RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NCAPG2 (Homo sapiens)

Ensembl gene IDs: ENSG00000146918

Ensembl transcript IDs: ENST00000356309.8, ENST00000409339.3, ENST00000409423.5, ENST00000432615.5, ENST00000441982.5, ENST00000467785.5, ENST00000472591.2, ENST00000474940.5, ENST00000475918.5, ENST00000491792.5, ENST00000621338.1

Found 476 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCAGGCGACAGTGGAGACCAAAGGCTCGCGGGGCAGCTGCTTCACTaGAGCCACGAGGCTTCCCACCCGGTGTCTGCAGAAGTGACTCCA +
Preference number: 1 (lower is better)
Translates to: SGDSGDQRLAGQLLH*SHEASHPVSAEVTP
Trigger: TGGAGTCACTTCTGCAGACACCGGGTGGGAAGCCTCGTGGCTTCAGTGAAGCAGCTGCCCCGCGAGCCTTTGGTCTCCACTGTCGCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR GCA 90 bp ATGGATGCTCAGGCGACAGTGGAGACCAAAGGCTCGCGGGGCAGCTaGTTCACTGAAGCCACGAGGCTTCCCACCCGGTGTCTGCAGAAG +
Preference number: 1 (lower is better)
Translates to: MDAQATVETKGSRGS*FTEATRLPTRCLQK
Trigger: CTTCTGCAGACACCGGGTGGGAAGCCTCGTGGCTTCAGTGAAGCAGCTGCCCCGCGAGCCTTTGGTCTCCACTGTCGCCTGAGCATCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR TCA 90 bp ACTGATAGAACCTCCTGGCAGCGGCGTGGTTCATCTGCACCAGGGTaGCACAGCGCTCGCACCAGACCTCCTCCGGCTGATTCACAGGCA +
Preference number: 1 (lower is better)
Translates to: TDRTSWQRRGSSAPG*HSARTRPPPADSQA
Trigger: TGCCTGTGAATCAGCCGGAGGAGGTCTGGTGCGAGCGCTGTGTCACCCTGGTGCAGATGAACCACGCCGCTGCCAGGAGGTTCTATCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR GCA 90 bp TGGGCATGCTCTGTGGGCAGCCAGTTGTCAACAAGCTCCAGAATGTaGCCCACCTGCCCCCAGGAGCAGAGGCAATCCAACAAAGTGCAG +
Preference number: 1 (lower is better)
Translates to: WACSVGSQLSTSSRM*PTCPQEQRQSNKVQ
Trigger: CTGCACTTTGTTGGATTGCCTCTGCTCCTGGGGGCAGGTGGGGCACATTCTGGAGCTTGTTGACAACTGGCTGCCCACAGAGCATGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR TCA 90 bp CAAAAGCTACCCTCACTTTCTCCGAATTGTCGTGGAGACTGTATCTaGGAGCTGGAAGGAGCTGCTCTAACAATGGGTGGCTCAGTTTGT +
Preference number: 1 (lower is better)
Translates to: QKLPSLSPNCRGDCI*ELEGAALTMGGSVC
Trigger: ACAAACTGAGCCACCCATTGTTAGAGCAGCTCCTTCCAGCTCTCAGATACAGTCTCCACGACAATTCGGAGAAAGTGAGGGTAGCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR CCA 90 bp AACAGCATGTCCACAAAAGCTACCCTCACTTTCTCCGAATTGTCGTaGAGACTGTATCTGAGAGCTGGAAGGAGCTGCTCTAACAATGGG +
Preference number: 1 (lower is better)
Translates to: NSMSTKATLTFSELS*RLYLRAGRSCSNNG
Trigger: CCCATTGTTAGAGCAGCTCCTTCCAGCTCTCAGATACAGTCTCCACGACAATTCGGAGAAAGTGAGGGTAGCTTTTGTGGACATGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR CCA 90 bp AGTGACTCCAGATCTGCCTTTGACGTTTCAAGGGCTTTCAAAAGATaGTTAAGTTTCTTCCGAGGAGCAGAGAGCAAGCACTCGCGGTTC +
Preference number: 1 (lower is better)
Translates to: SDSRSAFDVSRAFKR*LSFFRGAESKHSRF
Trigger: GAACCGCGAGTGCTTGCTCTCTGCTCCTCGGAAGAAACTTAACCATCTTTTGAAAGCCCTTGAAACGTCAAAGGCAGATCTGGAGTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR GCA 90 bp TTCTCCGAATTGTCGTGGAGACTGTATCTGAGAGCTGGAAGGAGCTaGTCTAACAATGGGTGGCTCAGTTTGTTGTCCAAAATCATTGGC +
Preference number: 1 (lower is better)
Translates to: FSELSWRLYLRAGRS*SNNGWLSLLSKIIG
Trigger: GCCAATGATTTTGGACAACAAACTGAGCCACCCATTGTTAGAGCAGCTCCTTCCAGCTCTCAGATACAGTCTCCACGACAATTCGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR GCA 90 bp ATAAAGCAGCCGCAGGCCTTCTTCCGGCTGCTTCCTGAAGCTCCGTaGAATACATTCCAACATTTTCTGAAATACTTTCTGGACTGTGTC +
Preference number: 1 (lower is better)
Translates to: IKQPQAFFRLLPEAP*NTFQHFLKYFLDCV
Trigger: GACACAGTCCAGAAAGTATTTCAGAAAATGTTGGAATGTATTGCACGGAGCTTCAGGAAGCAGCCGGAAGAAGGCCTGCGGCTGCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR CCA 90 bp AGTCAGCAGATACTCAATGTAGACCAATGCCAATTCAGGTTTGACTaGGCGTGTGTCATGGATCTGCACCCTACCTTTAGAAGCTGTGTT +
Preference number: 1 (lower is better)
Translates to: SQQILNVDQCQFRFD*ACVMDLHPTFRSCV
Trigger: AACACAGCTTCTAAAGGTAGGGTGCAGATCCATGACACACGCCCAGTCAAACCTGAATTGGCATTGGTCTACATTGAGTATCTGCTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR TCA 90 bp TCTGAACAGAATAAAGCAGCCGCAGGCCTTCTTCCGGCTGCTTCCTaGAGCTCCGTGCAATACATTCCAACATTTTCTGAAATACTTTCT +
Preference number: 1 (lower is better)
Translates to: SEQNKAAAGLLPAAS*SSVQYIPTFSEILS
Trigger: AGAAAGTATTTCAGAAAATGTTGGAATGTATTGCACGGAGCTTCAGGAAGCAGCCGGAAGAAGGCCTGCGGCTGCTTTATTCTGTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR CCA 90 bp TGGAGACTGTATCTGAGAGCTGGAAGGAGCTGCTCTAACAATGGGTaGCTCAGTTTGTTGTCCAAAATCATTGGCAGACACTTAAAGACA +
Preference number: 1 (lower is better)
Translates to: WRLYLRAGRSCSNNG*LSLLSKIIGRHLKT
Trigger: TGTCTTTAAGTGTCTGCCAATGATTTTGGACAACAAACTGAGCCACCCATTGTTAGAGCAGCTCCTTCCAGCTCTCAGATACAGTCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR TCA 90 bp TCCGGCTGCTTCCTGAAGCTCCGTGCAATACATTCCAACATTTTCTaGAATACTTTCTGGACTGTGTCCAACAGCATTGCAACTTCTTCA +
Preference number: 1 (lower is better)
Translates to: SGCFLKLRAIHSNIF*NTFWTVSNSIATSS
Trigger: TGAAGAAGTTGCAATGCTGTTGGACACAGTCCAGAAAGTATTTCAGAAAATGTTGGAATGTATTGCACGGAGCTTCAGGAAGCAGCCGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR-3UTR CCA 90 bp CACGAGGCTTCCCACCCGGTGTCTGCAGAAGTGACTCCAGATCTGCCTTTGACGCTCCTGGCAGCGGCGTaGTTCATCTGCACCAGGGTG +
Preference number: 2 (lower is better)
Translates to: HEASHPVSAEVTPDLPLTLLAAA*FICTRV
Trigger: CACCCTGGTGCAGATGAACCACGCCGCTGCCAGGAG...CGTCAAAGGCAGATCTGGAGTCACTTCTGCAGACACCGGGTGGGAAGCCTCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR-3UTR TCA 90 bp TGCAGTAGCTCTTGTCCACAGCGCCCTCCTCCCGGCTTCTCAGCGTGGAAATCACAGACCTCCTCCGGCTaGTTCACAGGCAGGAAAGAA +
Preference number: 2 (lower is better)
Translates to: CSSSCPQRPPPGFSAWKSQTSSG*FTGRKE
Trigger: TTCTTTCCTGCCTGTGAATCAGCCGGAGGAGGTCTG...TGATTTCCACGCTGAGAAGCCGGGAGGAGGGCGCTGTGGACAAGAGCTACTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR-3UTR TCA 90 bp TCAACCACAGGCCCAGCGATCAGAGTAGAAAGTACACCCCGGTGCACAGGGGTGTCTGTGTGCCGAGACTaGACAGCAGTAATGAACTCA +
Preference number: 2 (lower is better)
Translates to: STTGPAIRVESTPRCTGVSVCRD*TAVMNS
Trigger: TGAGTTCATTACTGCTGTTCAGTCTCGGCACACAGA...CACCCCTGTGCACCGGGGTGTACTTTCTACTCTGATCGCTGGGCCTGTGGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR-3UTR GCA 90 bp TCAACCACAGGCCCAGCGATCAGAGTAGAAAGTACACCCCGGTGCACAGGGGTGCGTGTGTCATGGATCTaGACCCTACCTTTAGAAGCT +
Preference number: 2 (lower is better)
Translates to: STTGPAIRVESTPRCTGVRVSWI*TLPLEA
Trigger: AGCTTCTAAAGGTAGGGTGCAGATCCATGACACACG...CACCCCTGTGCACCGGGGTGTACTTTCTACTCTGATCGCTGGGCCTGTGGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR-3UTR CCA 90 bp TCAACCACAGGCCCAGCGATCAGAGTAGAAAGTACACCCCGGTGCACAGGGGTGCAATTCAGGTTTGACTaGGCGTGTGTCATGGATCTG +
Preference number: 2 (lower is better)
Translates to: STTGPAIRVESTPRCTGVQFRFD*ACVMDL
Trigger: CAGATCCATGACACACGCCCAGTCAAACCTGAATTG...CACCCCTGTGCACCGGGGTGTACTTTCTACTCTGATCGCTGGGCCTGTGGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR-3UTR TCA 90 bp TGGATCTGCACCCTACCTTTAGAAGCTGTGTTGCTCTTGGCCTGGGCATGCTCTACAACGAACATCAGCTaGGCTCGTGTCAAATGCCAG +
Preference number: 2 (lower is better)
Translates to: WICTLPLEAVLLLAWACSTTNIS*ARVKCQ
Trigger: CTGGCATTTGACACGAGCTCAGCTGATGTTCGTTGT...AGAGCATGCCCAGGCCAAGAGCAACACAGCTTCTAAAGGTAGGGTGCAGATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR-3UTR TCA 90 bp TCCGAGGAGCAGAGAGCAAGCACTCGCGGTTCTTTGGATGAGTCAGCAGATACTCAGCCCTCACAGCTTTaGTCTTCAACAGCATGTCCA +
Preference number: 2 (lower is better)
Translates to: SEEQRASTRGSLDESADTQPSQL*SSTACP
Trigger: TGGACATGCTGTTGAAGATCAAAGCTGTGAGGGCTG...AGTATCTGCTGACTCATCCAAAGAACCGCGAGTGCTTGCTCTCTGCTCCTCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR-3UTR CCA 90 bp TGGATCTGCACCCTACCTTTAGAAGCTGTGTTGCTCTTGGCCTGGGCATGCTCTTCAGCTTTGCTATGTTaGTGCAGGCGGTGTGTTCGT +
Preference number: 2 (lower is better)
Translates to: WICTLPLEAVLLLAWACSSALLC*CRRCVR
Trigger: ACGAACACACCGCCTGCACCAACATAGCAAAGCTGA...AGAGCATGCCCAGGCCAAGAGCAACACAGCTTCTAAAGGTAGGGTGCAGATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR-3UTR TCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCTCATCTGCACCAGGGTaGCACAGCGCTCGCACCAGA +
Preference number: 2 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPSSAPG*HSARTR
Trigger: TCTGGTGCGAGCGCTGTGTCACCCTGGTGCAGATGA...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR-3UTR TCA 90 bp TCAGAAAGATGCTCTGGAGGGGTAAGCTCTTCTACGTCAGAAACCTTCCGTAGCGAGCAGAACTTGTGCTaGAGATGGATGCTCAGGCGA +
Preference number: 2 (lower is better)
Translates to: SERCSGGVSSSTSETFRSEQNLC*RWMLRR
Trigger: TCGCCTGAGCATCCATCTTCAGCACAAGTTCTGCTC...GCTACGGAAGGTTTCTGACGTAGAAGAGCTTACCCCTCCAGAGCATCTTTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR-3UTR TCA 90 bp TCAGAAAGATGCTCTGGAGGGGTAAGCTCTTCTACGTCAGAAACCTTCCGTAGCCTTCCGGCTGCTTCCTaGAGCTCCGTGCAATACATT +
Preference number: 2 (lower is better)
Translates to: SERCSGGVSSSTSETFRSLPAAS*SSVQYI
Trigger: AATGTATTGCACGGAGCTTCAGGAAGCAGCCGGAAG...GCTACGGAAGGTTTCTGACGTAGAAGAGCTTACCCCTCCAGAGCATCTTTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR-3UTR CCA 90 bp TGGATCTGCACCCTACCTTTAGAAGCTGTGTTGCTCTTGGCCTGGGCATGCTCTTCTCTCACTGCCCTCTaGATACAGGCATTTAAGCAA +
Preference number: 2 (lower is better)
Translates to: WICTLPLEAVLLLAWACSSLTAL*IQAFKQ
Trigger: TTGCTTAAATGCCTGTATCCAGAGGGCAGTGAGAGA...AGAGCATGCCCAGGCCAAGAGCAACACAGCTTCTAAAGGTAGGGTGCAGATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR-3UTR CCA 90 bp TCAGAAAGATGCTCTGGAGGGGTAAGCTCTTCTACGTCAGAAACCTTCCGTAGCGCACTCGCGGTTCTTTaGATGAGTCAGCAGATACTC +
Preference number: 2 (lower is better)
Translates to: SERCSGGVSSSTSETFRSALAVL*MSQQIL
Trigger: GAGTATCTGCTGACTCATCCAAAGAACCGCGAGTGC...GCTACGGAAGGTTTCTGACGTAGAAGAGCTTACCCCTCCAGAGCATCTTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR-3UTR GCA 90 bp TCTGAAATACTTTCTGGACTGTGTCCAACAGCATTGCAACTTCTTCATCTGAATGCGGCGTGGTTCATCTaGACCAGGGTGACACAGCGC +
Preference number: 2 (lower is better)
Translates to: SEILSGLCPTALQLLHLNAAWFI*TRVTQR
Trigger: GCGCTGTGTCACCCTGGTGCAGATGAACCACGCCGC...ATTCAGATGAAGAAGTTGCAATGCTGTTGGACACAGTCCAGAAAGTATTTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR-3UTR CCA 90 bp GAGACACAGGTCGAGAATCAGTTTCCAGACGAACCAGAATGTGCTCCATGGGACTGCTCTAACAATGGGTaGCTCAGTTTGTTGTCCAAA +
Preference number: 2 (lower is better)
Translates to: ETQVENQFPDEPECAPWDCSNNG*LSLLSK
Trigger: TTTGGACAACAAACTGAGCCACCCATTGTTAGAGCA...GTCCCATGGAGCACATTCTGGTTCGTCTGGAAACTGATTCTCGACCTGTGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR-3UTR CCA 90 bp CGTTTCAAGGGCTTTCAAAAGATGGTTAAGTTTCTTCCGAGGAGCAGAGAGCAAACTGATAGAACCTCCTaGCAGCGGCGTGGTTCATCT +
Preference number: 2 (lower is better)
Translates to: RFKGFQKMVKFLPRSREQTDRTS*QRRGSS
Trigger: AGATGAACCACGCCGCTGCCAGGAGGTTCTATCAGT...TTGCTCTCTGCTCCTCGGAAGAAACTTAACCATCTTTTGAAAGCCCTTGAAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR CAA 90 bp TCTAGTAAACCTGCCATGCATGCAACATCGTTTACTGACAGTGTTTaGTCCAGAACAGTCACATTCTCCTTCTCCCTTCCGTCCTCTTCC +
Preference number: 2 (lower is better)
Translates to: SSKPAMHATSFTDSV*SRTVTFSFSLPSSS
Trigger: GGAAGAGGACGGAAGGGAGAAGGAGAATGTGACTGTTCTGGACAAAACACTGTCAGTAAACGATGTTGCATGCATGGCAGGTTTACTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR-3UTR GCA 90 bp AAAAGCCAGTGTCTTCCAACATGGACAAATACACCTTTCCTTCTGAGCAGAACTAGAGCTGGAAGGAGCTaGTCTAACAATGGGTGGCTC +
Preference number: 2 (lower is better)
Translates to: KSQCLPTWTNTPFLLSRTRAGRS*SNNGWL
Trigger: GAGCCACCCATTGTTAGAGCAGCTCCTTCCAGCTCT...AGTTCTGCTCAGAAGGAAAGGTGTATTTGTCCATGTTGGAAGACACTGGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR-3UTR TCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCCTGGTCTTGAACTCCTaGCCTCAAGTGATCTATCTG +
Preference number: 2 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPLVLNS*PQVIYL
Trigger: CAGATAGATCACTTGAGGTCAGGAGTTCAAGACCAG...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356309.8
3UTR-3UTR GCA 90 bp TCAGAAAGATGCTCTGGAGGGGTAAGCTCTTCTACGTCAGAAACCTTCCGTAGCCTTCCTGAAGCTCCGTaGAATACATTCCAACATTTT +
Preference number: 2 (lower is better)
Translates to: SERCSGGVSSSTSETFRSLPEAP*NTFQHF
Trigger: AAAATGTTGGAATGTATTGCACGGAGCTTCAGGAAG...GCTACGGAAGGTTTCTGACGTAGAAGAGCTTACCCCTCCAGAGCATCTTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR-3UTR GCA 90 bp GACATTAGCATGAATAAAGGGATCTTGCAGCGATCATCCTTAAATACTTTCAGATGGAGGCTCTCTCACTaGCCTCTGGATACAGGCATT +
Preference number: 2 (lower is better)
Translates to: DISMNKGILQRSSLNTFRWRLSH*PLDTGI
Trigger: AATGCCTGTATCCAGAGGGCAGTGAGAGAGCCTCCA...TCTGAAAGTATTTAAGGATGATCGCTGCAAGATCCCTTTATTCATGCTAATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR CAA 90 bp AAGTGCTTATCTTTTAGAGATACATTCTTAGCAGCCCTCACAGCTTaGATCTTCAACAGCATGTCCACAAAAGCTACCCTCACTTTCTCC +
Preference number: 2 (lower is better)
Translates to: KCLSFRDTFLAALTA*IFNSMSTKATLTFS
Trigger: GGAGAAAGTGAGGGTAGCTTTTGTGGACATGCTGTTGAAGATCAAAGCTGTGAGGGCTGCTAAGAATGTATCTCTAAAAGATAAGCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR-3UTR GCA 90 bp AGTGACTCCAGATCTGCCTTTGACGTTTCAAGGGCTTTCAAAAGATGGTTAAGTAGACGAACCAGAATGTaGTCCATGGGACATATTTTC +
Preference number: 2 (lower is better)
Translates to: SDSRSAFDVSRAFKRWLSRRTRM*SMGHIF
Trigger: GAAAATATGTCCCATGGAGCACATTCTGGTTCGTCT...ACTTAACCATCTTTTGAAAGCCCTTGAAACGTCAAAGGCAGATCTGGAGTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR-3UTR CCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCCAGTGTCTTCCAACATaGACAAATACACCTTTCCTT +
Preference number: 2 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPQCLPT*TNTPFL
Trigger: AAGGAAAGGTGTATTTGTCCATGTTGGAAGACACTG...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR-3UTR CCA 90 bp AGTGACTCCAGATCTGCCTTTGACGTTTCAAGGGCTTTCAAAAGATGGTTAAGTTACTTTCAGATACTCTaGAAGCACAGAGGCAAACTT +
Preference number: 2 (lower is better)
Translates to: SDSRSAFDVSRAFKRWLSYFQIL*KHRGKL
Trigger: AAGTTTGCCTCTGTGCTTCCAGAGTATCTGAAAGTA...ACTTAACCATCTTTTGAAAGCCCTTGAAACGTCAAAGGCAGATCTGGAGTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR-3UTR CCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCCATGTCTGGAGATGTTaGCTTGGTTATGAATTCAAA +
Preference number: 2 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPHVWRC*LGYEFK
Trigger: TTTGAATTCATAACCAAGCCAACATCTCCAGACATG...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR-3UTR CCA 90 bp ACAAGGAACGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACAGAAATTACATTAGCTaGGTCTGGTGGTGTGTGCCT +
Preference number: 2 (lower is better)
Translates to: TRNERQGLGLFCYYIPPYRNYIS*VWWCVP
Trigger: AGGCACACACCACCAGACCCAGCTAATGTAATTTCT...GTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCGTTCCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
3UTR TCA 72 bp ACCTCCTGGCAGCGGCGTGGTTCATCTGCACCAGGGTaGCACAGCGCTCGCACCAGACCTCCTCCGGCTGAT +
Preference number: 3 (lower is better)
Translates to: TSWQRRGSSAPG*HSARTRPPPAD
Trigger: ATCAGCCGGAGGAGGTCTGGTGCGAGCGCTGTGTCACCCTGGTGCAGATGAACCACGCCGCTGCCAGGAGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR GCA 72 bp CAGGCGACAGTGGAGACCAAAGGCTCGCGGGGCAGCTaGTTCACTGAAGCCACGAGGCTTCCCACCCGGTGT +
Preference number: 3 (lower is better)
Translates to: QATVETKGSRGS*FTEATRLPTRC
Trigger: ACACCGGGTGGGAAGCCTCGTGGCTTCAGTGAAGCAGCTGCCCCGCGAGCCTTTGGTCTCCACTGTCGCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR TCA 72 bp AGTGGAGACCAAAGGCTCGCGGGGCAGCTGCTTCACTaGAGCCACGAGGCTTCCCACCCGGTGTCTGCAGAA +
Preference number: 3 (lower is better)
Translates to: SGDQRLAGQLLH*SHEASHPVSAE
Trigger: TTCTGCAGACACCGGGTGGGAAGCCTCGTGGCTTCAGTGAAGCAGCTGCCCCGCGAGCCTTTGGTCTCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR GCA 72 bp TCTGTGGGCAGCCAGTTGTCAACAAGCTCCAGAATGTaGCCCACCTGCCCCCAGGAGCAGAGGCAATCCAAC +
Preference number: 3 (lower is better)
Translates to: SVGSQLSTSSRM*PTCPQEQRQSN
Trigger: GTTGGATTGCCTCTGCTCCTGGGGGCAGGTGGGGCACATTCTGGAGCTTGTTGACAACTGGCTGCCCACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR-3UTR CAA 90 bp AGAAAGTACACCCCGGTGCACAGGGGTGTCTGTGTGCCGAGACTGAACAGCAGTCCTTTAGAAGCTGTGTaGCTCTTGGCCTGGGCATGC +
Preference number: 3 (lower is better)
Translates to: RKYTPVHRGVCVPRLNSSPLEAV*LLAWAC
Trigger: GCATGCCCAGGCCAAGAGCAACACAGCTTCTAAAGG...ACTGCTGTTCAGTCTCGGCACACAGACACCCCTGTGCACCGGGGTGTACTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR GCA 72 bp CCTTTCCTTCTGAGCAGAACTTGTGCTGAAGATGGATaGTCAGGCGACAGTGGAGACCAAAGGCTCGCGGGG +
Preference number: 3 (lower is better)
Translates to: PFLLSRTCAEDG*SGDSGDQRLAG
Trigger: CCCCGCGAGCCTTTGGTCTCCACTGTCGCCTGAGCATCCATCTTCAGCACAAGTTCTGCTCAGAAGGAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR-3UTR CAA 90 bp TCAACCACAGGCCCAGCGATCAGAGTAGAAAGTACACCCCGGTGCACAGGGGTGAATGCCAATTCAGGTTaGACTGGGCGTGTGTCATGG +
Preference number: 3 (lower is better)
Translates to: STTGPAIRVESTPRCTGVNANSG*TGRVSW
Trigger: CCATGACACACGCCCAGTCAAACCTGAATTGGCATT...CACCCCTGTGCACCGGGGTGTACTTTCTACTCTGATCGCTGGGCCTGTGGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR GCA 72 bp GCTTCACTGAAGCCACGAGGCTTCCCACCCGGTGTCTaGAGAAGTGACTCCAGATCTGCCTTTGACGTTTCA +
Preference number: 3 (lower is better)
Translates to: ASLKPRGFPPGV*RSDSRSAFDVS
Trigger: TGAAACGTCAAAGGCAGATCTGGAGTCACTTCTGCAGACACCGGGTGGGAAGCCTCGTGGCTTCAGTGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR-3UTR CAA 90 bp TGCAGTAGCTCTTGTCCACAGCGCCCTCCTCCCGGCTTCTCAGCGTGGAAATCAGGGTGGCTCAGTTTGTaGTCCAAAATCATTGGCAGA +
Preference number: 3 (lower is better)
Translates to: CSSSCPQRPPPGFSAWKSGWLSL*SKIIGR
Trigger: TCTGCCAATGATTTTGGACAACAAACTGAGCCACCC...TGATTTCCACGCTGAGAAGCCGGGAGGAGGGCGCTGTGGACAAGAGCTACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR-3UTR CAA 90 bp TCCGAGGAGCAGAGAGCAAGCACTCGCGGTTCTTTGGATGAGTCAGCAGATACTATCAGCTTTGCTATGTaGGTGCAGGCGGTGTGTTCG +
Preference number: 3 (lower is better)
Translates to: SEEQRASTRGSLDESADTISFAM*VQAVCS
Trigger: CGAACACACCGCCTGCACCAACATAGCAAAGCTGAT...AGTATCTGCTGACTCATCCAAAGAACCGCGAGTGCTTGCTCTCTGCTCCTCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR TCA 72 bp CCCTCACTTTCTCCGAATTGTCGTGGAGACTGTATCTaGGAGCTGGAAGGAGCTGCTCTAACAATGGGTGGC +
Preference number: 3 (lower is better)
Translates to: PSLSPNCRGDCI*ELEGAALTMGG
Trigger: GCCACCCATTGTTAGAGCAGCTCCTTCCAGCTCTCAGATACAGTCTCCACGACAATTCGGAGAAAGTGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR GCA 72 bp GCCAATTCAGGTTTGACTGGGCGTGTGTCATGGATCTaGACCCTACCTTTAGAAGCTGTGTTGCTCTTGGCC +
Preference number: 3 (lower is better)
Translates to: ANSGLTGRVSWI*TLPLEAVLLLA
Trigger: GGCCAAGAGCAACACAGCTTCTAAAGGTAGGGTGCAGATCCATGACACACGCCCAGTCAAACCTGAATTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR CCA 72 bp AGCCCTGTCTCCACTAATACAAAAATGAGCTGGGTGTaGCGGCGATGTGCCTGTATACCAGCTACTCAGCAG +
Preference number: 3 (lower is better)
Translates to: SPVSTNTKMSWV*RRCACIPATQQ
Trigger: CTGCTGAGTAGCTGGTATACAGGCACATCGCCGCCACACCCAGCTCATTTTTGTATTAGTGGAGACAGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409339.3
3UTR-3UTR CAA 90 bp TGGATCTGCACCCTACCTTTAGAAGCTGTGTTGCTCTTGGCCTGGGCATGCTCTAATGGGTGGCTCAGTTaGTTGTCCAAAATCATTGGC +
Preference number: 3 (lower is better)
Translates to: WICTLPLEAVLLLAWACSNGWLS*LSKIIG
Trigger: GCCAATGATTTTGGACAACAAACTGAGCCACCCATT...AGAGCATGCCCAGGCCAAGAGCAACACAGCTTCTAAAGGTAGGGTGCAGATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR CCA 72 bp TCCACAAAAGCTACCCTCACTTTCTCCGAATTGTCGTaGAGACTGTATCTGAGAGCTGGAAGGAGCTGCTCT +
Preference number: 3 (lower is better)
Translates to: STKATLTFSELS*RLYLRAGRSCS
