTAACAGGCATTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR GCA 90 bp CAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTAAGGGGTCCAGGCTCTaGCAGGGGTCTGGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: QHCFIRPGQPGADTRLLSKGSRL*QGSGVS
Trigger: GGAGACTCCAGACCCCTGGCAGAGCCTGGACCCCTT...ACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp GATGGCAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTTCGCCGAAGCCGCCTaGTGTCGGCATGGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: DGNTALLGRASQEQTHGSFAEAA*CRHGLH
Trigger: ATGCAGACCATGCCGACAGCAGGCGGCTTCGGCGAA...GGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTGCCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp GGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCCGGAGAGTTTCCAACTaGTCCTTCACGTGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: GQPGADTRLLSTHSPTPARRVSN*SFTCVQ
Trigger: CTGGACACACGTGAAGGAGCAGTTGGAAACTCTCCG...GGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp CACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACAGGCTTCCCTGGGGTCTaGTCCCTCGGGCTCCATGTA +
Preference number: 4 (lower is better)
Translates to: HCFIRPGQPGADTRLLSTGFPGV*SLGLHV
Trigger: TACATGGAGCCCGAGGGAGCAGACCCCAGGGAAGCC...TGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp GGCAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCATCCTGGAGCAGAGGCTaGACTGTGTCCTCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: GNTALLGRASQEQTHGSSSWSRG*TVSSQS
Trigger: GGACTGGGAGGACACAGTGCAGCCTCTGCTCCAGGA...TGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR GCA 90 bp GATGGCAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTTGTGCGCTCGCTGGTaGGTGAGCAGTCTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: DGNTALLGRASQEQTHGSLCARW*VSSLRD
Trigger: GTCCCTGAGACTGCTCACGCACCAGCGAGCGCACAA...GGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTGCCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR GCA 90 bp TTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCGTCTGGAAGCGCTTGTaGGCTCGCTGGTGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: LLGRASQEQTHGSSVHIPVWKRL*ARWCVS
Trigger: GCTCACGCACCAGCGAGCGCACAAGCGCTTCCAGAC...GGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR GCA 90 bp TCTGCCCCAGACCAGTGGTCTGGGGCCAAGGCCATACCACTGTCCTCCTTGTGCTCACAGCTCAGGTTCTaGAGGCCTCCATGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: SAPDQWSGAKAIPLSSLCSQLRF*RPPCGS
Trigger: GGACCCACATGGAGGCCTGCAGAACCTGAGCTGTGA...GCACAAGGAGGACAGTGGTATGGCCTTGGCCCCAGACCACTGGTCTGGGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR GCA 90 bp TCCAGACACTCCCTCCTACCAGCCCGACTGCAGAGAGGCGCCTTGGCAACCGGCTTCAAAAGGGCTGGTTaGAGGACGGGCTGCAAGACA +
Preference number: 4 (lower is better)
Translates to: SRHSLLPARLQRGALATGFKRAG*RTGCKT
Trigger: TGTCTTGCAGCCCGTCCTGCAACCAGCCCTTTTGAA...GCCGGTTGCCAAGGCGCCTCTCTGCAGTCGGGCTGGTAGGAGGGAGTGTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR GCA 90 bp CAGGCTAGTCACAGTTACCGCGTGTACTACAATGCAGGCCCCAAGGATGAGGACAGAGGCCGGGCTCGCTaGAAGGCTGACTTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: QASHSYRVYYNAGPKDEDRGRAR*KADFRG
Trigger: GCCCCGGAAGTCAGCCTTGCAGCGAGCCCGGCCTCT...GTCCTCATCCTTGGGGCCTGCATTGTAGTACACGCGGTAACTGTGACTAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CCA 90 bp GCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTAGATACTCGCCCAGCTaGGCCGCCACGTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: ALLGRASQEQTHGSSVHIRYSPS*AATSTS
Trigger: GGAGGTGGACGTGGCGGCCCAGCTGGGCGAGTATCT...AATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp TTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCAACGCAGGCAGAGCCCTaGATCAACAACGCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: LGRASQEQTHGSSVHIPPTQAEP*INNAAS
Trigger: TGAGGCAGCGTTGTTGATCCAGGGCTCTGCCTGCGT...TGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp TCTGCCCCAGACCAGTGGTCTGGGGCCAAGGCCATACCACTGTCCTCCTTGTGCACGCAGGCAGAGCCCTaGATCAACAACGCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: SAPDQWSGAKAIPLSSLCTQAEP*INNAAS
Trigger: TGAGGCAGCGTTGTTGATCCAGGGCTCTGCCTGCGT...GCACAAGGAGGACAGTGGTATGGCCTTGGCCCCAGACCACTGGTCTGGGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CCA 90 bp ACAGAAGCTGCTCTTCAAAAGGGCTGGTTGCAGGACGGGCTGCAAGACAGGTGGCGCCCGCTGGTTCCATaGGGGACATGCCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: TEAALQKGWLQDGLQDRWRPLVP*GTCPLA
Trigger: AGCCAGAGGGCATGTCCCCCATGGAACCAGCGGGCG...CCACCTGTCTTGCAGCCCGTCCTGCAACCAGCCCTTTTGAAGAGCAGCTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CCA 90 bp AACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTAGGCTCCTGGACTCCTTaGGCTCCAGAGCGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: NTALLGRASQEQTHGSSVGSWTP*APERPW
Trigger: CCAAGGCCGCTCTGGAGCCCAAGGAGTCCAGGAGCC...TACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp GAGCATCAGATCCATGCTGCTGCTGACTCGGAGCCCCACAGCTTGGCACAGGCTGCTCTGCCAGGGGTCTaGAGTCTCCTTCACGCAGGA +
Preference number: 4 (lower is better)
Translates to: EHQIHAAADSEPHSLAQAALPGV*SLLHAG
Trigger: TCCTGCGTGAAGGAGACTCCAGACCCCTGGCAGAGC...AGCCTGTGCCAAGCTGTGGGGCTCCGAGTCAGCAGCAGCATGGATCTGATGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CCA 90 bp GACGTTGAAGCCATGGCCCGCTACGTCCAGGACTTCCACCCAAGACTGTTGGGTAGGGAATCCTCCAGGTaGTCCTCCTCTGCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: DVEAMARYVQDFHPRLLGRESSR*SSSAGR
Trigger: GCGGCCTGCAGAGGAGGACCACCTGGAGGATTCCCT...ACCCAACAGTCTTGGGTGGAAGTCCTGGACGTAGCGGGCCATGGCTTCAACGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CCA 90 bp TTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACACCACTCATTGAGCTaGGGGAACCGTGAGACCAGC +
Preference number: 4 (lower is better)
Translates to: LGRASQEQTHGSSVHIPPHHSLS*GNRETS
Trigger: GCTGGTCTCACGGTTCCCCCAGCTCAATGAGTGGTG...TGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp AGATGGCAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCGCTTGTGCGCTCGCTaGTGCGTGAGCAGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: RWQHCFIRPGQPGADTRLRLCAR*CVSSLR
Trigger: CCTGAGACTGCTCACGCACCAGCGAGCGCACAAGCG...GAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTGCCATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR CCA 90 bp AACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACTCAGGGCTGGGCCATaGAGGGGGCAGCGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: NTALLGRASQEQTHGSSVLRAGP*RGQRRS
Trigger: AGACCTACGCTGCCCCCTCCATGGCCCAGCCCTGAG...TACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR CCA 90 bp GCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCACCAGGACTACATCGTaGACCACTCCATTGCCATCT +
Preference number: 4 (lower is better)
Translates to: AGPARSRHTAPQYTFPHPTRTTS*TTPLPS
Trigger: AGATGGCAATGGAGTGGTCCACGATGTAGTCCTGGT...GGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CCA 90 bp TTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCACGAGCTGGAGAAGCTaGTGCAGGTGGTGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: LLGRASQEQTHGSSVHIPTSWRS*CRWCGS
Trigger: GCTGCCGCACCACCTGCACCAGCTTCTCCAGCTCGT...GGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CCA 90 bp AGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCGGTGTGGATGTTTGGTaGAGGTGGAGTTCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: RPGQPGADTRLLSTHSPTGVDVW*RWSSEL
Trigger: GAGCTCAGAACTCCACCTCCACCAAACATCCACACC...GGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR CAA 72 bp ATGGCCCGCTACGTCCAGGACTTCCACCCAAGACTGTaGGGTCTGACCGGCTCCACCAAACAGGTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: MARYVQDFHPRL*GLTGSTKQVAQ
Trigger: CTGGGCAACCTGTTTGGTGGAGCCGGTCAGACCCAACAGTCTTGGGTGGAAGTCCTGGACGTAGCGGGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR TCA 90 bp ACTGCAGAGAGGCGCCTTGGCAACCGGCGGCCATCCCAGGTTGCCGTGAGCTCGACAACGCTGCCTCAATaGAGTTCATTGTGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: TAERRLGNRRPSQVAVSSTTLPQ*SSLWSC
Trigger: GCAAGACCACAATGAACTTCATTGAGGCAGCGTTGT...CGAGCTCACGGCAACCTGGGATGGCCGCCGGTTGCCAAGGCGCCTCTCTGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR TCA 90 bp TGGCATGGGGGAAACGCCCGCTGGTTCCATGGGGGACATGCCCTCTGGCTCCAAGGCCTGGTAGACGAGTaGGTAGAGGTATTCCACCTT +
Preference number: 4 (lower is better)
Translates to: WHGGNARWFHGGHALWLQGLVDE*VEVFHL
Trigger: AAGGTGGAATACCTCTACTCACTCGTCTACCAGGCC...TTGGAGCCAGAGGGCATGTCCCCCATGGAACCAGCGGGCGTTTCCCCCATGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000518394.5
CDS-3UTR TCA 90 bp AGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCGCCTCTTTCCAGAGATaGAATCAAGGGCCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: RPGQPGADTRLLSTHSPTASFQR*NQGPGR
Trigger: TCTACCAGGCCCTTGATTTCATCTCTGGAAAGAGGC...GGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR TCA 90 bp GCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTTGTCCTCCCAGTCCCTaGTGCGCTGGCTCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: ALLGRASQEQTHGSSVHICPPSP*CAGSAL
Trigger: CAGAGCTGAGCCAGCGCATCAGGGACTGGGAGGACA...AATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR TCA 90 bp GATGGCAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCAGGGACACCACTCATTaGGCTGGGGGAACCGTGAGA +
Preference number: 4 (lower is better)
Translates to: DGNTALLGRASQEQTHGSRDTTH*AGGTVR
Trigger: TCTCACGGTTCCCCCAGCTCAATGAGTGGTGTCCCT...GGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTGCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp CTTGAGATCCACGTTAGTCCGGGAGTCAGGGAAGTCATCCAGCGACAGGAACTCAGGTCGCGGATGGGCTaGAAGAGGTGGGCGAAGCGC +
Preference number: 4 (lower is better)
Translates to: LEIHVSPGVREVIQRQELRSRMG*KRWAKR
Trigger: GCGCTTCGCCCACCTCTTGCAGCCCATCCGCGACCT...GAGTTCCTGTCGCTGGATGACTTCCCTGACTCCCGGACTAACGTGGATCTCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
CDS-3UTR GCA 90 bp ATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCGAAACTTCCATTGGCTaGTCCTCAGTCCTCCCGGTG +
Preference number: 4 (lower is better)
Translates to: IRPGQPGADTRLLSTHSPETSIG*SSVLPV
Trigger: CACCGGGAGGACTGAGGAGCAGCCAATGGAAGTTTC...GGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp TGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATAGGGCAGCACTCTGCTaGGGGCTCCTGGACTCCTTG +
Preference number: 4 (lower is better)
Translates to: CFIRPGQPGADTRLLSTHRAALC*GLLDSL
Trigger: CAAGGAGTCCAGGAGCCCGCAGCAGAGTGCTGCCCT...ATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp CACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACACTGGTGGAAGTCCTaGAGCTTGGCAGCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: HCFIRPGQPGADTRLLSTHWWKS*SLAAPF
Trigger: GAAGGGCGCTGCCAAGCTGCAGGACTTCCACCAGTG...TGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp AACGTGGGCTGGGTCCTTCAGATGGGTGGCTGGTCTCAAGTCGCAGGGGCAGCCCGGAGAGTTTCCAACTaGTCCTTCACGTGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: NVGWVLQMGGWSQVAGAARRVSN*SFTCVQ
Trigger: CTGGACACACGTGAAGGAGCAGTTGGAAACTCTCCG...GGCTGCCCCTGCGACTTGAGACCAGCCACCCATCTGAAGGACCCAGCCCACGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR GCA 90 bp TTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCATCAAAGGGCACATGCTaGTCCTGCTCCTGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LGRASQEQTHGSSVHIPPSKGTC*SCSWSR
Trigger: TCTGCTCCAGGAGCAGGAGCAGCATGTGCCCTTTGA...TGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp GCAGATCGGCTGAGCAGATCTCAGACAGTGTGCGGCGGCACATGGCGGCTTTCCTCAAAGGGCACATGCTaGTCCTGCTCCTGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: ADRLSRSQTVCGGTWRLSSKGTC*SCSWSR
Trigger: TCTGCTCCAGGAGCAGGAGCAGCATGTGCCCTTTGA...GGAAAGCCGCCATGTGCCGCCGCACACTGTCTGAGATCTGCTCAGCCGATCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR GCA 90 bp TTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCGTCTGGAAGCGCTTGTaGGCTCGCTGGTGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: FIRPGQPGADTRLLSTHSVWKRL*ARWCVS
Trigger: GCTCACGCACCAGCGAGCGCACAAGCGCTTCCAGAC...GGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR GCA 90 bp AACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTAGTCTGGAAGCGCTTGTaGGCTCGCTGGTGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: NTALLGRASQEQTHGSSVVWKRL*ARWCVS
Trigger: GCTCACGCACCAGCGAGCGCACAAGCGCTTCCAGAC...TACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR GCA 90 bp AGCGGGACGACGTTGAAGCCATGGCCCGCTACGTCCAGGACTTCCACCCAAGACCGTGGACCACTCCATTaGCATCTACCTGCTCAACCC +
