RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NCAPD3 (Homo sapiens)

Ensembl gene IDs: ENSG00000151503

Ensembl transcript IDs: ENST00000525432.1, ENST00000525485.5, ENST00000525964.6, ENST00000526422.2, ENST00000526787.2, ENST00000527944.1, ENST00000528065.1, ENST00000530396.1, ENST00000532445.1, ENST00000533155.5, ENST00000534227.5, ENST00000534290.1, ENST00000534532.6, ENST00000534548.7

Found 1032 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCAGCTCCTGGGGTTGCGCCAGGCGCCCCCGCTCTAGCTCACTGTTaGCTCGCTGTCTGCCAGGAGGCCCTGCCATCCTTGGGCCCTGGC +
Preference number: 1 (lower is better)
Translates to: SAPGVAPGAPALAHC*LAVCQEALPSLGPG
Trigger: GCCAGGGCCCAAGGATGGCAGGGCCTCCTGGCAGACAGCGAGGCAACAGTGAGCTAGAGCGGGGGCGCCTGGCGCAACCCCAGGAGCTGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR GCA 90 bp GTTGCGCCAGGCGCCCCCGCTCTAGCTCACTGTTGCCTCGCTGTCTaGCAGGAGGCCCTGCCATCCTTGGGCCCTGGCAGTGGCTGTGTC +
Preference number: 1 (lower is better)
Translates to: VAPGAPALAHCCLAV*QEALPSLGPGSGCV
Trigger: GACACAGCCACTGCCAGGGCCCAAGGATGGCAGGGCCTCCTGGCAGACAGCGAGGCAACAGTGAGCTAGAGCGGGGGCGCCTGGCGCAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CCA 90 bp CTGCGCCTCTCCGCCACCGAGCCCACCTGTGTTGCGGTTCCCACTTaGGATGGCAGTGGGCAGATCTCAGTGGCATCCCATCCCCCAAAC +
Preference number: 1 (lower is better)
Translates to: LRLSATEPTCVAVPT*DGSGQISVASHPPN
Trigger: GTTTGGGGGATGGGATGCCACTGAGATCTGCCCACTGCCATCCCAAGTGGGAACCGCAACACAGGTGGGCTCGGTGGCGGAGAGGCGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CCA 90 bp CTGTTGCCTCGCTGTCTGCCAGGAGGCCCTGCCATCCTTGGGCCCTaGCAGTGGCTGTGTCCCAGTGAGCTTTACTCACGTGGCCCTTGC +
Preference number: 1 (lower is better)
Translates to: LLPRCLPGGPAILGP*QWLCPSELYSRGPC
Trigger: GCAAGGGCCACGTGAGTAAAGCTCACTGGGACACAGCCACTGCCAGGGCCCAAGGATGGCAGGGCCTCCTGGCAGACAGCGAGGCAACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR GCA 90 bp ACTGCGGGAAGTGATCCAGCTGCCTTCACACGGAGGACACGAGACTaGTTCCTCAAGGGCTCCTGCCTGCCTGGACACTGGTGGGAGGCG +
Preference number: 1 (lower is better)
Translates to: TAGSDPAAFTRRTRD*FLKGSCLPGHWWEA
Trigger: CGCCTCCCACCAGTGTCCAGGCAGGCAGGAGCCCTTGAGGAAGCAGTCTCGTGTCCTCCGTGTGAAGGCAGCTGGATCACTTCCCGCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525964.6
ENST00000534532.6
ENST00000534548.7
3UTR GCA 90 bp TGCCAGGCCCCTGAGGAGGAGCTCTCGTGTTCCACAGCAAAGCGCTaGCCAAGGACTGCGGGAAGTGATCCAGCTGCCTTCACACGGAGG +
Preference number: 1 (lower is better)
Translates to: CQAPEEELSCSTAKR*PRTAGSDPAAFTRR
Trigger: CCTCCGTGTGAAGGCAGCTGGATCACTTCCCGCAGTCCTTGGGCAGCGCTTTGCTGTGGAACACGAGAGCTCCTCCTCAGGGGCCTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534532.6
ENST00000534548.7
3UTR GCA 90 bp CTCAAGAGCAGTGCTGCGCCTCTCCGCCACCGAGCCCACCTGTGTTaGGGTTCCCACTTGGGATGGCAGTGGGCAGATCTCAGTGGCATC +
Preference number: 1 (lower is better)
Translates to: LKSSAAPLRHRAHLC*GSHLGWQWADLSGI
Trigger: GATGCCACTGAGATCTGCCCACTGCCATCCCAAGTGGGAACCGCAACACAGGTGGGCTCGGTGGCGGAGAGGCGCAGCACTGCTCTTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CCA 90 bp CCTCTCCGCCACCGAGCCCACCTGTGTTGCGGTTCCCACTTGGGATaGCAGTGGGCAGATCTCAGTGGCATCCCATCCCCCAAACCAACC +
Preference number: 1 (lower is better)
Translates to: PLRHRAHLCCGSHLG*QWADLSGIPSPKPT
Trigger: GGTTGGTTTGGGGGATGGGATGCCACTGAGATCTGCCCACTGCCATCCCAAGTGGGAACCGCAACACAGGTGGGCTCGGTGGCGGAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CCA 90 bp CCTCGCTGTCTGCCAGGAGGCCCTGCCATCCTTGGGCCCTGGCAGTaGCTGTGTCCCAGTGAGCTTTACTCACGTGGCCCTTGCTTCATC +
Preference number: 1 (lower is better)
Translates to: PRCLPGGPAILGPWQ*LCPSELYSRGPCFI
Trigger: GATGAAGCAAGGGCCACGTGAGTAAAGCTCACTGGGACACAGCCACTGCCAGGGCCCAAGGATGGCAGGGCCTCCTGGCAGACAGCGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR GCA 90 bp TGTACCCAGAGGCCACCCAGAAGCCCTCAGATGTACATACACAGATaGCAGTCAGCTCCTGGGGTTGCGCCAGGCGCCCCCGCTCTAGCT +
Preference number: 1 (lower is better)
Translates to: CTQRPPRSPQMYIHR*QSAPGVAPGAPALA
Trigger: AGCTAGAGCGGGGGCGCCTGGCGCAACCCCAGGAGCTGACTGGCATCTGTGTATGTACATCTGAGGGCTTCTGGGTGGCCTCTGGGTACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CCA 90 bp ACCCAGAAGCCCTCAGATGTACATACACAGATGCCAGTCAGCTCCTaGGGTTGCGCCAGGCGCCCCCGCTCTAGCTCACTGTTGCCTCGC +
Preference number: 1 (lower is better)
Translates to: TQKPSDVHTQMPVSS*GCARRPRSSSLLPR
Trigger: GCGAGGCAACAGTGAGCTAGAGCGGGGGCGCCTGGCGCAACCCCAGGAGCTGACTGGCATCTGTGTATGTACATCTGAGGGCTTCTGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR TCA 90 bp ATGGCCAGCACTTGCCCTGGGTGTGCAGGGCTGGCTCACGGCAGGTaGCATGGCAGGGTTTTCTTGGCCAGCAGGAACTGGCACTGTTTC +
Preference number: 1 (lower is better)
Translates to: MASTCPGCAGLAHGR*HGRVFLASRNWHCF
Trigger: GAAACAGTGCCAGTTCCTGCTGGCCAAGAAAACCCTGCCATGTCACCTGCCGTGAGCCAGCCCTGCACACCCAGGGCAAGTGCTGGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR GCA 90 bp CCCTGGCAGTGGCTGTGTCCCAGTGAGCTTTACTCACGTGGCCCTTaGTTCATCCAGCACAGCTCTCAGGTGGGCACTGCAGGGACACTG +
Preference number: 1 (lower is better)
Translates to: PWQWLCPSELYSRGP*FIQHSSQVGTAGTL
Trigger: CAGTGTCCCTGCAGTGCCCACCTGAGAGCTGTGCTGGATGAAGCAAGGGCCACGTGAGTAAAGCTCACTGGGACACAGCCACTGCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR GCA 90 bp AAGCCCTCAGATGTACATACACAGATGCCAGTCAGCTCCTGGGGTTaGGCCAGGCGCCCCCGCTCTAGCTCACTGTTGCCTCGCTGTCTG +
Preference number: 1 (lower is better)
Translates to: KPSDVHTQMPVSSWG*ARRPRSSSLLPRCL
Trigger: CAGACAGCGAGGCAACAGTGAGCTAGAGCGGGGGCGCCTGGCGCAACCCCAGGAGCTGACTGGCATCTGTGTATGTACATCTGAGGGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CCA 90 bp TCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTaGCGGGAGACCGCACATTCCACTGCTGAGGCTGTGGGGGCGGTT +
Preference number: 1 (lower is better)
Translates to: SFGGTSCCRLECLYS*RETAHSTAEAVGAV
Trigger: AACCGCCCCCACAGCCTCAGCAGTGGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR TCA 90 bp GCTCTCGTGTTCCACAGCAAAGCGCTGCCCAAGGACTGCGGGAAGTaGTCCAGCTGCCTTCACACGGAGGACACGAGACTGCTTCCTCAA +
Preference number: 1 (lower is better)
Translates to: ALVFHSKALPKDCGK*SSCLHTEDTRLLPQ
Trigger: TTGAGGAAGCAGTCTCGTGTCCTCCGTGTGAAGGCAGCTGGATCACTTCCCGCAGTCCTTGGGCAGCGCTTTGCTGTGGAACACGAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534532.6
ENST00000534548.7
3UTR GCA 90 bp CTCGAGGCTATGATGAAGGCAGCAGCATCAGGAATGGAGCGGGGCTaGCCTGAGACACCTCAGAGGCAGGACAGTGGTAGTGGGCATGAA +
Preference number: 1 (lower is better)
Translates to: LEAMMKAAASGMERG*PETPQRQDSGSGHE
Trigger: TTCATGCCCACTACCACTGTCCTGCCTCTGAGGTGTCTCAGGGCAGCCCCGCTCCATTCCTGATGCTGCTGCCTTCATCATAGCCTCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526422.2
3UTR CCA 90 bp CAGCACTTGCCCTGGGTGTGCAGGGCTGGCTCACGGCAGGTGACATaGCAGGGTTTTCTTGGCCAGCAGGAACTGGCACTGTTTCTAAAC +
Preference number: 1 (lower is better)
Translates to: QHLPWVCRAGSRQVT*QGFLGQQELALFLN
Trigger: GTTTAGAAACAGTGCCAGTTCCTGCTGGCCAAGAAAACCCTGCCATGTCACCTGCCGTGAGCCAGCCCTGCACACCCAGGGCAAGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR CCA 90 bp CTCTGCAATGGCCCTGTTTCAGGTGTAGGAGATGATACTGCTACATaGCCAGCACTTGCCCTGGGTGTGCAGGGCTGGCTCACGGCAGGT +
Preference number: 1 (lower is better)
Translates to: LCNGPVSGVGDDTAT*PALALGVQGWLTAG
Trigger: ACCTGCCGTGAGCCAGCCCTGCACACCCAGGGCAAGTGCTGGCCATGTAGCAGTATCATCTCCTACACCTGAAACAGGGCCATTGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR CCA 90 bp GGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTaGAGTGTCTTTATTCCTGGCGGGAGACCGCACATTCCACTGCTG +
Preference number: 1 (lower is better)
Translates to: GCFQRGLSEGPPAAG*SVFIPGGRPHIPLL
Trigger: CAGCAGTGGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR GCA 90 bp CAGCCACGTCCTCACACACCTCGAGCTCTCGCACCAGGGCTGGGATaGTCTTCTTTGCCAGATCCTCGTGCTGTAAGCACAGCTTACCTA +
Preference number: 1 (lower is better)
Translates to: QPRPHTPRALAPGLG*SSLPDPRAVSTAYL
Trigger: TAGGTAAGCTGTGCTTACAGCACGAGGATCTGGCAAAGAAGAGCATCCCAGCCCTGGTGCGAGAGCTCGAGGTGTGTGAGGACGTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR CCA 90 bp AGCTTTACTCACGTGGCCCTTGCTTCATCCAGCACAGCTCTCAGGTaGGCACTGCAGGGACACTGGTGTCTTCCATGTAGCGTCCCAGCT +
Preference number: 1 (lower is better)
Translates to: SFTHVALASSSTALR*ALQGHWCLPCSVPA
Trigger: AGCTGGGACGCTACATGGAAGACACCAGTGTCCCTGCAGTGCCCACCTGAGAGCTGTGCTGGATGAAGCAAGGGCCACGTGAGTAAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR TCA 90 bp TTTGGGCAGCAACCTCTGCAATGGCCCTGTTTCAGGTGTAGGAGATaGTACTGCTACATGGCCAGCACTTGCCCTGGGTGTGCAGGGCTG +
Preference number: 1 (lower is better)
Translates to: FGQQPLQWPCFRCRR*YCYMASTCPGCAGL
Trigger: CAGCCCTGCACACCCAGGGCAAGTGCTGGCCATGTAGCAGTATCATCTCCTACACCTGAAACAGGGCCATTGCAGAGGTTGCTGCCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR GCA 90 bp ACTCAAGCTGTTCCCCCATCATGGGAGCAGCCCTTAACAGAGGGCTaGACAAATCGGCAGTGCTGCTCTGGGGAAGGCTGCAAAGCCATT +
Preference number: 1 (lower is better)
Translates to: TQAVPPSWEQPLTEG*TNRQCCSGEGCKAI
Trigger: AATGGCTTTGCAGCCTTCCCCAGAGCAGCACTGCCGATTTGTGCAGCCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGCTTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CCA 90 bp CTTGCTTCATCCAGCACAGCTCTCAGGTGGGCACTGCAGGGACACTaGTGTCTTCCATGTAGCGTCCCAGCTTTGGGCTCCTGTAACAGA +
Preference number: 1 (lower is better)
Translates to: LASSSTALRWALQGH*CLPCSVPALGSCNR
Trigger: TCTGTTACAGGAGCCCAAAGCTGGGACGCTACATGGAAGACACCAGTGTCCCTGCAGTGCCCACCTGAGAGCTGTGCTGGATGAAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR TCA 90 bp GCCGTGCTGGACTCAGGACTGAAGTGCTGTAAAGCAAGGAGCTGCTaGGAAGGAGCACTCCACTGTGTGCCTGGAGAATGGCTCTCACTA +
Preference number: 1 (lower is better)
Translates to: AVLDSGLKCCKARSC*EGALHCVPGEWLSL
Trigger: TAGTGAGAGCCATTCTCCAGGCACACAGTGGAGTGCTCCTTCTCAGCAGCTCCTTGCTTTACAGCACTTCAGTCCTGAGTCCAGCACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR GCA 90 bp GCACCTCCAGCCGTCCCGGCCACATCTGCATGTTTTGCTAGCTCCTaGTCCTGGACCAGCTGTTCCTGGTACTTCTTCATGTCATACTCA +
Preference number: 1 (lower is better)
Translates to: APPAVPATSACFASS*SWTSCSWYFFMSYS
Trigger: TGAGTATGACATGAAGAAGTACCAGGAACAGCTGGTCCAGGAGCAGGAGCTAGCAAAACATGCAGATGTGGCCGGGACGGCTGGAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR GCA 90 bp TTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTaGAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATTCC +
Preference number: 1 (lower is better)
Translates to: FSWLFSEGSFGGTSC*RLECLYSWRETAHS
Trigger: GGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR GCA 90 bp CTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTaGTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACAT +
Preference number: 1 (lower is better)
Translates to: LFSWLFSEGSFGGTS*CRLECLYSWRETAH
Trigger: ATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR CCA 90 bp CCTGTGTTGCGGTTCCCACTTGGGATGGCAGTGGGCAGATCTCAGTaGCATCCCATCCCCCAAACCAACCAACGCACATCATCACTTTGT +
Preference number: 1 (lower is better)
Translates to: PVLRFPLGMAVGRSQ*HPIPQTNQRTSSLC
Trigger: ACAAAGTGATGATGTGCGTTGGTTGGTTTGGGGGATGGGATGCCACTGAGATCTGCCCACTGCCATCCCAAGTGGGAACCGCAACACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CCA 90 bp GGAAATGCTCCAGCAGTGGCTCAGTGCTCCCTGGTGTCTGCTGCATaGCATCCTGGATGCTTAGCATGCAAGTTCCCTCCATCATTGCCA +
Preference number: 1 (lower is better)
Translates to: GNAPAVAQCSLVSAA*HPGCLACKFPPSLP
Trigger: TGGCAATGATGGAGGGAACTTGCATGCTAAGCATCCAGGATGCCATGCAGCAGACACCAGGGAGCACTGAGCCACTGCTGGAGCATTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR TCA 90 bp CTAAGCTCCGACTCCGATGCCTGCTCTTTGACTCCACGGCTTTCTTaGCAGAATTCAGGATTGCAATGGTGCTCAGGGACATGGGCCTGG +
Preference number: 1 (lower is better)
Translates to: LSSDSDACSLTPRLS*QNSGLQWCSGTWAW
Trigger: CCAGGCCCATGTCCCTGAGCACCATTGCAATCCTGAATTCTGTCAAGAAAGCCGTGGAGTCAAAGAGCAGGCATCGGAGTCGGAGCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR GCA 90 bp TCACTGATGCTCTTCTCGGGGGTGCTGATGGCCCGCTTGGTCACGTaGTCAATCTCGCCATTCGACTCTTGCTCCAAACTGTATGAAGAC +
Preference number: 1 (lower is better)
Translates to: SLMLFSGVLMARLVT*SISPFDSCSKLYED
Trigger: GTCTTCATACAGTTTGGAGCAAGAGTCGAATGGCGAGATTGAGCACGTGACCAAGCGGGCCATCAGCACCCCCGAGAAGAGCATCAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR GCA 90 bp CTCAGAAGCCTGTGTTCTTCAAGAGCAGGTGTTCTCAGCCTCACATaGCCTGCCGTGCTGGACTCAGGACTGAAGTGCTGTAAAGCAAGG +
Preference number: 1 (lower is better)
Translates to: LRSLCSSRAGVLSLT*PAVLDSGLKCCKAR
Trigger: CCTTGCTTTACAGCACTTCAGTCCTGAGTCCAGCACGGCAGGGCATGTGAGGCTGAGAACACCTGCTCTTGAAGAACACAGGCTTCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CCA 90 bp TACCCACTAGTGCTAACAGAAGAGACTCAAGCTGTTCCCCCATCATaGGAGCAGCCCTTAACAGAGGGCTGCACAAATCGGCAGTGCTGC +
Preference number: 1 (lower is better)
Translates to: YPLVLTEETQAVPPS*EQPLTEGCTNRQCC
Trigger: GCAGCACTGCCGATTTGTGCAGCCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTTAGCACTAGTGGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR TCA 90 bp AAGCACCCAGACGCCACAGGCTCTGTCGCATTTCAAAACAAACCATaGTGGAGTGGCGGCCAGTCCAGCCTTTTAAAGAACGTCAGGTGG +
Preference number: 1 (lower is better)
Translates to: KHPDATGSVAFQNKP*WSGGQSSLLKNVRW
Trigger: CCACCTGACGTTCTTTAAAAGGCTGGACTGGCCGCCACTCCATCATGGTTTGTTTTGAAATGCGACAGAGCCTGTGGCGTCTGGGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR GCA 90 bp ATATTCCCTGTTCCATTCTCCTTGAGAACGATGTTGGAGAGGCGGTaGTCGCAGGTGGAGAGTACATCCCCACACACCTGCGTCAGCAAT +
Preference number: 1 (lower is better)
Translates to: IFPVPFSLRTMLERR*SQVESTSPHTCVSN
Trigger: ATTGCTGACGCAGGTGTGTGGGGATGTACTCTCCACCTGCGAGCACCGCCTCTCCAACATCGTTCTCAAGGAGAATGGAACAGGGAATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR CCA 90 bp AGACGCCACAGGCTCTGTCGCATTTCAAAACAAACCATGATGGAGTaGCGGCCAGTCCAGCCTTTTAAAGAACGTCAGGTGGAGCAGCCA +
Preference number: 1 (lower is better)
Translates to: RRHRLCRISKQTMME*RPVQPFKERQVEQP
Trigger: TGGCTGCTCCACCTGACGTTCTTTAAAAGGCTGGACTGGCCGCCACTCCATCATGGTTTGTTTTGAAATGCGACAGAGCCTGTGGCGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CCA 90 bp GGGCACTGCAGGGACACTGGTGTCTTCCATGTAGCGTCCCAGCTTTaGGCTCCTGTAACAGACCTCTTTTTGGTTATGGATGGCTCACAA +
Preference number: 1 (lower is better)
Translates to: GHCRDTGVFHVASQL*APVTDLFLVMDGSQ
Trigger: TTGTGAGCCATCCATAACCAAAAAGAGGTCTGTTACAGGAGCCCAAAGCTGGGACGCTACATGGAAGACACCAGTGTCCCTGCAGTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR GCA 90 bp AGTGCTGTAAAGCAAGGAGCTGCTGAGAAGGAGCACTCCACTGTGTaGCTGGAGAATGGCTCTCACTACTCACCTTGTCTTTCAGCTTCC +
Preference number: 1 (lower is better)
Translates to: SAVKQGAAEKEHSTV*LENGSHYSPCLSAS
Trigger: GGAAGCTGAAAGACAAGGTGAGTAGTGAGAGCCATTCTCCAGGCACACAGTGGAGTGCTCCTTCTCAGCAGCTCCTTGCTTTACAGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR TCA 90 bp ACTTCACCAACAGGTCTTCGTCCATATTCCCTGTTCCATTCTCCTTaGGAACGATGTTGGAGAGGCGGTGCTCGCAGGTGGAGAGTACAT +
Preference number: 1 (lower is better)
Translates to: TSPTGLRPYSLFHSP*ERCWRGGARRWRVH
Trigger: ATGTACTCTCCACCTGCGAGCACCGCCTCTCCAACATCGTTCTCAAGGAGAATGGAACAGGGAATATGGACGAAGACCTGTTGGTGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR TCA 90 bp CAAAAGAAACCTCTCAGGTTAGCTTTGAACTGCCTCTTCCTGAGATaGCTAGGACAGTCTGTACCCAGAGGCCACCCAGAAGCCCTCAGA +
Preference number: 1 (lower is better)
Translates to: QKKPLRLALNCLFLR*LGQSVPRGHPEALR
Trigger: TCTGAGGGCTTCTGGGTGGCCTCTGGGTACAGACTGTCCTAGTCATCTCAGGAAGAGGCAGTTCAAAGCTAACCTGAGAGGTTTCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR TCA 90 bp ACTCCCCGAAGCTGGCAATGTCTGGGTGTGAATCGATCAGAGTGCTaGCAAATCGGAAGAACAGGGAGCCCTTCCATTTCACAAATTCCT +
Preference number: 1 (lower is better)
Translates to: TPRSWQCLGVNRSEC*QIGRTGSPSISQIP
Trigger: AGGAATTTGTGAAATGGAAGGGCTCCCTGTTCTTCCGATTTGTCAGCACTCTGATCGATTCACACCCAGACATTGCCAGCTTCGGGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR TCA 90 bp GGGGGCGGTTTATCAGGCAGTGATAAACATAAGATGTCATTTCCTTaGCTCCGGCCTTCAATTTTCTCTTTGGCTGACGACGGAGTCCGT +
Preference number: 1 (lower is better)
Translates to: GGGLSGSDKHKMSFP*LRPSIFSLADDGVR
Trigger: ACGGACTCCGTCGTCAGCCAAAGAGAAAATTGAAGGCCGGAGTCAAGGAAATGACATCTTATGTTTATCACTGCCTGATAAACCGCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR CCA 90 bp ACATCTGCATGTTTTGCTAGCTCCTGCTCCTGGACCAGCTGTTCCTaGTACTTCTTCATGTCATACTCAAGCTCTGATGCCAGCTGTTTG +
Preference number: 1 (lower is better)
Translates to: TSACFASSCSWTSCS*YFFMSYSSSDASCL
Trigger: CAAACAGCTGGCATCAGAGCTTGAGTATGACATGAAGAAGTACCAGGAACAGCTGGTCCAGGAGCAGGAGCTAGCAAAACATGCAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR GCA 90 bp CCAGAATTTAAAGTGAAAGGCAGCACTCCTAAGCTCCGACTCCGATaGCTGCTCTTTGACTCCACGGCTTTCTTGACAGAATTCAGGATT +
Preference number: 1 (lower is better)
Translates to: PEFKVKGSTPKLRLR*LLFDSTAFLTEFRI
Trigger: AATCCTGAATTCTGTCAAGAAAGCCGTGGAGTCAAAGAGCAGGCATCGGAGTCGGAGCTTAGGAGTGCTGCCTTTCACTTTAAATTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR GCA 90 bp TTCACAAATTCCTCCTGCAAGAGATTGGTAAGCAAGATGAGTGTCTaGTTCCGGATGAATGGGTCGGAATCCTTCAGACACATGGAGATG +
Preference number: 1 (lower is better)
Translates to: FTNSSCKRLVSKMSV*FRMNGSESFRHMEM
Trigger: CATCTCCATGTGTCTGAAGGATTCCGACCCATTCATCCGGAAGCAGACACTCATCTTGCTTACCAATCTCTTGCAGGAGGAATTTGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR CCA 90 bp ATCCTGCATCACCTCCCTGAGATAGTGCATGAGTTCCCGCAAAGCTaGGATCTTATTTTTCTCCAGCACAGTCTTCAGGGAGATGATAAT +
Preference number: 1 (lower is better)
Translates to: ILHHLPEIVHEFPQS*DLIFLQHSLQGDDN
Trigger: ATTATCATCTCCCTGAAGACTGTGCTGGAGAAAAATAAGATCCCAGCTTTGCGGGAACTCATGCACTATCTCAGGGAGGTGATGCAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR TCA 90 bp TTAAGATATGAATGTGACTCAAGACTCGAGGCCGATACGAGGCTGTaGTTCTGCCTTTGGATGGATGTTGCTGTACACAGATGCTACAGA +
Preference number: 1 (lower is better)
Translates to: LRYECDSRLEADTRL*FCLWMDVAVHRCYR
Trigger: TCTGTAGCATCTGTGTACAGCAACATCCATCCAAAGGCAGAATCACAGCCTCGTATCGGCCTCGAGTCTTGAGTCACATTCATATCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CCA 90 bp TTTGACTTTAAATTTTTCATCCGCCGGAGACACTGCTCCCATTTGTaGGGGGACATTAGCAACATCACTCAGAAGCCTGTGTTCTTCAAG +
Preference number: 1 (lower is better)
Translates to: FDFKFFIRRRHCSHL*GDISNITQKPVFFK
Trigger: CTTGAAGAACACAGGCTTCTGAGTGATGTTGCTAATGTCCCCCCACAAATGGGAGCAGTGTCTCCGGCGGATGAAAAATTTAAAGTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CCA 90 bp TATTTGCTCTTACGTTGGGTTTGTCTCTTCTTCCTAGCATTTCAGTaGTTAGGCATGCACACTAAAAATGCTATCAATCACCCATCCACC +
Preference number: 1 (lower is better)
Translates to: YLLLRWVCLFFLAFQ*LGMHTKNAINHPST
Trigger: GGTGGATGGGTGATTGATAGCATTTTTAGTGTGCATGCCTAACCACTGAAATGCTAGGAAGAAGAGACAAACCCAACGTAAGAGCAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CAA 90 bp GTCAGCTCCTGGGGTTGCGCCAGGCGCCCCCGCTCTAGCTCACTGTaGCCTCGCTGTCTGCCAGGAGGCCCTGCCATCCTTGGGCCCTGG +
Preference number: 2 (lower is better)
Translates to: VSSWGCARRPRSSSL*PRCLPGGPAILGPW
Trigger: CCAGGGCCCAAGGATGGCAGGGCCTCCTGGCAGACAGCGAGGCAACAGTGAGCTAGAGCGGGGGCGCCTGGCGCAACCCCAGGAGCTGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CAA 90 bp GCTGCGCCTCTCCGCCACCGAGCCCACCTGTGTTGCGGTTCCCACTaGGGATGGCAGTGGGCAGATCTCAGTGGCATCCCATCCCCCAAA +
Preference number: 2 (lower is better)
Translates to: AAPLRHRAHLCCGSH*GWQWADLSGIPSPK
Trigger: TTTGGGGGATGGGATGCCACTGAGATCTGCCCACTGCCATCCCAAGTGGGAACCGCAACACAGGTGGGCTCGGTGGCGGAGAGGCGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR-3UTR CCA 90 bp GCGCCTCTCCGCCACCGAGCCCACCTGTGTTGCGGTTCCCACTTGGGATGGCAGTCGGCAGTGCTGCTCTaGGGAAGGCTGCAAAGCCAT +
Preference number: 2 (lower is better)
Translates to: APLRHRAHLCCGSHLGWQSAVLL*GRLQSH
Trigger: ATGGCTTTGCAGCCTTCCCCAGAGCAGCACTGCCGA...CTGCCATCCCAAGTGGGAACCGCAACACAGGTGGGCTCGGTGGCGGAGAGGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CAA 90 bp GCTCAAGAGCAGTGCTGCGCCTCTCCGCCACCGAGCCCACCTGTGTaGCGGTTCCCACTTGGGATGGCAGTGGGCAGATCTCAGTGGCAT +
Preference number: 2 (lower is better)
Translates to: AQEQCCASPPPSPPV*RFPLGMAVGRSQWH
Trigger: ATGCCACTGAGATCTGCCCACTGCCATCCCAAGTGGGAACCGCAACACAGGTGGGCTCGGTGGCGGAGAGGCGCAGCACTGCTCTTGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR-3UTR CCA 90 bp CAGCCGTCCCGGCCACATCTGCATGTTTTGCTAGCTCCTGCTCCTGGACCAGCTGGGTGGCTGAGACGCTaGGGCCTCACTGCTGCCTTG +
Preference number: 2 (lower is better)
Translates to: QPSRPHLHVLLAPAPGPAGWLRR*GLTAAL
Trigger: CAAGGCAGCAGTGAGGCCCCAGCGTCTCAGCCACCC...AGCTGGTCCAGGAGCAGGAGCTAGCAAAACATGCAGATGTGGCCGGGACGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR-3UTR CCA 90 bp CTTGGGCCCTGGCAGTGGCTGTGTCCCAGTGAGCTTTACTCACGTGGCCCTTGCCCCCACCCTCAGCGTTaGGGATTCACGCTCCAGCCT +
Preference number: 2 (lower is better)
Translates to: LGPWQWLCPSELYSRGPCPHPQR*GFTLQP
Trigger: AGGCTGGAGCGTGAATCCCCAACGCTGAGGGTGGGG...GCAAGGGCCACGTGAGTAAAGCTCACTGGGACACAGCCACTGCCAGGGCCCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR-3UTR TCA 90 bp GCGCCTCTCCGCCACCGAGCCCACCTGTGTTGCGGTTCCCACTTGGGATGGCAGCTGCCTGGGCACAGATaGACTGCCCTTCAAGACAAT +
Preference number: 2 (lower is better)
Translates to: APLRHRAHLCCGSHLGWQLPGHR*TALQDN
Trigger: ATTGTCTTGAAGGGCAGTTCATCTGTGCCCAGGCAG...CTGCCATCCCAAGTGGGAACCGCAACACAGGTGGGCTCGGTGGCGGAGAGGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR-3UTR GCA 90 bp TCGTGTTCCACAGCAAAGCGCTGCCCAAGGACTGCGGGAAGTGATCCAGCTGCCGGAGGTCAGCCTGTGTaGTCAAGAGCAGTGCTGCGC +
Preference number: 2 (lower is better)
Translates to: SCSTAKRCPRTAGSDPAAGGQPV*SRAVLR
Trigger: GCGCAGCACTGCTCTTGAGCACACAGGCTGACCTCC...GGCAGCTGGATCACTTCCCGCAGTCCTTGGGCAGCGCTTTGCTGTGGAACACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR-3UTR CCA 90 bp GGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGTGCGCTTCTCCACCCTaGCTGGACACAGCTGGGCTA +
Preference number: 2 (lower is better)
Translates to: GVFRRDLLLQAGVSLFLACASPP*LDTAGL
Trigger: TAGCCCAGCTGTGTCCAGCCAGGGTGGAGAAGCGCA...CGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR-3UTR CCA 90 bp AGGGATGGCTCCCCACCCTCAGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGGCTGTTCCCCCATCATaGGAGCAGCCCTTAACAGAG +
Preference number: 2 (lower is better)
Translates to: RDGSPPSALGIHAPASFLAVPPS*EQPLTE
Trigger: CTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGC...CAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCTGAGGGTGGGGAGCCATCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CAA 90 bp GTGCCACCTCAGCACCTCCAGCCGTCCCGGCCACATCTGCATGTTTaGCTAGCTCCTGCTCCTGGACCAGCTGTTCCTGGTACTTCTTCA +
Preference number: 2 (lower is better)
Translates to: VPPQHLQPSRPHLHV*LAPAPGPAVPGTSS
Trigger: TGAAGAAGTACCAGGAACAGCTGGTCCAGGAGCAGGAGCTAGCAAAACATGCAGATGTGGCCGGGACGGCTGGAGGTGCTGAGGTGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR-3UTR TCA 90 bp GCTCAGGGACATGGGCCTGGCTTTGGGCAGCAACCTCTGCAATGGCCCTGTTTCGAAGCCAGGACGGACTaGATCAGAAGGAAGATGCGC +
Preference number: 2 (lower is better)
Translates to: AQGHGPGFGQQPLQWPCFEARTD*IRRKMR
Trigger: GCGCATCTTCCTTCTGATTCAGTCCGTCCTGGCTTC...GAAACAGGGCCATTGCAGAGGTTGCTGCCCAAAGCCAGGCCCATGTCCCTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR-3UTR TCA 90 bp CCACCTGTGTTGCGGTTCCCACTTGGGATGGCAGTGGGCAGATCTCAGTGGCATAAGGACTGCGGGAAGTaGTCCAGCTGCCTTCACACG +
Preference number: 2 (lower is better)
Translates to: PPVLRFPLGMAVGRSQWHKDCGK*SSCLHT
Trigger: CGTGTGAAGGCAGCTGGATCACTTCCCGCAGTCCTT...ATGCCACTGAGATCTGCCCACTGCCATCCCAAGTGGGAACCGCAACACAGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR-3UTR GCA 90 bp CTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGAACGCTGGGGCCTCACTaGTGCCTTGAGATGATGGTG +
Preference number: 2 (lower is better)
Translates to: LSEGPPAAGWSVFIPGGRTLGPH*CLEMMV
Trigger: CACCATCATCTCAAGGCAGCAGTGAGGCCCCAGCGT...TCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR-3UTR GCA 90 bp GCTGTTCCCCCATCATGGGAGCAGCCCTTAACAGAGGGCTGCACAAATCGGCAGTCCACAGCAAAGCGCTaGCCAAGGACTGCGGGAAGT +
Preference number: 2 (lower is better)
Translates to: AVPPSWEQPLTEGCTNRQSTAKR*PRTAGS
Trigger: ACTTCCCGCAGTCCTTGGGCAGCGCTTTGCTGTGGA...CTGCCGATTTGTGCAGCCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR-3UTR GCA 90 bp CTTGGGCCCTGGCAGTGGCTGTGTCCCAGTGAGCTTTACTCACGTGGCCCTTGCACAAATCGGCAGTGCTaGTCTGGGGAAGGCTGCAAA +
Preference number: 2 (lower is better)
Translates to: LGPWQWLCPSELYSRGPCTNRQC*SGEGCK
Trigger: TTTGCAGCCTTCCCCAGAGCAGCACTGCCGATTTGT...GCAAGGGCCACGTGAGTAAAGCTCACTGGGACACAGCCACTGCCAGGGCCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR-3UTR CCA 90 bp ACTGGTGTCTTCCATGTAGCGTCCCAGCTTTGGGCTCCTGTAACAGACCTCTTTGGGCTCCTGCCTGCCTaGACACTGGTGGGAGGCGCT +
Preference number: 2 (lower is better)
Translates to: TGVFHVASQLWAPVTDLFGLLPA*TLVGGA
Trigger: AGCGCCTCCCACCAGTGTCCAGGCAGGCAGGAGCCC...AAAGAGGTCTGTTACAGGAGCCCAAAGCTGGGACGCTACATGGAAGACACCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR-3UTR TCA 90 bp GGGAGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTAAGGACTGCGGGAAGTaGTCCAGCTGCCTTCACACG +
Preference number: 2 (lower is better)
Translates to: GRRCLVGCFQRGLSEGPPKDCGK*SSCLHT
Trigger: CGTGTGAAGGCAGCTGGATCACTTCCCGCAGTCCTT...AGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534532.6
3UTR-3UTR GCA 90 bp GTGTGCTCAAGAGCAGTGCTGCGCCTCTCCGCCACCGAGCCCACCTGTGTTGCGTGGGCACAGATGAACTaGCCTTCAAGACAATCATCT +
Preference number: 2 (lower is better)
Translates to: VCSRAVLRLSATEPTCVAWAQMN*PSRQSS
Trigger: AGATGATTGTCTTGAAGGGCAGTTCATCTGTGCCCA...CGCAACACAGGTGGGCTCGGTGGCGGAGAGGCGCAGCACTGCTCTTGAGCACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR-3UTR CCA 90 bp TGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATTCCACTGCTGAGCTCTCGCACCAGGGCTaGGATGCTCTTCTTTGCCAG +
Preference number: 2 (lower is better)
Translates to: CRLECLYSWRETAHSTAELSHQG*DALLCQ
Trigger: CTGGCAAAGAAGAGCATCCCAGCCCTGGTGCGAGAG...CTCAGCAGTGGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR-3UTR CCA 90 bp CTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACTGAGAGTAACTCACTaGCGTCCAGGTCCAGGGGTA +
Preference number: 2 (lower is better)
Translates to: LSEGPPAAGWSVFIPGGRLRVTH*RPGPGV
Trigger: TACCCCTGGACCTGGACGCCAGTGAGTTACTCTCAG...TCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR-3UTR CCA 90 bp GAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGACATGGGCCTGGCTTTaGGCAGCAACCTCTGCAATG +
Preference number: 2 (lower is better)
Translates to: EGSFGGTSCCRLECLYSWTWAWL*AATSAM
Trigger: CATTGCAGAGGTTGCTGCCCAAAGCCAGGCCCATGT...CCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR-3UTR CCA 90 bp GTTCCTCTTTGCCACAGAGAAAGCACCCAGACGCCACAGGCTCTGTCGCATTTCCACACCGCCTCTGCCTaGGCACAGATGAACTGCCCT +
Preference number: 2 (lower is better)
Translates to: VPLCHRESTQTPQALSHFHTASA*AQMNCP
Trigger: AGGGCAGTTCATCTGTGCCCAGGCAGAGGCGGTGTG...GAAATGCGACAGAGCCTGTGGCGTCTGGGTGCTTTCTCTGTGGCAAAGAGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR-3UTR TCA 90 bp TCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGCCGCTTCTCTCTCTCTaGCTGGGGGAACTTGTTGTA +
Preference number: 2 (lower is better)
Translates to: SFGGTSCCRLECLYSWREPLLSL*LGELVV
Trigger: TACAACAAGTTCCCCCAGTCAGAGAGAGAGAAGCGG...CTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR-3UTR GCA 90 bp GGGAGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTATGTTGGAGAGGCGGTaGTCGCAGGTGGAGAGTACA +
Preference number: 2 (lower is better)
Translates to: GRRCLVGCFQRGLSEGPPMLERR*SQVEST
Trigger: TGTACTCTCCACCTGCGAGCACCGCCTCTCCAACAT...AGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR-3UTR GCA 90 bp GAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGGAATCAGAAGGAAGATaGGCTTCTCCACCCTGGCTG +
Preference number: 2 (lower is better)
Translates to: EGSFGGTSCCRLECLYSWESEGR*ASPPWL
Trigger: CAGCCAGGGTGGAGAAGCGCATCTTCCTTCTGATTC...CCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR-3UTR GCA 90 bp CCTCCAGCCGTCCCGGCCACATCTGCATGTTTTGCTAGCTCCTGCTCCTGGACCTTTGCCAGATCCTCGTaGTGTAAGCACAGCTTACCT +
Preference number: 2 (lower is better)
Translates to: PPAVPATSACFASSCSWTFARSS*CKHSLP
Trigger: AGGTAAGCTGTGCTTACAGCACGAGGATCTGGCAAA...GGTCCAGGAGCAGGAGCTAGCAAAACATGCAGATGTGGCCGGGACGGCTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR-3UTR GCA 90 bp GAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGTGTTTTGCTAGCTCCTaGTCCTGGACCAGCTGTTCC +
Preference number: 2 (lower is better)
Translates to: EGSFGGTSCCRLECLYSWCFASS*SWTSCS
Trigger: GGAACAGCTGGTCCAGGAGCAGGAGCTAGCAAAACA...CCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR-3UTR GCA 90 bp TGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCGCCCGCTTGGTCACGTaGTCAATCTCGCCATTCGAC +
Preference number: 2 (lower is better)
Translates to: CLVGCFQRGLSEGPPAAGARLVT*SISPFD
Trigger: GTCGAATGGCGAGATTGAGCACGTGACCAAGCGGGC...GCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR-3UTR GCA 90 bp CCCACTAGTGCTAACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCTGCACAAATCGGCAGTaGTGCTCTGGGGAAGGCTGC +
Preference number: 2 (lower is better)
Translates to: PTSANRRDSSCSPIMGAACTNRQ*CSGEGC
Trigger: GCAGCCTTCCCCAGAGCAGCACTGCCGATTTGTGCA...GGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTTAGCACTAGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR-3UTR CCA 90 bp TGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCGCTAGCTCCTGCTCCTaGACCAGCTGTTCCTGGTAC +
Preference number: 2 (lower is better)
Translates to: CLVGCFQRGLSEGPPAAGASSCS*TSCSWY
Trigger: GTACCAGGAACAGCTGGTCCAGGAGCAGGAGCTAGC...GCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR-3UTR CCA 90 bp TCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGCAGCAACCTCTGCAATaGCCCTGTTTCAGGTGTAGG +
Preference number: 2 (lower is better)
Translates to: SFGGTSCCRLECLYSWREQQPLQ*PCFRCR
Trigger: CCTACACCTGAAACAGGGCCATTGCAGAGGTTGCTG...CTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR-3UTR CCA 90 bp TGGCGGCCAGTCCAGCCTTTTAAAGAACGTCAGGTGGAGCAGCCAGGTGAAAGGGGTTCCCACTTGGGATaGCAGTGGGCAGATCTCAGT +
Preference number: 2 (lower is better)
Translates to: WRPVQPFKERQVEQPGERGSHLG*QWADLS
Trigger: ACTGAGATCTGCCCACTGCCATCCCAAGTGGGAACC...CCTTTCACCTGGCTGCTCCACCTGACGTTCTTTAAAAGGCTGGACTGGCCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CAA 90 bp AACGTGACATCACTGATGCTCTTCTCGGGGGTGCTGATGGCCCGCTaGGTCACGTGCTCAATCTCGCCATTCGACTCTTGCTCCAAACTG +
Preference number: 2 (lower is better)
Translates to: NVTSLMLFSGVLMAR*VTCSISPFDSCSKL
Trigger: CAGTTTGGAGCAAGAGTCGAATGGCGAGATTGAGCACGTGACCAAGCGGGCCATCAGCACCCCCGAGAAGAGCATCAGTGATGTCACGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR-3UTR GCA 90 bp GTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTACTGGGGCCTCACTGCTaGCTTGAGATGATGGTGAGT +
Preference number: 2 (lower is better)
Translates to: VFRGVFRRDLLLQAGVSLLGPHC*LEMMVS
Trigger: ACTCACCATCATCTCAAGGCAGCAGTGAGGCCCCAG...TAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR-3UTR CCA 90 bp TCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGAATTCAGGATTGCAATaGTGCTCAGGGACATGGGCC +
Preference number: 2 (lower is better)
Translates to: SFGGTSCCRLECLYSWRENSGLQ*CSGTWA
Trigger: GGCCCATGTCCCTGAGCACCATTGCAATCCTGAATT...CTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR-3UTR CCA 90 bp AGGGATGGCTCCCCACCCTCAGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGTCTACACTAGTGCCATaGGAACCAGGTCTGAAAAAG +
Preference number: 2 (lower is better)
Translates to: RDGSPPSALGIHAPASFLSTLVP*EPGLKK
Trigger: CTTTTTCAGACCTGGTTCCCATGGCACTAGTGTAGA...CAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCTGAGGGTGGGGAGCCATCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR-3UTR CCA 90 bp ATGGAGTGGCGGCCAGTCCAGCCTTTTAAAGAACGTCAGGTGGAGCAGCCAGGTCTGGTGTCTGCTGCATaGCATCCTGGATGCTTAGCA +
Preference number: 2 (lower is better)
Translates to: MEWRPVQPFKERQVEQPGLVSAA*HPGCLA
Trigger: TGCTAAGCATCCAGGATGCCATGCAGCAGACACCAG...ACCTGGCTGCTCCACCTGACGTTCTTTAAAAGGCTGGACTGGCCGCCACTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CAA 90 bp AGGTCTTCGTCCATATTCCCTGTTCCATTCTCCTTGAGAACGATGTaGGAGAGGCGGTGCTCGCAGGTGGAGAGTACATCCCCACACACC +
Preference number: 2 (lower is better)
Translates to: RSSSIFPVPFSLRTM*ERRCSQVESTSPHT
Trigger: GGTGTGTGGGGATGTACTCTCCACCTGCGAGCACCGCCTCTCCAACATCGTTCTCAAGGAGAATGGAACAGGGAATATGGACGAAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR CAA 90 bp CCTAAGCTCCGACTCCGATGCCTGCTCTTTGACTCCACGGCTTTCTaGACAGAATTCAGGATTGCAATGGTGCTCAGGGACATGGGCCTG +
Preference number: 2 (lower is better)
Translates to: PKLRLRCLLFDSTAF*TEFRIAMVLRDMGL
Trigger: CAGGCCCATGTCCCTGAGCACCATTGCAATCCTGAATTCTGTCAAGAAAGCCGTGGAGTCAAAGAGCAGGCATCGGAGTCGGAGCTTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR CAA 90 bp ATCATTGCCACCTTGGTAGAGAGGGATGGCTCCCCACCCTCAGCGTaGGGGATTCACGCTCCAGCCTCCTTCTTGGTTGTCATAGTGATA +
Preference number: 2 (lower is better)
Translates to: IIATLVERDGSPPSA*GIHAPASFLVVIVI
Trigger: TATCACTATGACAACCAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCTGAGGGTGGGGAGCCATCCCTCTCTACCAAGGTGGCAATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR-3UTR TCA 90 bp TCAAACGTGTCTGAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATGCCAGTGTCTGCTTCCGGATaGATGGGTCGGAATCCTTCA +
Preference number: 2 (lower is better)
Translates to: SNVSESNSLASRSRGRMPVSASG*MGRNPS
Trigger: TGAAGGATTCCGACCCATTCATCCGGAAGCAGACAC...TGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTCAGACACGTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR-3UTR TCA 90 bp TCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGAAGCTTGATCTCCTTTaGGCTGAGGACCTCAAACGT +
Preference number: 2 (lower is better)
Translates to: SFGGTSCCRLECLYSWREKLDLL*AEDLKR
Trigger: ACGTTTGAGGTCCTCAGCTCAAAGGAGATCAAGCTT...CTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR-3UTR TCA 90 bp GAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGGAGATGAGCTTCTTCTaGGCTTCCTGCATGACTACA +
Preference number: 2 (lower is better)
Translates to: EGSFGGTSCCRLECLYSWEMSFF*ASCMTT
Trigger: TGTAGTCATGCAGGAAGCTCAGAAGAAGCTCATCTC...CCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR-3UTR TCA 90 bp TCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATTCCACTTTCAGGTGTAGGAGATaGTACTGCTACATGGCCAGC +
Preference number: 2 (lower is better)
Translates to: SCCRLECLYSWRETAHSTFRCRR*YCYMAS