Trigger: AGAGCAGCTCCTTCCAGCTCTCAGATACAGTCTCCACGACAATTCGGAGAAAGTGAGGGTAGCTTTTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR TCA 72 bp TGGCAGACACTTAAAGACAGAACAACGAACATCAGCTaGGCTCGTGTCAAATGCCAGTTCCCCAGTCACCTT +
Preference number: 3 (lower is better)
Translates to: WQTLKDRTTNIS*ARVKCQFPSHL
Trigger: AAGGTGACTGGGGAACTGGCATTTGACACGAGCTCAGCTGATGTTCGTTGTTCTGTCTTTAAGTGTCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR TCA 72 bp GCAGATACTCAATGTAGACCAATGCCAATTCAGGTTTaGCTGGGCGTGTGTCATGGATCTGCACCCTACCTT +
Preference number: 3 (lower is better)
Translates to: ADTQCRPMPIQV*LGVCHGSAPYL
Trigger: AAGGTAGGGTGCAGATCCATGACACACGCCCAGTCAAACCTGAATTGGCATTGGTCTACATTGAGTATCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR GCA 72 bp TTGTCGTGGAGACTGTATCTGAGAGCTGGAAGGAGCTaGTCTAACAATGGGTGGCTCAGTTTGTTGTCCAAA +
Preference number: 3 (lower is better)
Translates to: LSWRLYLRAGRS*SNNGWLSLLSK
Trigger: TTTGGACAACAAACTGAGCCACCCATTGTTAGAGCAGCTCCTTCCAGCTCTCAGATACAGTCTCCACGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR-3UTR CAA 90 bp AAAAGCCAGTGTCTTCCAACATGGACAAATACACCTTTCCTTCTGAGCAGAACTGCAGCCCTCACAGCTTaGATCTTCAACAGCATGTCC +
Preference number: 3 (lower is better)
Translates to: KSQCLPTWTNTPFLLSRTAALTA*IFNSMS
Trigger: GGACATGCTGTTGAAGATCAAAGCTGTGAGGGCTGC...AGTTCTGCTCAGAAGGAAAGGTGTATTTGTCCATGTTGGAAGACACTGGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR CCA 72 bp GAAGAGAGTATAGCGAAATGTTTAAAGTACAGAGAGTaGCCGGGCACGGGGAGTAATCCCAGCAATTTGAGA +
Preference number: 3 (lower is better)
Translates to: EESIAKCLKYRE*PGTGSNPSNLR
Trigger: TCTCAAATTGCTGGGATTACTCCCCGTGCCCGGCCACTCTCTGTACTTTAAACATTTCGCTATACTCTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
3UTR CCA 72 bp TATCTGAGAGCTGGAAGGAGCTGCTCTAACAATGGGTaGCTCAGTTTGTTGTCCAAAATCATTGGCAGACAC +
Preference number: 3 (lower is better)
Translates to: YLRAGRSCSNNG*LSLLSKIIGRH
Trigger: GTGTCTGCCAATGATTTTGGACAACAAACTGAGCCACCCATTGTTAGAGCAGCTCCTTCCAGCTCTCAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR CCA 72 bp ATACTCAATGTAGACCAATGCCAATTCAGGTTTGACTaGGCGTGTGTCATGGATCTGCACCCTACCTTTAGA +
Preference number: 3 (lower is better)
Translates to: ILNVDQCQFRFD*ACVMDLHPTFR
Trigger: TCTAAAGGTAGGGTGCAGATCCATGACACACGCCCAGTCAAACCTGAATTGGCATTGGTCTACATTGAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR CCA 72 bp AGATCTGCCTTTGACGTTTCAAGGGCTTTCAAAAGATaGTTAAGTTTCTTCCGAGGAGCAGAGAGCAAGCAC +
Preference number: 3 (lower is better)
Translates to: RSAFDVSRAFKR*LSFFRGAESKH
Trigger: GTGCTTGCTCTCTGCTCCTCGGAAGAAACTTAACCATCTTTTGAAAGCCCTTGAAACGTCAAAGGCAGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR-3UTR CAA 90 bp GCCTCACAAAGCTTCTCCTATCCATGTGCTAGTTATCTGGATAATTTGCTGATACTCACTTTCTCCGAATaGTCGTGGAGACTGTATCTG +
Preference number: 3 (lower is better)
Translates to: ASQSFSYPCASYLDNLLILTFSE*SWRLYL
Trigger: CAGATACAGTCTCCACGACAATTCGGAGAAAGTGAG...TATCAGCAAATTATCCAGATAACTAGCACATGGATAGGAGAAGCTTTGTGAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR-3UTR CAA 90 bp CGTTTCAAGGGCTTTCAAAAGATGGTTAAGTTTCTTCCGAGGAGCAGAGAGCAATTTACTGACAGTGTTTaGTCCAGAACAGTCACATTC +
Preference number: 3 (lower is better)
Translates to: RFKGFQKMVKFLPRSREQFTDSV*SRTVTF
Trigger: GAATGTGACTGTTCTGGACAAAACACTGTCAGTAAA...TTGCTCTCTGCTCCTCGGAAGAAACTTAACCATCTTTTGAAAGCCCTTGAAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR-3UTR CAA 90 bp CGTTTCAAGGGCTTTCAAAAGATGGTTAAGTTTCTTCCGAGGAGCAGAGAGCAAATGAATAAAGGGATCTaGCAGCGATCATCCTTAAAT +
Preference number: 3 (lower is better)
Translates to: RFKGFQKMVKFLPRSREQMNKGI*QRSSLN
Trigger: ATTTAAGGATGATCGCTGCAAGATCCCTTTATTCAT...TTGCTCTCTGCTCCTCGGAAGAAACTTAACCATCTTTTGAAAGCCCTTGAAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR TCA 72 bp CTGGACTGTGTCCAACAGCATTGCAACTTCTTCATCTaGATCTGTTTTCTGAATCAAGGAACTTCCAGTTAT +
Preference number: 3 (lower is better)
Translates to: LDCVQQHCNFFI*ICFLNQGTSSY
Trigger: ATAACTGGAAGTTCCTTGATTCAGAAAACAGATTCAGATGAAGAAGTTGCAATGCTGTTGGACACAGTCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR CCA 72 bp CTTGCAGCGATCATCCTTAAATACTTTCAGATACTCTaGAAGCACAGAGGCAAACTTGTTAATCGTGTAAAG +
Preference number: 3 (lower is better)
Translates to: LAAIILKYFQIL*KHRGKLVNRVK
Trigger: CTTTACACGATTAACAAGTTTGCCTCTGTGCTTCCAGAGTATCTGAAAGTATTTAAGGATGATCGCTGCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CCA 90 bp TGCAGTAGCTCTTGTCCACAGCGCCCTCCTCCCGGCTTCTCAGCGTGGAAATCACTCCTGGCAGCGGCGTaGTTCATCTGCACCAGGGTG +
Preference number: 4 (lower is better)
Translates to: CSSSCPQRPPPGFSAWKSLLAAA*FICTRV
Trigger: CACCCTGGTGCAGATGAACCACGCCGCTGCCAGGAG...TGATTTCCACGCTGAGAAGCCGGGAGGAGGGCGCTGTGGACAAGAGCTACTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CCA 90 bp GGTGACACAGCGCTCGCACCAGACCTCCTCCGGCTGATTCACAGGCAGGAAAGAATGCTCAGGCGACAGTaGAGACCAAAGGCTCGCGGG +
Preference number: 4 (lower is better)
Translates to: GDTALAPDLLRLIHRQERMLRRQ*RPKARG
Trigger: CCCGCGAGCCTTTGGTCTCCACTGTCGCCTGAGCAT...TCTTTCCTGCCTGTGAATCAGCCGGAGGAGGTCTGGTGCGAGCGCTGTGTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
3UTR CAA 72 bp TTGCTCTTGGCCTGGGCATGCTCTGTGGGCAGCCAGTaGTCAACAAGCTCCAGAATGTGCCCCACCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LLLAWACSVGSQ*STSSRMCPTCP
Trigger: GGGGCAGGTGGGGCACATTCTGGAGCTTGTTGACAACTGGCTGCCCACAGAGCATGCCCAGGCCAAGAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CCA 90 bp TCACCAGGCGCCGAGACACAGGTCGAGAATCAGTTTCCAGACGAACCAGAATGTCACACCACAGCTGAATaGGGGGACAGCAGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: SPGAETQVENQFPDEPECHTTAE*GDSRGR
Trigger: CCGGCCTCTGCTGTCCCCCCATTCAGCTGTGGTGTG...ACATTCTGGTTCGTCTGGAAACTGATTCTCGACCTGTGTCTCGGCGCCTGGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR TCA 90 bp TCCGAGGAGCAGAGAGCAAGCACTCGCGGTTCTTTGGATGAGTCAGCAGATACTTCATCTGCACCAGGGTaGCACAGCGCTCGCACCAGA +
Preference number: 4 (lower is better)
Translates to: SEEQRASTRGSLDESADTSSAPG*HSARTR
Trigger: TCTGGTGCGAGCGCTGTGTCACCCTGGTGCAGATGA...AGTATCTGCTGACTCATCCAAAGAACCGCGAGTGCTTGCTCTCTGCTCCTCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR TCA 90 bp TCAACCACAGGCCCAGCGATCAGAGTAGAAAGTACACCCCGGTGCACAGGGGTGCTTCCGGCTGCTTCCTaGAGCTCCGTGCAATACATT +
Preference number: 4 (lower is better)
Translates to: STTGPAIRVESTPRCTGVLPAAS*SSVQYI
Trigger: AATGTATTGCACGGAGCTTCAGGAAGCAGCCGGAAG...CACCCCTGTGCACCGGGGTGTACTTTCTACTCTGATCGCTGGGCCTGTGGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR GCA 90 bp GAGACACAGGTCGAGAATCAGTTTCCAGACGAACCAGAATGTGCTCCATGGGACGCGGCGTGGTTCATCTaGACCAGGGTGACACAGCGC +
Preference number: 4 (lower is better)
Translates to: ETQVENQFPDEPECAPWDAAWFI*TRVTQR
Trigger: GCGCTGTGTCACCCTGGTGCAGATGAACCACGCCGC...GTCCCATGGAGCACATTCTGGTTCGTCTGGAAACTGATTCTCGACCTGTGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CCA 90 bp GCAGAGGCAATCCAACAAAGTGCAGTAGCTCTTGTCCACAGCGCCCTCCTCCCGACTGATAGAACCTCCTaGCAGCGGCGTGGTTCATCT +
Preference number: 4 (lower is better)
Translates to: AEAIQQSAVALVHSALLPTDRTS*QRRGSS
Trigger: AGATGAACCACGCCGCTGCCAGGAGGTTCTATCAGT...CGGGAGGAGGGCGCTGTGGACAAGAGCTACTGCACTTTGTTGGATTGCCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CCA 90 bp TGGGCGTGTGTCATGGATCTGCACCCTACCTTTAGAAGCTGTGTTGCTCTTGGCGTGTTGCTCTTGGCCTaGGCATGCTCTGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: WACVMDLHPTFRSCVALGVLLLA*ACSVGS
Trigger: GCTGCCCACAGAGCATGCCCAGGCCAAGAGCAACAC...GCCAAGAGCAACACAGCTTCTAAAGGTAGGGTGCAGATCCATGACACACGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR GCA 90 bp TGGATCTGCACCCTACCTTTAGAAGCTGTGTTGCTCTTGGCCTGGGCATGCTCTTGGGCTTCCACTACCTaGCACCCATCCACTGGGCTT +
Preference number: 4 (lower is better)
Translates to: WICTLPLEAVLLLAWACSWASTT*HPSTGL
Trigger: AAGCCCAGTGGATGGGTGGCAGGTAGTGGAAGCCCA...AGAGCATGCCCAGGCCAAGAGCAACACAGCTTCTAAAGGTAGGGTGCAGATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR GCA 90 bp GGTGACACAGCGCTCGCACCAGACCTCCTCCGGCTGATTCACAGGCAGGAAAGAAACGTGAATCAGCTTTaGTATGTTGGTGCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: GDTALAPDLLRLIHRQERNVNQL*YVGAGG
Trigger: ACCGCCTGCACCAACATAGCAAAGCTGATTCACGTT...TCTTTCCTGCCTGTGAATCAGCCGGAGGAGGTCTGGTGCGAGCGCTGTGTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR GCA 90 bp TCCGAGGAGCAGAGAGCAAGCACTCGCGGTTCTTTGGATGAGTCAGCAGATACTGAAAGTACACCCCGGTaGACAGGGGTGTCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: SEEQRASTRGSLDESADTESTPR*TGVSVC
Trigger: GCACACAGACACCCCTGTGCACCGGGGTGTACTTTC...AGTATCTGCTGACTCATCCAAAGAACCGCGAGTGCTTGCTCTCTGCTCCTCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CCA 90 bp GGTGACACAGCGCTCGCACCAGACCTCCTCCGGCTGATTCACAGGCAGGAAAGAGTTTTCTGTGAACAGTaGCTGCAACCTCCCTCACTT +
Preference number: 4 (lower is better)
Translates to: GDTALAPDLLRLIHRQERVFCEQ*LQPPSL
Trigger: AAGTGAGGGAGGTTGCAGCCACTGTTCACAGAAAAC...TCTTTCCTGCCTGTGAATCAGCCGGAGGAGGTCTGGTGCGAGCGCTGTGTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR TCA 90 bp CACGAGGCTTCCCACCCGGTGTCTGCAGAAGTGACTCCAGATCTGCCTTTGACGGTATCCCGTGGAACATaGAGTCCTGGATGCAATCAT +
Preference number: 4 (lower is better)
Translates to: HEASHPVSAEVTPDLPLTVSRGT*SPGCNH
Trigger: ATGATTGCATCCAGGACTTCATGTTCCACGGGATAC...CGTCAAAGGCAGATCTGGAGTCACTTCTGCAGACACCGGGTGGGAAGCCTCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR TCA 90 bp TGGGCGTGTGTCATGGATCTGCACCCTACCTTTAGAAGCTGTGTTGCTCTTGGCCAGACCTCCTCCGGCTaGTTCACAGGCAGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: WACVMDLHPTFRSCVALGQTSSG*FTGRKE
Trigger: TTCTTTCCTGCCTGTGAATCAGCCGGAGGAGGTCTG...GCCAAGAGCAACACAGCTTCTAAAGGTAGGGTGCAGATCCATGACACACGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR GCA 90 bp CACGAGGCTTCCCACCCGGTGTCTGCAGAAGTGACTCCAGATCTGCCTTTGACGCGTGTGTCATGGATCTaGACCCTACCTTTAGAAGCT +
Preference number: 4 (lower is better)
Translates to: HEASHPVSAEVTPDLPLTRVSWI*TLPLEA
Trigger: AGCTTCTAAAGGTAGGGTGCAGATCCATGACACACG...CGTCAAAGGCAGATCTGGAGTCACTTCTGCAGACACCGGGTGGGAAGCCTCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR GCA 90 bp GAGACACAGGTCGAGAATCAGTTTCCAGACGAACCAGAATGTGCTCCATGGGACGCTTTGCTATGTTGGTaGAGGCGGTGTGTTCGTGGG +
Preference number: 4 (lower is better)
Translates to: ETQVENQFPDEPECAPWDALLCW*RRCVRG
Trigger: CCCACGAACACACCGCCTGCACCAACATAGCAAAGC...GTCCCATGGAGCACATTCTGGTTCGTCTGGAAACTGATTCTCGACCTGTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR GCA 90 bp TCAACAGCATGTCCACAAAAGCTACCCTCACTTTCTCCGAATTGTCGTGGAGACACAAGCTCCAGAATGTaGCCCACCTGCCCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: STACPQKLPSLSPNCRGDTSSRM*PTCPQE
Trigger: CTCCTGGGGGCAGGTGGGGCACATTCTGGAGCTTGT...GTCTCCACGACAATTCGGAGAAAGTGAGGGTAGCTTTTGTGGACATGCTGTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR GCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCGGCTCGCGGGGCAGCTaGTTCACTGAAGCCACGAGG +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPGSRGS*FTEATR
Trigger: CCTCGTGGCTTCAGTGAAGCAGCTGCCCCGCGAGCC...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR GCA 90 bp CACGAGGCTTCCCACCCGGTGTCTGCAGAAGTGACTCCAGATCTGCCTTTGACGAATCCCTTCACTGTTTaGATGATTCCAAGACTCCGC +
Preference number: 4 (lower is better)
Translates to: HEASHPVSAEVTPDLPLTNPFTV*MIPRLR
Trigger: GCGGAGTCTTGGAATCATGCAAACAGTGAAGGGATT...CGTCAAAGGCAGATCTGGAGTCACTTCTGCAGACACCGGGTGGGAAGCCTCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CCA 90 bp GGTGACACAGCGCTCGCACCAGACCTCCTCCGGCTGATTCACAGGCAGGAAAGATGTAATCCCTGTAACTaGTTTTTAATGGTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: GDTALAPDLLRLIHRQERCNPCN*FLMVPW
Trigger: CCACGGGACCATTAAAAACCAGTTACAGGGATTACA...TCTTTCCTGCCTGTGAATCAGCCGGAGGAGGTCTGGTGCGAGCGCTGTGTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CCA 90 bp GAGACACAGGTCGAGAATCAGTTTCCAGACGAACCAGAATGTGCTCCATGGGACGAACCTCCCGCACTTTaGAATGCACTGGAGACCTCC +
Preference number: 4 (lower is better)
Translates to: ETQVENQFPDEPECAPWDEPPAL*NALETS
Trigger: GGAGGTCTCCAGTGCATTCCAAAGTGCGGGAGGTTC...GTCCCATGGAGCACATTCTGGTTCGTCTGGAAACTGATTCTCGACCTGTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CCA 90 bp GCAGAGGCAATCCAACAAAGTGCAGTAGCTCTTGTCCACAGCGCCCTCCTCCCGTCTCTCACTGCCCTCTaGATACAGGCATTTAAGCAA +
Preference number: 4 (lower is better)
Translates to: AEAIQQSAVALVHSALLPSLTAL*IQAFKQ
Trigger: TTGCTTAAATGCCTGTATCCAGAGGGCAGTGAGAGA...CGGGAGGAGGGCGCTGTGGACAAGAGCTACTGCACTTTGTTGGATTGCCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCCAGGAGGTCTGGTACTaGGCTCGGGGACCCGCCGTT +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPQEVWY*ARGPAV
Trigger: AACGGCGGGTCCCCGAGCCCAGTACCAGACCTCCTG...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000409423.5
CDS-3UTR TCA 90 bp TCACCAGGCGCCGAGACACAGGTCGAGAATCAGTTTCCAGACGAACCAGAATGTCAGCCCTCACAGCTTTaGTCTTCAACAGCATGTCCA +
Preference number: 4 (lower is better)
Translates to: SPGAETQVENQFPDEPECQPSQL*SSTACP
Trigger: TGGACATGCTGTTGAAGATCAAAGCTGTGAGGGCTG...ACATTCTGGTTCGTCTGGAAACTGATTCTCGACCTGTGTCTCGGCGCCTGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR TCA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTGGGCAGCTGCTTCACTaGAGCCACGAGGCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: CHCAGPLILSNKQMDVVIGQLLH*SHEASH
Trigger: GTGGGAAGCCTCGTGGCTTCAGTGAAGCAGCTGCCC...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR TCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCGGGCAGCTGCTTCACTaGAGCCACGAGGCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPGQLLH*SHEASH
Trigger: GTGGGAAGCCTCGTGGCTTCAGTGAAGCAGCTGCCC...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR TCA 90 bp TCAACCACAGGCCCAGCGATCAGAGTAGAAAGTACACCCCGGTGCACAGGGGTGAACCTCCCTCACTTTTaGGCTTTTATGTTTACCTGC +
Preference number: 4 (lower is better)
Translates to: STTGPAIRVESTPRCTGVNLPHF*AFMFTC
Trigger: GCAGGTAAACATAAAAGCTCAAAAGTGAGGGAGGTT...CACCCCTGTGCACCGGGGTGTACTTTCTACTCTGATCGCTGGGCCTGTGGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR GCA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTGCGGCGTGGTTCATCTaGACCAGGGTGACACAGCGC +
Preference number: 4 (lower is better)
Translates to: CHCAGPLILSNKQMDVVIAAWFI*TRVTQR
Trigger: GCGCTGTGTCACCCTGGTGCAGATGAACCACGCCGC...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR GCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCGCGGCGTGGTTCATCTaGACCAGGGTGACACAGCGC +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPAAWFI*TRVTQR
Trigger: GCGCTGTGTCACCCTGGTGCAGATGAACCACGCCGC...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR GCA 90 bp CACTTAAAGACAGAACAACGAACATCAGCTGAGCTCGTGTCAAATGCCAGTTCCAGAATGTGCCCCACCTaGCCCCAGGAGCAGAGGCAA +
Preference number: 4 (lower is better)
Translates to: HLKTEQRTSAELVSNASSRMCPT*PQEQRQ
Trigger: TTGCCTCTGCTCCTGGGGGCAGGTGGGGCACATTCT...GGAACTGGCATTTGACACGAGCTCAGCTGATGTTCGTTGTTCTGTCTTTAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CCA 90 bp GGTGACACAGCGCTCGCACCAGACCTCCTCCGGCTGATTCACAGGCAGGAAAGAGAACTTCAGAGTTTCTaGCCTTTAATCCTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: GDTALAPDLLRLIHRQERELQSF*PLILSK
Trigger: TTTGGAGAGGATTAAAGGCCAGAAACTCTGAAGTTC...TCTTTCCTGCCTGTGAATCAGCCGGAGGAGGTCTGGTGCGAGCGCTGTGTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCCTCCTGGCAGCGGCGTaGTTCATCTGCACCAGGGTG +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPLLAAA*FICTRV
Trigger: CACCCTGGTGCAGATGAACCACGCCGCTGCCAGGAG...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR CCA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTCACACCACAGCTGAATaGGGGGACAGCAGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: CHCAGPLILSNKQMDVVIHTTAE*GDSRGR
Trigger: CCGGCCTCTGCTGTCCCCCCATTCAGCTGTGGTGTG...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR CCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCCACACCACAGCTGAATaGGGGGACAGCAGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPHTTAE*GDSRGR
Trigger: CCGGCCTCTGCTGTCCCCCCATTCAGCTGTGGTGTG...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR CCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCTTCGCACAGGAGGTCTaGTACTGGGCTCGGGGACCC +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPFAQEV*YWARGP
Trigger: GGGTCCCCGAGCCCAGTACCAGACCTCCTGTGCGAA...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000409423.5
CDS-3UTR TCA 90 bp GAGACACAGGTCGAGAATCAGTTTCCAGACGAACCAGAATGTGCTCCATGGGACACAACGAACATCAGCTaGGCTCGTGTCAAATGCCAG +
Preference number: 4 (lower is better)
Translates to: ETQVENQFPDEPECAPWDTTNIS*ARVKCQ
Trigger: CTGGCATTTGACACGAGCTCAGCTGATGTTCGTTGT...GTCCCATGGAGCACATTCTGGTTCGTCTGGAAACTGATTCTCGACCTGTGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR TCA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTTCATCTGCACCAGGGTaGCACAGCGCTCGCACCAGA +
Preference number: 4 (lower is better)
Translates to: CHCAGPLILSNKQMDVVISSAPG*HSARTR
Trigger: TCTGGTGCGAGCGCTGTGTCACCCTGGTGCAGATGA...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR TCA 90 bp TGGATCTGCACCCTACCTTTAGAAGCTGTGTTGCTCTTGGCCTGGGCATGCTCTTCGCGGTTCTTTGGATaGGTCAGCAGATACTCAATG +
Preference number: 4 (lower is better)
Translates to: WICTLPLEAVLLLAWACSSRFFG*VSRYSM
Trigger: CATTGAGTATCTGCTGACTCATCCAAAGAACCGCGA...AGAGCATGCCCAGGCCAAGAGCAACACAGCTTCTAAAGGTAGGGTGCAGATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR TCA 90 bp AGTGACTCCAGATCTGCCTTTGACGTTTCAAGGGCTTTCAAAAGATGGTTAAGTGGGCAGCTGCTTCACTaGAGCCACGAGGCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: SDSRSAFDVSRAFKRWLSGQLLH*SHEASH
Trigger: GTGGGAAGCCTCGTGGCTTCAGTGAAGCAGCTGCCC...ACTTAACCATCTTTTGAAAGCCCTTGAAACGTCAAAGGCAGATCTGGAGTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR TCA 90 bp TCACCAGGCGCCGAGACACAGGTCGAGAATCAGTTTCCAGACGAACCAGAATGTGTCTTTAGTTTTCTGTaGACAGTGGCTGCAACCTCC +
Preference number: 4 (lower is better)
Translates to: SPGAETQVENQFPDEPECVFSFL*TVAATS
Trigger: GGAGGTTGCAGCCACTGTTCACAGAAAACTAAAGAC...ACATTCTGGTTCGTCTGGAAACTGATTCTCGACCTGTGTCTCGGCGCCTGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR GCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCAGAATGTGCCCCACCTaGCCCCAGGAGCAGAGGCAA +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPRMCPT*PQEQRQ
Trigger: TTGCCTCTGCTCCTGGGGGCAGGTGGGGCACATTCT...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR GCA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTACAAGCTCCAGAATGTaGCCCACCTGCCCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: CHCAGPLILSNKQMDVVITSSRM*PTCPQE
Trigger: CTCCTGGGGGCAGGTGGGGCACATTCTGGAGCTTGT...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR GCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCACAAGCTCCAGAATGTaGCCCACCTGCCCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPTSSRM*PTCPQE
Trigger: CTCCTGGGGGCAGGTGGGGCACATTCTGGAGCTTGT...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR GCA 90 bp CTGAGAGCTGGAAGGAGCTGCTCTAACAATGGGTGGCTCAGTTTGTTGTCCAAATTCCCACCCGGTGTCTaGAGAAGTGACTCCAGATCT +
Preference number: 4 (lower is better)
Translates to: LRAGRSCSNNGWLSLLSKFPPGV*RSDSRS
Trigger: AGATCTGGAGTCACTTCTGCAGACACCGGGTGGGAA...TTTGGACAACAAACTGAGCCACCCATTGTTAGAGCAGCTCCTTCCAGCTCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR GCA 90 bp GCCTCACAAAGCTTCTCCTATCCATGTGCTAGTTATCTGGATAATTTGCTGATAGGCTCGCGGGGCAGCTaGTTCACTGAAGCCACGAGG +
Preference number: 4 (lower is better)
Translates to: ASQSFSYPCASYLDNLLIGSRGS*FTEATR
Trigger: CCTCGTGGCTTCAGTGAAGCAGCTGCCCCGCGAGCC...TATCAGCAAATTATCCAGATAACTAGCACATGGATAGGAGAAGCTTTGTGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCGTGTTGCTCTTGGCCTaGGCATGCTCTGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPVLLLA*ACSVGS