Preference number: 4 (lower is better)
Translates to: SGTTLKPWPATSRTSTQDRGPLH*HLPAQP
Trigger: GGGTTGAGCAGGTAGATGGCAATGGAGTGGTCCACG...GTCTTGGGTGGAAGTCCTGGACGTAGCGGGCCATGGCTTCAACGTCGTCCCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CCA 90 bp TCTTCACGGATTACTACGGCCGGAGCAGATCGGCTGAGCAGATCTCAGACAGTGAGATACTCGCCCAGCTaGGCCGCCACGTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: SSRITTAGADRLSRSQTVRYSPS*AATSTS
Trigger: GGAGGTGGACGTGGCGGCCCAGCTGGGCGAGTATCT...CACTGTCTGAGATCTGCTCAGCCGATCTGCTCCGGCCGTAGTAATCCGTGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CCA 90 bp CCCAGGCTAGTCACAGTTACCGCGTGTACTACAATGCAGGCCCCAAGGATGAGGGGGGGACATGCCCTCTaGCTCCAACATGAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: PRLVTVTACTTMQAPRMRGGHAL*LQHEGP
Trigger: GGGGCCTTCATGTTGGAGCCAGAGGGCATGTCCCCC...CCTCATCCTTGGGGCCTGCATTGTAGTACACGCGGTAACTGTGACTAGCCTGGG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CCA 90 bp TTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCTCCCGGTGTCCTTCTaGGTCCCTGGCATGGGGGAA +
Preference number: 4 (lower is better)
Translates to: FIRPGQPGADTRLLSTHSLPVSF*VPGMGE
Trigger: TTCCCCCATGCCAGGGACCCAGAAGGACACCGGGAG...GGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp GTGGTCTGGGGCCAAGGCCATACCACTGTCCTCCTTGTGCAAGGTGACTCGGCCCACGGAAACTTCCATTaGCTGCTCCTCAGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: VVWGQGHTTVLLVQGDSAHGNFH*LLLSPP
Trigger: GGGAGGACTGAGGAGCAGCCAATGGAAGTTTCCGTG...GGCCGAGTCACCTTGCACAAGGAGGACAGTGGTATGGCCTTGGCCCCAGACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CCA 90 bp TGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATGGAGAAGCCGAGTGCTaGGACAGGGCTCCTGCACAC +
Preference number: 4 (lower is better)
Translates to: CFIRPGQPGADTRLLSTHGEAEC*DRAPAH
Trigger: GTGTGCAGGAGCCCTGTCCCAGCACTCGGCTTCTCC...ATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp GCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTTTCTGGAGAGGGGCCTaGCTCCTGGGAGAAGCCGAG +
Preference number: 4 (lower is better)
Translates to: ALLGRASQEQTHGSSVHIFWRGA*LLGEAE
Trigger: CTCGGCTTCTCCCAGGAGCCAGGCCCCTCTCCAGAA...AATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp TGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTTCTGGAGAGGGGCCTaGCTCCTGGGAGAAGCCGAG +
Preference number: 4 (lower is better)
Translates to: CFIRPGQPGADTRLLSTHFWRGA*LLGEAE
Trigger: CTCGGCTTCTCCCAGGAGCCAGGCCCCTCTCCAGAA...ATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp CACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACAGCAGCATGTACCTCCTaGGCAGGGCAGCACTCTGCT +
Preference number: 4 (lower is better)
Translates to: HCFIRPGQPGADTRLLSTAACTS*AGQHSA
Trigger: AGCAGAGTGCTGCCCTGCCCAGGAGGTACATGCTGC...TGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp ACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACCAGTCCCTGATGCGCTaGCTCAGCTCTGTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: TALLGRASQEQTHGSSVHQSLMR*LSSVSW
Trigger: CCAGGAGACAGAGCTGAGCCAGCGCATCAGGGACTG...GTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR CCA 90 bp ACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACGCAGGGAGGCCAGCATaGAACGACACACCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: TALLGRASQEQTHGSSVHAGRPA*NDTPRR
Trigger: CCTTCGAGGTGTGTCGTTCCATGCTGGCCTCCCTGC...GTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR CCA 90 bp GATGGCAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCCCACTGTGTAGTCATTaGCCAGCTGCAGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: DGNTALLGRASQEQTHGSPLCSH*PAAGRP
Trigger: TGGCCTCCCTGCAGCTGGCCAATGACTACACAGTGG...GGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTGCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000420993.7
ENST00000522304.1
CDS-3UTR CCA 90 bp AGGACTACATCGTGGACCACTCCATTGCCATCTACCTGCTCAACCCTGACGGCCCGCTTGTGCGCTCGCTaGTGCGTGAGCAGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: RTTSWTTPLPSTCSTLTARLCAR*CVSSLR
Trigger: CCTGAGACTGCTCACGCACCAGCGAGCGCACAAGCG...GGCCGTCAGGGTTGAGCAGGTAGATGGCAATGGAGTGGTCCACGATGTAGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CCA 90 bp CAAATGCCTGTTAAGCCTGAACGTGGGCTGGGTCCTTCAGATGGGTGGCTGGTCGCGACTTCCACCTGCTaGATCACAGAGGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: QMPVKPERGLGPSDGWLVATSTC*ITEAGL
Trigger: GAGCCCGGCCTCTGTGATCCAGCAGGTGGAAGTCGC...GACCAGCCACCCATCTGAAGGACCCAGCCCACGTTCAGGCTTAACAGGCATTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR TCA 90 bp GGCAACCCCATTGGCCCTGTCCTCCTGCACCGAAGAGAGCTGCTTGGCCCGCCTACAACGCTGCCTCAATaGAGTTCATTGTGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: GNPIGPVLLHRRELLGPPTTLPQ*SSLWSC
Trigger: GCAAGACCACAATGAACTTCATTGAGGCAGCGTTGT...AGGCGGGCCAAGCAGCTCTCTTCGGTGCAGGAGGACAGGGCCAATGGGGTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
CDS-3UTR TCA 90 bp CCATCCCAGGTTGCCGTGAGCTCGACAGGGCTCAAATCCTTGGACGCCAGCCCAGGCCTGGTAGACGAGTaGGTAGAGGTATTCCACCTT +
Preference number: 4 (lower is better)
Translates to: PSQVAVSSTGLKSLDASPGLVDE*VEVFHL
Trigger: AAGGTGGAATACCTCTACTCACTCGTCTACCAGGCC...TGGGCTGGCGTCCAAGGATTTGAGCCCTGTCGAGCTCACGGCAACCTGGGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR TCA 90 bp GTCAGCAAGAGGTTCACCTTGCTGAGGTGCAGGTGCAGGGCAGGGTGCGGTGACGGCCTGGTAGACGAGTaGGTAGAGGTATTCCACCTT +
Preference number: 4 (lower is better)
Translates to: VSKRFTLLRCRCRAGCGDGLVDE*VEVFHL
Trigger: AAGGTGGAATACCTCTACTCACTCGTCTACCAGGCC...GTCACCGCACCCTGCCCTGCACCTGCACCTCAGCAAGGTGAACCTCTTGCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR TCA 90 bp TGGCATGGGGGAAACGCCCGCTGGTTCCATGGGGGACATGCCCTCTGGCTCCAAGCCTCTTTCCAGAGATaGAATCAAGGGCCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: WHGGNARWFHGGHALWLQASFQR*NQGPGR
Trigger: TCTACCAGGCCCTTGATTTCATCTCTGGAAAGAGGC...TTGGAGCCAGAGGGCATGTCCCCCATGGAACCAGCGGGCGTTTCCCCCATGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000518394.5
CDS-3UTR TCA 90 bp TTCTTGAGATCCACGTTAGTCCGGGAGTCAGGGAAGTCATCCAGCGACAGGAACCCTCTGGCTCCAACATaGAGGCCCCTCTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: FLRSTLVRESGKSSSDRNPLAPT*RPLWGG
Trigger: CCCACCCCAGAGGGGCCTTCATGTTGGAGCCAGAGG...GTTCCTGTCGCTGGATGACTTCCCTGACTCCCGGACTAACGTGGATCTCAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518394.5
CDS-3UTR TCA 90 bp TTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCAAGACTGTTGGGTCTaGCCGGCTCCACCAAACAGG +
Preference number: 4 (lower is better)
Translates to: LLGRASQEQTHGSSVHIPQDCWV*PAPPNR
Trigger: CCTGTTTGGTGGAGCCGGTCAGACCCAACAGTCTTG...GGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR GCA 90 bp AGATGGCAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCTTGGCCCTGTCCTCCTaGACCGAAGAGAGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: RWQHCFIRPGQPGADTRLLALSS*TEESCL
Trigger: CAAGCAGCTCTCTTCGGTGCAGGAGGACAGGGCCAA...GAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTGCCATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp TGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATCAGGAACTCATTCTCTaGCTCCTGGGGGACCCCGGA +
Preference number: 4 (lower is better)
Translates to: CFIRPGQPGADTRLLSTHQELIL*LLGDPG
Trigger: TCCGGGGTCCCCCAGGAGGCAGAGAATGAGTTCCTG...ATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp CAGCTGCAAATGCCTGTTAAGCCTGAACGTGGGCTGGGTCCTTCAGATGGGTGGCAGCGCCCTTCCTCTTaGGCTTCTGTCCCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: QLQMPVKPERGLGPSDGWQRPSS*ASVPEP
Trigger: AGGCTCTGGGACAGAAGCGCAAGAGGAAGGGCGCTG...CCACCCATCTGAAGGACCCAGCCCACGTTCAGGCTTAACAGGCATTTGCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR GCA 90 bp AGGACTACATCGTGGACCACTCCATTGCCATCTACCTGCTCAACCCTGACGGCCCACTGGTGGAAGTCCTaGAGCTTGGCAGCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: RTTSWTTPLPSTCSTLTAHWWKS*SLAAPF
Trigger: GAAGGGCGCTGCCAAGCTGCAGGACTTCCACCAGTG...GGCCGTCAGGGTTGAGCAGGTAGATGGCAATGGAGTGGTCCACGATGTAGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR GCA 90 bp GCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTTTCGCCGAAGCCGCCTaGTGTCGGCATGGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: ALLGRASQEQTHGSSVHIFAEAA*CRHGLH
Trigger: ATGCAGACCATGCCGACAGCAGGCGGCTTCGGCGAA...AATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp AACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTAGCCACCTCCCTCCTCTaGAGCTTCCGGAGAGTTTCC +
Preference number: 4 (lower is better)
Translates to: NTALLGRASQEQTHGSSVATSLL*SFRRVS
Trigger: GGAAACTCTCCGGAAGCTGCAGAGGAGGGAGGTGGC...TACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp GAGGACCAGGACTACATCGTGGACCACTCCATTGCCATCTACCTGCTCAACCCTGGCTTCCCTGGGGTCTaGTCCCTCGGGCTCCATGTA +
Preference number: 4 (lower is better)
Translates to: EDQDYIVDHSIAIYLLNPGFPGV*SLGLHV
Trigger: TACATGGAGCCCGAGGGAGCAGACCCCAGGGAAGCC...AGGGTTGAGCAGGTAGATGGCAATGGAGTGGTCCACGATGTAGTCCTGGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR GCA 90 bp GATGGCAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCATGTCAAAGGGCACATaGTGCTCCTGCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: DGNTALLGRASQEQTHGSMSKGT*CSCSWS
Trigger: GCTCCAGGAGCAGGAGCAGCATGTGCCCTTTGACAT...GGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTGCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp TGGCAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCATGTCAAAGGGCACATaGTGCTCCTGCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: WQHCFIRPGQPGADTRLLMSKGT*CSCSWS
Trigger: GCTCCAGGAGCAGGAGCAGCATGTGCCCTTTGACAT...GAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp ATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCGTTCTGGCGCCATTTTaGTGTTCCCGCCCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: IRPGQPGADTRLLSTHSPVLAPF*CSRPGK
Trigger: TTTTCCTGGGCGGGAACAGCAAAATGGCGCCAGAAC...GGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR GCA 90 bp TTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCACTGCCCTGACATCTaGCCAGACGAGCTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LLGRASQEQTHGSSVHIPHCPDI*PDELEK
Trigger: CTTCTCCAGCTCGTCTGGGCAGATGTCAGGGCAGTG...GGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR GCA 90 bp GAGCAGATCTCAGACAGTGTGCGGCGGCACATGGCGGCTTTCCGCAGTGTCCTGAGTGACAGGTGTGGTTaGCCAGGTGTGGATGTTTGG +
Preference number: 4 (lower is better)
Translates to: EQISDSVRRHMAAFRSVLSDRCG*PGVDVW
Trigger: CCAAACATCCACACCTGGGCAACCACACCTGTCACT...CAGGACACTGCGGAAAGCCGCCATGTGCCGCCGCACACTGTCTGAGATCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR GCA 90 bp CTCCTGACGCCTGTGCTTGTTTCCAGGAGCATCAGATCCATGCTGCTGCTGACTTTGCTGAGGTGCAGGTaGAGGGCAGGGTGCGGTGAC +
Preference number: 4 (lower is better)
Translates to: LLTPVLVSRSIRSMLLLTLLRCR*RAGCGD
Trigger: GTCACCGCACCCTGCCCTGCACCTGCACCTCAGCAA...AGTCAGCAGCAGCATGGATCTGATGCTCCTGGAAACAAGCACAGGCGTCAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR GCA 90 bp AACGTGGGCTGGGTCCTTCAGATGGGTGGCTGGTCTCAAGTCGCAGGGGCAGCCGGCATGCACTTGGAATaGTTTCCGTCAGCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: NVGWVLQMGGWSQVAGAAGMHLE*FPSARG
Trigger: ACCTCTTGCTGACGGAAAGCATTCCAAGTGCATGCC...GGCTGCCCCTGCGACTTGAGACCAGCCACCCATCTGAAGGACCCAGCCCACGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR GCA 90 bp AGATGGCAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCACCACTCATTGAGCTaGTCCTGGAGCAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: RWQHCFIRPGQPGADTRLHHSLS*SWSRGC
Trigger: GCAGCCTCTGCTCCAGGAGCAGCTCAATGAGTGGTG...GAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTGCCATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522304.1
CDS-3UTR CCA 90 bp TCCACGTTAGTCCGGGAGTCAGGGAAGTCATCCAGCGACAGGAACTCATTCTCTATGGGCTGCAAGAGGTaGGCGAAGCGCGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: STLVRESGKSSSDRNSFSMGCKR*AKRAST
Trigger: CGTGGAGGCGCGCTTCGCCCACCTCTTGCAGCCCAT...AGAGAATGAGTTCCTGTCGCTGGATGACTTCCCTGACTCCCGGACTAACGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
CDS-3UTR CCA 90 bp CACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACAACGCAGGCAGAGCCCTaGATCAACAACGCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: HCFIRPGQPGADTRLLSTTQAEP*INNAAS
Trigger: TGAGGCAGCGTTGTTGATCCAGGGCTCTGCCTGCGT...TGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp GAGGACCTCACTGGGCGTCTGATCATTCTTGAGATCCACGTTAGTCCGGGAGTCGGGGGACATGCCCTCTaGCTCCAACATGAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: EDLTGRLIILEIHVSPGVGGHAL*LQHEGP