Trigger: GCTGGCCATGTAGCAGTATCATCTCCTACACCTGAA...AGTGGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR-3UTR GCA 90 bp CTGCAATTGCTCGAGGCTATGATGAAGGCAGCAGCATCAGGAATGGAGCGGGGCAAGGGGAAGCAGAAATaGCATGACTCCTGGGTTGGT +
Preference number: 2 (lower is better)
Translates to: LQLLEAMMKAAASGMERGKGKQK*HDSWVG
Trigger: ACCAACCCAGGAGTCATGGCATTTCTGCTTCCCCTT...GCCCCGCTCCATTCCTGATGCTGCTGCCTTCATCATAGCCTCGAGCAATTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526422.2
3UTR-3UTR GCA 90 bp AAAGTCGTTCTGCAAAAGTGTGGGGGATGGGCTGGCACAGTTAACATCAGAAAGGGAATGGAGCGGGGCTaGCCTGAGACACCTCAGAGG +
Preference number: 2 (lower is better)
Translates to: KVVLQKCGGWAGTVNIRKGMERG*PETPQR
Trigger: CCTCTGAGGTGTCTCAGGGCAGCCCCGCTCCATTCC...CTTTCTGATGTTAACTGTGCCAGCCCATCCCCCACACTTTTGCAGAACGACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526422.2
3UTR CAA 90 bp TGGGCACTGCAGGGACACTGGTGTCTTCCATGTAGCGTCCCAGCTTaGGGCTCCTGTAACAGACCTCTTTTTGGTTATGGATGGCTCACA +
Preference number: 2 (lower is better)
Translates to: WALQGHWCLPCSVPA*GSCNRPLFGYGWLT
Trigger: TGTGAGCCATCCATAACCAAAAAGAGGTCTGTTACAGGAGCCCAAAGCTGGGACGCTACATGGAAGACACCAGTGTCCCTGCAGTGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CAA 90 bp GGTAGTGGGCATGAAAGGGGAAGCAGAAATGCCATGACTCCTGGGTaGGTGGCTTGGATGGTGCCATTAGCAGGCTTTGGGAATCCCATT +
Preference number: 2 (lower is better)
Translates to: GSGHERGSRNAMTPG*VAWMVPLAGFGNPI
Trigger: AATGGGATTCCCAAAGCCTGCTAATGGCACCATCCAAGCCACCAACCCAGGAGTCATGGCATTTCTGCTTCCCCTTTCATGCCCACTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526422.2
3UTR-3UTR GCA 90 bp GTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTAAGCAAGATGAGTGTCTaGTTCCGGATGAATGGGTCG +
Preference number: 2 (lower is better)
Translates to: VFRGVFRRDLLLQAGVSLSKMSV*FRMNGS
Trigger: CGACCCATTCATCCGGAAGCAGACACTCATCTTGCT...TAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR-3UTR GCA 90 bp AACATCACTCAGAAGCCTGTGTTCTTCAAGAGCAGGTGTTCTCAGCCTCACATGCGAGCCCACCTGTGTTaGGGTTCCCACTTGGGATGG +
Preference number: 2 (lower is better)
Translates to: NITQKPVFFKSRCSQPHMRAHLC*GSHLGW
Trigger: CCATCCCAAGTGGGAACCGCAACACAGGTGGGCTCG...CATGTGAGGCTGAGAACACCTGCTCTTGAAGAACACAGGCTTCTGAGTGATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR-3UTR CCA 90 bp GAGCTTCTTCTGAGCTTCCTGCATGACTACATTTGCCAAGGCCATGTCATCTTCGGCGGTGCTCGCAGGTaGAGAGTACATCCCCACACA +
Preference number: 2 (lower is better)
Translates to: ELLLSFLHDYICQGHVIFGGARR*RVHPHT
Trigger: TGTGTGGGGATGTACTCTCCACCTGCGAGCACCGCC...GAAGATGACATGGCCTTGGCAAATGTAGTCATGCAGGAAGCTCAGAAGAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR-3UTR CCA 90 bp TCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGGAGTTCCCGCAAAGCTaGGATCTTATTTTTCTCCAG +
Preference number: 2 (lower is better)
Translates to: SFGGTSCCRLECLYSWREEFPQS*DLIFLQ
Trigger: CTGGAGAAAAATAAGATCCCAGCTTTGCGGGAACTC...CTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR-3UTR TCA 90 bp TGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATTCCACTGCTGAGTCTGAACTTGTGAGATaGGCTTCTTCTGAGCTTCCT +
Preference number: 2 (lower is better)
Translates to: CRLECLYSWRETAHSTAESELVR*ASSELP
Trigger: AGGAAGCTCAGAAGAAGCTCATCTCACAAGTTCAGA...CTCAGCAGTGGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR-3UTR TCA 90 bp AGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGGTTGTCATAGTGATAGGGTAGCCGATACGAGGCTGTaGTTCTGCCTTTGGATGGAT +
Preference number: 2 (lower is better)
Translates to: SVGDSRSSLLLGCHSDRVADTRL*FCLWMD
Trigger: ATCCATCCAAAGGCAGAATCACAGCCTCGTATCGGC...TACCCTATCACTATGACAACCAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR-3UTR GCA 90 bp TCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATTCCACTCAGCTGTTTGTCAACTaGAAAGAAGTCCTTGAGCTC +
Preference number: 2 (lower is better)
Translates to: SCCRLECLYSWRETAHSTQLFVN*KEVLEL
Trigger: GAGCTCAAGGACTTCTTTGCAGTTGACAAACAGCTG...AGTGGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR-3UTR GCA 90 bp TCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATTCCACTGACAGAATTCAGGATTaGAATGGTGCTCAGGGACAT +
Preference number: 2 (lower is better)
Translates to: SCCRLECLYSWRETAHSTDRIQD*NGAQGH
Trigger: ATGTCCCTGAGCACCATTGCAATCCTGAATTCTGTC...AGTGGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR-3UTR GCA 90 bp CTCCCTGAGATAGTGCATGAGTTCCCGCAAAGCTGGGATCTTATTTTTCTCCAGTCCACAGCAAAGCGCTaGCCAAGGACTGCGGGAAGT +
Preference number: 2 (lower is better)
Translates to: LPEIVHEFPQSWDLIFLQSTAKR*PRTAGS
Trigger: ACTTCCCGCAGTCCTTGGGCAGCGCTTTGCTGTGGA...CTGGAGAAAAATAAGATCCCAGCTTTGCGGGAACTCATGCACTATCTCAGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534532.6
3UTR-3UTR CCA 90 bp AGGTCCAGGGGTAGGATGCCATCAGCAAAGCACGCCAAAATACTAAGGCAGATTCTTCTCCACCCTGGCTaGACACAGCTGGGCTATATC +
Preference number: 2 (lower is better)
Translates to: RSRGRMPSAKHAKILRQILLHPG*TQLGYI
Trigger: GATATAGCCCAGCTGTGTCCAGCCAGGGTGGAGAAG...AATCTGCCTTAGTATTTTGGCGTGCTTTGCTGATGGCATCCTACCCCTGGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR-3UTR CCA 90 bp GATGGCCCGCTTGGTCACGTGCTCAATCTCGCCATTCGACTCTTGCTCCAAACTAAAACTCCCCGAAGCTaGCAATGTCTGGGTGTGAAT +
Preference number: 2 (lower is better)
Translates to: DGPLGHVLNLAIRLLLQTKTPRS*QCLGVN
Trigger: ATTCACACCCAGACATTGCCAGCTTCGGGGAGTTTT...AGTTTGGAGCAAGAGTCGAATGGCGAGATTGAGCACGTGACCAAGCGGGCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR-3UTR CCA 90 bp TCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATTCCACTTGGACCAGCTGTTCCTaGTACTTCTTCATGTCATAC +
Preference number: 2 (lower is better)
Translates to: SCCRLECLYSWRETAHSTWTSCS*YFFMSY
Trigger: GTATGACATGAAGAAGTACCAGGAACAGCTGGTCCA...AGTGGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR-3UTR CCA 90 bp AATACTCCTGCAATTGCTCGAGGCTATGATGAAGGCAGCAGCATCAGGAATGGACCTGGGTTGGTGGCTTaGATGGTGCCATTAGCAGGC +
Preference number: 2 (lower is better)
Translates to: NTPAIARGYDEGSSIRNGPGLVA*MVPLAG
Trigger: GCCTGCTAATGGCACCATCCAAGCCACCAACCCAGG...TCCATTCCTGATGCTGCTGCCTTCATCATAGCCTCGAGCAATTGCAGGAGTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526422.2
3UTR CAA 90 bp TACTTCACCAACAGGTCTTCGTCCATATTCCCTGTTCCATTCTCCTaGAGAACGATGTTGGAGAGGCGGTGCTCGCAGGTGGAGAGTACA +
Preference number: 2 (lower is better)
Translates to: YFTNRSSSIFPVPFS*RTMLERRCSQVEST
Trigger: TGTACTCTCCACCTGCGAGCACCGCCTCTCCAACATCGTTCTCAAGGAGAATGGAACAGGGAATATGGACGAAGACCTGTTGGTGAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR-3UTR TCA 90 bp ACGGCTTTCTTGACAGAATTCAGGATTGCAATGGTGCTCAGGGACATGGGCCTGTGCGTCAGCAATTCCTaGAGACAGTTCTTGCCTTCC +
Preference number: 2 (lower is better)
Translates to: TAFLTEFRIAMVLRDMGLCVSNS*RQFLPS
Trigger: GGAAGGCAAGAACTGTCTTCAGGAATTGCTGACGCA...CAGGCCCATGTCCCTGAGCACCATTGCAATCCTGAATTCTGTCAAGAAAGCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR-3UTR TCA 90 bp GAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGATGAAATTCCTCTTCTaGACTTGTGAGATGAGCTTC +
Preference number: 2 (lower is better)
Translates to: EGSFGGTSCCRLECLYSWMKFLF*TCEMSF
Trigger: GAAGCTCATCTCACAAGTTCAGAAGAGGAATTTCAT...CCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR-3UTR TCA 90 bp AAGTCGTTCTGCAAAAGTGTGGGGGATGGGCTGGCACAGTTAACATCAGAAAGCGAAGCAGAAATGCCATaGCTCCTGGGTTGGTGGCTT +
Preference number: 2 (lower is better)
Translates to: KSFCKSVGDGLAQLTSESEAEMP*LLGWWL
Trigger: AAGCCACCAACCCAGGAGTCATGGCATTTCTGCTTC...GCTTTCTGATGTTAACTGTGCCAGCCCATCCCCCACACTTTTGCAGAACGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526422.2
3UTR-3UTR GCA 90 bp TGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCGACAGAATTCAGGATTaGAATGGTGCTCAGGGACAT +
Preference number: 2 (lower is better)
Translates to: CLVGCFQRGLSEGPPAAGDRIQD*NGAQGH
Trigger: ATGTCCCTGAGCACCATTGCAATCCTGAATTCTGTC...GCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR-3UTR GCA 90 bp AACATCACTCAGAAGCCTGTGTTCTTCAAGAGCAGGTGTTCTCAGCCTCACATGCCCTTAACAGAGGGCTaGACAAATCGGCAGTGCTGC +
Preference number: 2 (lower is better)
Translates to: NITQKPVFFKSRCSQPHMPLTEG*TNRQCC
Trigger: GCAGCACTGCCGATTTGTGCAGCCCTCTGTTAAGGG...CATGTGAGGCTGAGAACACCTGCTCTTGAAGAACACAGGCTTCTGAGTGATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR-3UTR CCA 90 bp TGGTGGGAGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCGACACATGGAGATGTTaGGAATATACTTGTCCACCA +
Preference number: 2 (lower is better)
Translates to: WWEALFSWLFSEGSFGGTDTWRC*EYTCPP
Trigger: TGGTGGACAAGTATATTCCCAACATCTCCATGTGTC...GGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCTCCCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR-3UTR TCA 90 bp TCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATTCCACTATCGCTGTTCATCTGTaGAGTGCTCTAGAAGAAATT +
Preference number: 2 (lower is better)
Translates to: SCCRLECLYSWRETAHSTIAVHL*SALEEI
Trigger: AATTTCTTCTAGAGCACTTCACAGATGAACAGCGAT...AGTGGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR-3UTR TCA 90 bp CCACCTGTGTTGCGGTTCCCACTTGGGATGGCAGTGGGCAGATCTCAGTGGCATACAGAAAAATCCTATTaGCTACTGGAAGGCTGTATT +
Preference number: 2 (lower is better)
Translates to: PPVLRFPLGMAVGRSQWHTEKSY*LLEGCI
Trigger: AATACAGCCTTCCAGTAGTCAATAGGATTTTTCTGT...ATGCCACTGAGATCTGCCCACTGCCATCCCAAGTGGGAACCGCAACACAGGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR-3UTR TCA 90 bp CTCTTTGACTCCACGGCTTTCTTGACAGAATTCAGGATTGCAATGGTGCTCAGGCTGTTCCATTCTCCTTaGGAACGATGTTGGAGAGGC +
Preference number: 2 (lower is better)
Translates to: LFDSTAFLTEFRIAMVLRLFHSP*ERCWRG
Trigger: GCCTCTCCAACATCGTTCTCAAGGAGAATGGAACAG...CCTGAGCACCATTGCAATCCTGAATTCTGTCAAGAAAGCCGTGGAGTCAAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR-3UTR TCA 90 bp CTCCCTGAGATAGTGCATGAGTTCCCGCAAAGCTGGGATCTTATTTTTCTCCAGTCTGAGCTTCCTGCATaGCTACATTTGCCAAGGCCA +
Preference number: 2 (lower is better)
Translates to: LPEIVHEFPQSWDLIFLQSELPA*LHLPRP
Trigger: TGGCCTTGGCAAATGTAGTCATGCAGGAAGCTCAGA...CTGGAGAAAAATAAGATCCCAGCTTTGCGGGAACTCATGCACTATCTCAGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR-3UTR TCA 90 bp AGGTCCAGGGGTAGGATGCCATCAGCAAAGCACGCCAAAATACTAAGGCAGATTTATACTTGTCCACCATaGTGGTGTAGCGAATGCAGA +
Preference number: 2 (lower is better)
Translates to: RSRGRMPSAKHAKILRQIYTCPP*WCSECR
Trigger: TCTGCATTCGCTACACCATCATGGTGGACAAGTATA...AATCTGCCTTAGTATTTTGGCGTGCTTTGCTGATGGCATCCTACCCCTGGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR-3UTR GCA 90 bp AACATCACTCAGAAGCCTGTGTTCTTCAAGAGCAGGTGTTCTCAGCCTCACATGCCTGGATGCTTAGCATaGAAGTTCCCTCCATCATTG +
Preference number: 2 (lower is better)
Translates to: NITQKPVFFKSRCSQPHMPGCLA*KFPPSL
Trigger: CAATGATGGAGGGAACTTGCATGCTAAGCATCCAGG...CATGTGAGGCTGAGAACACCTGCTCTTGAAGAACACAGGCTTCTGAGTGATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR-3UTR CCA 90 bp TGGCGGCCAGTCCAGCCTTTTAAAGAACGTCAGGTGGAGCAGCCAGGTGAAAGGAATCCTATTGACTACTaGAAGGCTGTATTTATGCTA +
Preference number: 2 (lower is better)
Translates to: WRPVQPFKERQVEQPGERNPIDY*KAVFML
Trigger: TAGCATAAATACAGCCTTCCAGTAGTCAATAGGATT...CCTTTCACCTGGCTGCTCCACCTGACGTTCTTTAAAAGGCTGGACTGGCCGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR-3UTR CCA 90 bp CGAGGCCGATACGAGGCTGTGATTCTGCCTTTGGATGGATGTTGCTGTACACAGTTCCTAGCATTTCAGTaGTTAGGCATGCACACTAAA +
Preference number: 2 (lower is better)
Translates to: RGRYEAVILPLDGCCCTQFLAFQ*LGMHTK
Trigger: TTTAGTGTGCATGCCTAACCACTGAAATGCTAGGAA...CTGTGTACAGCAACATCCATCCAAAGGCAGAATCACAGCCTCGTATCGGCCTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR-3UTR CCA 90 bp AAAATACTCCTGCAATTGCTCGAGGCTATGATGAAGGCAGCAGCATCAGGAATGAAATGCCATGACTCCTaGGTTGGTGGCTTGGATGGT +
Preference number: 2 (lower is better)
Translates to: KILLQLLEAMMKAAASGMKCHDS*VGGLDG
Trigger: ACCATCCAAGCCACCAACCCAGGAGTCATGGCATTT...CATTCCTGATGCTGCTGCCTTCATCATAGCCTCGAGCAATTGCAGGAGTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526422.2
3UTR-3UTR TCA 90 bp TGGCATTTCGAATTTGAGAAAGGTCCCGGGCAGAAAAACAAATATTCTCATCTTCTCCCGGGGTTAGCCTaGGAGCTCTTAGGCTGTTCT +
Preference number: 2 (lower is better)
Translates to: WHFEFEKGPGQKNKYSHLLPGLA*ELLGCS
Trigger: AGAACAGCCTAAGAGCTCTCAGGCTAACCCCGGGAG...AAGATGAGAATATTTGTTTTTCTGCCCGGGACCTTTCTCAAATTCGAAATGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533155.5
3UTR-3UTR GCA 90 bp CTCTTTGACTCCACGGCTTTCTTGACAGAATTCAGGATTGCAATGGTGCTCAGGCTGCATGACTACATTTaGCAAGGCCATGTCATCTTC +
Preference number: 2 (lower is better)
Translates to: LFDSTAFLTEFRIAMVLRLHDYI*QGHVIF
Trigger: GAAGATGACATGGCCTTGGCAAATGTAGTCATGCAG...CCTGAGCACCATTGCAATCCTGAATTCTGTCAAGAAAGCCGTGGAGTCAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR-3UTR CCA 90 bp GATTGTCTAAGGCCAAAGGCAATTGCGAAATCAAGTCTGTCAAGTACAATAACAGTTGCGGTTCCCACTTaGGATGGCAGTGGGCAGATC +
Preference number: 2 (lower is better)
Translates to: DCLRPKAIAKSSLSSTITVAVPT*DGSGQI
Trigger: GATCTGCCCACTGCCATCCCAAGTGGGAACCGCAAC...TGTTATTGTACTTGACAGACTTGATTTCGCAATTGCCTTTGGCCTTAGACAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CAA 90 bp TCCATAAGGAGGTCTTTGTCTGGTTTAGATCTCATTGCCAAAAGCTaGATCTCCTTTGAGCTGAGGACCTCAAACGTGTCTGAGAGTAAC +
Preference number: 2 (lower is better)
Translates to: SIRRSLSGLDLIAKS*ISFELRTSNVSESN
Trigger: GTTACTCTCAGACACGTTTGAGGTCCTCAGCTCAAAGGAGATCAAGCTTTTGGCAATGAGATCTAAACCAGACAAAGACCTCCTTATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR-3UTR GCA 90 bp CTCTTTGACTCCACGGCTTTCTTGACAGAATTCAGGATTGCAATGGTGCTCAGGTGGTTTAGATCTCATTaGCAAAAGCTTGATCTCCTT +
Preference number: 2 (lower is better)
Translates to: LFDSTAFLTEFRIAMVLRWFRSH*QKLDLL
Trigger: AAGGAGATCAAGCTTTTGGCAATGAGATCTAAACCA...CCTGAGCACCATTGCAATCCTGAATTCTGTCAAGAAAGCCGTGGAGTCAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR-3UTR GCA 90 bp GATTGTCTAAGGCCAAAGGCAATTGCGAAATCAAGTCTGTCAAGTACAATAACAGCATGGCATCCTGGATaGTTAGCATGCAAGTTCCCT +
Preference number: 2 (lower is better)
Translates to: DCLRPKAIAKSSLSSTITAWHPG*LACKFP
Trigger: AGGGAACTTGCATGCTAAGCATCCAGGATGCCATGC...TGTTATTGTACTTGACAGACTTGATTTCGCAATTGCCTTTGGCCTTAGACAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR-3UTR CCA 90 bp GATTGTCTAAGGCCAAAGGCAATTGCGAAATCAAGTCTGTCAAGTACAATAACATGTGTGCCTGGAGAATaGCTCTCACTACTCACCTTG +
Preference number: 2 (lower is better)
Translates to: DCLRPKAIAKSSLSSTITCVPGE*LSLLTL
Trigger: CAAGGTGAGTAGTGAGAGCCATTCTCCAGGCACACA...TGTTATTGTACTTGACAGACTTGATTTCGCAATTGCCTTTGGCCTTAGACAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR-3UTR GCA 90 bp GATTGTCTAAGGCCAAAGGCAATTGCGAAATCAAGTCTGTCAAGTACAATAACATTTCCCAAGAAGGGATaGTGTTCATGTCTGTTAGGG +
Preference number: 2 (lower is better)
Translates to: DCLRPKAIAKSSLSSTITFPKKG*CSCLLG
Trigger: CCCTAACAGACATGAACAGCATCCCTTCTTGGGAAA...TGTTATTGTACTTGACAGACTTGATTTCGCAATTGCCTTTGGCCTTAGACAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR GCA 72 bp GGCGCCCCCGCTCTAGCTCACTGTTGCCTCGCTGTCTaGCAGGAGGCCCTGCCATCCTTGGGCCCTGGCAGT +
Preference number: 3 (lower is better)
Translates to: GAPALAHCCLAV*QEALPSLGPGS
Trigger: ACTGCCAGGGCCCAAGGATGGCAGGGCCTCCTGGCAGACAGCGAGGCAACAGTGAGCTAGAGCGGGGGCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR GCA 72 bp GGGCAGGAGGTCAGCCTGTGTGCTCAAGAGCAGTGCTaGGCCTCTCCGCCACCGAGCCCACCTGTGTTGCGG +
Preference number: 3 (lower is better)
Translates to: GQEVSLCAQEQC*ASPPPSPPVLR
Trigger: CCGCAACACAGGTGGGCTCGGTGGCGGAGAGGCGCAGCACTGCTCTTGAGCACACAGGCTGACCTCCTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR GCA 72 bp AGTGCTGCGCCTCTCCGCCACCGAGCCCACCTGTGTTaGGGTTCCCACTTGGGATGGCAGTGGGCAGATCTC +
Preference number: 3 (lower is better)
Translates to: SAAPLRHRAHLC*GSHLGWQWADL
Trigger: GAGATCTGCCCACTGCCATCCCAAGTGGGAACCGCAACACAGGTGGGCTCGGTGGCGGAGAGGCGCAGCACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CCA 72 bp CCCTGGGTGTGCAGGGCTGGCTCACGGCAGGTGACATaGCAGGGTTTTCTTGGCCAGCAGGAACTGGCACTG +
Preference number: 3 (lower is better)
Translates to: PWVCRAGSRQVT*QGFLGQQELAL
Trigger: CAGTGCCAGTTCCTGCTGGCCAAGAAAACCCTGCCATGTCACCTGCCGTGAGCCAGCCCTGCACACCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR CCA 72 bp CACCGAGCCCACCTGTGTTGCGGTTCCCACTTGGGATaGCAGTGGGCAGATCTCAGTGGCATCCCATCCCCC +
Preference number: 3 (lower is better)
Translates to: HRAHLCCGSHLG*QWADLSGIPSP
Trigger: GGGGGATGGGATGCCACTGAGATCTGCCCACTGCCATCCCAAGTGGGAACCGCAACACAGGTGGGCTCGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR TCA 72 bp ACTTGCCCTGGGTGTGCAGGGCTGGCTCACGGCAGGTaGCATGGCAGGGTTTTCTTGGCCAGCAGGAACTGG +
Preference number: 3 (lower is better)
Translates to: TCPGCAGLAHGR*HGRVFLASRNW
Trigger: CCAGTTCCTGCTGGCCAAGAAAACCCTGCCATGTCACCTGCCGTGAGCCAGCCCTGCACACCCAGGGCAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR CCA 72 bp TCCGCCACCGAGCCCACCTGTGTTGCGGTTCCCACTTaGGATGGCAGTGGGCAGATCTCAGTGGCATCCCAT +
Preference number: 3 (lower is better)
Translates to: SATEPTCVAVPT*DGSGQISVASH
Trigger: ATGGGATGCCACTGAGATCTGCCCACTGCCATCCCAAGTGGGAACCGCAACACAGGTGGGCTCGGTGGCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CCA 72 bp CCCTCAGATGTACATACACAGATGCCAGTCAGCTCCTaGGGTTGCGCCAGGCGCCCCCGCTCTAGCTCACTG +
Preference number: 3 (lower is better)
Translates to: PSDVHTQMPVSS*GCARRPRSSSL
Trigger: CAGTGAGCTAGAGCGGGGGCGCCTGGCGCAACCCCAGGAGCTGACTGGCATCTGTGTATGTACATCTGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR-3UTR CAA 90 bp CTTGGGCCCTGGCAGTGGCTGTGTCCCAGTGAGCTTTACTCACGTGGCCCTTGCTGTTGCGGTTCCCACTaGGGATGGCAGTGGGCAGAT +
Preference number: 3 (lower is better)
Translates to: LGPWQWLCPSELYSRGPCCCGSH*GWQWAD
Trigger: ATCTGCCCACTGCCATCCCAAGTGGGAACCGCAACA...GCAAGGGCCACGTGAGTAAAGCTCACTGGGACACAGCCACTGCCAGGGCCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR GCA 72 bp AGTGATCCAGCTGCCTTCACACGGAGGACACGAGACTaGTTCCTCAAGGGCTCCTGCCTGCCTGGACACTGG +
Preference number: 3 (lower is better)
Translates to: SDPAAFTRRTRD*FLKGSCLPGHW
Trigger: CCAGTGTCCAGGCAGGCAGGAGCCCTTGAGGAAGCAGTCTCGTGTCCTCCGTGTGAAGGCAGCTGGATCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525964.6
ENST00000534532.6
ENST00000534548.7
3UTR GCA 72 bp GTTCCCCCATCATGGGAGCAGCCCTTAACAGAGGGCTaGACAAATCGGCAGTGCTGCTCTGGGGAAGGCTGC +
Preference number: 3 (lower is better)
Translates to: VPPSWEQPLTEG*TNRQCCSGEGC
Trigger: GCAGCCTTCCCCAGAGCAGCACTGCCGATTTGTGCAGCCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR GCA 72 bp GATGTACATACACAGATGCCAGTCAGCTCCTGGGGTTaGGCCAGGCGCCCCCGCTCTAGCTCACTGTTGCCT +
Preference number: 3 (lower is better)
Translates to: DVHTQMPVSSWG*ARRPRSSSLLP
Trigger: AGGCAACAGTGAGCTAGAGCGGGGGCGCCTGGCGCAACCCCAGGAGCTGACTGGCATCTGTGTATGTACATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CCA 72 bp GGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTaGCGGGAGACCGCACATTCCACTGCTGAGGCTGTG +
Preference number: 3 (lower is better)
Translates to: GTSCCRLECLYS*RETAHSTAEAV
Trigger: CACAGCCTCAGCAGTGGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR CCA 72 bp GCCCACCTGTGTTGCGGTTCCCACTTGGGATGGCAGTaGGCAGATCTCAGTGGCATCCCATCCCCCAAACCA +
Preference number: 3 (lower is better)
Translates to: AHLCCGSHLGWQ*ADLSGIPSPKP
Trigger: TGGTTTGGGGGATGGGATGCCACTGAGATCTGCCCACTGCCATCCCAAGTGGGAACCGCAACACAGGTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CCA 72 bp TCCAGCACAGCTCTCAGGTGGGCACTGCAGGGACACTaGTGTCTTCCATGTAGCGTCCCAGCTTTGGGCTCC +
Preference number: 3 (lower is better)
Translates to: SSTALRWALQGH*CLPCSVPALGS
Trigger: GGAGCCCAAAGCTGGGACGCTACATGGAAGACACCAGTGTCCCTGCAGTGCCCACCTGAGAGCTGTGCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR TCA 72 bp TTCCACAGCAAAGCGCTGCCCAAGGACTGCGGGAAGTaGTCCAGCTGCCTTCACACGGAGGACACGAGACTG +
Preference number: 3 (lower is better)
Translates to: FHSKALPKDCGK*SSCLHTEDTRL
Trigger: CAGTCTCGTGTCCTCCGTGTGAAGGCAGCTGGATCACTTCCCGCAGTCCTTGGGCAGCGCTTTGCTGTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534532.6
ENST00000534548.7
3UTR CCA 72 bp GGCCCTGTTTCAGGTGTAGGAGATGATACTGCTACATaGCCAGCACTTGCCCTGGGTGTGCAGGGCTGGCTC +
Preference number: 3 (lower is better)
Translates to: GPVSGVGDDTAT*PALALGVQGWL
Trigger: GAGCCAGCCCTGCACACCCAGGGCAAGTGCTGGCCATGTAGCAGTATCATCTCCTACACCTGAAACAGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR CCA 72 bp CAGAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTaGAGTGTCTTTATTCCTGGCGGGAGACCGCACATT +
Preference number: 3 (lower is better)
Translates to: QRGLSEGPPAAG*SVFIPGGRPHI
Trigger: AATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR CCA 72 bp AGTGGCGGCCAGTCCAGCCTTTTAAAGAACGTCAGGTaGAGCAGCCAGGTGAAAGGCCTGGCGGGGAGGAAA +
Preference number: 3 (lower is better)
Translates to: SGGQSSLLKNVR*SSQVKGLAGRK
Trigger: TTTCCTCCCCGCCAGGCCTTTCACCTGGCTGCTCCACCTGACGTTCTTTAAAAGGCTGGACTGGCCGCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR-3UTR CAA 90 bp GGTGCCACCTCAGCACCTCCAGCCGTCCCGGCCACATCTGCATGTTTTGCTAGCCTGGGATGCTCTTCTTaGCCAGATCCTCGTGCTGTA +
Preference number: 3 (lower is better)
Translates to: GATSAPPAVPATSACFASLGCSS*PDPRAV
Trigger: TACAGCACGAGGATCTGGCAAAGAAGAGCATCCCAG...GCTAGCAAAACATGCAGATGTGGCCGGGACGGCTGGAGGTGCTGAGGTGGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR-3UTR CAA 90 bp TCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGCATGGCAGGGTTTTCTaGGCCAGCAGGAACTGGCAC +
Preference number: 3 (lower is better)
Translates to: SFGGTSCCRLECLYSWREHGRVF*ASRNWH
Trigger: GTGCCAGTTCCTGCTGGCCAAGAAAACCCTGCCATG...CTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR-3UTR CAA 90 bp TGGTGGGAGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTTGAGAACGATGTaGGAGAGGCGGTGCTCGCAG +
Preference number: 3 (lower is better)
Translates to: WWEALFSWLFSEGSFGGTSLRTM*ERRCSQ
Trigger: CTGCGAGCACCGCCTCTCCAACATCGTTCTCAAGGA...GGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCTCCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR-3UTR CAA 90 bp GGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGACAATGATGACGTTGTaGCGGACAGCCACGTCCTCA +
Preference number: 3 (lower is better)
Translates to: GVFRRDLLLQAGVSLFLATMMTL*RTATSS
Trigger: TGAGGACGTGGCTGTCCGCAACAACGTCATCATTGT...CGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR GCA 72 bp CTCTTCTCGGGGGTGCTGATGGCCCGCTTGGTCACGTaGTCAATCTCGCCATTCGACTCTTGCTCCAAACTG +
Preference number: 3 (lower is better)
Translates to: LFSGVLMARLVT*SISPFDSCSKL
Trigger: CAGTTTGGAGCAAGAGTCGAATGGCGAGATTGAGCACGTGACCAAGCGGGCCATCAGCACCCCCGAGAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR GCA 72 bp CGACGGAGTCCGTGGTGTCCCGATGTAACTGACCCCTaGTCCAAACGTGACATCACTGATGCTCTTCTCGGG +
Preference number: 3 (lower is better)
Translates to: RRSPWCPDVTDP*SKRDITDALLG
Trigger: CCCGAGAAGAGCATCAGTGATGTCACGTTTGGAGCAGGGGTCAGTTACATCGGGACACCACGGACTCCGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR GCA 72 bp CTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTaGAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACC +
Preference number: 3 (lower is better)
Translates to: LFSEGSFGGTSC*RLECLYSWRET
Trigger: GGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR GCA 72 bp TGCTCCAGCAGTGGCTCAGTGCTCCCTGGTGTCTGCTaGATGGCATCCTGGATGCTTAGCATGCAAGTTCCC +
Preference number: 3 (lower is better)
Translates to: CSSSGSVLPGVC*MASWMLSMQVP
Trigger: GGGAACTTGCATGCTAAGCATCCAGGATGCCATGCAGCAGACACCAGGGAGCACTGAGCCACTGCTGGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR GCA 72 bp ATGATGAAGGCAGCAGCATCAGGAATGGAGCGGGGCTaGCCTGAGACACCTCAGAGGCAGGACAGTGGTAGT +
Preference number: 3 (lower is better)
Translates to: MMKAAASGMERG*PETPQRQDSGS
Trigger: ACTACCACTGTCCTGCCTCTGAGGTGTCTCAGGGCAGCCCCGCTCCATTCCTGATGCTGCTGCCTTCATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526422.2
3UTR CCA 72 bp CGGTTCCCACTTGGGATGGCAGTGGGCAGATCTCAGTaGCATCCCATCCCCCAAACCAACCAACGCACATCA +
Preference number: 3 (lower is better)
Translates to: RFPLGMAVGRSQ*HPIPQTNQRTS
Trigger: TGATGTGCGTTGGTTGGTTTGGGGGATGGGATGCCACTGAGATCTGCCCACTGCCATCCCAAGTGGGAACCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR TCA 72 bp GAGTGGTCAGCATCAGCAGACGAAGCCAGGACGGACTaGATCAGAAGGAAGATGCGCTTCTCCACCCTGGCT +
Preference number: 3 (lower is better)
Translates to: EWSASADEARTD*IRRKMRFSTLA
Trigger: AGCCAGGGTGGAGAAGCGCATCTTCCTTCTGATTCAGTCCGTCCTGGCTTCGTCTGCTGATGCTGACCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR GCA 72 bp GTTCCATTCTCCTTGAGAACGATGTTGGAGAGGCGGTaGTCGCAGGTGGAGAGTACATCCCCACACACCTGC +
Preference number: 3 (lower is better)
Translates to: VPFSLRTMLERR*SQVESTSPHTC
Trigger: GCAGGTGTGTGGGGATGTACTCTCCACCTGCGAGCACCGCCTCTCCAACATCGTTCTCAAGGAGAATGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR-3UTR CAA 90 bp TCGTGTTCCACAGCAAAGCGCTGCCCAAGGACTGCGGGAAGTGATCCAGCTGCCCTCATTGCCAAAAGCTaGATCTCCTTTGAGCTGAGG +
Preference number: 3 (lower is better)
Translates to: SCSTAKRCPRTAGSDPAALIAKS*ISFELR
Trigger: CCTCAGCTCAAAGGAGATCAAGCTTTTGGCAATGAG...GGCAGCTGGATCACTTCCCGCAGTCCTTGGGCAGCGCTTTGCTGTGGAACACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534532.6
3UTR-3UTR CAA 90 bp CTTGGGCCCTGGCAGTGGCTGTGTCCCAGTGAGCTTTACTCACGTGGCCCTTGCGCTCTTACGTTGGGTTaGTCTCTTCTTCCTAGCATT +
Preference number: 3 (lower is better)
Translates to: LGPWQWLCPSELYSRGPCALTLG*SLLPSI
Trigger: AATGCTAGGAAGAAGAGACAAACCCAACGTAAGAGC...GCAAGGGCCACGTGAGTAAAGCTCACTGGGACACAGCCACTGCCAGGGCCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR-3UTR CAA 90 bp TGGCGGCCAGTCCAGCCTTTTAAAGAACGTCAGGTGGAGCAGCCAGGTGAAAGGGCTCCAGCCTCCTTCTaGGTTGTCATAGTGATAGGG +
Preference number: 3 (lower is better)
Translates to: WRPVQPFKERQVEQPGERAPASF*VVIVIG
Trigger: CCCTATCACTATGACAACCAAGAAGGAGGCTGGAGC...CCTTTCACCTGGCTGCTCCACCTGACGTTCTTTAAAAGGCTGGACTGGCCGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR GCA 72 bp CTCAGGGACATGGGCCTGGCTTTGGGCAGCAACCTCTaGAATGGCCCTGTTTCAGGTGTAGGAGATGATACT +
Preference number: 3 (lower is better)
Translates to: LRDMGLALGSNL*NGPVSGVGDDT
Trigger: AGTATCATCTCCTACACCTGAAACAGGGCCATTGCAGAGGTTGCTGCCCAAAGCCAGGCCCATGTCCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR-3UTR CAA 90 bp TCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGTCCTCCTGCAAGAGATaGGTAAGCAAGATGAGTGTC +
Preference number: 3 (lower is better)
Translates to: SFGGTSCCRLECLYSWRESSCKR*VSKMSV
Trigger: GACACTCATCTTGCTTACCAATCTCTTGCAGGAGGA...CTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR-3UTR CAA 90 bp AACATCACTCAGAAGCCTGTGTTCTTCAAGAGCAGGTGTTCTCAGCCTCACATGCCGAGCCCACCTGTGTaGCGGTTCCCACTTGGGATG +
Preference number: 3 (lower is better)
Translates to: NITQKPVFFKSRCSQPHMPSPPV*RFPLGM
Trigger: CATCCCAAGTGGGAACCGCAACACAGGTGGGCTCGG...CATGTGAGGCTGAGAACACCTGCTCTTGAAGAACACAGGCTTCTGAGTGATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR TCA 72 bp ACAGGTCTTCGTCCATATTCCCTGTTCCATTCTCCTTaGGAACGATGTTGGAGAGGCGGTGCTCGCAGGTGG +
Preference number: 3 (lower is better)
Translates to: TGLRPYSLFHSP*ERCWRGGARRW
Trigger: CCACCTGCGAGCACCGCCTCTCCAACATCGTTCTCAAGGAGAATGGAACAGGGAATATGGACGAAGACCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR TCA 72 bp TCTTTATTCCTGGCGGGAGACCGCACATTCCACTGCTaGGGCTGTGGGGGCGGTTTATCAGGCAGTGATAAA +
Preference number: 3 (lower is better)
Translates to: SLFLAGDRTFHC*GCGGGLSGSDK
Trigger: TTTATCACTGCCTGATAAACCGCCCCCACAGCCTCAGCAGTGGAATGTGCGGTCTCCCGCCAGGAATAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR GCA 72 bp AAATGCTCCAGCAGTGGCTCAGTGCTCCCTGGTGTCTaGTGCATGGCATCCTGGATGCTTAGCATGCAAGTT +
Preference number: 3 (lower is better)
Translates to: KCSSSGSVLPGV*CMASWMLSMQV
Trigger: AACTTGCATGCTAAGCATCCAGGATGCCATGCAGCAGACACCAGGGAGCACTGAGCCACTGCTGGAGCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CCA 72 bp GTGCTAACAGAAGAGACTCAAGCTGTTCCCCCATCATaGGAGCAGCCCTTAACAGAGGGCTGCACAAATCGG +
Preference number: 3 (lower is better)
Translates to: VLTEETQAVPPS*EQPLTEGCTNR
Trigger: CCGATTTGTGCAGCCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTTAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR-3UTR CAA 90 bp AATTCAGGATTGCAATGGTGCTCAGGGACATGGGCCTGGCTTTGGGCAGCAACCATTACAATGATGACGTaGTTGCGGACAGCCACGTCC +
Preference number: 3 (lower is better)
Translates to: NSGLQWCSGTWAWLWAATITMMT*LRTATS
Trigger: GGACGTGGCTGTCCGCAACAACGTCATCATTGTAAT...GGTTGCTGCCCAAAGCCAGGCCCATGTCCCTGAGCACCATTGCAATCCTGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR GCA 72 bp TGCTGTTCATGTCTGTTAGGGAAAGCACACCGCCTCTaGCTGGGCACAGATGAACTGCCCTTCAAGACAATC +
Preference number: 3 (lower is better)
Translates to: CCSCLLGKAHRL*LGTDELPFKTI
Trigger: GATTGTCTTGAAGGGCAGTTCATCTGTGCCCAGGCAGAGGCGGTGTGCTTTCCCTAACAGACATGAACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR-3UTR CAA 90 bp AAAATACTCCTGCAATTGCTCGAGGCTATGATGAAGGCAGCAGCATCAGGAATGTCCTGGGTTGGTGGCTaGGATGGTGCCATTAGCAGG +
Preference number: 3 (lower is better)
Translates to: KILLQLLEAMMKAAASGMSWVGG*DGAISR
Trigger: CCTGCTAATGGCACCATCCAAGCCACCAACCCAGGA...CATTCCTGATGCTGCTGCCTTCATCATAGCCTCGAGCAATTGCAGGAGTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526422.2
3UTR TCA 72 bp CAGGCAAAACTCCCCGAAGCTGGCAATGTCTGGGTGTaGATCGATCAGAGTGCTGACAAATCGGAAGAACAG +
Preference number: 3 (lower is better)
Translates to: QAKLPEAGNVWV*IDQSADKSEEQ
Trigger: CTGTTCTTCCGATTTGTCAGCACTCTGATCGATTCACACCCAGACATTGCCAGCTTCGGGGAGTTTTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR TCA 72 bp GACTCCGATGCCTGCTCTTTGACTCCACGGCTTTCTTaGCAGAATTCAGGATTGCAATGGTGCTCAGGGACA +
Preference number: 3 (lower is better)
Translates to: DSDACSLTPRLS*QNSGLQWCSGT
Trigger: TGTCCCTGAGCACCATTGCAATCCTGAATTCTGTCAAGAAAGCCGTGGAGTCAAAGAGCAGGCATCGGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR TCA 72 bp GACGCCACAGGCTCTGTCGCATTTCAAAACAAACCATaGTGGAGTGGCGGCCAGTCCAGCCTTTTAAAGAAC +
Preference number: 3 (lower is better)
Translates to: DATGSVAFQNKP*WSGGQSSLLKN
Trigger: GTTCTTTAAAAGGCTGGACTGGCCGCCACTCCATCATGGTTTGTTTTGAAATGCGACAGAGCCTGTGGCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR GCA 72 bp ACCAGGGCTGGGATGCTCTTCTTTGCCAGATCCTCGTaGTGTAAGCACAGCTTACCTAAGGTAATGATGGCA +
Preference number: 3 (lower is better)
Translates to: TRAGMLFFARSS*CKHSLPKVMMA
Trigger: TGCCATCATTACCTTAGGTAAGCTGTGCTTACAGCACGAGGATCTGGCAAAGAAGAGCATCCCAGCCCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR GCA 72 bp AAAGTGAAAGGCAGCACTCCTAAGCTCCGACTCCGATaGCTGCTCTTTGACTCCACGGCTTTCTTGACAGAA +
Preference number: 3 (lower is better)
Translates to: KVKGSTPKLRLR*LLFDSTAFLTE
Trigger: TTCTGTCAAGAAAGCCGTGGAGTCAAAGAGCAGGCATCGGAGTCGGAGCTTAGGAGTGCTGCCTTTCACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR-3UTR CAA 90 bp TCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATTCCACTGCTGCAGTTTTAAAGTaGTGTTCCTTAAAGACCAGA +
Preference number: 3 (lower is better)
Translates to: SCCRLECLYSWRETAHSTAAVLK*CSLKTR
Trigger: TCTGGTCTTTAAGGAACACAACTTTAAAACTGCAGC...AGTGGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534532.6
3UTR-3UTR CAA 90 bp AGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGGTTGTCATAGTGATAGGGTAGCCTTTGGATGGATGTaGCTGTACACAGATGCTACA +
Preference number: 3 (lower is better)
Translates to: SVGDSRSSLLLGCHSDRVAFGWM*LYTDAT
Trigger: TGTAGCATCTGTGTACAGCAACATCCATCCAAAGGC...TACCCTATCACTATGACAACCAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR-3UTR CAA 90 bp GATTGTCTAAGGCCAAAGGCAATTGCGAAATCAAGTCTGTCAAGTACAATAACATCCCCACCCTCAGCGTaGGGGATTCACGCTCCAGCC +
Preference number: 3 (lower is better)
Translates to: DCLRPKAIAKSSLSSTITSPPSA*GIHAPA
Trigger: GGCTGGAGCGTGAATCCCCAACGCTGAGGGTGGGGA...TGTTATTGTACTTGACAGACTTGATTTCGCAATTGCCTTTGGCCTTAGACAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR TCA 72 bp AGCTGGCAATGTCTGGGTGTGAATCGATCAGAGTGCTaGCAAATCGGAAGAACAGGGAGCCCTTCCATTTCA +
Preference number: 3 (lower is better)
Translates to: SWQCLGVNRSEC*QIGRTGSPSIS
Trigger: TGAAATGGAAGGGCTCCCTGTTCTTCCGATTTGTCAGCACTCTGATCGATTCACACCCAGACATTGCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR TCA 72 bp GAATGTGACTCAAGACTCGAGGCCGATACGAGGCTGTaGTTCTGCCTTTGGATGGATGTTGCTGTACACAGA +
Preference number: 3 (lower is better)
Translates to: ECDSRLEADTRL*FCLWMDVAVHR
Trigger: TCTGTGTACAGCAACATCCATCCAAAGGCAGAATCACAGCCTCGTATCGGCCTCGAGTCTTGAGTCACATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR GCA 72 bp TCCTCCTGCAAGAGATTGGTAAGCAAGATGAGTGTCTaGTTCCGGATGAATGGGTCGGAATCCTTCAGACAC +
Preference number: 3 (lower is better)
Translates to: SSCKRLVSKMSV*FRMNGSESFRH
Trigger: GTGTCTGAAGGATTCCGACCCATTCATCCGGAAGCAGACACTCATCTTGCTTACCAATCTCTTGCAGGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR CCA 72 bp CACCTCCCTGAGATAGTGCATGAGTTCCCGCAAAGCTaGGATCTTATTTTTCTCCAGCACAGTCTTCAGGGA +
Preference number: 3 (lower is better)
Translates to: HLPEIVHEFPQS*DLIFLQHSLQG
Trigger: TCCCTGAAGACTGTGCTGGAGAAAAATAAGATCCCAGCTTTGCGGGAACTCATGCACTATCTCAGGGAGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR CCA 72 bp AAATTTTTCATCCGCCGGAGACACTGCTCCCATTTGTaGGGGGACATTAGCAACATCACTCAGAAGCCTGTG +
Preference number: 3 (lower is better)
Translates to: KFFIRRRHCSHL*GDISNITQKPV
Trigger: CACAGGCTTCTGAGTGATGTTGCTAATGTCCCCCCACAAATGGGAGCAGTGTCTCCGGCGGATGAAAAATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CCA 72 bp AGGCTCTGTCGCATTTCAAAACAAACCATGATGGAGTaGCGGCCAGTCCAGCCTTTTAAAGAACGTCAGGTG +
Preference number: 3 (lower is better)
Translates to: RLCRISKQTMME*RPVQPFKERQV
Trigger: CACCTGACGTTCTTTAAAAGGCTGGACTGGCCGCCACTCCATCATGGTTTGTTTTGAAATGCGACAGAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR-3UTR CAA 90 bp GTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTAACATTCAATGAAGTGTaGGAAGAACATGACAGGGTT +
Preference number: 3 (lower is better)
Translates to: VFRGVFRRDLLLQAGVSLTFNEV*EEHDRV
Trigger: AACCCTGTCATGTTCTTCCAACACTTCATTGAATGT...TAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR-3UTR CAA 90 bp TCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATTCCACTTTCGTCTCTCTTTGTTaGACTTTCCCTTCAATGAAA +
Preference number: 3 (lower is better)
Translates to: SCCRLECLYSWRETAHSTFVSLC*TFPSMK
Trigger: TTTCATTGAAGGGAAAGTCAAACAAAGAGAGACGAA...AGTGGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR-3UTR CAA 90 bp GGTGGGAGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTTTCATTCGTCTCTCTTaGTTTGACTTTCCCTTCAAT +
Preference number: 3 (lower is better)
Translates to: GGRRCLVGCFQRGLSEGPFIRLS*FDFPFN