Trigger: GCTGCCCACAGAGCATGCCCAGGCCAAGAGCAACAC...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR CCA 90 bp TGGGCGTGTGTCATGGATCTGCACCCTACCTTTAGAAGCTGTGTTGCTCTTGGCCAATTCAGGTTTGACTaGGCGTGTGTCATGGATCTG +
Preference number: 4 (lower is better)
Translates to: WACVMDLHPTFRSCVALGQFRFD*ACVMDL
Trigger: CAGATCCATGACACACGCCCAGTCAAACCTGAATTG...GCCAAGAGCAACACAGCTTCTAAAGGTAGGGTGCAGATCCATGACACACGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CCA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTATGCTCAGGCGACAGTaGAGACCAAAGGCTCGCGGG +
Preference number: 4 (lower is better)
Translates to: CHCAGPLILSNKQMDVVIMLRRQ*RPKARG
Trigger: CCCGCGAGCCTTTGGTCTCCACTGTCGCCTGAGCAT...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR CCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCATGCTCAGGCGACAGTaGAGACCAAAGGCTCGCGGG +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPMLRRQ*RPKARG
Trigger: CCCGCGAGCCTTTGGTCTCCACTGTCGCCTGAGCAT...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR TCA 90 bp TCCGAGGAGCAGAGAGCAAGCACTCGCGGTTCTTTGGATGAGTCAGCAGATACTTCCTCCTTAGTAACATaGCAAAGGCTGTCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: SEEQRASTRGSLDESADTSSLVT*QRLSFL
Trigger: CAGGAAAGACAGCCTTTGTCATGTTACTAAGGAGGA...AGTATCTGCTGACTCATCCAAAGAACCGCGAGTGCTTGCTCTCTGCTCCTCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR GCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCTGGGCTTCCACTACCTaGCACCCATCCACTGGGCTT +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPWASTT*HPSTGL
Trigger: AAGCCCAGTGGATGGGTGGCAGGTAGTGGAAGCCCA...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
CDS-3UTR GCA 90 bp AGACTCTCTGACAAACCAAAATTAAGAGAATTAGTTGCCAGTAGACATGCCTTGGGCTCGCGGGGCAGCTaGTTCACTGAAGCCACGAGG +
Preference number: 4 (lower is better)
Translates to: RLSDKPKLRELVASRHALGSRGS*FTEATR
Trigger: CCTCGTGGCTTCAGTGAAGCAGCTGCCCCGCGAGCC...CAAGGCATGTCTACTGGCAACTAATTCTCTTAATTTTGGTTTGTCAGAGAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR GCA 90 bp TCAACAGCATGTCCACAAAAGCTACCCTCACTTTCTCCGAATTGTCGTGGAGACTGTGCTGAAGATGGATaGTCAGGCGACAGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: STACPQKLPSLSPNCRGDCAEDG*SGDSGD
Trigger: GTCTCCACTGTCGCCTGAGCATCCATCTTCAGCACA...GTCTCCACGACAATTCGGAGAAAGTGAGGGTAGCTTTTGTGGACATGCTGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR GCA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTAGGCCTTCTTCCGGCTaGTTCCTGAAGCTCCGTGCA +
Preference number: 4 (lower is better)
Translates to: CHCAGPLILSNKQMDVVIRPSSG*FLKLRA
Trigger: TGCACGGAGCTTCAGGAAGCAGCCGGAAGAAGGCCT...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR GCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCAGGCCTTCTTCCGGCTaGTTCCTGAAGCTCCGTGCA +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPRPSSG*FLKLRA
Trigger: TGCACGGAGCTTCAGGAAGCAGCCGGAAGAAGGCCT...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR GCA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTGAAAGTACACCCCGGTaGACAGGGGTGTCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: CHCAGPLILSNKQMDVVIESTPR*TGVSVC
Trigger: GCACACAGACACCCCTGTGCACCGGGGTGTACTTTC...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR GCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCGAAAGTACACCCCGGTaGACAGGGGTGTCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPESTPR*TGVSVC
Trigger: GCACACAGACACCCCTGTGCACCGGGGTGTACTTTC...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
CDS-3UTR GCA 90 bp CACTTTCTCCGAATTGTCGTGGAGACTGTATCTGAGAGCTGGAAGGAGCTGCTCGGAAGATCAGAAAGATaGTCTGGAGGGGTAAGCTCT +
Preference number: 4 (lower is better)
Translates to: HFLRIVVETVSESWKELLGRSER*SGGVSS
Trigger: AGAGCTTACCCCTCCAGAGCATCTTTCTGATCTTCC...GAGCAGCTCCTTCCAGCTCTCAGATACAGTCTCCACGACAATTCGGAGAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR GCA 90 bp CACTTTCTCCGAATTGTCGTGGAGACTGTATCTGAGAGCTGGAAGGAGCTGCTCATAACCAGGATAATATaGACAGCAGCCGTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: HFLRIVVETVSESWKELLITRII*TAAVRH
Trigger: GTGCCTCACGGCTGCTGTGCATATTATCCTGGTTAT...GAGCAGCTCCTTCCAGCTCTCAGATACAGTCTCCACGACAATTCGGAGAAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CCA 90 bp TCCGAGGAGCAGAGAGCAAGCACTCGCGGTTCTTTGGATGAGTCAGCAGATACTTTCTCCGAATTGTCGTaGAGACTGTATCTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: SEEQRASTRGSLDESADTFSELS*RLYLRA
Trigger: AGCTCTCAGATACAGTCTCCACGACAATTCGGAGAA...AGTATCTGCTGACTCATCCAAAGAACCGCGAGTGCTTGCTCTCTGCTCCTCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR TCA 90 bp TCCGAGGAGCAGAGAGCAAGCACTCGCGGTTCTTTGGATGAGTCAGCAGATACTAAGCAATATAAAGCTTaGTGGATACGCCAAAGCCGA +
Preference number: 4 (lower is better)
Translates to: SEEQRASTRGSLDESADTKQYKA*WIRQSR
Trigger: TCGGCTTTGGCGTATCCATCAAGCTTTATATTGCTT...AGTATCTGCTGACTCATCCAAAGAACCGCGAGTGCTTGCTCTCTGCTCCTCGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR TCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCCAGACCTCCTCCGGCTaGTTCACAGGCAGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPQTSSG*FTGRKE
Trigger: TTCTTTCCTGCCTGTGAATCAGCCGGAGGAGGTCTG...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR TCA 90 bp AGACTCTCTGACAAACCAAAATTAAGAGAATTAGTTGCCAGTAGACATGCCTTGGGGCAGCTGCTTCACTaGAGCCACGAGGCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: RLSDKPKLRELVASRHALGQLLH*SHEASH
Trigger: GTGGGAAGCCTCGTGGCTTCAGTGAAGCAGCTGCCC...CAAGGCATGTCTACTGGCAACTAATTCTCTTAATTTTGGTTTGTCAGAGAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR TCA 90 bp TCCGAGGAGCAGAGAGCAAGCACTCGCGGTTCTTTGGATGAGTCAGCAGATACTAACAAAAGAACAATCTaGTCCCAGCTGCAGATTCTG +
Preference number: 4 (lower is better)
Translates to: SEEQRASTRGSLDESADTNKRTI*SQLQIL
Trigger: CAGAATCTGCAGCTGGGATCAGATTGTTCTTTTGTT...AGTATCTGCTGACTCATCCAAAGAACCGCGAGTGCTTGCTCTCTGCTCCTCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR GCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCTCCCGCACTTTGGAATaGACTGGAGACCTCCTCGGA +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPSRTLE*TGDLLG
Trigger: TCCGAGGAGGTCTCCAGTGCATTCCAAAGTGCGGGA...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR GCA 90 bp AAGAAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACGCGGCGTGGTTCATCTaGACCAGGGTGACACAGCGC +
Preference number: 4 (lower is better)
Translates to: KKFSGGKEKNIGQNLDQHAAWFI*TRVTQR
Trigger: GCGCTGTGTCACCCTGGTGCAGATGAACCACGCCGC...GTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR GCA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTGCTTTGCTATGTTGGTaGAGGCGGTGTGTTCGTGGG +
Preference number: 4 (lower is better)
Translates to: CHCAGPLILSNKQMDVVIALLCW*RRCVRG
Trigger: CCCACGAACACACCGCCTGCACCAACATAGCAAAGC...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR GCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCGCTTTGCTATGTTGGTaGAGGCGGTGTGTTCGTGGG +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPALLCW*RRCVRG
Trigger: CCCACGAACACACCGCCTGCACCAACATAGCAAAGC...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR CCA 90 bp TGCAGTAGCTCTTGTCCACAGCGCCCTCCTCCCGGCTTCTCAGCGTGGAAATCATTTTTAATGGTCCCGTaGATCATTTTGATGAAGTTG +
Preference number: 4 (lower is better)
Translates to: CSSSCPQRPPPGFSAWKSFLMVP*IILMKL
Trigger: CAACTTCATCAAAATGATCCACGGGACCATTAAAAA...TGATTTCCACGCTGAGAAGCCGGGAGGAGGGCGCTGTGGACAAGAGCTACTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CCA 90 bp TCAACAGCATGTCCACAAAAGCTACCCTCACTTTCTCCGAATTGTCGTGGAGACGGAAGGTGTATCCCGTaGAACATGAAGTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: STACPQKLPSLSPNCRGDGRCIP*NMKSWM
Trigger: CATCCAGGACTTCATGTTCCACGGGATACACCTTCC...GTCTCCACGACAATTCGGAGAAAGTGAGGGTAGCTTTTGTGGACATGCTGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CCA 90 bp CACTTAAAGACAGAACAACGAACATCAGCTGAGCTCGTGTCAAATGCCAGTTCCCACTTTGGAATGCACTaGAGACCTCCTCGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: HLKTEQRTSAELVSNASSHFGMH*RPPRKV
Trigger: CACCTTCCGAGGAGGTCTCCAGTGCATTCCAAAGTG...GGAACTGGCATTTGACACGAGCTCAGCTGATGTTCGTTGTTCTGTCTTTAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCGAACCTCCCGCACTTTaGAATGCACTGGAGACCTCC +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPEPPAL*NALETS
Trigger: GGAGGTCTCCAGTGCATTCCAAAGTGCGGGAGGTTC...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR CCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCCACCAAGGATCCCTGTaGAACGGACCATCGGGTAAG +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPHQGSL*NGPSGK
Trigger: CTTACCCGATGGTCCGTTCCACAGGGATCCTTGGTG...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000441982.5
CDS-3UTR CCA 90 bp AGACTCTCTGACAAACCAAAATTAAGAGAATTAGTTGCCAGTAGACATGCCTTGCTCCTGGCAGCGGCGTaGTTCATCTGCACCAGGGTG +
Preference number: 4 (lower is better)
Translates to: RLSDKPKLRELVASRHALLLAAA*FICTRV
Trigger: CACCCTGGTGCAGATGAACCACGCCGCTGCCAGGAG...CAAGGCATGTCTACTGGCAACTAATTCTCTTAATTTTGGTTTGTCAGAGAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CCA 90 bp CGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACCTGCAAAGCACACCACAGCTGAATaGGGGGACAGCAGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: REARIRIILLLYTTLPAKHTTAE*GDSRGR
Trigger: CCGGCCTCTGCTGTCCCCCCATTCAGCTGTGGTGTG...CTTTGCAGGTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR TCA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTGAGCAGAACTTGTGCTaGAGATGGATGCTCAGGCGA +
Preference number: 4 (lower is better)
Translates to: CHCAGPLILSNKQMDVVIEQNLC*RWMLRR
Trigger: TCGCCTGAGCATCCATCTTCAGCACAAGTTCTGCTC...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR TCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCGAGCAGAACTTGTGCTaGAGATGGATGCTCAGGCGA +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPEQNLC*RWMLRR
Trigger: TCGCCTGAGCATCCATCTTCAGCACAAGTTCTGCTC...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR TCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCCTTCCGGCTGCTTCCTaGAGCTCCGTGCAATACATT +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPLPAAS*SSVQYI
Trigger: AATGTATTGCACGGAGCTTCAGGAAGCAGCCGGAAG...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR TCA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTACCTTCCGTAGCTGGTaGCTTATCTCAACCACAGGC +
Preference number: 4 (lower is better)
Translates to: CHCAGPLILSNKQMDVVITFRSW*LISTTG
Trigger: GCCTGTGGTTGAGATAAGTCACCAGCTACGGAAGGT...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR TCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCACCTTCCGTAGCTGGTaGCTTATCTCAACCACAGGC +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPTFRSW*LISTTG
Trigger: GCCTGTGGTTGAGATAAGTCACCAGCTACGGAAGGT...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
CDS-3UTR TCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCTATGCACAGCAGCCGTaGGGCACACAATGCCTTCAA +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPYAQQP*GTQCLQ
Trigger: TTGAAGGCATTGTGTGCCTCACGGCTGCTGTGCATA...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR GCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCAGAGCTGGAAGGAGCTaGTCTAACAATGGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPRAGRS*SNNGWL
Trigger: GAGCCACCCATTGTTAGAGCAGCTCCTTCCAGCTCT...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR GCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCTGGAGGCTCTCTCACTaGCCTCTGGATACAGGCATT +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPWRLSH*PLDTGI
Trigger: AATGCCTGTATCCAGAGGGCAGTGAGAGAGCCTCCA...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR GCA 90 bp AGACTCTCTGACAAACCAAAATTAAGAGAATTAGTTGCCAGTAGACATGCCTTGAGAATGTGCCCCACCTaGCCCCAGGAGCAGAGGCAA +
Preference number: 4 (lower is better)
Translates to: RLSDKPKLRELVASRHALRMCPT*PQEQRQ
Trigger: TTGCCTCTGCTCCTGGGGGCAGGTGGGGCACATTCT...CAAGGCATGTCTACTGGCAACTAATTCTCTTAATTTTGGTTTGTCAGAGAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR GCA 90 bp CGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACCTGCAAAGACAAGCTCCAGAATGTaGCCCACCTGCCCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: REARIRIILLLYTTLPAKTSSRM*PTCPQE
Trigger: CTCCTGGGGGCAGGTGGGGCACATTCTGGAGCTTGT...CTTTGCAGGTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR GCA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTTTCCCACCCGGTGTCTaGAGAAGTGACTCCAGATCT +
Preference number: 4 (lower is better)
Translates to: CHCAGPLILSNKQMDVVIFPPGV*RSDSRS
Trigger: AGATCTGGAGTCACTTCTGCAGACACCGGGTGGGAA...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR GCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCTTCCCACCCGGTGTCTaGAGAAGTGACTCCAGATCT +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPFPPGV*RSDSRS
Trigger: AGATCTGGAGTCACTTCTGCAGACACCGGGTGGGAA...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR GCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCTGTGCTGAAGATGGATaGTCAGGCGACAGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPCAEDG*SGDSGD
Trigger: GTCTCCACTGTCGCCTGAGCATCCATCTTCAGCACA...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR GCA 90 bp GCCTCACAAAGCTTCTCCTATCCATGTGCTAGTTATCTGGATAATTTGCTGATAAGGCCTTCTTCCGGCTaGTTCCTGAAGCTCCGTGCA +
Preference number: 4 (lower is better)
Translates to: ASQSFSYPCASYLDNLLIRPSSG*FLKLRA
Trigger: TGCACGGAGCTTCAGGAAGCAGCCGGAAGAAGGCCT...TATCAGCAAATTATCCAGATAACTAGCACATGGATAGGAGAAGCTTTGTGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR GCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCAGTGATCTATCTGCCTaGCTCAGCCTCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPSDLSA*LSLPKC
Trigger: GCACTTTGGGAGGCTGAGGCAGGCAGATAGATCACT...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR CCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCCACTTTGGAATGCACTaGAGACCTCCTCGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPHFGMH*RPPRKV
Trigger: CACCTTCCGAGGAGGTCTCCAGTGCATTCCAAAGTG...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR CCA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTACTGATAGAACCTCCTaGCAGCGGCGTGGTTCATCT +
Preference number: 4 (lower is better)
Translates to: CHCAGPLILSNKQMDVVITDRTS*QRRGSS
Trigger: AGATGAACCACGCCGCTGCCAGGAGGTTCTATCAGT...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR CCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCACTGATAGAACCTCCTaGCAGCGGCGTGGTTCATCT +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPTDRTS*QRRGSS
Trigger: AGATGAACCACGCCGCTGCCAGGAGGTTCTATCAGT...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR CCA 90 bp TGGATCTGCACCCTACCTTTAGAAGCTGTGTTGCTCTTGGCCTGGGCATGCTCTTACTTTCAGATACTCTaGAAGCACAGAGGCAAACTT +
Preference number: 4 (lower is better)
Translates to: WICTLPLEAVLLLAWACSYFQIL*KHRGKL
Trigger: AAGTTTGCCTCTGTGCTTCCAGAGTATCTGAAAGTA...AGAGCATGCCCAGGCCAAGAGCAACACAGCTTCTAAAGGTAGGGTGCAGATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CCA 90 bp AAGAAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACGTGTTGCTCTTGGCCTaGGCATGCTCTGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: KKFSGGKEKNIGQNLDQHVLLLA*ACSVGS
Trigger: GCTGCCCACAGAGCATGCCCAGGCCAAGAGCAACAC...GTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CCA 90 bp CGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACCTGCAAAGATGCTCAGGCGACAGTaGAGACCAAAGGCTCGCGGG +
Preference number: 4 (lower is better)
Translates to: REARIRIILLLYTTLPAKMLRRQ*RPKARG
Trigger: CCCGCGAGCCTTTGGTCTCCACTGTCGCCTGAGCAT...CTTTGCAGGTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CCA 90 bp AAAAGCCAGTGTCTTCCAACATGGACAAATACACCTTTCCTTCTGAGCAGAACTCCCTTAGCAAGATGCTaGCTCGGCAGAGCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: KSQCLPTWTNTPFLLSRTPLARC*LGRAEL
Trigger: CAACTCAGCTCTGCCGAGCCAGCATCTTGCTAAGGG...AGTTCTGCTCAGAAGGAAAGGTGTATTTGTCCATGTTGGAAGACACTGGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR TCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCACAACGAACATCAGCTaGGCTCGTGTCAAATGCCAG +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPTTNIS*ARVKCQ
Trigger: CTGGCATTTGACACGAGCTCAGCTGATGTTCGTTGT...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR TCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCCAGCCCTCACAGCTTTaGTCTTCAACAGCATGTCCA +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPQPSQL*SSTACP
Trigger: TGGACATGCTGTTGAAGATCAAAGCTGTGAGGGCTG...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR TCA 90 bp AAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACAAATCATCTGCACCAGGGTaGCACAGCGCTCGCACCAGA +
Preference number: 4 (lower is better)
Translates to: KFSGGKEKNIGQNLDQHKSSAPG*HSARTR
Trigger: TCTGGTGCGAGCGCTGTGTCACCCTGGTGCAGATGA...TTTGTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR TCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCATGCCAATTCAGGTTTaGCTGGGCGTGTGTCATGGA +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPMPIQV*LGVCHG
Trigger: TCCATGACACACGCCCAGTCAAACCTGAATTGGCAT...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR TCA 90 bp TGGATCTGCACCCTACCTTTAGAAGCTGTGTTGCTCTTGGCCTGGGCATGCTCTTCTGAATCTGTTTTCTaGATCAAGGAACTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: WICTLPLEAVLLLAWACSSESVF*IKELPV
Trigger: AACTGGAAGTTCCTTGATTCAGAAAACAGATTCAGA...AGAGCATGCCCAGGCCAAGAGCAACACAGCTTCTAAAGGTAGGGTGCAGATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR TCA 90 bp AGTGACTCCAGATCTGCCTTTGACGTTTCAAGGGCTTTCAAAAGATGGTTAAGTACCTTCCGTAGCTGGTaGCTTATCTCAACCACAGGC +
Preference number: 4 (lower is better)
Translates to: SDSRSAFDVSRAFKRWLSTFRSW*LISTTG
Trigger: GCCTGTGGTTGAGATAAGTCACCAGCTACGGAAGGT...ACTTAACCATCTTTTGAAAGCCCTTGAAACGTCAAAGGCAGATCTGGAGTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR GCA 90 bp CGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACCTGCAAAGTGGGCTTCCACTACCTaGCACCCATCCACTGGGCTT +
Preference number: 4 (lower is better)
Translates to: REARIRIILLLYTTLPAKWASTT*HPSTGL
Trigger: AAGCCCAGTGGATGGGTGGCAGGTAGTGGAAGCCCA...CTTTGCAGGTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR GCA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTAAGCCGACATACGTCTaGACCTGTCTTAGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: CHCAGPLILSNKQMDVVIKPTYV*TCLSLQ
Trigger: CTGGAGACTAAGACAGGTGCAGACGTATGTCGGCTT...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR GCA 90 bp AAAAGCCAGTGTCTTCCAACATGGACAAATACACCTTTCCTTCTGAGCAGAACTTGGAGGCTCTCTCACTaGCCTCTGGATACAGGCATT +
Preference number: 4 (lower is better)
Translates to: KSQCLPTWTNTPFLLSRTWRLSH*PLDTGI
Trigger: AATGCCTGTATCCAGAGGGCAGTGAGAGAGCCTCCA...AGTTCTGCTCAGAAGGAAAGGTGTATTTGTCCATGTTGGAAGACACTGGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR GCA 90 bp TCAGAAAGATGCTCTGGAGGGGTAAGCTCTTCTACGTCAGAAACCTTCCGTAGCCTAGTAAACCTGCCATaGATGCAACATCGTTTACTG +
Preference number: 4 (lower is better)
Translates to: SERCSGGVSSSTSETFRSLVNLP*MQHRLL
Trigger: CAGTAAACGATGTTGCATGCATGGCAGGTTTACTAG...GCTACGGAAGGTTTCTGACGTAGAAGAGCTTACCCCTCCAGAGCATCTTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR GCA 90 bp AAGAAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACAGGCCTTCTTCCGGCTaGTTCCTGAAGCTCCGTGCA +
Preference number: 4 (lower is better)
Translates to: KKFSGGKEKNIGQNLDQHRPSSG*FLKLRA
Trigger: TGCACGGAGCTTCAGGAAGCAGCCGGAAGAAGGCCT...GTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR GCA 90 bp AGACTCTCTGACAAACCAAAATTAAGAGAATTAGTTGCCAGTAGACATGCCTTGGAAAGTACACCCCGGTaGACAGGGGTGTCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: RLSDKPKLRELVASRHALESTPR*TGVSVC