Trigger: GGGGCCTTCATGTTGGAGCCAGAGGGCATGTCCCCC...GACTCCCGGACTAACGTGGATCTCAAGAATGATCAGACGCCCAGTGAGGTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518394.5
CDS-3UTR CCA 90 bp TCCACGTTAGTCCGGGAGTCAGGGAAGTCATCCAGCGACAGGAACTCATTCTCTCGCCCGCTGGTTCCATaGGGGACATGCCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: STLVRESGKSSSDRNSFSRPLVP*GTCPLA
Trigger: AGCCAGAGGGCATGTCCCCCATGGAACCAGCGGGCG...AGAGAATGAGTTCCTGTCGCTGGATGACTTCCCTGACTCCCGGACTAACGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518394.5
CDS-3UTR CCA 90 bp TTCTTGAGATCCACGTTAGTCCGGGAGTCAGGGAAGTCATCCAGCGACAGGAACGGGGGAAACGCCCGCTaGTTCCATGGGGGACATGCC +
Preference number: 4 (lower is better)
Translates to: FLRSTLVRESGKSSSDRNGGNAR*FHGGHA
Trigger: GGCATGTCCCCCATGGAACCAGCGGGCGTTTCCCCC...GTTCCTGTCGCTGGATGACTTCCCTGACTCCCGGACTAACGTGGATCTCAAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000518394.5
CDS-3UTR CCA 90 bp AACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTAGCAGCATGTACCTCCTaGGCAGGGCAGCACTCTGCT +
Preference number: 4 (lower is better)
Translates to: NTALLGRASQEQTHGSSVAACTS*AGQHSA
Trigger: AGCAGAGTGCTGCCCTGCCCAGGAGGTACATGCTGC...TACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp CACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACACCACTCATTGAGCTaGGGGAACCGTGAGACCAGC +
Preference number: 4 (lower is better)
Translates to: HCFIRPGQPGADTRLLSTHHSLS*GNRETS
Trigger: GCTGGTCTCACGGTTCCCCCAGCTCAATGAGTGGTG...TGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp AACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTAGCAGGGAGGCCAGCATaGAACGACACACCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: NTALLGRASQEQTHGSSVAGRPA*NDTPRR
Trigger: CCTTCGAGGTGTGTCGTTCCATGCTGGCCTCCCTGC...TACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR CCA 90 bp TTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCGCAGTCTCAGGGACATaGTGTCCACGGCCATCTCCA +
Preference number: 4 (lower is better)
Translates to: LLGRASQEQTHGSSVHIPAVSGT*CPRPSP
Trigger: TGGAGATGGCCGTGGACACCATGTCCCTGAGACTGC...GGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR CCA 90 bp GGCAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCACCACTGTGTAGTCATTaGCCTGCAGGGGTGGCACAT +
Preference number: 4 (lower is better)
Translates to: GNTALLGRASQEQTHGSSPLCSH*PAGVAH
Trigger: ATGTGCCACCCCTGCAGGCCAATGACTACACAGTGG...TGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395701.7
CDS-3UTR TCA 90 bp CTCACTGGGCGTCTGATCATTCTTGAGATCCACGTTAGTCCGGGAGTCAGGGAACCTCCCAGTTCTTGGTaGGGTCGCGGATGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LTGRLIILEIHVSPGVREPPSSW*GRGWAA
Trigger: TGCAGCCCATCCGCGACCTCACCAAGAACTGGGAGG...TTCCCTGACTCCCGGACTAACGTGGATCTCAAGAATGATCAGACGCCCAGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
CDS-3UTR TCA 90 bp ACCACTCCATTGCCATCTACCTGCTCAACCCTGACGGCCTCTTCACGGATTACTCCTCCCAGTTCTTGGTaGGGTCGCGGATGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: TTPLPSTCSTLTASSRITPPSSW*GRGWAA
Trigger: TGCAGCCCATCCGCGACCTCACCAAGAACTGGGAGG...AGTAATCCGTGAAGAGGCCGTCAGGGTTGAGCAGGTAGATGGCAATGGAGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR TCA 90 bp GGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCAAAGAAATGCAGATCTaGTCCAGCTCCTCCAGATAC +
Preference number: 4 (lower is better)
Translates to: GPARSRHTAPQYTFPHPCKEMQI*SSSSRY
Trigger: GTATCTGGAGGAGCTGGATCAGATCTGCATTTCTTT...GCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR TCA 90 bp ATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCGCCTCTTTCCAGAGATaGAATCAAGGGCCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: IRPGQPGADTRLLSTHSPASFQR*NQGPGR
Trigger: TCTACCAGGCCCTTGATTTCATCTCTGGAAAGAGGC...GGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR TCA 90 bp TTCTTGAGATCCACGTTAGTCCGGGAGTCAGGGAAGTCATCCAGCGACAGGAACGCCAGGACCTCACCCTaGCGGCTGTACAGGGGATTG +
Preference number: 4 (lower is better)
Translates to: FLRSTLVRESGKSSSDRNARTSP*RLYRGL
Trigger: CAATCCCCTGTACAGCCGTCAGGGTGAGGTCCTGGC...GTTCCTGTCGCTGGATGACTTCCCTGACTCCCGGACTAACGTGGATCTCAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518394.5
CDS-3UTR TCA 90 bp TTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCGGGGCCAGTGGGTGCTaGTGTACTTTGGCTTCACTC +
Preference number: 4 (lower is better)
Translates to: FIRPGQPGADTRLLSTHSGASGC*CTLASL
Trigger: GAGTGAAGCCAAAGTACATCAGCACCCACTGGCCCC...GGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR TCA 90 bp CTTCCGGCTGGCCAGGACCTCACCCTGACGGCTGTACAGGGGATTGTTGTTCTTAAAGAAATGCAGATCTaGTCCAGCCAGCTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: LPAGQDLTLTAVQGIVVLKEMQI*SSQLGR
Trigger: GCGGCCCAGCTGGCTGGATCAGATCTGCATTTCTTT...AAGAACAACAATCCCCTGTACAGCCGTCAGGGTGAGGTCCTGGCCAGCCGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518394.5
CDS-3UTR GCA 90 bp GTAGACGCAGGCAGAGCCCTGGATCAACAACGCTGCCTCAATGAAGTTCATTGTAGGTCGCGGATGGGCTaGAAGAGGTGGGCGAAGCGC +
Preference number: 4 (lower is better)
Translates to: VDAGRALDQQRCLNEVHCRSRMG*KRWAKR
Trigger: GCGCTTCGCCCACCTCTTGCAGCCCATCCGCGACCT...ACAATGAACTTCATTGAGGCAGCGTTGTTGATCCAGGGCTCTGCCTGCGTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
CDS-3UTR GCA 90 bp GCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTTTGGCCCTGTCCTCCTaGACCGAAGAGAGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: ALLGRASQEQTHGSSVHILALSS*TEESCL
Trigger: CAAGCAGCTCTCTTCGGTGCAGGAGGACAGGGCCAA...AATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp CACGTTAGTCCGGGAGTCAGGGAAGTCATCCAGCGACAGGAACTCATTCTCTGCCAGGAACTCATTCTCTaGCTCCTGGGGGACCCCGGA +
Preference number: 4 (lower is better)
Translates to: HVSPGVREVIQRQELILCQELIL*LLGDPG
Trigger: TCCGGGGTCCCCCAGGAGGCAGAGAATGAGTTCCTG...GCAGAGAATGAGTTCCTGTCGCTGGATGACTTCCCTGACTCCCGGACTAACGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
CDS-3UTR GCA 90 bp GAGGACCTCACTGGGCGTCTGATCATTCTTGAGATCCACGTTAGTCCGGGAGTCCAGGAACTCATTCTCTaGCTCCTGGGGGACCCCGGA +
Preference number: 4 (lower is better)
Translates to: EDLTGRLIILEIHVSPGVQELIL*LLGDPG
Trigger: TCCGGGGTCCCCCAGGAGGCAGAGAATGAGTTCCTG...GACTCCCGGACTAACGTGGATCTCAAGAATGATCAGACGCCCAGTGAGGTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
CDS-3UTR GCA 90 bp CACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACTGGGACAGGGCTCCTaGACACGGAAACTTCCATTG +
Preference number: 4 (lower is better)
Translates to: HCFIRPGQPGADTRLLSTLGQGS*TRKLPL
Trigger: CAATGGAAGTTTCCGTGTGCAGGAGCCCTGTCCCAG...TGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp ACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACAAAGTCATCTGCTGCTaGCCCCAGGTCTTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: TALLGRASQEQTHGSSVHKVICC*PQVFQG
Trigger: TCCCTGGAAGACCTGGGGGCAGCAGCAGATGACTTT...GTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299821.15
CDS-3UTR GCA 90 bp GCTCTAGGCTGGGTACAGTTGACCCCGGGGGTTGAGGGAGGCAGCAATGGCCTCGAGGAACACAGAAGCTaGTCTTCAAAAGGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: ALGWVQLTPGVEGGSNGLEEHRS*SSKGLV
Trigger: AACCAGCCCTTTTGAAGAGCAGCTTCTGTGTTCCTC...GAGGCCATTGCTGCCTCCCTCAACCCCCGGGGTCAACTGTACCCAGCCTAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR GCA 90 bp TCATCACTGTGGACCCCGAGCGGGACGACGTTGAAGCCATGGCCCGCTACGTCCAGTTCAGGCAAGGCATaGACTTGGAATGCTTTCCGT +
Preference number: 4 (lower is better)
Translates to: SSLWTPSGTTLKPWPATSSSGKA*TWNAFR
Trigger: ACGGAAAGCATTCCAAGTGCATGCCTTGCCTGAACT...GGACGTAGCGGGCCATGGCTTCAACGTCGTCCCGCTCGGGGTCCACAGTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CCA 90 bp GTAGACGCAGGCAGAGCCCTGGATCAACAACGCTGCCTCAATGAAGTTCATTGTAGATACTCGCCCAGCTaGGCCGCCACGTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: VDAGRALDQQRCLNEVHCRYSPS*AATSTS
Trigger: GGAGGTGGACGTGGCGGCCCAGCTGGGCGAGTATCT...ACAATGAACTTCATTGAGGCAGCGTTGTTGATCCAGGGCTCTGCCTGCGTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418794.1
CDS-3UTR CCA 90 bp ACTACTCTGAGGAGCATCAGTTCTGCTCAGAGAGGGGAGGAACACAGAAGCTGCCTCCCGGTGTCCTTCTaGGTCCCTGGCATGGGGGAA +
Preference number: 4 (lower is better)
Translates to: TTLRSISSAQRGEEHRSCLPVSF*VPGMGE
Trigger: TTCCCCCATGCCAGGGACCCAGAAGGACACCGGGAG...GCAGCTTCTGTGTTCCTCCCCTCTCTGAGCAGAACTGATGCTCCTCAGAGTAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CCA 90 bp TTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCACGGAAACTTCCATTaGCTGCTCCTCAGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: LLGRASQEQTHGSSVHIPHGNFH*LLLSPP
Trigger: GGGAGGACTGAGGAGCAGCCAATGGAAGTTTCCGTG...GGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp TTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCGCCAGGTACCACTGGTaGAAGTCCTGCAGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: FIRPGQPGADTRLLSTHSARYHW*KSCSLA
Trigger: TGCCAAGCTGCAGGACTTCCACCAGTGGTACCTGGC...GGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CCA 90 bp AGGACTACATCGTGGACCACTCCATTGCCATCTACCTGCTCAACCCTGACGGCCGCCAGGTACCACTGGTaGAAGTCCTGCAGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: RTTSWTTPLPSTCSTLTAARYHW*KSCSLA
Trigger: TGCCAAGCTGCAGGACTTCCACCAGTGGTACCTGGC...GGCCGTCAGGGTTGAGCAGGTAGATGGCAATGGAGTGGTCCACGATGTAGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CCA 90 bp CTCCTGACGCCTGTGCTTGTTTCCAGGAGCATCAGATCCATGCTGCTGCTGACTTCTGCCCAGACGAGCTaGAGAAGCTGGTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LLTPVLVSRSIRSMLLLTSAQTS*RSWCRW
Trigger: CCACCTGCACCAGCTTCTCCAGCTCGTCTGGGCAGA...AGTCAGCAGCAGCATGGATCTGATGCTCCTGGAAACAAGCACAGGCGTCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CCA 90 bp AGGACTACATCGTGGACCACTCCATTGCCATCTACCTGCTCAACCCTGACGGCCCTTCAGATGGGTGGCTaGTCTCAAGTCGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: RTTSWTTPLPSTCSTLTALQMGG*SQVAGA
Trigger: TGCCCCTGCGACTTGAGACCAGCCACCCATCTGAAG...GGCCGTCAGGGTTGAGCAGGTAGATGGCAATGGAGTGGTCCACGATGTAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR TCA 90 bp AGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTCGGAAAGAAATGCAGATCTaGTCCAGCTCCTCCAGATAC +
Preference number: 4 (lower is better)
Translates to: SQEQTHGSSVHIPPPLPRKEMQI*SSSSRY
Trigger: GTATCTGGAGGAGCTGGATCAGATCTGCATTTCTTT...CCGAGGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR TCA 90 bp GTCAGCAAGAGGTTCACCTTGCTGAGGTGCAGGTGCAGGGCAGGGTGCGGTGACACAACGCTGCCTCAATaGAGTTCATTGTGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: VSKRFTLLRCRCRAGCGDTTLPQ*SSLWSC
Trigger: GCAAGACCACAATGAACTTCATTGAGGCAGCGTTGT...GTCACCGCACCCTGCCCTGCACCTGCACCTCAGCAAGGTGAACCTCTTGCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR TCA 90 bp ACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACGGCCTGGTAGACGAGTaGGTAGAGGTATTCCACCTT +
Preference number: 4 (lower is better)
Translates to: TALLGRASQEQTHGSSVHGLVDE*VEVFHL
Trigger: AAGGTGGAATACCTCTACTCACTCGTCTACCAGGCC...GTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR TCA 90 bp TTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCTCTGGGAGGTGGCGATaGAGAGCTCCACATTCCTTC +
Preference number: 4 (lower is better)
Translates to: FIRPGQPGADTRLLSTHSSGRWR*RAPHSF
Trigger: GAAGGAATGTGGAGCTCTTCATCGCCACCTCCCAGA...GGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR TCA 90 bp TGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCTGGGAGGTGGCGATaGAGAGCTCCACATTCCTTC +
Preference number: 4 (lower is better)
Translates to: CFIRPGQPGADTRLLSTHSGRWR*RAPHSF
Trigger: GAAGGAATGTGGAGCTCTTCATCGCCACCTCCCAGA...ATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS-3UTR TCA 90 bp CCCAGGCTAGTCACAGTTACCGCGTGTACTACAATGCAGGCCCCAAGGATGAGGATCTGTGTGTGTGTGTaGTCTGTACCAGCGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PRLVTVTACTTMQAPRMRICVCV*SVPAAQ
Trigger: CTGGGCCGCTGGTACAGATCACACACACACACAGAT...CCTCATCCTTGGGGCCTGCATTGTAGTACACGCGGTAACTGTGACTAGCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR GCA 90 bp GGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCCTTCGTCAAAAGAAATaGAGATCTGATCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GQPGADTRLLSTHSPTPALRQKK*RSDPAP
Trigger: AGGAGCTGGATCAGATCTGCATTTCTTTTGACGAAG...GGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp CTGGGTCCCTGGCATGGGGGAAACGCCCGCTGGTTCCATGGGGGACATGCCCTCAGTTCATTGTGGTCTTaGCTTCGTCAAAAGAAATGC +
Preference number: 4 (lower is better)
Translates to: LGPWHGGNARWFHGGHALSSLWS*LRQKKC