Trigger: ATTGAAGGGAAAGTCAAACAAAGAGAGACGAATGAA...AGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCTCCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR-3UTR CAA 90 bp CCCACTAGTGCTAACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCGCTGCAGTTTTAAAGTaGTGTTCCTTAAAGACCAGA +
Preference number: 3 (lower is better)
Translates to: PTSANRRDSSCSPIMGAAAAVLK*CSLKTR
Trigger: TCTGGTCTTTAAGGAACACAACTTTAAAACTGCAGC...GGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTTAGCACTAGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CCA 72 bp ATTGGTAAGCAAGATGAGTGTCTGCTTCCGGATGAATaGGTCGGAATCCTTCAGACACATGGAGATGTTGGG +
Preference number: 3 (lower is better)
Translates to: IGKQDECLLPDE*VGILQTHGDVG
Trigger: CCCAACATCTCCATGTGTCTGAAGGATTCCGACCCATTCATCCGGAAGCAGACACTCATCTTGCTTACCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR-3UTR CAA 90 bp AACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCCTTAACAGAGGGAACAGAAAAATCCTATaGACTACTGGAAGGCTGTAT +
Preference number: 3 (lower is better)
Translates to: NRRDSSCSPIMGAALNRGNRKIL*TTGRLY
Trigger: ATACAGCCTTCCAGTAGTCAATAGGATTTTTCTGTT...CCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR-3UTR CAA 90 bp AAGTCGTTCTGCAAAAGTGTGGGGGATGGGCTGGCACAGTTAACATCAGAAAGCAAAATACTCCTGCAATaGCTCGAGGCTATGATGAAG +
Preference number: 3 (lower is better)
Translates to: KSFCKSVGDGLAQLTSESKILLQ*LEAMMK
Trigger: CTTCATCATAGCCTCGAGCAATTGCAGGAGTATTTT...GCTTTCTGATGTTAACTGTGCCAGCCCATCCCCCACACTTTTGCAGAACGACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526422.2
3UTR GCA 72 bp GATGAGCTTCTTCTGAGCTTCCTGCATGACTACATTTaGCAAGGCCATGTCATCTTCTTCCATAAGGAGGTC +
Preference number: 3 (lower is better)
Translates to: DELLLSFLHDYI*QGHVIFFHKEV
Trigger: GACCTCCTTATGGAAGAAGATGACATGGCCTTGGCAAATGTAGTCATGCAGGAAGCTCAGAAGAAGCTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR GCA 72 bp CGATACGAGGCTGTGATTCTGCCTTTGGATGGATGTTaGTGTACACAGATGCTACAGACTTGTACTAACACA +
Preference number: 3 (lower is better)
Translates to: RYEAVILPLDGC*CTQMLQTCTNT
Trigger: TGTGTTAGTACAAGTCTGTAGCATCTGTGTACAGCAACATCCATCCAAAGGCAGAATCACAGCCTCGTATCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR TCA 72 bp GACACATGGAGATGTTGGGAATATACTTGTCCACCATaGTGGTGTAGCGAATGCAGAGATCGCACATTACAA +
Preference number: 3 (lower is better)
Translates to: DTWRCWEYTCPP*WCSECRDRTLQ
Trigger: TTGTAATGTGCGATCTCTGCATTCGCTACACCATCATGGTGGACAAGTATATTCCCAACATCTCCATGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR CCA 72 bp GGCCATGTCATCTTCTTCCATAAGGAGGTCTTTGTCTaGTTTAGATCTCATTGCCAAAAGCTTGATCTCCTT +
Preference number: 3 (lower is better)
Translates to: GHVIFFHKEVFV*FRSHCQKLDLL
Trigger: AAGGAGATCAAGCTTTTGGCAATGAGATCTAAACCAGACAAAGACCTCCTTATGGAAGAAGATGACATGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
3UTR CCA 72 bp TTACGTTGGGTTTGTCTCTTCTTCCTAGCATTTCAGTaGTTAGGCATGCACACTAAAAATGCTATCAATCAC +
Preference number: 3 (lower is better)
Translates to: LRWVCLFFLAFQ*LGMHTKNAINH
Trigger: GTGATTGATAGCATTTTTAGTGTGCATGCCTAACCACTGAAATGCTAGGAAGAAGAGACAAACCCAACGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR GCA 72 bp ATACAATCCATAATAAGCCAGTTCTGGTATGTATTTTaGTTGGTTAAGAGCTCTGGCTTGTGTAACATGACA +
Preference number: 3 (lower is better)
Translates to: IQSIISQFWYVF*LVKSSGLCNMT
Trigger: TGTCATGTTACACAAGCCAGAGCTCTTAACCAAGCAAAATACATACCAGAACTGGCTTATTATGGATTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533155.5
CDS-3UTR TCA 90 bp GCGCCTCTCCGCCACCGAGCCCACCTGTGTTGCGGTTCCCACTTGGGATGGCAGGGTGGAGCAGCCAGGTaGAAGGCCTGGCGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: APLRHRAHLCCGSHLGWQGGAAR*KAWRGG
Trigger: TCCTCCCCGCCAGGCCTTTCACCTGGCTGCTCCACC...CTGCCATCCCAAGTGGGAACCGCAACACAGGTGGGCTCGGTGGCGGAGAGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CAA 72 bp TGGGGTTGCGCCAGGCGCCCCCGCTCTAGCTCACTGTaGCCTCGCTGTCTGCCAGGAGGCCCTGCCATCCTT +
Preference number: 4 (lower is better)
Translates to: WGCARRPRSSSL*PRCLPGGPAIL
Trigger: AAGGATGGCAGGGCCTCCTGGCAGACAGCGAGGCAACAGTGAGCTAGAGCGGGGGCGCCTGGCGCAACCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp GTGTGCTCAAGAGCAGTGCTGCGCCTCTCCGCCACCGAGCCCACCTGTGTTGCGTGTGCTCAAGAGCAGTaGTGCGCCTCTCCGCCACCG +
Preference number: 4 (lower is better)
Translates to: VCSRAVLRLSATEPTCVACAQEQ*CASPPP
Trigger: CGGTGGCGGAGAGGCGCAGCACTGCTCTTGAGCACA...CGCAACACAGGTGGGCTCGGTGGCGGAGAGGCGCAGCACTGCTCTTGAGCACAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CAA 72 bp CAGTGCTGCGCCTCTCCGCCACCGAGCCCACCTGTGTaGCGGTTCCCACTTGGGATGGCAGTGGGCAGATCT +
Preference number: 4 (lower is better)
Translates to: QCCASPPPSPPV*RFPLGMAVGRS
Trigger: AGATCTGCCCACTGCCATCCCAAGTGGGAACCGCAACACAGGTGGGCTCGGTGGCGGAGAGGCGCAGCACTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp GTGTGCTCAAGAGCAGTGCTGCGCCTCTCCGCCACCGAGCCCACCTGTGTTGCGGCAGGGTCCCGACACTaGTCCTGCAGAATCCACAGG +
Preference number: 4 (lower is better)
Translates to: VCSRAVLRLSATEPTCVAAGSRH*SCRIHR
Trigger: CCTGTGGATTCTGCAGGACCAGTGTCGGGACCCTGC...CGCAACACAGGTGGGCTCGGTGGCGGAGAGGCGCAGCACTGCTCTTGAGCACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp CTTGGGCCCTGGCAGTGGCTGTGTCCCAGTGAGCTTTACTCACGTGGCCCTTGCGGGTGGCTGAGACGCTaGGGCCTCACTGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: LGPWQWLCPSELYSRGPCGWLRR*GLTAAL
Trigger: CAAGGCAGCAGTGAGGCCCCAGCGTCTCAGCCACCC...GCAAGGGCCACGTGAGTAAAGCTCACTGGGACACAGCCACTGCCAGGGCCCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp GCGCCTCTCCGCCACCGAGCCCACCTGTGTTGCGGTTCCCACTTGGGATGGCAGTGCCTGCCTGGACACTaGTGGGAGGCGCTGTTTAGT +
Preference number: 4 (lower is better)
Translates to: APLRHRAHLCCGSHLGWQCLPGH*WEALFS
Trigger: ACTAAACAGCGCCTCCCACCAGTGTCCAGGCAGGCA...CTGCCATCCCAAGTGGGAACCGCAACACAGGTGGGCTCGGTGGCGGAGAGGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp CTTCTCGGGGGTGCTGATGGCCCGCTTGGTCACGTGCTCAATCTCGCCATTCGAGGGCTCCTGCCTGCCTaGACACTGGTGGGAGGCGCT +
Preference number: 4 (lower is better)
Translates to: LLGGADGPLGHVLNLAIRGLLPA*TLVGGA
Trigger: AGCGCCTCCCACCAGTGTCCAGGCAGGCAGGAGCCC...TCGAATGGCGAGATTGAGCACGTGACCAAGCGGGCCATCAGCACCCCCGAGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp TCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATTCCACTCCCGCAACGCCACCATaGTCCCAGGGCACCGGCTCG +
Preference number: 4 (lower is better)
Translates to: SCCRLECLYSWRETAHSTPATPP*SQGTGS
Trigger: CGAGCCGGTGCCCTGGGATCATGGTGGCGTTGCGGG...AGTGGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp CTTCTCGGGGGTGCTGATGGCCCGCTTGGTCACGTGCTCAATCTCGCCATTCGACAGTTCTGTAGGGACTaGGCGGCACGCGTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: LLGGADGPLGHVLNLAIRQFCRD*AARVGP
Trigger: TGGGCCCACGCGTGCCGCGCAGTCCCTACAGAACTG...TCGAATGGCGAGATTGAGCACGTGACCAAGCGGGCCATCAGCACCCCCGAGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534532.6
CDS-3UTR GCA 90 bp GCGCCTCTCCGCCACCGAGCCCACCTGTGTTGCGGTTCCCACTTGGGATGGCAGCCCTTAACAGAGGGCTaGACAAATCGGCAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: APLRHRAHLCCGSHLGWQPLTEG*TNRQCC
Trigger: GCAGCACTGCCGATTTGTGCAGCCCTCTGTTAAGGG...CTGCCATCCCAAGTGGGAACCGCAACACAGGTGGGCTCGGTGGCGGAGAGGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp GCGCCTCTCCGCCACCGAGCCCACCTGTGTTGCGGTTCCCACTTGGGATGGCAGCTGAGAGTAACTCACTaGCGTCCAGGTCCAGGGGTA +
Preference number: 4 (lower is better)
Translates to: APLRHRAHLCCGSHLGWQLRVTH*RPGPGV
Trigger: TACCCCTGGACCTGGACGCCAGTGAGTTACTCTCAG...CTGCCATCCCAAGTGGGAACCGCAACACAGGTGGGCTCGGTGGCGGAGAGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp GTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTACCCGCAACGCCACCATaGTCCCAGGGCACCGGCTCG +
Preference number: 4 (lower is better)
Translates to: VFRGVFRRDLLLQAGVSLPATPP*SQGTGS
Trigger: CGAGCCGGTGCCCTGGGATCATGGTGGCGTTGCGGG...TAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp GAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATGCCATCAGCAAAGCACAGCGGACACCAGGGCTaGAGGCCGCTACCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: ESNSLASRSRGRMPSAKHSGHQG*RPLPRP
Trigger: GGGCCTTGGTAGCGGCCTGCAGCCCTGGTGTCCGCT...GTGCTTTGCTGATGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp CTTCTCGGGGGTGCTGATGGCCCGCTTGGTCACGTGCTCAATCTCGCCATTCGATCAAGGGCTCCTGCCTaGCTGGACACTGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LLGGADGPLGHVLNLAIRSRAPA*LDTGGR
Trigger: CCTCCCACCAGTGTCCAGGCAGGCAGGAGCCCTTGA...TCGAATGGCGAGATTGAGCACGTGACCAAGCGGGCCATCAGCACCCCCGAGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp GACAGCCACGTCCTCACACACCTCGAGCTCTCGCACCAGGGCTGGGATGCTCTTCGGAGGACACGAGACTaGTTCCTCAAGGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: DSHVLTHLELSHQGWDALRRTRD*FLKGSC
Trigger: GCAGGAGCCCTTGAGGAAGCAGTCTCGTGTCCTCCG...AAGAGCATCCCAGCCCTGGTGCGAGAGCTCGAGGTGTGTGAGGACGTGGCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR GCA 90 bp CTTGGGCCCTGGCAGTGGCTGTGTCCCAGTGAGCTTTACTCACGTGGCCCTTGCCGGAGGACACGAGACTaGTTCCTCAAGGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LGPWQWLCPSELYSRGPCRRTRD*FLKGSC
Trigger: GCAGGAGCCCTTGAGGAAGCAGTCTCGTGTCCTCCG...GCAAGGGCCACGTGAGTAAAGCTCACTGGGACACAGCCACTGCCAGGGCCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp TGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCACTGCGCGGCACGCGTaGGCCCAGAGCCTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: CLVGCFQRGLSEGPPAAGTARHA*AQSLSQ
Trigger: CTGGGACAGGCTCTGGGCCCACGCGTGCCGCGCAGT...GCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534532.6
CDS-3UTR CCA 90 bp GTGTGCTCAAGAGCAGTGCTGCGCCTCTCCGCCACCGAGCCCACCTGTGTTGCGCGCAACCAGGCTTTCTaGATCTGCACGCATCTAGGC +
Preference number: 4 (lower is better)
Translates to: VCSRAVLRLSATEPTCVARNQAF*ICTHLG
Trigger: GCCTAGATGCGTGCAGATCCAGAAAGCCTGGTTGCG...CGCAACACAGGTGGGCTCGGTGGCGGAGAGGCGCAGCACTGCTCTTGAGCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp CTTGGGCCCTGGCAGTGGCTGTGTCCCAGTGAGCTTTACTCACGTGGCCCTTGCCTCCCGGGGTTAGCCTaGGAGCTCTTAGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: LGPWQWLCPSELYSRGPCLPGLA*ELLGCS
Trigger: AGAACAGCCTAAGAGCTCTCAGGCTAACCCCGGGAG...GCAAGGGCCACGTGAGTAAAGCTCACTGGGACACAGCCACTGCCAGGGCCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp TGGCGGCCAGTCCAGCCTTTTAAAGAACGTCAGGTGGAGCAGCCAGGTGAAAGGTCTGCCAGGAGGCCCTaGCATCCTTGGGCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: WRPVQPFKERQVEQPGERSARRP*HPWALA
Trigger: TGCCAGGGCCCAAGGATGGCAGGGCCTCCTGGCAGA...CCTTTCACCTGGCTGCTCCACCTGACGTTCTTTAAAAGGCTGGACTGGCCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp CTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGAGGCTCGCCGCCGCCGTaGTCAACTTTCAAAGCTCGC +
Preference number: 4 (lower is better)
Translates to: LSEGPPAAGWSVFIPGGRGSPPP*STFKAR
Trigger: GCGAGCTTTGAAAGTTGAGCACGGCGGCGGCGAGCC...TCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp GATGACGTTGTTGCGGACAGCCACGTCCTCACACACCTCGAGCTCTCGCACCAGCTTCCGGACAGACACTaGAGGGTCCCGACACTGGTC +
Preference number: 4 (lower is better)
Translates to: DDVVADSHVLTHLELSHQLPDRH*RVPTLV
Trigger: GACCAGTGTCGGGACCCTGCAGTGTCTGTCCGGAAG...CTGGTGCGAGAGCTCGAGGTGTGTGAGGACGTGGCTGTCCGCAACAACGTCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR GCA 90 bp GCTCAGGGACATGGGCCTGGCTTTGGGCAGCAACCTCTGCAATGGCCCTGTTTCTACATGGCCAGCACTTaGCCTGGGTGTGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: AQGHGPGFGQQPLQWPCFYMAST*PGCAGL
Trigger: CAGCCCTGCACACCCAGGGCAAGTGCTGGCCATGTA...GAAACAGGGCCATTGCAGAGGTTGCTGCCCAAAGCCAGGCCCATGTCCCTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp GGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATGCAGGGTCCCGACACTaGTCCTGCAGAATCCACAGG +
Preference number: 4 (lower is better)
Translates to: GTSCCRLECLYSWRETAHAGSRH*SCRIHR
Trigger: CCTGTGGATTCTGCAGGACCAGTGTCGGGACCCTGC...ATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp GACAGCCACGTCCTCACACACCTCGAGCTCTCGCACCAGGGCTGGGATGCTCTTCTCTCGCACCAGGGCTaGGATGCTCTTCTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: DSHVLTHLELSHQGWDALLSHQG*DALLCQ
Trigger: CTGGCAAAGAAGAGCATCCCAGCCCTGGTGCGAGAG...AAGAGCATCCCAGCCCTGGTGCGAGAGCTCGAGGTGTGTGAGGACGTGGCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR CCA 90 bp CTTGGGCCCTGGCAGTGGCTGTGTCCCAGTGAGCTTTACTCACGTGGCCCTTGCCTCTCGCACCAGGGCTaGGATGCTCTTCTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: LGPWQWLCPSELYSRGPCLSHQG*DALLCQ
Trigger: CTGGCAAAGAAGAGCATCCCAGCCCTGGTGCGAGAG...GCAAGGGCCACGTGAGTAAAGCTCACTGGGACACAGCCACTGCCAGGGCCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp GGTGCCACCTCAGCACCTCCAGCCGTCCCGGCCACATCTGCATGTTTTGCTAGCTCAGGGACATGGGCCTaGCTTTGGGCAGCAACCTCT +
Preference number: 4 (lower is better)
Translates to: GATSAPPAVPATSACFASSGTWA*LWAATS
Trigger: AGAGGTTGCTGCCCAAAGCCAGGCCCATGTCCCTGA...GCTAGCAAAACATGCAGATGTGGCCGGGACGGCTGGAGGTGCTGAGGTGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp GCGCCTCTCCGCCACCGAGCCCACCTGTGTTGCGGTTCCCACTTGGGATGGCAGCACTGCTCCCATTTGTaGGGGGACATTAGCAACATC +
Preference number: 4 (lower is better)
Translates to: APLRHRAHLCCGSHLGWQHCSHL*GDISNI
Trigger: GATGTTGCTAATGTCCCCCCACAAATGGGAGCAGTG...CTGCCATCCCAAGTGGGAACCGCAACACAGGTGGGCTCGGTGGCGGAGAGGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CAA 72 bp CAGCACCTCCAGCCGTCCCGGCCACATCTGCATGTTTaGCTAGCTCCTGCTCCTGGACCAGCTGTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: QHLQPSRPHLHV*LAPAPGPAVPG
Trigger: ACCAGGAACAGCTGGTCCAGGAGCAGGAGCTAGCAAAACATGCAGATGTGGCCGGGACGGCTGGAGGTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp ACTGGTGTCTTCCATGTAGCGTCCCAGCTTTGGGCTCCTGTAACAGACCTCTTTCCCGCAACGCCACCATaGTCCCAGGGCACCGGCTCG +
Preference number: 4 (lower is better)
Translates to: TGVFHVASQLWAPVTDLFPATPP*SQGTGS
Trigger: CGAGCCGGTGCCCTGGGATCATGGTGGCGTTGCGGG...AAAGAGGTCTGTTACAGGAGCCCAAAGCTGGGACGCTACATGGAAGACACCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp GATGACGTTGTTGCGGACAGCCACGTCCTCACACACCTCGAGCTCTCGCACCAGCTCCCGGGGTTAGCCTaGGAGCTCTTAGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: DDVVADSHVLTHLELSHQLPGLA*ELLGCS
Trigger: AGAACAGCCTAAGAGCTCTCAGGCTAACCCCGGGAG...CTGGTGCGAGAGCTCGAGGTGTGTGAGGACGTGGCTGTCCGCAACAACGTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR TCA 90 bp GGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGTAGTCCAGCCTGGGTaGGGAGCCAGCAATCTTGGA +
Preference number: 4 (lower is better)
Translates to: GVFRRDLLLQAGVSLFLAVVQPG*GASNLG
Trigger: TCCAAGATTGCTGGCTCCTCACCCAGGCTGGACTAC...CGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp TGGTGGGAGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCTTCTCGGGGGTGCTaGTGGCCCGCTTGGTCACGT +
Preference number: 4 (lower is better)
Translates to: WWEALFSWLFSEGSFGGTSSRGC*WPAWSR
Trigger: ACGTGACCAAGCGGGCCATCAGCACCCCCGAGAAGA...GGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCTCCCACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp GGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATAAGGACTGCGGGAAGTaGTCCAGCTGCCTTCACACG +
Preference number: 4 (lower is better)
Translates to: GTSCCRLECLYSWRETAHKDCGK*SSCLHT
Trigger: CGTGTGAAGGCAGCTGGATCACTTCCCGCAGTCCTT...ATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534532.6
CDS-3UTR GCA 90 bp CCTCCAGCCGTCCCGGCCACATCTGCATGTTTTGCTAGCTCCTGCTCCTGGACCAAGCTCCGACTCCGATaGCTGCTCTTTGACTCCACG +
Preference number: 4 (lower is better)
Translates to: PPAVPATSACFASSCSWTKLRLR*LLFDST
Trigger: CGTGGAGTCAAAGAGCAGGCATCGGAGTCGGAGCTT...GGTCCAGGAGCAGGAGCTAGCAAAACATGCAGATGTGGCCGGGACGGCTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp ATGGAGTGGCGGCCAGTCCAGCCTTTTAAAGAACGTCAGGTGGAGCAGCCAGGTTGTTGCCTCGCTGTCTaGCAGGAGGCCCTGCCATCC +
Preference number: 4 (lower is better)
Translates to: MEWRPVQPFKERQVEQPGCCLAV*QEALPS
Trigger: GGATGGCAGGGCCTCCTGGCAGACAGCGAGGCAACA...ACCTGGCTGCTCCACCTGACGTTCTTTAAAAGGCTGGACTGGCCGCCACTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp GTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTACAGCGAGGTAGCAGCTaGCATGCCGACCGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: VFRGVFRRDLLLQAGVSLQRGSS*HADRWS
Trigger: GCTCCAGCGGTCGGCATGGCAGCTGCTACCTCGCTG...TAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534532.6
CDS-3UTR GCA 90 bp CCTCCAGCCGTCCCGGCCACATCTGCATGTTTTGCTAGCTCCTGCTCCTGGACCGCCAAACAAGGCTCCTaGGGGTGTTCCGCTAATTCG +
Preference number: 4 (lower is better)
Translates to: PPAVPATSACFASSCSWTAKQGS*GCSANS
Trigger: CGAATTAGCGGAACACCCGCAGGAGCCTTGTTTGGC...GGTCCAGGAGCAGGAGCTAGCAAAACATGCAGATGTGGCCGGGACGGCTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp CTTGGGCCCTGGCAGTGGCTGTGTCCCAGTGAGCTTTACTCACGTGGCCCTTGCCCTTCTCCTGCACAGTaGTCTCGCAGTCCATCACCA +
Preference number: 4 (lower is better)
Translates to: LGPWQWLCPSELYSRGPCPSPAQ*SRSPSP
Trigger: TGGTGATGGACTGCGAGAGCACTGTGCAGGAGAAGG...GCAAGGGCCACGTGAGTAAAGCTCACTGGGACACAGCCACTGCCAGGGCCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp TCGTGTTCCACAGCAAAGCGCTGCCCAAGGACTGCGGGAAGTGATCCAGCTGCCCAGCATCCAGGCAGGTaGCGAATGTTCCGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: SCSTAKRCPRTAGSDPAAQHPGR*RMFRAS
Trigger: ACTGGCACGGAACATTCGGCACCTGCCTGGATGCTG...GGCAGCTGGATCACTTCCCGCAGTCCTTGGGCAGCGCTTTGCTGTGGAACACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534532.6
ENST00000534548.7
CDS-3UTR GCA 90 bp TCGTGTTCCACAGCAAAGCGCTGCCCAAGGACTGCGGGAAGTGATCCAGCTGCCGGTCCAGGGGTAGGATaGCATCAGCAAAGCACGCCA +
Preference number: 4 (lower is better)
Translates to: SCSTAKRCPRTAGSDPAAGPGVG*HQQSTP
Trigger: TGGCGTGCTTTGCTGATGGCATCCTACCCCTGGACC...GGCAGCTGGATCACTTCCCGCAGTCCTTGGGCAGCGCTTTGCTGTGGAACACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534532.6
ENST00000534548.7
CDS-3UTR GCA 90 bp AAGGGCTCCTGCCTGCCTGGACACTGGTGGGAGGCGCTGTTTAGTTGGCTGTTTACACAGGGCAACCTGTaGCACAGGTGCCACCTCAGC +
Preference number: 4 (lower is better)
Translates to: KGSCLPGHWWEALFSWLFTQGNL*HRCHLS
Trigger: GCTGAGGTGGCACCTGTGGCACAGGTTGCCCTGTGT...AAACAGCCAACTAAACAGCGCCTCCCACCAGTGTCCAGGCAGGCAGGAGCCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp GGTGCCACCTCAGCACCTCCAGCCGTCCCGGCCACATCTGCATGTTTTGCTAGCTCAGGATTGCAATGGTaGTCAGGGACATGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GATSAPPAVPATSACFASSGLQW*SGTWAW
Trigger: CCAGGCCCATGTCCCTGAGCACCATTGCAATCCTGA...GCTAGCAAAACATGCAGATGTGGCCGGGACGGCTGGAGGTGCTGAGGTGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp GAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATGCCATCAGCAAAGCACTCAAGGGCTCCTGCCTaGCTGGACACTGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: ESNSLASRSRGRMPSAKHSRAPA*LDTGGR
Trigger: CCTCCCACCAGTGTCCAGGCAGGCAGGAGCCCTTGA...GTGCTTTGCTGATGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp GCTGTTCCCCCATCATGGGAGCAGCCCTTAACAGAGGGCTGCACAAATCGGCAGGGAGGTCAGCCTGTGTaGTCAAGAGCAGTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: AVPPSWEQPLTEGCTNRQGGQPV*SRAVLR
Trigger: GCGCAGCACTGCTCTTGAGCACACAGGCTGACCTCC...CTGCCGATTTGTGCAGCCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp GCGCCTCTCCGCCACCGAGCCCACCTGTGTTGCGGTTCCCACTTGGGATGGCAGTCTCTGCTTCTATGCTaGGATCCAAAGGCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: APLRHRAHLCCGSHLGWQSLLLC*DPKAQS
Trigger: AGACTGAGCCTTTGGATCCCAGCATAGAAGCAGAGA...CTGCCATCCCAAGTGGGAACCGCAACACAGGTGGGCTCGGTGGCGGAGAGGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp TCGTGTTCCACAGCAAAGCGCTGCCCAAGGACTGCGGGAAGTGATCCAGCTGCCGCACGCTCAGAGAACTaGGCGGGCCGAAAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: SCSTAKRCPRTAGSDPAAARSEN*AGRKVE
Trigger: TTCCACTTTTCGGCCCGCCCAGTTCTCTGAGCGTGC...GGCAGCTGGATCACTTCCCGCAGTCCTTGGGCAGCGCTTTGCTGTGGAACACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534532.6
CDS-3UTR CCA 90 bp GGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGCTAGCTCCTGCTCCTaGACCAGCTGTTCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: GVFRRDLLLQAGVSLFLAASSCS*TSCSWY
Trigger: GTACCAGGAACAGCTGGTCCAGGAGCAGGAGCTAGC...CGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp GCGCCTCTCCGCCACCGAGCCCACCTGTGTTGCGGTTCCCACTTGGGATGGCAGAGTAAAAACCCGGTGTaGGATCTTGGAACTTCGGGA +
Preference number: 4 (lower is better)
Translates to: APLRHRAHLCCGSHLGWQSKNPV*DLGTSG
Trigger: TCCCGAAGTTCCAAGATCCCACACCGGGTTTTTACT...CTGCCATCCCAAGTGGGAACCGCAACACAGGTGGGCTCGGTGGCGGAGAGGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp CTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGAGCAGGGTCCCGACACTaGTCCTGCAGAATCCACAGG +
Preference number: 4 (lower is better)
Translates to: LSEGPPAAGWSVFIPGGRAGSRH*SCRIHR
Trigger: CCTGTGGATTCTGCAGGACCAGTGTCGGGACCCTGC...TCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp CCTCCAGCCGTCCCGGCCACATCTGCATGTTTTGCTAGCTCCTGCTCCTGGACCCGCAACCAGGCTTTCTaGATCTGCACGCATCTAGGC +
Preference number: 4 (lower is better)
Translates to: PPAVPATSACFASSCSWTRNQAF*ICTHLG
Trigger: GCCTAGATGCGTGCAGATCCAGAAAGCCTGGTTGCG...GGTCCAGGAGCAGGAGCTAGCAAAACATGCAGATGTGGCCGGGACGGCTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp AGGGATGGCTCCCCACCCTCAGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGAGGAGCCAGCAATCTTaGAGAGCAGCATCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: RDGSPPSALGIHAPASFLRSQQS*RAASRQ
Trigger: CTGCCTGGATGCTGCTCTCCAAGATTGCTGGCTCCT...CAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCTGAGGGTGGGGAGCCATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp GGCAGCACTCCTAAGCTCCGACTCCGATGCCTGCTCTTTGACTCCACGGCTTTCGGCGGTGCTCGCAGGTaGAGAGTACATCCCCACACA +
Preference number: 4 (lower is better)
Translates to: GSTPKLRLRCLLFDSTAFGGARR*RVHPHT
Trigger: TGTGTGGGGATGTACTCTCCACCTGCGAGCACCGCC...GAAAGCCGTGGAGTCAAAGAGCAGGCATCGGAGTCGGAGCTTAGGAGTGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp GCTGTTCCCCCATCATGGGAGCAGCCCTTAACAGAGGGCTGCACAAATCGGCAGTGCGCTTCTCCACCCTaGCTGGACACAGCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: AVPPSWEQPLTEGCTNRQCASPP*LDTAGL
Trigger: TAGCCCAGCTGTGTCCAGCCAGGGTGGAGAAGCGCA...CTGCCGATTTGTGCAGCCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp TGTCTGAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATGCCATCAGCAAGGGTGGCTGAGACGCTaGGGCCTCACTGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: CLRVTHWRPGPGVGCHQQGWLRR*GLTAAL
Trigger: CAAGGCAGCAGTGAGGCCCCAGCGTCTCAGCCACCC...TTGCTGATGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp TGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCGGCCAGCACTTGCCCTaGGTGTGCAGGGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: CLVGCFQRGLSEGPPAAGGQHLP*VCRAGS
Trigger: TGAGCCAGCCCTGCACACCCAGGGCAAGTGCTGGCC...GCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp CTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCACTGCTGAGGCTGTaGGGGCGGTTTATCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LSEGPPAAGWSVFIPGGRPLLRL*GRFIRQ
Trigger: CTGCCTGATAAACCGCCCCCACAGCCTCAGCAGTGG...TCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp CTTCTCGGGGGTGCTGATGGCCCGCTTGGTCACGTGCTCAATCTCGCCATTCGACTGCCTGGACACTGGTaGGAGGCGCTGTTTAGTTGG +
Preference number: 4 (lower is better)
Translates to: LLGGADGPLGHVLNLAIRLPGHW*EALFSW
Trigger: CCAACTAAACAGCGCCTCCCACCAGTGTCCAGGCAG...TCGAATGGCGAGATTGAGCACGTGACCAAGCGGGCCATCAGCACCCCCGAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp TCGTGTTCCACAGCAAAGCGCTGCCCAAGGACTGCGGGAAGTGATCCAGCTGCCCTGCCTGGACACTGGTaGGAGGCGCTGTTTAGTTGG +
Preference number: 4 (lower is better)
Translates to: SCSTAKRCPRTAGSDPAALPGHW*EALFSW
Trigger: CCAACTAAACAGCGCCTCCCACCAGTGTCCAGGCAG...GGCAGCTGGATCACTTCCCGCAGTCCTTGGGCAGCGCTTTGCTGTGGAACACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534532.6
ENST00000534548.7
CDS-3UTR CCA 90 bp CGAGGCCGATACGAGGCTGTGATTCTGCCTTTGGATGGATGTTGCTGTACACAGGGGCTCCTGCCTGCCTaGACACTGGTGGGAGGCGCT +
Preference number: 4 (lower is better)
Translates to: RGRYEAVILPLDGCCCTQGLLPA*TLVGGA
Trigger: AGCGCCTCCCACCAGTGTCCAGGCAGGCAGGAGCCC...CTGTGTACAGCAACATCCATCCAAAGGCAGAATCACAGCCTCGTATCGGCCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp TCGTGTTCCACAGCAAAGCGCTGCCCAAGGACTGCGGGAAGTGATCCAGCTGCCCTTGGTAGAGAGGGATaGCTCCCCACCCTCAGCGTT +
Preference number: 4 (lower is better)
Translates to: SCSTAKRCPRTAGSDPAALGREG*LPTLSV
Trigger: AACGCTGAGGGTGGGGAGCCATCCCTCTCTACCAAG...GGCAGCTGGATCACTTCCCGCAGTCCTTGGGCAGCGCTTTGCTGTGGAACACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp AAGTCGTTCTGCAAAAGTGTGGGGGATGGGCTGGCACAGTTAACATCAGAAAGCCCCGCAACGCCACCATaGTCCCAGGGCACCGGCTCG +
Preference number: 4 (lower is better)
Translates to: KSFCKSVGDGLAQLTSESPATPP*SQGTGS
Trigger: CGAGCCGGTGCCCTGGGATCATGGTGGCGTTGCGGG...GCTTTCTGATGTTAACTGTGCCAGCCCATCCCCCACACTTTTGCAGAACGACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526422.2
CDS-3UTR TCA 90 bp GCTGTTCCCCCATCATGGGAGCAGCCCTTAACAGAGGGCTGCACAAATCGGCAGGTAGTCCAGCCTGGGTaGGGAGCCAGCAATCTTGGA +
Preference number: 4 (lower is better)
Translates to: AVPPSWEQPLTEGCTNRQVVQPG*GASNLG
Trigger: TCCAAGATTGCTGGCTCCTCACCCAGGCTGGACTAC...CTGCCGATTTGTGCAGCCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp GTGTGCTCAAGAGCAGTGCTGCGCCTCTCCGCCACCGAGCCCACCTGTGTTGCGAATCGATCAGAGTGCTaGCAAATCGGAAGAACAGGG +
Preference number: 4 (lower is better)
Translates to: VCSRAVLRLSATEPTCVANRSEC*QIGRTG
Trigger: CCCTGTTCTTCCGATTTGTCAGCACTCTGATCGATT...CGCAACACAGGTGGGCTCGGTGGCGGAGAGGCGCAGCACTGCTCTTGAGCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp AGGGATGGCTCCCCACCCTCAGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGGGCAATGTCTGGGTGTaGATCGATCAGAGTGCTGAC +
Preference number: 4 (lower is better)
Translates to: RDGSPPSALGIHAPASFLGNVWV*IDQSAD
Trigger: GTCAGCACTCTGATCGATTCACACCCAGACATTGCC...CAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCTGAGGGTGGGGAGCCATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp TCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATTCCACTCGCACATTCCACTGCTaGGGCTGTGGGGGCGGTTTA +
Preference number: 4 (lower is better)
Translates to: SCCRLECLYSWRETAHSTRTFHC*GCGGGL
Trigger: TAAACCGCCCCCACAGCCTCAGCAGTGGAATGTGCG...AGTGGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp TGGCGGCCAGTCCAGCCTTTTAAAGAACGTCAGGTGGAGCAGCCAGGTGAAAGGCGCACATTCCACTGCTaGGGCTGTGGGGGCGGTTTA +
Preference number: 4 (lower is better)
Translates to: WRPVQPFKERQVEQPGERRTFHC*GCGGGL
Trigger: TAAACCGCCCCCACAGCCTCAGCAGTGGAATGTGCG...CCTTTCACCTGGCTGCTCCACCTGACGTTCTTTAAAAGGCTGGACTGGCCGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp CTTGGGCCCTGGCAGTGGCTGTGTCCCAGTGAGCTTTACTCACGTGGCCCTTGCGCCGATACGAGGCTGTaGTTCTGCCTTTGGATGGAT +
Preference number: 4 (lower is better)
Translates to: LGPWQWLCPSELYSRGPCADTRL*FCLWMD
Trigger: ATCCATCCAAAGGCAGAATCACAGCCTCGTATCGGC...GCAAGGGCCACGTGAGTAAAGCTCACTGGGACACAGCCACTGCCAGGGCCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp AGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGGTTGTCATAGTGATAGGGTAAGCGGACACCAGGGCTaGAGGCCGCTACCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: SVGDSRSSLLLGCHSDRVSGHQG*RPLPRP
Trigger: GGGCCTTGGTAGCGGCCTGCAGCCCTGGTGTCCGCT...TACCCTATCACTATGACAACCAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp CAGCCGTCCCGGCCACATCTGCATGTTTTGCTAGCTCCTGCTCCTGGACCAGCTATGTTGGAGAGGCGGTaGTCGCAGGTGGAGAGTACA +
Preference number: 4 (lower is better)
Translates to: QPSRPHLHVLLAPAPGPAMLERR*SQVEST
Trigger: TGTACTCTCCACCTGCGAGCACCGCCTCTCCAACAT...AGCTGGTCCAGGAGCAGGAGCTAGCAAAACATGCAGATGTGGCCGGGACGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp TCGTGTTCCACAGCAAAGCGCTGCCCAAGGACTGCGGGAAGTGATCCAGCTGCCGCACCAGGGCTGGGATaGTCTTCTTTGCCAGATCCT +
Preference number: 4 (lower is better)
Translates to: SCSTAKRCPRTAGSDPAAAPGLG*SSLPDP
Trigger: AGGATCTGGCAAAGAAGAGCATCCCAGCCCTGGTGC...GGCAGCTGGATCACTTCCCGCAGTCCTTGGGCAGCGCTTTGCTGTGGAACACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534532.6
ENST00000534548.7
CDS-3UTR GCA 90 bp TTCCTCATAGGCTCTCATGACAATGTAACCACCGTCCTAATGGCCCTGGGCCAGCACTTGCCCTGGGTGTaGAGGGCTGGCTCACGGCAG +
Preference number: 4 (lower is better)
Translates to: FLIGSHDNVTTVLMALGQHLPWV*RAGSRQ
Trigger: CTGCCGTGAGCCAGCCCTGCACACCCAGGGCAAGTG...CTGGCCCAGGGCCATTAGGACGGTGGTTACATTGTCATGAGAGCCTATGAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR GCA 90 bp GGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATGGAGGGACCTCCTGCTaGAGGCTGGAGTGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: GTSCCRLECLYSWRETAHGGTSC*RLECLY
Trigger: ATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCC...ATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp GGTGGGAGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTTTCCTCAAGGGCTCCTaGCTGCCTGGACACTGGTGG +
Preference number: 4 (lower is better)
Translates to: GGRRCLVGCFQRGLSEGPFLKGS*LPGHWW
Trigger: CCACCAGTGTCCAGGCAGGCAGGAGCCCTTGAGGAA...AGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCTCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp GCTGTTCCCCCATCATGGGAGCAGCCCTTAACAGAGGGCTGCACAAATCGGCAGTGCACAAATCGGCAGTaGTGCTCTGGGGAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: AVPPSWEQPLTEGCTNRQCTNRQ*CSGEGC
Trigger: GCAGCCTTCCCCAGAGCAGCACTGCCGATTTGTGCA...CTGCCGATTTGTGCAGCCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp GCTGTTCCCCCATCATGGGAGCAGCCCTTAACAGAGGGCTGCACAAATCGGCAGGTGCTCCCTGGTGTCTaGTGCATGGCATCCTGGATG +
Preference number: 4 (lower is better)
Translates to: AVPPSWEQPLTEGCTNRQVLPGV*CMASWM
Trigger: CATCCAGGATGCCATGCAGCAGACACCAGGGAGCAC...CTGCCGATTTGTGCAGCCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp TGGCGGCCAGTCCAGCCTTTTAAAGAACGTCAGGTGGAGCAGCCAGGTGAAAGGCAGCCTCACATGCCCTaGCGTGCTGGACTCAGGACT +
Preference number: 4 (lower is better)
Translates to: WRPVQPFKERQVEQPGERQPHMP*RAGLRT
Trigger: AGTCCTGAGTCCAGCACGGCAGGGCATGTGAGGCTG...CCTTTCACCTGGCTGCTCCACCTGACGTTCTTTAAAAGGCTGGACTGGCCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp CAGCCGTCCCGGCCACATCTGCATGTTTTGCTAGCTCCTGCTCCTGGACCAGCTGACAGTGTGCAAAGCTaGACAGTGCCTTGCTGCGGA +
Preference number: 4 (lower is better)
Translates to: QPSRPHLHVLLAPAPGPADSVQS*TVPCCG
Trigger: TCCGCAGCAAGGCACTGTCCAGCTTTGCACACTGTC...AGCTGGTCCAGGAGCAGGAGCTAGCAAAACATGCAGATGTGGCCGGGACGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp CAGCCGTCCCGGCCACATCTGCATGTTTTGCTAGCTCCTGCTCCTGGACCAGCTTGCTGTAGTCCAGCCTaGGTGAGGAGCCAGCAATCT +
Preference number: 4 (lower is better)
Translates to: QPSRPHLHVLLAPAPGPACCSPA*VRSQQS
Trigger: AGATTGCTGGCTCCTCACCCAGGCTGGACTACAGCA...AGCTGGTCCAGGAGCAGGAGCTAGCAAAACATGCAGATGTGGCCGGGACGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp TCGTGTTCCACAGCAAAGCGCTGCCCAAGGACTGCGGGAAGTGATCCAGCTGCCTGCTGTAGTCCAGCCTaGGTGAGGAGCCAGCAATCT +
Preference number: 4 (lower is better)
Translates to: SCSTAKRCPRTAGSDPAACCSPA*VRSQQS
Trigger: AGATTGCTGGCTCCTCACCCAGGCTGGACTACAGCA...GGCAGCTGGATCACTTCCCGCAGTCCTTGGGCAGCGCTTTGCTGTGGAACACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534532.6
ENST00000534548.7
CDS-3UTR CCA 90 bp GAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATGCCATCAGCAAAGCACGGCGGTGCTCGCAGGTaGAGAGTACATCCCCACACA +
Preference number: 4 (lower is better)
Translates to: ESNSLASRSRGRMPSAKHGGARR*RVHPHT
Trigger: TGTGTGGGGATGTACTCTCCACCTGCGAGCACCGCC...GTGCTTTGCTGATGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp CACTGTTCCTCTTTGCCACAGAGAAAGCACCCAGACGCCACAGGCTCTGTCGCAGGCGGTGCTCGCAGGTaGAGAGTACATCCCCACACA +
Preference number: 4 (lower is better)
Translates to: HCSSLPQRKHPDATGSVAGGARR*RVHPHT
Trigger: TGTGTGGGGATGTACTCTCCACCTGCGAGCACCGCC...TGCGACAGAGCCTGTGGCGTCTGGGTGCTTTCTCTGTGGCAAAGAGGAACAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp TCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATTCCACTTGCGCTTCTCCACCCTaGCTGGACACAGCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: SCCRLECLYSWRETAHSTCASPP*LDTAGL
Trigger: TAGCCCAGCTGTGTCCAGCCAGGGTGGAGAAGCGCA...AGTGGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp TGTCTGAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATGCCATCAGCAACTGGGTGTGCAGGGCTaGCTCACGGCAGGTGACATG +
Preference number: 4 (lower is better)
Translates to: CLRVTHWRPGPGVGCHQQLGVQG*LTAGDM
Trigger: CATGTCACCTGCCGTGAGCCAGCCCTGCACACCCAG...TTGCTGATGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTCAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp TTCCTCATAGGCTCTCATGACAATGTAACCACCGTCCTAATGGCCCTGGGCCAGGGCCAGCACTTGCCCTaGGTGTGCAGGGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: FLIGSHDNVTTVLMALGQGQHLP*VCRAGS
Trigger: TGAGCCAGCCCTGCACACCCAGGGCAAGTGCTGGCC...CTGGCCCAGGGCCATTAGGACGGTGGTTACATTGTCATGAGAGCCTATGAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR CCA 90 bp CCCTCAGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGGTTGTCATAGTGATAGGCCAGCACTTGCCCTaGGTGTGCAGGGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: PSALGIHAPASFLVVIVIGQHLP*VCRAGS
Trigger: TGAGCCAGCCCTGCACACCCAGGGCAAGTGCTGGCC...TATCACTATGACAACCAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCTGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp CCTCCAGCCGTCCCGGCCACATCTGCATGTTTTGCTAGCTCCTGCTCCTGGACCCAGCAACCTCTGCAATaGCCCTGTTTCAGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: PPAVPATSACFASSCSWTQQPLQ*PCFRCR
Trigger: CCTACACCTGAAACAGGGCCATTGCAGAGGTTGCTG...GGTCCAGGAGCAGGAGCTAGCAAAACATGCAGATGTGGCCGGGACGGCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp CTTGGGCCCTGGCAGTGGCTGTGTCCCAGTGAGCTTTACTCACGTGGCCCTTGCCAGCAACCTCTGCAATaGCCCTGTTTCAGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: LGPWQWLCPSELYSRGPCQQPLQ*PCFRCR
Trigger: CCTACACCTGAAACAGGGCCATTGCAGAGGTTGCTG...GCAAGGGCCACGTGAGTAAAGCTCACTGGGACACAGCCACTGCCAGGGCCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp GAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGTCAGGGACATGGGCCTaGCTTTGGGCAGCAACCTCT +
Preference number: 4 (lower is better)
Translates to: EGSFGGTSCCRLECLYSWSGTWA*LWAATS
Trigger: AGAGGTTGCTGCCCAAAGCCAGGCCCATGTCCCTGA...CCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp ATGGAGTGGCGGCCAGTCCAGCCTTTTAAAGAACGTCAGGTGGAGCAGCCAGGTTGGTGCTCAGGGACATaGGCCTGGCTTTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: MEWRPVQPFKERQVEQPGWCSGT*AWLWAA