Trigger: GCACACAGACACCCCTGTGCACCGGGGTGTACTTTC...CAAGGCATGTCTACTGGCAACTAATTCTCTTAATTTTGGTTTGTCAGAGAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCATATTGTCTTCACCCTaGGCTTCCACTACCTGCCAC +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPILSSP*ASTTCH
Trigger: GTGGCAGGTAGTGGAAGCCCAGGGTGAAGACAATAT...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
CDS-3UTR CCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCGGAAGGTGTATCCCGTaGAACATGAAGTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPGRCIP*NMKSWM
Trigger: CATCCAGGACTTCATGTTCCACGGGATACACCTTCC...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR CCA 90 bp TCCGAGGAGCAGAGAGCAAGCACTCGCGGTTCTTTGGATGAGTCAGCAGATACTAATAGCATGAAGGTTTaGATCCCTAATAGGAAATGC +
Preference number: 4 (lower is better)
Translates to: SEEQRASTRGSLDESADTNSMKV*IPNRKC
Trigger: GCATTTCCTATTAGGGATCCAAACCTTCATGCTATT...AGTATCTGCTGACTCATCCAAAGAACCGCGAGTGCTTGCTCTCTGCTCCTCGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CCA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTTCAGCTTTGCTATGTTaGTGCAGGCGGTGTGTTCGT +
Preference number: 4 (lower is better)
Translates to: CHCAGPLILSNKQMDVVISALLC*CRRCVR
Trigger: ACGAACACACCGCCTGCACCAACATAGCAAAGCTGA...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR CCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCTCAGCTTTGCTATGTTaGTGCAGGCGGTGTGTTCGT +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPSALLC*CRRCVR
Trigger: ACGAACACACCGCCTGCACCAACATAGCAAAGCTGA...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR CCA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTACTGGGCGTGTGTCATaGATCTGCACCCTACCTTTA +
Preference number: 4 (lower is better)
Translates to: CHCAGPLILSNKQMDVVITGRVS*ICTLPL
Trigger: TAAAGGTAGGGTGCAGATCCATGACACACGCCCAGT...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR CCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCACTGGGCGTGTGTCATaGATCTGCACCCTACCTTTA +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPTGRVS*ICTLPL
Trigger: TAAAGGTAGGGTGCAGATCCATGACACACGCCCAGT...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR CCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCGCACTCGCGGTTCTTTaGATGAGTCAGCAGATACTC +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPALAVL*MSQQIL
Trigger: GAGTATCTGCTGACTCATCCAAAGAACCGCGAGTGC...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR TCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCGTATCCCGTGGAACATaGAGTCCTGGATGCAATCAT +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPVSRGT*SPGCNH
Trigger: ATGATTGCATCCAGGACTTCATGTTCCACGGGATAC...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR TCA 90 bp AAGAAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACCAGACCTCCTCCGGCTaGTTCACAGGCAGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: KKFSGGKEKNIGQNLDQHQTSSG*FTGRKE
Trigger: TTCTTTCCTGCCTGTGAATCAGCCGGAGGAGGTCTG...GTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR TCA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTTCGCGGTTCTTTGGATaGGTCAGCAGATACTCAATG +
Preference number: 4 (lower is better)
Translates to: CHCAGPLILSNKQMDVVISRFFG*VSRYSM
Trigger: CATTGAGTATCTGCTGACTCATCCAAAGAACCGCGA...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR TCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCTCGCGGTTCTTTGGATaGGTCAGCAGATACTCAATG +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPSRFFG*VSRYSM
Trigger: CATTGAGTATCTGCTGACTCATCCAAAGAACCGCGA...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR TCA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTCCTTCACTGTTTGCATaGTTCCAAGACTCCGCTGTA +
Preference number: 4 (lower is better)
Translates to: CHCAGPLILSNKQMDVVIPSLFA*FQDSAV
Trigger: TACAGCGGAGTCTTGGAATCATGCAAACAGTGAAGG...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR TCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCCCTTCACTGTTTGCATaGTTCCAAGACTCCGCTGTA +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPPSLFA*FQDSAV
Trigger: TACAGCGGAGTCTTGGAATCATGCAAACAGTGAAGG...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR TCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCTCTGTGTGCCGAGACTaGACAGCAGTAATGAACTCA +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPSVCRD*TAVMNS
Trigger: TGAGTTCATTACTGCTGTTCAGTCTCGGCACACAGA...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
CDS-3UTR TCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCGTCTTTAGTTTTCTGTaGACAGTGGCTGCAACCTCC +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPVFSFL*TVAATS
Trigger: GGAGGTTGCAGCCACTGTTCACAGAAAACTAAAGAC...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR TCA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTCTGGTCTTGAACTCCTaGCCTCAAGTGATCTATCTG +
Preference number: 4 (lower is better)
Translates to: CHCAGPLILSNKQMDVVILVLNS*PQVIYL
Trigger: CAGATAGATCACTTGAGGTCAGGAGTTCAAGACCAG...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR TCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCCTGGCTCGGCAGAGCTaGGTTGATTCAACAAAAGAA +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPLARQS*VDSTKE
Trigger: TTCTTTTGTTGAATCAACTCAGCTCTGCCGAGCCAG...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR GCA 90 bp CGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACCTGCAAAGTCCCGCACTTTGGAATaGACTGGAGACCTCCTCGGA +
Preference number: 4 (lower is better)
Translates to: REARIRIILLLYTTLPAKSRTLE*TGDLLG
Trigger: TCCGAGGAGGTCTCCAGTGCATTCCAAAGTGCGGGA...CTTTGCAGGTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR GCA 90 bp AAGTGCTTATCTTTTAGAGATACATTCTTAGCAGCCCTCACAGCTTTGATCTTCTCCCGCACTTTGGAATaGACTGGAGACCTCCTCGGA +
Preference number: 4 (lower is better)
Translates to: KCLSFRDTFLAALTALIFSRTLE*TGDLLG
Trigger: TCCGAGGAGGTCTCCAGTGCATTCCAAAGTGCGGGA...GAAGATCAAAGCTGTGAGGGCTGCTAAGAATGTATCTCTAAAAGATAAGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR GCA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTAACGTGAATCAGCTTTaGTATGTTGGTGCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: CHCAGPLILSNKQMDVVINVNQL*YVGAGG
Trigger: ACCGCCTGCACCAACATAGCAAAGCTGATTCACGTT...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR GCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCAACGTGAATCAGCTTTaGTATGTTGGTGCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPNVNQL*YVGAGG
Trigger: ACCGCCTGCACCAACATAGCAAAGCTGATTCACGTT...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR GCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCCGTGTGTCATGGATCTaGACCCTACCTTTAGAAGCT +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPRVSWI*TLPLEA
Trigger: AGCTTCTAAAGGTAGGGTGCAGATCCATGACACACG...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR GCA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTGGAAGATCAGAAAGATaGTCTGGAGGGGTAAGCTCT +
Preference number: 4 (lower is better)
Translates to: CHCAGPLILSNKQMDVVIGRSER*SGGVSS
Trigger: AGAGCTTACCCCTCCAGAGCATCTTTCTGATCTTCC...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR GCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCGGAAGATCAGAAAGATaGTCTGGAGGGGTAAGCTCT +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPGRSER*SGGVSS
Trigger: AGAGCTTACCCCTCCAGAGCATCTTTCTGATCTTCC...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR GCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCATAACCAGGATAATATaGACAGCAGCCGTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPITRII*TAAVRH
Trigger: GTGCCTCACGGCTGCTGTGCATATTATCCTGGTTAT...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR GCA 90 bp AGACTCTCTGACAAACCAAAATTAAGAGAATTAGTTGCCAGTAGACATGCCTTGGGTGTGGCGGCGATGTaGCTGTATACCAGCTACTCA +
Preference number: 4 (lower is better)
Translates to: RLSDKPKLRELVASRHALGVAAM*LYTSYS
Trigger: TGAGTAGCTGGTATACAGGCACATCGCCGCCACACC...CAAGGCATGTCTACTGGCAACTAATTCTCTTAATTTTGGTTTGTCAGAGAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CCA 90 bp TGGATCTGCACCCTACCTTTAGAAGCTGTGTTGCTCTTGGCCTGGGCATGCTCTATGGCACTGTTCAAATaGCATTTATTTTGTAACCCT +
Preference number: 4 (lower is better)
Translates to: WICTLPLEAVLLLAWACSMALFK*HLFCNP
Trigger: AGGGTTACAAAATAAATGCCATTTGAACAGTGCCAT...AGAGCATGCCCAGGCCAAGAGCAACACAGCTTCTAAAGGTAGGGTGCAGATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CCA 90 bp AGACTCTCTGACAAACCAAAATTAAGAGAATTAGTTGCCAGTAGACATGCCTTGGAACCTCCCGCACTTTaGAATGCACTGGAGACCTCC +
Preference number: 4 (lower is better)
Translates to: RLSDKPKLRELVASRHALEPPAL*NALETS
Trigger: GGAGGTCTCCAGTGCATTCCAAAGTGCGGGAGGTTC...CAAGGCATGTCTACTGGCAACTAATTCTCTTAATTTTGGTTTGTCAGAGAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CCA 90 bp AAGAAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACCACCAAGGATCCCTGTaGAACGGACCATCGGGTAAG +
Preference number: 4 (lower is better)
Translates to: KKFSGGKEKNIGQNLDQHHQGSL*NGPSGK
Trigger: CTTACCCGATGGTCCGTTCCACAGGGATCCTTGGTG...GTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CCA 90 bp AGTGACTCCAGATCTGCCTTTGACGTTTCAAGGGCTTTCAAAAGATGGTTAAGTACTGGGCGTGTGTCATaGATCTGCACCCTACCTTTA +
Preference number: 4 (lower is better)
Translates to: SDSRSAFDVSRAFKRWLSTGRVS*ICTLPL
Trigger: TAAAGGTAGGGTGCAGATCCATGACACACGCCCAGT...ACTTAACCATCTTTTGAAAGCCCTTGAAACGTCAAAGGCAGATCTGGAGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CCA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTCAATTCAGGTTTGACTaGGCGTGTGTCATGGATCTG +
Preference number: 4 (lower is better)
Translates to: CHCAGPLILSNKQMDVVIQFRFD*ACVMDL
Trigger: CAGATCCATGACACACGCCCAGTCAAACCTGAATTG...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR CCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCCAATTCAGGTTTGACTaGGCGTGTGTCATGGATCTG +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPQFRFD*ACVMDL
Trigger: CAGATCCATGACACACGCCCAGTCAAACCTGAATTG...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR CCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCGTTTTCTGTGAACAGTaGCTGCAACCTCCCTCACTT +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPVFCEQ*LQPPSL
Trigger: AAGTGAGGGAGGTTGCAGCCACTGTTCACAGAAAAC...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
3UTR CAA 72 bp GCTGGAAGGAGCTGCTCTAACAATGGGTGGCTCAGTTaGTTGTCCAAAATCATTGGCAGACACTTAAAGACA +
Preference number: 4 (lower is better)
Translates to: AGRSCSNNGWLS*LSKIIGRHLKT
Trigger: TGTCTTTAAGTGTCTGCCAATGATTTTGGACAACAAACTGAGCCACCCATTGTTAGAGCAGCTCCTTCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR TCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCTCCTCCTTAGTAACATaGCAAAGGCTGTCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPSSLVT*QRLSFL
Trigger: CAGGAAAGACAGCCTTTGTCATGTTACTAAGGAGGA...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
CDS-3UTR TCA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTCTCCAGTATTTTCCCTaGAGCCTTTTTCCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: CHCAGPLILSNKQMDVVILQYFP*SLFPSS
Trigger: AGAGCTTGGAAAAAGGCTTCAGGGAAAATACTGGAG...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR TCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCCTCCAGTATTTTCCCTaGAGCCTTTTTCCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPLQYFP*SLFPSS
Trigger: AGAGCTTGGAAAAAGGCTTCAGGGAAAATACTGGAG...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR TCA 90 bp CGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACCTGCAAAGGAGCAGAACTTGTGCTaGAGATGGATGCTCAGGCGA +
Preference number: 4 (lower is better)
Translates to: REARIRIILLLYTTLPAKEQNLC*RWMLRR
Trigger: TCGCCTGAGCATCCATCTTCAGCACAAGTTCTGCTC...CTTTGCAGGTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR TCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCATACACCTTTCCTTCTaGGCAGAACTTGTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPIHLSF*AELVLK
Trigger: CTTCAGCACAAGTTCTGCTCAGAAGGAAAGGTGTAT...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR TCA 90 bp AGACTCTCTGACAAACCAAAATTAAGAGAATTAGTTGCCAGTAGACATGCCTTGTATGCACAGCAGCCGTaGGGCACACAATGCCTTCAA +
Preference number: 4 (lower is better)
Translates to: RLSDKPKLRELVASRHALYAQQP*GTQCLQ
Trigger: TTGAAGGCATTGTGTGCCTCACGGCTGCTGTGCATA...CAAGGCATGTCTACTGGCAACTAATTCTCTTAATTTTGGTTTGTCAGAGAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR TCA 90 bp AGACTCTCTGACAAACCAAAATTAAGAGAATTAGTTGCCAGTAGACATGCCTTGGAGGTTGCAGTGAACTaGGATCACACCACTGCGTTC +
Preference number: 4 (lower is better)
Translates to: RLSDKPKLRELVASRHALEVAVN*DHTTAF
Trigger: GAACGCAGTGGTGTGATCTCAGTTCACTGCAACCTC...CAAGGCATGTCTACTGGCAACTAATTCTCTTAATTTTGGTTTGTCAGAGAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR GCA 90 bp TCTGAAATACTTTCTGGACTGTGTCCAACAGCATTGCAACTTCTTCATCTGAATAGAGCTGGAAGGAGCTaGTCTAACAATGGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: SEILSGLCPTALQLLHLNRAGRS*SNNGWL
Trigger: GAGCCACCCATTGTTAGAGCAGCTCCTTCCAGCTCT...ATTCAGATGAAGAAGTTGCAATGCTGTTGGACACAGTCCAGAAAGTATTTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR GCA 90 bp CACTTAAAGACAGAACAACGAACATCAGCTGAGCTCGTGTCAAATGCCAGTTCCAGACGAACCAGAATGTaGTCCATGGGACATATTTTC +
Preference number: 4 (lower is better)
Translates to: HLKTEQRTSAELVSNASSRRTRM*SMGHIF
Trigger: GAAAATATGTCCCATGGAGCACATTCTGGTTCGTCT...GGAACTGGCATTTGACACGAGCTCAGCTGATGTTCGTTGTTCTGTCTTTAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR GCA 90 bp AAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACAAAGCTTTGCTATGTTGGTaGAGGCGGTGTGTTCGTGGG +
Preference number: 4 (lower is better)
Translates to: KFSGGKEKNIGQNLDQHKALLCW*RRCVRG
Trigger: CCCACGAACACACCGCCTGCACCAACATAGCAAAGC...TTTGTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR GCA 90 bp AAGAAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACTGGAGGCTCTCTCACTaGCCTCTGGATACAGGCATT +
Preference number: 4 (lower is better)
Translates to: KKFSGGKEKNIGQNLDQHWRLSH*PLDTGI
Trigger: AATGCCTGTATCCAGAGGGCAGTGAGAGAGCCTCCA...GTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR GCA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTAATCCCTTCACTGTTTaGATGATTCCAAGACTCCGC +
Preference number: 4 (lower is better)
Translates to: CHCAGPLILSNKQMDVVINPFTV*MIPRLR
Trigger: GCGGAGTCTTGGAATCATGCAAACAGTGAAGGGATT...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR GCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCAATCCCTTCACTGTTTaGATGATTCCAAGACTCCGC +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPNPFTV*MIPRLR
Trigger: GCGGAGTCTTGGAATCATGCAAACAGTGAAGGGATT...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR GCA 90 bp AAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACAAACTGGTGGTGTGTGCCTaGAGTCCTAGCCAATTGGGA +
Preference number: 4 (lower is better)
Translates to: KFSGGKEKNIGQNLDQHKLVVCA*SPSQLG
Trigger: TCCCAATTGGCTAGGACTGCAGGCACACACCACCAG...TTTGTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CCA 90 bp AAGAAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACCACTTTGGAATGCACTaGAGACCTCCTCGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: KKFSGGKEKNIGQNLDQHHFGMH*RPPRKV
Trigger: CACCTTCCGAGGAGGTCTCCAGTGCATTCCAAAGTG...GTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CCA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTTTCTCCGAATTGTCGTaGAGACTGTATCTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: CHCAGPLILSNKQMDVVIFSELS*RLYLRA
Trigger: AGCTCTCAGATACAGTCTCCACGACAATTCGGAGAA...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR CCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCTTCTCCGAATTGTCGTaGAGACTGTATCTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPFSELS*RLYLRA
Trigger: AGCTCTCAGATACAGTCTCCACGACAATTCGGAGAA...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR CCA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTTCTCTCACTGCCCTCTaGATACAGGCATTTAAGCAA +
Preference number: 4 (lower is better)
Translates to: CHCAGPLILSNKQMDVVISLTAL*IQAFKQ
Trigger: TTGCTTAAATGCCTGTATCCAGAGGGCAGTGAGAGA...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR CCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCTCTCTCACTGCCCTCTaGATACAGGCATTTAAGCAA +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPSLTAL*IQAFKQ
Trigger: TTGCTTAAATGCCTGTATCCAGAGGGCAGTGAGAGA...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR CCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCATCAGAAAGATGCTCTaGAGGGGTAAGCTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPIRKML*RGKLFY
Trigger: GTAGAAGAGCTTACCCCTCCAGAGCATCTTTCTGAT...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR TCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCTCTCACGTTTTTCCATaGCAGATGGCACTGTTCAAA +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPSHVFP*QMALFK
Trigger: TTTGAACAGTGCCATCTGTCATGGAAAAACGTGAGA...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
CDS-3UTR TCA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTGTAATTCATTTAGGCTaGAAGGATCAGAGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: CHCAGPLILSNKQMDVVIVIHLG*KDQRPL
Trigger: AAGAGGCCTCTGATCCTTTCAGCCTAAATGAATTAC...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR TCA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTAAGCAATATAAAGCTTaGTGGATACGCCAAAGCCGA +
Preference number: 4 (lower is better)
Translates to: CHCAGPLILSNKQMDVVIKQYKA*WIRQSR
Trigger: TCGGCTTTGGCGTATCCATCAAGCTTTATATTGCTT...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR TCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCAAGCAATATAAAGCTTaGTGGATACGCCAAAGCCGA +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPKQYKA*WIRQSR
Trigger: TCGGCTTTGGCGTATCCATCAAGCTTTATATTGCTT...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
CDS-3UTR TCA 90 bp CACTTAAAGACAGAACAACGAACATCAGCTGAGCTCGTGTCAAATGCCAGTTCCCAACAATGCAGCATTTaGTCGAACTTCAGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: HLKTEQRTSAELVSNASSQQCSI*SNFRVS
Trigger: AGAAACTCTGAAGTTCGATCAAATGCTGCATTGTTG...GGAACTGGCATTTGACACGAGCTCAGCTGATGTTCGTTGTTCTGTCTTTAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR TCA 90 bp CGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACCTGCAAAGCAGCCCTCACAGCTTTaGTCTTCAACAGCATGTCCA +
Preference number: 4 (lower is better)
Translates to: REARIRIILLLYTTLPAKQPSQL*SSTACP
Trigger: TGGACATGCTGTTGAAGATCAAAGCTGTGAGGGCTG...CTTTGCAGGTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR TCA 90 bp AGACTCTCTGACAAACCAAAATTAAGAGAATTAGTTGCCAGTAGACATGCCTTGATGCCAATTCAGGTTTaGCTGGGCGTGTGTCATGGA +
Preference number: 4 (lower is better)
Translates to: RLSDKPKLRELVASRHALMPIQV*LGVCHG
Trigger: TCCATGACACACGCCCAGTCAAACCTGAATTGGCAT...CAAGGCATGTCTACTGGCAACTAATTCTCTTAATTTTGGTTTGTCAGAGAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR TCA 90 bp AAGTGCTTATCTTTTAGAGATACATTCTTAGCAGCCCTCACAGCTTTGATCTTCATGCCAATTCAGGTTTaGCTGGGCGTGTGTCATGGA +
Preference number: 4 (lower is better)
Translates to: KCLSFRDTFLAALTALIFMPIQV*LGVCHG
Trigger: TCCATGACACACGCCCAGTCAAACCTGAATTGGCAT...GAAGATCAAAGCTGTGAGGGCTGCTAAGAATGTATCTCTAAAAGATAAGCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR TCA 90 bp ACAAGGAACGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACCTTCCGGCTGCTTCCTaGAGCTCCGTGCAATACATT +
Preference number: 4 (lower is better)
Translates to: TRNERQGLGLFCYYIPPYLPAAS*SSVQYI