Trigger: GCATTTCTTTTGACGAAGGCAAGACCACAATGAACT...GAGGGCATGTCCCCCATGGAACCAGCGGGCGTTTCCCCCATGCCAGGGACCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000518394.5
CDS-3UTR GCA 90 bp AGGACTACATCGTGGACCACTCCATTGCCATCTACCTGCTCAACCCTGACGGCCCTGGGACAGGGCTCCTaGACACGGAAACTTCCATTG +
Preference number: 4 (lower is better)
Translates to: RTTSWTTPLPSTCSTLTALGQGS*TRKLPL
Trigger: CAATGGAAGTTTCCGTGTGCAGGAGCCCTGTCCCAG...GGCCGTCAGGGTTGAGCAGGTAGATGGCAATGGAGTGGTCCACGATGTAGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR GCA 90 bp TGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATCTCAGGAAGCTCTACTaGCTCCTCTGCATCCTCGTC +
Preference number: 4 (lower is better)
Translates to: CFIRPGQPGADTRLLSTHLRKLY*LLCILV
Trigger: GACGAGGATGCAGAGGAGGCAGTAGAGCTTCCTGAG...ATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp AGATGGCAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCGGAGAGTTTCCAACTaGTCCTTCACGTGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: RWQHCFIRPGQPGADTRLRRVSN*SFTCVQ
Trigger: CTGGACACACGTGAAGGAGCAGTTGGAAACTCTCCG...GAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTGCCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp AGGACTACATCGTGGACCACTCCATTGCCATCTACCTGCTCAACCCTGACGGCCATGTCAAAGGGCACATaGTGCTCCTGCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: RTTSWTTPLPSTCSTLTAMSKGT*CSCSWS
Trigger: GCTCCAGGAGCAGGAGCAGCATGTGCCCTTTGACAT...GGCCGTCAGGGTTGAGCAGGTAGATGGCAATGGAGTGGTCCACGATGTAGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR GCA 90 bp ACTACTCTGAGGAGCATCAGTTCTGCTCAGAGAGGGGAGGAACACAGAAGCTGCAGACAGGTGGGCTTCTaGCCCAGACCAGTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: TTLRSISSAQRGEEHRSCRQVGF*PRPVVW
Trigger: CCAGACCACTGGTCTGGGGCAGAAGCCCACCTGTCT...GCAGCTTCTGTGTTCCTCCCCTCTCTGAGCAGAACTGATGCTCCTCAGAGTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR GCA 90 bp TGGCAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCATGAGATGGCAACACTaGTTTATTAGGCCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: WQHCFIRPGQPGADTRLLMRWQH*FIRPGQ
Trigger: CTGGCCCGGCCTAATAAAGCAGTGTTGCCATCTCAT...GAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR GCA 90 bp CAGCTGCAAATGCCTGTTAAGCCTGAACGTGGGCTGGGTCCTTCAGATGGGTGGCCATTGCCATCTACCTaGTCAACCCTGACGGCCTCT +
Preference number: 4 (lower is better)
Translates to: QLQMPVKPERGLGPSDGWPLPST*STLTAS
Trigger: AGAGGCCGTCAGGGTTGAGCAGGTAGATGGCAATGG...CCACCCATCTGAAGGACCCAGCCCACGTTCAGGCTTAACAGGCATTTGCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CCA 90 bp CTCCTGACGCCTGTGCTTGTTTCCAGGAGCATCAGATCCATGCTGCTGCTGACTCCGAAGAGAGCTGCTTaGCCCGCCTCTTTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: LLTPVLVSRSIRSMLLLTPKRAA*PASFQR
Trigger: TCTCTGGAAAGAGGCGGGCCAAGCAGCTCTCTTCGG...AGTCAGCAGCAGCATGGATCTGATGCTCCTGGAAACAAGCACAGGCGTCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CCA 90 bp TTAGTCCGGGAGTCAGGGAAGTCATCCAGCGACAGGAACTCATTCTCTGCCTCCCCGAAGAGAGCTGCTTaGCCCGCCTCTTTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: LVRESGKSSSDRNSFSASPKRAA*PASFQR
Trigger: TCTCTGGAAAGAGGCGGGCCAAGCAGCTCTCTTCGG...GGAGGCAGAGAATGAGTTCCTGTCGCTGGATGACTTCCCTGACTCCCGGACTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
CDS-3UTR CCA 90 bp TCTTCACGGATTACTACGGCCGGAGCAGATCGGCTGAGCAGATCTCAGACAGTGGACTTCCGGGGCCAGTaGGTGCTGATGTACTTTGGC +
Preference number: 4 (lower is better)
Translates to: SSRITTAGADRLSRSQTVDFRGQ*VLMYFG
Trigger: GCCAAAGTACATCAGCACCCACTGGCCCCGGAAGTC...CACTGTCTGAGATCTGCTCAGCCGATCTGCTCCGGCCGTAGTAATCCGTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR TCA 90 bp CCAGTGCAGCCTGTCTTCATCACTGTGGACCCCGAGCGGGACGACGTTGAAGCCAAAGAAATGCAGATCTaGTCCAGCTCCTCCAGATAC +
Preference number: 4 (lower is better)
Translates to: PVQPVFITVDPERDDVEAKEMQI*SSSSRY
Trigger: GTATCTGGAGGAGCTGGATCAGATCTGCATTTCTTT...GGCTTCAACGTCGTCCCGCTCGGGGTCCACAGTGATGAAGACAGGCTGCACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR TCA 90 bp GGCAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAACAACGCTGCCTCAATaGAGTTCATTGTGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: GNTALLGRASQEQTHGSSTTLPQ*SSLWSC
Trigger: GCAAGACCACAATGAACTTCATTGAGGCAGCGTTGT...TGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR TCA 90 bp GCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTACCTCACTGGGCGTCTaGTCATTCTTGAGATCCACG +
Preference number: 4 (lower is better)
Translates to: ALLGRASQEQTHGSSVHITSLGV*SFLRST
Trigger: CGTGGATCTCAAGAATGATCAGACGCCCAGTGAGGT...AATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR TCA 90 bp CAAATGCCTGTTAAGCCTGAACGTGGGCTGGGTCCTTCAGATGGGTGGCTGGTCACCTCACTGGGCGTCTaGTCATTCTTGAGATCCACG +
Preference number: 4 (lower is better)
Translates to: QMPVKPERGLGPSDGWLVTSLGV*SFLRST
Trigger: CGTGGATCTCAAGAATGATCAGACGCCCAGTGAGGT...GACCAGCCACCCATCTGAAGGACCCAGCCCACGTTCAGGCTTAACAGGCATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR TCA 90 bp TGCACTTGGAATGCTTTCCGTCAGCAAGAGGTTCACCTTGCTGAGGTGCAGGTGAGGGACACCACTCATTaGGCTGGGGGAACCGTGAGA +
Preference number: 4 (lower is better)
Translates to: CTWNAFRQQEVHLAEVQVRDTTH*AGGTVR
Trigger: TCTCACGGTTCCCCCAGCTCAATGAGTGGTGTCCCT...CACCTGCACCTCAGCAAGGTGAACCTCTTGCTGACGGAAAGCATTCCAAGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR GCA 90 bp GCATGCACTTGGAATGCTTTCCGTCAGCAAGAGGTTCACCTTGCTGAGGTGCAGTTGGCCCTGTCCTCCTaGACCGAAGAGAGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: ACTWNAFRQQEVHLAEVQLALSS*TEESCL
Trigger: CAAGCAGCTCTCTTCGGTGCAGGAGGACAGGGCCAA...CTGCACCTCAGCAAGGTGAACCTCTTGCTGACGGAAAGCATTCCAAGTGCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR GCA 90 bp CAGCTGCAAATGCCTGTTAAGCCTGAACGTGGGCTGGGTCCTTCAGATGGGTGGGCTCAGGTGAGCAGCTaGAAATGCCTGTTAAGCCTG +
Preference number: 4 (lower is better)
Translates to: QLQMPVKPERGLGPSDGWAQVSS*KCLLSL
Trigger: CAGGCTTAACAGGCATTTGCAGCTGCTCACCTGAGC...CCACCCATCTGAAGGACCCAGCCCACGTTCAGGCTTAACAGGCATTTGCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CCA 90 bp AAGGATGAGGACCAGGACTACATCGTGGACCACTCCATTGCCATCTACCTGCTCACGCAGGCAGAGCCCTaGATCAACAACGCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: KDEDQDYIVDHSIAIYLLTQAEP*INNAAS
Trigger: TGAGGCAGCGTTGTTGATCCAGGGCTCTGCCTGCGT...GAGCAGGTAGATGGCAATGGAGTGGTCCACGATGTAGTCCTGGTCCTCATCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CCA 90 bp CCAGTGCAGCCTGTCTTCATCACTGTGGACCCCGAGCGGGACGACGTTGAAGCCAGGGGGAAGATGAGATaGCAACACTGCTTTATTAGG +
Preference number: 4 (lower is better)
Translates to: PVQPVFITVDPERDDVEARGKMR*QHCFIR
Trigger: CCTAATAAAGCAGTGTTGCCATCTCATCTTCCCCCT...GGCTTCAACGTCGTCCCGCTCGGGGTCCACAGTGATGAAGACAGGCTGCACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420993.7
3UTR CAA 72 bp AGGATGAGGACCAGGACTACATCGTGGACCACTCCATaGCCATCTACCTGCTCAACCCTGACGGCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: RMRTRTTSWTTP*PSTCSTLTASS
Trigger: TGAAGAGGCCGTCAGGGTTGAGCAGGTAGATGGCAATGGAGTGGTCCACGATGTAGTCCTGGTCCTCATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR TCA 90 bp CACGTTAGTCCGGGAGTCAGGGAAGTCATCCAGCGACAGGAACTCATTCTCTGCACCTCACTGGGCGTCTaGTCATTCTTGAGATCCACG +
Preference number: 4 (lower is better)
Translates to: HVSPGVREVIQRQELILCTSLGV*SFLRST
Trigger: CGTGGATCTCAAGAATGATCAGACGCCCAGTGAGGT...GCAGAGAATGAGTTCCTGTCGCTGGATGACTTCCCTGACTCCCGGACTAACGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
CDS-3UTR GCA 90 bp CCATCCCAGGTTGCCGTGAGCTCGACAGGGCTCAAATCCTTGGACGCCAGCCCACTTCGTCAAAAGAAATaGAGATCTGATCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PSQVAVSSTGLKSLDASPLRQKK*RSDPAP
Trigger: AGGAGCTGGATCAGATCTGCATTTCTTTTGACGAAG...TGGGCTGGCGTCCAAGGATTTGAGCCCTGTCGAGCTCACGGCAACCTGGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR GCA 90 bp GCGGCCATCCCAGGTTGCCGTGAGCTCGACAGGGCTCAAATCCTTGGACGCCAGAGTTCATTGTGGTCTTaGCTTCGTCAAAAGAAATGC +
Preference number: 4 (lower is better)
Translates to: AAIPGCRELDRAQILGRQSSLWS*LRQKKC
Trigger: GCATTTCTTTTGACGAAGGCAAGACCACAATGAACT...CTGGCGTCCAAGGATTTGAGCCCTGTCGAGCTCACGGCAACCTGGGATGGCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR GCA 90 bp CAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTCGAGTTCATTGTGGTCTTaGCTTCGTCAAAAGAAATGC +
Preference number: 4 (lower is better)
Translates to: QPGADTRLLSTHSPTPASSSLWS*LRQKKC
Trigger: GCATTTCTTTTGACGAAGGCAAGACCACAATGAACT...CGAGGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp AGCTGGCAACCCCATTGGCCCTGTCCTCCTGCACCGAAGAGAGCTGCTTGGCCCAGTTCATTGTGGTCTTaGCTTCGTCAAAAGAAATGC +
Preference number: 4 (lower is better)
Translates to: SWQPHWPCPPAPKRAAWPSSLWS*LRQKKC
Trigger: GCATTTCTTTTGACGAAGGCAAGACCACAATGAACT...GGGCCAAGCAGCTCTCTTCGGTGCAGGAGGACAGGGCCAATGGGGTTGCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
CDS-3UTR GCA 90 bp CCATCCCAGGTTGCCGTGAGCTCGACAGGGCTCAAATCCTTGGACGCCAGCCCACTGGATCAACAACGCTaGCTCAATGAAGTTCATTGT +
Preference number: 4 (lower is better)
Translates to: PSQVAVSSTGLKSLDASPLDQQR*LNEVHC
Trigger: ACAATGAACTTCATTGAGGCAGCGTTGTTGATCCAG...TGGGCTGGCGTCCAAGGATTTGAGCCCTGTCGAGCTCACGGCAACCTGGGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR GCA 90 bp ATTCTTGAGATCCACGTTAGTCCGGGAGTCAGGGAAGTCATCCAGCGACAGGAATGCACCGAAGAGAGCTaGTTGGCCCGCCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: ILEIHVSPGVREVIQRQECTEES*LARLFP
Trigger: TGGAAAGAGGCGGGCCAAGCAGCTCTCTTCGGTGCA...TTCCTGTCGCTGGATGACTTCCCTGACTCCCGGACTAACGTGGATCTCAAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
CDS-3UTR GCA 90 bp ATCATTAAACGGGCTGCGTTTAATCTGTGTGTGTGTGTGATCTGTACCAGCGGCAGGGCGACTTCCACCTaGTGGATCACAGAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: IIKRAAFNLCVCVICTSGRATST*WITEAG
Trigger: CCCGGCCTCTGTGATCCAGCAGGTGGAAGTCGCCCT...GCCGCTGGTACAGATCACACACACACACAGATTAAACGCAGCCCGTTTAATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CCA 90 bp ATTCTTGAGATCCACGTTAGTCCGGGAGTCAGGGAAGTCATCCAGCGACAGGAACCGAAGAGAGCTGCTTaGCCCGCCTCTTTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: ILEIHVSPGVREVIQRQEPKRAA*PASFQR
Trigger: TCTCTGGAAAGAGGCGGGCCAAGCAGCTCTCTTCGG...TTCCTGTCGCTGGATGACTTCCCTGACTCCCGGACTAACGTGGATCTCAAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
CDS-3UTR CCA 90 bp ACTACTCTGAGGAGCATCAGTTCTGCTCAGAGAGGGGAGGAACACAGAAGCTGCGCTCTTCAAAAGGGCTaGTTGCAGGACGGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: TTLRSISSAQRGEEHRSCALQKG*LQDGLQ
Trigger: TTGCAGCCCGTCCTGCAACCAGCCCTTTTGAAGAGC...GCAGCTTCTGTGTTCCTCCCCTCTCTGAGCAGAACTGATGCTCCTCAGAGTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR TCA 90 bp TGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATACAACGCTGCCTCAATaGAGTTCATTGTGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: CFIRPGQPGADTRLLSTHTTLPQ*SSLWSC
Trigger: GCAAGACCACAATGAACTTCATTGAGGCAGCGTTGT...ATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR TCA 90 bp TTCTTGAGATCCACGTTAGTCCGGGAGTCAGGGAAGTCATCCAGCGACAGGAACACCTCACTGGGCGTCTaGTCATTCTTGAGATCCACG +
Preference number: 4 (lower is better)
Translates to: FLRSTLVRESGKSSSDRNTSLGV*SFLRST
Trigger: CGTGGATCTCAAGAATGATCAGACGCCCAGTGAGGT...GTTCCTGTCGCTGGATGACTTCCCTGACTCCCGGACTAACGTGGATCTCAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
CDS-3UTR GCA 90 bp GGCAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCACTGGATCAACAACGCTaGCTCAATGAAGTTCATTGT +
Preference number: 4 (lower is better)
Translates to: GNTALLGRASQEQTHGSSLDQQR*LNEVHC
Trigger: ACAATGAACTTCATTGAGGCAGCGTTGTTGATCCAG...TGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp GAGGACCAGGACTACATCGTGGACCACTCCATTGCCATCTACCTGCTCAACCCTGTGAGCAGCTGCAAATaGCTGTTAAGCCTGAACGTG +
Preference number: 4 (lower is better)
Translates to: EDQDYIVDHSIAIYLLNPVSSCK*LLSLNV
Trigger: CACGTTCAGGCTTAACAGGCATTTGCAGCTGCTCAC...AGGGTTGAGCAGGTAGATGGCAATGGAGTGGTCCACGATGTAGTCCTGGTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CCA 90 bp GAGGACCTCACTGGGCGTCTGATCATTCTTGAGATCCACGTTAGTCCGGGAGTCCATCTTCCCCAACGCTaGCTCATCTCCTGTATTCCT +
Preference number: 4 (lower is better)
Translates to: EDLTGRLIILEIHVSPGVHLPQR*LISCIP
Trigger: AGGAATACAGGAGATGAGCCAGCGTTGGGGAAGATG...GACTCCCGGACTAACGTGGATCTCAAGAATGATCAGACGCCCAGTGAGGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418794.1
CDS-3UTR TCA 90 bp ACTACTCTGAGGAGCATCAGTTCTGCTCAGAGAGGGGAGGAACACAGAAGCTGCGCCTCTTTCCAGAGATaGAATCAAGGGCCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: TTLRSISSAQRGEEHRSCASFQR*NQGPGR