Trigger: TGCTGCCCAAAGCCAGGCCCATGTCCCTGAGCACCA...ACCTGGCTGCTCCACCTGACGTTCTTTAAAAGGCTGGACTGGCCGCCACTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp GGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGCCTCCTGCTGCAGGCTaGAGTGTCTTTATTCCTGGC +
Preference number: 4 (lower is better)
Translates to: GVFRRDLLLQAGVSLFLAPPAAG*SVFIPG
Trigger: GCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGG...CGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp TCGTGTTCCACAGCAAAGCGCTGCCCAAGGACTGCGGGAAGTGATCCAGCTGCCCCTCCTGCTGCAGGCTaGAGTGTCTTTATTCCTGGC +
Preference number: 4 (lower is better)
Translates to: SCSTAKRCPRTAGSDPAAPPAAG*SVFIPG
Trigger: GCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGG...GGCAGCTGGATCACTTCCCGCAGTCCTTGGGCAGCGCTTTGCTGTGGAACACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534532.6
ENST00000534548.7
CDS-3UTR CCA 90 bp GCGCCTCTCCGCCACCGAGCCCACCTGTGTTGCGGTTCCCACTTGGGATGGCAGTCTACACTAGTGCCATaGGAACCAGGTCTGAAAAAG +
Preference number: 4 (lower is better)
Translates to: APLRHRAHLCCGSHLGWQSTLVP*EPGLKK
Trigger: CTTTTTCAGACCTGGTTCCCATGGCACTAGTGTAGA...CTGCCATCCCAAGTGGGAACCGCAACACAGGTGGGCTCGGTGGCGGAGAGGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp AGGGATGGCTCCCCACCCTCAGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGCTGTTCCATTCTCCTTaGGAACGATGTTGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: RDGSPPSALGIHAPASFLLFHSP*ERCWRG
Trigger: GCCTCTCCAACATCGTTCTCAAGGAGAATGGAACAG...CAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCTGAGGGTGGGGAGCCATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp CTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGAGAAGCCAGGACGGACTaGATCAGAAGGAAGATGCGC +
Preference number: 4 (lower is better)
Translates to: LSEGPPAAGWSVFIPGGREARTD*IRRKMR
Trigger: GCGCATCTTCCTTCTGATTCAGTCCGTCCTGGCTTC...TCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp TCGTGTTCCACAGCAAAGCGCTGCCCAAGGACTGCGGGAAGTGATCCAGCTGCCGTGTCTGCTTCCGGATaGATGGGTCGGAATCCTTCA +
Preference number: 4 (lower is better)
Translates to: SCSTAKRCPRTAGSDPAAVSASG*MGRNPS
Trigger: TGAAGGATTCCGACCCATTCATCCGGAAGCAGACAC...GGCAGCTGGATCACTTCCCGCAGTCCTTGGGCAGCGCTTTGCTGTGGAACACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534532.6
ENST00000534548.7
CDS-3UTR GCA 90 bp AAACGTGACATCACTGATGCTCTTCTCGGGGGTGCTGATGGCCCGCTTGGTCACGCCCGCTTGGTCACGTaGTCAATCTCGCCATTCGAC +
Preference number: 4 (lower is better)
Translates to: KRDITDALLGGADGPLGHARLVT*SISPFD
Trigger: GTCGAATGGCGAGATTGAGCACGTGACCAAGCGGGC...GTGACCAAGCGGGCCATCAGCACCCCCGAGAAGAGCATCAGTGATGTCACGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp AACATCACTCAGAAGCCTGTGTTCTTCAAGAGCAGGTGTTCTCAGCCTCACATGGTCAGCTCCTGGGGTTaGGCCAGGCGCCCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: NITQKPVFFKSRCSQPHMVSSWG*ARRPRS
Trigger: AGAGCGGGGGCGCCTGGCGCAACCCCAGGAGCTGAC...CATGTGAGGCTGAGAACACCTGCTCTTGAAGAACACAGGCTTCTGAGTGATGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp TGTTGCGGACAGCCACGTCCTCACACACCTCGAGCTCTCGCACCAGGGCTGGGATTGGCACAGATGTGCTaGAGTAAGATACGGACGACT +
Preference number: 4 (lower is better)
Translates to: CCGQPRPHTPRALAPGLGLAQMC*SKIRTT
Trigger: AGTCGTCCGTATCTTACTGCAGCACATCTGTGCCAA...TCCCAGCCCTGGTGCGAGAGCTCGAGGTGTGTGAGGACGTGGCTGTCCGCAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR GCA 90 bp CTTGGGCCCTGGCAGTGGCTGTGTCCCAGTGAGCTTTACTCACGTGGCCCTTGCACCTTGGCACAGATGTaGTGCAGTAAGATACGGACG +
Preference number: 4 (lower is better)
Translates to: LGPWQWLCPSELYSRGPCTLAQM*CSKIRT
Trigger: CGTCCGTATCTTACTGCAGCACATCTGTGCCAAGGT...GCAAGGGCCACGTGAGTAAAGCTCACTGGGACACAGCCACTGCCAGGGCCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp TCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGTGCAAAGCTGGACAGTaGCTTGCTGCGGACAGTAGG +
Preference number: 4 (lower is better)
Translates to: SFGGTSCCRLECLYSWRECKAGQ*LAADSR
Trigger: CCTACTGTCCGCAGCAAGGCACTGTCCAGCTTTGCA...CTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp TGTCTGAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATGCCATCAGCAACTTCCGGACAGACACTaGAGGGTCCCGACACTGGTC +
Preference number: 4 (lower is better)
Translates to: CLRVTHWRPGPGVGCHQQLPDRH*RVPTLV
Trigger: GACCAGTGTCGGGACCCTGCAGTGTCTGTCCGGAAG...TTGCTGATGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp AAACGTGACATCACTGATGCTCTTCTCGGGGGTGCTGATGGCCCGCTTGGTCACAGAGACTGGAGGGCCTaGTTCCGGACAGACACTGCA +
Preference number: 4 (lower is better)
Translates to: KRDITDALLGGADGPLGHRDWRA*FRTDTA
Trigger: TGCAGTGTCTGTCCGGAAGCAGGCCCTCCAGTCTCT...GTGACCAAGCGGGCCATCAGCACCCCCGAGAAGAGCATCAGTGATGTCACGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp GCGCCTCTCCGCCACCGAGCCCACCTGTGTTGCGGTTCCCACTTGGGATGGCAGAAGATTGTATTATTCTaGTGTAGTCCAGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: APLRHRAHLCCGSHLGWQKIVLF*CSPAWV
Trigger: CACCCAGGCTGGACTACAGCAGAATAATACAATCTT...CTGCCATCCCAAGTGGGAACCGCAACACAGGTGGGCTCGGTGGCGGAGAGGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp CTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACTGGGGCCTCACTGCTaGCTTGAGATGATGGTGAGT +
Preference number: 4 (lower is better)
Translates to: LSEGPPAAGWSVFIPGGRLGPHC*LEMMVS
Trigger: ACTCACCATCATCTCAAGGCAGCAGTGAGGCCCCAG...TCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp TCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATTCCACTGGTCCAGGGGTAGGATaGCATCAGCAAAGCACGCCA +
Preference number: 4 (lower is better)
Translates to: SCCRLECLYSWRETAHSTGPGVG*HQQSTP
Trigger: TGGCGTGCTTTGCTGATGGCATCCTACCCCTGGACC...AGTGGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp AGTGCTAACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCCTTAACCACTTGCCCTGGGTGTaGAGGGCTGGCTCACGGCAG +
Preference number: 4 (lower is better)
Translates to: SANRRDSSCSPIMGAALNHLPWV*RAGSRQ
Trigger: CTGCCGTGAGCCAGCCCTGCACACCCAGGGCAAGTG...GTTAAGGGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTTAGCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp TCGTGTTCCACAGCAAAGCGCTGCCCAAGGACTGCGGGAAGTGATCCAGCTGCCTTGGGCAGCAACCTCTaGAATGGCCCTGTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: SCSTAKRCPRTAGSDPAALGSNL*NGPVSG
Trigger: ACCTGAAACAGGGCCATTGCAGAGGTTGCTGCCCAA...GGCAGCTGGATCACTTCCCGCAGTCCTTGGGCAGCGCTTTGCTGTGGAACACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534532.6
ENST00000534548.7
CDS-3UTR GCA 90 bp GAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGTCAGGATTGCAATGGTaGTCAGGGACATGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: EGSFGGTSCCRLECLYSWSGLQW*SGTWAW
Trigger: CCAGGCCCATGTCCCTGAGCACCATTGCAATCCTGA...CCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp CCCACTAGTGCTAACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCTTCCTCAAGGGCTCCTaGCTGCCTGGACACTGGTGG +
Preference number: 4 (lower is better)
Translates to: PTSANRRDSSCSPIMGAAFLKGS*LPGHWW
Trigger: CCACCAGTGTCCAGGCAGGCAGGAGCCCTTGAGGAA...GGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTTAGCACTAGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp CCCACTAGTGCTAACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCCGAGCCCACCTGTGTTaGGGTTCCCACTTGGGATGG +
Preference number: 4 (lower is better)
Translates to: PTSANRRDSSCSPIMGAARAHLC*GSHLGW
Trigger: CCATCCCAAGTGGGAACCGCAACACAGGTGGGCTCG...GGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTTAGCACTAGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp AGGGATGGCTCCCCACCCTCAGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGGCATGGCATCCTGGATaGTTAGCATGCAAGTTCCCT +
Preference number: 4 (lower is better)
Translates to: RDGSPPSALGIHAPASFLAWHPG*LACKFP
Trigger: AGGGAACTTGCATGCTAAGCATCCAGGATGCCATGC...CAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCTGAGGGTGGGGAGCCATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp AAAGTCGTTCTGCAAAAGTGTGGGGGATGGGCTGGCACAGTTAACATCAGAAAGACTGCGCGGCACGCGTaGGCCCAGAGCCTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: KVVLQKCGGWAGTVNIRKTARHA*AQSLSQ
Trigger: CTGGGACAGGCTCTGGGCCCACGCGTGCCGCGCAGT...CTTTCTGATGTTAACTGTGCCAGCCCATCCCCCACACTTTTGCAGAACGACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526422.2
CDS-3UTR CCA 90 bp GCTCAGGGACATGGGCCTGGCTTTGGGCAGCAACCTCTGCAATGGCCCTGTTTCGCCGAGTCGTTCCTGTaGACCAATCACAACGTACAG +
Preference number: 4 (lower is better)
Translates to: AQGHGPGFGQQPLQWPCFAESFL*TNHNVQ
Trigger: CTGTACGTTGTGATTGGTCCACAGGAACGACTCGGC...GAAACAGGGCCATTGCAGAGGTTGCTGCCCAAAGCCAGGCCCATGTCCCTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp TCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGCTGAGAGTAACTCACTaGCGTCCAGGTCCAGGGGTA +
Preference number: 4 (lower is better)
Translates to: SFGGTSCCRLECLYSWRELRVTH*RPGPGV
Trigger: TACCCCTGGACCTGGACGCCAGTGAGTTACTCTCAG...CTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp ATGGAGTGGCGGCCAGTCCAGCCTTTTAAAGAACGTCAGGTGGAGCAGCCAGGTGCTAGCTCCTGCTCCTaGACCAGCTGTTCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: MEWRPVQPFKERQVEQPGASSCS*TSCSWY
Trigger: GTACCAGGAACAGCTGGTCCAGGAGCAGGAGCTAGC...ACCTGGCTGCTCCACCTGACGTTCTTTAAAAGGCTGGACTGGCCGCCACTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp GGTGCCACCTCAGCACCTCCAGCCGTCCCGGCCACATCTGCATGTTTTGCTAGCAGCTGGACTAGGGACTaGGCTGCAAAAGTACGATAC +
Preference number: 4 (lower is better)
Translates to: GATSAPPAVPATSACFASSWTRD*AAKVRY
Trigger: GTATCGTACTTTTGCAGCCCAGTCCCTAGTCCAGCT...GCTAGCAAAACATGCAGATGTGGCCGGGACGGCTGGAGGTGCTGAGGTGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp GGCAGCACTCCTAAGCTCCGACTCCGATGCCTGCTCTTTGACTCCACGGCTTTCCGCAACCAGGCTTTCTaGATCTGCACGCATCTAGGC +
Preference number: 4 (lower is better)
Translates to: GSTPKLRLRCLLFDSTAFRNQAF*ICTHLG
Trigger: GCCTAGATGCGTGCAGATCCAGAAAGCCTGGTTGCG...GAAAGCCGTGGAGTCAAAGAGCAGGCATCGGAGTCGGAGCTTAGGAGTGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp GCTTTCTTGACAGAATTCAGGATTGCAATGGTGCTCAGGGACATGGGCCTGGCTGGGTGGCTGAGACGCTaGGGCCTCACTGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: AFLTEFRIAMVLRDMGLAGWLRR*GLTAAL
Trigger: CAAGGCAGCAGTGAGGCCCCAGCGTCTCAGCCACCC...AGCCAGGCCCATGTCCCTGAGCACCATTGCAATCCTGAATTCTGTCAAGAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp GTGTGCTCAAGAGCAGTGCTGCGCCTCTCCGCCACCGAGCCCACCTGTGTTGCGTTCTCTCTCTCTGACTaGGGGAACTTGTTGTACTTC +
Preference number: 4 (lower is better)
Translates to: VCSRAVLRLSATEPTCVAFSLSD*GNLLYF
Trigger: GAAGTACAACAAGTTCCCCCAGTCAGAGAGAGAGAA...CGCAACACAGGTGGGCTCGGTGGCGGAGAGGCGCAGCACTGCTCTTGAGCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp CCACCTGTGTTGCGGTTCCCACTTGGGATGGCAGTGGGCAGATCTCAGTGGCATACATGGGCCTGGCTTTaGGCAGCAACCTCTGCAATG +
Preference number: 4 (lower is better)
Translates to: PPVLRFPLGMAVGRSQWHTWAWL*AATSAM
Trigger: CATTGCAGAGGTTGCTGCCCAAAGCCAGGCCCATGT...ATGCCACTGAGATCTGCCCACTGCCATCCCAAGTGGGAACCGCAACACAGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp CTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCTCCTGCTGCAGGCTaGAGTGTCTTTATTCCTGGC +
Preference number: 4 (lower is better)
Translates to: LSEGPPAAGWSVFIPGGRPPAAG*SVFIPG
Trigger: GCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGG...TCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp CGACTCCGATGCCTGCTCTTTGACTCCACGGCTTTCTTGACAGAATTCAGGATTGGGCTCCTGCCTGCCTaGACACTGGTGGGAGGCGCT +
Preference number: 4 (lower is better)
Translates to: RLRCLLFDSTAFLTEFRIGLLPA*TLVGGA
Trigger: AGCGCCTCCCACCAGTGTCCAGGCAGGCAGGAGCCC...AATCCTGAATTCTGTCAAGAAAGCCGTGGAGTCAAAGAGCAGGCATCGGAGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp TGGCGGCCAGTCCAGCCTTTTAAAGAACGTCAGGTGGAGCAGCCAGGTGAAAGGGTTGCGGTTCCCACTTaGGATGGCAGTGGGCAGATC +
Preference number: 4 (lower is better)
Translates to: WRPVQPFKERQVEQPGERVAVPT*DGSGQI
Trigger: GATCTGCCCACTGCCATCCCAAGTGGGAACCGCAAC...CCTTTCACCTGGCTGCTCCACCTGACGTTCTTTAAAAGGCTGGACTGGCCGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp TCGTGTTCCACAGCAAAGCGCTGCCCAAGGACTGCGGGAAGTGATCCAGCTGCCCTGGTGTCTGCTGCATaGCATCCTGGATGCTTAGCA +
Preference number: 4 (lower is better)
Translates to: SCSTAKRCPRTAGSDPAALVSAA*HPGCLA
Trigger: TGCTAAGCATCCAGGATGCCATGCAGCAGACACCAG...GGCAGCTGGATCACTTCCCGCAGTCCTTGGGCAGCGCTTTGCTGTGGAACACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp CGAGGCCGATACGAGGCTGTGATTCTGCCTTTGGATGGATGTTGCTGTACACAGTTGCCGCAGGCCGCCTaGCAGAGGCAGGAAATGCTC +
Preference number: 4 (lower is better)
Translates to: RGRYEAVILPLDGCCCTQLPQAA*QRQEML
Trigger: GAGCATTTCCTGCCTCTGCCAGGCGGCCTGCGGCAA...CTGTGTACAGCAACATCCATCCAAAGGCAGAATCACAGCCTCGTATCGGCCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CAA 72 bp TCACTGATGCTCTTCTCGGGGGTGCTGATGGCCCGCTaGGTCACGTGCTCAATCTCGCCATTCGACTCTTGC +
Preference number: 4 (lower is better)
Translates to: SLMLFSGVLMAR*VTCSISPFDSC
Trigger: GCAAGAGTCGAATGGCGAGATTGAGCACGTGACCAAGCGGGCCATCAGCACCCCCGAGAAGAGCATCAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp CGAGGCCGATACGAGGCTGTGATTCTGCCTTTGGATGGATGTTGCTGTACACAGGTGGCTGTGTCCCAGTaGGCTTTACTCACGTGGCCC +
Preference number: 4 (lower is better)
Translates to: RGRYEAVILPLDGCCCTQVAVSQ*ALLTWP
Trigger: GGGCCACGTGAGTAAAGCTCACTGGGACACAGCCAC...CTGTGTACAGCAACATCCATCCAAAGGCAGAATCACAGCCTCGTATCGGCCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp CTTGGGCCCTGGCAGTGGCTGTGTCCCAGTGAGCTTTACTCACGTGGCCCTTGCATGGCATTTCGAATTTaGGAAAGGTCCCGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: LGPWQWLCPSELYSRGPCMAFRI*ERSRAE
Trigger: TTCTGCCCGGGACCTTTCTCAAATTCGAAATGCCAT...GCAAGGGCCACGTGAGTAAAGCTCACTGGGACACAGCCACTGCCAGGGCCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp AGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTCTCCCGGGGTTAGCCTaGGAGCTCTTAGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: RRCLVGCFQRGLSEGPPALPGLA*ELLGCS
Trigger: AGAACAGCCTAAGAGCTCTCAGGCTAACCCCGGGAG...AGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp AAACGTGACATCACTGATGCTCTTCTCGGGGGTGCTGATGGCCCGCTTGGTCACCACTGCTGTCTATGTTaGTCTCCCCTGAGGGTTCGG +
Preference number: 4 (lower is better)
Translates to: KRDITDALLGGADGPLGHHCCLC*SPLRVR
Trigger: CCGAACCCTCAGGGGAGATCAACATAGACAGCAGTG...GTGACCAAGCGGGCCATCAGCACCCCCGAGAAGAGCATCAGTGATGTCACGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp GCTCAGGGACATGGGCCTGGCTTTGGGCAGCAACCTCTGCAATGGCCCTGTTTCTGGTCTTCTCATCCCTaGTCCTCCTTCTCAGCATTG +
Preference number: 4 (lower is better)
Translates to: AQGHGPGFGQQPLQWPCFWSSHP*SSFSAL
Trigger: CAATGCTGAGAAGGAGGATCAGGGATGAGAAGACCA...GAAACAGGGCCATTGCAGAGGTTGCTGCCCAAAGCCAGGCCCATGTCCCTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp GATGACGTTGTTGCGGACAGCCACGTCCTCACACACCTCGAGCTCTCGCACCAGCGTCAACAGCTGAACTaGTCACCTCTAGAGACCACT +
Preference number: 4 (lower is better)
Translates to: DDVVADSHVLTHLELSHQRQQLN*SPLETT
Trigger: AGTGGTCTCTAGAGGTGATCAGTTCAGCTGTTGACG...CTGGTGCGAGAGCTCGAGGTGTGTGAGGACGTGGCTGTCCGCAACAACGTCATC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR TCA 90 bp GACAGCCACGTCCTCACACACCTCGAGCTCTCGCACCAGGGCTGGGATGCTCTTTGCGCGCTGTACACATaGTTCTTTTTCCAACCAGTG +
Preference number: 4 (lower is better)
Translates to: DSHVLTHLELSHQGWDALCALYT*FFFQPV
Trigger: CACTGGTTGGAAAAAGAATCATGTGTACAGCGCGCA...AAGAGCATCCCAGCCCTGGTGCGAGAGCTCGAGGTGTGTGAGGACGTGGCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR TCA 90 bp AAACGTGACATCACTGATGCTCTTCTCGGGGGTGCTGATGGCCCGCTTGGTCACGAAGCCAGGACGGACTaGATCAGAAGGAAGATGCGC +
Preference number: 4 (lower is better)
Translates to: KRDITDALLGGADGPLGHEARTD*IRRKMR
Trigger: GCGCATCTTCCTTCTGATTCAGTCCGTCCTGGCTTC...GTGACCAAGCGGGCCATCAGCACCCCCGAGAAGAGCATCAGTGATGTCACGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp GAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATGCCATCAGCAAAGCACTCCGACTCCGATGCCTaGTCTTTGACTCCACGGCTT +
Preference number: 4 (lower is better)
Translates to: ESNSLASRSRGRMPSAKHSDSDA*SLTPRL
Trigger: AAGCCGTGGAGTCAAAGAGCAGGCATCGGAGTCGGA...GTGCTTTGCTGATGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp TCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATTCCACTAAGCTCCGACTCCGATaGCTGCTCTTTGACTCCACG +
Preference number: 4 (lower is better)
Translates to: SCCRLECLYSWRETAHSTKLRLR*LLFDST
Trigger: CGTGGAGTCAAAGAGCAGGCATCGGAGTCGGAGCTT...AGTGGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp AGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTGCCCGCTTGGTCACGTaGTCAATCTCGCCATTCGAC +
Preference number: 4 (lower is better)
Translates to: RRCLVGCFQRGLSEGPPAARLVT*SISPFD
Trigger: GTCGAATGGCGAGATTGAGCACGTGACCAAGCGGGC...AGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp CTTGGGCCCTGGCAGTGGCTGTGTCCCAGTGAGCTTTACTCACGTGGCCCTTGCATGTACATACACAGATaGCAGTCAGCTCCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: LGPWQWLCPSELYSRGPCMYIHR*QSAPGV
Trigger: AACCCCAGGAGCTGACTGGCATCTGTGTATGTACAT...GCAAGGGCCACGTGAGTAAAGCTCACTGGGACACAGCCACTGCCAGGGCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp AAGTCGTTCTGCAAAAGTGTGGGGGATGGGCTGGCACAGTTAACATCAGAAAGCCAGTTCTGTAGGGACTaGGCGGCACGCGTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: KSFCKSVGDGLAQLTSESQFCRD*AARVGP
Trigger: TGGGCCCACGCGTGCCGCGCAGTCCCTACAGAACTG...GCTTTCTGATGTTAACTGTGCCAGCCCATCCCCCACACTTTTGCAGAACGACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526422.2
CDS-3UTR GCA 90 bp AAACGTGACATCACTGATGCTCTTCTCGGGGGTGCTGATGGCCCGCTTGGTCACAGGCGACATTTCGCGTaGGTGTCAAAGGGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: KRDITDALLGGADGPLGHRRHFA*VSKGCL
Trigger: AAGGCAGCCCTTTGACACGCACGCGAAATGTCGCCT...GTGACCAAGCGGGCCATCAGCACCCCCGAGAAGAGCATCAGTGATGTCACGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534532.6
CDS-3UTR GCA 90 bp AAAGTCGTTCTGCAAAAGTGTGGGGGATGGGCTGGCACAGTTAACATCAGAAAGAGCGGACACCAGGGCTaGAGGCCGCTACCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: KVVLQKCGGWAGTVNIRKSGHQG*RPLPRP
Trigger: GGGCCTTGGTAGCGGCCTGCAGCCCTGGTGTCCGCT...CTTTCTGATGTTAACTGTGCCAGCCCATCCCCCACACTTTTGCAGAACGACTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526422.2
CDS-3UTR GCA 90 bp CTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGATGTTTTGCTAGCTCCTaGTCCTGGACCAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LSEGPPAAGWSVFIPGGRCFASS*SWTSCS
Trigger: GGAACAGCTGGTCCAGGAGCAGGAGCTAGCAAAACA...TCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp CCACCTGTGTTGCGGTTCCCACTTGGGATGGCAGTGGGCAGATCTCAGTGGCATTGTTTTGCTAGCTCCTaGTCCTGGACCAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: PPVLRFPLGMAVGRSQWHCFASS*SWTSCS
Trigger: GGAACAGCTGGTCCAGGAGCAGGAGCTAGCAAAACA...ATGCCACTGAGATCTGCCCACTGCCATCCCAAGTGGGAACCGCAACACAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp GGTGCCACCTCAGCACCTCCAGCCGTCCCGGCCACATCTGCATGTTTTGCTAGCTTGGCACAGATGTGCTaGAGTAAGATACGGACGACT +
Preference number: 4 (lower is better)
Translates to: GATSAPPAVPATSACFASLAQMC*SKIRTT
Trigger: AGTCGTCCGTATCTTACTGCAGCACATCTGTGCCAA...GCTAGCAAAACATGCAGATGTGGCCGGGACGGCTGGAGGTGCTGAGGTGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp GATGGCCCGCTTGGTCACGTGCTCAATCTCGCCATTCGACTCTTGCTCCAAACTAGAGACTGGAGGGCCTaGTTCCGGACAGACACTGCA +
Preference number: 4 (lower is better)
Translates to: DGPLGHVLNLAIRLLLQTRDWRA*FRTDTA
Trigger: TGCAGTGTCTGTCCGGAAGCAGGCCCTCCAGTCTCT...AGTTTGGAGCAAGAGTCGAATGGCGAGATTGAGCACGTGACCAAGCGGGCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp GATGGCCCGCTTGGTCACGTGCTCAATCTCGCCATTCGACTCTTGCTCCAAACTCCAGTGCTGCTCCTCTaGTGGTGTCTCTGCAGATGC +
Preference number: 4 (lower is better)
Translates to: DGPLGHVLNLAIRLLLQTPVLLL*WCLCRC
Trigger: GCATCTGCAGAGACACCAGCAGAGGAGCAGCACTGG...AGTTTGGAGCAAGAGTCGAATGGCGAGATTGAGCACGTGACCAAGCGGGCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR GCA 90 bp ATGGAGTGGCGGCCAGTCCAGCCTTTTAAAGAACGTCAGGTGGAGCAGCCAGGTCTGGGGCCTCACTGCTaGCTTGAGATGATGGTGAGT +
Preference number: 4 (lower is better)
Translates to: MEWRPVQPFKERQVEQPGLGPHC*LEMMVS
Trigger: ACTCACCATCATCTCAAGGCAGCAGTGAGGCCCCAG...ACCTGGCTGCTCCACCTGACGTTCTTTAAAAGGCTGGACTGGCCGCCACTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp GATGGCCCGCTTGGTCACGTGCTCAATCTCGCCATTCGACTCTTGCTCCAAACTACGCTGGGGCCTCACTaGTGCCTTGAGATGATGGTG +
Preference number: 4 (lower is better)
Translates to: DGPLGHVLNLAIRLLLQTTLGPH*CLEMMV
Trigger: CACCATCATCTCAAGGCAGCAGTGAGGCCCCAGCGT...AGTTTGGAGCAAGAGTCGAATGGCGAGATTGAGCACGTGACCAAGCGGGCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp AACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCCTTAACAGAGGGTACATGGCCAGCACTTaGCCTGGGTGTGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: NRRDSSCSPIMGAALNRGYMAST*PGCAGL
Trigger: CAGCCCTGCACACCCAGGGCAAGTGCTGGCCATGTA...CCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp TCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGTTGGGCAGCAACCTCTaGAATGGCCCTGTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: SFGGTSCCRLECLYSWRELGSNL*NGPVSG
Trigger: ACCTGAAACAGGGCCATTGCAGAGGTTGCTGCCCAA...CTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp ACTGGTGTCTTCCATGTAGCGTCCCAGCTTTGGGCTCCTGTAACAGACCTCTTTTCAAGGGCTCCTGCCTaGCTGGACACTGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: TGVFHVASQLWAPVTDLFSRAPA*LDTGGR
Trigger: CCTCCCACCAGTGTCCAGGCAGGCAGGAGCCCTTGA...AAAGAGGTCTGTTACAGGAGCCCAAAGCTGGGACGCTACATGGAAGACACCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp TGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTCCACAGCAAAGCGCTaGCCAAGGACTGCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: CLVGCFQRGLSEGPPAAGSTAKR*PRTAGS
Trigger: ACTTCCCGCAGTCCTTGGGCAGCGCTTTGCTGTGGA...GCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534532.6
CDS-3UTR GCA 90 bp GCTGTTCCCCCATCATGGGAGCAGCCCTTAACAGAGGGCTGCACAAATCGGCAGACAAATCGGCAGTGCTaGTCTGGGGAAGGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: AVPPSWEQPLTEGCTNRQTNRQC*SGEGCK
Trigger: TTTGCAGCCTTCCCCAGAGCAGCACTGCCGATTTGT...CTGCCGATTTGTGCAGCCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp TGGCGGCCAGTCCAGCCTTTTAAAGAACGTCAGGTGGAGCAGCCAGGTGAAAGGGAGCACTCCACTGTGTaGCTGGAGAATGGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: WRPVQPFKERQVEQPGEREHSTV*LENGSH
Trigger: GTGAGAGCCATTCTCCAGGCACACAGTGGAGTGCTC...CCTTTCACCTGGCTGCTCCACCTGACGTTCTTTAAAAGGCTGGACTGGCCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp ATGGAGTGGCGGCCAGTCCAGCCTTTTAAAGAACGTCAGGTGGAGCAGCCAGGTGCACTGCAGGGACACTaGTGTCTTCCATGTAGCGTC +
Preference number: 4 (lower is better)
Translates to: MEWRPVQPFKERQVEQPGALQGH*CLPCSV
Trigger: GACGCTACATGGAAGACACCAGTGTCCCTGCAGTGC...ACCTGGCTGCTCCACCTGACGTTCTTTAAAAGGCTGGACTGGCCGCCACTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp TCAAACGTGTCTGAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATGCCAGGGCGGGCCGAAAAGTaGAAGCCAAACAAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SNVSESNSLASRSRGRMPGRAEK*KPNKAP
Trigger: AGGAGCCTTGTTTGGCTTCCACTTTTCGGCCCGCCC...TGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTCAGACACGTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp GTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATACAGAATTTCCCACTaGCCAACCACCGCGCCGAGC +
Preference number: 4 (lower is better)
Translates to: VFRGVFRRDLLLQAGVSLYRISH*PTTAPS
Trigger: GCTCGGCGCGGTGGTTGGCCAGTGGGAAATTCTGTA...TAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp TGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTACAGAATTTCCCACTaGCCAACCACCGCGCCGAGC +
Preference number: 4 (lower is better)
Translates to: CLVGCFQRGLSEGPPAAGYRISH*PTTAPS
Trigger: GCTCGGCGCGGTGGTTGGCCAGTGGGAAATTCTGTA...GCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp GAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGAGGGCGCTGATAAACTaGACCGCCTGGTTTCTACAG +
Preference number: 4 (lower is better)
Translates to: EGSFGGTSCCRLECLYSWRALIN*TAWFLQ
Trigger: CTGTAGAAACCAGGCGGTCCAGTTTATCAGCGCCCT...CCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp GCTGTTCCCCCATCATGGGAGCAGCCCTTAACAGAGGGCTGCACAAATCGGCAGAGTTCAGTAAGAGACTaGAGGGCCTGCTTCCGGACA +
Preference number: 4 (lower is better)
Translates to: AVPPSWEQPLTEGCTNRQSSVRD*RACFRT
Trigger: TGTCCGGAAGCAGGCCCTCCAGTCTCTTACTGAACT...CTGCCGATTTGTGCAGCCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp CCACCTGTGTTGCGGTTCCCACTTGGGATGGCAGTGGGCAGATCTCAGTGGCATTATCGGCTCAGTTCCTaGCTTTCGGTGGTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PPVLRFPLGMAVGRSQWHYRLSS*LSVVRR
Trigger: TCTCCTCACCACCGAAAGCCAGGAACTGAGCCGATA...ATGCCACTGAGATCTGCCCACTGCCATCCCAAGTGGGAACCGCAACACAGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp TGGTGGGAGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCAGGAGCCAGCAATCTTaGAGAGCAGCATCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: WWEALFSWLFSEGSFGGTRSQQS*RAASRQ
Trigger: CTGCCTGGATGCTGCTCTCCAAGATTGCTGGCTCCT...GGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCTCCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp AAACGTGACATCACTGATGCTCTTCTCGGGGGTGCTGATGGCCCGCTTGGTCACCTTCTCCACCCTGGCTaGACACAGCTGGGCTATATC +
Preference number: 4 (lower is better)
Translates to: KRDITDALLGGADGPLGHLLHPG*TQLGYI
Trigger: GATATAGCCCAGCTGTGTCCAGCCAGGGTGGAGAAG...GTGACCAAGCGGGCCATCAGCACCCCCGAGAAGAGCATCAGTGATGTCACGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp GGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATCTGCTTCCGGATGAATaGGTCGGAATCCTTCAGACA +
Preference number: 4 (lower is better)
Translates to: GTSCCRLECLYSWRETAHLLPDE*VGILQT
Trigger: TGTCTGAAGGATTCCGACCCATTCATCCGGAAGCAG...ATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp GGTGCCACCTCAGCACCTCCAGCCGTCCCGGCCACATCTGCATGTTTTGCTAGCAAAACTCCCCGAAGCTaGCAATGTCTGGGTGTGAAT +
Preference number: 4 (lower is better)
Translates to: GATSAPPAVPATSACFASKTPRS*QCLGVN
Trigger: ATTCACACCCAGACATTGCCAGCTTCGGGGAGTTTT...GCTAGCAAAACATGCAGATGTGGCCGGGACGGCTGGAGGTGCTGAGGTGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp CTGGGATGCTCTTCTTTGCCAGATCCTCGTGCTGTAAGCACAGCTTACCTAAGGCTGGGTGTGCAGGGCTaGCTCACGGCAGGTGACATG +
Preference number: 4 (lower is better)
Translates to: LGCSSLPDPRAVSTAYLRLGVQG*LTAGDM
Trigger: CATGTCACCTGCCGTGAGCCAGCCCTGCACACCCAG...CCTTAGGTAAGCTGTGCTTACAGCACGAGGATCTGGCAAAGAAGAGCATCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR CCA 90 bp GGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGAATTCAGGATTGCAATaGTGCTCAGGGACATGGGCC +
Preference number: 4 (lower is better)
Translates to: GVFRRDLLLQAGVSLFLANSGLQ*CSGTWA
Trigger: GGCCCATGTCCCTGAGCACCATTGCAATCCTGAATT...CGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp CCACCTGTGTTGCGGTTCCCACTTGGGATGGCAGTGGGCAGATCTCAGTGGCATGAGTGTCTTTATTCCTaGCGGGAGACCGCACATTCC +
Preference number: 4 (lower is better)
Translates to: PPVLRFPLGMAVGRSQWHECLYS*RETAHS
Trigger: GGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTC...ATGCCACTGAGATCTGCCCACTGCCATCCCAAGTGGGAACCGCAACACAGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp AGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTTGCCTGCCTGGACACTaGTGGGAGGCGCTGTTTAGT +
Preference number: 4 (lower is better)
Translates to: RRCLVGCFQRGLSEGPPACLPGH*WEALFS
Trigger: ACTAAACAGCGCCTCCCACCAGTGTCCAGGCAGGCA...AGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp CGAGGCCGATACGAGGCTGTGATTCTGCCTTTGGATGGATGTTGCTGTACACAGCACACCGCCTCTGCCTaGGCACAGATGAACTGCCCT +
Preference number: 4 (lower is better)
Translates to: RGRYEAVILPLDGCCCTQHTASA*AQMNCP
Trigger: AGGGCAGTTCATCTGTGCCCAGGCAGAGGCGGTGTG...CTGTGTACAGCAACATCCATCCAAAGGCAGAATCACAGCCTCGTATCGGCCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp CCCACTAGTGCTAACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCTCGGCAGTGCTGCTCTaGGGAAGGCTGCAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: PTSANRRDSSCSPIMGAASAVLL*GRLQSH
Trigger: ATGGCTTTGCAGCCTTCCCCAGAGCAGCACTGCCGA...GGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTTAGCACTAGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp CACTGTTCCTCTTTGCCACAGAGAAAGCACCCAGACGCCACAGGCTCTGTCGCAGGTTCCCACTTGGGATaGCAGTGGGCAGATCTCAGT +
Preference number: 4 (lower is better)
Translates to: HCSSLPQRKHPDATGSVAGSHLG*QWADLS
Trigger: ACTGAGATCTGCCCACTGCCATCCCAAGTGGGAACC...TGCGACAGAGCCTGTGGCGTCTGGGTGCTTTCTCTGTGGCAAAGAGGAACAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp TCGTGTTCCACAGCAAAGCGCTGCCCAAGGACTGCGGGAAGTGATCCAGCTGCCTTAAAGAACGTCAGGTaGAGCAGCCAGGTGAAAGGC +
Preference number: 4 (lower is better)
Translates to: SCSTAKRCPRTAGSDPAALKNVR*SSQVKG
Trigger: GCCTTTCACCTGGCTGCTCCACCTGACGTTCTTTAA...GGCAGCTGGATCACTTCCCGCAGTCCTTGGGCAGCGCTTTGCTGTGGAACACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp GCTGTTCCCCCATCATGGGAGCAGCCCTTAACAGAGGGCTGCACAAATCGGCAGCAAACCATGATGGAGTaGCGGCCAGTCCAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: AVPPSWEQPLTEGCTNRQQTMME*RPVQPF
Trigger: AAAAGGCTGGACTGGCCGCCACTCCATCATGGTTTG...CTGCCGATTTGTGCAGCCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp CCTCCAGCCGTCCCGGCCACATCTGCATGTTTTGCTAGCTCCTGCTCCTGGACCACTCCACGGCTTTCTTaGCAGAATTCAGGATTGCAA +
Preference number: 4 (lower is better)
Translates to: PPAVPATSACFASSCSWTTPRLS*QNSGLQ
Trigger: TTGCAATCCTGAATTCTGTCAAGAAAGCCGTGGAGT...GGTCCAGGAGCAGGAGCTAGCAAAACATGCAGATGTGGCCGGGACGGCTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp AGGGATGGCTCCCCACCCTCAGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGACTCCACGGCTTTCTTaGCAGAATTCAGGATTGCAA +
Preference number: 4 (lower is better)
Translates to: RDGSPPSALGIHAPASFLTPRLS*QNSGLQ
Trigger: TTGCAATCCTGAATTCTGTCAAGAAAGCCGTGGAGT...CAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCTGAGGGTGGGGAGCCATCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp CTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGATCTGAGCTTCCTGCATaGCTACATTTGCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: LSEGPPAAGWSVFIPGGRSELPA*LHLPRP
Trigger: TGGCCTTGGCAAATGTAGTCATGCAGGAAGCTCAGA...TCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp GGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATGAGATGAGCTTCTTCTaGGCTTCCTGCATGACTACA +
Preference number: 4 (lower is better)
Translates to: GTSCCRLECLYSWRETAHEMSFF*ASCMTT
Trigger: TGTAGTCATGCAGGAAGCTCAGAAGAAGCTCATCTC...ATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp GGCAGCACTCCTAAGCTCCGACTCCGATGCCTGCTCTTTGACTCCACGGCTTTCCACAAGGAAGTTTACTaGGCAGCTGGACTAGGGACT +
Preference number: 4 (lower is better)
Translates to: GSTPKLRLRCLLFDSTAFHKEVY*AAGLGT
Trigger: AGTCCCTAGTCCAGCTGCTCAGTAAACTTCCTTGTG...GAAAGCCGTGGAGTCAAAGAGCAGGCATCGGAGTCGGAGCTTAGGAGTGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp CTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGATTCAGGTGTAGGAGATaGTACTGCTACATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LSEGPPAAGWSVFIPGGRFRCRR*YCYMAS
Trigger: GCTGGCCATGTAGCAGTATCATCTCCTACACCTGAA...TCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp AGGTCCAGGGGTAGGATGCCATCAGCAAAGCACGCCAAAATACTAAGGCAGATTTCTTCTCGGGGGTGCTaGTGGCCCGCTTGGTCACGT +
Preference number: 4 (lower is better)
Translates to: RSRGRMPSAKHAKILRQISSRGC*WPAWSR
Trigger: ACGTGACCAAGCGGGCCATCAGCACCCCCGAGAAGA...AATCTGCCTTAGTATTTTGGCGTGCTTTGCTGATGGCATCCTACCCCTGGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp AGGGATGGCTCCCCACCCTCAGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGTCGCCATTCGACTCTTaGTCCAAACTGTATGAAGAC +
Preference number: 4 (lower is better)
Translates to: RDGSPPSALGIHAPASFLSPFDS*SKLYED
Trigger: GTCTTCATACAGTTTGGAGCAAGAGTCGAATGGCGA...CAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCTGAGGGTGGGGAGCCATCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp CCCTCAGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGGTTGTCATAGTGATAGCCCGCTTGGTCACGTaGTCAATCTCGCCATTCGAC +
Preference number: 4 (lower is better)
Translates to: PSALGIHAPASFLVVIVIARLVT*SISPFD
Trigger: GTCGAATGGCGAGATTGAGCACGTGACCAAGCGGGC...TATCACTATGACAACCAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCTGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp GATGACGTTGTTGCGGACAGCCACGTCCTCACACACCTCGAGCTCTCGCACCAGGATGTAACTGACCCCTaGTCCAAACGTGACATCACT +
Preference number: 4 (lower is better)
Translates to: DDVVADSHVLTHLELSHQDVTDP*SKRDIT
Trigger: AGTGATGTCACGTTTGGAGCAGGGGTCAGTTACATC...CTGGTGCGAGAGCTCGAGGTGTGTGAGGACGTGGCTGTCCGCAACAACGTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR GCA 90 bp GCTCAGGGACATGGGCCTGGCTTTGGGCAGCAACCTCTGCAATGGCCCTGTTTCGATGTAACTGACCCCTaGTCCAAACGTGACATCACT +
Preference number: 4 (lower is better)
Translates to: AQGHGPGFGQQPLQWPCFDVTDP*SKRDIT
Trigger: AGTGATGTCACGTTTGGAGCAGGGGTCAGTTACATC...GAAACAGGGCCATTGCAGAGGTTGCTGCCCAAAGCCAGGCCCATGTCCCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp AAAGTCGTTCTGCAAAAGTGTGGGGGATGGGCTGGCACAGTTAACATCAGAAAGCAGCGAGGTAGCAGCTaGCATGCCGACCGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: KVVLQKCGGWAGTVNIRKQRGSS*HADRWS
Trigger: GCTCCAGCGGTCGGCATGGCAGCTGCTACCTCGCTG...CTTTCTGATGTTAACTGTGCCAGCCCATCCCCCACACTTTTGCAGAACGACTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526422.2
CDS-3UTR GCA 90 bp GCGCCTCTCCGCCACCGAGCCCACCTGTGTTGCGGTTCCCACTTGGGATGGCAGATAGAGTTTTGTGAATaGAGCCAATCCAGTCTCTAT +
Preference number: 4 (lower is better)
Translates to: APLRHRAHLCCGSHLGWQIEFCE*SQSSLY
Trigger: ATAGAGACTGGATTGGCTGCATTCACAAAACTCTAT...CTGCCATCCCAAGTGGGAACCGCAACACAGGTGGGCTCGGTGGCGGAGAGGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp AATTCAGGATTGCAATGGTGCTCAGGGACATGGGCCTGGCTTTGGGCAGCAACCGCCAAACAAGGCTCCTaGGGGTGTTCCGCTAATTCG +
Preference number: 4 (lower is better)
Translates to: NSGLQWCSGTWAWLWAATAKQGS*GCSANS
Trigger: CGAATTAGCGGAACACCCGCAGGAGCCTTGTTTGGC...GGTTGCTGCCCAAAGCCAGGCCCATGTCCCTGAGCACCATTGCAATCCTGAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp AAGGGCTCCTGCCTGCCTGGACACTGGTGGGAGGCGCTGTTTAGTTGGCTGTTTACCTTGGCACAGATGTaGTGCAGTAAGATACGGACG +
Preference number: 4 (lower is better)