Trigger: AATGTATTGCACGGAGCTTCAGGAAGCAGCCGGAAG...GTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCGTTCCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR TCA 90 bp ACAAGGAACGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACACCTTCCGTAGCTGGTaGCTTATCTCAACCACAGGC +
Preference number: 4 (lower is better)
Translates to: TRNERQGLGLFCYYIPPYTFRSW*LISTTG
Trigger: GCCTGTGGTTGAGATAAGTCACCAGCTACGGAAGGT...GTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCGTTCCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR TCA 90 bp GACATTAGCATGAATAAAGGGATCTTGCAGCGATCATCCTTAAATACTTTCAGATATGCACAGCAGCCGTaGGGCACACAATGCCTTCAA +
Preference number: 4 (lower is better)
Translates to: DISMNKGILQRSSLNTFRYAQQP*GTQCLQ
Trigger: TTGAAGGCATTGTGTGCCTCACGGCTGCTGTGCATA...TCTGAAAGTATTTAAGGATGATCGCTGCAAGATCCCTTTATTCATGCTAATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR TCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCAACCTCCCTCACTTTTaGGCTTTTATGTTTACCTGC +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPNLPHF*AFMFTC
Trigger: GCAGGTAAACATAAAAGCTCAAAAGTGAGGGAGGTT...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR TCA 90 bp AGACTCTCTGACAAACCAAAATTAAGAGAATTAGTTGCCAGTAGACATGCCTTGCCACTAATACAAAAATaGGCTGGGTGTGGCGGCGAT +
Preference number: 4 (lower is better)
Translates to: RLSDKPKLRELVASRHALPLIQK*AGCGGD
Trigger: ATCGCCGCCACACCCAGCTCATTTTTGTATTAGTGG...CAAGGCATGTCTACTGGCAACTAATTCTCTTAATTTTGGTTTGTCAGAGAGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR GCA 90 bp AAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACAAAAGAGCTGGAAGGAGCTaGTCTAACAATGGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: KFSGGKEKNIGQNLDQHKRAGRS*SNNGWL
Trigger: GAGCCACCCATTGTTAGAGCAGCTCCTTCCAGCTCT...TTTGTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR GCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCAGACGAACCAGAATGTaGTCCATGGGACATATTTTC +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPRRTRM*SMGHIF
Trigger: GAAAATATGTCCCATGGAGCACATTCTGGTTCGTCT...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR GCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCCTAGTAAACCTGCCATaGATGCAACATCGTTTACTG +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPLVNLP*MQHRLL
Trigger: CAGTAAACGATGTTGCATGCATGGCAGGTTTACTAG...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR GCA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTCTCAATGTAGACCAATaGCAATTCAGGTTTGACTGG +
Preference number: 4 (lower is better)
Translates to: CHCAGPLILSNKQMDVVILNVDQ*QFRFDW
Trigger: CCAGTCAAACCTGAATTGGCATTGGTCTACATTGAG...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR GCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCCTCAATGTAGACCAATaGCAATTCAGGTTTGACTGG +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPLNVDQ*QFRFDW
Trigger: CCAGTCAAACCTGAATTGGCATTGGTCTACATTGAG...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR GCA 90 bp AAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACAAATTCCCACCCGGTGTCTaGAGAAGTGACTCCAGATCT +
Preference number: 4 (lower is better)
Translates to: KFSGGKEKNIGQNLDQHKFPPGV*RSDSRS
Trigger: AGATCTGGAGTCACTTCTGCAGACACCGGGTGGGAA...TTTGTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR GCA 90 bp ACAAGGAACGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACTGTGCTGAAGATGGATaGTCAGGCGACAGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: TRNERQGLGLFCYYIPPYCAEDG*SGDSGD
Trigger: GTCTCCACTGTCGCCTGAGCATCCATCTTCAGCACA...GTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCGTTCCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCTGTAATCCCTGTAACTaGTTTTTAATGGTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPCNPCN*FLMVPW
Trigger: CCACGGGACCATTAAAAACCAGTTACAGGGATTACA...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR CCA 90 bp AGACTCTCTGACAAACCAAAATTAAGAGAATTAGTTGCCAGTAGACATGCCTTGGGAAGGTGTATCCCGTaGAACATGAAGTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: RLSDKPKLRELVASRHALGRCIP*NMKSWM
Trigger: CATCCAGGACTTCATGTTCCACGGGATACACCTTCC...CAAGGCATGTCTACTGGCAACTAATTCTCTTAATTTTGGTTTGTCAGAGAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CCA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTTGCTCTAACAATGGGTaGCTCAGTTTGTTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: CHCAGPLILSNKQMDVVICSNNG*LSLLSK
Trigger: TTTGGACAACAAACTGAGCCACCCATTGTTAGAGCA...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR CCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCTGCTCTAACAATGGGTaGCTCAGTTTGTTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPCSNNG*LSLLSK
Trigger: TTTGGACAACAAACTGAGCCACCCATTGTTAGAGCA...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR CCA 90 bp CGTTTCAAGGGCTTTCAAAAGATGGTTAAGTTTCTTCCGAGGAGCAGAGAGCAATGCTCTAACAATGGGTaGCTCAGTTTGTTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: RFKGFQKMVKFLPRSREQCSNNG*LSLLSK
Trigger: TTTGGACAACAAACTGAGCCACCCATTGTTAGAGCA...TTGCTCTCTGCTCCTCGGAAGAAACTTAACCATCTTTTGAAAGCCCTTGAAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CCA 90 bp AAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACAAAACTGATAGAACCTCCTaGCAGCGGCGTGGTTCATCT +
Preference number: 4 (lower is better)
Translates to: KFSGGKEKNIGQNLDQHKTDRTS*QRRGSS
Trigger: AGATGAACCACGCCGCTGCCAGGAGGTTCTATCAGT...TTTGTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CCA 90 bp TCTGAAATACTTTCTGGACTGTGTCCAACAGCATTGCAACTTCTTCATCTGAATTCAGCTTTGCTATGTTaGTGCAGGCGGTGTGTTCGT +
Preference number: 4 (lower is better)
Translates to: SEILSGLCPTALQLLHLNSALLC*CRRCVR
Trigger: ACGAACACACCGCCTGCACCAACATAGCAAAGCTGA...ATTCAGATGAAGAAGTTGCAATGCTGTTGGACACAGTCCAGAAAGTATTTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CCA 90 bp CGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACCTGCAAAGACTGGGCGTGTGTCATaGATCTGCACCCTACCTTTA +
Preference number: 4 (lower is better)
Translates to: REARIRIILLLYTTLPAKTGRVS*ICTLPL
Trigger: TAAAGGTAGGGTGCAGATCCATGACACACGCCCAGT...CTTTGCAGGTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CCA 90 bp AGACTCTCTGACAAACCAAAATTAAGAGAATTAGTTGCCAGTAGACATGCCTTGGCACTCGCGGTTCTTTaGATGAGTCAGCAGATACTC +
Preference number: 4 (lower is better)
Translates to: RLSDKPKLRELVASRHALALAVL*MSQQIL
Trigger: GAGTATCTGCTGACTCATCCAAAGAACCGCGAGTGC...CAAGGCATGTCTACTGGCAACTAATTCTCTTAATTTTGGTTTGTCAGAGAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CCA 90 bp AGTGACTCCAGATCTGCCTTTGACGTTTCAAGGGCTTTCAAAAGATGGTTAAGTATCAGAAAGATGCTCTaGAGGGGTAAGCTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: SDSRSAFDVSRAFKRWLSIRKML*RGKLFY
Trigger: GTAGAAGAGCTTACCCCTCCAGAGCATCTTTCTGAT...ACTTAACCATCTTTTGAAAGCCCTTGAAACGTCAAAGGCAGATCTGGAGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CCA 90 bp AAGAAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACAAAATGAGCTGGGTGTaGCGGCGATGTGCCTGTATA +
Preference number: 4 (lower is better)
Translates to: KKFSGGKEKNIGQNLDQHKMSWV*RRCACI
Trigger: TATACAGGCACATCGCCGCCACACCCAGCTCATTTT...GTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CCA 90 bp AGACTCTCTGACAAACCAAAATTAAGAGAATTAGTTGCCAGTAGACATGCCTTGAATACAAAAATGAGCTaGGTGTGGCGGCGATGTGCC +
Preference number: 4 (lower is better)
Translates to: RLSDKPKLRELVASRHALNTKMS*VWRRCA
Trigger: GGCACATCGCCGCCACACCCAGCTCATTTTTGTATT...CAAGGCATGTCTACTGGCAACTAATTCTCTTAATTTTGGTTTGTCAGAGAGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409339.3
3UTR CAA 72 bp TCTTTTAGAGATACATTCTTAGCAGCCCTCACAGCTTaGATCTTCAACAGCATGTCCACAAAAGCTACCCTC +
Preference number: 4 (lower is better)
Translates to: SFRDTFLAALTA*IFNSMSTKATL
Trigger: GAGGGTAGCTTTTGTGGACATGCTGTTGAAGATCAAAGCTGTGAGGGCTGCTAAGAATGTATCTCTAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR TCA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTCAACAATGCAGCATTTaGTCGAACTTCAGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: CHCAGPLILSNKQMDVVIQQCSI*SNFRVS
Trigger: AGAAACTCTGAAGTTCGATCAAATGCTGCATTGTTG...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR TCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCCAACAATGCAGCATTTaGTCGAACTTCAGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPQQCSI*SNFRVS
Trigger: AGAAACTCTGAAGTTCGATCAAATGCTGCATTGTTG...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR TCA 90 bp ACAAGGAACGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACACAACGAACATCAGCTaGGCTCGTGTCAAATGCCAG +
Preference number: 4 (lower is better)
Translates to: TRNERQGLGLFCYYIPPYTTNIS*ARVKCQ
Trigger: CTGGCATTTGACACGAGCTCAGCTGATGTTCGTTGT...GTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCGTTCCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR TCA 90 bp AAGAAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACTCGCGGTTCTTTGGATaGGTCAGCAGATACTCAATG +
Preference number: 4 (lower is better)
Translates to: KKFSGGKEKNIGQNLDQHSRFFG*VSRYSM
Trigger: CATTGAGTATCTGCTGACTCATCCAAAGAACCGCGA...GTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR TCA 90 bp CGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACCTGCAAAGCCTTCACTGTTTGCATaGTTCCAAGACTCCGCTGTA +
Preference number: 4 (lower is better)
Translates to: REARIRIILLLYTTLPAKPSLFA*FQDSAV
Trigger: TACAGCGGAGTCTTGGAATCATGCAAACAGTGAAGG...CTTTGCAGGTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR TCA 90 bp AAGTGCTTATCTTTTAGAGATACATTCTTAGCAGCCCTCACAGCTTTGATCTTCCCTTCACTGTTTGCATaGTTCCAAGACTCCGCTGTA +
Preference number: 4 (lower is better)
Translates to: KCLSFRDTFLAALTALIFPSLFA*FQDSAV
Trigger: TACAGCGGAGTCTTGGAATCATGCAAACAGTGAAGG...GAAGATCAAAGCTGTGAGGGCTGCTAAGAATGTATCTCTAAAAGATAAGCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR TCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCCATCCAAAAATGACCTaGCCACATTCGAAGACTTTA +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPHPKMT*PHSKTL
Trigger: TAAAGTCTTCGAATGTGGTCAGGTCATTTTTGGATG...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR TCA 90 bp AGACTCTCTGACAAACCAAAATTAAGAGAATTAGTTGCCAGTAGACATGCCTTGGTCTTTAGTTTTCTGTaGACAGTGGCTGCAACCTCC +
Preference number: 4 (lower is better)
Translates to: RLSDKPKLRELVASRHALVFSFL*TVAATS
Trigger: GGAGGTTGCAGCCACTGTTCACAGAAAACTAAAGAC...CAAGGCATGTCTACTGGCAACTAATTCTCTTAATTTTGGTTTGTCAGAGAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR TCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCATGTTGGCTTGGTTATaGATTCAAAAGTTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPMLAWL*IQKFSQ
Trigger: CTGGGAGAACTTTTGAATTCATAACCAAGCCAACAT...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR TCA 90 bp AGTGACTCCAGATCTGCCTTTGACGTTTCAAGGGCTTTCAAAAGATGGTTAAGTTCGGCAGAGCTGAGTTaGTTCAACAAAAGAACAATC +
Preference number: 4 (lower is better)
Translates to: SDSRSAFDVSRAFKRWLSSAELS*FNKRTI
Trigger: GATTGTTCTTTTGTTGAATCAACTCAGCTCTGCCGA...ACTTAACCATCTTTTGAAAGCCCTTGAAACGTCAAAGGCAGATCTGGAGTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR GCA 90 bp ACAAGGAACGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACAAGCCGACATACGTCTaGACCTGTCTTAGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: TRNERQGLGLFCYYIPPYKPTYV*TCLSLQ
Trigger: CTGGAGACTAAGACAGGTGCAGACGTATGTCGGCTT...GTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCGTTCCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR GCA 90 bp AAGAAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACCGTGTGTCATGGATCTaGACCCTACCTTTAGAAGCT +
Preference number: 4 (lower is better)
Translates to: KKFSGGKEKNIGQNLDQHRVSWI*TLPLEA
Trigger: AGCTTCTAAAGGTAGGGTGCAGATCCATGACACACG...GTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR GCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCCTTCCTGAAGCTCCGTaGAATACATTCCAACATTTT +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPLPEAP*NTFQHF
Trigger: AAAATGTTGGAATGTATTGCACGGAGCTTCAGGAAG...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR GCA 90 bp AAGAAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACGGAAGATCAGAAAGATaGTCTGGAGGGGTAAGCTCT +
Preference number: 4 (lower is better)
Translates to: KKFSGGKEKNIGQNLDQHGRSER*SGGVSS
Trigger: AGAGCTTACCCCTCCAGAGCATCTTTCTGATCTTCC...GTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR GCA 90 bp AAGAAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACATAACCAGGATAATATaGACAGCAGCCGTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: KKFSGGKEKNIGQNLDQHITRII*TAAVRH
Trigger: GTGCCTCACGGCTGCTGTGCATATTATCCTGGTTAT...GTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CCA 90 bp AAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACAAAATATTGTCTTCACCCTaGGCTTCCACTACCTGCCAC +
Preference number: 4 (lower is better)
Translates to: KFSGGKEKNIGQNLDQHKILSSP*ASTTCH
Trigger: GTGGCAGGTAGTGGAAGCCCAGGGTGAAGACAATAT...TTTGTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCGAACTTCAGAGTTTCTaGCCTTTAATCCTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPELQSF*PLILSK
Trigger: TTTGGAGAGGATTAAAGGCCAGAAACTCTGAAGTTC...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR CCA 90 bp AAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACAAATCAGCTTTGCTATGTTaGTGCAGGCGGTGTGTTCGT +
Preference number: 4 (lower is better)
Translates to: KFSGGKEKNIGQNLDQHKSALLC*CRRCVR
Trigger: ACGAACACACCGCCTGCACCAACATAGCAAAGCTGA...TTTGTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CCA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTTACTTTCAGATACTCTaGAAGCACAGAGGCAAACTT +
Preference number: 4 (lower is better)
Translates to: CHCAGPLILSNKQMDVVIYFQIL*KHRGKL
Trigger: AAGTTTGCCTCTGTGCTTCCAGAGTATCTGAAAGTA...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR CCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCTACTTTCAGATACTCTaGAAGCACAGAGGCAAACTT +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPYFQIL*KHRGKL
Trigger: AAGTTTGCCTCTGTGCTTCCAGAGTATCTGAAAGTA...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR CCA 90 bp GACATTAGCATGAATAAAGGGATCTTGCAGCGATCATCCTTAAATACTTTCAGAGCACTCGCGGTTCTTTaGATGAGTCAGCAGATACTC +
Preference number: 4 (lower is better)
Translates to: DISMNKGILQRSSLNTFRALAVL*MSQQIL
Trigger: GAGTATCTGCTGACTCATCCAAAGAACCGCGAGTGC...TCTGAAAGTATTTAAGGATGATCGCTGCAAGATCCCTTTATTCATGCTAATGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CCA 90 bp AAGAAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACGTTTTCTGTGAACAGTaGCTGCAACCTCCCTCACTT +
Preference number: 4 (lower is better)
Translates to: KKFSGGKEKNIGQNLDQHVFCEQ*LQPPSL
Trigger: AAGTGAGGGAGGTTGCAGCCACTGTTCACAGAAAAC...GTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR TCA 90 bp AAGAAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACTCCTCCTTAGTAACATaGCAAAGGCTGTCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: KKFSGGKEKNIGQNLDQHSSLVT*QRLSFL
Trigger: CAGGAAAGACAGCCTTTGTCATGTTACTAAGGAGGA...GTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR TCA 90 bp AGACTCTCTGACAAACCAAAATTAAGAGAATTAGTTGCCAGTAGACATGCCTTGCTCCAGTATTTTCCCTaGAGCCTTTTTCCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: RLSDKPKLRELVASRHALLQYFP*SLFPSS
Trigger: AGAGCTTGGAAAAAGGCTTCAGGGAAAATACTGGAG...CAAGGCATGTCTACTGGCAACTAATTCTCTTAATTTTGGTTTGTCAGAGAGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR TCA 90 bp AAGTGCTTATCTTTTAGAGATACATTCTTAGCAGCCCTCACAGCTTTGATCTTCCTCCAGTATTTTCCCTaGAGCCTTTTTCCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: KCLSFRDTFLAALTALIFLQYFP*SLFPSS
Trigger: AGAGCTTGGAAAAAGGCTTCAGGGAAAATACTGGAG...GAAGATCAAAGCTGTGAGGGCTGCTAAGAATGTATCTCTAAAAGATAAGCACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR TCA 90 bp AAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACAAAGTATCCCGTGGAACATaGAGTCCTGGATGCAATCAT +
Preference number: 4 (lower is better)
Translates to: KFSGGKEKNIGQNLDQHKVSRGT*SPGCNH
Trigger: ATGATTGCATCCAGGACTTCATGTTCCACGGGATAC...TTTGTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR TCA 90 bp TCTGAAATACTTTCTGGACTGTGTCCAACAGCATTGCAACTTCTTCATCTGAATATACACCTTTCCTTCTaGGCAGAACTTGTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: SEILSGLCPTALQLLHLNIHLSF*AELVLK
Trigger: CTTCAGCACAAGTTCTGCTCAGAAGGAAAGGTGTAT...ATTCAGATGAAGAAGTTGCAATGCTGTTGGACACAGTCCAGAAAGTATTTCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR TCA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTTCTGAATCTGTTTTCTaGATCAAGGAACTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: CHCAGPLILSNKQMDVVISESVF*IKELPV
Trigger: AACTGGAAGTTCCTTGATTCAGAAAACAGATTCAGA...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR TCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCTCTGAATCTGTTTTCTaGATCAAGGAACTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPSESVF*IKELPV
Trigger: AACTGGAAGTTCCTTGATTCAGAAAACAGATTCAGA...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR TCA 90 bp AAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACAAATCTGTGTGCCGAGACTaGACAGCAGTAATGAACTCA +
Preference number: 4 (lower is better)
Translates to: KFSGGKEKNIGQNLDQHKSVCRD*TAVMNS
Trigger: TGAGTTCATTACTGCTGTTCAGTCTCGGCACACAGA...TTTGTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR GCA 90 bp AAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACAAAAACGTGAATCAGCTTTaGTATGTTGGTGCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: KFSGGKEKNIGQNLDQHKNVNQL*YVGAGG
Trigger: ACCGCCTGCACCAACATAGCAAAGCTGATTCACGTT...TTTGTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR GCA 90 bp CGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACCTGCAAAGAATCCCTTCACTGTTTaGATGATTCCAAGACTCCGC +
Preference number: 4 (lower is better)
Translates to: REARIRIILLLYTTLPAKNPFTV*MIPRLR
Trigger: GCGGAGTCTTGGAATCATGCAAACAGTGAAGGGATT...CTTTGCAGGTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR GCA 90 bp ACAAGGAACGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACTTAGGAGGCAGAGGTTaGAGTGAACTGAGATCACAC +
Preference number: 4 (lower is better)
Translates to: TRNERQGLGLFCYYIPPYLGGRG*SELRSH
Trigger: GTGTGATCTCAGTTCACTGCAACCTCTGCCTCCTAA...GTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCGTTCCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCTGGAACATGAAGTCCTaGATGCAATCATTTTCAATC +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPWNMKS*MQSFSI
Trigger: GATTGAAAATGATTGCATCCAGGACTTCATGTTCCA...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR CCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCAATAGCATGAAGGTTTaGATCCCTAATAGGAAATGC +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPNSMKV*IPNRKC
Trigger: GCATTTCCTATTAGGGATCCAAACCTTCATGCTATT...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR CCA 90 bp AAGAAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACTTCTCCGAATTGTCGTaGAGACTGTATCTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: KKFSGGKEKNIGQNLDQHFSELS*RLYLRA
Trigger: AGCTCTCAGATACAGTCTCCACGACAATTCGGAGAA...GTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CCA 90 bp AAGAAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACTCTCTCACTGCCCTCTaGATACAGGCATTTAAGCAA +
Preference number: 4 (lower is better)
Translates to: KKFSGGKEKNIGQNLDQHSLTAL*IQAFKQ
Trigger: TTGCTTAAATGCCTGTATCCAGAGGGCAGTGAGAGA...GTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CCA 90 bp ACAAGGAACGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACCAATTCAGGTTTGACTaGGCGTGTGTCATGGATCTG +
Preference number: 4 (lower is better)
Translates to: TRNERQGLGLFCYYIPPYQFRFD*ACVMDL