Trigger: TCTACCAGGCCCTTGATTTCATCTCTGGAAAGAGGC...GCAGCTTCTGTGTTCCTCCCCTCTCTGAGCAGAACTGATGCTCCTCAGAGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR TCA 90 bp ACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACTTTTTAGGGGGAAGATaGGATGGCAACACTGCTTTA +
Preference number: 4 (lower is better)
Translates to: TALLGRASQEQTHGSSVHFLGGR*DGNTAL
Trigger: TAAAGCAGTGTTGCCATCTCATCTTCCCCCTAAAAA...GTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR GCA 90 bp CACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACTTCGTCAAAAGAAATaGAGATCTGATCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: HCFIRPGQPGADTRLLSTLRQKK*RSDPAP
Trigger: AGGAGCTGGATCAGATCTGCATTTCTTTTGACGAAG...TGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp TTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCTTCGTCAAAAGAAATaGAGATCTGATCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LLGRASQEQTHGSSVHIPLRQKK*RSDPAP
Trigger: AGGAGCTGGATCAGATCTGCATTTCTTTTGACGAAG...GGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp GGCAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAAGTTCATTGTGGTCTTaGCTTCGTCAAAAGAAATGC +
Preference number: 4 (lower is better)
Translates to: GNTALLGRASQEQTHGSSSSLWS*LRQKKC
Trigger: GCATTTCTTTTGACGAAGGCAAGACCACAATGAACT...TGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR TCA 90 bp CTCACTGGGCGTCTGATCATTCTTGAGATCCACGTTAGTCCGGGAGTCAGGGAAACAACGCTGCCTCAATaGAGTTCATTGTGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: LTGRLIILEIHVSPGVRETTLPQ*SSLWSC
Trigger: GCAAGACCACAATGAACTTCATTGAGGCAGCGTTGT...TTCCCTGACTCCCGGACTAACGTGGATCTCAAGAATGATCAGACGCCCAGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
CDS-3UTR TCA 90 bp ATTCTTGAGATCCACGTTAGTCCGGGAGTCAGGGAAGTCATCCAGCGACAGGAAGCCTCTTTCCAGAGATaGAATCAAGGGCCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: ILEIHVSPGVREVIQRQEASFQR*NQGPGR
Trigger: TCTACCAGGCCCTTGATTTCATCTCTGGAAAGAGGC...TTCCTGTCGCTGGATGACTTCCCTGACTCCCGGACTAACGTGGATCTCAAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
CDS-3UTR TCA 90 bp CTCACTGGGCGTCTGATCATTCTTGAGATCCACGTTAGTCCGGGAGTCAGGGAATTCCTTCTCAGCAAATaGCACTCCTCCAGATACTCG +
Preference number: 4 (lower is better)
Translates to: LTGRLIILEIHVSPGVREFLLSK*HSSRYS
Trigger: CGAGTATCTGGAGGAGTGTCATTTGCTGAGAAGGAA...TTCCCTGACTCCCGGACTAACGTGGATCTCAAGAATGATCAGACGCCCAGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418794.1
CDS-3UTR GCA 90 bp TTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCTGGATCAACAACGCTaGCTCAATGAAGTTCATTGT +
Preference number: 4 (lower is better)
Translates to: FIRPGQPGADTRLLSTHSLDQQR*LNEVHC
Trigger: ACAATGAACTTCATTGAGGCAGCGTTGTTGATCCAG...GGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp CACGTTAGTCCGGGAGTCAGGGAAGTCATCCAGCGACAGGAACTCATTCTCTGCCTTCGTCAAAAGAAATaGAGATCTGATCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: HVSPGVREVIQRQELILCLRQKK*RSDPAS
Trigger: GCTGGCTGGATCAGATCTGCATTTCTTTTGACGAAG...GCAGAGAATGAGTTCCTGTCGCTGGATGACTTCCCTGACTCCCGGACTAACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518394.5
CDS-3UTR TCA 90 bp ACTACTCTGAGGAGCATCAGTTCTGCTCAGAGAGGGGAGGAACACAGAAGCTGCAAAGAAATGCAGATCTaGTCCAGCTCCTCCAGATAC +
Preference number: 4 (lower is better)
Translates to: TTLRSISSAQRGEEHRSCKEMQI*SSSSRY
Trigger: GTATCTGGAGGAGCTGGATCAGATCTGCATTTCTTT...GCAGCTTCTGTGTTCCTCCCCTCTCTGAGCAGAACTGATGCTCCTCAGAGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR TCA 90 bp TTCTTGAGATCCACGTTAGTCCGGGAGTCAGGGAAGTCATCCAGCGACAGGAACAAAGAAATGCAGATCTaGTCCAGCCAACATCTTCCC +
Preference number: 4 (lower is better)
Translates to: FLRSTLVRESGKSSSDRNKEMQI*SSQHLP
Trigger: GGGAAGATGTTGGCTGGATCAGATCTGCATTTCTTT...GTTCCTGTCGCTGGATGACTTCCCTGACTCCCGGACTAACGTGGATCTCAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418794.1
CDS-3UTR GCA 90 bp GCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTAGTTCATTGTGGTCTTaGCTTCGTCAAAAGAAATGC +
Preference number: 4 (lower is better)
Translates to: ALLGRASQEQTHGSSVHISSLWS*LRQKKC
Trigger: GCATTTCTTTTGACGAAGGCAAGACCACAATGAACT...AATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR GCA 90 bp TTAGTCCGGGAGTCAGGGAAGTCATCCAGCGACAGGAACTCATTCTCTGCCTCCCTGGATCAACAACGCTaGCTCAATGAAGTTCATTGT +
Preference number: 4 (lower is better)
Translates to: LVRESGKSSSDRNSFSASLDQQR*LNEVHC
Trigger: ACAATGAACTTCATTGAGGCAGCGTTGTTGATCCAG...GGAGGCAGAGAATGAGTTCCTGTCGCTGGATGACTTCCCTGACTCCCGGACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
CDS-3UTR GCA 90 bp AGTCACAGTTACCGCGTGTACTACAATGCAGGCCCCAAGGATGAGGACCAGGACCTGGATCAACAACGCTaGCTCAATGAAGTTCATTGT +
Preference number: 4 (lower is better)
Translates to: SHSYRVYYNAGPKDEDQDLDQQR*LNEVHC
Trigger: ACAATGAACTTCATTGAGGCAGCGTTGTTGATCCAG...GTCCTGGTCCTCATCCTTGGGGCCTGCATTGTAGTACACGCGGTAACTGTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR GCA 90 bp GAGGACCTCACTGGGCGTCTGATCATTCTTGAGATCCACGTTAGTCCGGGAGTCCTTCGTCAAAAGAAATaGAGATCTGATCCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: EDLTGRLIILEIHVSPGVLRQKK*RSDPAN
Trigger: GTTGGCTGGATCAGATCTGCATTTCTTTTGACGAAG...GACTCCCGGACTAACGTGGATCTCAAGAATGATCAGACGCCCAGTGAGGTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418794.1
CDS-3UTR GCA 90 bp TCCACGTTAGTCCGGGAGTCAGGGAAGTCATCCAGCGACAGGAACTCATTCTCTCTGGATCAACAACGCTaGCTCAATGAAGTTCATTGT +
Preference number: 4 (lower is better)
Translates to: STLVRESGKSSSDRNSFSLDQQR*LNEVHC
Trigger: ACAATGAACTTCATTGAGGCAGCGTTGTTGATCCAG...AGAGAATGAGTTCCTGTCGCTGGATGACTTCCCTGACTCCCGGACTAACGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
CDS-3UTR CAA 90 bp GGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCGGCTCCAGAGCGGCCTaGGGGGCCGAGGCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: GRASQEQTHGSSVHIPPPGSRAA*GAEASG
Trigger: TCCTGAGGCCTCGGCCCCCAAGGCCGCTCTGGAGCC...GGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS CCA 90 bp CAGGTTCTGCAGGCCTCCATGTGGGTCCCACCTGCTGCGGGCTCCTaGACTCCTTGGGCTCCAGAGCGGCCTTGGGGGCCGAGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: QVLQASMWVPPAAGS*TPWAPERPWGPRPQ
Trigger: CTGAGGCCTCGGCCCCCAAGGCCGCTCTGGAGCCCAAGGAGTCCAGGAGCCCGCAGCAGGTGGGACCCACATGGAGGCCTGCAGAACCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS CCA 90 bp CCTCCTGGGCAGGGCAGCACTCAGCCCGACTGCAGAGAGGCGCCTTaGCAACCGGCGGCCATCCCAGGTTGCCGTGAGCTCGACAGGGCT +
Preference number: 5 (lower is better)
Translates to: PPGQGSTQPDCREAP*QPAAIPGCRELDRA
Trigger: AGCCCTGTCGAGCTCACGGCAACCTGGGATGGCCGCCGGTTGCCAAGGCGCCTCTCTGCAGTCGGGCTGAGTGCTGCCCTGCCCAGGAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520297.5
CDS-3UTR CAA 90 bp GGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCGGCTCCAGAGCGGCCTaGGGGGCCGAGGCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: GQPGADTRLLSTHSPTPAGSRAA*GAEASG
Trigger: TCCTGAGGCCTCGGCCCCCAAGGCCGCTCTGGAGCC...GGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CAA 90 bp CAGACACTCCCTCCTACCAGCCCGACTGCAGAGAGGCGCCTTGGCAACCGGCGGCTGCAGAGAGGCGCCTaGGCAACCGGCGGCCATCCC +
Preference number: 5 (lower is better)
Translates to: QTLPPTSPTAERRLGNRRLQRGA*ATGGHP
Trigger: GGGATGGCCGCCGGTTGCCAAGGCGCCTCTCTGCAG...CCGCCGGTTGCCAAGGCGCCTCTCTGCAGTCGGGCTGGTAGGAGGGAGTGTCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS GCA 90 bp GCCGCCACGTCCACCTCCCAGTTCTTGGTGAGGTCGCGGATGGGCTaGAAGAGGTGGGCGAAGCGCGCCTCCACGTCCTCCATGTCCGGG +
Preference number: 5 (lower is better)
Translates to: AATSTSQFLVRSRMG*KRWAKRASTSSMSG
Trigger: CCCGGACATGGAGGACGTGGAGGCGCGCTTCGCCCACCTCTTGCAGCCCATCCGCGACCTCACCAAGAACTGGGAGGTGGACGTGGCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299821.15
ENST00000395698.7
ENST00000395701.7
ENST00000418794.1
ENST00000420993.7
ENST00000518394.5
ENST00000523045.5
CDS-3UTR CAA 90 bp GCGGCCATCCCAGGTTGCCGTGAGCTCGACAGGGCTCAAATCCTTGGACGCCAGGGCTCCAGAGCGGCCTaGGGGGCCGAGGCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: AAIPGCRELDRAQILGRQGSRAA*GAEASG
Trigger: TCCTGAGGCCTCGGCCCCCAAGGCCGCTCTGGAGCC...CTGGCGTCCAAGGATTTGAGCCCTGTCGAGCTCACGGCAACCTGGGATGGCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CAA 90 bp AGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTCGGGGCTCCAGAGCGGCCTaGGGGGCCGAGGCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: SQEQTHGSSVHIPPPLPRGSRAA*GAEASG
Trigger: TCCTGAGGCCTCGGCCCCCAAGGCCGCTCTGGAGCC...CCGAGGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CAA 90 bp GGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCGGGCTCCTGGACTCCTaGGGCTCCAGAGCGGCCTTG +
Preference number: 5 (lower is better)
Translates to: GRASQEQTHGSSVHIPPPGLLDS*GSRAAL
Trigger: CAAGGCCGCTCTGGAGCCCAAGGAGTCCAGGAGCCC...GGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CAA 90 bp GCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCGGGCTCCTGGACTCCTaGGGCTCCAGAGCGGCCTTG +
Preference number: 5 (lower is better)
Translates to: AGPARSRHTAPQYTFPHPGLLDS*GSRAAL
Trigger: CAAGGCCGCTCTGGAGCCCAAGGAGTCCAGGAGCCC...GGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS TCA 90 bp CTGATCCAGCCAGCTGGGCCGCCACGTCCACCTCCCAGTTCTTGGTaGGGTCGCGGATGGGCTGCAAGAGGTGGGCGAAGCGCGCCTCCA +
Preference number: 5 (lower is better)
Translates to: LIQPAGPPRPPPSSW*GRGWAARGGRSAPP
Trigger: TGGAGGCGCGCTTCGCCCACCTCTTGCAGCCCATCCGCGACCTCACCAAGAACTGGGAGGTGGACGTGGCGGCCCAGCTGGCTGGATCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518394.5
CDS GCA 90 bp GTTCACAGCTCAGGTTCTGCAGGCCTCCATGTGGGTCCCACCTGCTaGGGGCTCCTGGACTCCTTGGGCTCCAGAGCGGCCTTGGGGGCC +
Preference number: 5 (lower is better)
Translates to: VHSSGSAGLHVGPTC*GLLDSLGSRAALGA
Trigger: GGCCCCCAAGGCCGCTCTGGAGCCCAAGGAGTCCAGGAGCCCGCAGCAGGTGGGACCCACATGGAGGCCTGCAGAACCTGAGCTGTGAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS CCA 90 bp CCACCTGCTGCGGGCTCCTGGACTCCTTGGGCTCCAGAGCGGCCTTaGGGGCCGAGGCCTCAGGAAGCTCTACTGCCTCCTCTGCATCCT +
Preference number: 5 (lower is better)
Translates to: PPAAGSWTPWAPERP*GPRPQEALLPPLHP
Trigger: AGGATGCAGAGGAGGCAGTAGAGCTTCCTGAGGCCTCGGCCCCCAAGGCCGCTCTGGAGCCCAAGGAGTCCAGGAGCCCGCAGCAGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CAA 90 bp GGCCATGGAGGGGGCAGCGTAGGTCTGGAAGCGCTTGTGCGCTCGCTGGTGCGTGAGCTGGCAACCCCATaGGCCCTGTCCTCCTGCACC +
Preference number: 5 (lower is better)
Translates to: GHGGGSVGLEALVRSLVRELATP*ALSSCT
Trigger: GGTGCAGGAGGACAGGGCCAATGGGGTTGCCAGCTC...ACGCACCAGCGAGCGCACAAGCGCTTCCAGACCTACGCTGCCCCCTCCATGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395701.7
CDS-3UTR CAA 90 bp TGCGCCAGGCAGCTGTGGGCCAGGGCGACTTCCACCTGCTGGATCACAGAGGCCGAGCTGGCAACCCCATaGGCCCTGTCCTCCTGCACC +
Preference number: 5 (lower is better)
Translates to: CARQLWARATSTCWITEAELATP*ALSSCT
Trigger: GGTGCAGGAGGACAGGGCCAATGGGGTTGCCAGCTC...GGCCTCTGTGATCCAGCAGGTGGAAGTCGCCCTGGCCCACAGCTGCCTGGCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CAA 90 bp CTGGGTCCCTGGCATGGGGGAAACGCCCGCTGGTTCCATGGGGGACATGCCCTCGAGCTGGCAACCCCATaGGCCCTGTCCTCCTGCACC +
Preference number: 5 (lower is better)
Translates to: LGPWHGGNARWFHGGHALELATP*ALSSCT
Trigger: GGTGCAGGAGGACAGGGCCAATGGGGTTGCCAGCTC...GAGGGCATGTCCCCCATGGAACCAGCGGGCGTTTCCCCCATGCCAGGGACCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000518394.5
CDS GCA 90 bp CCAGTTCACAGCTCAGGTTCTGCAGGCCTCCATGTGGGTCCCACCTaGTGCGGGCTCCTGGACTCCTTGGGCTCCAGAGCGGCCTTGGGG +
Preference number: 5 (lower is better)
Translates to: PVHSSGSAGLHVGPT*CGLLDSLGSRAALG
Trigger: CCCCAAGGCCGCTCTGGAGCCCAAGGAGTCCAGGAGCCCGCAGCAGGTGGGACCCACATGGAGGCCTGCAGAACCTGAGCTGTGAACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS GCA 90 bp TGGGGACCGTCTCCCCCTCCCACGTATCCCAGGCTACTCACCAGCTaGAGGGAGGCCAGCATGGAACGACACACCTCGAAGGCCGGCTGG +
Preference number: 5 (lower is better)
Translates to: WGPSPPPTYPRLLTS*REASMERHTSKAGW
Trigger: CCAGCCGGCCTTCGAGGTGTGTCGTTCCATGCTGGCCTCCCTGCAGCTGGTGAGTAGCCTGGGATACGTGGGAGGGGGAGACGGTCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395701.7
CDS CCA 90 bp TCCACCTCCCAGTTCTTGGTGAGGTCGCGGATGGGCTGCAAGAGGTaGGCGAAGCGCGCCTCCACGTCCTCCATGTCCGGGAGGGAACGG +
Preference number: 5 (lower is better)
Translates to: STSQFLVRSRMGCKR*AKRASTSSMSGRER
Trigger: CCGTTCCCTCCCGGACATGGAGGACGTGGAGGCGCGCTTCGCCCACCTCTTGCAGCCCATCCGCGACCTCACCAAGAACTGGGAGGTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299821.15
ENST00000395698.7
ENST00000395701.7
ENST00000418794.1
ENST00000420993.7