Translates to: KGSCLPGHWWEALFSWLFTLAQM*CSKIRT
Trigger: CGTCCGTATCTTACTGCAGCACATCTGTGCCAAGGT...AAACAGCCAACTAAACAGCGCCTCCCACCAGTGTCCAGGCAGGCAGGAGCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp GGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGCCTCCTTCTCAGCATTaGCATGACACATCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: GVFRRDLLLQAGVSLFLAPPSQH*HDTSFS
Trigger: GGAGAAAGATGTGTCATGGCAATGCTGAGAAGGAGG...CGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp CTTGGGCCCTGGCAGTGGCTGTGTCCCAGTGAGCTTTACTCACGTGGCCCTTGCGTGCCGAATGTTCCGTaGCAGTGTGAGATATTACAT +
Preference number: 4 (lower is better)
Translates to: LGPWQWLCPSELYSRGPCVPNVP*QCEILH
Trigger: ATGTAATATCTCACACTGGCACGGAACATTCGGCAC...GCAAGGGCCACGTGAGTAAAGCTCACTGGGACACAGCCACTGCCAGGGCCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp TCAAACGTGTCTGAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATGCCAATGTTGGAGAGGCGGTaGTCGCAGGTGGAGAGTACA +
Preference number: 4 (lower is better)
Translates to: SNVSESNSLASRSRGRMPMLERR*SQVEST
Trigger: TGTACTCTCCACCTGCGAGCACCGCCTCTCCAACAT...TGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTCAGACACGTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp TGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATTCCACTGCTGAGGAATCAGAAGGAAGATaGGCTTCTCCACCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: CRLECLYSWRETAHSTAEESEGR*ASPPWL
Trigger: CAGCCAGGGTGGAGAAGCGCATCTTCCTTCTGATTC...CTCAGCAGTGGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp CAGCCGTCCCGGCCACATCTGCATGTTTTGCTAGCTCCTGCTCCTGGACCAGCTTTTGCCAGATCCTCGTaGTGTAAGCACAGCTTACCT +
Preference number: 4 (lower is better)
Translates to: QPSRPHLHVLLAPAPGPAFARSS*CKHSLP
Trigger: AGGTAAGCTGTGCTTACAGCACGAGGATCTGGCAAA...AGCTGGTCCAGGAGCAGGAGCTAGCAAAACATGCAGATGTGGCCGGGACGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp TCAAACGTGTCTGAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATGCCAGCACCAGGGCTGGGATaGTCTTCTTTGCCAGATCCT +
Preference number: 4 (lower is better)
Translates to: SNVSESNSLASRSRGRMPAPGLG*SSLPDP
Trigger: AGGATCTGGCAAAGAAGAGCATCCCAGCCCTGGTGC...TGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTCAGACACGTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp CTCCCTGAGATAGTGCATGAGTTCCCGCAAAGCTGGGATCTTATTTTTCTCCAGCACTTGCCCTGGGTGTaGAGGGCTGGCTCACGGCAG +
Preference number: 4 (lower is better)
Translates to: LPEIVHEFPQSWDLIFLQHLPWV*RAGSRQ
Trigger: CTGCCGTGAGCCAGCCCTGCACACCCAGGGCAAGTG...CTGGAGAAAAATAAGATCCCAGCTTTGCGGGAACTCATGCACTATCTCAGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp GACAGCCACGTCCTCACACACCTCGAGCTCTCGCACCAGGGCTGGGATGCTCTTGACAGAATTCAGGATTaGAATGGTGCTCAGGGACAT +
Preference number: 4 (lower is better)
Translates to: DSHVLTHLELSHQGWDALDRIQD*NGAQGH
Trigger: ATGTCCCTGAGCACCATTGCAATCCTGAATTCTGTC...AAGAGCATCCCAGCCCTGGTGCGAGAGCTCGAGGTGTGTGAGGACGTGGCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR GCA 90 bp CTTGGGCCCTGGCAGTGGCTGTGTCCCAGTGAGCTTTACTCACGTGGCCCTTGCGACAGAATTCAGGATTaGAATGGTGCTCAGGGACAT +
Preference number: 4 (lower is better)
Translates to: LGPWQWLCPSELYSRGPCDRIQD*NGAQGH
Trigger: ATGTCCCTGAGCACCATTGCAATCCTGAATTCTGTC...GCAAGGGCCACGTGAGTAAAGCTCACTGGGACACAGCCACTGCCAGGGCCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp GCTTTCTTGACAGAATTCAGGATTGCAATGGTGCTCAGGGACATGGGCCTGGCTTTCCTCAAGGGCTCCTaGCTGCCTGGACACTGGTGG +
Preference number: 4 (lower is better)
Translates to: AFLTEFRIAMVLRDMGLAFLKGS*LPGHWW
Trigger: CCACCAGTGTCCAGGCAGGCAGGAGCCCTTGAGGAA...AGCCAGGCCCATGTCCCTGAGCACCATTGCAATCCTGAATTCTGTCAAGAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp GCTTTCTTGACAGAATTCAGGATTGCAATGGTGCTCAGGGACATGGGCCTGGCTCGGAGGACACGAGACTaGTTCCTCAAGGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: AFLTEFRIAMVLRDMGLARRTRD*FLKGSC
Trigger: GCAGGAGCCCTTGAGGAAGCAGTCTCGTGTCCTCCG...AGCCAGGCCCATGTCCCTGAGCACCATTGCAATCCTGAATTCTGTCAAGAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp ATGGAGTGGCGGCCAGTCCAGCCTTTTAAAGAACGTCAGGTGGAGCAGCCAGGTTTATGTGAAACACTTTaGCGCAGGCCGCCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: MEWRPVQPFKERQVEQPGLCETL*RRPPGR
Trigger: TCTGCCAGGCGGCCTGCGGCAAAGTGTTTCACATAA...ACCTGGCTGCTCCACCTGACGTTCTTTAAAAGGCTGGACTGGCCGCCACTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp GCTGTTCCCCCATCATGGGAGCAGCCCTTAACAGAGGGCTGCACAAATCGGCAGGACTCAGGACTGAAGTaGTGTAAAGCAAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: AVPPSWEQPLTEGCTNRQDSGLK*CKARSC
Trigger: GCAGCTCCTTGCTTTACAGCACTTCAGTCCTGAGTC...CTGCCGATTTGTGCAGCCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp CTGCAATTGCTCGAGGCTATGATGAAGGCAGCAGCATCAGGAATGGAGCGGGGCGCCGAGTCGTTCCTGTaGACCAATCACAACGTACAG +
Preference number: 4 (lower is better)
Translates to: LQLLEAMMKAAASGMERGAESFL*TNHNVQ
Trigger: CTGTACGTTGTGATTGGTCCACAGGAACGACTCGGC...GCCCCGCTCCATTCCTGATGCTGCTGCCTTCATCATAGCCTCGAGCAATTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526422.2
CDS-3UTR CCA 90 bp GGTGCCACCTCAGCACCTCCAGCCGTCCCGGCCACATCTGCATGTTTTGCTAGCCAATATCTTCTCTCCTaGGTGGCTTTCCCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: GATSAPPAVPATSACFASQYLLS*VAFPFF
Trigger: GAAAAAGGGGAAAGCCACCCAGGAGAGAAGATATTG...GCTAGCAAAACATGCAGATGTGGCCGGGACGGCTGGAGGTGCTGAGGTGGCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp ATGGAGTGGCGGCCAGTCCAGCCTTTTAAAGAACGTCAGGTGGAGCAGCCAGGTAGGGCGCTGATAAACTaGACCGCCTGGTTTCTACAG +
Preference number: 4 (lower is better)
Translates to: MEWRPVQPFKERQVEQPGRALIN*TAWFLQ
Trigger: CTGTAGAAACCAGGCGGTCCAGTTTATCAGCGCCCT...ACCTGGCTGCTCCACCTGACGTTCTTTAAAAGGCTGGACTGGCCGCCACTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp GGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATAGTAAAAACCCGGTGTaGGATCTTGGAACTTCGGGA +
Preference number: 4 (lower is better)
Translates to: GTSCCRLECLYSWRETAHSKNPV*DLGTSG
Trigger: TCCCGAAGTTCCAAGATCCCACACCGGGTTTTTACT...ATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp GTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTAGACAGTGTGCAAAGCTaGACAGTGCCTTGCTGCGGA +
Preference number: 4 (lower is better)
Translates to: VFRGVFRRDLLLQAGVSLDSVQS*TVPCCG
Trigger: TCCGCAGCAAGGCACTGTCCAGCTTTGCACACTGTC...TAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp GGTGGGAGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTAGTTCAGTAAGAGACTaGAGGGCCTGCTTCCGGACA +
Preference number: 4 (lower is better)
Translates to: GGRRCLVGCFQRGLSEGPSSVRD*RACFRT
Trigger: TGTCCGGAAGCAGGCCCTCCAGTCTCTTACTGAACT...AGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCTCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp AATTCAGGATTGCAATGGTGCTCAGGGACATGGGCCTGGCTTTGGGCAGCAACCCTTCTCCACCCTGGCTaGACACAGCTGGGCTATATC +
Preference number: 4 (lower is better)
Translates to: NSGLQWCSGTWAWLWAATLLHPG*TQLGYI
Trigger: GATATAGCCCAGCTGTGTCCAGCCAGGGTGGAGAAG...GGTTGCTGCCCAAAGCCAGGCCCATGTCCCTGAGCACCATTGCAATCCTGAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp AGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTTCACGGCAGGTGACATaGCAGGGTTTTCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: RRCLVGCFQRGLSEGPPASRQVT*QGFLGQ
Trigger: CTGGCCAAGAAAACCCTGCCATGTCACCTGCCGTGA...AGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp GAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATGCCATCAGCAAAGCACGATGATACTGCTACATaGCCAGCACTTGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: ESNSLASRSRGRMPSAKHDDTAT*PALALG
Trigger: ACCCAGGGCAAGTGCTGGCCATGTAGCAGTATCATC...GTGCTTTGCTGATGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp ATGGAGTGGCGGCCAGTCCAGCCTTTTAAAGAACGTCAGGTGGAGCAGCCAGGTGATGATACTGCTACATaGCCAGCACTTGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: MEWRPVQPFKERQVEQPGDDTAT*PALALG
Trigger: ACCCAGGGCAAGTGCTGGCCATGTAGCAGTATCATC...ACCTGGCTGCTCCACCTGACGTTCTTTAAAAGGCTGGACTGGCCGCCACTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp CCCTCAGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGGTTGTCATAGTGATATCAGGGACATGGGCCTaGCTTTGGGCAGCAACCTCT +
Preference number: 4 (lower is better)
Translates to: PSALGIHAPASFLVVIVISGTWA*LWAATS
Trigger: AGAGGTTGCTGCCCAAAGCCAGGCCCATGTCCCTGA...TATCACTATGACAACCAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCTGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp TGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATTCCACTGCTGAGGAGTGTCTTTATTCCTaGCGGGAGACCGCACATTCC +
Preference number: 4 (lower is better)
Translates to: CRLECLYSWRETAHSTAEECLYS*RETAHS
Trigger: GGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTC...CTCAGCAGTGGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp CTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGATTGCTCCAAACTGTATaGAGACACCTGACTGCACGT +
Preference number: 4 (lower is better)
Translates to: LSEGPPAAGWSVFIPGGRLLQTV*RHLTAR
Trigger: ACGTGCAGTCAGGTGTCTTCATACAGTTTGGAGCAA...TCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp GCTGTTCCCCCATCATGGGAGCAGCCCTTAACAGAGGGCTGCACAAATCGGCAGTTGCTCCAAACTGTATaGAGACACCTGACTGCACGT +
Preference number: 4 (lower is better)
Translates to: AVPPSWEQPLTEGCTNRQLLQTV*RHLTAR
Trigger: ACGTGCAGTCAGGTGTCTTCATACAGTTTGGAGCAA...CTGCCGATTTGTGCAGCCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp GAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCCAATCCAGTCTCTATaGTCTCTGCTTCTATGCTGG +
Preference number: 4 (lower is better)
Translates to: EGSFGGTSCCRLECLYSWPIQSL*SLLLCW
Trigger: CCAGCATAGAAGCAGAGATCATAGAGACTGGATTGG...CCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp GCTGTTCCCCCATCATGGGAGCAGCCCTTAACAGAGGGCTGCACAAATCGGCAGCCAATCCAGTCTCTATaGTCTCTGCTTCTATGCTGG +
Preference number: 4 (lower is better)
Translates to: AVPPSWEQPLTEGCTNRQPIQSL*SLLLCW
Trigger: CCAGCATAGAAGCAGAGATCATAGAGACTGGATTGG...CTGCCGATTTGTGCAGCCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp TGTTGCGGACAGCCACGTCCTCACACACCTCGAGCTCTCGCACCAGGGCTGGGATTTCATAGAGTTTTGTaGATGCAGCCAATCCAGTCT +
Preference number: 4 (lower is better)
Translates to: CCGQPRPHTPRALAPGLGFHRVL*MQPIQS
Trigger: AGACTGGATTGGCTGCATTCACAAAACTCTATGAAA...TCCCAGCCCTGGTGCGAGAGCTCGAGGTGTGTGAGGACGTGGCTGTCCGCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR TCA 90 bp AAGGGCTCCTGCCTGCCTGGACACTGGTGGGAGGCGCTGTTTAGTTGGCTGTTTATGGCATTTCGAATTTaGGAAAGGTCCCGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: KGSCLPGHWWEALFSWLFMAFRI*ERSRAE
Trigger: TTCTGCCCGGGACCTTTCTCAAATTCGAAATGCCAT...AAACAGCCAACTAAACAGCGCCTCCCACCAGTGTCCAGGCAGGCAGGAGCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp GCTCAGGGACATGGGCCTGGCTTTGGGCAGCAACCTCTGCAATGGCCCTGTTTCTCTGAACTTGTGAGATaGGCTTCTTCTGAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: AQGHGPGFGQQPLQWPCFSELVR*ASSELP
Trigger: AGGAAGCTCAGAAGAAGCTCATCTCACAAGTTCAGA...GAAACAGGGCCATTGCAGAGGTTGCTGCCCAAAGCCAGGCCCATGTCCCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp CGAGGCCGATACGAGGCTGTGATTCTGCCTTTGGATGGATGTTGCTGTACACAGCACTGCTGTCTATGTTaGTCTCCCCTGAGGGTTCGG +
Preference number: 4 (lower is better)
Translates to: RGRYEAVILPLDGCCCTQHCCLC*SPLRVR
Trigger: CCGAACCCTCAGGGGAGATCAACATAGACAGCAGTG...CTGTGTACAGCAACATCCATCCAAAGGCAGAATCACAGCCTCGTATCGGCCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp GGGAGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTTGGTCTTCTCATCCCTaGTCCTCCTTCTCAGCATTG +
Preference number: 4 (lower is better)
Translates to: GRRCLVGCFQRGLSEGPPWSSHP*SSFSAL
Trigger: CAATGCTGAGAAGGAGGATCAGGGATGAGAAGACCA...AGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp CTTCTCGGGGGTGCTGATGGCCCGCTTGGTCACGTGCTCAATCTCGCCATTCGAGTCTTCCTTCATGCCTaGGACATCACAGTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: LLGGADGPLGHVLNLAIRVFLHA*DITVFQ
Trigger: TTGAAACACTGTGATGTCTCAGGCATGAAGGAAGAC...TCGAATGGCGAGATTGAGCACGTGACCAAGCGGGCCATCAGCACCCCCGAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp GCTCAGGGACATGGGCCTGGCTTTGGGCAGCAACCTCTGCAATGGCCCTGTTTCGAATTGGGATTCTGCTaGCTGCTGATTTTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: AQGHGPGFGQQPLQWPCFELGFC*LLIFSQ
Trigger: TTGGGAGAAAATCAGCAGTCAGCAGAATCCCAATTC...GAAACAGGGCCATTGCAGAGGTTGCTGCCCAAAGCCAGGCCCATGTCCCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp TCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATTCCACTTGCGTCAGCAATTCCTaGAGACAGTTCTTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: SCCRLECLYSWRETAHSTCVSNS*RQFLPS
Trigger: GGAAGGCAAGAACTGTCTTCAGGAATTGCTGACGCA...AGTGGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR TCA 90 bp TGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATTCCACTGCTGAGCTGTTCCATTCTCCTTaGGAACGATGTTGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: CRLECLYSWRETAHSTAELFHSP*ERCWRG
Trigger: GCCTCTCCAACATCGTTCTCAAGGAGAATGGAACAG...CTCAGCAGTGGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp TCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGAATCGATCAGAGTGCTaGCAAATCGGAAGAACAGGG +
Preference number: 4 (lower is better)
Translates to: SFGGTSCCRLECLYSWRENRSEC*QIGRTG
Trigger: CCCTGTTCTTCCGATTTGTCAGCACTCTGATCGATT...CTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp GATGGCCCGCTTGGTCACGTGCTCAATCTCGCCATTCGACTCTTGCTCCAAACTGGCAATGTCTGGGTGTaGATCGATCAGAGTGCTGAC +
Preference number: 4 (lower is better)
Translates to: DGPLGHVLNLAIRLLLQTGNVWV*IDQSAD
Trigger: GTCAGCACTCTGATCGATTCACACCCAGACATTGCC...AGTTTGGAGCAAGAGTCGAATGGCGAGATTGAGCACGTGACCAAGCGGGCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp AAGCCAGGACGGACTGAATCAGAAGGAAGATGCGCTTCTCCACCCTGGCTGGACTTCAGGTGTAGGAGATaGTACTGCTACATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: KPGRTESEGRCASPPWLDFRCRR*YCYMAS
Trigger: GCTGGCCATGTAGCAGTATCATCTCCTACACCTGAA...GTCCAGCCAGGGTGGAGAAGCGCATCTTCCTTCTGATTCAGTCCGTCCTGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR TCA 90 bp ATGGAGTGGCGGCCAGTCCAGCCTTTTAAAGAACGTCAGGTGGAGCAGCCAGGTTTCAGGTGTAGGAGATaGTACTGCTACATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: MEWRPVQPFKERQVEQPGFRCRR*YCYMAS
Trigger: GCTGGCCATGTAGCAGTATCATCTCCTACACCTGAA...ACCTGGCTGCTCCACCTGACGTTCTTTAAAAGGCTGGACTGGCCGCCACTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp AACATCACTCAGAAGCCTGTGTTCTTCAAGAGCAGGTGTTCTCAGCCTCACATGTCTTCTCGGGGGTGCTaGTGGCCCGCTTGGTCACGT +
Preference number: 4 (lower is better)
Translates to: NITQKPVFFKSRCSQPHMSSRGC*WPAWSR
Trigger: ACGTGACCAAGCGGGCCATCAGCACCCCCGAGAAGA...CATGTGAGGCTGAGAACACCTGCTCTTGAAGAACACAGGCTTCTGAGTGATGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp TGGTGGGAGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCAATTTTCTCTTTGGCTaGCGACGGAGTCCGTGGTGT +
Preference number: 4 (lower is better)
Translates to: WWEALFSWLFSEGSFGGTNFLFG*RRSPWC
Trigger: ACACCACGGACTCCGTCGTCAGCCAAAGAGAAAATT...GGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCTCCCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp AAACGTGACATCACTGATGCTCTTCTCGGGGGTGCTGATGGCCCGCTTGGTCACGTGAAGTGCTCTCTCTaGCTGGGGGAACTTGTTGTA +
Preference number: 4 (lower is better)
Translates to: KRDITDALLGGADGPLGHVKCSL*LGELVV
Trigger: TACAACAAGTTCCCCCAGTCAGAGAGAGCACTTCAC...GTGACCAAGCGGGCCATCAGCACCCCCGAGAAGAGCATCAGTGATGTCACGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534532.6
CDS-3UTR GCA 90 bp TCGTGTTCCACAGCAAAGCGCTGCCCAAGGACTGCGGGAAGTGATCCAGCTGCCTCGCCATTCGACTCTTaGTCCAAACTGTATGAAGAC +
Preference number: 4 (lower is better)
Translates to: SCSTAKRCPRTAGSDPAASPFDS*SKLYED
Trigger: GTCTTCATACAGTTTGGAGCAAGAGTCGAATGGCGA...GGCAGCTGGATCACTTCCCGCAGTCCTTGGGCAGCGCTTTGCTGTGGAACACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534532.6
ENST00000534548.7
CDS-3UTR GCA 90 bp GTTCCTCTTTGCCACAGAGAAAGCACCCAGACGCCACAGGCTCTGTCGCATTTCTACTCACGTGGCCCTTaGTTCATCCAGCACAGCTCT +
Preference number: 4 (lower is better)
Translates to: VPLCHRESTQTPQALSHFYSRGP*FIQHSS
Trigger: AGAGCTGTGCTGGATGAAGCAAGGGCCACGTGAGTA...GAAATGCGACAGAGCCTGTGGCGTCTGGGTGCTTTCTCTGTGGCAAAGAGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp AATACTCCTGCAATTGCTCGAGGCTATGATGAAGGCAGCAGCATCAGGAATGGAGGCTCGCCGCCGCCGTaGTCAACTTTCAAAGCTCGC +
Preference number: 4 (lower is better)
Translates to: NTPAIARGYDEGSSIRNGGSPPP*STFKAR
Trigger: GCGAGCTTTGAAAGTTGAGCACGGCGGCGGCGAGCC...TCCATTCCTGATGCTGCTGCCTTCATCATAGCCTCGAGCAATTGCAGGAGTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526422.2
CDS-3UTR GCA 90 bp GTGTGCTCAAGAGCAGTGCTGCGCCTCTCCGCCACCGAGCCCACCTGTGTTGCGTGGTTTAGATCTCATTaGCAAAAGCTTGATCTCCTT +
Preference number: 4 (lower is better)
Translates to: VCSRAVLRLSATEPTCVAWFRSH*QKLDLL
Trigger: AAGGAGATCAAGCTTTTGGCAATGAGATCTAAACCA...CGCAACACAGGTGGGCTCGGTGGCGGAGAGGCGCAGCACTGCTCTTGAGCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp CTTCTCGGGGGTGCTGATGGCCCGCTTGGTCACGTGCTCAATCTCGCCATTCGACTGCATGACTACATTTaGCAAGGCCATGTCATCTTC +
Preference number: 4 (lower is better)
Translates to: LLGGADGPLGHVLNLAIRLHDYI*QGHVIF
Trigger: GAAGATGACATGGCCTTGGCAAATGTAGTCATGCAG...TCGAATGGCGAGATTGAGCACGTGACCAAGCGGGCCATCAGCACCCCCGAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp GCTCAGGGACATGGGCCTGGCTTTGGGCAGCAACCTCTGCAATGGCCCTGTTTCCTTGATTGGCTACACTaGCTGGTACTTCTAGTAGCA +
Preference number: 4 (lower is better)
Translates to: AQGHGPGFGQQPLQWPCFLDWLH*LVLLVA
Trigger: TGCTACTAGAAGTACCAGGCAGTGTAGCCAATCAAG...GAAACAGGGCCATTGCAGAGGTTGCTGCCCAAAGCCAGGCCCATGTCCCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp AAACGTGACATCACTGATGCTCTTCTCGGGGGTGCTGATGGCCCGCTTGGTCACACCTTGGCACAGATGTaGTGCAGTAAGATACGGACG +
Preference number: 4 (lower is better)
Translates to: KRDITDALLGGADGPLGHTLAQM*CSKIRT
Trigger: CGTCCGTATCTTACTGCAGCACATCTGTGCCAAGGT...GTGACCAAGCGGGCCATCAGCACCCCCGAGAAGAGCATCAGTGATGTCACGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp CCCTCAGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGGTTGTCATAGTGATATGCAAAGCTGGACAGTaGCTTGCTGCGGACAGTAGG +
Preference number: 4 (lower is better)
Translates to: PSALGIHAPASFLVVIVICKAGQ*LAADSR
Trigger: CCTACTGTCCGCAGCAAGGCACTGTCCAGCTTTGCA...TATCACTATGACAACCAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCTGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp TGGCGGCCAGTCCAGCCTTTTAAAGAACGTCAGGTGGAGCAGCCAGGTGAAAGGCAACTCCAGACAGTGTaGAAAGCTGGACAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: WRPVQPFKERQVEQPGERQLQTV*KAGQCL
Trigger: AAGGCACTGTCCAGCTTTGCACACTGTCTGGAGTTG...CCTTTCACCTGGCTGCTCCACCTGACGTTCTTTAAAAGGCTGGACTGGCCGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp GGTGGGAGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTGCTCTACAAAGCCTCTaGAAGGCGTCAACAGCTGAA +
Preference number: 4 (lower is better)
Translates to: GGRRCLVGCFQRGLSEGPALQSL*KASTAE
Trigger: TTCAGCTGTTGACGCCTTGCAGAGGCTTTGTAGAGC...AGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCTCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp GGCAGCACTCCTAAGCTCCGACTCCGATGCCTGCTCTTTGACTCCACGGCTTTCTGGTGTCTCTGCAGATaGTCTACAAAGCCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: GSTPKLRLRCLLFDSTAFWCLCR*STKPLQ
Trigger: TTGCAGAGGCTTTGTAGAGCATCTGCAGAGACACCA...GAAAGCCGTGGAGTCAAAGAGCAGGCATCGGAGTCGGAGCTTAGGAGTGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp TGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATTCCACTGCTGAGCTCTGCTGGTGTCTCTaGAGATGCTCTACAAAGCCT +
Preference number: 4 (lower is better)
Translates to: CRLECLYSWRETAHSTAELCWCL*RCSTKP
Trigger: AGGCTTTGTAGAGCATCTGCAGAGACACCAGCAGAG...CTCAGCAGTGGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp TGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCGAATCAGAAGGAAGATaGGCTTCTCCACCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: CLVGCFQRGLSEGPPAAGESEGR*ASPPWL
Trigger: CAGCCAGGGTGGAGAAGCGCATCTTCCTTCTGATTC...GCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp ACTGGTGTCTTCCATGTAGCGTCCCAGCTTTGGGCTCCTGTAACAGACCTCTTTACGCTGGGGCCTCACTaGTGCCTTGAGATGATGGTG +
Preference number: 4 (lower is better)
Translates to: TGVFHVASQLWAPVTDLFTLGPH*CLEMMV
Trigger: CACCATCATCTCAAGGCAGCAGTGAGGCCCCAGCGT...AAAGAGGTCTGTTACAGGAGCCCAAAGCTGGGACGCTACATGGAAGACACCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp GCTGTTCCCCCATCATGGGAGCAGCCCTTAACAGAGGGCTGCACAAATCGGCAGTTTGCCAGATCCTCGTaGTGTAAGCACAGCTTACCT +
Preference number: 4 (lower is better)
Translates to: AVPPSWEQPLTEGCTNRQFARSS*CKHSLP
Trigger: AGGTAAGCTGTGCTTACAGCACGAGGATCTGGCAAA...CTGCCGATTTGTGCAGCCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp TGGTGGGAGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCAGCAAGATGAGTGTCTaGTTCCGGATGAATGGGTCG +
Preference number: 4 (lower is better)
Translates to: WWEALFSWLFSEGSFGGTSKMSV*FRMNGS
Trigger: CGACCCATTCATCCGGAAGCAGACACTCATCTTGCT...GGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCTCCCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp AAACGTGACATCACTGATGCTCTTCTCGGGGGTGCTGATGGCCCGCTTGGTCACAGCAAGATGAGTGTCTaGTTCCGGATGAATGGGTCG +
Preference number: 4 (lower is better)
Translates to: KRDITDALLGGADGPLGHSKMSV*FRMNGS
Trigger: CGACCCATTCATCCGGAAGCAGACACTCATCTTGCT...GTGACCAAGCGGGCCATCAGCACCCCCGAGAAGAGCATCAGTGATGTCACGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp CCCTCAGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGGTTGTCATAGTGATATCAGGATTGCAATGGTaGTCAGGGACATGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PSALGIHAPASFLVVIVISGLQW*SGTWAW
Trigger: CCAGGCCCATGTCCCTGAGCACCATTGCAATCCTGA...TATCACTATGACAACCAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCTGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp CTGGGATGCTCTTCTTTGCCAGATCCTCGTGCTGTAAGCACAGCTTACCTAAGGGGGCGGGCCGAAAAGTaGAAGCCAAACAAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LGCSSLPDPRAVSTAYLRGRAEK*KPNKAP
Trigger: AGGAGCCTTGTTTGGCTTCCACTTTTCGGCCCGCCC...CCTTAGGTAAGCTGTGCTTACAGCACGAGGATCTGGCAAAGAAGAGCATCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR CCA 90 bp GATGGCCCGCTTGGTCACGTGCTCAATCTCGCCATTCGACTCTTGCTCCAAACTGCCGAGTCGTTCCTGTaGACCAATCACAACGTACAG +
Preference number: 4 (lower is better)
Translates to: DGPLGHVLNLAIRLLLQTAESFL*TNHNVQ
Trigger: CTGTACGTTGTGATTGGTCCACAGGAACGACTCGGC...AGTTTGGAGCAAGAGTCGAATGGCGAGATTGAGCACGTGACCAAGCGGGCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp CTTGGGCCCTGGCAGTGGCTGTGTCCCAGTGAGCTTTACTCACGTGGCCCTTGCGCCACCAGTGTACTATaGGAAACATTGTTCTCAATG +
Preference number: 4 (lower is better)
Translates to: LGPWQWLCPSELYSRGPCATSVL*ETLFSM
Trigger: CATTGAGAACAATGTTTCCCATAGTACACTGGTGGC...GCAAGGGCCACGTGAGTAAAGCTCACTGGGACACAGCCACTGCCAGGGCCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp GCTCAGGGACATGGGCCTGGCTTTGGGCAGCAACCTCTGCAATGGCCCTGTTTCGGTGGAATACTTGATTaGCTACACTGCCTGGTACTT +
Preference number: 4 (lower is better)
Translates to: AQGHGPGFGQQPLQWPCFGGILD*LHCLVL
Trigger: AAGTACCAGGCAGTGTAGCCAATCAAGTATTCCACC...GAAACAGGGCCATTGCAGAGGTTGCTGCCCAAAGCCAGGCCCATGTCCCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp AGGGATGGCTCCCCACCCTCAGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGTTCAAGTTAGATTCCTaGGGCCAGCTCTTCTTTAGA +
Preference number: 4 (lower is better)
Translates to: RDGSPPSALGIHAPASFLFKLDS*GQLFFR
Trigger: TCTAAAGAAGAGCTGGCCCCAGGAATCTAACTTGAA...CAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCTGAGGGTGGGGAGCCATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp GGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGCAATATCTTCTCTCCTaGGTGGCTTTCCCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: GVFRRDLLLQAGVSLFLAQYLLS*VAFPFF
Trigger: GAAAAAGGGGAAAGCCACCCAGGAGAGAAGATATTG...CGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp TCGTGTTCCACAGCAAAGCGCTGCCCAAGGACTGCGGGAAGTGATCCAGCTGCCCAATATCTTCTCTCCTaGGTGGCTTTCCCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: SCSTAKRCPRTAGSDPAAQYLLS*VAFPFF
Trigger: GAAAAAGGGGAAAGCCACCCAGGAGAGAAGATATTG...GGCAGCTGGATCACTTCCCGCAGTCCTTGGGCAGCGCTTTGCTGTGGAACACGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000534532.6
ENST00000534548.7
CDS-3UTR CCA 90 bp AAACGTGACATCACTGATGCTCTTCTCGGGGGTGCTGATGGCCCGCTTGGTCACCTACAGTTGATGACTTaGGAGGTAACAGCAAGGGGG +
Preference number: 4 (lower is better)
Translates to: KRDITDALLGGADGPLGHLQLMT*EVTARG
Trigger: CCCCCTTGCTGTTACCTCCCAAGTCATCAACTGTAG...GTGACCAAGCGGGCCATCAGCACCCCCGAGAAGAGCATCAGTGATGTCACGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp AACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCCTTAACAGAGGGCTTCTCCACCCTGGCTaGACACAGCTGGGCTATATC +
Preference number: 4 (lower is better)
Translates to: NRRDSSCSPIMGAALNRGLLHPG*TQLGYI
Trigger: GATATAGCCCAGCTGTGTCCAGCCAGGGTGGAGAAG...CCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp ACGGCTTTCTTGACAGAATTCAGGATTGCAATGGTGCTCAGGGACATGGGCCTGCTCTCGCACCAGGGCTaGGATGCTCTTCTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: TAFLTEFRIAMVLRDMGLLSHQG*DALLCQ
Trigger: CTGGCAAAGAAGAGCATCCCAGCCCTGGTGCGAGAG...CAGGCCCATGTCCCTGAGCACCATTGCAATCCTGAATTCTGTCAAGAAAGCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp GCTGTTCCCCCATCATGGGAGCAGCCCTTAACAGAGGGCTGCACAAATCGGCAGAAAACTCCCCGAAGCTaGCAATGTCTGGGTGTGAAT +
Preference number: 4 (lower is better)
Translates to: AVPPSWEQPLTEGCTNRQKTPRS*QCLGVN
Trigger: ATTCACACCCAGACATTGCCAGCTTCGGGGAGTTTT...CTGCCGATTTGTGCAGCCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp CGACTCCGATGCCTGCTCTTTGACTCCACGGCTTTCTTGACAGAATTCAGGATTTGGTGCTCAGGGACATaGGCCTGGCTTTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: RLRCLLFDSTAFLTEFRIWCSGT*AWLWAA
Trigger: TGCTGCCCAAAGCCAGGCCCATGTCCCTGAGCACCA...AATCCTGAATTCTGTCAAGAAAGCCGTGGAGTCAAAGAGCAGGCATCGGAGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp GAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGAGTGCTCTCTCTGACTaGGGGAACTTGTTGTACTTC +
Preference number: 4 (lower is better)
Translates to: EGSFGGTSCCRLECLYSWSALSD*GNLLYF
Trigger: GAAGTACAACAAGTTCCCCCAGTCAGAGAGAGCACT...CCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534532.6
CDS-3UTR CCA 90 bp CGAGGCCGATACGAGGCTGTGATTCTGCCTTTGGATGGATGTTGCTGTACACAGCACTTGGGATGGCAGTaGGCAGATCTCAGTGGCATC +
Preference number: 4 (lower is better)
Translates to: RGRYEAVILPLDGCCCTQHLGWQ*ADLSGI
Trigger: GATGCCACTGAGATCTGCCCACTGCCATCCCAAGTG...CTGTGTACAGCAACATCCATCCAAAGGCAGAATCACAGCCTCGTATCGGCCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp GGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGTTCCAGAATTTAAAGTaGAAGGCAGCACTCCTAAGC +
Preference number: 4 (lower is better)
Translates to: GVFRRDLLLQAGVSLFLAFQNLK*KAALLS
Trigger: GCTTAGGAGTGCTGCCTTTCACTTTAAATTCTGGAA...CGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp GGGAGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTAAGCTTGATCTCCTTTaGGCTGAGGACCTCAAACGT +
Preference number: 4 (lower is better)
Translates to: GRRCLVGCFQRGLSEGPPKLDLL*AEDLKR
Trigger: ACGTTTGAGGTCCTCAGCTCAAAGGAGATCAAGCTT...AGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp CACTGTTCCTCTTTGCCACAGAGAAAGCACCCAGACGCCACAGGCTCTGTCGCAAAGCTTGATCTCCTTTaGGCTGAGGACCTCAAACGT +
Preference number: 4 (lower is better)
Translates to: HCSSLPQRKHPDATGSVAKLDLL*AEDLKR
Trigger: ACGTTTGAGGTCCTCAGCTCAAAGGAGATCAAGCTT...TGCGACAGAGCCTGTGGCGTCTGGGTGCTTTCTCTGTGGCAAAGAGGAACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp AGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTTCTGAGCTTCCTGCATaGCTACATTTGCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: RRCLVGCFQRGLSEGPPASELPA*LHLPRP
Trigger: TGGCCTTGGCAAATGTAGTCATGCAGGAAGCTCAGA...AGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp CCACCTGTGTTGCGGTTCCCACTTGGGATGGCAGTGGGCAGATCTCAGTGGCATTCTGAACTTGTGAGATaGGCTTCTTCTGAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: PPVLRFPLGMAVGRSQWHSELVR*ASSELP
Trigger: AGGAAGCTCAGAAGAAGCTCATCTCACAAGTTCAGA...ATGCCACTGAGATCTGCCCACTGCCATCCCAAGTGGGAACCGCAACACAGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp TGGTGGGAGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCCTGCAAAGAAGTCCTTaGGCTCATCTCGGTAATCCT +
Preference number: 4 (lower is better)
Translates to: WWEALFSWLFSEGSFGGTLQRSP*AHLGNP
Trigger: AGGATTACCGAGATGAGCTCAAGGACTTCTTTGCAG...GGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCTCCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp AGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTACTGGGTGGAATACTTaGTTGGCTACACTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: RRCLVGCFQRGLSEGPPATGWNT*LATLPG
Trigger: ACCAGGCAGTGTAGCCAATCAAGTATTCCACCCAGT...AGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp CCCACTAGTGCTAACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCACTGGGTGGAATACTTaGTTGGCTACACTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: PTSANRRDSSCSPIMGAATGWNT*LATLPG
Trigger: ACCAGGCAGTGTAGCCAATCAAGTATTCCACCCAGT...GGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTTAGCACTAGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp CCTCCAGCCGTCCCGGCCACATCTGCATGTTTTGCTAGCTCCTGCTCCTGGACCAAAAGTACGATACTCTaGTTTATCTACCACCTTGGC +
Preference number: 4 (lower is better)
Translates to: PPAVPATSACFASSCSWTKSTIL*FIYHLG
Trigger: GCCAAGGTGGTAGATAAATCAGAGTATCGTACTTTT...GGTCCAGGAGCAGGAGCTAGCAAAACATGCAGATGTGGCCGGGACGGCTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp TGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCCACAAGGAAGTTTACTaGGCAGCTGGACTAGGGACT +
Preference number: 4 (lower is better)
Translates to: CLVGCFQRGLSEGPPAAGHKEVY*AAGLGT
Trigger: AGTCCCTAGTCCAGCTGCTCAGTAAACTTCCTTGTG...GCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp GATGACGTTGTTGCGGACAGCCACGTCCTCACACACCTCGAGCTCTCGCACCAGAGTAAGGTACCAGGGTaGCTCTCTATTACAGAAAAC +
Preference number: 4 (lower is better)
Translates to: DDVVADSHVLTHLELSHQSKVPG*LSITEN
Trigger: GTTTTCTGTAATAGAGAGTCACCCTGGTACCTTACT...CTGGTGCGAGAGCTCGAGGTGTGTGAGGACGTGGCTGTCCGCAACAACGTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR TCA 90 bp GTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATATGTTGATCTCCCCTaGGGGTTCGGAACGGTTAGA +
Preference number: 4 (lower is better)
Translates to: VFRGVFRRDLLLQAGVSLYVDLP*GFGTVR
Trigger: TCTAACCGTTCCGAACCCTCAGGGGAGATCAACATA...TAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp GAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGTTCTCAGCATTGCCATaGCACATCTTTCTCCAGATC +
Preference number: 4 (lower is better)
Translates to: EGSFGGTSCCRLECLYSWFSALP*HIFLQI
Trigger: GATCTGGAGAAAGATGTGTCATGGCAATGCTGAGAA...CCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp CAGCCGTCCCGGCCACATCTGCATGTTTTGCTAGCTCCTGCTCCTGGACCAGCTGATTCTGCTGACTGCTaGTTTTCTCCCAAGATTGTA +
Preference number: 4 (lower is better)
Translates to: QPSRPHLHVLLAPAPGPADSADC*FSPKIV
Trigger: TACAATCTTGGGAGAAAATCAGCAGTCAGCAGAATC...AGCTGGTCCAGGAGCAGGAGCTAGCAAAACATGCAGATGTGGCCGGGACGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp CCACCTGTGTTGCGGTTCCCACTTGGGATGGCAGTGGGCAGATCTCAGTGGCATGAATTGGGATTCTGCTaGCTGCTGATTTTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: PPVLRFPLGMAVGRSQWHELGFC*LLIFSQ
Trigger: TTGGGAGAAAATCAGCAGTCAGCAGAATCCCAATTC...ATGCCACTGAGATCTGCCCACTGCCATCCCAAGTGGGAACCGCAACACAGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp CAGCCGTCCCGGCCACATCTGCATGTTTTGCTAGCTCCTGCTCCTGGACCAGCTCATTCAGCTTACACTTaGCAGCATCAGTCACTTTGT +
Preference number: 4 (lower is better)
Translates to: QPSRPHLHVLLAPAPGPAHSAYT*QHQSLC
Trigger: ACAAAGTGACTGATGCTGTCAAGTGTAAGCTGAATG...AGCTGGTCCAGGAGCAGGAGCTAGCAAAACATGCAGATGTGGCCGGGACGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp AAGGGCTCCTGCCTGCCTGGACACTGGTGGGAGGCGCTGTTTAGTTGGCTGTTTACCTCTAGAGACCACTaGAATCCATTCAGCTTACAC +
Preference number: 4 (lower is better)
Translates to: KGSCLPGHWWEALFSWLFTSRDH*NPFSLH
Trigger: GTGTAAGCTGAATGGATTTCAGTGGTCTCTAGAGGT...AAACAGCCAACTAAACAGCGCCTCCCACCAGTGTCCAGGCAGGCAGGAGCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp TGTCTGAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATGCCATCAGCAACGTCAACAGCTGAACTaGTCACCTCTAGAGACCACT +
Preference number: 4 (lower is better)
Translates to: CLRVTHWRPGPGVGCHQQRQQLN*SPLETT
Trigger: AGTGGTCTCTAGAGGTGATCAGTTCAGCTGTTGACG...TTGCTGATGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp TGTCTGAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATGCCATCAGCAACTGTTCCATTCTCCTTaGGAACGATGTTGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: CLRVTHWRPGPGVGCHQQLFHSP*ERCWRG
Trigger: GCCTCTCCAACATCGTTCTCAAGGAGAATGGAACAG...TTGCTGATGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp GAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGTATACTTGTCCACCATaGTGGTGTAGCGAATGCAGA +
Preference number: 4 (lower is better)
Translates to: EGSFGGTSCCRLECLYSWYTCPP*WCSECR
Trigger: TCTGCATTCGCTACACCATCATGGTGGACAAGTATA...CCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp TCAAACGTGTCTGAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATGCCAATCGCTGTTCATCTGTaGAGTGCTCTCTCTGACTGG +
Preference number: 4 (lower is better)
Translates to: SNVSESNSLASRSRGRMPIAVHL*SALSDW
Trigger: CCAGTCAGAGAGAGCACTTCACAGATGAACAGCGAT...TGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTCAGACACGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534532.6
CDS-3UTR TCA 90 bp CCCTCAGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGGTTGTCATAGTGATAAAAGCAAGGAGCTGCTaGGAAGGAGCACTCCACTGT +
Preference number: 4 (lower is better)
Translates to: PSALGIHAPASFLVVIVIKARSC*EGALHC
Trigger: ACAGTGGAGTGCTCCTTCTCAGCAGCTCCTTGCTTT...TATCACTATGACAACCAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp CCCACTAGTGCTAACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCTTTCAAAACAAACCATaGTGGAGTGGCGGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: PTSANRRDSSCSPIMGAAFQNKP*WSGGQS
Trigger: GGACTGGCCGCCACTCCATCATGGTTTGTTTTGAAA...GGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTTAGCACTAGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp AGTGCTAACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCCTTAACTCCGACTCCGATGCCTaGTCTTTGACTCCACGGCTT +