Trigger: CAGATCCATGACACACGCCCAGTCAAACCTGAATTG...GTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCGTTCCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CCA 90 bp AGTGACTCCAGATCTGCCTTTGACGTTTCAAGGGCTTTCAAAAGATGGTTAAGTCAGTGTCTTCCAACATaGACAAATACACCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: SDSRSAFDVSRAFKRWLSQCLPT*TNTPFL
Trigger: AAGGAAAGGTGTATTTGTCCATGTTGGAAGACACTG...ACTTAACCATCTTTTGAAAGCCCTTGAAACGTCAAAGGCAGATCTGGAGTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CCA 90 bp AGACTCTCTGACAAACCAAAATTAAGAGAATTAGTTGCCAGTAGACATGCCTTGATCAGAAAGATGCTCTaGAGGGGTAAGCTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: RLSDKPKLRELVASRHALIRKML*RGKLFY
Trigger: GTAGAAGAGCTTACCCCTCCAGAGCATCTTTCTGAT...CAAGGCATGTCTACTGGCAACTAATTCTCTTAATTTTGGTTTGTCAGAGAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CCA 90 bp AAGAAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACAGAAATTACATTAGCTaGGTCTGGTGGTGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: KKFSGGKEKNIGQNLDQHRNYIS*VWWCVP
Trigger: AGGCACACACCACCAGACCCAGCTAATGTAATTTCT...GTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR TCA 90 bp AAGAAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACTCTCACGTTTTTCCATaGCAGATGGCACTGTTCAAA +
Preference number: 4 (lower is better)
Translates to: KKFSGGKEKNIGQNLDQHSHVFP*QMALFK
Trigger: TTTGAACAGTGCCATCTGTCATGGAAAAACGTGAGA...GTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR TCA 90 bp AAGTGCTTATCTTTTAGAGATACATTCTTAGCAGCCCTCACAGCTTTGATCTTCTCTCACGTTTTTCCATaGCAGATGGCACTGTTCAAA +
Preference number: 4 (lower is better)
Translates to: KCLSFRDTFLAALTALIFSHVFP*QMALFK
Trigger: TTTGAACAGTGCCATCTGTCATGGAAAAACGTGAGA...GAAGATCAAAGCTGTGAGGGCTGCTAAGAATGTATCTCTAAAAGATAAGCACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR TCA 90 bp AAGAAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACAAGCAATATAAAGCTTaGTGGATACGCCAAAGCCGA +
Preference number: 4 (lower is better)
Translates to: KKFSGGKEKNIGQNLDQHKQYKA*WIRQSR
Trigger: TCGGCTTTGGCGTATCCATCAAGCTTTATATTGCTT...GTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR TCA 90 bp AAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACAAAATACACCTTTCCTTCTaGGCAGAACTTGTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: KFSGGKEKNIGQNLDQHKIHLSF*AELVLK
Trigger: CTTCAGCACAAGTTCTGCTCAGAAGGAAAGGTGTAT...TTTGTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR TCA 90 bp GCCTCACAAAGCTTCTCCTATCCATGTGCTAGTTATCTGGATAATTTGCTGATAATGTTGGCTTGGTTATaGATTCAAAAGTTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: ASQSFSYPCASYLDNLLIMLAWL*IQKFSQ
Trigger: CTGGGAGAACTTTTGAATTCATAACCAAGCCAACAT...TATCAGCAAATTATCCAGATAACTAGCACATGGATAGGAGAAGCTTTGTGAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR GCA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTATCCCTAATAGGAAATaGTTCAACAAACAACAATGC +
Preference number: 4 (lower is better)
Translates to: CHCAGPLILSNKQMDVVIIPNRK*FNKQQC
Trigger: GCATTGTTGTTTGTTGAAGCATTTCCTATTAGGGAT...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR GCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCATCCCTAATAGGAAATaGTTCAACAAACAACAATGC +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPIPNRK*FNKQQC
Trigger: GCATTGTTGTTTGTTGAAGCATTTCCTATTAGGGAT...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR GCA 90 bp AGACTCTCTGACAAACCAAAATTAAGAGAATTAGTTGCCAGTAGACATGCCTTGAGACGAACCAGAATGTaGTCCATGGGACATATTTTC +
Preference number: 4 (lower is better)
Translates to: RLSDKPKLRELVASRHALRRTRM*SMGHIF
Trigger: GAAAATATGTCCCATGGAGCACATTCTGGTTCGTCT...CAAGGCATGTCTACTGGCAACTAATTCTCTTAATTTTGGTTTGTCAGAGAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR GCA 90 bp CGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACCTGCAAAGCTCAATGTAGACCAATaGCAATTCAGGTTTGACTGG +
Preference number: 4 (lower is better)
Translates to: REARIRIILLLYTTLPAKLNVDQ*QFRFDW
Trigger: CCAGTCAAACCTGAATTGGCATTGGTCTACATTGAG...CTTTGCAGGTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR GCA 90 bp TCTGAAATACTTTCTGGACTGTGTCCAACAGCATTGCAACTTCTTCATCTGAATCTCAATGTAGACCAATaGCAATTCAGGTTTGACTGG +
Preference number: 4 (lower is better)
Translates to: SEILSGLCPTALQLLHLNLNVDQ*QFRFDW
Trigger: CCAGTCAAACCTGAATTGGCATTGGTCTACATTGAG...ATTCAGATGAAGAAGTTGCAATGCTGTTGGACACAGTCCAGAAAGTATTTCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CCA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTATGGCACTGTTCAAATaGCATTTATTTTGTAACCCT +
Preference number: 4 (lower is better)
Translates to: CHCAGPLILSNKQMDVVIMALFK*HLFCNP
Trigger: AGGGTTACAAAATAAATGCCATTTGAACAGTGCCAT...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR CCA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTTTTTTAATGGTCCCGTaGATCATTTTGATGAAGTTG +
Preference number: 4 (lower is better)
Translates to: CHCAGPLILSNKQMDVVIFLMVP*IILMKL
Trigger: CAACTTCATCAAAATGATCCACGGGACCATTAAAAA...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
40% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR CCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCTTTTTAATGGTCCCGTaGATCATTTTGATGAAGTTG +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPFLMVP*IILMKL
Trigger: CAACTTCATCAAAATGATCCACGGGACCATTAAAAA...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR CCA 90 bp AGACTCTCTGACAAACCAAAATTAAGAGAATTAGTTGCCAGTAGACATGCCTTGTGTAATCCCTGTAACTaGTTTTTAATGGTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: RLSDKPKLRELVASRHALCNPCN*FLMVPW
Trigger: CCACGGGACCATTAAAAACCAGTTACAGGGATTACA...CAAGGCATGTCTACTGGCAACTAATTCTCTTAATTTTGGTTTGTCAGAGAGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CCA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCATGGCACTGTTCAAATaGCATTTATTTTGTAACCCA +
Preference number: 4 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPMALFK*HLFCNP
Trigger: TGGGTTACAAAATAAATGCCATTTGAACAGTGCCAT...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000409423.5
CDS-3UTR TCA 90 bp AAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACAAAGTAATTCATTTAGGCTaGAAGGATCAGAGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: KFSGGKEKNIGQNLDQHKVIHLG*KDQRPL
Trigger: AAGAGGCCTCTGATCCTTTCAGCCTAAATGAATTAC...TTTGTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR TCA 90 bp AAGAAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACCAACAATGCAGCATTTaGTCGAACTTCAGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: KKFSGGKEKNIGQNLDQHQQCSI*SNFRVS
Trigger: AGAAACTCTGAAGTTCGATCAAATGCTGCATTGTTG...GTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR TCA 90 bp ACAAGGAACGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACAACCTCCCTCACTTTTaGGCTTTTATGTTTACCTGC +
Preference number: 4 (lower is better)
Translates to: TRNERQGLGLFCYYIPPYNLPHF*AFMFTC
Trigger: GCAGGTAAACATAAAAGCTCAAAAGTGAGGGAGGTT...GTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCGTTCCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR GCA 90 bp ACAAGGAACGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACCTAGTAAACCTGCCATaGATGCAACATCGTTTACTG +
Preference number: 4 (lower is better)
Translates to: TRNERQGLGLFCYYIPPYLVNLP*MQHRLL
Trigger: CAGTAAACGATGTTGCATGCATGGCAGGTTTACTAG...GTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCGTTCCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR GCA 90 bp TCTGAAATACTTTCTGGACTGTGTCCAACAGCATTGCAACTTCTTCATCTGAATCTTCCTGAAGCTCCGTaGAATACATTCCAACATTTT +
Preference number: 4 (lower is better)
Translates to: SEILSGLCPTALQLLHLNLPEAP*NTFQHF
Trigger: AAAATGTTGGAATGTATTGCACGGAGCTTCAGGAAG...ATTCAGATGAAGAAGTTGCAATGCTGTTGGACACAGTCCAGAAAGTATTTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CCA 90 bp AAGAAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACGAACTTCAGAGTTTCTaGCCTTTAATCCTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: KKFSGGKEKNIGQNLDQHELQSF*PLILSK
Trigger: TTTGGAGAGGATTAAAGGCCAGAAACTCTGAAGTTC...GTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CCA 90 bp ACAAGGAACGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACTGCTCTAACAATGGGTaGCTCAGTTTGTTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: TRNERQGLGLFCYYIPPYCSNNG*LSLLSK
Trigger: TTTGGACAACAAACTGAGCCACCCATTGTTAGAGCA...GTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCGTTCCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CCA 90 bp CGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACCTGCAAAGTACTTTCAGATACTCTaGAAGCACAGAGGCAAACTT +
Preference number: 4 (lower is better)
Translates to: REARIRIILLLYTTLPAKYFQIL*KHRGKL
Trigger: AAGTTTGCCTCTGTGCTTCCAGAGTATCTGAAAGTA...CTTTGCAGGTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CCA 90 bp AAGAAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACCAGTGTCTTCCAACATaGACAAATACACCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: KKFSGGKEKNIGQNLDQHQCLPT*TNTPFL
Trigger: AAGGAAAGGTGTATTTGTCCATGTTGGAAGACACTG...GTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR TCA 90 bp AAGAAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACTCTGAATCTGTTTTCTaGATCAAGGAACTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: KKFSGGKEKNIGQNLDQHSESVF*IKELPV
Trigger: AACTGGAAGTTCCTTGATTCAGAAAACAGATTCAGA...GTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR TCA 90 bp ACAAGGAACGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACCATCCAAAAATGACCTaGCCACATTCGAAGACTTTA +
Preference number: 4 (lower is better)
Translates to: TRNERQGLGLFCYYIPPYHPKMT*PHSKTL
Trigger: TAAAGTCTTCGAATGTGGTCAGGTCATTTTTGGATG...GTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCGTTCCTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR TCA 90 bp ACAAGGAACGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACAATATCCAAGACCTGTaGGACAACTGTAAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: TRNERQGLGLFCYYIPPYNIQDL*DNCKRC
Trigger: ACACCTTTTACAGTTGTCTCACAGGTCTTGGATATT...GTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCGTTCCTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR GCA 90 bp AAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACAAACTTCCTGAAGCTCCGTaGAATACATTCCAACATTTT +
Preference number: 4 (lower is better)
Translates to: KFSGGKEKNIGQNLDQHKLPEAP*NTFQHF
Trigger: AAAATGTTGGAATGTATTGCACGGAGCTTCAGGAAG...TTTGTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CCA 90 bp AAGAAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACTGGAACATGAAGTCCTaGATGCAATCATTTTCAATC +
Preference number: 4 (lower is better)
Translates to: KKFSGGKEKNIGQNLDQHWNMKS*MQSFSI
Trigger: GATTGAAAATGATTGCATCCAGGACTTCATGTTCCA...GTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CCA 90 bp AGACTCTCTGACAAACCAAAATTAAGAGAATTAGTTGCCAGTAGACATGCCTTGAATAGCATGAAGGTTTaGATCCCTAATAGGAAATGC +
Preference number: 4 (lower is better)
Translates to: RLSDKPKLRELVASRHALNSMKV*IPNRKC
Trigger: GCATTTCCTATTAGGGATCCAAACCTTCATGCTATT...CAAGGCATGTCTACTGGCAACTAATTCTCTTAATTTTGGTTTGTCAGAGAGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
3UTR CAA 72 bp CCAAAATTAAGAGAATTAGTTGCCAGTAGACATGCCTaGAAAGAAGCATTAAAAGAAGTTCTCTGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: PKLRELVASRHA*KEALKEVLWRE
Trigger: TTCCCTCCAGAGAACTTCTTTTAATGCTTCTTTCAAGGCATGTCTACTGGCAACTAATTCTCTTAATTTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR GCA 90 bp CGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACCTGCAAAGATCCCTAATAGGAAATaGTTCAACAAACAACAATGC +
Preference number: 4 (lower is better)
Translates to: REARIRIILLLYTTLPAKIPNRK*FNKQQC
Trigger: GCATTGTTGTTTGTTGAAGCATTTCCTATTAGGGAT...CTTTGCAGGTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR GCA 90 bp AAGTGCTTATCTTTTAGAGATACATTCTTAGCAGCCCTCACAGCTTTGATCTTCATCCCTAATAGGAAATaGTTCAACAAACAACAATGC +
Preference number: 4 (lower is better)
Translates to: KCLSFRDTFLAALTALIFIPNRK*FNKQQC
Trigger: GCATTGTTGTTTGTTGAAGCATTTCCTATTAGGGAT...GAAGATCAAAGCTGTGAGGGCTGCTAAGAATGTATCTCTAAAAGATAAGCACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CCA 90 bp CGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACCTGCAAAGATGGCACTGTTCAAATaGCATTTATTTTGTAACCCT +
Preference number: 4 (lower is better)
Translates to: REARIRIILLLYTTLPAKMALFK*HLFCNP
Trigger: AGGGTTACAAAATAAATGCCATTTGAACAGTGCCAT...CTTTGCAGGTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CCA 90 bp AGACTCTCTGACAAACCAAAATTAAGAGAATTAGTTGCCAGTAGACATGCCTTGTTTTTAATGGTCCCGTaGATCATTTTGATGAAGTTG +
Preference number: 4 (lower is better)
Translates to: RLSDKPKLRELVASRHALFLMVP*IILMKL
Trigger: CAACTTCATCAAAATGATCCACGGGACCATTAAAAA...CAAGGCATGTCTACTGGCAACTAATTCTCTTAATTTTGGTTTGTCAGAGAGTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS GCA 90 bp CCTAATAGAGGGCCAGGAGCAGGCACACCTTGTGCTGAAGATGGATaGTCAGGCGACAGTGGAGACCAAAGGCTCGCGGGGCAGCTGCTT +
Preference number: 5 (lower is better)
Translates to: PNRGPGAGTPCAEDG*SGDSGDQRLAGQLL
Trigger: AAGCAGCTGCCCCGCGAGCCTTTGGTCTCCACTGTCGCCTGAGCATCCATCTTCAGCACAAGGTGTGCCTGCTCCTGGCCCTCTATTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467785.5
CDS TCA 90 bp CTCATCCTCCAGCCTTTGTGTGTGGTCTCTCTCTCCAGCAGAGGGTaGTCCTGCACTTCTTACATGACAACCACGGGCTCCGAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: LILQPLCVVSLSSRG*SCTSYMTTTGSERK
Trigger: CTTCCTCTCGGAGCCCGTGGTTGTCATGTAAGAAGTGCAGGATCACCCTCTGCTGGAGAGAGAGACCACACACAAAGGCTGGAGGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621338.1
CDS-3UTR CAA 90 bp AGAAAGTACACCCCGGTGCACAGGGGTGTCTGTGTGCCGAGACTGAACAGCAGTTGTTCGGTTTCCATATaGTCTTCACCCTGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: RKYTPVHRGVCVPRLNSSCSVSI*SSPWAS
Trigger: GGAAGCCCAGGGTGAAGACAATATGGAAACCGAACA...ACTGCTGTTCAGTCTCGGCACACAGACACCCCTGTGCACCGGGGTGTACTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CAA 90 bp CACGAGGCTTCCCACCCGGTGTCTGCAGAAGTGACTCCAGATCTGCCTTTGACGCTCACTTTCTCCGAATaGTCGTGGAGACTGTATCTG +
Preference number: 5 (lower is better)
Translates to: HEASHPVSAEVTPDLPLTLTFSE*SWRLYL
Trigger: CAGATACAGTCTCCACGACAATTCGGAGAAAGTGAG...CGTCAAAGGCAGATCTGGAGTCACTTCTGCAGACACCGGGTGGGAAGCCTCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CAA 90 bp AGAAAGTACACCCCGGTGCACAGGGGTGTCTGTGTGCCGAGACTGAACAGCAGTGGGTGGCTCAGTTTGTaGTCCAAAATCATTGGCAGA +
Preference number: 5 (lower is better)
Translates to: RKYTPVHRGVCVPRLNSSGWLSL*SKIIGR
Trigger: TCTGCCAATGATTTTGGACAACAAACTGAGCCACCC...ACTGCTGTTCAGTCTCGGCACACAGACACCCCTGTGCACCGGGGTGTACTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CAA 90 bp TGGATCTGCACCCTACCTTTAGAAGCTGTGTTGCTCTTGGCCTGGGCATGCTCTATCAGCTTTGCTATGTaGGTGCAGGCGGTGTGTTCG +
Preference number: 5 (lower is better)
Translates to: WICTLPLEAVLLLAWACSISFAM*VQAVCS
Trigger: CGAACACACCGCCTGCACCAACATAGCAAAGCTGAT...AGAGCATGCCCAGGCCAAGAGCAACACAGCTTCTAAAGGTAGGGTGCAGATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CAA 90 bp GGTGACACAGCGCTCGCACCAGACCTCCTCCGGCTGATTCACAGGCAGGAAAGACTCGGCAGAGCTGAGTaGATTCAACAAAAGAACAAT +
Preference number: 5 (lower is better)
Translates to: GDTALAPDLLRLIHRQERLGRAE*IQQKNN
Trigger: ATTGTTCTTTTGTTGAATCAACTCAGCTCTGCCGAG...TCTTTCCTGCCTGTGAATCAGCCGGAGGAGGTCTGGTGCGAGCGCTGTGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CAA 90 bp TCACCAGGCGCCGAGACACAGGTCGAGAATCAGTTTCCAGACGAACCAGAATGTAATGCCAATTCAGGTTaGACTGGGCGTGTGTCATGG +
Preference number: 5 (lower is better)
Translates to: SPGAETQVENQFPDEPECNANSG*TGRVSW
Trigger: CCATGACACACGCCCAGTCAAACCTGAATTGGCATT...ACATTCTGGTTCGTCTGGAAACTGATTCTCGACCTGTGTCTCGGCGCCTGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS CCA 90 bp CGCACTTTGGAATGCACTGGAGACCTCCTCGGAAGGTGTATCCCGTaGAACATGAAGTCCTGGATGCAATCATTTTCAATCGCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: RTLECTGDLLGRCIP*NMKSWMQSFSIASS
Trigger: ACTGGAGGCGATTGAAAATGATTGCATCCAGGACTTCATGTTCCACGGGATACACCTTCCGAGGAGGTCTCCAGTGCATTCCAAAGTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356309.8
ENST00000409339.3
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
ENST00000467785.5
CDS TCA 90 bp TCACAACCAAATGGCTGTCTGCCTTGCACTTGCAAAGATAAGGACTaGAACGCAAACGTTCTGCCTTCTTCCTCTGCTCTGGCGCCCAAA +
Preference number: 5 (lower is better)
Translates to: SQPNGCLPCTCKDKD*NANVLPSSSALAPK
Trigger: TTTGGGCGCCAGAGCAGAGGAAGAAGGCAGAACGTTTGCGTTTCAGTCCTTATCTTTGCAAGTGCAAGGCAGACAGCCATTTGGTTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491792.5
CDS GCA 90 bp CGCCGAGACACAGGTCGAGAATCAGTTTCCAGACGAACCAGAATGTaGTCCATGGGACATATTTTCCAAAACTTAGCAGCCCTCACAGCT +
Preference number: 5 (lower is better)
Translates to: RRDTGRESVSRRTRM*SMGHIFQNLAALTA
Trigger: AGCTGTGAGGGCTGCTAAGTTTTGGAAAATATGTCCCATGGAGCACATTCTGGTTCGTCTGGAAACTGATTCTCGACCTGTGTCTCGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356309.8
ENST00000409339.3
ENST00000409423.5
ENST00000441982.5
ENST00000467785.5
CDS CCA 90 bp ACTGGAGACCTCCTCGGAAGGTGTATCCCGTGGAACATGAAGTCCTaGATGCAATCATTTTCAATCGCCTCCAGTATTTTCCCTGAAGCC +
Preference number: 5 (lower is better)
Translates to: TGDLLGRCIPWNMKS*MQSFSIASSIFPEA
Trigger: GGCTTCAGGGAAAATACTGGAGGCGATTGAAAATGATTGCATCCAGGACTTCATGTTCCACGGGATACACCTTCCGAGGAGGTCTCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356309.8
ENST00000409339.3
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
ENST00000467785.5
CDS-3UTR CAA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCGAAGCTGTGTTGCTCTaGGCCTGGGCATGCTCTGTG +
Preference number: 5 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPEAVLL*AWACSV
Trigger: CACAGAGCATGCCCAGGCCAAGAGCAACACAGCTTC...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS TCA 90 bp TGGAATGCACTGGAGACCTCCTCGGAAGGTGTATCCCGTGGAACATaGAGTCCTGGATGCAATCATTTTCAATCGCCTCCAGTATTTTCC +
Preference number: 5 (lower is better)
Translates to: WNALETSSEGVSRGT*SPGCNHFQSPPVFS
Trigger: GGAAAATACTGGAGGCGATTGAAAATGATTGCATCCAGGACTTCATGTTCCACGGGATACACCTTCCGAGGAGGTCTCCAGTGCATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356309.8
ENST00000409339.3
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
ENST00000467785.5
CDS GCA 90 bp GTCAGAAACCCGCAGGCCTTCTTCCGGCTGCTTCCTGAAGCTCCGTaGAATACATTCCAACATTTTCTGAAATACTTTCTGGACTGTGTC +
Preference number: 5 (lower is better)
Translates to: VRNPQAFFRLLPEAP*NTFQHFLKYFLDCV
Trigger: GACACAGTCCAGAAAGTATTTCAGAAAATGTTGGAATGTATTGCACGGAGCTTCAGGAAGCAGCCGGAAGAAGGCCTGCGGGTTTCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441982.5
CDS-3UTR CAA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTTTTCCTGTGTCTTCCTaGGCAGGCAGGCCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: CHCAGPLILSNKQMDVVIFPVSS*AGRPFS
Trigger: GGAGAAAGGCCTGCCTGCCAAGGAAGACACAGGAAA...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR CAA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCTTTCCTGTGTCTTCCTaGGCAGGCAGGCCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPFPVSS*AGRPFS
Trigger: GGAGAAAGGCCTGCCTGCCAAGGAAGACACAGGAAA...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
CDS-3UTR CAA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCAGAACCTCCCGCACTTaGGAATGCACTGGAGACCTC +
Preference number: 5 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPRTSRT*ECTGDL
Trigger: GAGGTCTCCAGTGCATTCCAAAGTGCGGGAGGTTCT...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR CAA 90 bp CGTTTCAAGGGCTTTCAAAAGATGGTTAAGTTTCTTCCGAGGAGCAGAGAGCAAAGAACCTCCCGCACTTaGGAATGCACTGGAGACCTC +
Preference number: 5 (lower is better)
Translates to: RFKGFQKMVKFLPRSREQRTSRT*ECTGDL