ENST00000518394.5
ENST00000523045.5
CDS CCA 90 bp CCTCCCGGTGTCCTTCTGGGTCCCTGGCATGGGGGAAACGCCCGCTaGTTCCATGGGGGACATGCCCTCTGGCTCCAACATGAAGGCCCC +
Preference number: 5 (lower is better)
Translates to: PPGVLLGPWHGGNAR*FHGGHALWLQHEGP
Trigger: GGGGCCTTCATGTTGGAGCCAGAGGGCATGTCCCCCATGGAACCAGCGGGCGTTTCCCCCATGCCAGGGACCCAGAAGGACACCGGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000299821.15
ENST00000395698.7
ENST00000395701.7
ENST00000420993.7
ENST00000523045.5
CDS CCA 90 bp CACTCTGCTGCGGGCTCCTGGACTCCTTGGGCTCCAGAGCGGCCTTaGGGGCCGAGGCCTCAGGAAGCTCTACTGCCTCCTCTGCATCCT +
Preference number: 5 (lower is better)
Translates to: HSAAGSWTPWAPERP*GPRPQEALLPPLHP
Trigger: AGGATGCAGAGGAGGCAGTAGAGCTTCCTGAGGCCTCGGCCCCCAAGGCCGCTCTGGAGCCCAAGGAGTCCAGGAGCCCGCAGCAGAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000523045.5
CDS CCA 90 bp CTCCCACGTATCCCAGGCTACTCACCAGCTGCAGGGAGGCCAGCATaGAACGACACACCTCGAAGGCCGGCTGGCCAGCCACCAGCTCCG +
Preference number: 5 (lower is better)
Translates to: LPRIPGYSPAAGRPA*NDTPRRPAGQPPAP
Trigger: CGGAGCTGGTGGCTGGCCAGCCGGCCTTCGAGGTGTGTCGTTCCATGCTGGCCTCCCTGCAGCTGGTGAGTAGCCTGGGATACGTGGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395701.7
CDS-3UTR CAA 90 bp AGAGAGGCGCCTTGGCAACCGGCGGCCATCCCAGGTTGCCGTGAGCTCGACAGGCTAGGCTGGGTACAGTaGACCCCGGGGGTTGAGGGA +
Preference number: 5 (lower is better)
Translates to: REAPWQPAAIPGCRELDRLGWVQ*TPGVEG
Trigger: TCCCTCAACCCCCGGGGTCAACTGTACCCAGCCTAG...CCTGTCGAGCTCACGGCAACCTGGGATGGCCGCCGGTTGCCAAGGCGCCTCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CAA 90 bp CCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTCCCGAGCGGGACGACGTaGAAGCCATGGCCCGCTACG +
Preference number: 5 (lower is better)
Translates to: PARSRHTAPQYTFPHPCLPSGTT*KPWPAT
Trigger: CGTAGCGGGCCATGGCTTCAACGTCGTCCCGCTCGG...GAGGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CAA 90 bp GGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTCCACCTCCCAGTTCTaGGTGAGGTCGCGGATGGGC +
Preference number: 5 (lower is better)
Translates to: GQPGADTRLLSTHSPTPASTSQF*VRSRMG
Trigger: GCCCATCCGCGACCTCACCAAGAACTGGGAGGTGGA...GGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CAA 90 bp CCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTTCCACCTCCCAGTTCTaGGTGAGGTCGCGGATGGGC +
Preference number: 5 (lower is better)
Translates to: PGQPGADTRLLSTHSPTPSTSQF*VRSRMG
Trigger: GCCCATCCGCGACCTCACCAAGAACTGGGAGGTGGA...AGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CAA 90 bp CCATCCCAGGTTGCCGTGAGCTCGACAGGGCTCAAATCCTTGGACGCCAGCCCAGGGCTCCTGGACTCCTaGGGCTCCAGAGCGGCCTTG +
Preference number: 5 (lower is better)
Translates to: PSQVAVSSTGLKSLDASPGLLDS*GSRAAL
Trigger: CAAGGCCGCTCTGGAGCCCAAGGAGTCCAGGAGCCC...TGGGCTGGCGTCCAAGGATTTGAGCCCTGTCGAGCTCACGGCAACCTGGGATGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CAA 90 bp CTCCCTCCTACCAGCCCGACTGCAGAGAGGCGCCTTGGCAACCGGCGGCCATCCCTTCAAAAGGGCTGGTaGCAGGACGGGCTGCAAGAC +
Preference number: 5 (lower is better)
Translates to: LPPTSPTAERRLGNRRPSLQKGW*QDGLQD
Trigger: GTCTTGCAGCCCGTCCTGCAACCAGCCCTTTTGAAG...GGATGGCCGCCGGTTGCCAAGGCGCCTCTCTGCAGTCGGGCTGGTAGGAGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS TCA 90 bp AGGCCGGCTGGCCAGCCACCAGCTCCGCAAAGGGACACCACTCATTaGGCTGGGGGAACCGTGAGACCAGCTGGTCCCCATAGGTGTGGA +
Preference number: 5 (lower is better)
Translates to: RPAGQPPAPQRDTTH*AGGTVRPAGPHRCG
Trigger: TCCACACCTATGGGGACCAGCTGGTCTCACGGTTCCCCCAGCTCAATGAGTGGTGTCCCTTTGCGGAGCTGGTGGCTGGCCAGCCGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS GCA 90 bp CCGAGTGCTGGGACAGGGCTCCTGCACACGGAAACTTCCATTGGCTaGTCCTCAGTCCTCCCGGTGTCCTTCTGGGTCCCTGGCATGGGG +
Preference number: 5 (lower is better)
Translates to: PSAGTGLLHTETSIG*SSVLPVSFWVPGMG
Trigger: CCCCATGCCAGGGACCCAGAAGGACACCGGGAGGACTGAGGAGCAGCCAATGGAAGTTTCCGTGTGCAGGAGCCCTGTCCCAGCACTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299821.15
ENST00000395698.7
ENST00000395701.7
ENST00000420993.7
ENST00000523045.5
CDS GCA 90 bp AGGGGCCTGGCTCCTGGGAGAAGCCGAGTGCTGGGACAGGGCTCCTaGACACGGAAACTTCCATTGGCTGCTCCTCAGTCCTCCCGGTGT +
Preference number: 5 (lower is better)
Translates to: RGLAPGRSRVLGQGS*TRKLPLAAPQSSRC
Trigger: ACACCGGGAGGACTGAGGAGCAGCCAATGGAAGTTTCCGTGTGCAGGAGCCCTGTCCCAGCACTCGGCTTCTCCCAGGAGCCAGGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299821.15
ENST00000395698.7
ENST00000395701.7
ENST00000420993.7
ENST00000523045.5
CDS CCA 90 bp AGCTGCAGGGAGGCCAGCATGGAACGACACACCTCGAAGGCCGGCTaGCCAGCCACCAGCTCCGCAAAGGGACACCACTCATTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: SCREASMERHTSKAG*PATSSAKGHHSLSW
Trigger: CCAGCTCAATGAGTGGTGTCCCTTTGCGGAGCTGGTGGCTGGCCAGCCGGCCTTCGAGGTGTGTCGTTCCATGCTGGCCTCCCTGCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS CCA 90 bp AGCTGCAGGGAGGCCAGCATGGAACGACACACCTCGAAGGCCGGCTaGCCAGCCACCAGCTCCGCAAAGGGACACCACTCATTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: SCREASMERHTSKAG*PATSSAKGHHSLSC
Trigger: GCAGCTCAATGAGTGGTGTCCCTTTGCGGAGCTGGTGGCTGGCCAGCCGGCCTTCGAGGTGTGTCGTTCCATGCTGGCCTCCCTGCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522304.1
CDS-3UTR CAA 90 bp AGCTGGCAACCCCATTGGCCCTGTCCTCCTGCACCGAAGAGAGCTGCTTGGCCCTCCACCTCCCAGTTCTaGGTGAGGTCGCGGATGGGC +
Preference number: 5 (lower is better)
Translates to: SWQPHWPCPPAPKRAAWPSTSQF*VRSRMG
Trigger: GCCCATCCGCGACCTCACCAAGAACTGGGAGGTGGA...GGGCCAAGCAGCTCTCTTCGGTGCAGGAGGACAGGGCCAATGGGGTTGCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
CDS-3UTR CAA 90 bp GGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCACCGAAGAGAGCTGCTaGGCCCGCCTCTTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: GQPGADTRLLSTHSPTPATEESC*ARLFPE
Trigger: CTCTGGAAAGAGGCGGGCCAAGCAGCTCTCTTCGGT...GGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CAA 90 bp GGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCAAGGGACACCACTCATaGAGCTGGGGGAACCGTGAG +
Preference number: 5 (lower is better)
Translates to: GRASQEQTHGSSVHIPPPKGHHS*SWGNRE
Trigger: CTCACGGTTCCCCCAGCTCAATGAGTGGTGTCCCTT...GGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CAA 90 bp ACTCCCTCCTACCAGCCCGACTGCAGAGAGGCGCCTTGGCAACCGGCGGCCATCATACCACTGTCCTCCTaGTGCAAGGTGACTCGGCCC +
Preference number: 5 (lower is better)
Translates to: TPSYQPDCREAPWQPAAIIPLSS*CKVTRP
Trigger: GGGCCGAGTCACCTTGCACAAGGAGGACAGTGGTAT...GATGGCCGCCGGTTGCCAAGGCGCCTCTCTGCAGTCGGGCTGGTAGGAGGGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CAA 90 bp AGAGAGGCGCCTTGGCAACCGGCGGCCATCCCAGGTTGCCGTGAGCTCGACAGGACAGGGCTCAAATCCTaGGACGCCAGCCCACTACTC +
Preference number: 5 (lower is better)
Translates to: REAPWQPAAIPGCRELDRTGLKS*DASPLL
Trigger: GAGTAGTGGGCTGGCGTCCAAGGATTTGAGCCCTGT...CCTGTCGAGCTCACGGCAACCTGGGATGGCCGCCGGTTGCCAAGGCGCCTCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS GCA 90 bp CCCTCCCGCTCCCGCAGCATGTACCTCCTGGGCAGGGCAGCACTCTaGAAAGACAGTCACAGGGTCCCCACTTCTCCTCTTTCTCCCCTC +
Preference number: 5 (lower is better)
Translates to: PSRSRSMYLLGRAAL*KDSHRVPTSPLSPL
Trigger: GAGGGGAGAAAGAGGAGAAGTGGGGACCCTGTGACTGTCTTTGCAGAGTGCTGCCCTGCCCAGGAGGTACATGCTGCGGGAGCGGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522048.1
CDS CCA 90 bp CACTGTGTAGTCATTGGCCTGCAGGGGTGGCACATCAGCAGGGTCTaGGGACCGTCTCCCCCTCCCACGTATCCCAGGCTACTCACCAGC +
Preference number: 5 (lower is better)
Translates to: HCVVIGLQGWHISRV*GPSPPPTYPRLLTS
Trigger: GCTGGTGAGTAGCCTGGGATACGTGGGAGGGGGAGACGGTCCCCAGACCCTGCTGATGTGCCACCCCTGCAGGCCAATGACTACACAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395701.7
CDS CCA 90 bp CCATCTCCAGCCCGGGCTGCTGGGTTATCTCCACTGTGTAGTCATTaGCCTGCAGGGGTGGCACATCAGCAGGGTCTGGGGACCGTCTCC +
Preference number: 5 (lower is better)
Translates to: PSPARAAGLSPLCSH*PAGVAHQQGLGTVS
Trigger: GGAGACGGTCCCCAGACCCTGCTGATGTGCCACCCCTGCAGGCCAATGACTACACAGTGGAGATAACCCAGCAGCCCGGGCTGGAGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395701.7
CDS-3UTR CAA 90 bp CCATCCCAGGTTGCCGTGAGCTCGACAGGGCTCAAATCCTTGGACGCCAGCCCATCCACCTCCCAGTTCTaGGTGAGGTCGCGGATGGGC +
Preference number: 5 (lower is better)
Translates to: PSQVAVSSTGLKSLDASPSTSQF*VRSRMG
Trigger: GCCCATCCGCGACCTCACCAAGAACTGGGAGGTGGA...TGGGCTGGCGTCCAAGGATTTGAGCCCTGTCGAGCTCACGGCAACCTGGGATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CAA 90 bp CTCAGGGCTGGGCCATGGAGGGGGCAGCGTAGGTCTGGAAGCGCTTGTGCGCTCACACGGAAACTTCCATaGGCTGCTCCTCAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: LRAGPWRGQRRSGSACALTRKLP*AAPQSS
Trigger: GGAGGACTGAGGAGCAGCCAATGGAAGTTTCCGTGT...GAGCGCACAAGCGCTTCCAGACCTACGCTGCCCCCTCCATGGCCCAGCCCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395701.7
CDS-3UTR CAA 90 bp CCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTAAGGGACACCACTCATaGAGCTGGGGGAACCGTGAG +
Preference number: 5 (lower is better)
Translates to: PGQPGADTRLLSTHSPTPKGHHS*SWGNRE
Trigger: CTCACGGTTCCCCCAGCTCAATGAGTGGTGTCCCTT...AGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CAA 90 bp GCTTCGAACCCGGCTGCTGATCACAGGCCTGTTCGGGGCTGGACTCGGTGGGGCAGTTCTGGCGCCATTTaGCTGTTCCCGCCCAGGAAA +
Preference number: 5 (lower is better)
Translates to: ASNPAADHRPVRGWTRWGSSGAI*LFPPRK
Trigger: TTTCCTGGGCGGGAACAGCAAAATGGCGCCAGAACT...GCCCCACCGAGTCCAGCCCCGAACAGGCCTGTGATCAGCAGCCGGGTTCGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CAA 90 bp TTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCGCAGTGTCCTGTCTaGAGCCACTGCAGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: LGRASQEQTHGSSVHIPPPQCPV*SHCSLG
Trigger: GCCCAGACTGCAGTGGCTCAAGACAGGACACTGCGG...TGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS GCA 90 bp CCACTGTCCTCCTTGTGCAAGGTGACTCGGCCCCAGAGCCAGGGTTaGCAGTTCACAGCTCAGGTTCTGCAGGCCTCCATGTGGGTCCCA +
Preference number: 5 (lower is better)
Translates to: PLSSLCKVTRPQSQG*QFTAQVLQASMWVP
Trigger: TGGGACCCACATGGAGGCCTGCAGAACCTGAGCTGTGAACTGGCAACCCTGGCTCTGGGGCCGAGTCACCTTGCACAAGGAGGACAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS GCA 90 bp CCAGACCAGTGGTCTGGGGCCAAGGCCATACCACTGTCCTCCTTGTaGAAGGTGACTCGGCCCCAGAGCCAGGGTTGCCAGTTCACAGCT +
Preference number: 5 (lower is better)
Translates to: PDQWSGAKAIPLSSL*KVTRPQSQGCQFTA
Trigger: AGCTGTGAACTGGCAACCCTGGCTCTGGGGCCGAGTCACCTTGCACAAGGAGGACAGTGGTATGGCCTTGGCCCCAGACCACTGGTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS CCA 90 bp GGTCTGCATAGGCAGCCAGGTACCACTGGTGGAAGTCCTGCAGCTTaGCAGCGCCCTTCCTCTTGCGCTTCTGTCCCAGAGCCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: GLHRQPGTTGGSPAA*QRPSSCASVPEPPP
Trigger: TGGAGGAGGCTCTGGGACAGAAGCGCAAGAGGAAGGGCGCTGCCAAGCTGCAGGACTTCCACCAGTGGTACCTGGCTGCCTATGCAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000520297.5
ENST00000522048.1
CDS-3UTR CAA 90 bp TCTGCCCCAGACCAGTGGTCTGGGGCCAAGGCCATACCACTGTCCTCCTTGTGCACCGAAGAGAGCTGCTaGGCCCGCCTCTTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: SAPDQWSGAKAIPLSSLCTEESC*ARLFPE
Trigger: CTCTGGAAAGAGGCGGGCCAAGCAGCTCTCTTCGGT...GCACAAGGAGGACAGTGGTATGGCCTTGGCCCCAGACCACTGGTCTGGGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CAA 90 bp GAAACGCCCGCTGGTTCCATGGGGGACATGCCCTCTGGCTCCAACATGAAGGCCACCGAAGAGAGCTGCTaGGCCCGCCTCTTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: ETPAGSMGDMPSGSNMKATEESC*ARLFPE
Trigger: CTCTGGAAAGAGGCGGGCCAAGCAGCTCTCTTCGGT...GGCCTTCATGTTGGAGCCAGAGGGCATGTCCCCCATGGAACCAGCGGGCGTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518394.5
CDS-3UTR CAA 90 bp AGATGGCAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCGAGCTGGCAACCCCATaGGCCCTGTCCTCCTGCACC +
Preference number: 5 (lower is better)
Translates to: RWQHCFIRPGQPGADTRLELATP*ALSSCT
Trigger: GGTGCAGGAGGACAGGGCCAATGGGGTTGCCAGCTC...GAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTGCCATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CAA 90 bp GGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCACACGGAAACTTCCATaGGCTGCTCCTCAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: GQPGADTRLLSTHSPTPATRKLP*AAPQSS
Trigger: GGAGGACTGAGGAGCAGCCAATGGAAGTTTCCGTGT...GGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CAA 90 bp TTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCGGGCTCCTGGACTCCTaGGGCTCCAGAGCGGCCTTG +
Preference number: 5 (lower is better)
Translates to: FIRPGQPGADTRLLSTHSGLLDS*GSRAAL