Preference number: 4 (lower is better)
Translates to: SANRRDSSCSPIMGAALNSDSDA*SLTPRL
Trigger: AAGCCGTGGAGTCAAAGAGCAGGCATCGGAGTCGGA...GTTAAGGGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTTAGCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp GGGAGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTAGAAGACAAGACAACTaGAGTTCTGTAGGGACTGCG +
Preference number: 4 (lower is better)
Translates to: GRRCLVGCFQRGLSEGPPRRQDN*SSVGTA
Trigger: CGCAGTCCCTACAGAACTGCAGTTGTCTTGTCTTCT...AGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534532.6
CDS-3UTR GCA 90 bp AGGTCCAGGGGTAGGATGCCATCAGCAAAGCACGCCAAAATACTAAGGCAGATTTGCGTGTCAAAGGGCTaGCTTTCCCGTCAGCACTCG +
Preference number: 4 (lower is better)
Translates to: RSRGRMPSAKHAKILRQICVSKG*LSRQHS
Trigger: CGAGTGCTGACGGGAAAGGCAGCCCTTTGACACGCA...AATCTGCCTTAGTATTTTGGCGTGCTTTGCTGATGGCATCCTACCCCTGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534532.6
CDS-3UTR GCA 90 bp ATGACTACATTTGCCAAGGCCATGTCATCTTCTTCCATAAGGAGGTCTTTGTCTAGCGGACACCAGGGCTaGAGGCCGCTACCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: MTTFAKAMSSSSIRRSLSSGHQG*RPLPRP
Trigger: GGGCCTTGGTAGCGGCCTGCAGCCCTGGTGTCCGCT...AGACAAAGACCTCCTTATGGAAGAAGATGACATGGCCTTGGCAAATGTAGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp CTGGGATGCTCTTCTTTGCCAGATCCTCGTGCTGTAAGCACAGCTTACCTAAGGTGCAAAGCTGGACAGTaGCTTGCTGCGGACAGTAGG +
Preference number: 4 (lower is better)
Translates to: LGCSSLPDPRAVSTAYLRCKAGQ*LAADSR
Trigger: CCTACTGTCCGCAGCAAGGCACTGTCCAGCTTTGCA...CCTTAGGTAAGCTGTGCTTACAGCACGAGGATCTGGCAAAGAAGAGCATCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR GCA 90 bp AGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTCAACTCCAGACAGTGTaGAAAGCTGGACAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: RRCLVGCFQRGLSEGPPAQLQTV*KAGQCL
Trigger: AAGGCACTGTCCAGCTTTGCACACTGTCTGGAGTTG...AGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp TCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATTCCACTTTTGCCAGATCCTCGTaGTGTAAGCACAGCTTACCT +
Preference number: 4 (lower is better)
Translates to: SCCRLECLYSWRETAHSTFARSS*CKHSLP
Trigger: AGGTAAGCTGTGCTTACAGCACGAGGATCTGGCAAA...AGTGGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp CTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGAGACAGAATTCAGGATTaGAATGGTGCTCAGGGACAT +
Preference number: 4 (lower is better)
Translates to: LSEGPPAAGWSVFIPGGRDRIQD*NGAQGH
Trigger: ATGTCCCTGAGCACCATTGCAATCCTGAATTCTGTC...TCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp GCTTTCTTGACAGAATTCAGGATTGCAATGGTGCTCAGGGACATGGGCCTGGCTGGAGGGACCTCCTGCTaGAGGCTGGAGTGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: AFLTEFRIAMVLRDMGLAGGTSC*RLECLY
Trigger: ATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCC...AGCCAGGCCCATGTCCCTGAGCACCATTGCAATCCTGAATTCTGTCAAGAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp CCCACTAGTGCTAACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCAGTTCCCTCCATCATTaGCACCTTGGTAGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: PTSANRRDSSCSPIMGAASSLHH*HLGREG
Trigger: TCCCTCTCTACCAAGGTGGCAATGATGGAGGGAACT...GGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTTAGCACTAGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp TGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATTCCACTGCTGAGTCTCTGCTTCTATGCTaGGATCCAAAGGCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: CRLECLYSWRETAHSTAESLLLC*DPKAQS
Trigger: AGACTGAGCCTTTGGATCCCAGCATAGAAGCAGAGA...CTCAGCAGTGGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp AAGTCGTTCTGCAAAAGTGTGGGGGATGGGCTGGCACAGTTAACATCAGAAAGCGGGCGGGCCGAAAAGTaGAAGCCAAACAAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: KSFCKSVGDGLAQLTSESGRAEK*KPNKAP
Trigger: AGGAGCCTTGTTTGGCTTCCACTTTTCGGCCCGCCC...GCTTTCTGATGTTAACTGTGCCAGCCCATCCCCCACACTTTTGCAGAACGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526422.2
CDS-3UTR CCA 90 bp AGGTCCAGGGGTAGGATGCCATCAGCAAAGCACGCCAAAATACTAAGGCAGATTGCTAGCTCCTGCTCCTaGACCAGCTGTTCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: RSRGRMPSAKHAKILRQIASSCS*TSCSWY
Trigger: GTACCAGGAACAGCTGGTCCAGGAGCAGGAGCTAGC...AATCTGCCTTAGTATTTTGGCGTGCTTTGCTGATGGCATCCTACCCCTGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp GGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATGCCACCAGTGTACTATaGGAAACATTGTTCTCAATG +
Preference number: 4 (lower is better)
Translates to: GTSCCRLECLYSWRETAHATSVL*ETLFSM
Trigger: CATTGAGAACAATGTTTCCCATAGTACACTGGTGGC...ATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp TCGTGTTCCACAGCAAAGCGCTGCCCAAGGACTGCGGGAAGTGATCCAGCTGCCGCCACCAGTGTACTATaGGAAACATTGTTCTCAATG +
Preference number: 4 (lower is better)
Translates to: SCSTAKRCPRTAGSDPAAATSVL*ETLFSM
Trigger: CATTGAGAACAATGTTTCCCATAGTACACTGGTGGC...GGCAGCTGGATCACTTCCCGCAGTCCTTGGGCAGCGCTTTGCTGTGGAACACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534532.6
ENST00000534548.7
CDS-3UTR CCA 90 bp TGTCTGAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATGCCATCAGCAACTACAGTTGATGACTTaGGAGGTAACAGCAAGGGGG +
Preference number: 4 (lower is better)
Translates to: CLRVTHWRPGPGVGCHQQLQLMT*EVTARG
Trigger: CCCCCTTGCTGTTACCTCCCAAGTCATCAACTGTAG...TTGCTGATGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTCAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp TCGTGTTCCACAGCAAAGCGCTGCCCAAGGACTGCGGGAAGTGATCCAGCTGCCATTTATCTACCACCTTaGCACAGATGTGCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: SCSTAKRCPRTAGSDPAAIYLPP*HRCAAV
Trigger: TACTGCAGCACATCTGTGCCAAGGTGGTAGATAAAT...GGCAGCTGGATCACTTCCCGCAGTCCTTGGGCAGCGCTTTGCTGTGGAACACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534532.6
ENST00000534548.7
CDS-3UTR CCA 90 bp AATTCAGGATTGCAATGGTGCTCAGGGACATGGGCCTGGCTTTGGGCAGCAACCAGCTGGACTAGGGACTaGGCTGCAAAAGTACGATAC +
Preference number: 4 (lower is better)
Translates to: NSGLQWCSGTWAWLWAATSWTRD*AAKVRY
Trigger: GTATCGTACTTTTGCAGCCCAGTCCCTAGTCCAGCT...GGTTGCTGCCCAAAGCCAGGCCCATGTCCCTGAGCACCATTGCAATCCTGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp GATGGCCCGCTTGGTCACGTGCTCAATCTCGCCATTCGACTCTTGCTCCAAACTCCCGGTGTGGGATCTTaGAACTTCGGGAGTATTTGT +
Preference number: 4 (lower is better)
Translates to: DGPLGHVLNLAIRLLLQTPGVGS*NFGSIC
Trigger: ACAAATACTCCCGAAGTTCCAAGATCCCACACCGGG...AGTTTGGAGCAAGAGTCGAATGGCGAGATTGAGCACGTGACCAAGCGGGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp TGTCTGAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATGCCATCAGCAACCCGGTGTGGGATCTTaGAACTTCGGGAGTATTTGT +
Preference number: 4 (lower is better)
Translates to: CLRVTHWRPGPGVGCHQQPGVGS*NFGSIC
Trigger: ACAAATACTCCCGAAGTTCCAAGATCCCACACCGGG...TTGCTGATGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp AGTGCTAACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCCTTAACGACAGTGTGCAAAGCTaGACAGTGCCTTGCTGCGGA +
Preference number: 4 (lower is better)
Translates to: SANRRDSSCSPIMGAALNDSVQS*TVPCCG
Trigger: TCCGCAGCAAGGCACTGTCCAGCTTTGCACACTGTC...GTTAAGGGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTTAGCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp TCAAACGTGTCTGAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATGCCACTGCTTCCGGATGAATaGGTCGGAATCCTTCAGACA +
Preference number: 4 (lower is better)
Translates to: SNVSESNSLASRSRGRMPLLPDE*VGILQT
Trigger: TGTCTGAAGGATTCCGACCCATTCATCCGGAAGCAG...TGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTCAGACACGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp GAGCTTCTTCTGAGCTTCCTGCATGACTACATTTGCCAAGGCCATGTCATCTTCTGGTGCTCAGGGACATaGGCCTGGCTTTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: ELLLSFLHDYICQGHVIFWCSGT*AWLWAA
Trigger: TGCTGCCCAAAGCCAGGCCCATGTCCCTGAGCACCA...GAAGATGACATGGCCTTGGCAAATGTAGTCATGCAGGAAGCTCAGAAGAAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp TCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATTCCACTCTTCAATTTTCTCTTTaGCTGACGACGGAGTCCGTG +
Preference number: 4 (lower is better)
Translates to: SCCRLECLYSWRETAHSTLQFSL*LTTESV
Trigger: CACGGACTCCGTCGTCAGCCAAAGAGAAAATTGAAG...AGTGGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp ATTGGTAAGCAAGATGAGTGTCTGCTTCCGGATGAATGGGTCGGAATCCTTCAGCCACTGCTGAGGCTGTaGGGGCGGTTTATCAGGCAG +
Preference number: 4 (lower is better)
Translates to: IGKQDECLLPDEWVGILQPLLRL*GRFIRQ
Trigger: CTGCCTGATAAACCGCCCCCACAGCCTCAGCAGTGG...CTGAAGGATTCCGACCCATTCATCCGGAAGCAGACACTCATCTTGCTTACCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR CCA 90 bp CGACTCCGATGCCTGCTCTTTGACTCCACGGCTTTCTTGACAGAATTCAGGATTCTGCCTGGACACTGGTaGGAGGCGCTGTTTAGTTGG +
Preference number: 4 (lower is better)
Translates to: RLRCLLFDSTAFLTEFRILPGHW*EALFSW
Trigger: CCAACTAAACAGCGCCTCCCACCAGTGTCCAGGCAG...AATCCTGAATTCTGTCAAGAAAGCCGTGGAGTCAAAGAGCAGGCATCGGAGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp CACTGTTCCTCTTTGCCACAGAGAAAGCACCCAGACGCCACAGGCTCTGTCGCATGCTGCATGGCATCCTaGATGCTTAGCATGCAAGTT +
Preference number: 4 (lower is better)
Translates to: HCSSLPQRKHPDATGSVACCMAS*MLSMQV
Trigger: AACTTGCATGCTAAGCATCCAGGATGCCATGCAGCA...TGCGACAGAGCCTGTGGCGTCTGGGTGCTTTCTCTGTGGCAAAGAGGAACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CAA 72 bp TCCATATTCCCTGTTCCATTCTCCTTGAGAACGATGTaGGAGAGGCGGTGCTCGCAGGTGGAGAGTACATCC +
Preference number: 4 (lower is better)
Translates to: SIFPVPFSLRTM*ERRCSQVESTS
Trigger: GGATGTACTCTCCACCTGCGAGCACCGCCTCTCCAACATCGTTCTCAAGGAGAATGGAACAGGGAATATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR CAA 72 bp AACAGGTCTTCGTCCATATTCCCTGTTCCATTCTCCTaGAGAACGATGTTGGAGAGGCGGTGCTCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: NRSSSIFPVPFS*RTMLERRCSQV
Trigger: CACCTGCGAGCACCGCCTCTCCAACATCGTTCTCAAGGAGAATGGAACAGGGAATATGGACGAAGACCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
3UTR CAA 72 bp CGACTCCGATGCCTGCTCTTTGACTCCACGGCTTTCTaGACAGAATTCAGGATTGCAATGGTGCTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: RLRCLLFDSTAF*TEFRIAMVLRD
Trigger: GTCCCTGAGCACCATTGCAATCCTGAATTCTGTCAAGAAAGCCGTGGAGTCAAAGAGCAGGCATCGGAGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp AATTCAGGATTGCAATGGTGCTCAGGGACATGGGCCTGGCTTTGGGCAGCAACCTTGCTCCAAACTGTATaGAGACACCTGACTGCACGT +
Preference number: 4 (lower is better)
Translates to: NSGLQWCSGTWAWLWAATLLQTV*RHLTAR
Trigger: ACGTGCAGTCAGGTGTCTTCATACAGTTTGGAGCAA...GGTTGCTGCCCAAAGCCAGGCCCATGTCCCTGAGCACCATTGCAATCCTGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp GATGGCCCGCTTGGTCACGTGCTCAATCTCGCCATTCGACTCTTGCTCCAAACTCGTAATATCCGAATGTaGAAGGCAGCCCAACGTGTA +
Preference number: 4 (lower is better)
Translates to: DGPLGHVLNLAIRLLLQTRNIRM*KAAQRV
Trigger: TACACGTTGGGCTGCCTTTCACATTCGGATATTACG...AGTTTGGAGCAAGAGTCGAATGGCGAGATTGAGCACGTGACCAAGCGGGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534532.6
CDS-3UTR TCA 90 bp AATTCAGGATTGCAATGGTGCTCAGGGACATGGGCCTGGCTTTGGGCAGCAACCATGGCATTTCGAATTTaGGAAAGGTCCCGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: NSGLQWCSGTWAWLWAATMAFRI*ERSRAE
Trigger: TTCTGCCCGGGACCTTTCTCAAATTCGAAATGCCAT...GGTTGCTGCCCAAAGCCAGGCCCATGTCCCTGAGCACCATTGCAATCCTGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp AACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCCTTAACAGAGGGTCTGAGCTTCCTGCATaGCTACATTTGCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: NRRDSSCSPIMGAALNRGSELPA*LHLPRP
Trigger: TGGCCTTGGCAAATGTAGTCATGCAGGAAGCTCAGA...CCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp GTTCCTCTTTGCCACAGAGAAAGCACCCAGACGCCACAGGCTCTGTCGCATTTCCTGCAAAGAAGTCCTTaGGCTCATCTCGGTAATCCT +
Preference number: 4 (lower is better)
Translates to: VPLCHRESTQTPQALSHFLQRSP*AHLGNP
Trigger: AGGATTACCGAGATGAGCTCAAGGACTTCTTTGCAG...GAAATGCGACAGAGCCTGTGGCGTCTGGGTGCTTTCTCTGTGGCAAAGAGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp AGGGATGGCTCCCCACCCTCAGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGCTCGATACTGTACACTaGCATTCTTCTTATGAACTA +
Preference number: 4 (lower is better)
Translates to: RDGSPPSALGIHAPASFLLDTVH*HSSYEL
Trigger: TAGTTCATAAGAAGAATGTCAGTGTACAGTATCGAG...CAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCTGAGGGTGGGGAGCCATCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp GGGAGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTTTATCTCCTTCTCCATaGATGGGAGAGCACAGCAAA +
Preference number: 4 (lower is better)
Translates to: GRRCLVGCFQRGLSEGPPLSPSP*MGEHSK
Trigger: TTTGCTGTGCTCTCCCATTCATGGAGAAGGAGATAA...AGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp GCTGTTCCCCCATCATGGGAGCAGCCCTTAACAGAGGGCTGCACAAATCGGCAGAGTAAGGTACCAGGGTaGCTCTCTATTACAGAAAAC +
Preference number: 4 (lower is better)
Translates to: AVPPSWEQPLTEGCTNRQSKVPG*LSITEN
Trigger: GTTTTCTGTAATAGAGAGTCACCCTGGTACCTTACT...CTGCCGATTTGTGCAGCCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp ATGGAGTGGCGGCCAGTCCAGCCTTTTAAAGAACGTCAGGTGGAGCAGCCAGGTACCTCTAGAGACCACTaGAATCCATTCAGCTTACAC +
Preference number: 4 (lower is better)
Translates to: MEWRPVQPFKERQVEQPGTSRDH*NPFSLH
Trigger: GTGTAAGCTGAATGGATTTCAGTGGTCTCTAGAGGT...ACCTGGCTGCTCCACCTGACGTTCTTTAAAAGGCTGGACTGGCCGCCACTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp CACTGTTCCTCTTTGCCACAGAGAAAGCACCCAGACGCCACAGGCTCTGTCGCATATACTTGTCCACCATaGTGGTGTAGCGAATGCAGA +
Preference number: 4 (lower is better)
Translates to: HCSSLPQRKHPDATGSVAYTCPP*WCSECR
Trigger: TCTGCATTCGCTACACCATCATGGTGGACAAGTATA...TGCGACAGAGCCTGTGGCGTCTGGGTGCTTTCTCTGTGGCAAAGAGGAACAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp ACGGCTTTCTTGACAGAATTCAGGATTGCAATGGTGCTCAGGGACATGGGCCTGGTGTCTGCTTCCGGATaGATGGGTCGGAATCCTTCA +
Preference number: 4 (lower is better)
Translates to: TAFLTEFRIAMVLRDMGLVSASG*MGRNPS
Trigger: TGAAGGATTCCGACCCATTCATCCGGAAGCAGACAC...CAGGCCCATGTCCCTGAGCACCATTGCAATCCTGAATTCTGTCAAGAAAGCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp ACTGGTGTCTTCCATGTAGCGTCCCAGCTTTGGGCTCCTGTAACAGACCTCTTTCCGCTTCTCTCTCTCTaGCTGGGGGAACTTGTTGTA +
Preference number: 4 (lower is better)
Translates to: TGVFHVASQLWAPVTDLFPLLSL*LGELVV
Trigger: TACAACAAGTTCCCCCAGTCAGAGAGAGAGAAGCGG...AAAGAGGTCTGTTACAGGAGCCCAAAGCTGGGACGCTACATGGAAGACACCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp AACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCCTTAACAGAGGGAATTTTCTCTTTGGCTaGCGACGGAGTCCGTGGTGT +
Preference number: 4 (lower is better)
Translates to: NRRDSSCSPIMGAALNRGNFLFG*RRSPWC
Trigger: ACACCACGGACTCCGTCGTCAGCCAAAGAGAAAATT...CCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp CCACCTGTGTTGCGGTTCCCACTTGGGATGGCAGTGGGCAGATCTCAGTGGCATAAGATGTCATTTCCTTaGCTCCGGCCTTCAATTTTC +
Preference number: 4 (lower is better)
Translates to: PPVLRFPLGMAVGRSQWHKMSFP*LRPSIF
Trigger: GAAAATTGAAGGCCGGAGTCAAGGAAATGACATCTT...ATGCCACTGAGATCTGCCCACTGCCATCCCAAGTGGGAACCGCAACACAGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp AACATCACTCAGAAGCCTGTGTTCTTCAAGAGCAGGTGTTCTCAGCCTCACATGAAGGACTGCGGGAAGTaGTCCAGCTGCCTTCACACG +
Preference number: 4 (lower is better)
Translates to: NITQKPVFFKSRCSQPHMKDCGK*SSCLHT
Trigger: CGTGTGAAGGCAGCTGGATCACTTCCCGCAGTCCTT...CATGTGAGGCTGAGAACACCTGCTCTTGAAGAACACAGGCTTCTGAGTGATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp TCGTGCTGTAAGCACAGCTTACCTAAGGTAATGATGGCATGTGCTCTAATCACAGGCTCGCCGCCGCCGTaGTCAACTTTCAAAGCTCGC +
Preference number: 4 (lower is better)
Translates to: SCCKHSLPKVMMACALITGSPPP*STFKAR
Trigger: GCGAGCTTTGAAAGTTGAGCACGGCGGCGGCGAGCC...TGTGATTAGAGCACATGCCATCATTACCTTAGGTAAGCTGTGCTTACAGCACGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR GCA 90 bp CCTCCAGCCGTCCCGGCCACATCTGCATGTTTTGCTAGCTCCTGCTCCTGGACCATAGAGTTTTGTGAATaGAGCCAATCCAGTCTCTAT +
Preference number: 4 (lower is better)
Translates to: PPAVPATSACFASSCSWTIEFCE*SQSSLY
Trigger: ATAGAGACTGGATTGGCTGCATTCACAAAACTCTAT...GGTCCAGGAGCAGGAGCTAGCAAAACATGCAGATGTGGCCGGGACGGCTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp AAGTCGTTCTGCAAAAGTGTGGGGGATGGGCTGGCACAGTTAACATCAGAAAGCGCCAAACAAGGCTCCTaGGGGTGTTCCGCTAATTCG +
Preference number: 4 (lower is better)
Translates to: KSFCKSVGDGLAQLTSESAKQGS*GCSANS
Trigger: CGAATTAGCGGAACACCCGCAGGAGCCTTGTTTGGC...GCTTTCTGATGTTAACTGTGCCAGCCCATCCCCCACACTTTTGCAGAACGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526422.2
CDS-3UTR GCA 90 bp GAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATGCCATCAGCAAAGCACCAGCTGTTTGTCAACTaGAAAGAAGTCCTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: ESNSLASRSRGRMPSAKHQLFVN*KEVLEL
Trigger: GAGCTCAAGGACTTCTTTGCAGTTGACAAACAGCTG...GTGCTTTGCTGATGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp ATGGAGTGGCGGCCAGTCCAGCCTTTTAAAGAACGTCAGGTGGAGCAGCCAGGTCAGCTGTTTGTCAACTaGAAAGAAGTCCTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: MEWRPVQPFKERQVEQPGQLFVN*KEVLEL
Trigger: GAGCTCAAGGACTTCTTTGCAGTTGACAAACAGCTG...ACCTGGCTGCTCCACCTGACGTTCTTTAAAAGGCTGGACTGGCCGCCACTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp GATGGCCCGCTTGGTCACGTGCTCAATCTCGCCATTCGACTCTTGCTCCAAACTCCTCCTTCTCAGCATTaGCATGACACATCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: DGPLGHVLNLAIRLLLQTPPSQH*HDTSFS
Trigger: GGAGAAAGATGTGTCATGGCAATGCTGAGAAGGAGG...AGTTTGGAGCAAGAGTCGAATGGCGAGATTGAGCACGTGACCAAGCGGGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp CGACTCCGATGCCTGCTCTTTGACTCCACGGCTTTCTTGACAGAATTCAGGATTCCTTCTCCTGCACAGTaGTCTCGCAGTCCATCACCA +
Preference number: 4 (lower is better)
Translates to: RLRCLLFDSTAFLTEFRIPSPAQ*SRSPSP
Trigger: TGGTGATGGACTGCGAGAGCACTGTGCAGGAGAAGG...AATCCTGAATTCTGTCAAGAAAGCCGTGGAGTCAAAGAGCAGGCATCGGAGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp CTCCCTGAGATAGTGCATGAGTTCCCGCAAAGCTGGGATCTTATTTTTCTCCAGCAGCATCCAGGCAGGTaGCGAATGTTCCGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: LPEIVHEFPQSWDLIFLQQHPGR*RMFRAS
Trigger: ACTGGCACGGAACATTCGGCACCTGCCTGGATGCTG...CTGGAGAAAAATAAGATCCCAGCTTTGCGGGAACTCATGCACTATCTCAGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp GGCAGCACTCCTAAGCTCCGACTCCGATGCCTGCTCTTTGACTCCACGGCTTTCAAGATTGTATTATTCTaGTGTAGTCCAGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: GSTPKLRLRCLLFDSTAFKIVLF*CSPAWV
Trigger: CACCCAGGCTGGACTACAGCAGAATAATACAATCTT...GAAAGCCGTGGAGTCAAAGAGCAGGCATCGGAGTCGGAGCTTAGGAGTGCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp GGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGCTTAGGAAGATGCTTTaGAATATGCCCAATCACACA +
Preference number: 4 (lower is better)
Translates to: GVFRRDLLLQAGVSLFLALRKML*NMPNHT
Trigger: TGTGTGATTGGGCATATTGCAAAGCATCTTCCTAAG...CGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp CGAGGCCGATACGAGGCTGTGATTCTGCCTTTGGATGGATGTTGCTGTACACAGCTCTGCTGGTGTCTCTaGAGATGCTCTACAAAGCCT +
Preference number: 4 (lower is better)
Translates to: RGRYEAVILPLDGCCCTQLCWCL*RCSTKP
Trigger: AGGCTTTGTAGAGCATCTGCAGAGACACCAGCAGAG...CTGTGTACAGCAACATCCATCCAAAGGCAGAATCACAGCCTCGTATCGGCCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp CGAGGCCGATACGAGGCTGTGATTCTGCCTTTGGATGGATGTTGCTGTACACAGAGCAAGATGAGTGTCTaGTTCCGGATGAATGGGTCG +
Preference number: 4 (lower is better)
Translates to: RGRYEAVILPLDGCCCTQSKMSV*FRMNGS
Trigger: CGACCCATTCATCCGGAAGCAGACACTCATCTTGCT...CTGTGTACAGCAACATCCATCCAAAGGCAGAATCACAGCCTCGTATCGGCCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp GAGCTTCTTCTGAGCTTCCTGCATGACTACATTTGCCAAGGCCATGTCATCTTCGGTCCAGGGGTAGGATaGCATCAGCAAAGCACGCCA +
Preference number: 4 (lower is better)
Translates to: ELLLSFLHDYICQGHVIFGPGVG*HQQSTP
Trigger: TGGCGTGCTTTGCTGATGGCATCCTACCCCTGGACC...GAAGATGACATGGCCTTGGCAAATGTAGTCATGCAGGAAGCTCAGAAGAAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp AACATCACTCAGAAGCCTGTGTTCTTCAAGAGCAGGTGTTCTCAGCCTCACATGTCCACAGCAAAGCGCTaGCCAAGGACTGCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: NITQKPVFFKSRCSQPHMSTAKR*PRTAGS
Trigger: ACTTCCCGCAGTCCTTGGGCAGCGCTTTGCTGTGGA...CATGTGAGGCTGAGAACACCTGCTCTTGAAGAACACAGGCTTCTGAGTGATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp GTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATCTCTGCTTCTATGCTaGGATCCAAAGGCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: VFRGVFRRDLLLQAGVSLSLLLC*DPKAQS
Trigger: AGACTGAGCCTTTGGATCCCAGCATAGAAGCAGAGA...TAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp CTCTTTGACTCCACGGCTTTCTTGACAGAATTCAGGATTGCAATGGTGCTCAGGGCACGCTCAGAGAACTaGGCGGGCCGAAAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: LFDSTAFLTEFRIAMVLRARSEN*AGRKVE
Trigger: TTCCACTTTTCGGCCCGCCCAGTTCTCTGAGCGTGC...CCTGAGCACCATTGCAATCCTGAATTCTGTCAAGAAAGCCGTGGAGTCAAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp AAGTGTGGGGGATGGGCTGGCACAGTTAACATCAGAAAGCAGCTAAAATACTCCTACAGAATTTCCCACTaGCCAACCACCGCGCCGAGC +
Preference number: 4 (lower is better)
Translates to: KCGGWAGTVNIRKQLKYSYRISH*PTTAPS
Trigger: GCTCGGCGCGGTGGTTGGCCAGTGGGAAATTCTGTA...GGAGTATTTTAGCTGCTTTCTGATGTTAACTGTGCCAGCCCATCCCCCACACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526422.2
CDS-3UTR CCA 90 bp TGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATTCCACTGCTGAGGAGTTCCCGCAAAGCTaGGATCTTATTTTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: CRLECLYSWRETAHSTAEEFPQS*DLIFLQ
Trigger: CTGGAGAAAAATAAGATCCCAGCTTTGCGGGAACTC...CTCAGCAGTGGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp CACTGTTCCTCTTTGCCACAGAGAAAGCACCCAGACGCCACAGGCTCTGTCGCAGAGTTCCCGCAAAGCTaGGATCTTATTTTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: HCSSLPQRKHPDATGSVAEFPQS*DLIFLQ
Trigger: CTGGAGAAAAATAAGATCCCAGCTTTGCGGGAACTC...TGCGACAGAGCCTGTGGCGTCTGGGTGCTTTCTCTGTGGCAAAGAGGAACAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp CACTGTTCCTCTTTGCCACAGAGAAAGCACCCAGACGCCACAGGCTCTGTCGCAGGTGGAATACTTGATTaGCTACACTGCCTGGTACTT +
Preference number: 4 (lower is better)
Translates to: HCSSLPQRKHPDATGSVAGGILD*LHCLVL
Trigger: AAGTACCAGGCAGTGTAGCCAATCAAGTATTCCACC...TGCGACAGAGCCTGTGGCGTCTGGGTGCTTTCTCTGTGGCAAAGAGGAACAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp TGGTGGGAGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCCTCCTTCTCCATGAATaGGAGAGCACAGCAAATACA +
Preference number: 4 (lower is better)
Translates to: WWEALFSWLFSEGSFGGTLLLHE*ESTANT
Trigger: TGTATTTGCTGTGCTCTCCCATTCATGGAGAAGGAG...GGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCTCCCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp CCCTCAGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGGTTGTCATAGTGATAAGCTGGACTAGGGACTaGGCTGCAAAAGTACGATAC +
Preference number: 4 (lower is better)
Translates to: PSALGIHAPASFLVVIVISWTRD*AAKVRY
Trigger: GTATCGTACTTTTGCAGCCCAGTCCCTAGTCCAGCT...TATCACTATGACAACCAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCTGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp AGGTCCAGGGGTAGGATGCCATCAGCAAAGCACGCCAAAATACTAAGGCAGATTTGCTGTAGTCCAGCCTaGGTGAGGAGCCAGCAATCT +
Preference number: 4 (lower is better)
Translates to: RSRGRMPSAKHAKILRQICCSPA*VRSQQS
Trigger: AGATTGCTGGCTCCTCACCCAGGCTGGACTACAGCA...AATCTGCCTTAGTATTTTGGCGTGCTTTGCTGATGGCATCCTACCCCTGGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp CCCTCAGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGGTTGTCATAGTGATACTGCTTCCGGATGAATaGGTCGGAATCCTTCAGACA +
Preference number: 4 (lower is better)
Translates to: PSALGIHAPASFLVVIVILLPDE*VGILQT
Trigger: TGTCTGAAGGATTCCGACCCATTCATCCGGAAGCAG...TATCACTATGACAACCAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCTGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp GTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTAAAAACTCCCCGAAGCTaGCAATGTCTGGGTGTGAAT +
Preference number: 4 (lower is better)
Translates to: VFRGVFRRDLLLQAGVSLKTPRS*QCLGVN
Trigger: ATTCACACCCAGACATTGCCAGCTTCGGGGAGTTTT...TAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp AGTGCTAACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCCTTAACATGGCAGGGTTTTCTTaGCCAGCAGGAACTGGCACT +
Preference number: 4 (lower is better)
Translates to: SANRRDSSCSPIMGAALNMAGFS*PAGTGT
Trigger: AGTGCCAGTTCCTGCTGGCCAAGAAAACCCTGCCAT...GTTAAGGGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTTAGCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp GAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATGCCATCAGCAAAGCACTTCCAGAATTTAAAGTaGAAGGCAGCACTCCTAAGC +
Preference number: 4 (lower is better)
Translates to: ESNSLASRSRGRMPSAKHFQNLK*KAALLS
Trigger: GCTTAGGAGTGCTGCCTTTCACTTTAAATTCTGGAA...GTGCTTTGCTGATGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp GCTGTTCCCCCATCATGGGAGCAGCCCTTAACAGAGGGCTGCACAAATCGGCAGTTTCATAGAGTTTTGTaGATGCAGCCAATCCAGTCT +
Preference number: 4 (lower is better)
Translates to: AVPPSWEQPLTEGCTNRQFHRVL*MQPIQS
Trigger: AGACTGGATTGGCTGCATTCACAAAACTCTATGAAA...CTGCCGATTTGTGCAGCCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp CCCTCAGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGGTTGTCATAGTGATAGAGATGAGCTTCTTCTaGGCTTCCTGCATGACTACA +
Preference number: 4 (lower is better)
Translates to: PSALGIHAPASFLVVIVIEMSFF*ASCMTT
Trigger: TGTAGTCATGCAGGAAGCTCAGAAGAAGCTCATCTC...TATCACTATGACAACCAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCTGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp TCAAACGTGTCTGAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATGCCATTATCTCCTTCTCCATaGATGGGAGAGCACAGCAAA +
Preference number: 4 (lower is better)
Translates to: SNVSESNSLASRSRGRMPLSPSP*MGEHSK
Trigger: TTTGCTGTGCTCTCCCATTCATGGAGAAGGAGATAA...TGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTCAGACACGTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp AGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGGTTGTCATAGTGATAGGGTATATGTTGATCTCCCCTaGGGGTTCGGAACGGTTAGA +
Preference number: 4 (lower is better)
Translates to: SVGDSRSSLLLGCHSDRVYVDLP*GFGTVR
Trigger: TCTAACCGTTCCGAACCCTCAGGGGAGATCAACATA...TACCCTATCACTATGACAACCAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp GTTCCTCTTTGCCACAGAGAAAGCACCCAGACGCCACAGGCTCTGTCGCATTTCTTCTCAGCATTGCCATaGCACATCTTTCTCCAGATC +
Preference number: 4 (lower is better)
Translates to: VPLCHRESTQTPQALSHFFSALP*HIFLQI
Trigger: GATCTGGAGAAAGATGTGTCATGGCAATGCTGAGAA...GAAATGCGACAGAGCCTGTGGCGTCTGGGTGCTTTCTCTGTGGCAAAGAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp TGTCTGAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATGCCATCAGCAAGTCTTCCTTCATGCCTaGGACATCACAGTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: CLRVTHWRPGPGVGCHQQVFLHA*DITVFQ
Trigger: TTGAAACACTGTGATGTCTCAGGCATGAAGGAAGAC...TTGCTGATGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp GGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGTGTTCCGTGCCAGTGTaGGATATTACATTGTTTATA +
Preference number: 4 (lower is better)
Translates to: GVFRRDLLLQAGVSLFLACSVPV*DITLFI
Trigger: TATAAACAATGTAATATCTCACACTGGCACGGAACA...CGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp GCTCAGGGACATGGGCCTGGCTTTGGGCAGCAACCTCTGCAATGGCCCTGTTTCTGTTCCGTGCCAGTGTaGGATATTACATTGTTTATA +
Preference number: 4 (lower is better)
Translates to: AQGHGPGFGQQPLQWPCFCSVPV*DITLFI
Trigger: TATAAACAATGTAATATCTCACACTGGCACGGAACA...GAAACAGGGCCATTGCAGAGGTTGCTGCCCAAAGCCAGGCCCATGTCCCTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp AGTGCTAACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCCTTAACCGTCAACAGCTGAACTaGTCACCTCTAGAGACCACT +
Preference number: 4 (lower is better)
Translates to: SANRRDSSCSPIMGAALNRQQLN*SPLETT
Trigger: AGTGGTCTCTAGAGGTGATCAGTTCAGCTGTTGACG...GTTAAGGGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTTAGCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp AACATCACTCAGAAGCCTGTGTTCTTCAAGAGCAGGTGTTCTCAGCCTCACATGGAAGCCAGGACGGACTaGATCAGAAGGAAGATGCGC +
Preference number: 4 (lower is better)
Translates to: NITQKPVFFKSRCSQPHMEARTD*IRRKMR
Trigger: GCGCATCTTCCTTCTGATTCAGTCCGTCCTGGCTTC...CATGTGAGGCTGAGAACACCTGCTCTTGAAGAACACAGGCTTCTGAGTGATGTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp GCTGTTCCCCCATCATGGGAGCAGCCCTTAACAGAGGGCTGCACAAATCGGCAGATCGCTGTTCATCTGTaGAGTGCTCTAGAAGAAATT +
Preference number: 4 (lower is better)
Translates to: AVPPSWEQPLTEGCTNRQIAVHL*SALEEI
Trigger: AATTTCTTCTAGAGCACTTCACAGATGAACAGCGAT...CTGCCGATTTGTGCAGCCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp CTGGGATGCTCTTCTTTGCCAGATCCTCGTGCTGTAAGCACAGCTTACCTAAGGAATTTTCTCTTTGGCTaGCGACGGAGTCCGTGGTGT +
Preference number: 4 (lower is better)
Translates to: LGCSSLPDPRAVSTAYLRNFLFG*RRSPWC
Trigger: ACACCACGGACTCCGTCGTCAGCCAAAGAGAAAATT...CCTTAGGTAAGCTGTGCTTACAGCACGAGGATCTGGCAAAGAAGAGCATCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR TCA 90 bp GAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATGCCATCAGCAAAGCACAAGATGTCATTTCCTTaGCTCCGGCCTTCAATTTTC +
Preference number: 4 (lower is better)
Translates to: ESNSLASRSRGRMPSAKHKMSFP*LRPSIF
Trigger: GAAAATTGAAGGCCGGAGTCAAGGAAATGACATCTT...GTGCTTTGCTGATGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp AACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCCTTAACAGAGGGGATGTAACTGACCCCTaGTCCAAACGTGACATCACT +
Preference number: 4 (lower is better)
Translates to: NRRDSSCSPIMGAALNRGDVTDP*SKRDIT
Trigger: AGTGATGTCACGTTTGGAGCAGGGGTCAGTTACATC...CCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp TGGGCTGGCACAGTTAACATCAGAAAGCAGCTAAAATACTCCTGCAATTGCTCGTGCGTGTCAAAGGGCTaGCTTTCCCGTCAGCACTCG +
Preference number: 4 (lower is better)
Translates to: WAGTVNIRKQLKYSCNCSCVSKG*LSRQHS
Trigger: CGAGTGCTGACGGGAAAGGCAGCCCTTTGACACGCA...CGAGCAATTGCAGGAGTATTTTAGCTGCTTTCTGATGTTAACTGTGCCAGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526422.2
CDS-3UTR GCA 90 bp TGGCATTTCGAATTTGAGAAAGGTCCCGGGCAGAAAAACAAATATTCTCATCTTAGCGGACACCAGGGCTaGAGGCCGCTACCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: WHFEFEKGPGQKNKYSHLSGHQG*RPLPRP
Trigger: GGGCCTTGGTAGCGGCCTGCAGCCCTGGTGTCCGCT...AAGATGAGAATATTTGTTTTTCTGCCCGGGACCTTTCTCAAATTCGAAATGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533155.5
CDS-3UTR GCA 90 bp CCACCTGTGTTGCGGTTCCCACTTGGGATGGCAGTGGGCAGATCTCAGTGGCATTTCTGGTATGTATTTTaGTTGGTTAAGAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: PPVLRFPLGMAVGRSQWHFWYVF*LVKSSG
Trigger: GCCAGAGCTCTTAACCAAGCAAAATACATACCAGAA...ATGCCACTGAGATCTGCCCACTGCCATCCCAAGTGGGAACCGCAACACAGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp TGTCTGAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATGCCATCAGCAACTGCATGACTACATTTaGCAAGGCCATGTCATCTTC +
Preference number: 4 (lower is better)
Translates to: CLRVTHWRPGPGVGCHQQLHDYI*QGHVIF
Trigger: GAAGATGACATGGCCTTGGCAAATGTAGTCATGCAG...TTGCTGATGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp AGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTCTTGATTGGCTACACTaGCTGGTACTTCTAGTAGCA +
Preference number: 4 (lower is better)
Translates to: RRCLVGCFQRGLSEGPPALDWLH*LVLLVA
Trigger: TGCTACTAGAAGTACCAGGCAGTGTAGCCAATCAAG...AGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp CCCTCAGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGGTTGTCATAGTGATATTGGCACAGATGTGCTaGAGTAAGATACGGACGACT +
Preference number: 4 (lower is better)
Translates to: PSALGIHAPASFLVVIVILAQMC*SKIRTT
Trigger: AGTCGTCCGTATCTTACTGCAGCACATCTGTGCCAA...TATCACTATGACAACCAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCTGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp GTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTAGTGCCGAATGTTCCGTaGCAGTGTGAGATATTACAT +
Preference number: 4 (lower is better)
Translates to: VFRGVFRRDLLLQAGVSLVPNVP*QCEILH
Trigger: ATGTAATATCTCACACTGGCACGGAACATTCGGCAC...TAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp ACGGCTTTCTTGACAGAATTCAGGATTGCAATGGTGCTCAGGGACATGGGCCTGCTCTGCTGGTGTCTCTaGAGATGCTCTACAAAGCCT +
Preference number: 4 (lower is better)
Translates to: TAFLTEFRIAMVLRDMGLLCWCL*RCSTKP
Trigger: AGGCTTTGTAGAGCATCTGCAGAGACACCAGCAGAG...CAGGCCCATGTCCCTGAGCACCATTGCAATCCTGAATTCTGTCAAGAAAGCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp GTTCCTCTTTGCCACAGAGAAAGCACCCAGACGCCACAGGCTCTGTCGCATTTCTGGGCACAGATGAACTaGCCTTCAAGACAATCATCT +
Preference number: 4 (lower is better)
Translates to: VPLCHRESTQTPQALSHFWAQMN*PSRQSS
Trigger: AGATGATTGTCTTGAAGGGCAGTTCATCTGTGCCCA...GAAATGCGACAGAGCCTGTGGCGTCTGGGTGCTTTCTCTGTGGCAAAGAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp AACATCACTCAGAAGCCTGTGTTCTTCAAGAGCAGGTGTTCTCAGCCTCACATGCTCCCTGGTGTCTGCTaGATGGCATCCTGGATGCTT +
Preference number: 4 (lower is better)
Translates to: NITQKPVFFKSRCSQPHMLPGVC*MASWML
Trigger: AAGCATCCAGGATGCCATGCAGCAGACACCAGGGAG...CATGTGAGGCTGAGAACACCTGCTCTTGAAGAACACAGGCTTCTGAGTGATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp TGGGCTGGCACAGTTAACATCAGAAAGCAGCTAAAATACTCCTGCAATTGCTCGGCACGCTCAGAGAACTaGGCGGGCCGAAAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: WAGTVNIRKQLKYSCNCSARSEN*AGRKVE
Trigger: TTCCACTTTTCGGCCCGCCCAGTTCTCTGAGCGTGC...CGAGCAATTGCAGGAGTATTTTAGCTGCTTTCTGATGTTAACTGTGCCAGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526422.2
CDS-3UTR CCA 90 bp GCTGTTCCCCCATCATGGGAGCAGCCCTTAACAGAGGGCTGCACAAATCGGCAGGGTATGTATTTTGCTTaGTTAAGAGCTCTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: AVPPSWEQPLTEGCTNRQGMYFA*LRALAC
Trigger: ACAAGCCAGAGCTCTTAACCAAGCAAAATACATACC...CTGCCGATTTGTGCAGCCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp GATGGCCCGCTTGGTCACGTGCTCAATCTCGCCATTCGACTCTTGCTCCAAACTGAGTTCCCGCAAAGCTaGGATCTTATTTTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: DGPLGHVLNLAIRLLLQTEFPQS*DLIFLQ
Trigger: CTGGAGAAAAATAAGATCCCAGCTTTGCGGGAACTC...AGTTTGGAGCAAGAGTCGAATGGCGAGATTGAGCACGTGACCAAGCGGGCCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp AGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTTGGACCAGCTGTTCCTaGTACTTCTTCATGTCATAC +
Preference number: 4 (lower is better)
Translates to: RRCLVGCFQRGLSEGPPAWTSCS*YFFMSY