Trigger: GAGGTCTCCAGTGCATTCCAAAGTGCGGGAGGTTCT...TTGCTCTCTGCTCCTCGGAAGAAACTTAACCATCTTTTGAAAGCCCTTGAAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CAA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTCCTTTAGAAGCTGTGTaGCTCTTGGCCTGGGCATGC +
Preference number: 5 (lower is better)
Translates to: CHCAGPLILSNKQMDVVIPLEAV*LLAWAC
Trigger: GCATGCCCAGGCCAAGAGCAACACAGCTTCTAAAGG...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR CAA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCCCTTTAGAAGCTGTGTaGCTCTTGGCCTGGGCATGC +
Preference number: 5 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPPLEAV*LLAWAC
Trigger: GCATGCCCAGGCCAAGAGCAACACAGCTTCTAAAGG...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS TCA 90 bp GCTCTTCTACGTCAGAAACCCGCAGGCCTTCTTCCGGCTGCTTCCTaGAGCTCCGTGCAATACATTCCAACATTTTCTGAAATACTTTCT +
Preference number: 5 (lower is better)
Translates to: ALLRQKPAGLLPAAS*SSVQYIPTFSEILS
Trigger: AGAAAGTATTTCAGAAAATGTTGGAATGTATTGCACGGAGCTTCAGGAAGCAGCCGGAAGAAGGCCTGCGGGTTTCTGACGTAGAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441982.5
CDS GCA 90 bp CCATGTTCGGTTTCCATATTGTCTTCACCCTGGGCTTCCACTACCTaGCACCCATCCACTGGGCTTTCTAACAACACATCTGTCAATAAA +
Preference number: 5 (lower is better)
Translates to: PCSVSILSSPWASTT*HPSTGLSNNTSVNK
Trigger: TTTATTGACAGATGTGTTGTTAGAAAGCCCAGTGGATGGGTGGCAGGTAGTGGAAGCCCAGGGTGAAGACAATATGGAAACCGAACATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409339.3
ENST00000409423.5
ENST00000432615.5
CDS GCA 90 bp ATATTTTCCAAAACTTTCCAGACACCTCACAACCAAATGGCTGTCTaGCTTGCACTTGCAAAGATAAGGACCACTACTGGGTCCCTCCGC +
Preference number: 5 (lower is better)
Translates to: IFSKTFQTPHNQMAV*LALAKIRTTTGSLR
Trigger: GCGGAGGGACCCAGTAGTGGTCCTTATCTTTGCAAGTGCAAGGCAGACAGCCATTTGGTTGTGAGGTGTCTGGAAAGTTTTGGAAAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472591.2
CDS GCA 90 bp CGCCGAGACACAGGTCGAGAATCAGTTTCCAGACGAACCAGAATGTaGTCCATGGGACATATTTTCCAAAACTTTCCAGACACCTCACAA +
Preference number: 5 (lower is better)
Translates to: RRDTGRESVSRRTRM*SMGHIFQNFPDTSQ
Trigger: TTGTGAGGTGTCTGGAAAGTTTTGGAAAATATGTCCCATGGAGCACATTCTGGTTCGTCTGGAAACTGATTCTCGACCTGTGTCTCGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472591.2
ENST00000491792.5
CDS-3UTR CAA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCGCAGCCCTCACAGCTTaGATCTTCAACAGCATGTCC +
Preference number: 5 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPAALTA*IFNSMS
Trigger: GGACATGCTGTTGAAGATCAAAGCTGTGAGGGCTGC...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR CAA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTATCAGCTTTGCTATGTaGGTGCAGGCGGTGTGTTCG +
Preference number: 5 (lower is better)
Translates to: CHCAGPLILSNKQMDVVIISFAM*VQAVCS
Trigger: CGAACACACCGCCTGCACCAACATAGCAAAGCTGAT...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR CAA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCATCAGCTTTGCTATGTaGGTGCAGGCGGTGTGTTCG +
Preference number: 5 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPISFAM*VQAVCS
Trigger: CGAACACACCGCCTGCACCAACATAGCAAAGCTGAT...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR CAA 90 bp CACTTAAAGACAGAACAACGAACATCAGCTGAGCTCGTGTCAAATGCCAGTTCCAGCACTCGCGGTTCTTaGGATGAGTCAGCAGATACT +
Preference number: 5 (lower is better)
Translates to: HLKTEQRTSAELVSNASSSTRGS*DESADT
Trigger: AGTATCTGCTGACTCATCCAAAGAACCGCGAGTGCT...GGAACTGGCATTTGACACGAGCTCAGCTGATGTTCGTTGTTCTGTCTTTAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS CCA 90 bp CTTAGACACGGCTTGTACAAACGTCTCACGTTTTTCCATGACAGATaGCACTGTTCAAATGGCATTTATTTTGTAACCCTGGGCTCGGGG +
Preference number: 5 (lower is better)
Translates to: LRHGLYKRLTFFHDR*HCSNGIYFVTLGSG
Trigger: CCCCGAGCCCAGGGTTACAAAATAAATGCCATTTGAACAGTGCCATCTGTCATGGAAAAACGTGAGACGTTTGTACAAGCCGTGTCTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356309.8
ENST00000409339.3
CDS-3UTR CAA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTTGTTCGGTTTCCATATaGTCTTCACCCTGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: CHCAGPLILSNKQMDVVICSVSI*SSPWAS
Trigger: GGAAGCCCAGGGTGAAGACAATATGGAAACCGAACA...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR CAA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCTGTTCGGTTTCCATATaGTCTTCACCCTGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPCSVSI*SSPWAS
Trigger: GGAAGCCCAGGGTGAAGACAATATGGAAACCGAACA...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
CDS-3UTR CAA 90 bp AGTGACTCCAGATCTGCCTTTGACGTTTCAAGGGCTTTCAAAAGATGGTTAAGTGCAGCCCTCACAGCTTaGATCTTCAACAGCATGTCC +
Preference number: 5 (lower is better)
Translates to: SDSRSAFDVSRAFKRWLSAALTA*IFNSMS
Trigger: GGACATGCTGTTGAAGATCAAAGCTGTGAGGGCTGC...ACTTAACCATCTTTTGAAAGCCCTTGAAACGTCAAAGGCAGATCTGGAGTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CAA 90 bp AAGAAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACGAAGCTGTGTTGCTCTaGGCCTGGGCATGCTCTGTG +
Preference number: 5 (lower is better)
Translates to: KKFSGGKEKNIGQNLDQHEAVLL*AWACSV
Trigger: CACAGAGCATGCCCAGGCCAAGAGCAACACAGCTTC...GTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CAA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCAATGCCAATTCAGGTTaGACTGGGCGTGTGTCATGG +
Preference number: 5 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPNANSG*TGRVSW
Trigger: CCATGACACACGCCCAGTCAAACCTGAATTGGCATT...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR CAA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCAGCACTCGCGGTTCTTaGGATGAGTCAGCAGATACT +
Preference number: 5 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPSTRGS*DESADT
Trigger: AGTATCTGCTGACTCATCCAAAGAACCGCGAGTGCT...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS TCA 90 bp TCCTTGGCAGGCAGGCCTTTCTCCCACCAGGTAACACACAAATCCTaGATAGAACTCTGTAGTTTTCGTTCAGACTCAGGTAATGCATAT +
Preference number: 5 (lower is better)
Translates to: SLAGRPFSHQVTHKS*IELCSFRSDSGNAY
Trigger: ATATGCATTACCTGAGTCTGAACGAAAACTACAGAGTTCTATTCAGGATTTGTGTGTTACCTGGTGGGAGAAAGGCCTGCCTGCCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356309.8
ENST00000409339.3
ENST00000409423.5
ENST00000432615.5
ENST00000467785.5
CDS-3UTR CAA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTCTCCTTAGACACGGCTaGTACAAACGTCTCACGTTT +
Preference number: 5 (lower is better)
Translates to: CHCAGPLILSNKQMDVVILLRHG*YKRLTF
Trigger: AAACGTGAGACGTTTGTACAAGCCGTGTCTAAGGAG...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR CAA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCCTCCTTAGACACGGCTaGTACAAACGTCTCACGTTT +
Preference number: 5 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPLLRHG*YKRLTF
Trigger: AAACGTGAGACGTTTGTACAAGCCGTGTCTAAGGAG...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
CDS-3UTR CAA 90 bp CGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACCTGCAAAGTTTCCTGTGTCTTCCTaGGCAGGCAGGCCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: REARIRIILLLYTTLPAKFPVSS*AGRPFS
Trigger: GGAGAAAGGCCTGCCTGCCAAGGAAGACACAGGAAA...CTTTGCAGGTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CAA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCGGGTGGCTCAGTTTGTaGTCCAAAATCATTGGCAGA +
Preference number: 5 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPGWLSL*SKIIGR
Trigger: TCTGCCAATGATTTTGGACAACAAACTGAGCCACCC...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR CAA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTCTCACTTTCTCCGAATaGTCGTGGAGACTGTATCTG +
Preference number: 5 (lower is better)
Translates to: CHCAGPLILSNKQMDVVILTFSE*SWRLYL
Trigger: CAGATACAGTCTCCACGACAATTCGGAGAAAGTGAG...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR CAA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCCTCACTTTCTCCGAATaGTCGTGGAGACTGTATCTG +
Preference number: 5 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPLTFSE*SWRLYL
Trigger: CAGATACAGTCTCCACGACAATTCGGAGAAAGTGAG...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR CAA 90 bp TCAGAAAGATGCTCTGGAGGGGTAAGCTCTTCTACGTCAGAAACCTTCCGTAGCTTTACTGACAGTGTTTaGTCCAGAACAGTCACATTC +
Preference number: 5 (lower is better)
Translates to: SERCSGGVSSSTSETFRSFTDSV*SRTVTF
Trigger: GAATGTGACTGTTCTGGACAAAACACTGTCAGTAAA...GCTACGGAAGGTTTCTGACGTAGAAGAGCTTACCCCTCCAGAGCATCTTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CAA 90 bp GACATTAGCATGAATAAAGGGATCTTGCAGCGATCATCCTTAAATACTTTCAGAGAAGCTGTGTTGCTCTaGGCCTGGGCATGCTCTGTG +
Preference number: 5 (lower is better)
Translates to: DISMNKGILQRSSLNTFREAVLL*AWACSV
Trigger: CACAGAGCATGCCCAGGCCAAGAGCAACACAGCTTC...TCTGAAAGTATTTAAGGATGATCGCTGCAAGATCCCTTTATTCATGCTAATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CAA 90 bp CGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACCTGCAAAGCCTTTAGAAGCTGTGTaGCTCTTGGCCTGGGCATGC +
Preference number: 5 (lower is better)
Translates to: REARIRIILLLYTTLPAKPLEAV*LLAWAC
Trigger: GCATGCCCAGGCCAAGAGCAACACAGCTTCTAAAGG...CTTTGCAGGTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CAA 90 bp TCTGAAATACTTTCTGGACTGTGTCCAACAGCATTGCAACTTCTTCATCTGAATCCTTTAGAAGCTGTGTaGCTCTTGGCCTGGGCATGC +
Preference number: 5 (lower is better)
Translates to: SEILSGLCPTALQLLHLNPLEAV*LLAWAC
Trigger: GCATGCCCAGGCCAAGAGCAACACAGCTTCTAAAGG...ATTCAGATGAAGAAGTTGCAATGCTGTTGGACACAGTCCAGAAAGTATTTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CAA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCACTCCAGATCTGCCTTaGACGTTTCAAGGGCTTTCA +
Preference number: 5 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPTPDLP*TFQGLS
Trigger: TGAAAGCCCTTGAAACGTCAAAGGCAGATCTGGAGT...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS TCA 90 bp GGCATTTATTTTGTAACCCTTAGCAAGATGCTGGCTCGGCAGAGCTaGGTTGATTCAACAAAAGAACAATCTGATCCCAGCTGCAGATTC +
Preference number: 5 (lower is better)
Translates to: GIYFVTLSKMLARQS*VDSTKEQSDPSCRF
Trigger: GAATCTGCAGCTGGGATCAGATTGTTCTTTTGTTGAATCAACTCAGCTCTGCCGAGCCAGCATCTTGCTAAGGGTTACAAAATAAATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CAA 90 bp AAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACAAAAGAACCTCCCGCACTTaGGAATGCACTGGAGACCTC +
Preference number: 5 (lower is better)
Translates to: KFSGGKEKNIGQNLDQHKRTSRT*ECTGDL
Trigger: GAGGTCTCCAGTGCATTCCAAAGTGCGGGAGGTTCT...TTTGTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CAA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCAATGGGTGGCTCAGTTaGTTGTCCAAAATCATTGGC +
Preference number: 5 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPNGWLS*LSKIIG
Trigger: GCCAATGATTTTGGACAACAAACTGAGCCACCCATT...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR CAA 90 bp CGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACCTGCAAAGGCAGCCCTCACAGCTTaGATCTTCAACAGCATGTCC +
Preference number: 5 (lower is better)
Translates to: REARIRIILLLYTTLPAKAALTA*IFNSMS
Trigger: GGACATGCTGTTGAAGATCAAAGCTGTGAGGGCTGC...CTTTGCAGGTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CAA 90 bp TCAGAAAGATGCTCTGGAGGGGTAAGCTCTTCTACGTCAGAAACCTTCCGTAGCATGAATAAAGGGATCTaGCAGCGATCATCCTTAAAT +
Preference number: 5 (lower is better)
Translates to: SERCSGGVSSSTSETFRSMNKGI*QRSSLN
Trigger: ATTTAAGGATGATCGCTGCAAGATCCCTTTATTCAT...GCTACGGAAGGTTTCTGACGTAGAAGAGCTTACCCCTCCAGAGCATCTTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CAA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCAAATCCCTTCACTGTTaGCATGATTCCAAGACTCCG +
Preference number: 5 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPKSLHC*HDSKTP
Trigger: CGGAGTCTTGGAATCATGCAAACAGTGAAGGGATTT...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR CAA 90 bp CACTTAAAGACAGAACAACGAACATCAGCTGAGCTCGTGTCAAATGCCAGTTCCCTGTGTCCAACAGCATaGCAACTTCTTCATCTGAAT +
Preference number: 5 (lower is better)
Translates to: HLKTEQRTSAELVSNASSLCPTA*QLLHLN
Trigger: ATTCAGATGAAGAAGTTGCAATGCTGTTGGACACAG...GGAACTGGCATTTGACACGAGCTCAGCTGATGTTCGTTGTTCTGTCTTTAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS GCA 90 bp AGCAGGCACAAGCCCAATCCAGATTCAAGAGGAGAGGACATAGGCTaGAGAGGGTTATTTAACAGGATTATCCACAATGTTAAATTTCCT +
Preference number: 5 (lower is better)
Translates to: SRHKPNPDSRGEDIG*RGLFNRIIHNVKFP
Trigger: AGGAAATTTAACATTGTGGATAATCCTGTTAAATAACCCTCTGCAGCCTATGTCCTCTCCTCTTGAATCTGGATTGGGCTTGTGCCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621338.1
CDS-3UTR CAA 90 bp CGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACCTGCAAAGTGTTCGGTTTCCATATaGTCTTCACCCTGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: REARIRIILLLYTTLPAKCSVSI*SSPWAS
Trigger: GGAAGCCCAGGGTGAAGACAATATGGAAACCGAACA...CTTTGCAGGTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CAA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCGTCCCGTGGATCATTTaGATGAAGTTGATATTCCAG +
Preference number: 5 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPVPWII*MKLIFQ
Trigger: CTGGAATATCAACTTCATCAAAATGATCCACGGGAC...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR CAA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCCTGCCGAACTTTCTTTaGATGGTGAAAGTAACTCAG +
Preference number: 5 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPLPNFL*MVKVTQ
Trigger: CTGAGTTACTTTCACCATCAAAAGAAAGTTCGGCAG...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR CAA 90 bp ACAAGGAACGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACATCAGCTTTGCTATGTaGGTGCAGGCGGTGTGTTCG +
Preference number: 5 (lower is better)
Translates to: TRNERQGLGLFCYYIPPYISFAM*VQAVCS
Trigger: CGAACACACCGCCTGCACCAACATAGCAAAGCTGAT...GTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCGTTCCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CAA 90 bp AAGAAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACAATGCCAATTCAGGTTaGACTGGGCGTGTGTCATGG +
Preference number: 5 (lower is better)
Translates to: KKFSGGKEKNIGQNLDQHNANSG*TGRVSW
Trigger: CCATGACACACGCCCAGTCAAACCTGAATTGGCATT...GTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CAA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTCTGTGTCCAACAGCATaGCAACTTCTTCATCTGAAT +
Preference number: 5 (lower is better)
Translates to: CHCAGPLILSNKQMDVVILCPTA*QLLHLN
Trigger: ATTCAGATGAAGAAGTTGCAATGCTGTTGGACACAG...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR CAA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCCTGTGTCCAACAGCATaGCAACTTCTTCATCTGAAT +
Preference number: 5 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPLCPTA*QLLHLN
Trigger: ATTCAGATGAAGAAGTTGCAATGCTGTTGGACACAG...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR CAA 90 bp AAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACAAAAGGCAGAAGGATAGATaGAGTCCAGGAGTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: KFSGGKEKNIGQNLDQHKRQKDR*SPGVQE
Trigger: CTCCTGGACTCCTGGACTCAATCTATCCTTCTGCCT...TTTGTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CAA 90 bp AAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACAAATGCAGTCCTAGCCAATaGGGACTGAGGCAGAAGGAT +
Preference number: 5 (lower is better)
Translates to: KFSGGKEKNIGQNLDQHKCSPSQ*GLRQKD
Trigger: ATCCTTCTGCCTCAGTCCCAATTGGCTAGGACTGCA...TTTGTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CAA 90 bp AAGAAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACCTCCTTAGACACGGCTaGTACAAACGTCTCACGTTT +
Preference number: 5 (lower is better)
Translates to: KKFSGGKEKNIGQNLDQHLLRHG*YKRLTF
Trigger: AAACGTGAGACGTTTGTACAAGCCGTGTCTAAGGAG...GTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CAA 90 bp AAGTGCTTATCTTTTAGAGATACATTCTTAGCAGCCCTCACAGCTTTGATCTTCCTCCTTAGACACGGCTaGTACAAACGTCTCACGTTT +
Preference number: 5 (lower is better)
Translates to: KCLSFRDTFLAALTALIFLLRHG*YKRLTF
Trigger: AAACGTGAGACGTTTGTACAAGCCGTGTCTAAGGAG...GAAGATCAAAGCTGTGAGGGCTGCTAAGAATGTATCTCTAAAAGATAAGCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CAA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTTGCTTTTTCTCATTTTaGAGCCATGTTCGGTTTCCA +
Preference number: 5 (lower is better)
Translates to: CHCAGPLILSNKQMDVVICFFSF*SHVRFP
Trigger: TGGAAACCGAACATGGCTCAAAAATGAGAAAAAGCA...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR CAA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCTGCTTTTTCTCATTTTaGAGCCATGTTCGGTTTCCA +
Preference number: 5 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPCFFSF*SHVRFP
Trigger: TGGAAACCGAACATGGCTCAAAAATGAGAAAAAGCA...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
CDS-3UTR CAA 90 bp AGTGACTCCAGATCTGCCTTTGACGTTTCAAGGGCTTTCAAAAGATGGTTAAGTCTGCCGAACTTTCTTTaGATGGTGAAAGTAACTCAG +
Preference number: 5 (lower is better)
Translates to: SDSRSAFDVSRAFKRWLSLPNFL*MVKVTQ
Trigger: CTGAGTTACTTTCACCATCAAAAGAAAGTTCGGCAG...ACTTAACCATCTTTTGAAAGCCCTTGAAACGTCAAAGGCAGATCTGGAGTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CAA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCACAACAATGCAGCATTaGATCGAACTTCAGAGTTTC +
Preference number: 5 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPTTMQH*IELQSF
Trigger: GAAACTCTGAAGTTCGATCAAATGCTGCATTGTTGT...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR CAA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTTTTACTGACAGTGTTTaGTCCAGAACAGTCACATTC +
Preference number: 5 (lower is better)
Translates to: CHCAGPLILSNKQMDVVIFTDSV*SRTVTF
Trigger: GAATGTGACTGTTCTGGACAAAACACTGTCAGTAAA...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR CAA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCTTTACTGACAGTGTTTaGTCCAGAACAGTCACATTC +
Preference number: 5 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPFTDSV*SRTVTF
Trigger: GAATGTGACTGTTCTGGACAAAACACTGTCAGTAAA...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR CAA 90 bp ACAAGGAACGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACAGCACTCGCGGTTCTTaGGATGAGTCAGCAGATACT +
Preference number: 5 (lower is better)
Translates to: TRNERQGLGLFCYYIPPYSTRGS*DESADT
Trigger: AGTATCTGCTGACTCATCCAAAGAACCGCGAGTGCT...GTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCGTTCCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CAA 90 bp AAGTGCTTATCTTTTAGAGATACATTCTTAGCAGCCCTCACAGCTTTGATCTTCACTCCAGATCTGCCTTaGACGTTTCAAGGGCTTTCA +
Preference number: 5 (lower is better)
Translates to: KCLSFRDTFLAALTALIFTPDLP*TFQGLS
Trigger: TGAAAGCCCTTGAAACGTCAAAGGCAGATCTGGAGT...GAAGATCAAAGCTGTGAGGGCTGCTAAGAATGTATCTCTAAAAGATAAGCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CAA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTGTAGGTCTGGATAATTaGCTGATAAATGACCCTATG +
Preference number: 5 (lower is better)
Translates to: CHCAGPLILSNKQMDVVIVGLDN*LINDPM
Trigger: CATAGGGTCATTTATCAGCAAATTATCCAGACCTAC...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR CAA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCGTAGGTCTGGATAATTaGCTGATAAATGACCCTATG +
Preference number: 5 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPVGLDN*LINDPM
Trigger: CATAGGGTCATTTATCAGCAAATTATCCAGACCTAC...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000441982.5
CDS CCA 90 bp CTTAGACACGGCTTGTACAAACGTCTCACGTTTTTCCATGACAGATaGCACTGTTCAAATGGCATTTATTTTGTAACCCATCCAGTTATC +
Preference number: 5 (lower is better)
Translates to: LRHGLYKRLTFFHDR*HCSNGIYFVTHPVI
Trigger: GATAACTGGATGGGTTACAAAATAAATGCCATTTGAACAGTGCCATCTGTCATGGAAAAACGTGAGACGTTTGTACAAGCCGTGTCTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409423.5
CDS-3UTR CAA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTATCAAGTTGAACAAATaGCAAAAACTCTCCAACCAG +
Preference number: 5 (lower is better)