Trigger: CAAGGCCGCTCTGGAGCCCAAGGAGTCCAGGAGCCC...GGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CAA 90 bp GTCAGCAAGAGGTTCACCTTGCTGAGGTGCAGGTGCAGGGCAGGGTGCGGTGACTGGAAGTCCTGCAGCTaGGCAGCGCCCTTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: VSKRFTLLRCRCRAGCGDWKSCS*AAPFLL
Trigger: CAAGAGGAAGGGCGCTGCCAAGCTGCAGGACTTCCA...GTCACCGCACCCTGCCCTGCACCTGCACCTCAGCAAGGTGAACCTCTTGCTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CAA 90 bp CTGCAAATGCCTGTTAAGCCTGAACGTGGGCTGGGTCCTTCAGATGGGTGGCTGTCCACCTCCCAGTTCTaGGTGAGGTCGCGGATGGGC +
Preference number: 5 (lower is better)
Translates to: LQMPVKPERGLGPSDGWLSTSQF*VRSRMG
Trigger: GCCCATCCGCGACCTCACCAAGAACTGGGAGGTGGA...CAGCCACCCATCTGAAGGACCCAGCCCACGTTCAGGCTTAACAGGCATTTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CAA 90 bp CAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACCGAAGAGAGCTGCTaGGCCCGCCTCTTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: QHCFIRPGQPGADTRLLSTEESC*ARLFPE
Trigger: CTCTGGAAAGAGGCGGGCCAAGCAGCTCTCTTCGGT...ACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CAA 90 bp ACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACACCGAAGAGAGCTGCTaGGCCCGCCTCTTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: TALLGRASQEQTHGSSVHTEESC*ARLFPE
Trigger: CTCTGGAAAGAGGCGGGCCAAGCAGCTCTCTTCGGT...GTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CAA 90 bp CCATCCCAGGTTGCCGTGAGCTCGACAGGGCTCAAATCCTTGGACGCCAGCCCAACACGGAAACTTCCATaGGCTGCTCCTCAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: PSQVAVSSTGLKSLDASPTRKLP*AAPQSS
Trigger: GGAGGACTGAGGAGCAGCCAATGGAAGTTTCCGTGT...TGGGCTGGCGTCCAAGGATTTGAGCCCTGTCGAGCTCACGGCAACCTGGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CAA 90 bp ACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACTGGAAGTCCTGCAGCTaGGCAGCGCCCTTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: TALLGRASQEQTHGSSVHWKSCS*AAPFLL
Trigger: CAAGAGGAAGGGCGCTGCCAAGCTGCAGGACTTCCA...GTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CAA 90 bp CAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTGAAGCAGAGCCTGGTTaGCCTCCAGTGCAGCCTGTC +
Preference number: 5 (lower is better)
Translates to: QHCFIRPGQPGADTRLLSEAEPG*PPVQPV
Trigger: GACAGGCTGCACTGGAGGCAAACCAGGCTCTGCTTC...ACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS TCA 90 bp CACCAGCTCCGCAAAGGGACACCACTCATTGAGCTGGGGGAACCGTaGGACCAGCTGGTCCCCATAGGTGTGGATGTCAAAGGGCACATG +
Preference number: 5 (lower is better)
Translates to: HQLRKGTPLIELGEP*DQLVPIGVDVKGHM
Trigger: CATGTGCCCTTTGACATCCACACCTATGGGGACCAGCTGGTCTCACGGTTCCCCCAGCTCAATGAGTGGTGTCCCTTTGCGGAGCTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CAA 90 bp ACTACTCTGAGGAGCATCAGTTCTGCTCAGAGAGGGGAGGAACACAGAAGCTGCGAGCTGGCAACCCCATaGGCCCTGTCCTCCTGCACC +
Preference number: 5 (lower is better)
Translates to: TTLRSISSAQRGEEHRSCELATP*ALSSCT
Trigger: GGTGCAGGAGGACAGGGCCAATGGGGTTGCCAGCTC...GCAGCTTCTGTGTTCCTCCCCTCTCTGAGCAGAACTGATGCTCCTCAGAGTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CAA 90 bp CTCACTGGGCGTCTGATCATTCTTGAGATCCACGTTAGTCCGGGAGTCAGGGAAGAGCTGGCAACCCCATaGGCCCTGTCCTCCTGCACC +
Preference number: 5 (lower is better)
Translates to: LTGRLIILEIHVSPGVREELATP*ALSSCT
Trigger: GGTGCAGGAGGACAGGGCCAATGGGGTTGCCAGCTC...TTCCCTGACTCCCGGACTAACGTGGATCTCAAGAATGATCAGACGCCCAGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
CDS-3UTR CAA 90 bp GCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTTGGAAGTCCTGCAGCTaGGCAGCGCCCTTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: ALLGRASQEQTHGSSVHIWKSCS*AAPFLL
Trigger: CAAGAGGAAGGGCGCTGCCAAGCTGCAGGACTTCCA...AATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CAA 90 bp GAGGACCTCACTGGGCGTCTGATCATTCTTGAGATCCACGTTAGTCCGGGAGTCACCGAAGAGAGCTGCTaGGCCCGCCTCTTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: EDLTGRLIILEIHVSPGVTEESC*ARLFPE
Trigger: CTCTGGAAAGAGGCGGGCCAAGCAGCTCTCTTCGGT...GACTCCCGGACTAACGTGGATCTCAAGAATGATCAGACGCCCAGTGAGGTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
CDS-3UTR CAA 90 bp CAGCCAGGAGCAGACACACGGCTCCTCAGTACACATTCCCCCACCCCTGCCTCGCGGCTGTACAGGGGATaGTTGTTCTTCTCCATTTCA +
Preference number: 5 (lower is better)
Translates to: QPGADTRLLSTHSPTPASRLYRG*LFFSIS
Trigger: TGAAATGGAGAAGAACAACAATCCCCTGTACAGCCG...CGAGGCAGGGGTGGGGGAATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CAA 90 bp AGCTGGCAACCCCATTGGCCCTGTCCTCCTGCACCGAAGAGAGCTGCTTGGCCCCGGCTGTACAGGGGATaGTTGTTCTTCTCCATTTCA +
Preference number: 5 (lower is better)
Translates to: SWQPHWPCPPAPKRAAWPRLYRG*LFFSIS
Trigger: TGAAATGGAGAAGAACAACAATCCCCTGTACAGCCG...GGGCCAAGCAGCTCTCTTCGGTGCAGGAGGACAGGGCCAATGGGGTTGCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518394.5
CDS-3UTR CAA 90 bp CAGCTGCAAATGCCTGTTAAGCCTGAACGTGGGCTGGGTCCTTCAGATGGGTGGAAGGGACACCACTCATaGAGCTGGGGGAACCGTGAG +
Preference number: 5 (lower is better)
Translates to: QLQMPVKPERGLGPSDGWKGHHS*SWGNRE
Trigger: CTCACGGTTCCCCCAGCTCAATGAGTGGTGTCCCTT...CCACCCATCTGAAGGACCCAGCCCACGTTCAGGCTTAACAGGCATTTGCAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CAA 90 bp CAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTAAGGGACACCACTCATaGAGCTGCTCCTGGAGCAGA +
Preference number: 5 (lower is better)
Translates to: QHCFIRPGQPGADTRLLSKGHHS*SCSWSR
Trigger: TCTGCTCCAGGAGCAGCTCAATGAGTGGTGTCCCTT...ACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522304.1
CDS-3UTR CAA 90 bp TCTGCCCCAGACCAGTGGTCTGGGGCCAAGGCCATACCACTGTCCTCCTTGTGCCGGCTGTACAGGGGATaGTTGTTCTTCTCCATTTCA +
Preference number: 5 (lower is better)
Translates to: SAPDQWSGAKAIPLSSLCRLYRG*LFFSIS
Trigger: TGAAATGGAGAAGAACAACAATCCCCTGTACAGCCG...GCACAAGGAGGACAGTGGTATGGCCTTGGCCCCAGACCACTGGTCTGGGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CAA 90 bp GTGGTCTGGGGCCAAGGCCATACCACTGTCCTCCTTGTGCAAGGTGACTCGGCCAAAAGGAAGGATTTCTaGGCTCTAGGCTGGGTACAG +
Preference number: 5 (lower is better)
Translates to: VVWGQGHTTVLLVQGDSAKRKDF*ALGWVQ
Trigger: CTGTACCCAGCCTAGAGCCAAGAAATCCTTCCTTTT...GGCCGAGTCACCTTGCACAAGGAGGACAGTGGTATGGCCTTGGCCCCAGACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CAA 90 bp ACCACTCCATTGCCATCTACCTGCTCAACCCTGACGGCCTCTTCACGGATTACTTTCCACCCAAGACTGTaGGGTCTGACCGGCTCCACC +
Preference number: 5 (lower is better)
Translates to: TTPLPSTCSTLTASSRITFHPRL*GLTGST
Trigger: GGTGGAGCCGGTCAGACCCAACAGTCTTGGGTGGAA...AGTAATCCGTGAAGAGGCCGTCAGGGTTGAGCAGGTAGATGGCAATGGAGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CAA 90 bp GATGGCAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCCGGCTGTACAGGGGATaGTTGTTCTTCTCCATTTCA +
Preference number: 5 (lower is better)
Translates to: DGNTALLGRASQEQTHGSRLYRG*LFFSIS
Trigger: TGAAATGGAGAAGAACAACAATCCCCTGTACAGCCG...GGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTGCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CAA 90 bp CTCCTGACGCCTGTGCTTGTTTCCAGGAGCATCAGATCCATGCTGCTGCTGACTACACGGAAACTTCCATaGGCTGCTCCTCAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: LLTPVLVSRSIRSMLLLTTRKLP*AAPQSS
Trigger: GGAGGACTGAGGAGCAGCCAATGGAAGTTTCCGTGT...AGTCAGCAGCAGCATGGATCTGATGCTCCTGGAAACAAGCACAGGCGTCAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CAA 90 bp TCTTCACGGATTACTACGGCCGGAGCAGATCGGCTGAGCAGATCTCAGACAGTGTCGTGGACCACTCCATaGCCATCTACCTGCTCAACC +
Preference number: 5 (lower is better)
Translates to: SSRITTAGADRLSRSQTVSWTTP*PSTCST
Trigger: GGTTGAGCAGGTAGATGGCAATGGAGTGGTCCACGA...CACTGTCTGAGATCTGCTCAGCCGATCTGCTCCGGCCGTAGTAATCCGTGAAGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CAA 90 bp ACCACTCCATTGCCATCTACCTGCTCAACCCTGACGGCCTCTTCACGGATTACTAGGCAAGGCATGCACTaGGAATGCTTTCCGTCAGCA +
Preference number: 5 (lower is better)
Translates to: TTPLPSTCSTLTASSRITRQGMH*ECFPSA
Trigger: TGCTGACGGAAAGCATTCCAAGTGCATGCCTTGCCT...AGTAATCCGTGAAGAGGCCGTCAGGGTTGAGCAGGTAGATGGCAATGGAGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CAA 90 bp GATGGCAACACTGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCAAGTTCATTGTGGTCTaGCCTTCGTCAAAAGAAATG +
Preference number: 5 (lower is better)
Translates to: DGNTALLGRASQEQTHGSKFIVV*PSSKEM
Trigger: CATTTCTTTTGACGAAGGCAAGACCACAATGAACTT...GGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCAGTGTTGCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CAA 90 bp CAGGCTAGTCACAGTTACCGCGTGTACTACAATGCAGGCCCCAAGGATGAGGACCGGCTGTACAGGGGATaGTTGTTCTTCTCCATTTCA +
Preference number: 5 (lower is better)
Translates to: QASHSYRVYYNAGPKDEDRLYRG*LFFSIS
Trigger: TGAAATGGAGAAGAACAACAATCCCCTGTACAGCCG...GTCCTCATCCTTGGGGCCTGCATTGTAGTACACGCGGTAACTGTGACTAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CAA 90 bp ACAGAAGCTGCTCTTCAAAAGGGCTGGTTGCAGGACGGGCTGCAAGACAGGTGGAAGTTCATTGTGGTCTaGCCTTCGTCAAAAGAAATG +
Preference number: 5 (lower is better)
Translates to: TEAALQKGWLQDGLQDRWKFIVV*PSSKEM
Trigger: CATTTCTTTTGACGAAGGCAAGACCACAATGAACTT...CCACCTGTCTTGCAGCCCGTCCTGCAACCAGCCCTTTTGAAGAGCAGCTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS-3UTR CAA 90 bp TGCTTTATTAGGCCGGGCCAGCCAGGAGCAGACACACGGCTCCTCAGTACACATAAGTTCATTGTGGTCTaGCCTTCGTCAAAAGAAATG +
Preference number: 5 (lower is better)
Translates to: CFIRPGQPGADTRLLSTHKFIVV*PSSKEM
Trigger: CATTTCTTTTGACGAAGGCAAGACCACAATGAACTT...ATGTGTACTGAGGAGCCGTGTGTCTGCTCCTGGCTGGCCCGGCCTAATAAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS-3UTR CAA 90 bp CTGGCTCCTGACGCCTGTGCTTGTTTCCAGGAGCATCAGATCCATGCTGCTGCTAAGTTCATTGTGGTCTaGCCTTCGTCAAAAGAAATG +
Preference number: 5 (lower is better)
Translates to: LAPDACACFQEHQIHAAAKFIVV*PSSKEM
Trigger: CATTTCTTTTGACGAAGGCAAGACCACAATGAACTT...AGCAGCAGCATGGATCTGATGCTCCTGGAAACAAGCACAGGCGTCAGGAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420993.7
CDS-3UTR CAA 90 bp GAGGACCTCACTGGGCGTCTGATCATTCTTGAGATCCACGTTAGTCCGGGAGTCAAGTTCATTGTGGTCTaGCCTTCGTCAAAAGAAATG +
Preference number: 5 (lower is better)
Translates to: EDLTGRLIILEIHVSPGVKFIVV*PSSKEM
Trigger: CATTTCTTTTGACGAAGGCAAGACCACAATGAACTT...GACTCCCGGACTAACGTGGATCTCAAGAATGATCAGACGCCCAGTGAGGTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
CDS-3UTR CAA 90 bp TTAGTCCGGGAGTCAGGGAAGTCATCCAGCGACAGGAACTCATTCTCTGCCTCCAAGTTCATTGTGGTCTaGCCTTCGTCAAAAGAAATG +
Preference number: 5 (lower is better)
Translates to: LVRESGKSSSDRNSFSASKFIVV*PSSKEM
Trigger: CATTTCTTTTGACGAAGGCAAGACCACAATGAACTT...GGAGGCAGAGAATGAGTTCCTGTCGCTGGATGACTTCCCTGACTCCCGGACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418794.1
ENST00000518394.5
CDS-3UTR CAA 90 bp TCCACGTTAGTCCGGGAGTCAGGGAAGTCATCCAGCGACAGGAACTCATTCTCTTACCTGTACAGGGGATaGTTGTTCTTCTCCATTTCA +
Preference number: 5 (lower is better)
Translates to: STLVRESGKSSSDRNSFSYLYRG*LFFSIS
Trigger: TGAAATGGAGAAGAACAACAATCCCCTGTACAGGTA...AGAGAATGAGTTCCTGTCGCTGGATGACTTCCCTGACTCCCGGACTAACGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418794.1
CDS TCA 90 bp TACTGTAGACGCAGGCAGAGCCCTGGATCAACAACGCTGCCTCAATaGAGTTCATTGTGGTCTTGCCTTCGTCAAAAGAAATGCAGATCT +
Preference number: 5 (lower is better)
Translates to: YCRRRQSPGSTTLPQ*SSLWSCLRQKKCRS
Trigger: AGATCTGCATTTCTTTTGACGAAGGCAAGACCACAATGAACTTCATTGAGGCAGCGTTGTTGATCCAGGGCTCTGCCTGCGTCTACAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299821.15
ENST00000395698.7
ENST00000395701.7
ENST00000418794.1
ENST00000420993.7
ENST00000518394.5
CDS GCA 90 bp CACCTTCTTACTGTAGACGCAGGCAGAGCCCTGGATCAACAACGCTaGCTCAATGAAGTTCATTGTGGTCTTGCCTTCGTCAAAAGAAAT +
Preference number: 5 (lower is better)
Translates to: HLLTVDAGRALDQQR*LNEVHCGLAFVKRN
Trigger: ATTTCTTTTGACGAAGGCAAGACCACAATGAACTTCATTGAGGCAGCGTTGTTGATCCAGGGCTCTGCCTGCGTCTACAGTAAGAAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299821.15
ENST00000395698.7
ENST00000395701.7
ENST00000418794.1
ENST00000420993.7
ENST00000518394.5
CDS GCA 72 bp TCCGGGAGGGAACGGGCGGCAAAGGGACCGCAGGGCTaGCTTCCGAGGGGTACGGCGTCCTCAGCCCGCCAC +
Preference number: 6 (lower is better)
Translates to: SGRERAAKGPQG*LPRGTASSARH
Trigger: GTGGCGGGCTGAGGACGCCGTACCCCTCGGAAGGCAGCCCTGCGGTCCCTTTGCCGCCCGTTCCCTCCCGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299821.15
ENST00000395698.7
ENST00000395701.7
ENST00000418794.1
ENST00000420993.7
ENST00000518394.5
ENST00000523045.5
CDS CCA 72 bp GCAGGGCAGCACTCTGCTGCGGGCTCCTGGACTCCTTaGGCTCCAGAGCGGCCTTGGGGGCCGAGGCCTCAG +
Preference number: 6 (lower is better)
Translates to: AGQHSAAGSWTP*APERPWGPRPQ