Trigger: GTATGACATGAAGAAGTACCAGGAACAGCTGGTCCA...AGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp GTTCCTCTTTGCCACAGAGAAAGCACCCAGACGCCACAGGCTCTGTCGCATTTCTGGACCAGCTGTTCCTaGTACTTCTTCATGTCATAC +
Preference number: 4 (lower is better)
Translates to: VPLCHRESTQTPQALSHFWTSCS*YFFMSY
Trigger: GTATGACATGAAGAAGTACCAGGAACAGCTGGTCCA...GAAATGCGACAGAGCCTGTGGCGTCTGGGTGCTTTCTCTGTGGCAAAGAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp AAACGTGACATCACTGATGCTCTTCTCGGGGGTGCTGATGGCCCGCTTGGTCACTTCAAGTTAGATTCCTaGGGCCAGCTCTTCTTTAGA +
Preference number: 4 (lower is better)
Translates to: KRDITDALLGGADGPLGHFKLDS*GQLFFR
Trigger: TCTAAAGAAGAGCTGGCCCCAGGAATCTAACTTGAA...GTGACCAAGCGGGCCATCAGCACCCCCGAGAAGAGCATCAGTGATGTCACGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp GATGGCCCGCTTGGTCACGTGCTCAATCTCGCCATTCGACTCTTGCTCCAAACTCTCCTTCTCCATGAATaGGAGAGCACAGCAAATACA +
Preference number: 4 (lower is better)
Translates to: DGPLGHVLNLAIRLLLQTLLLHE*ESTANT
Trigger: TGTATTTGCTGTGCTCTCCCATTCATGGAGAAGGAG...AGTTTGGAGCAAGAGTCGAATGGCGAGATTGAGCACGTGACCAAGCGGGCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp AGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGGTTGTCATAGTGATAGGGTACTACAGTTGATGACTTaGGAGGTAACAGCAAGGGGG +
Preference number: 4 (lower is better)
Translates to: SVGDSRSSLLLGCHSDRVLQLMT*EVTARG
Trigger: CCCCCTTGCTGTTACCTCCCAAGTCATCAACTGTAG...TACCCTATCACTATGACAACCAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp GGGAGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTATTTATCTACCACCTTaGCACAGATGTGCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: GRRCLVGCFQRGLSEGPPIYLPP*HRCAAV
Trigger: TACTGCAGCACATCTGTGCCAAGGTGGTAGATAAAT...AGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp ACTGGTGTCTTCCATGTAGCGTCCCAGCTTTGGGCTCCTGTAACAGACCTCTTTCCCGGTGTGGGATCTTaGAACTTCGGGAGTATTTGT +
Preference number: 4 (lower is better)
Translates to: TGVFHVASQLWAPVTDLFPGVGS*NFGSIC
Trigger: ACAAATACTCCCGAAGTTCCAAGATCCCACACCGGG...AAAGAGGTCTGTTACAGGAGCCCAAAGCTGGGACGCTACATGGAAGACACCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp AGGTCCAGGGGTAGGATGCCATCAGCAAAGCACGCCAAAATACTAAGGCAGATTTATCGGCTCAGTTCCTaGCTTTCGGTGGTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: RSRGRMPSAKHAKILRQIYRLSS*LSVVRR
Trigger: TCTCCTCACCACCGAAAGCCAGGAACTGAGCCGATA...AATCTGCCTTAGTATTTTGGCGTGCTTTGCTGATGGCATCCTACCCCTGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp ATTGGTAAGCAAGATGAGTGTCTGCTTCCGGATGAATGGGTCGGAATCCTTCAGAGGAGCCAGCAATCTTaGAGAGCAGCATCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: IGKQDECLLPDEWVGILQRSQQS*RAASRQ
Trigger: CTGCCTGGATGCTGCTCTCCAAGATTGCTGGCTCCT...CTGAAGGATTCCGACCCATTCATCCGGAAGCAGACACTCATCTTGCTTACCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR CCA 90 bp TGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATTCCACTGCTGAGGACACATGGAGATGTTaGGAATATACTTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: CRLECLYSWRETAHSTAEDTWRC*EYTCPP
Trigger: TGGTGGACAAGTATATTCCCAACATCTCCATGTGTC...CTCAGCAGTGGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp CACTGTTCCTCTTTGCCACAGAGAAAGCACCCAGACGCCACAGGCTCTGTCGCAGACACATGGAGATGTTaGGAATATACTTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: HCSSLPQRKHPDATGSVADTWRC*EYTCPP
Trigger: TGGTGGACAAGTATATTCCCAACATCTCCATGTGTC...TGCGACAGAGCCTGTGGCGTCTGGGTGCTTTCTCTGTGGCAAAGAGGAACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp TGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTTCTCTCTCTCTGACTaGGGGAACTTGTTGTACTTC +
Preference number: 4 (lower is better)
Translates to: CLVGCFQRGLSEGPPAAGFSLSD*GNLLYF
Trigger: GAAGTACAACAAGTTCCCCCAGTCAGAGAGAGAGAA...GCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR CCA 90 bp AGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGGTTGTCATAGTGATAGGGTAAATTCAGGATTGCAATaGTGCTCAGGGACATGGGCC +
Preference number: 4 (lower is better)
Translates to: SVGDSRSSLLLGCHSDRVNSGLQ*CSGTWA
Trigger: GGCCCATGTCCCTGAGCACCATTGCAATCCTGAATT...TACCCTATCACTATGACAACCAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp AGGTCCAGGGGTAGGATGCCATCAGCAAAGCACGCCAAAATACTAAGGCAGATTGAGTGTCTTTATTCCTaGCGGGAGACCGCACATTCC +
Preference number: 4 (lower is better)
Translates to: RSRGRMPSAKHAKILRQIECLYS*RETAHS
Trigger: GGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTC...AATCTGCCTTAGTATTTTGGCGTGCTTTGCTGATGGCATCCTACCCCTGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp TCGTGTTCCACAGCAAAGCGCTGCCCAAGGACTGCGGGAAGTGATCCAGCTGCCTATTTGCTCTTACGTTaGGTTTGTCTCTTCTTCCTA +
Preference number: 4 (lower is better)
Translates to: SCSTAKRCPRTAGSDPAAYLLLR*VCLFFL
Trigger: TAGGAAGAAGAGACAAACCCAACGTAAGAGCAAATA...GGCAGCTGGATCACTTCCCGCAGTCCTTGGGCAGCGCTTTGCTGTGGAACACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CAA 72 bp CAGGGACACTGGTGTCTTCCATGTAGCGTCCCAGCTTaGGGCTCCTGTAACAGACCTCTTTTTGGTTATGGA +
Preference number: 4 (lower is better)
Translates to: QGHWCLPCSVPA*GSCNRPLFGYG
Trigger: TCCATAACCAAAAAGAGGTCTGTTACAGGAGCCCAAAGCTGGGACGCTACATGGAAGACACCAGTGTCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp AATACTCCTGCAATTGCTCGAGGCTATGATGAAGGCAGCAGCATCAGGAATGGAGAAGCAGAAATGCCATaGCTCCTGGGTTGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: NTPAIARGYDEGSSIRNGEAEMP*LLGWWL
Trigger: AAGCCACCAACCCAGGAGTCATGGCATTTCTGCTTC...TCCATTCCTGATGCTGCTGCCTTCATCATAGCCTCGAGCAATTGCAGGAGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526422.2
CDS-3UTR TCA 90 bp GCTTTCTTGACAGAATTCAGGATTGCAATGGTGCTCAGGGACATGGGCCTGGCTAAGCTTGATCTCCTTTaGGCTGAGGACCTCAAACGT +
Preference number: 4 (lower is better)
Translates to: AFLTEFRIAMVLRDMGLAKLDLL*AEDLKR
Trigger: ACGTTTGAGGTCCTCAGCTCAAAGGAGATCAAGCTT...AGCCAGGCCCATGTCCCTGAGCACCATTGCAATCCTGAATTCTGTCAAGAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp AGTGCTAACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCCTTAACCCTCTTCTGAACTTGTaGGATGAGCTTCTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: SANRRDSSCSPIMGAALNPLLNL*DELLLS
Trigger: GCTCAGAAGAAGCTCATCTCACAAGTTCAGAAGAGG...GTTAAGGGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTTAGCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp GAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATGCCATCAGCAAAGCACATGAAATTCCTCTTCTaGACTTGTGAGATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: ESNSLASRSRGRMPSAKHMKFLF*TCEMSF
Trigger: GAAGCTCATCTCACAAGTTCAGAAGAGGAATTTCAT...GTGCTTTGCTGATGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp AAGGGCTCCTGCCTGCCTGGACACTGGTGGGAGGCGCTGTTTAGTTGGCTGTTTAAACATTGTTCTCAATaGAGAAGGTCCAGATACTCT +
Preference number: 4 (lower is better)
Translates to: KGSCLPGHWWEALFSWLFKHCSQ*RRSRYS
Trigger: AGAGTATCTGGACCTTCTTCATTGAGAACAATGTTT...AAACAGCCAACTAAACAGCGCCTCCCACCAGTGTCCAGGCAGGCAGGAGCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp CTCTTAGGCTGTTCTTTCTTTCTTTTCCGATTCAAGTTAGATTCCTGGGGCCAGCTCCCGGGGTTAGCCTaGGAGCTCTTAGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: LLGCSFFLFRFKLDSWGQLPGLA*ELLGCS
Trigger: AGAACAGCCTAAGAGCTCTCAGGCTAACCCCGGGAG...CTGGCCCCAGGAATCTAACTTGAATCGGAAAAGAAAGAAAGAACAGCCTAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533155.5
CDS-3UTR TCA 90 bp AACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCCTTAACAGAGGGTTATCTCCTTCTCCATaGATGGGAGAGCACAGCAAA +
Preference number: 4 (lower is better)
Translates to: NRRDSSCSPIMGAALNRGLSPSP*MGEHSK
Trigger: TTTGCTGTGCTCTCCCATTCATGGAGAAGGAGATAA...CCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp TGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCAGTAAGGTACCAGGGTaGCTCTCTATTACAGAAAAC +
Preference number: 4 (lower is better)
Translates to: CLVGCFQRGLSEGPPAAGSKVPG*LSITEN
Trigger: GTTTTCTGTAATAGAGAGTCACCCTGGTACCTTACT...GCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp TTCCTCATAGGCTCTCATGACAATGTAACCACCGTCCTAATGGCCCTGGGCCAGTTCTCAGCATTGCCATaGCACATCTTTCTCCAGATC +
Preference number: 4 (lower is better)
Translates to: FLIGSHDNVTTVLMALGQFSALP*HIFLQI
Trigger: GATCTGGAGAAAGATGTGTCATGGCAATGCTGAGAA...CTGGCCCAGGGCCATTAGGACGGTGGTTACATTGTCATGAGAGCCTATGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR TCA 90 bp CGAGGCCGATACGAGGCTGTGATTCTGCCTTTGGATGGATGTTGCTGTACACAGGTCTTCCTTCATGCCTaGGACATCACAGTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: RGRYEAVILPLDGCCCTQVFLHA*DITVFQ
Trigger: TTGAAACACTGTGATGTCTCAGGCATGAAGGAAGAC...CTGTGTACAGCAACATCCATCCAAAGGCAGAATCACAGCCTCGTATCGGCCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp TGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATTCCACTGCTGAGATCGCTGTTCATCTGTaGAGTGCTCTAGAAGAAATT +
Preference number: 4 (lower is better)
Translates to: CRLECLYSWRETAHSTAEIAVHL*SALEEI
Trigger: AATTTCTTCTAGAGCACTTCACAGATGAACAGCGAT...CTCAGCAGTGGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR TCA 90 bp TGTCTGAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATGCCATCAGCAAAAGATGTCATTTCCTTaGCTCCGGCCTTCAATTTTC +
Preference number: 4 (lower is better)
Translates to: CLRVTHWRPGPGVGCHQQKMSFP*LRPSIF
Trigger: GAAAATTGAAGGCCGGAGTCAAGGAAATGACATCTT...TTGCTGATGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp CTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGAATAGAGTTTTGTGAATaGAGCCAATCCAGTCTCTAT +
Preference number: 4 (lower is better)
Translates to: LSEGPPAAGWSVFIPGGRIEFCE*SQSSLY
Trigger: ATAGAGACTGGATTGGCTGCATTCACAAAACTCTAT...TCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp GAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATGCCATCAGCAAAGCACTTCTGGTATGTATTTTaGTTGGTTAAGAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: ESNSLASRSRGRMPSAKHFWYVF*LVKSSG
Trigger: GCCAGAGCTCTTAACCAAGCAAAATACATACCAGAA...GTGCTTTGCTGATGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp CTCTTTGACTCCACGGCTTTCTTGACAGAATTCAGGATTGCAATGGTGCTCAGGTGTTTTGCTAGCTCCTaGTCCTGGACCAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LFDSTAFLTEFRIAMVLRCFASS*SWTSCS
Trigger: GGAACAGCTGGTCCAGGAGCAGGAGCTAGCAAAACA...CCTGAGCACCATTGCAATCCTGAATTCTGTCAAGAAAGCCGTGGAGTCAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp GAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGAAAATGATAGAACAATaGCACCAGTGTACTATGGGA +
Preference number: 4 (lower is better)
Translates to: EGSFGGTSCCRLECLYSWKMIEQ*HQCTMG
Trigger: TCCCATAGTACACTGGTGGCATTGTTCTATCATTTT...CCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp AGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTATACTCACTAATACCTaGAGTGCAGACTTCCTAACG +
Preference number: 4 (lower is better)
Translates to: RRCLVGCFQRGLSEGPPAILTNT*SADFLT
Trigger: CGTTAGGAAGTCTGCACTGCAGGTATTAGTGAGTAT...AGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp GATGGCCCGCTTGGTCACGTGCTCAATCTCGCCATTCGACTCTTGCTCCAAACTATACTCACTAATACCTaGAGTGCAGACTTCCTAACG +
Preference number: 4 (lower is better)
Translates to: DGPLGHVLNLAIRLLLQTILTNT*SADFLT
Trigger: CGTTAGGAAGTCTGCACTGCAGGTATTAGTGAGTAT...AGTTTGGAGCAAGAGTCGAATGGCGAGATTGAGCACGTGACCAAGCGGGCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp CCCACTAGTGCTAACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCATACTCACTAATACCTaGAGTGCAGACTTCCTAACG +
Preference number: 4 (lower is better)
Translates to: PTSANRRDSSCSPIMGAAILTNT*SADFLT
Trigger: CGTTAGGAAGTCTGCACTGCAGGTATTAGTGAGTAT...GGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTTAGCACTAGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp TGGTGGGAGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCCTTAGGAAGATGCTTTaGAATATGCCCAATCACACA +
Preference number: 4 (lower is better)
Translates to: WWEALFSWLFSEGSFGGTLRKML*NMPNHT
Trigger: TGTGTGATTGGGCATATTGCAAAGCATCTTCCTAAG...GGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCTCCCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp TGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCGTGCTCTTAGGAAGATaGTTTGCAATATGCCCAATC +
Preference number: 4 (lower is better)
Translates to: CLVGCFQRGLSEGPPAAGVLLGR*FAICPI
Trigger: GATTGGGCATATTGCAAAGCATCTTCCTAAGAGCAC...GCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp CCCACTAGTGCTAACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCGTGCTCTTAGGAAGATaGTTTGCAATATGCCCAATC +
Preference number: 4 (lower is better)
Translates to: PTSANRRDSSCSPIMGAAVLLGR*FAICPI
Trigger: GATTGGGCATATTGCAAAGCATCTTCCTAAGAGCAC...GGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTTAGCACTAGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp CGACTCCGATGCCTGCTCTTTGACTCCACGGCTTTCTTGACAGAATTCAGGATTTCTTTTTCCAACCAGTaGTGCTCCTCTGCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: RLRCLLFDSTAFLTEFRISFSNQ*CSSAGV
Trigger: GACACCAGCAGAGGAGCAGCACTGGTTGGAAAAAGA...AATCCTGAATTCTGTCAAGAAAGCCGTGGAGTCAAAGAGCAGGCATCGGAGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR GCA 90 bp ATGACTACATTTGCCAAGGCCATGTCATCTTCTTCCATAAGGAGGTCTTTGTCTTACATGGCCAGCACTTaGCCTGGGTGTGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: MTTFAKAMSSSSIRRSLSYMAST*PGCAGL
Trigger: CAGCCCTGCACACCCAGGGCAAGTGCTGGCCATGTA...AGACAAAGACCTCCTTATGGAAGAAGATGACATGGCCTTGGCAAATGTAGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp CTCTTTGACTCCACGGCTTTCTTGACAGAATTCAGGATTGCAATGGTGCTCAGGTTGGGCAGCAACCTCTaGAATGGCCCTGTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LFDSTAFLTEFRIAMVLRLGSNL*NGPVSG
Trigger: ACCTGAAACAGGGCCATTGCAGAGGTTGCTGCCCAA...CCTGAGCACCATTGCAATCCTGAATTCTGTCAAGAAAGCCGTGGAGTCAAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp CCCTCAGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGGTTGTCATAGTGATATTTCCCAAGAAGGGATaGTGTTCATGTCTGTTAGGG +
Preference number: 4 (lower is better)
Translates to: PSALGIHAPASFLVVIVIFPKKG*CSCLLG
Trigger: CCCTAACAGACATGAACAGCATCCCTTCTTGGGAAA...TATCACTATGACAACCAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCTGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp GAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATGCCATCAGCAAAGCACGGTATGTATTTTGCTTaGTTAAGAGCTCTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: ESNSLASRSRGRMPSAKHGMYFA*LRALAC
Trigger: ACAAGCCAGAGCTCTTAACCAAGCAAAATACATACC...GTGCTTTGCTGATGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp TGGTGGGAGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCAAGGAGGTCTTTGTCTaGTTTAGATCTCATTGCCAA +
Preference number: 4 (lower is better)
Translates to: WWEALFSWLFSEGSFGGTKEVFV*FRSHCQ
Trigger: TTGGCAATGAGATCTAAACCAGACAAAGACCTCCTT...GGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCTCCCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp AAGCCAGGACGGACTGAATCAGAAGGAAGATGCGCTTCTCCACCCTGGCTGGACTTTGTCAAACATCACTaGGTGGAATACTTGATTGGC +
Preference number: 4 (lower is better)
Translates to: KPGRTESEGRCASPPWLDFVKHH*VEYLIG
Trigger: GCCAATCAAGTATTCCACCCAGTGATGTTTGACAAA...GTCCAGCCAGGGTGGAGAAGCGCATCTTCCTTCTGATTCAGTCCGTCCTGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR CCA 90 bp GGGAGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTTTTGTCAAACATCACTaGGTGGAATACTTGATTGGC +
Preference number: 4 (lower is better)
Translates to: GRRCLVGCFQRGLSEGPPFVKHH*VEYLIG
Trigger: GCCAATCAAGTATTCCACCCAGTGATGTTTGACAAA...AGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp GAGCTTCTTCTGAGCTTCCTGCATGACTACATTTGCCAAGGCCATGTCATCTTCAGTTCAGTAAGAGACTaGAGGGCCTGCTTCCGGACA +
Preference number: 4 (lower is better)
Translates to: ELLLSFLHDYICQGHVIFSSVRD*RACFRT
Trigger: TGTCCGGAAGCAGGCCCTCCAGTCTCTTACTGAACT...GAAGATGACATGGCCTTGGCAAATGTAGTCATGCAGGAAGCTCAGAAGAAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp ATGACTACATTTGCCAAGGCCATGTCATCTTCTTCCATAAGGAGGTCTTTGTCTTGCGCTTCTCCACCCTaGCTGGACACAGCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: MTTFAKAMSSSSIRRSLSCASPP*LDTAGL
Trigger: TAGCCCAGCTGTGTCCAGCCAGGGTGGAGAAGCGCA...AGACAAAGACCTCCTTATGGAAGAAGATGACATGGCCTTGGCAAATGTAGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp ATTGGTAAGCAAGATGAGTGTCTGCTTCCGGATGAATGGGTCGGAATCCTTCAGATGGCAGGGTTTTCTTaGCCAGCAGGAACTGGCACT +
Preference number: 4 (lower is better)
Translates to: IGKQDECLLPDEWVGILQMAGFS*PAGTGT
Trigger: AGTGCCAGTTCCTGCTGGCCAAGAAAACCCTGCCAT...CTGAAGGATTCCGACCCATTCATCCGGAAGCAGACACTCATCTTGCTTACCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR CCA 90 bp CTCCCTGAGATAGTGCATGAGTTCCCGCAAAGCTGGGATCTTATTTTTCTCCAGATGGCAGGGTTTTCTTaGCCAGCAGGAACTGGCACT +
Preference number: 4 (lower is better)
Translates to: LPEIVHEFPQSWDLIFLQMAGFS*PAGTGT
Trigger: AGTGCCAGTTCCTGCTGGCCAAGAAAACCCTGCCAT...CTGGAGAAAAATAAGATCCCAGCTTTGCGGGAACTCATGCACTATCTCAGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp AGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGGTTGTCATAGTGATAGGGTACTTCAATTTTCTCTTTaGCTGACGACGGAGTCCGTG +
Preference number: 4 (lower is better)
Translates to: SVGDSRSSLLLGCHSDRVLQFSL*LTTESV
Trigger: CACGGACTCCGTCGTCAGCCAAAGAGAAAATTGAAG...TACCCTATCACTATGACAACCAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CAA 72 bp AAGACTCGAGGCCGATACGAGGCTGTGATTCTGCCTTaGGATGGATGTTGCTGTACACAGATGCTACAGACT +
Preference number: 4 (lower is better)
Translates to: KTRGRYEAVILP*DGCCCTQMLQT
Trigger: AGTCTGTAGCATCTGTGTACAGCAACATCCATCCAAAGGCAGAATCACAGCCTCGTATCGGCCTCGAGTCTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp CTGGGATGCTCTTCTTTGCCAGATCCTCGTGCTGTAAGCACAGCTTACCTAAGGACTCCACGGCTTTCTTaGCAGAATTCAGGATTGCAA +
Preference number: 4 (lower is better)
Translates to: LGCSSLPDPRAVSTAYLRTPRLS*QNSGLQ
Trigger: TTGCAATCCTGAATTCTGTCAAGAAAGCCGTGGAGT...CCTTAGGTAAGCTGTGCTTACAGCACGAGGATCTGGCAAAGAAGAGCATCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR TCA 90 bp AGGTCCAGGGGTAGGATGCCATCAGCAAAGCACGCCAAAATACTAAGGCAGATTCTGCAAAGAAGTCCTTaGGCTCATCTCGGTAATCCT +
Preference number: 4 (lower is better)
Translates to: RSRGRMPSAKHAKILRQILQRSP*AHLGNP
Trigger: AGGATTACCGAGATGAGCTCAAGGACTTCTTTGCAG...AATCTGCCTTAGTATTTTGGCGTGCTTTGCTGATGGCATCCTACCCCTGGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp TCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATTCCACTAAACATTGTTCTCAATaGAGAAGGTCCAGATACTCT +
Preference number: 4 (lower is better)
Translates to: SCCRLECLYSWRETAHSTKHCSQ*RRSRYS
Trigger: AGAGTATCTGGACCTTCTTCATTGAGAACAATGTTT...AGTGGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp TCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATTCCACTATTACACTGAGCATTTaGTGGAAAACACAACTGATG +
Preference number: 4 (lower is better)
Translates to: SCCRLECLYSWRETAHSTITLSI*WKTQLM
Trigger: CATCAGTTGTGTTTTCCATCAAATGCTCAGTGTAAT...AGTGGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp TGGCGGCCAGTCCAGCCTTTTAAAGAACGTCAGGTGGAGCAGCCAGGTGAAAGGTGTTCCGTGCCAGTGTaGGATATTACATTGTTTATA +
Preference number: 4 (lower is better)
Translates to: WRPVQPFKERQVEQPGERCSVPV*DITLFI
Trigger: TATAAACAATGTAATATCTCACACTGGCACGGAACA...CCTTTCACCTGGCTGCTCCACCTGACGTTCTTTAAAAGGCTGGACTGGCCGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp AAAATGTACTTCACCAACAGGTCTTCGTCCATATTCCCTGTTCCATTCTCCTTGGTAGTCCAGCCTGGGTaGGGAGCCAGCAATCTTGGA +
Preference number: 4 (lower is better)
Translates to: KMYFTNRSSSIFPVPFSLVVQPG*GASNLG
Trigger: TCCAAGATTGCTGGCTCCTCACCCAGGCTGGACTAC...CAAGGAGAATGGAACAGGGAATATGGACGAAGACCTGTTGGTGAAGTACATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR TCA 90 bp CCCTCAGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGGTTGTCATAGTGATAGATTCTGCTGACTGCTaGTTTTCTCCCAAGATTGTA +
Preference number: 4 (lower is better)
Translates to: PSALGIHAPASFLVVIVIDSADC*FSPKIV
Trigger: TACAATCTTGGGAGAAAATCAGCAGTCAGCAGAATC...TATCACTATGACAACCAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCTGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp CATAAGGAGGTCTTTGTCTGGTTTAGATCTCATTGCCAAAAGCTTGATCTCCTTCGCACATTCCACTGCTaGGGCTGTGGGGGCGGTTTA +
Preference number: 4 (lower is better)
Translates to: HKEVFVWFRSHCQKLDLLRTFHC*GCGGGL
Trigger: TAAACCGCCCCCACAGCCTCAGCAGTGGAATGTGCG...AAGGAGATCAAGCTTTTGGCAATGAGATCTAAACCAGACAAAGACCTCCTTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp GGCACAGTTAACATCAGAAAGCAGCTAAAATACTCCTGCAATTGCTCGAGGCTAAGGCGACATTTCGCGTaGGTGTCAAAGGGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: GTVNIRKQLKYSCNCSRLRRHFA*VSKGCL
Trigger: AAGGCAGCCCTTTGACACGCACGCGAAATGTCGCCT...TAGCCTCGAGCAATTGCAGGAGTATTTTAGCTGCTTTCTGATGTTAACTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526422.2
CDS-3UTR GCA 90 bp CGACTCCGATGCCTGCTCTTTGACTCCACGGCTTTCTTGACAGAATTCAGGATTAGTAACTGTCACCTTTaGCCTCGTCAGGCGACATTT +
Preference number: 4 (lower is better)
Translates to: RLRCLLFDSTAFLTEFRISNCHL*PRQATF
Trigger: AAATGTCGCCTGACGAGGGCAAAGGTGACAGTTACT...AATCCTGAATTCTGTCAAGAAAGCCGTGGAGTCAAAGAGCAGGCATCGGAGTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534532.6
CDS-3UTR GCA 90 bp AATTCAGGATTGCAATGGTGCTCAGGGACATGGGCCTGGCTTTGGGCAGCAACCTTCTGGTATGTATTTTaGTTGGTTAAGAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: NSGLQWCSGTWAWLWAATFWYVF*LVKSSG
Trigger: GCCAGAGCTCTTAACCAAGCAAAATACATACCAGAA...GGTTGCTGCCCAAAGCCAGGCCCATGTCCCTGAGCACCATTGCAATCCTGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp AAGCCAGGACGGACTGAATCAGAAGGAAGATGCGCTTCTCCACCCTGGCTGGACTGGTTTAGATCTCATTaGCAAAAGCTTGATCTCCTT +
Preference number: 4 (lower is better)
Translates to: KPGRTESEGRCASPPWLDWFRSH*QKLDLL
Trigger: AAGGAGATCAAGCTTTTGGCAATGAGATCTAAACCA...GTCCAGCCAGGGTGGAGAAGCGCATCTTCCTTCTGATTCAGTCCGTCCTGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR GCA 90 bp AGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGGTTGTCATAGTGATAGGGTACTGCATGACTACATTTaGCAAGGCCATGTCATCTTC +
Preference number: 4 (lower is better)
Translates to: SVGDSRSSLLLGCHSDRVLHDYI*QGHVIF
Trigger: GAAGATGACATGGCCTTGGCAAATGTAGTCATGCAG...TACCCTATCACTATGACAACCAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp CATAAGGAGGTCTTTGTCTGGTTTAGATCTCATTGCCAAAAGCTTGATCTCCTTACACAGGGCAACCTGTaGCACAGGTGCCACCTCAGC +
Preference number: 4 (lower is better)
Translates to: HKEVFVWFRSHCQKLDLLTQGNL*HRCHLS
Trigger: GCTGAGGTGGCACCTGTGGCACAGGTTGCCCTGTGT...AAGGAGATCAAGCTTTTGGCAATGAGATCTAAACCAGACAAAGACCTCCTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp CTTCATTCTTTGTTATTTGCTCTTACGTTGGGTTTGTCTCTTCTTCCTAGCATTGCTCAAGAGCAGTGCTaGGCCTCTCCGCCACCGAGC +
Preference number: 4 (lower is better)
Translates to: LHSLLFALTLGLSLLPSIAQEQC*ASPPPS
Trigger: GCTCGGTGGCGGAGAGGCGCAGCACTGCTCTTGAGC...AATGCTAGGAAGAAGAGACAAACCCAACGTAAGAGCAAATAACAAAGAATGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp TTCATTCTTTGTTATTTGCTCTTACGTTGGGTTTGTCTCTTCTTCCTAGCATTTATGCCAGTCAGCTCCTaGGGTTGCGCCAGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: FILCYLLLRWVCLFFLAFMPVSS*GCARRP
Trigger: GGGGCGCCTGGCGCAACCCCAGGAGCTGACTGGCAT...AAATGCTAGGAAGAAGAGACAAACCCAACGTAAGAGCAAATAACAAAGAATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp AAGTGTGGGGGATGGGCTGGCACAGTTAACATCAGAAAGCAGCTAAAATACTCCAAATGCCATGACTCCTaGGTTGGTGGCTTGGATGGT +
Preference number: 4 (lower is better)
Translates to: KCGGWAGTVNIRKQLKYSKCHDS*VGGLDG
Trigger: ACCATCCAAGCCACCAACCCAGGAGTCATGGCATTT...GGAGTATTTTAGCTGCTTTCTGATGTTAACTGTGCCAGCCCATCCCCCACACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526422.2
CDS-3UTR CCA 90 bp GGCACAGTTAACATCAGAAAGCAGCTAAAATACTCCTGCAATTGCTCGAGGCTACGTTCTGCAAAAGTGTaGGGGATGGGCTGGCACAGT +
Preference number: 4 (lower is better)
Translates to: GTVNIRKQLKYSCNCSRLRSAKV*GMGWHS
Trigger: ACTGTGCCAGCCCATCCCCCACACTTTTGCAGAACG...TAGCCTCGAGCAATTGCAGGAGTATTTTAGCTGCTTTCTGATGTTAACTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526422.2
CDS-3UTR CCA 90 bp AAAAGCTTGATCTCCTTTGAGCTGAGGACCTCAAACGTGTCTGAGAGTAACTCACTGAGAGTAACTCACTaGCGTCCAGGTCCAGGGGTA +
Preference number: 4 (lower is better)
Translates to: KSLISFELRTSNVSESNSLRVTH*RPGPGV
Trigger: TACCCCTGGACCTGGACGCCAGTGAGTTACTCTCAG...TGAGTTACTCTCAGACACGTTTGAGGTCCTCAGCTCAAAGGAGATCAAGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp GTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTAAAGGAGGTCTTTGTCTaGTTTAGATCTCATTGCCAA +
Preference number: 4 (lower is better)
Translates to: VFRGVFRRDLLLQAGVSLKEVFV*FRSHCQ
Trigger: TTGGCAATGAGATCTAAACCAGACAAAGACCTCCTT...TAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp CTGGGATGCTCTTCTTTGCCAGATCCTCGTGCTGTAAGCACAGCTTACCTAAGGGGTGGAATACTTGATTaGCTACACTGCCTGGTACTT +
Preference number: 4 (lower is better)
Translates to: LGCSSLPDPRAVSTAYLRGGILD*LHCLVL
Trigger: AAGTACCAGGCAGTGTAGCCAATCAAGTATTCCACC...CCTTAGGTAAGCTGTGCTTACAGCACGAGGATCTGGCAAAGAAGAGCATCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR CCA 90 bp CCCTCAGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGGTTGTCATAGTGATAATTTATCTACCACCTTaGCACAGATGTGCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: PSALGIHAPASFLVVIVIIYLPP*HRCAAV
Trigger: TACTGCAGCACATCTGTGCCAAGGTGGTAGATAAAT...TATCACTATGACAACCAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCTGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp AGGTCCAGGGGTAGGATGCCATCAGCAAAGCACGCCAAAATACTAAGGCAGATTAGTAAAAACCCGGTGTaGGATCTTGGAACTTCGGGA +
Preference number: 4 (lower is better)
Translates to: RSRGRMPSAKHAKILRQISKNPV*DLGTSG
Trigger: TCCCGAAGTTCCAAGATCCCACACCGGGTTTTTACT...AATCTGCCTTAGTATTTTGGCGTGCTTTGCTGATGGCATCCTACCCCTGGACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp AAAAGCTTGATCTCCTTTGAGCTGAGGACCTCAAACGTGTCTGAGAGTAACTCATCACGGCAGGTGACATaGCAGGGTTTTCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: KSLISFELRTSNVSESNSSRQVT*QGFLGQ
Trigger: CTGGCCAAGAAAACCCTGCCATGTCACCTGCCGTGA...TGAGTTACTCTCAGACACGTTTGAGGTCCTCAGCTCAAAGGAGATCAAGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp GATTGTCTAAGGCCAAAGGCAATTGCGAAATCAAGTCTGTCAAGTACAATAACACTGGGTGTGCAGGGCTaGCTCACGGCAGGTGACATG +
Preference number: 4 (lower is better)
Translates to: DCLRPKAIAKSSLSSTITLGVQG*LTAGDM
Trigger: CATGTCACCTGCCGTGAGCCAGCCCTGCACACCCAG...TGTTATTGTACTTGACAGACTTGATTTCGCAATTGCCTTTGGCCTTAGACAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp AAAAGCTTGATCTCCTTTGAGCTGAGGACCTCAAACGTGTCTGAGAGTAACTCAACATGGGCCTGGCTTTaGGCAGCAACCTCTGCAATG +
Preference number: 4 (lower is better)
Translates to: KSLISFELRTSNVSESNSTWAWL*AATSAM
Trigger: CATTGCAGAGGTTGCTGCCCAAAGCCAGGCCCATGT...TGAGTTACTCTCAGACACGTTTGAGGTCCTCAGCTCAAAGGAGATCAAGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp CTCCCTGAGATAGTGCATGAGTTCCCGCAAAGCTGGGATCTTATTTTTCTCCAGAATTCAGGATTGCAATaGTGCTCAGGGACATGGGCC +
Preference number: 4 (lower is better)
Translates to: LPEIVHEFPQSWDLIFLQNSGLQ*CSGTWA
Trigger: GGCCCATGTCCCTGAGCACCATTGCAATCCTGAATT...CTGGAGAAAAATAAGATCCCAGCTTTGCGGGAACTCATGCACTATCTCAGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp CCCACTAGTGCTAACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCCCAGTTAAGCAATGTTaGAATCAGTTTGCATCTCTT +
Preference number: 4 (lower is better)
Translates to: PTSANRRDSSCSPIMGAAPVKQC*NQFASL
Trigger: AAGAGATGCAAACTGATTTCAACATTGCTTAACTGG...GGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTTAGCACTAGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp AAGTGTGGGGGATGGGCTGGCACAGTTAACATCAGAAAGCAGCTAAAATACTCCCGTAATATCCGAATGTaGAAGGCAGCCCAACGTGTA +
Preference number: 4 (lower is better)
Translates to: KCGGWAGTVNIRKQLKYSRNIRM*KAAQRV
Trigger: TACACGTTGGGCTGCCTTTCACATTCGGATATTACG...GGAGTATTTTAGCTGCTTTCTGATGTTAACTGTGCCAGCCCATCCCCCACACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526422.2
CDS-3UTR TCA 90 bp CTCTTTGACTCCACGGCTTTCTTGACAGAATTCAGGATTGCAATGGTGCTCAGGCCTCTTCTGAACTTGTaGGATGAGCTTCTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: LFDSTAFLTEFRIAMVLRPLLNL*DELLLS
Trigger: GCTCAGAAGAAGCTCATCTCACAAGTTCAGAAGAGG...CCTGAGCACCATTGCAATCCTGAATTCTGTCAAGAAAGCCGTGGAGTCAAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp GTTCCTCTTTGCCACAGAGAAAGCACCCAGACGCCACAGGCTCTGTCGCATTTCAAACATTGTTCTCAATaGAGAAGGTCCAGATACTCT +
Preference number: 4 (lower is better)
Translates to: VPLCHRESTQTPQALSHFKHCSQ*RRSRYS
Trigger: AGAGTATCTGGACCTTCTTCATTGAGAACAATGTTT...GAAATGCGACAGAGCCTGTGGCGTCTGGGTGCTTTCTCTGTGGCAAAGAGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp TGTCTGAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATGCCATCAGCAACTCGATACTGTACACTaGCATTCTTCTTATGAACTA +
Preference number: 4 (lower is better)
Translates to: CLRVTHWRPGPGVGCHQQLDTVH*HSSYEL
Trigger: TAGTTCATAAGAAGAATGTCAGTGTACAGTATCGAG...TTGCTGATGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp AGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTCTCGATACTGTACACTaGCATTCTTCTTATGAACTA +
Preference number: 4 (lower is better)
Translates to: RRCLVGCFQRGLSEGPPALDTVH*HSSYEL
Trigger: TAGTTCATAAGAAGAATGTCAGTGTACAGTATCGAG...AGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp AGTGCTAACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCCTTAACCATTCAGCTTACACTTaGCAGCATCAGTCACTTTGT +
Preference number: 4 (lower is better)
Translates to: SANRRDSSCSPIMGAALNHSAYT*QHQSLC
Trigger: ACAAAGTGACTGATGCTGTCAAGTGTAAGCTGAATG...GTTAAGGGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTTAGCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp CTCCCTGAGATAGTGCATGAGTTCCCGCAAAGCTGGGATCTTATTTTTCTCCAGAATCGATCAGAGTGCTaGCAAATCGGAAGAACAGGG +
Preference number: 4 (lower is better)
Translates to: LPEIVHEFPQSWDLIFLQNRSEC*QIGRTG
Trigger: CCCTGTTCTTCCGATTTGTCAGCACTCTGATCGATT...CTGGAGAAAAATAAGATCCCAGCTTTGCGGGAACTCATGCACTATCTCAGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp ACGGCTTTCTTGACAGAATTCAGGATTGCAATGGTGCTCAGGGACATGGGCCTGAGTCTCTATGATCTCTaGTTCTATGCTGGGATCCAA +
Preference number: 4 (lower is better)
Translates to: TAFLTEFRIAMVLRDMGLSLYDL*FYAGIQ
Trigger: TTGGATCCCAGCATAGAAGCAGAGATCATAGAGACT...CAGGCCCATGTCCCTGAGCACCATTGCAATCCTGAATTCTGTCAAGAAAGCCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp ACTGGTGTCTTCCATGTAGCGTCCCAGCTTTGGGCTCCTGTAACAGACCTCTTTAGTCTCTATGATCTCTaGTTCTATGCTGGGATCCAA +
Preference number: 4 (lower is better)
Translates to: TGVFHVASQLWAPVTDLFSLYDL*FYAGIQ
Trigger: TTGGATCCCAGCATAGAAGCAGAGATCATAGAGACT...AAAGAGGTCTGTTACAGGAGCCCAAAGCTGGGACGCTACATGGAAGACACCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp TGGGCTGGCACAGTTAACATCAGAAAGCAGCTAAAATACTCCTGCAATTGCTCGAAGGGGAAGCAGAAATaGCATGACTCCTGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: WAGTVNIRKQLKYSCNCSKGKQK*HDSWVG
Trigger: ACCAACCCAGGAGTCATGGCATTTCTGCTTCCCCTT...CGAGCAATTGCAGGAGTATTTTAGCTGCTTTCTGATGTTAACTGTGCCAGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526422.2
CDS-3UTR GCA 90 bp GATTGTCTAAGGCCAAAGGCAATTGCGAAATCAAGTCTGTCAAGTACAATAACACTTCCGGACAGACACTaGAGGGTCCCGACACTGGTC +
Preference number: 4 (lower is better)
Translates to: DCLRPKAIAKSSLSSTITLPDRH*RVPTLV
Trigger: GACCAGTGTCGGGACCCTGCAGTGTCTGTCCGGAAG...TGTTATTGTACTTGACAGACTTGATTTCGCAATTGCCTTTGGCCTTAGACAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp CATAAGGAGGTCTTTGTCTGGTTTAGATCTCATTGCCAAAAGCTTGATCTCCTTCAGCATCCAGGCAGGTaGCGAATGTTCCGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: HKEVFVWFRSHCQKLDLLQHPGR*RMFRAS
Trigger: ACTGGCACGGAACATTCGGCACCTGCCTGGATGCTG...AAGGAGATCAAGCTTTTGGCAATGAGATCTAAACCAGACAAAGACCTCCTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp ACGGCTTTCTTGACAGAATTCAGGATTGCAATGGTGCTCAGGGACATGGGCCTGGTGCTCTTAGGAAGATaGTTTGCAATATGCCCAATC +
Preference number: 4 (lower is better)
Translates to: TAFLTEFRIAMVLRDMGLVLLGR*FAICPI
Trigger: GATTGGGCATATTGCAAAGCATCTTCCTAAGAGCAC...CAGGCCCATGTCCCTGAGCACCATTGCAATCCTGAATTCTGTCAAGAAAGCCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp ATTGGTAAGCAAGATGAGTGTCTGCTTCCGGATGAATGGGTCGGAATCCTTCAGTGGTGTCTCTGCAGATaGTCTACAAAGCCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: IGKQDECLLPDEWVGILQWCLCR*STKPLQ
Trigger: TTGCAGAGGCTTTGTAGAGCATCTGCAGAGACACCA...CTGAAGGATTCCGACCCATTCATCCGGAAGCAGACACTCATCTTGCTTACCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR GCA 90 bp AACATCACTCAGAAGCCTGTGTTCTTCAAGAGCAGGTGTTCTCAGCCTCACATGTGGTGTCTCTGCAGATaGTCTACAAAGCCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: NITQKPVFFKSRCSQPHMWCLCR*STKPLQ
Trigger: TTGCAGAGGCTTTGTAGAGCATCTGCAGAGACACCA...CATGTGAGGCTGAGAACACCTGCTCTTGAAGAACACAGGCTTCTGAGTGATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp ATGACTACATTTGCCAAGGCCATGTCATCTTCTTCCATAAGGAGGTCTTTGTCTGCACCAGGGCTGGGATaGTCTTCTTTGCCAGATCCT +
Preference number: 4 (lower is better)
Translates to: MTTFAKAMSSSSIRRSLSAPGLG*SSLPDP
Trigger: AGGATCTGGCAAAGAAGAGCATCCCAGCCCTGGTGC...AGACAAAGACCTCCTTATGGAAGAAGATGACATGGCCTTGGCAAATGTAGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp AAGTCGTTCTGCAAAAGTGTGGGGGATGGGCTGGCACAGTTAACATCAGAAAGCGCCATTAGCAGGCTTTaGGAATCCCATTTTCACTCA +
Preference number: 4 (lower is better)
Translates to: KSFCKSVGDGLAQLTSESAISRL*ESHFHS
Trigger: TGAGTGAAAATGGGATTCCCAAAGCCTGCTAATGGC...GCTTTCTGATGTTAACTGTGCCAGCCCATCCCCCACACTTTTGCAGAACGACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526422.2
CDS-3UTR CCA 90 bp TCGTGCTGTAAGCACAGCTTACCTAAGGTAATGATGGCATGTGCTCTAATCACATATCGGCTCAGTTCCTaGCTTTCGGTGGTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: SCCKHSLPKVMMACALITYRLSS*LSVVRR
Trigger: TCTCCTCACCACCGAAAGCCAGGAACTGAGCCGATA...TGTGATTAGAGCACATGCCATCATTACCTTAGGTAAGCTGTGCTTACAGCACGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR CCA 90 bp TCGTGCTGTAAGCACAGCTTACCTAAGGTAATGATGGCATGTGCTCTAATCACAGATGATACTGCTACATaGCCAGCACTTGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SCCKHSLPKVMMACALITDDTAT*PALALG
Trigger: ACCCAGGGCAAGTGCTGGCCATGTAGCAGTATCATC...TGTGATTAGAGCACATGCCATCATTACCTTAGGTAAGCTGTGCTTACAGCACGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR CCA 90 bp CATAAGGAGGTCTTTGTCTGGTTTAGATCTCATTGCCAAAAGCTTGATCTCCTTTGCCTGCCTGGACACTaGTGGGAGGCGCTGTTTAGT +
Preference number: 4 (lower is better)
Translates to: HKEVFVWFRSHCQKLDLLCLPGH*WEALFS