Translates to: CHCAGPLILSNKQMDVVIIKLNK*QKLSNQ
Trigger: CTGGTTGGAGAGTTTTTGCAATTTGTTCAACTTGAT...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR CAA 90 bp AAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACAAAGGGTGGCTCAGTTTGTaGTCCAAAATCATTGGCAGA +
Preference number: 5 (lower is better)
Translates to: KFSGGKEKNIGQNLDQHKGWLSL*SKIIGR
Trigger: TCTGCCAATGATTTTGGACAACAAACTGAGCCACCC...TTTGTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CAA 90 bp AAGAAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACAATGGGTGGCTCAGTTaGTTGTCCAAAATCATTGGC +
Preference number: 5 (lower is better)
Translates to: KKFSGGKEKNIGQNLDQHNGWLS*LSKIIG
Trigger: GCCAATGATTTTGGACAACAAACTGAGCCACCCATT...GTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CAA 90 bp AAGTGCTTATCTTTTAGAGATACATTCTTAGCAGCCCTCACAGCTTTGATCTTCAATGGGTGGCTCAGTTaGTTGTCCAAAATCATTGGC +
Preference number: 5 (lower is better)
Translates to: KCLSFRDTFLAALTALIFNGWLS*LSKIIG
Trigger: GCCAATGATTTTGGACAACAAACTGAGCCACCCATT...GAAGATCAAAGCTGTGAGGGCTGCTAAGAATGTATCTCTAAAAGATAAGCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CAA 90 bp AAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACAAACTCACTTTCTCCGAATaGTCGTGGAGACTGTATCTG +
Preference number: 5 (lower is better)
Translates to: KFSGGKEKNIGQNLDQHKLTFSE*SWRLYL
Trigger: CAGATACAGTCTCCACGACAATTCGGAGAAAGTGAG...TTTGTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CAA 90 bp TGCCACTGCGCCGGGCCCCTAATACTTTCAAATAAACAAATGGATGTTGTCATTATGAATAAAGGGATCTaGCAGCGATCATCCTTAAAT +
Preference number: 5 (lower is better)
Translates to: CHCAGPLILSNKQMDVVIMNKGI*QRSSLN
Trigger: ATTTAAGGATGATCGCTGCAAGATCCCTTTATTCAT...AATGACAACATCCATTTGTTTATTTGAAAGTATTAGGGGCCCGGCGCAGTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356309.8
CDS-3UTR CAA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCATGAATAAAGGGATCTaGCAGCGATCATCCTTAAAT +
Preference number: 5 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPMNKGI*QRSSLN
Trigger: ATTTAAGGATGATCGCTGCAAGATCCCTTTATTCAT...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR CAA 90 bp ACAAGGAACGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACACTCCAGATCTGCCTTaGACGTTTCAAGGGCTTTCA +
Preference number: 5 (lower is better)
Translates to: TRNERQGLGLFCYYIPPYTPDLP*TFQGLS
Trigger: TGAAAGCCCTTGAAACGTCAAAGGCAGATCTGGAGT...GTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCGTTCCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CAA 90 bp CGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACCTGCAAAGAAATCCCTTCACTGTTaGCATGATTCCAAGACTCCG +
Preference number: 5 (lower is better)
Translates to: REARIRIILLLYTTLPAKKSLHC*HDSKTP
Trigger: CGGAGTCTTGGAATCATGCAAACAGTGAAGGGATTT...CTTTGCAGGTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CAA 90 bp AAGTGCTTATCTTTTAGAGATACATTCTTAGCAGCCCTCACAGCTTTGATCTTCAAATCCCTTCACTGTTaGCATGATTCCAAGACTCCG +
Preference number: 5 (lower is better)
Translates to: KCLSFRDTFLAALTALIFKSLHC*HDSKTP
Trigger: CGGAGTCTTGGAATCATGCAAACAGTGAAGGGATTT...GAAGATCAAAGCTGTGAGGGCTGCTAAGAATGTATCTCTAAAAGATAAGCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CAA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCTTCCTATTAAACACCTaGAAAATGGTGGAAGATCAG +
Preference number: 5 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPFLLNT*KMVEDQ
Trigger: CTGATCTTCCACCATTTTCAAGGTGTTTAATAGGAA...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR CAA 90 bp ACGCAGGCACTAGGCAAAATTGAAGAAGTTTTGAGTTATCTCCTCCATAACCCCTCTGGAGATGTTGGCTaGGTTATGAATTCAAAAGTT +
Preference number: 5 (lower is better)
Translates to: TQALGKIEEVLSYLLHNPSGDVG*VMNSKV
Trigger: AACTTTTGAATTCATAACCAAGCCAACATCTCCAGA...GGGGTTATGGAGGAGATAACTCAAAACTTCTTCAATTTTGCCTAGTGCCTGCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
CDS-3UTR CAA 90 bp CGTTTCAAGGGCTTTCAAAAGATGGTTAAGTTTCTTCCGAGGAGCAGAGAGCAATCTGGAGATGTTGGCTaGGTTATGAATTCAAAAGTT +
Preference number: 5 (lower is better)
Translates to: RFKGFQKMVKFLPRSREQSGDVG*VMNSKV
Trigger: AACTTTTGAATTCATAACCAAGCCAACATCTCCAGA...TTGCTCTCTGCTCCTCGGAAGAAACTTAACCATCTTTTGAAAGCCCTTGAAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CAA 90 bp CGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACCTGCAAAGAGGCGAGTAGATCACTaGAGATCAAGAATTCGAGAC +
Preference number: 5 (lower is better)
Translates to: REARIRIILLLYTTLPAKRRVDH*RSRIRD
Trigger: GTCTCGAATTCTTGATCTCAAGTGATCTACTCGCCT...CTTTGCAGGTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CAA 90 bp AAGAAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACGTCCCGTGGATCATTTaGATGAAGTTGATATTCCAG +
Preference number: 5 (lower is better)
Translates to: KKFSGGKEKNIGQNLDQHVPWII*MKLIFQ
Trigger: CTGGAATATCAACTTCATCAAAATGATCCACGGGAC...GTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CAA 90 bp CGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACCTGCAAAGCTGTGTCCAACAGCATaGCAACTTCTTCATCTGAAT +
Preference number: 5 (lower is better)
Translates to: REARIRIILLLYTTLPAKLCPTA*QLLHLN
Trigger: ATTCAGATGAAGAAGTTGCAATGCTGTTGGACACAG...CTTTGCAGGTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CAA 90 bp AAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACAAAAGGTACAAGAATCGTTaGAACTTAGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: KFSGGKEKNIGQNLDQHKRYKNR*NLGGRG
Trigger: ACCTCTGCCTCCTAAGTTCAAACGATTCTTGTACCT...TTTGTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CAA 90 bp AAGAAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACTGCTTTTTCTCATTTTaGAGCCATGTTCGGTTTCCA +
Preference number: 5 (lower is better)
Translates to: KKFSGGKEKNIGQNLDQHCFFSF*SHVRFP
Trigger: TGGAAACCGAACATGGCTCAAAAATGAGAAAAAGCA...GTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CAA 90 bp GACATTAGCATGAATAAAGGGATCTTGCAGCGATCATCCTTAAATACTTTCAGAGTCCCGTGGATCATTTaGATGAAGTTGATATTCCAG +
Preference number: 5 (lower is better)
Translates to: DISMNKGILQRSSLNTFRVPWII*MKLIFQ
Trigger: CTGGAATATCAACTTCATCAAAATGATCCACGGGAC...TCTGAAAGTATTTAAGGATGATCGCTGCAAGATCCCTTTATTCATGCTAATGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CAA 90 bp ACAAGGAACGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACCTGCCGAACTTTCTTTaGATGGTGAAAGTAACTCAG +
Preference number: 5 (lower is better)
Translates to: TRNERQGLGLFCYYIPPYLPNFL*MVKVTQ
Trigger: CTGAGTTACTTTCACCATCAAAAGAAAGTTCGGCAG...GTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCGTTCCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CAA 90 bp CGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACCTGCAAAGACAACAATGCAGCATTaGATCGAACTTCAGAGTTTC +
Preference number: 5 (lower is better)
Translates to: REARIRIILLLYTTLPAKTTMQH*IELQSF
Trigger: GAAACTCTGAAGTTCGATCAAATGCTGCATTGTTGT...CTTTGCAGGTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CAA 90 bp AAGTGCTTATCTTTTAGAGATACATTCTTAGCAGCCCTCACAGCTTTGATCTTCACAACAATGCAGCATTaGATCGAACTTCAGAGTTTC +
Preference number: 5 (lower is better)
Translates to: KCLSFRDTFLAALTALIFTTMQH*IELQSF
Trigger: GAAACTCTGAAGTTCGATCAAATGCTGCATTGTTGT...GAAGATCAAAGCTGTGAGGGCTGCTAAGAATGTATCTCTAAAAGATAAGCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CAA 90 bp AGACTCTCTGACAAACCAAAATTAAGAGAATTAGTTGCCAGTAGACATGCCTTGGTAGGTCTGGATAATTaGCTGATAAATGACCCTATG +
Preference number: 5 (lower is better)
Translates to: RLSDKPKLRELVASRHALVGLDN*LINDPM
Trigger: CATAGGGTCATTTATCAGCAAATTATCCAGACCTAC...CAAGGCATGTCTACTGGCAACTAATTCTCTTAATTTTGGTTTGTCAGAGAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CAA 90 bp GACATTAGCATGAATAAAGGGATCTTGCAGCGATCATCCTTAAATACTTTCAGATGCTTTTTCTCATTTTaGAGCCATGTTCGGTTTCCA +
Preference number: 5 (lower is better)
Translates to: DISMNKGILQRSSLNTFRCFFSF*SHVRFP
Trigger: TGGAAACCGAACATGGCTCAAAAATGAGAAAAAGCA...TCTGAAAGTATTTAAGGATGATCGCTGCAAGATCCCTTTATTCATGCTAATGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CAA 90 bp AAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACAAATTTACTGACAGTGTTTaGTCCAGAACAGTCACATTC +
Preference number: 5 (lower is better)
Translates to: KFSGGKEKNIGQNLDQHKFTDSV*SRTVTF
Trigger: GAATGTGACTGTTCTGGACAAAACACTGTCAGTAAA...TTTGTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CAA 90 bp CGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACCTGCAAAGATGAATAAAGGGATCTaGCAGCGATCATCCTTAAAT +
Preference number: 5 (lower is better)
Translates to: REARIRIILLLYTTLPAKMNKGI*QRSSLN
Trigger: ATTTAAGGATGATCGCTGCAAGATCCCTTTATTCAT...CTTTGCAGGTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CAA 90 bp AAGTGCTTATCTTTTAGAGATACATTCTTAGCAGCCCTCACAGCTTTGATCTTCTTCCTATTAAACACCTaGAAAATGGTGGAAGATCAG +
Preference number: 5 (lower is better)
Translates to: KCLSFRDTFLAALTALIFFLLNT*KMVEDQ
Trigger: CTGATCTTCCACCATTTTCAAGGTGTTTAATAGGAA...GAAGATCAAAGCTGTGAGGGCTGCTAAGAATGTATCTCTAAAAGATAAGCACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS-3UTR CAA 90 bp AAGTTCTCTGGAGGGAAGGAAAAGAATATAGGTCAGAATTTGGATCAACACAAAGCCAGTAGACATGCCTaGAAAGAAGCATTAAAAGAA +
Preference number: 5 (lower is better)
Translates to: KFSGGKEKNIGQNLDQHKASRHA*KEALKE
Trigger: TTCTTTTAATGCTTCTTTCAAGGCATGTCTACTGGC...TTTGTGTTGATCCAAATTCTGACCTATATTCTTTTCCTTCCCTCCAGAGAACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS-3UTR CAA 90 bp ACAAGGAACGAGAGGCAAGGATTAGGATTATTTTGTTATTATATACCACCCTACTTCCTATTAAACACCTaGAAAATGGTGGAAGATCAG +
Preference number: 5 (lower is better)
Translates to: TRNERQGLGLFCYYIPPYFLLNT*KMVEDQ
Trigger: CTGATCTTCCACCATTTTCAAGGTGTTTAATAGGAA...GTAGGGTGGTATATAATAACAAAATAATCCTAATCCTTGCCTCTCGTTCCTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS TCA 90 bp AGCTCTTCAAACTGTTTCTGGATTTCACTATCCATTTCAATAGCATaGAGGTTTGGATCCCTAATAGGAAATGCTTCAACAAACAACAAT +
Preference number: 5 (lower is better)
Translates to: SSSNCFWISLSISIA*RFGSLIGNASTNNN
Trigger: ATTGTTGTTTGTTGAAGCATTTCCTATTAGGGATCCAAACCTTCATGCTATTGAAATGGATAGTGAAATCCAGAAACAGTTTGAAGAGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356309.8
ENST00000409339.3
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
ENST00000467785.5
CDS TCA 72 bp CAGCCTTTGTGTGTGGTCTCTCTCTCCAGCAGAGGGTaGTCCTGCACTTCTTACATGACAACCACGGGCTCC +
Preference number: 6 (lower is better)
Translates to: QPLCVVSLSSRG*SCTSYMTTTGS
Trigger: GGAGCCCGTGGTTGTCATGTAAGAAGTGCAGGATCACCCTCTGCTGGAGAGAGAGACCACACACAAAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621338.1
CDS GCA 72 bp GACACCTCACAACCAAATGGCTGTCTGCCTTGCACTTaGAAAGATAAGGACCACTACTGGGTCCCTCCGCCT +
Preference number: 6 (lower is better)
Translates to: DTSQPNGCLPCT*KDKDHYWVPPP
Trigger: AGGCGGAGGGACCCAGTAGTGGTCCTTATCTTTGCAAGTGCAAGGCAGACAGCCATTTGGTTGTGAGGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472591.2
CDS CCA 72 bp TTTGAGCCATGTTCGGTTTCCATATTGTCTTCACCCTaGGCTTCCACTACCTGCCACCCATCCACTGGGCTT +
Preference number: 6 (lower is better)
Translates to: FEPCSVSILSSP*ASTTCHPSTGL
Trigger: AAGCCCAGTGGATGGGTGGCAGGTAGTGGAAGCCCAGGGTGAAGACAATATGGAAACCGAACATGGCTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409339.3
ENST00000409423.5
ENST00000432615.5
CDS TCA 72 bp CTGGAGACCTCCTCGGAAGGTGTATCCCGTGGAACATaGAGTCCTGGATGCAATCATTTTCAATCGCCTCCA +
Preference number: 6 (lower is better)
Translates to: LETSSEGVSRGT*SPGCNHFQSPP
Trigger: TGGAGGCGATTGAAAATGATTGCATCCAGGACTTCATGTTCCACGGGATACACCTTCCGAGGAGGTCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356309.8
ENST00000409339.3
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
ENST00000467785.5
CDS CCA 72 bp AAAGTAACTCAGAACCTCCCGCACTTTGGAATGCACTaGAGACCTCCTCGGAAGGTGTATCCCGTGGAACAT +
Preference number: 6 (lower is better)
Translates to: KVTQNLPHFGMH*RPPRKVYPVEH
Trigger: ATGTTCCACGGGATACACCTTCCGAGGAGGTCTCCAGTGCATTCCAAAGTGCGGGAGGTTCTGAGTTACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356309.8
ENST00000409339.3
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
ENST00000467785.5
CDS GCA 72 bp GTTTCCATATTGTCTTCACCCTGGGCTTCCACTACCTaGCACCCATCCACTGGGCTTTCTAACAACACATCT +
Preference number: 6 (lower is better)
Translates to: VSILSSPWASTT*HPSTGLSNNTS
Trigger: AGATGTGTTGTTAGAAAGCCCAGTGGATGGGTGGCAGGTAGTGGAAGCCCAGGGTGAAGACAATATGGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409339.3
ENST00000409423.5
ENST00000432615.5
CDS GCA 72 bp TTTCCAGACACCTCACAACCAAATGGCTGTCTGCCTTaGACTTGCAAAGATAAGGACCACTACTGGGTCCCT +
Preference number: 6 (lower is better)
Translates to: FPDTSQPNGCLP*TCKDKDHYWVP
Trigger: AGGGACCCAGTAGTGGTCCTTATCTTTGCAAGTGCAAGGCAGACAGCCATTTGGTTGTGAGGTGTCTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472591.2
CDS CAA 90 bp ACAGCAGAGGCCGGCATAAAGGACATTAGCATGAATAAAGGGATCTaGCAGCGATCATCAGTCACATTCTCCTTCTCCCTTCCGTCCTCT +
Preference number: 6 (lower is better)
Translates to: TAEAGIKDISMNKGI*QRSSVTFSFSLPSS
Trigger: AGAGGACGGAAGGGAGAAGGAGAATGTGACTGATGATCGCTGCAAGATCCCTTTATTCATGCTAATGTCCTTTATGCCGGCCTCTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474940.5
ENST00000475918.5
CDS TCA 72 bp AATGGCTGTCTGCCTTGCACTTGCAAAGATAAGGACTaGAACGCAAACGTTCTGCCTTCTTCCTCTGCTCTG +
Preference number: 6 (lower is better)
Translates to: NGCLPCTCKDKD*NANVLPSSSAL
Trigger: CAGAGCAGAGGAAGAAGGCAGAACGTTTGCGTTTCAGTCCTTATCTTTGCAAGTGCAAGGCAGACAGCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491792.5
CDS TCA 72 bp GGCAGGCCTTTCTCCCACCAGGTAACACACAAATCCTaGATAGAACTCTGTAGTTTTCGTTCAGACTCAGGT +
Preference number: 6 (lower is better)
Translates to: GRPFSHQVTHKS*IELCSFRSDSG
Trigger: ACCTGAGTCTGAACGAAAACTACAGAGTTCTATTCAGGATTTGTGTGTTACCTGGTGGGAGAAAGGCCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356309.8
ENST00000409339.3
ENST00000409423.5
ENST00000432615.5
ENST00000467785.5
CDS GCA 72 bp AAAACTTTCCAGACACCTCACAACCAAATGGCTGTCTaGCTTGCACTTGCAAAGATAAGGACCACTACTGGG +
Preference number: 6 (lower is better)
Translates to: KTFQTPHNQMAV*LALAKIRTTTG
Trigger: CCCAGTAGTGGTCCTTATCTTTGCAAGTGCAAGGCAGACAGCCATTTGGTTGTGAGGTGTCTGGAAAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472591.2
CDS CCA 72 bp CTCCTCGGAAGGTGTATCCCGTGGAACATGAAGTCCTaGATGCAATCATTTTCAATCGCCTCCAGTATTTTC +
Preference number: 6 (lower is better)
Translates to: LLGRCIPWNMKS*MQSFSIASSIF
Trigger: GAAAATACTGGAGGCGATTGAAAATGATTGCATCCAGGACTTCATGTTCCACGGGATACACCTTCCGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356309.8
ENST00000409339.3
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
ENST00000467785.5
CDS CAA 72 bp CTTTTTCTCATTTTTGAGCCATGTTCGGTTTCCATATaGTCTTCACCCTGGGCTTCCACTACCTGCCACCCA +
Preference number: 6 (lower is better)
Translates to: LFLIFEPCSVSI*SSPWASTTCHP
Trigger: TGGGTGGCAGGTAGTGGAAGCCCAGGGTGAAGACAATATGGAAACCGAACATGGCTCAAAAATGAGAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409339.3
ENST00000409423.5
ENST00000432615.5
CDS TCA 72 bp TTTGTAACCCTTAGCAAGATGCTGGCTCGGCAGAGCTaGGTTGATTCAACAAAAGAACAATCTGATCCCAGC +
Preference number: 6 (lower is better)
Translates to: FVTLSKMLARQS*VDSTKEQSDPS
Trigger: GCTGGGATCAGATTGTTCTTTTGTTGAATCAACTCAGCTCTGCCGAGCCAGCATCTTGCTAAGGGTTACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS GCA 72 bp ACAGGTCGAGAATCAGTTTCCAGACGAACCAGAATGTaGTCCATGGGACATATTTTCCAAAACTTAGCAGCC +
Preference number: 6 (lower is better)
Translates to: TGRESVSRRTRM*SMGHIFQNLAA
Trigger: GGCTGCTAAGTTTTGGAAAATATGTCCCATGGAGCACATTCTGGTTCGTCTGGAAACTGATTCTCGACCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356309.8
ENST00000409339.3
ENST00000409423.5
ENST00000441982.5
ENST00000467785.5
CDS CCA 72 bp AAGACACATATAGATAGAAATTACATTAGCTGGGTCTaGTGGTGTGTGCCTGCAGTCCTAGCCAATTGGGAC +
Preference number: 6 (lower is better)
Translates to: KTHIDRNYISWV*WCVPAVLANWD
Trigger: GTCCCAATTGGCTAGGACTGCAGGCACACACCACCAGACCCAGCTAATGTAATTTCTATCTATATGTGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409339.3
CDS CAA 72 bp GCCGGCATAAAGGACATTAGCATGAATAAAGGGATCTaGCAGCGATCATCAGTCACATTCTCCTTCTCCCTT +
Preference number: 6 (lower is better)
Translates to: AGIKDISMNKGI*QRSSVTFSFSL
Trigger: AAGGGAGAAGGAGAATGTGACTGATGATCGCTGCAAGATCCCTTTATTCATGCTAATGTCCTTTATGCCGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474940.5
ENST00000475918.5
CDS GCA 72 bp ACAGGTCGAGAATCAGTTTCCAGACGAACCAGAATGTaGTCCATGGGACATATTTTCCAAAACTTTCCAGAC +
Preference number: 6 (lower is better)
Translates to: TGRESVSRRTRM*SMGHIFQNFPD
Trigger: GTCTGGAAAGTTTTGGAAAATATGTCCCATGGAGCACATTCTGGTTCGTCTGGAAACTGATTCTCGACCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472591.2
ENST00000491792.5
CDS CCA 72 bp GAGAATCAGTTTCCAGACGAACCAGAATGTGCTCCATaGGACATATTTTCCAAAACTTTCCAGACACCTCAC +
Preference number: 6 (lower is better)
Translates to: ENQFPDEPECAP*DIFSKTFQTPH
Trigger: GTGAGGTGTCTGGAAAGTTTTGGAAAATATGTCCCATGGAGCACATTCTGGTTCGTCTGGAAACTGATTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472591.2
ENST00000491792.5
CDS CAA 72 bp ATAAAGCATCTCTTCCACTCCCTGCCGAACTTTCTTTaGATGGTGAAAGTAACTCAGAACCTCCCGCACTTT +
Preference number: 6 (lower is better)
Translates to: IKHLFHSLPNFL*MVKVTQNLPHF
Trigger: AAAGTGCGGGAGGTTCTGAGTTACTTTCACCATCAAAAGAAAGTTCGGCAGGGAGTGGAAGAGATGCTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356309.8
ENST00000409339.3
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
ENST00000467785.5
CDS CAA 90 bp TTGAACAAATTGCAAAAACTCTCCAACCAGCTCCTTAGACACGGCTaGTACAAACGTCTCACGTTTTTCCATGACAGATGGCACTGTTCA +
Preference number: 6 (lower is better)
Translates to: LNKLQKLSNQLLRHG*YKRLTFFHDRWHCS
Trigger: TGAACAGTGCCATCTGTCATGGAAAAACGTGAGACGTTTGTACAAGCCGTGTCTAAGGAGCTGGTTGGAGAGTTTTTGCAATTTGTTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356309.8
ENST00000409339.3
ENST00000409423.5
ENST00000432615.5
CDS CCA 72 bp GGCTTGTACAAACGTCTCACGTTTTTCCATGACAGATaGCACTGTTCAAATGGCATTTATTTTGTAACCCTG +
Preference number: 6 (lower is better)
Translates to: GLYKRLTFFHDR*HCSNGIYFVTL
Trigger: CAGGGTTACAAAATAAATGCCATTTGAACAGTGCCATCTGTCATGGAAAAACGTGAGACGTTTGTACAAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356309.8
ENST00000409339.3
CDS CCA 72 bp CTTCAGAGTTTCTGGCCTTTAATCCTCTCCAAAGGATaGGCTTATATAATCTATAAAGCATCTCTTCCACTC +
Preference number: 6 (lower is better)
Translates to: LQSFWPLILSKG*AYIIYKASLPL
Trigger: GAGTGGAAGAGATGCTTTATAGATTATATAAGCCCATCCTTTGGAGAGGATTAAAGGCCAGAAACTCTGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356309.8
ENST00000409339.3
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
ENST00000467785.5
CDS CCA 72 bp GGCTTGTACAAACGTCTCACGTTTTTCCATGACAGATaGCACTGTTCAAATGGCATTTATTTTGTAACCCAT +
Preference number: 6 (lower is better)
Translates to: GLYKRLTFFHDR*HCSNGIYFVTH
Trigger: ATGGGTTACAAAATAAATGCCATTTGAACAGTGCCATCTGTCATGGAAAAACGTGAGACGTTTGTACAAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409423.5
CDS CCA 72 bp GGCTTGTACAAACGTCTCACGTTTTTCCATGACAGATaGCACTGTTCAAATGGCATTTATTTTGTAACCCTT +
Preference number: 6 (lower is better)
Translates to: GLYKRLTFFHDR*HCSNGIYFVTL
Trigger: AAGGGTTACAAAATAAATGCCATTTGAACAGTGCCATCTGTCATGGAAAAACGTGAGACGTTTGTACAAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432615.5
CDS CAA 72 bp TGGTTTTTAATGGTCCCGTGGATCATTTTGATGAAGTaGATATTCCAGTTGAAGAGACAACTAAGAAATCTT +
Preference number: 6 (lower is better)
Translates to: WFLMVPWIILMK*IFQLKRQLRNL
Trigger: AAGATTTCTTAGTTGTCTCTTCAACTGGAATATCAACTTCATCAAAATGATCCACGGGACCATTAAAAACCA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356309.8
ENST00000409339.3
ENST00000409423.5
ENST00000432615.5
ENST00000441982.5
ENST00000467785.5