Trigger: CTGAGGCCTCGGCCCCCAAGGCCGCTCTGGAGCCCAAGGAGTCCAGGAGCCCGCAGCAGAGTGCTGCCCTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000523045.5
CDS CAA 72 bp GGCAGGGCAGCACTCTGCTGCGGGCTCCTGGACTCCTaGGGCTCCAGAGCGGCCTTGGGGGCCGAGGCCTCA +
Preference number: 6 (lower is better)
Translates to: GRAALCCGLLDS*GSRAALGAEAS
Trigger: TGAGGCCTCGGCCCCCAAGGCCGCTCTGGAGCCCAAGGAGTCCAGGAGCCCGCAGCAGAGTGCTGCCCTGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000523045.5
CDS CAA 90 bp CCCACCTGCTGCGGGCTCCTGGACTCCTTGGGCTCCAGAGCGGCCTaGGGGGCCGAGGCCTCAGGAAGCTCTACTGCCTCCTCTGCATCC +
Preference number: 6 (lower is better)
Translates to: PTCCGLLDSLGSRAA*GAEASGSSTASSAS
Trigger: GGATGCAGAGGAGGCAGTAGAGCTTCCTGAGGCCTCGGCCCCCAAGGCCGCTCTGGAGCCCAAGGAGTCCAGGAGCCCGCAGCAGGTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS CCA 72 bp GCGGGCTCCTGGACTCCTTGGGCTCCAGAGCGGCCTTaGGGGCCGAGGCCTCAGGAAGCTCTACTGCCTCCT +
Preference number: 6 (lower is better)
Translates to: AGSWTPWAPERP*GPRPQEALLPP
Trigger: AGGAGGCAGTAGAGCTTCCTGAGGCCTCGGCCCCCAAGGCCGCTCTGGAGCCCAAGGAGTCCAGGAGCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299821.15
ENST00000395698.7
ENST00000395701.7
ENST00000420993.7
ENST00000523045.5
CDS CCA 72 bp CAGGGCAGCACTCAGCCCGACTGCAGAGAGGCGCCTTaGCAACCGGCGGCCATCCCAGGTTGCCGTGAGCTC +
Preference number: 6 (lower is better)
Translates to: QGSTQPDCREAP*QPAAIPGCREL
Trigger: GAGCTCACGGCAACCTGGGATGGCCGCCGGTTGCCAAGGCGCCTCTCTGCAGTCGGGCTGAGTGCTGCCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520297.5
CDS CAA 72 bp CCAGCCAGCTGGGCCGCCACGTCCACCTCCCAGTTCTaGGTGAGGTCGCGGATGGGCTGCAAGAGGTGGGCG +
Preference number: 6 (lower is better)
Translates to: PASWAATSTSQF*VRSRMGCKRWA
Trigger: CGCCCACCTCTTGCAGCCCATCCGCGACCTCACCAAGAACTGGGAGGTGGACGTGGCGGCCCAGCTGGCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518394.5
CDS CAA 90 bp GCACTCTGCTGCGGGCTCCTGGACTCCTTGGGCTCCAGAGCGGCCTaGGGGGCCGAGGCCTCAGGAAGCTCTACTGCCTCCTCTGCATCC +
Preference number: 6 (lower is better)
Translates to: ALCCGLLDSLGSRAA*GAEASGSSTASSAS
Trigger: GGATGCAGAGGAGGCAGTAGAGCTTCCTGAGGCCTCGGCCCCCAAGGCCGCTCTGGAGCCCAAGGAGTCCAGGAGCCCGCAGCAGAGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000523045.5
CDS TCA 72 bp CCAGCTGGGCCGCCACGTCCACCTCCCAGTTCTTGGTaGGGTCGCGGATGGGCTGCAAGAGGTGGGCGAAGC +
Preference number: 6 (lower is better)
Translates to: PAGPPRPPPSSW*GRGWAARGGRS
Trigger: GCTTCGCCCACCTCTTGCAGCCCATCCGCGACCTCACCAAGAACTGGGAGGTGGACGTGGCGGCCCAGCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299821.15
ENST00000395698.7
ENST00000395701.7
ENST00000418794.1
ENST00000420993.7
ENST00000518394.5
ENST00000523045.5
CDS CCA 72 bp CTGGGGCCCCCTCCCGCTCCCGCAGCATGTACCTCCTaGGCAGGGCAGCACTCTGCAAAGACAGTCACAGGG +
Preference number: 6 (lower is better)
Translates to: LGPPPAPAACTS*AGQHSAKTVTG
Trigger: CCCTGTGACTGTCTTTGCAGAGTGCTGCCCTGCCCAGGAGGTACATGCTGCGGGAGCGGGAGGGGGCCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522048.1
CDS CAA 90 bp AGATCTGATCCAGCCAGCTGGGCCGCCACGTCCACCTCCCAGTTCTaGGTGAGGTCGCGGATGGGCTGCAAGAGGTGGGCGAAGCGCGCC +
Preference number: 6 (lower is better)
Translates to: RSDPASWAATSTSQF*VRSRMGCKRWAKRA
Trigger: GGCGCGCTTCGCCCACCTCTTGCAGCCCATCCGCGACCTCACCAAGAACTGGGAGGTGGACGTGGCGGCCCAGCTGGCTGGATCAGATCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518394.5
CDS GCA 72 bp TCCACCTCCCAGTTCTTGGTGAGGTCGCGGATGGGCTaGAAGAGGTGGGCGAAGCGCGCCTCCACGTCCTCC +
Preference number: 6 (lower is better)
Translates to: STSQFLVRSRMG*KRWAKRASTSS
Trigger: GGAGGACGTGGAGGCGCGCTTCGCCCACCTCTTGCAGCCCATCCGCGACCTCACCAAGAACTGGGAGGTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299821.15
ENST00000395698.7
ENST00000395701.7
ENST00000418794.1
ENST00000420993.7
ENST00000518394.5
ENST00000523045.5
CDS CCA 72 bp CCTCAGTCCTCCCGGTGTCCTTCTGGGTCCCTGGCATaGGGGAAACGCCCGCTGGTTCCATGGGGGACATGC +
Preference number: 6 (lower is better)
Translates to: PQSSRCPSGSLA*GKRPLVPWGTC
Trigger: GCATGTCCCCCATGGAACCAGCGGGCGTTTCCCCCATGCCAGGGACCCAGAAGGACACCGGGAGGACTGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299821.15
ENST00000395698.7
ENST00000395701.7
ENST00000420993.7
ENST00000523045.5
CDS CCA 72 bp CTGCTCCTCAGTCCTCCCGGTGTCCTTCTGGGTCCCTaGCATGGGGGAAACGCCCGCTGGTTCCATGGGGGA +
Preference number: 6 (lower is better)
Translates to: LLLSPPGVLLGP*HGGNARWFHGG
Trigger: TCCCCCATGGAACCAGCGGGCGTTTCCCCCATGCCAGGGACCCAGAAGGACACCGGGAGGACTGAGGAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000299821.15
ENST00000395698.7
ENST00000395701.7
ENST00000420993.7
ENST00000523045.5
CDS CCA 72 bp GGGACATCGGCACTGCGTCAAGGTCAGCGGCTTCCCTaGGGTCTGCTCCCTCGGGCTCCATGTACTCCTCAG +
Preference number: 6 (lower is better)
Translates to: GTSALRQGQRLP*GLLPRAPCTPQ
Trigger: CTGAGGAGTACATGGAGCCCGAGGGAGCAGACCCCAGGGAAGCCGCTGACCTTGACGCAGTGCCGATGTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS CCA 72 bp GAGGCCAGCATGGAACGACACACCTCGAAGGCCGGCTaGCCAGCCACCAGCTCCGCAAAGGGACACCACTCA +
Preference number: 6 (lower is better)
Translates to: EASMERHTSKAG*PATSSAKGHHS
Trigger: TGAGTGGTGTCCCTTTGCGGAGCTGGTGGCTGGCCAGCCGGCCTTCGAGGTGTGTCGTTCCATGCTGGCCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000522304.1
CDS CCA 72 bp ATCCCAGGCTACTCACCAGCTGCAGGGAGGCCAGCATaGAACGACACACCTCGAAGGCCGGCTGGCCAGCCA +
Preference number: 6 (lower is better)
Translates to: IPGYSPAAGRPA*NDTPRRPAGQP
Trigger: TGGCTGGCCAGCCGGCCTTCGAGGTGTGTCGTTCCATGCTGGCCTCCCTGCAGCTGGTGAGTAGCCTGGGAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395701.7
CDS CCA 72 bp GTCATTGGCCTGCAGGGGTGGCACATCAGCAGGGTCTaGGGACCGTCTCCCCCTCCCACGTATCCCAGGCTA +
Preference number: 6 (lower is better)
Translates to: VIGLQGWHISRV*GPSPPPTYPRL
Trigger: TAGCCTGGGATACGTGGGAGGGGGAGACGGTCCCCAGACCCTGCTGATGTGCCACCCCTGCAGGCCAATGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395701.7
CDS TCA 72 bp GGCCAGCCACCAGCTCCGCAAAGGGACACCACTCATTaGGCTGGGGGAACCGTGAGACCAGCTGGTCCCCAT +
Preference number: 6 (lower is better)
Translates to: GQPPAPQRDTTH*AGGTVRPAGPH
Trigger: ATGGGGACCAGCTGGTCTCACGGTTCCCCCAGCTCAATGAGTGGTGTCCCTTTGCGGAGCTGGTGGCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS CCA 72 bp GTCCTTCTGGGTCCCTGGCATGGGGGAAACGCCCGCTaGTTCCATGGGGGACATGCCCTCTGGCTCCAACAT +
Preference number: 6 (lower is better)
Translates to: VLLGPWHGGNAR*FHGGHALWLQH
Trigger: ATGTTGGAGCCAGAGGGCATGTCCCCCATGGAACCAGCGGGCGTTTCCCCCATGCCAGGGACCCAGAAGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000299821.15
ENST00000395698.7
ENST00000395701.7
ENST00000420993.7
ENST00000523045.5
CDS CCA 72 bp CTGTGTAGTCATTGGCCAGCTGCAGGGAGGCCAGCATaGAACGACACACCTCGAAGGCCGGCTGGCCAGCCA +
Preference number: 6 (lower is better)
Translates to: LCSHWPAAGRPA*NDTPRRPAGQP
Trigger: TGGCTGGCCAGCCGGCCTTCGAGGTGTGTCGTTCCATGCTGGCCTCCCTGCAGCTGGCCAATGACTACACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000420993.7
ENST00000522304.1
CDS CCA 72 bp TGCCAGTTCACAGCTCAGGTTCTGCAGGCCTCCATGTaGGTCCCACCTGCTGCGGGCTCCTGGACTCCTTGG +
Preference number: 6 (lower is better)
Translates to: CQFTAQVLQASM*VPPAAGSWTPW
Trigger: CCAAGGAGTCCAGGAGCCCGCAGCAGGTGGGACCCACATGGAGGCCTGCAGAACCTGAGCTGTGAACTGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS CAA 72 bp TGGCCAGCCACCAGCTCCGCAAAGGGACACCACTCATaGAGCTGGGGGAACCGTGAGACCAGCTGGTCCCCA +
Preference number: 6 (lower is better)
Translates to: WPATSSAKGHHS*SWGNRETSWSP
Trigger: TGGGGACCAGCTGGTCTCACGGTTCCCCCAGCTCAATGAGTGGTGTCCCTTTGCGGAGCTGGTGGCTGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS CAA 90 bp AGAAGCCGAGTGCTGGGACAGGGCTCCTGCACACGGAAACTTCCATaGGCTGCTCCTCAGTCCTCCCGGTGTCCTTCTGGGTCCCTGGCA +
Preference number: 6 (lower is better)
Translates to: RSRVLGQGSCTRKLP*AAPQSSRCPSGSLA
Trigger: TGCCAGGGACCCAGAAGGACACCGGGAGGACTGAGGAGCAGCCAATGGAAGTTTCCGTGTGCAGGAGCCCTGTCCCAGCACTCGGCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299821.15
ENST00000395698.7
ENST00000395701.7
ENST00000420993.7
ENST00000523045.5
CDS CAA 90 bp ACCACTGTCCTCCTTGTGCAAGGTGACTCGGCCCCAGAGCCAGGGTaGCCAGTTCACAGCTCAGGTTCTGCAGGCCTCCATGTGGGTCCC +
Preference number: 6 (lower is better)
Translates to: TTVLLVQGDSAPEPG*PVHSSGSAGLHVGP
Trigger: GGGACCCACATGGAGGCCTGCAGAACCTGAGCTGTGAACTGGCAACCCTGGCTCTGGGGCCGAGTCACCTTGCACAAGGAGGACAGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS GCA 72 bp GGGACAGGGCTCCTGCACACGGAAACTTCCATTGGCTaGTCCTCAGTCCTCCCGGTGTCCTTCTGGGTCCCT +
Preference number: 6 (lower is better)
Translates to: GTGLLHTETSIG*SSVLPVSFWVP
Trigger: AGGGACCCAGAAGGACACCGGGAGGACTGAGGAGCAGCCAATGGAAGTTTCCGTGTGCAGGAGCCCTGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299821.15
ENST00000395698.7
ENST00000395701.7
ENST00000420993.7
ENST00000523045.5
CDS GCA 72 bp TGTCTGCAAAGGACGGACCCTTTCGCCGAAGCCGCCTaGTGTCGGCATGGTCTGCATAGGCAGCCAGGTACC +
Preference number: 6 (lower is better)
Translates to: CLQRTDPFAEAA*CRHGLHRQPGT
Trigger: GGTACCTGGCTGCCTATGCAGACCATGCCGACAGCAGGCGGCTTCGGCGAAAGGGTCCGTCCTTTGCAGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000520297.5
ENST00000522048.1
CDS GCA 72 bp TCTCCCCCTCCCACGTATCCCAGGCTACTCACCAGCTaGAGGGAGGCCAGCATGGAACGACACACCTCGAAG +
Preference number: 6 (lower is better)
Translates to: SPPPTYPRLLTS*REASMERHTSK
Trigger: CTTCGAGGTGTGTCGTTCCATGCTGGCCTCCCTGCAGCTGGTGAGTAGCCTGGGATACGTGGGAGGGGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395701.7
CDS CCA 72 bp AGGCAGCCAGGTACCACTGGTGGAAGTCCTGCAGCTTaGCAGCGCCCTTCCTCTTGCGCTTCTGTCCCAGAG +
Preference number: 6 (lower is better)
Translates to: RQPGTTGGSPAA*QRPSSCASVPE
Trigger: CTCTGGGACAGAAGCGCAAGAGGAAGGGCGCTGCCAAGCTGCAGGACTTCCACCAGTGGTACCTGGCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000520297.5
ENST00000522048.1
CDS CAA 72 bp GTGCTGGGACAGGGCTCCTGCACACGGAAACTTCCATaGGCTGCTCCTCAGTCCTCCCGGTGTCCTTCTGGG +
Preference number: 6 (lower is better)
Translates to: VLGQGSCTRKLP*AAPQSSRCPSG
Trigger: CCCAGAAGGACACCGGGAGGACTGAGGAGCAGCCAATGGAAGTTTCCGTGTGCAGGAGCCCTGTCCCAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299821.15
ENST00000395698.7
ENST00000395701.7
ENST00000420993.7
ENST00000523045.5
CDS GCA 72 bp TCCTTGTGCAAGGTGACTCGGCCCCAGAGCCAGGGTTaGCAGTTCACAGCTCAGGTTCTGCAGGCCTCCATG +
Preference number: 6 (lower is better)
Translates to: SLCKVTRPQSQG*QFTAQVLQASM
Trigger: CATGGAGGCCTGCAGAACCTGAGCTGTGAACTGGCAACCCTGGCTCTGGGGCCGAGTCACCTTGCACAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395698.7
CDS GCA 72 bp GGCTTAGACTCCAAGGAGTCAAAGGGGTCCAGGCTCTaGCAGGGGTCTGGAGTCTCCTTCACGCAGGATGCA +
Preference number: 6 (lower is better)
Translates to: GLDSKESKGSRL*QGSGVSFTQDA
Trigger: TGCATCCTGCGTGAAGGAGACTCCAGACCCCTGGCAGAGCCTGGACCCCTTTGACTCCTTGGAGTCTAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
ENST00000520297.5
ENST00000522048.1
CDS TCA 72 bp CGCAAAGGGACACCACTCATTGAGCTGGGGGAACCGTaGGACCAGCTGGTCCCCATAGGTGTGGATGTCAAA +
Preference number: 6 (lower is better)
Translates to: RKGTPLIELGEP*DQLVPIGVDVK
Trigger: TTTGACATCCACACCTATGGGGACCAGCTGGTCTCACGGTTCCCCCAGCTCAATGAGTGGTGTCCCTTTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299821.15
ENST00000395701.7
ENST00000420993.7
CDS GCA 72 bp ACTGTAGACGCAGGCAGAGCCCTGGATCAACAACGCTaGCTCAATGAAGTTCATTGTGGTCTTGCCTTCGTC +
Preference number: 6 (lower is better)
Translates to: TVDAGRALDQQR*LNEVHCGLAFV
Trigger: GACGAAGGCAAGACCACAATGAACTTCATTGAGGCAGCGTTGTTGATCCAGGGCTCTGCCTGCGTCTACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299821.15
ENST00000395698.7
ENST00000395701.7
ENST00000418794.1
ENST00000420993.7
ENST00000518394.5
CDS TCA 72 bp CTTTCCAGAGATGAAATCAAGGGCCTGGTAGACGAGTaGGTAGAGGTATTCCACCTCCTCCAGATACTCGCC +
Preference number: 6 (lower is better)
Translates to: LSRDEIKGLVDE*VEVFHLLQILA
Trigger: GGCGAGTATCTGGAGGAGGTGGAATACCTCTACTCACTCGTCTACCAGGCCCTTGATTTCATCTCTGGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523045.5
CDS TCA 72 bp CGCAGGCAGAGCCCTGGATCAACAACGCTGCCTCAATaGAGTTCATTGTGGTCTTGCCTTCGTCAAAAGAAA +
Preference number: 6 (lower is better)
Translates to: RRQSPGSTTLPQ*SSLWSCLRQKK
Trigger: TTTCTTTTGACGAAGGCAAGACCACAATGAACTTCATTGAGGCAGCGTTGTTGATCCAGGGCTCTGCCTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299821.15
ENST00000395698.7
ENST00000395701.7
ENST00000418794.1
ENST00000420993.7
ENST00000518394.5