Trigger: ACTAAACAGCGCCTCCCACCAGTGTCCAGGCAGGCA...AAGGAGATCAAGCTTTTGGCAATGAGATCTAAACCAGACAAAGACCTCCTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp AGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGGTTGTCATAGTGATAGGGTACATGGAAGTTTACTGTaGTGTTCCTTTTCTCACACA +
Preference number: 4 (lower is better)
Translates to: SVGDSRSSLLLGCHSDRVHGSLL*CSFSHT
Trigger: TGTGTGAGAAAAGGAACATCACAGTAAACTTCCATG...TACCCTATCACTATGACAACCAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp AAGTCGTTCTGCAAAAGTGTGGGGGATGGGCTGGCACAGTTAACATCAGAAAGCAAAGGTGTACAGGCTTaGCACATTCAAAGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: KSFCKSVGDGLAQLTSESKGVQA*HIQSCV
Trigger: AACACAGCTTTGAATGTGTCAAGCCTGTACACCTTT...GCTTTCTGATGTTAACTGTGCCAGCCCATCCCCCACACTTTTGCAGAACGACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526422.2
CDS-3UTR TCA 90 bp GGCTGTTCTTTCTTTCTTTTCCGATTCAAGTTAGATTCCTGGGGCCAGCTCTTCATGGCATTTCGAATTTaGGAAAGGTCCCGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: GCSFFLFRFKLDSWGQLFMAFRI*ERSRAE
Trigger: TTCTGCCCGGGACCTTTCTCAAATTCGAAATGCCAT...GAAGAGCTGGCCCCAGGAATCTAACTTGAATCGGAAAAGAAAGAAAGAACAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533155.5
CDS-3UTR TCA 90 bp TCGTGCTGTAAGCACAGCTTACCTAAGGTAATGATGGCATGTGCTCTAATCACATATGTTGATCTCCCCTaGGGGTTCGGAACGGTTAGA +
Preference number: 4 (lower is better)
Translates to: SCCKHSLPKVMMACALITYVDLP*GFGTVR
Trigger: TCTAACCGTTCCGAACCCTCAGGGGAGATCAACATA...TGTGATTAGAGCACATGCCATCATTACCTTAGGTAAGCTGTGCTTACAGCACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR TCA 90 bp CGACTCCGATGCCTGCTCTTTGACTCCACGGCTTTCTTGACAGAATTCAGGATTGATTCTGCTGACTGCTaGTTTTCTCCCAAGATTGTA +
Preference number: 4 (lower is better)
Translates to: RLRCLLFDSTAFLTEFRIDSADC*FSPKIV
Trigger: TACAATCTTGGGAGAAAATCAGCAGTCAGCAGAATC...AATCCTGAATTCTGTCAAGAAAGCCGTGGAGTCAAAGAGCAGGCATCGGAGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp CGACTCCGATGCCTGCTCTTTGACTCCACGGCTTTCTTGACAGAATTCAGGATTCATTCAGCTTACACTTaGCAGCATCAGTCACTTTGT +
Preference number: 4 (lower is better)
Translates to: RLRCLLFDSTAFLTEFRIHSAYT*QHQSLC
Trigger: ACAAAGTGACTGATGCTGTCAAGTGTAAGCTGAATG...AATCCTGAATTCTGTCAAGAAAGCCGTGGAGTCAAAGAGCAGGCATCGGAGTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp ATTGGTAAGCAAGATGAGTGTCTGCTTCCGGATGAATGGGTCGGAATCCTTCAGTATACTTGTCCACCATaGTGGTGTAGCGAATGCAGA +
Preference number: 4 (lower is better)
Translates to: IGKQDECLLPDEWVGILQYTCPP*WCSECR
Trigger: TCTGCATTCGCTACACCATCATGGTGGACAAGTATA...CTGAAGGATTCCGACCCATTCATCCGGAAGCAGACACTCATCTTGCTTACCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR TCA 90 bp CCCTCAGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGGTTGTCATAGTGATAACAGAAAAATCCTATTaGCTACTGGAAGGCTGTATT +
Preference number: 4 (lower is better)
Translates to: PSALGIHAPASFLVVIVITEKSY*LLEGCI
Trigger: AATACAGCCTTCCAGTAGTCAATAGGATTTTTCTGT...TATCACTATGACAACCAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCTGAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp AAAATACTCCTGCAATTGCTCGAGGCTATGATGAAGGCAGCAGCATCAGGAATGAGAAGACAAGACAACTaGAGTTCTGTAGGGACTGCG +
Preference number: 4 (lower is better)
Translates to: KILLQLLEAMMKAAASGMRRQDN*SSVGTA
Trigger: CGCAGTCCCTACAGAACTGCAGTTGTCTTGTCTTCT...CATTCCTGATGCTGCTGCCTTCATCATAGCCTCGAGCAATTGCAGGAGTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526422.2
CDS-3UTR GCA 90 bp AAAATACTCCTGCAATTGCTCGAGGCTATGATGAAGGCAGCAGCATCAGGAATGAGTAACTGTCACCTTTaGCCTCGTCAGGCGACATTT +
Preference number: 4 (lower is better)
Translates to: KILLQLLEAMMKAAASGMSNCHL*PRQATF
Trigger: AAATGTCGCCTGACGAGGGCAAAGGTGACAGTTACT...CATTCCTGATGCTGCTGCCTTCATCATAGCCTCGAGCAATTGCAGGAGTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526422.2
CDS-3UTR GCA 90 bp CTCTTTGACTCCACGGCTTTCTTGACAGAATTCAGGATTGCAATGGTGCTCAGGCAGCTGTTTGTCAACTaGAAAGAAGTCCTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: LFDSTAFLTEFRIAMVLRQLFVN*KEVLEL
Trigger: GAGCTCAAGGACTTCTTTGCAGTTGACAAACAGCTG...CCTGAGCACCATTGCAATCCTGAATTCTGTCAAGAAAGCCGTGGAGTCAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp GATTGTCTAAGGCCAAAGGCAATTGCGAAATCAAGTCTGTCAAGTACAATAACAAGAGACTGGAGGGCCTaGTTCCGGACAGACACTGCA +
Preference number: 4 (lower is better)
Translates to: DCLRPKAIAKSSLSSTITRDWRA*FRTDTA
Trigger: TGCAGTGTCTGTCCGGAAGCAGGCCCTCCAGTCTCT...TGTTATTGTACTTGACAGACTTGATTTCGCAATTGCCTTTGGCCTTAGACAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp ATCAGCAAAGCACGCCAAAATACTAAGGCAGATTTTGGAAGTGATGTTGAATCGCCTTCTCCTGCACAGTaGTCTCGCAGTCCATCACCA +
Preference number: 4 (lower is better)
Translates to: ISKARQNTKADFGSDVESPSPAQ*SRSPSP
Trigger: TGGTGATGGACTGCGAGAGCACTGTGCAGGAGAAGG...CGATTCAACATCACTTCCAAAATCTGCCTTAGTATTTTGGCGTGCTTTGCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp TCGTGCTGTAAGCACAGCTTACCTAAGGTAATGATGGCATGTGCTCTAATCACATTTTCCAACCAGTGCTaGTCCTCTGCTGGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: SCCKHSLPKVMMACALITFSNQC*SSAGVS
Trigger: AGAGACACCAGCAGAGGAGCAGCACTGGTTGGAAAA...TGTGATTAGAGCACATGCCATCATTACCTTAGGTAAGCTGTGCTTACAGCACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR GCA 90 bp ATCAGCAAAGCACGCCAAAATACTAAGGCAGATTTTGGAAGTGATGTTGAATCGCTGGGGCCTCACTGCTaGCTTGAGATGATGGTGAGT +
Preference number: 4 (lower is better)
Translates to: ISKARQNTKADFGSDVESLGPHC*LEMMVS
Trigger: ACTCACCATCATCTCAAGGCAGCAGTGAGGCCCCAG...CGATTCAACATCACTTCCAAAATCTGCCTTAGTATTTTGGCGTGCTTTGCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp CTTCATTCTTTGTTATTTGCTCTTACGTTGGGTTTGTCTCTTCTTCCTAGCATTCTTGGGCCCTGGCAGTaGCTGTGTCCCAGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: LHSLLFALTLGLSLLPSILGPWQ*LCPSEL
Trigger: AAGCTCACTGGGACACAGCCACTGCCAGGGCCCAAG...AATGCTAGGAAGAAGAGACAAACCCAACGTAAGAGCAAATAACAAAGAATGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp CTGGGATGCTCTTCTTTGCCAGATCCTCGTGCTGTAAGCACAGCTTACCTAAGGGGTATGTATTTTGCTTaGTTAAGAGCTCTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: LGCSSLPDPRAVSTAYLRGMYFA*LRALAC
Trigger: ACAAGCCAGAGCTCTTAACCAAGCAAAATACATACC...CCTTAGGTAAGCTGTGCTTACAGCACGAGGATCTGGCAAAGAAGAGCATCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR CCA 90 bp ACTGGTGTCTTCCATGTAGCGTCCCAGCTTTGGGCTCCTGTAACAGACCTCTTTAAGGAGGTCTTTGTCTaGTTTAGATCTCATTGCCAA +
Preference number: 4 (lower is better)
Translates to: TGVFHVASQLWAPVTDLFKEVFV*FRSHCQ
Trigger: TTGGCAATGAGATCTAAACCAGACAAAGACCTCCTT...AAAGAGGTCTGTTACAGGAGCCCAAAGCTGGGACGCTACATGGAAGACACCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp CTCCCTGAGATAGTGCATGAGTTCCCGCAAAGCTGGGATCTTATTTTTCTCCAGTGGACCAGCTGTTCCTaGTACTTCTTCATGTCATAC +
Preference number: 4 (lower is better)
Translates to: LPEIVHEFPQSWDLIFLQWTSCS*YFFMSY
Trigger: GTATGACATGAAGAAGTACCAGGAACAGCTGGTCCA...CTGGAGAAAAATAAGATCCCAGCTTTGCGGGAACTCATGCACTATCTCAGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp AGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGGTTGTCATAGTGATAGGGTATTTGTCAAACATCACTaGGTGGAATACTTGATTGGC +
Preference number: 4 (lower is better)
Translates to: SVGDSRSSLLLGCHSDRVFVKHH*VEYLIG
Trigger: GCCAATCAAGTATTCCACCCAGTGATGTTTGACAAA...TACCCTATCACTATGACAACCAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp TTCATTCTTTGTTATTTGCTCTTACGTTGGGTTTGTCTCTTCTTCCTAGCATTTCCCCACCCTCAGCGTTaGGGATTCACGCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: FILCYLLLRWVCLFFLAFPHPQR*GFTLQP
Trigger: AGGCTGGAGCGTGAATCCCCAACGCTGAGGGTGGGG...AAATGCTAGGAAGAAGAGACAAACCCAACGTAAGAGCAAATAACAAAGAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp CTCCCTGAGATAGTGCATGAGTTCCCGCAAAGCTGGGATCTTATTTTTCTCCAGAATCTAAAGGGTATCTaGGATAGGGTACTTCCGGTA +
Preference number: 4 (lower is better)
Translates to: LPEIVHEFPQSWDLIFLQNLKGI*DRVLPV
Trigger: TACCGGAAGTACCCTATCTCAGATACCCTTTAGATT...CTGGAGAAAAATAAGATCCCAGCTTTGCGGGAACTCATGCACTATCTCAGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534532.6
CDS-3UTR TCA 90 bp AGGTCCAGGGGTAGGATGCCATCAGCAAAGCACGCCAAAATACTAAGGCAGATTATGAAATTCCTCTTCTaGACTTGTGAGATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: RSRGRMPSAKHAKILRQIMKFLF*TCEMSF
Trigger: GAAGCTCATCTCACAAGTTCAGAAGAGGAATTTCAT...AATCTGCCTTAGTATTTTGGCGTGCTTTGCTGATGGCATCCTACCCCTGGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp AGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGGTTGTCATAGTGATAGGGTAATTACACTGAGCATTTaGTGGAAAACACAACTGATG +
Preference number: 4 (lower is better)
Translates to: SVGDSRSSLLLGCHSDRVITLSI*WKTQLM
Trigger: CATCAGTTGTGTTTTCCATCAAATGCTCAGTGTAAT...TACCCTATCACTATGACAACCAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp ATCAGCAAAGCACGCCAAAATACTAAGGCAGATTTTGGAAGTGATGTTGAATCGGTGTCTGCTTCCGGATaGATGGGTCGGAATCCTTCA +
Preference number: 4 (lower is better)
Translates to: ISKARQNTKADFGSDVESVSASG*MGRNPS
Trigger: TGAAGGATTCCGACCCATTCATCCGGAAGCAGACAC...CGATTCAACATCACTTCCAAAATCTGCCTTAGTATTTTGGCGTGCTTTGCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp CATAAGGAGGTCTTTGTCTGGTTTAGATCTCATTGCCAAAAGCTTGATCTCCTTGGCAATGTCTGGGTGTaGATCGATCAGAGTGCTGAC +
Preference number: 4 (lower is better)
Translates to: HKEVFVWFRSHCQKLDLLGNVWV*IDQSAD
Trigger: GTCAGCACTCTGATCGATTCACACCCAGACATTGCC...AAGGAGATCAAGCTTTTGGCAATGAGATCTAAACCAGACAAAGACCTCCTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp CTGTTCTTTCTTTCTTTTCCGATTCAAGTTAGATTCCTGGGGCCAGCTCTTCTTACTGGGTGGAATACTTaGTTGGCTACACTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LFFLSFPIQVRFLGPALLTGWNT*LATLPP
Trigger: TGGAGGCAGTGTAGCCAATCAAGTATTCCACCCAGT...AAGAAGAGCTGGCCCCAGGAATCTAACTTGAATCGGAAAAGAAAGAAAGAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533155.5
CDS-3UTR GCA 90 bp AGTGCTAACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCCTTAACAAAATGATAGAACAATaGCACCAGTGTACTATGGGA +
Preference number: 4 (lower is better)
Translates to: SANRRDSSCSPIMGAALNKMIEQ*HQCTMG
Trigger: TCCCATAGTACACTGGTGGCATTGTTCTATCATTTT...GTTAAGGGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTTAGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp ATGACTACATTTGCCAAGGCCATGTCATCTTCTTCCATAAGGAGGTCTTTGTCTCAACTCCAGACAGTGTaGAAAGCTGGACAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: MTTFAKAMSSSSIRRSLSQLQTV*KAGQCL
Trigger: AAGGCACTGTCCAGCTTTGCACACTGTCTGGAGTTG...AGACAAAGACCTCCTTATGGAAGAAGATGACATGGCCTTGGCAAATGTAGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp CTGGGATGCTCTTCTTTGCCAGATCCTCGTGCTGTAAGCACAGCTTACCTAAGGAGATGCTTTGCAATATaGCCAATCACACAGAGAATA +
Preference number: 4 (lower is better)
Translates to: LGCSSLPDPRAVSTAYLRRCFAI*PITQRI
Trigger: TATTCTCTGTGTGATTGGGCATATTGCAAAGCATCT...CCTTAGGTAAGCTGTGCTTACAGCACGAGGATCTGGCAAAGAAGAGCATCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR GCA 90 bp GATTGTCTAAGGCCAAAGGCAATTGCGAAATCAAGTCTGTCAAGTACAATAACAATGTTGGAGAGGCGGTaGTCGCAGGTGGAGAGTACA +
Preference number: 4 (lower is better)
Translates to: DCLRPKAIAKSSLSSTITMLERR*SQVEST
Trigger: TGTACTCTCCACCTGCGAGCACCGCCTCTCCAACAT...TGTTATTGTACTTGACAGACTTGATTTCGCAATTGCCTTTGGCCTTAGACAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp TTCATTCTTTGTTATTTGCTCTTACGTTGGGTTTGTCTCTTCTTCCTAGCATTTACACAGGGCAACCTGTaGCACAGGTGCCACCTCAGC +
Preference number: 4 (lower is better)
Translates to: FILCYLLLRWVCLFFLAFTQGNL*HRCHLS
Trigger: GCTGAGGTGGCACCTGTGGCACAGGTTGCCCTGTGT...AAATGCTAGGAAGAAGAGACAAACCCAACGTAAGAGCAAATAACAAAGAATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp GATTGTCTAAGGCCAAAGGCAATTGCGAAATCAAGTCTGTCAAGTACAATAACAGGAGGGACCTCCTGCTaGAGGCTGGAGTGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: DCLRPKAIAKSSLSSTITGGTSC*RLECLY
Trigger: ATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCC...TGTTATTGTACTTGACAGACTTGATTTCGCAATTGCCTTTGGCCTTAGACAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp GAGCTTCTTCTGAGCTTCCTGCATGACTACATTTGCCAAGGCCATGTCATCTTCTTCAAGTTAGATTCCTaGGGCCAGCTCTTCTTTAGA +
Preference number: 4 (lower is better)
Translates to: ELLLSFLHDYICQGHVIFFKLDS*GQLFFR
Trigger: TCTAAAGAAGAGCTGGCCCCAGGAATCTAACTTGAA...GAAGATGACATGGCCTTGGCAAATGTAGTCATGCAGGAAGCTCAGAAGAAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp GATTGTCTAAGGCCAAAGGCAATTGCGAAATCAAGTCTGTCAAGTACAATAACATCACGGCAGGTGACATaGCAGGGTTTTCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: DCLRPKAIAKSSLSSTITSRQVT*QGFLGQ
Trigger: CTGGCCAAGAAAACCCTGCCATGTCACCTGCCGTGA...TGTTATTGTACTTGACAGACTTGATTTCGCAATTGCCTTTGGCCTTAGACAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp GCAGTGATAAACATAAGATGTCATTTCCTTGACTCCGGCCTTCAATTTTCTCTTACATGGGCCTGGCTTTaGGCAGCAACCTCTGCAATG +
Preference number: 4 (lower is better)
Translates to: AVINIRCHFLDSGLQFSLTWAWL*AATSAM
Trigger: CATTGCAGAGGTTGCTGCCCAAAGCCAGGCCCATGT...AAGAGAAAATTGAAGGCCGGAGTCAAGGAAATGACATCTTATGTTTATCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp AAAAGCTTGATCTCCTTTGAGCTGAGGACCTCAAACGTGTCTGAGAGTAACTCACTTCAATTTTCTCTTTaGCTGACGACGGAGTCCGTG +
Preference number: 4 (lower is better)
Translates to: KSLISFELRTSNVSESNSLQFSL*LTTESV
Trigger: CACGGACTCCGTCGTCAGCCAAAGAGAAAATTGAAG...TGAGTTACTCTCAGACACGTTTGAGGTCCTCAGCTCAAAGGAGATCAAGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp TTCATTCTTTGTTATTTGCTCTTACGTTGGGTTTGTCTCTTCTTCCTAGCATTTCCACTGCTGAGGCTGTaGGGGCGGTTTATCAGGCAG +
Preference number: 4 (lower is better)
Translates to: FILCYLLLRWVCLFFLAFPLLRL*GRFIRQ
Trigger: CTGCCTGATAAACCGCCCCCACAGCCTCAGCAGTGG...AAATGCTAGGAAGAAGAGACAAACCCAACGTAAGAGCAAATAACAAAGAATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp CCCTCAGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGGTTGTCATAGTGATAAATCCTATTGACTACTaGAAGGCTGTATTTATGCTA +
Preference number: 4 (lower is better)
Translates to: PSALGIHAPASFLVVIVINPIDY*KAVFML
Trigger: TAGCATAAATACAGCCTTCCAGTAGTCAATAGGATT...TATCACTATGACAACCAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCTGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CAA 72 bp TTCTTCATGTCATACTCAAGCTCTGATGCCAGCTGTTaGTCAACTGCAAAGAAGTCCTTGAGCTCATCTCGG +
Preference number: 4 (lower is better)
Translates to: FFMSYSSSDASC*STAKKSLSSSR
Trigger: CCGAGATGAGCTCAAGGACTTCTTTGCAGTTGACAAACAGCTGGCATCAGAGCTTGAGTATGACATGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp AAAATACTCCTGCAATTGCTCGAGGCTATGATGAAGGCAGCAGCATCAGGAATGAATCTAAAGGGTATCTaGGATAGGGTACTTCCGGTA +
Preference number: 4 (lower is better)
Translates to: KILLQLLEAMMKAAASGMNLKGI*DRVLPV
Trigger: TACCGGAAGTACCCTATCTCAGATACCCTTTAGATT...CATTCCTGATGCTGCTGCCTTCATCATAGCCTCGAGCAATTGCAGGAGTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526422.2
CDS-3UTR TCA 90 bp AAAATACTCCTGCAATTGCTCGAGGCTATGATGAAGGCAGCAGCATCAGGAATGCCATTTTCACTCATGTaGCGTTTGATGATGTCTGCA +
Preference number: 4 (lower is better)
Translates to: KILLQLLEAMMKAAASGMPFSLM*RLMMSA
Trigger: TGCAGACATCATCAAACGTCACATGAGTGAAAATGG...CATTCCTGATGCTGCTGCCTTCATCATAGCCTCGAGCAATTGCAGGAGTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526422.2
CDS-3UTR TCA 90 bp ATGACTACATTTGCCAAGGCCATGTCATCTTCTTCCATAAGGAGGTCTTTGTCTGAGATGAGCTTCTTCTaGGCTTCCTGCATGACTACA +
Preference number: 4 (lower is better)
Translates to: MTTFAKAMSSSSIRRSLSEMSFF*ASCMTT
Trigger: TGTAGTCATGCAGGAAGCTCAGAAGAAGCTCATCTC...AGACAAAGACCTCCTTATGGAAGAAGATGACATGGCCTTGGCAAATGTAGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp CATAAGGAGGTCTTTGTCTGGTTTAGATCTCATTGCCAAAAGCTTGATCTCCTTACTGGGTGGAATACTTaGTTGGCTACACTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: HKEVFVWFRSHCQKLDLLTGWNT*LATLPG
Trigger: ACCAGGCAGTGTAGCCAATCAAGTATTCCACCCAGT...AAGGAGATCAAGCTTTTGGCAATGAGATCTAAACCAGACAAAGACCTCCTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp CAAAATACTAAGGCAGATTTTGGAAGTGATGTTGAATCGCTGTTCATCTGTGAATCCGACTCCGATGCCTaGTCTTTGACTCCACGGCTT +
Preference number: 4 (lower is better)
Translates to: QNTKADFGSDVESLFICESDSDA*SLTPRL
Trigger: AAGCCGTGGAGTCAAAGAGCAGGCATCGGAGTCGGA...TTCACAGATGAACAGCGATTCAACATCACTTCCAAAATCTGCCTTAGTATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR GCA 90 bp ATCAGCAAAGCACGCCAAAATACTAAGGCAGATTTTGGAAGTGATGTTGAATCGGCTCTACAAAGCCTCTaGAAGGCGTCAACAGCTGAA +
Preference number: 4 (lower is better)
Translates to: ISKARQNTKADFGSDVESALQSL*KASTAE
Trigger: TTCAGCTGTTGACGCCTTGCAGAGGCTTTGTAGAGC...CGATTCAACATCACTTCCAAAATCTGCCTTAGTATTTTGGCGTGCTTTGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp GCAGTGATAAACATAAGATGTCATTTCCTTGACTCCGGCCTTCAATTTTCTCTTAGGGCGCTGATAAACTaGACCGCCTGGTTTCTACAG +
Preference number: 4 (lower is better)
Translates to: AVINIRCHFLDSGLQFSLRALIN*TAWFLQ
Trigger: CTGTAGAAACCAGGCGGTCCAGTTTATCAGCGCCCT...AAGAGAAAATTGAAGGCCGGAGTCAAGGAAATGACATCTTATGTTTATCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp CTTCATTCTTTGTTATTTGCTCTTACGTTGGGTTTGTCTCTTCTTCCTAGCATTGTAGCGTCCCAGCTTTaGGCTCCTGTAACAGACCTC +
Preference number: 4 (lower is better)
Translates to: LHSLLFALTLGLSLLPSIVASQL*APVTDL
Trigger: GAGGTCTGTTACAGGAGCCCAAAGCTGGGACGCTAC...AATGCTAGGAAGAAGAGACAAACCCAACGTAAGAGCAAATAACAAAGAATGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CAA 72 bp GCCAAGGCCATGTCATCTTCTTCCATAAGGAGGTCTTaGTCTGGTTTAGATCTCATTGCCAAAAGCTTGATC +
Preference number: 4 (lower is better)
Translates to: AKAMSSSSIRRS*SGLDLIAKSLI
Trigger: GATCAAGCTTTTGGCAATGAGATCTAAACCAGACAAAGACCTCCTTATGGAAGAAGATGACATGGCCTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp TGTTCTTTCTTTCTTTTCCGATTCAAGTTAGATTCCTGGGGCCAGCTCTTCTTTCCAATCCAGTCTCTATaGTCTCTGCTTCTATGCTGG +
Preference number: 4 (lower is better)
Translates to: CSFFLFRFKLDSWGQLFFPIQSL*SLLLCW
Trigger: CCAGCATAGAAGCAGAGATCATAGAGACTGGATTGG...AAAGAAGAGCTGGCCCCAGGAATCTAACTTGAATCGGAAAAGAAAGAAAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533155.5
CDS-3UTR TCA 90 bp ATTGGTAAGCAAGATGAGTGTCTGCTTCCGGATGAATGGGTCGGAATCCTTCAGATTACACTGAGCATTTaGTGGAAAACACAACTGATG +
Preference number: 4 (lower is better)
Translates to: IGKQDECLLPDEWVGILQITLSI*WKTQLM
Trigger: CATCAGTTGTGTTTTCCATCAAATGCTCAGTGTAAT...CTGAAGGATTCCGACCCATTCATCCGGAAGCAGACACTCATCTTGCTTACCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR TCA 90 bp CAAAATACTAAGGCAGATTTTGGAAGTGATGTTGAATCGCTGTTCATCTGTGAACCGCTTCTCTCTCTCTaGCTGGGGGAACTTGTTGTA +
Preference number: 4 (lower is better)
Translates to: QNTKADFGSDVESLFICEPLLSL*LGELVV
Trigger: TACAACAAGTTCCCCCAGTCAGAGAGAGAGAAGCGG...TTCACAGATGAACAGCGATTCAACATCACTTCCAAAATCTGCCTTAGTATTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR TCA 90 bp CTTCATTCTTTGTTATTTGCTCTTACGTTGGGTTTGTCTCTTCTTCCTAGCATTCTGCCTGGGCACAGATaGACTGCCCTTCAAGACAAT +
Preference number: 4 (lower is better)
Translates to: LHSLLFALTLGLSLLPSILPGHR*TALQDN
Trigger: ATTGTCTTGAAGGGCAGTTCATCTGTGCCCAGGCAG...AATGCTAGGAAGAAGAGACAAACCCAACGTAAGAGCAAATAACAAAGAATGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp AAAATGTACTTCACCAACAGGTCTTCGTCCATATTCCCTGTTCCATTCTCCTTGTCGCCATTCGACTCTTaGTCCAAACTGTATGAAGAC +
Preference number: 4 (lower is better)
Translates to: KMYFTNRSSSIFPVPFSLSPFDS*SKLYED
Trigger: GTCTTCATACAGTTTGGAGCAAGAGTCGAATGGCGA...CAAGGAGAATGGAACAGGGAATATGGACGAAGACCTGTTGGTGAAGTACATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR GCA 90 bp GAGCTTCTTCTGAGCTTCCTGCATGACTACATTTGCCAAGGCCATGTCATCTTCTGGTTTAGATCTCATTaGCAAAAGCTTGATCTCCTT +
Preference number: 4 (lower is better)
Translates to: ELLLSFLHDYICQGHVIFWFRSH*QKLDLL
Trigger: AAGGAGATCAAGCTTTTGGCAATGAGATCTAAACCA...GAAGATGACATGGCCTTGGCAAATGTAGTCATGCAGGAAGCTCAGAAGAAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp TCGTGCTGTAAGCACAGCTTACCTAAGGTAATGATGGCATGTGCTCTAATCACAAAGATTGTATTATTCTaGTGTAGTCCAGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SCCKHSLPKVMMACALITKIVLF*CSPAWV
Trigger: CACCCAGGCTGGACTACAGCAGAATAATACAATCTT...TGTGATTAGAGCACATGCCATCATTACCTTAGGTAAGCTGTGCTTACAGCACGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR GCA 90 bp CTCTTTGACTCCACGGCTTTCTTGACAGAATTCAGGATTGCAATGGTGCTCAGGAGATGCTTTGCAATATaGCCAATCACACAGAGAATA +
Preference number: 4 (lower is better)
Translates to: LFDSTAFLTEFRIAMVLRRCFAI*PITQRI
Trigger: TATTCTCTGTGTGATTGGGCATATTGCAAAGCATCT...CCTGAGCACCATTGCAATCCTGAATTCTGTCAAGAAAGCCGTGGAGTCAAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp GATTGTCTAAGGCCAAAGGCAATTGCGAAATCAAGTCTGTCAAGTACAATAACAGCTCTACAAAGCCTCTaGAAGGCGTCAACAGCTGAA +
Preference number: 4 (lower is better)
Translates to: DCLRPKAIAKSSLSSTITALQSL*KASTAE
Trigger: TTCAGCTGTTGACGCCTTGCAGAGGCTTTGTAGAGC...TGTTATTGTACTTGACAGACTTGATTTCGCAATTGCCTTTGGCCTTAGACAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp CTTCATTCTTTGTTATTTGCTCTTACGTTGGGTTTGTCTCTTCTTCCTAGCATTGAATCAGAAGGAAGATaGGCTTCTCCACCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LHSLLFALTLGLSLLPSIESEGR*ASPPWL
Trigger: CAGCCAGGGTGGAGAAGCGCATCTTCCTTCTGATTC...AATGCTAGGAAGAAGAGACAAACCCAACGTAAGAGCAAATAACAAAGAATGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp TGTTCTTTCTTTCTTTTCCGATTCAAGTTAGATTCCTGGGGCCAGCTCTTCTTTTCTCTGCTTCTATGCTaGGATCCAAAGGCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: CSFFLFRFKLDSWGQLFFSLLLC*DPKAQS
Trigger: AGACTGAGCCTTTGGATCCCAGCATAGAAGCAGAGA...AAAGAAGAGCTGGCCCCAGGAATCTAACTTGAATCGGAAAAGAAAGAAAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533155.5
CDS-3UTR CCA 90 bp AAAAGCTTGATCTCCTTTGAGCTGAGGACCTCAAACGTGTCTGAGAGTAACTCAATAAACTGGACCGCCTaGTTTCTACAGTTGATGACT +
Preference number: 4 (lower is better)
Translates to: KSLISFELRTSNVSESNSINWTA*FLQLMT
Trigger: AGTCATCAACTGTAGAAACCAGGCGGTCCAGTTTAT...TGAGTTACTCTCAGACACGTTTGAGGTCCTCAGCTCAAAGGAGATCAAGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp AAAAGCTTGATCTCCTTTGAGCTGAGGACCTCAAACGTGTCTGAGAGTAACTCAGACACATGGAGATGTTaGGAATATACTTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: KSLISFELRTSNVSESNSDTWRC*EYTCPP
Trigger: TGGTGGACAAGTATATTCCCAACATCTCCATGTGTC...TGAGTTACTCTCAGACACGTTTGAGGTCCTCAGCTCAAAGGAGATCAAGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp GCAGTGATAAACATAAGATGTCATTTCCTTGACTCCGGCCTTCAATTTTCTCTTCCTCTTCTGAACTTGTaGGATGAGCTTCTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: AVINIRCHFLDSGLQFSLPLLNL*DELLLS
Trigger: GCTCAGAAGAAGCTCATCTCACAAGTTCAGAAGAGG...AAGAGAAAATTGAAGGCCGGAGTCAAGGAAATGACATCTTATGTTTATCACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR TCA 90 bp CTTCATTCTTTGTTATTTGCTCTTACGTTGGGTTTGTCTCTTCTTCCTAGCATTCACAAGGAAGTTTACTaGGCAGCTGGACTAGGGACT +
Preference number: 4 (lower is better)
Translates to: LHSLLFALTLGLSLLPSIHKEVY*AAGLGT
Trigger: AGTCCCTAGTCCAGCTGCTCAGTAAACTTCCTTGTG...AATGCTAGGAAGAAGAGACAAACCCAACGTAAGAGCAAATAACAAAGAATGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp CTTCATTCTTTGTTATTTGCTCTTACGTTGGGTTTGTCTCTTCTTCCTAGCATTTGGTCTTCTCATCCCTaGTCCTCCTTCTCAGCATTG +
Preference number: 4 (lower is better)
Translates to: LHSLLFALTLGLSLLPSIWSSHP*SSFSAL
Trigger: CAATGCTGAGAAGGAGGATCAGGGATGAGAAGACCA...AATGCTAGGAAGAAGAGACAAACCCAACGTAAGAGCAAATAACAAAGAATGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp ATCAGCAAAGCACGCCAAAATACTAAGGCAGATTTTGGAAGTGATGTTGAATCGACCTCTAGAGACCACTaGAATCCATTCAGCTTACAC +
Preference number: 4 (lower is better)
Translates to: ISKARQNTKADFGSDVESTSRDH*NPFSLH
Trigger: GTGTAAGCTGAATGGATTTCAGTGGTCTCTAGAGGT...CGATTCAACATCACTTCCAAAATCTGCCTTAGTATTTTGGCGTGCTTTGCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp TTCTTTCTTTTCCGATTCAAGTTAGATTCCTGGGGCCAGCTCTTCTTTAGAGTCAGTCTCTATGATCTCTaGTTCTATGCTGGGATCCAA +
Preference number: 4 (lower is better)
Translates to: FFLFRFKLDSWGQLFFRVSLYDL*FYAGIQ
Trigger: TTGGATCCCAGCATAGAAGCAGAGATCATAGAGACT...GACTCTAAAGAAGAGCTGGCCCCAGGAATCTAACTTGAATCGGAAAAGAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533155.5
CDS-3UTR GCA 90 bp ATCAGCAAAGCACGCCAAAATACTAAGGCAGATTTTGGAAGTGATGTTGAATCGGTGCCGAATGTTCCGTaGCAGTGTGAGATATTACAT +
Preference number: 4 (lower is better)
Translates to: ISKARQNTKADFGSDVESVPNVP*QCEILH
Trigger: ATGTAATATCTCACACTGGCACGGAACATTCGGCAC...CGATTCAACATCACTTCCAAAATCTGCCTTAGTATTTTGGCGTGCTTTGCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp CTTCATTCTTTGTTATTTGCTCTTACGTTGGGTTTGTCTCTTCTTCCTAGCATTTGTGTGCCTGGAGAATaGCTCTCACTACTCACCTTG +
Preference number: 4 (lower is better)
Translates to: LHSLLFALTLGLSLLPSICVPGE*LSLLTL
Trigger: CAAGGTGAGTAGTGAGAGCCATTCTCCAGGCACACA...AATGCTAGGAAGAAGAGACAAACCCAACGTAAGAGCAAATAACAAAGAATGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR TCA 90 bp GCAGTGATAAACATAAGATGTCATTTCCTTGACTCCGGCCTTCAATTTTCTCTTGAATTGGGATTCTGCTaGCTGCTGATTTTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: AVINIRCHFLDSGLQFSLELGFC*LLIFSQ
Trigger: TTGGGAGAAAATCAGCAGTCAGCAGAATCCCAATTC...AAGAGAAAATTGAAGGCCGGAGTCAAGGAAATGACATCTTATGTTTATCACTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp CATAAGGAGGTCTTTGTCTGGTTTAGATCTCATTGCCAAAAGCTTGATCTCCTTAGTCTCTATGATCTCTaGTTCTATGCTGGGATCCAA +
Preference number: 4 (lower is better)
Translates to: HKEVFVWFRSHCQKLDLLSLYDL*FYAGIQ
Trigger: TTGGATCCCAGCATAGAAGCAGAGATCATAGAGACT...AAGGAGATCAAGCTTTTGGCAATGAGATCTAAACCAGACAAAGACCTCCTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp CTGTTCTTTCTTTCTTTTCCGATTCAAGTTAGATTCCTGGGGCCAGCTCTTCTTTTTGTCAAACATCACTaGGTGGAATACTTGATTGGC +
Preference number: 4 (lower is better)
Translates to: LFFLSFPIQVRFLGPALLFVKHH*VEYLIG
Trigger: GCCAATCAAGTATTCCACCCAGTGATGTTTGACAAA...AAGAAGAGCTGGCCCCAGGAATCTAACTTGAATCGGAAAAGAAAGAAAGAACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533155.5
CDS-3UTR CCA 90 bp TGTTCTTTCTTTCTTTTCCGATTCAAGTTAGATTCCTGGGGCCAGCTCTTCTTTTTCAAGTTAGATTCCTaGGGCCAGCTCTTCTTTAGA +
Preference number: 4 (lower is better)
Translates to: CSFFLFRFKLDSWGQLFFFKLDS*GQLFFR
Trigger: TCTAAAGAAGAGCTGGCCCCAGGAATCTAACTTGAA...AAAGAAGAGCTGGCCCCAGGAATCTAACTTGAATCGGAAAAGAAAGAAAGAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533155.5
CDS-3UTR TCA 90 bp CATAAGGAGGTCTTTGTCTGGTTTAGATCTCATTGCCAAAAGCTTGATCTCCTTTTTCATAGAGTTTTGTaGATGCAGCCAATCCAGTCT +
Preference number: 4 (lower is better)
Translates to: HKEVFVWFRSHCQKLDLLFHRVL*MQPIQS
Trigger: AGACTGGATTGGCTGCATTCACAAAACTCTATGAAA...AAGGAGATCAAGCTTTTGGCAATGAGATCTAAACCAGACAAAGACCTCCTTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp TTCTTTCTTTTCCGATTCAAGTTAGATTCCTGGGGCCAGCTCTTCTTTAGAGTCATAGAGTTTTGTGAATaGAGCCAATCCAGTCTCTAT +
Preference number: 4 (lower is better)
Translates to: FFLFRFKLDSWGQLFFRVIEFCE*SQSSLY
Trigger: ATAGAGACTGGATTGGCTGCATTCACAAAACTCTAT...GACTCTAAAGAAGAGCTGGCCCCAGGAATCTAACTTGAATCGGAAAAGAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533155.5
CDS-3UTR GCA 90 bp ATGACTACATTTGCCAAGGCCATGTCATCTTCTTCCATAAGGAGGTCTTTGTCTAAAATGATAGAACAATaGCACCAGTGTACTATGGGA +
Preference number: 4 (lower is better)
Translates to: MTTFAKAMSSSSIRRSLSKMIEQ*HQCTMG
Trigger: TCCCATAGTACACTGGTGGCATTGTTCTATCATTTT...AGACAAAGACCTCCTTATGGAAGAAGATGACATGGCCTTGGCAAATGTAGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR GCA 90 bp TTCATTCTTTGTTATTTGCTCTTACGTTGGGTTTGTCTCTTCTTCCTAGCATTTCCTCCTTCTCAGCATTaGCATGACACATCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: FILCYLLLRWVCLFFLAFPPSQH*HDTSFS
Trigger: GGAGAAAGATGTGTCATGGCAATGCTGAGAAGGAGG...AAATGCTAGGAAGAAGAGACAAACCCAACGTAAGAGCAAATAACAAAGAATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp AATGGGAGAGCACAGCAAATACAATCCATAATAAGCCAGTTCTGGTATGTATTTCTTGATTGGCTACACTaGCTCCATAGATCCATGTTC +
Preference number: 4 (lower is better)
Translates to: NGRAQQIQSIISQFWYVFLDWLH*LHRSMF
Trigger: GAACATGGATCTATGGAGGCAGTGTAGCCAATCAAG...AAATACATACCAGAACTGGCTTATTATGGATTGTATTTGCTGTGCTCTCCCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533155.5
CDS-3UTR GCA 90 bp TTCATTCTTTGTTATTTGCTCTTACGTTGGGTTTGTCTCTTCTTCCTAGCATTTCCTGGATGCTTAGCATaGAAGTTCCCTCCATCATTG +
Preference number: 4 (lower is better)
Translates to: FILCYLLLRWVCLFFLAFPGCLA*KFPPSL
Trigger: CAATGATGGAGGGAACTTGCATGCTAAGCATCCAGG...AAATGCTAGGAAGAAGAGACAAACCCAACGTAAGAGCAAATAACAAAGAATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp AATGGGAGAGCACAGCAAATACAATCCATAATAAGCCAGTTCTGGTATGTATTTCAATATCTTCTCTCCTaGGTGGCTTTCCCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: NGRAQQIQSIISQFWYVFQYLLS*VAFPFF
Trigger: GAAAAAGGGGAAAGCCACCCAGGAGAGAAGATATTG...AAATACATACCAGAACTGGCTTATTATGGATTGTATTTGCTGTGCTCTCCCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533155.5
CDS-3UTR CCA 90 bp CTTCATTCTTTGTTATTTGCTCTTACGTTGGGTTTGTCTCTTCTTCCTAGCATTCTCCTTCTCCATGAATaGGAGAGCACAGCAAATACA +
Preference number: 4 (lower is better)
Translates to: LHSLLFALTLGLSLLPSILLLHE*ESTANT
Trigger: TGTATTTGCTGTGCTCTCCCATTCATGGAGAAGGAG...AATGCTAGGAAGAAGAGACAAACCCAACGTAAGAGCAAATAACAAAGAATGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp GCAGTGATAAACATAAGATGTCATTTCCTTGACTCCGGCCTTCAATTTTCTCTTATAAACTGGACCGCCTaGTTTCTACAGTTGATGACT +
Preference number: 4 (lower is better)
Translates to: AVINIRCHFLDSGLQFSLINWTA*FLQLMT
Trigger: AGTCATCAACTGTAGAAACCAGGCGGTCCAGTTTAT...AAGAGAAAATTGAAGGCCGGAGTCAAGGAAATGACATCTTATGTTTATCACTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CCA 90 bp GATTGTCTAAGGCCAAAGGCAATTGCGAAATCAAGTCTGTCAAGTACAATAACAATAAACTGGACCGCCTaGTTTCTACAGTTGATGACT +
Preference number: 4 (lower is better)
Translates to: DCLRPKAIAKSSLSSTITINWTA*FLQLMT
Trigger: AGTCATCAACTGTAGAAACCAGGCGGTCCAGTTTAT...TGTTATTGTACTTGACAGACTTGATTTCGCAATTGCCTTTGGCCTTAGACAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp AATGGGAGAGCACAGCAAATACAATCCATAATAAGCCAGTTCTGGTATGTATTTGGTGGAATACTTGATTaGCTACACTGCCTCCATAGA +
Preference number: 4 (lower is better)
Translates to: NGRAQQIQSIISQFWYVFGGILD*LHCLHR
Trigger: TCTATGGAGGCAGTGTAGCCAATCAAGTATTCCACC...AAATACATACCAGAACTGGCTTATTATGGATTGTATTTGCTGTGCTCTCCCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533155.5
CDS-3UTR TCA 90 bp GATTGTCTAAGGCCAAAGGCAATTGCGAAATCAAGTCTGTCAAGTACAATAACAATGAAATTCCTCTTCTaGACTTGTGAGATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: DCLRPKAIAKSSLSSTITMKFLF*TCEMSF
Trigger: GAAGCTCATCTCACAAGTTCAGAAGAGGAATTTCAT...TGTTATTGTACTTGACAGACTTGATTTCGCAATTGCCTTTGGCCTTAGACAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp TTCATTCTTTGTTATTTGCTCTTACGTTGGGTTTGTCTCTTCTTCCTAGCATTTCTTGATTGGCTACACTaGCTGGTACTTCTAGTAGCA +
Preference number: 4 (lower is better)
Translates to: FILCYLLLRWVCLFFLAFLDWLH*LVLLVA
Trigger: TGCTACTAGAAGTACCAGGCAGTGTAGCCAATCAAG...AAATGCTAGGAAGAAGAGACAAACCCAACGTAAGAGCAAATAACAAAGAATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp TTCATTCTTTGTTATTTGCTCTTACGTTGGGTTTGTCTCTTCTTCCTAGCATTTCCTTTGGATGGATGTTaGTGTACACAGATGCTACAG +
Preference number: 4 (lower is better)
Translates to: FILCYLLLRWVCLFFLAFPLDGC*CTQMLQ
Trigger: CTGTAGCATCTGTGTACAGCAACATCCATCCAAAGG...AAATGCTAGGAAGAAGAGACAAACCCAACGTAAGAGCAAATAACAAAGAATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CAA 72 bp TTGCTTCATTCTTTGTTATTTGCTCTTACGTTGGGTTaGTCTCTTCTTCCTAGCATTTCAGTGGTTAGGCAT +
Preference number: 4 (lower is better)
Translates to: LLHSLLFALTLG*SLLPSISVVRH
Trigger: ATGCCTAACCACTGAAATGCTAGGAAGAAGAGACAAACCCAACGTAAGAGCAAATAACAAAGAATGAAGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
3UTR CAA 72 bp CAATCCATAATAAGCCAGTTCTGGTATGTATTTTGCTaGGTTAAGAGCTCTGGCTTGTGTAACATGACATTC +
Preference number: 4 (lower is better)
Translates to: QSIISQFWYVFC*VKSSGLCNMTF
Trigger: GAATGTCATGTTACACAAGCCAGAGCTCTTAACCAAGCAAAATACATACCAGAACTGGCTTATTATGGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533155.5
CDS-3UTR TCA 90 bp AGAGCACAGCAAATACAATCCATAATAAGCCAGTTCTGGTATGTATTTTGCTTGTTTCATAGAGTTTTGTaGATGCAGCCAATCCAGTCT +
Preference number: 4 (lower is better)
Translates to: RAQQIQSIISQFWYVFCLFHRVL*MQPIQS
Trigger: AGACTGGATTGGCTGCATTCACAAAACTCTATGAAA...CAAGCAAAATACATACCAGAACTGGCTTATTATGGATTGTATTTGCTGTGCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533155.5
CDS-3UTR TCA 90 bp CTTCATTCTTTGTTATTTGCTCTTACGTTGGGTTTGTCTCTTCTTCCTAGCATTAAAAGTACGATACTCTaGTTTATCTACCACCTTGGC +
Preference number: 4 (lower is better)
Translates to: LHSLLFALTLGLSLLPSIKSTIL*FIYHLG
Trigger: GCCAAGGTGGTAGATAAATCAGAGTATCGTACTTTT...AATGCTAGGAAGAAGAGACAAACCCAACGTAAGAGCAAATAACAAAGAATGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp AATGGGAGAGCACAGCAAATACAATCCATAATAAGCCAGTTCTGGTATGTATTTTTCTGGTATGTATTTTaGTTGGTTAAGAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: NGRAQQIQSIISQFWYVFFWYVF*LVKSSG
Trigger: GCCAGAGCTCTTAACCAAGCAAAATACATACCAGAA...AAATACATACCAGAACTGGCTTATTATGGATTGTATTTGCTGTGCTCTCCCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533155.5
CDS-3UTR GCA 90 bp GATTGTCTAAGGCCAAAGGCAATTGCGAAATCAAGTCTGTCAAGTACAATAACAAGATGCTTTGCAATATaGCCAATCACACAGAGAATA +
Preference number: 4 (lower is better)
Translates to: DCLRPKAIAKSSLSSTITRCFAI*PITQRI
Trigger: TATTCTCTGTGTGATTGGGCATATTGCAAAGCATCT...TGTTATTGTACTTGACAGACTTGATTTCGCAATTGCCTTTGGCCTTAGACAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR GCA 90 bp TTCATTCTTTGTTATTTGCTCTTACGTTGGGTTTGTCTCTTCTTCCTAGCATTTCTTAGGAAGATGCTTTaGAATATGCCCAATCACACA +
Preference number: 4 (lower is better)
Translates to: FILCYLLLRWVCLFFLAFLRKML*NMPNHT
Trigger: TGTGTGATTGGGCATATTGCAAAGCATCTTCCTAAG...AAATGCTAGGAAGAAGAGACAAACCCAACGTAAGAGCAAATAACAAAGAATGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CCA 90 bp ATACAATCCATAATAAGCCAGTTCTGGTATGTATTTTGCTTGGTTAAGAGCTCTGGTATGTATTTTGCTTaGTTAAGAGCTCTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: IQSIISQFWYVFCLVKSSGMYFA*LRALAC
Trigger: ACAAGCCAGAGCTCTTAACCAAGCAAAATACATACC...AGAGCTCTTAACCAAGCAAAATACATACCAGAACTGGCTTATTATGGATTGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533155.5
CDS-3UTR CCA 90 bp TTCATTCTTTGTTATTTGCTCTTACGTTGGGTTTGTCTCTTCTTCCTAGCATTTTTCCTAGCATTTCAGTaGTTAGGCATGCACACTAAA +
Preference number: 4 (lower is better)
Translates to: FILCYLLLRWVCLFFLAFFLAFQ*LGMHTK
Trigger: TTTAGTGTGCATGCCTAACCACTGAAATGCTAGGAA...AAATGCTAGGAAGAAGAGACAAACCCAACGTAAGAGCAAATAACAAAGAATGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS GCA 90 bp CCCGCGCGCGCGCCGAGTCGTTCCGAGACCCGCCCGGCCCGGCGGTaGGATGAGCTTCTTCGGCTTCGGGCAGAGCGTGGAGGTGGAAAT +
Preference number: 5 (lower is better)
Translates to: PARAPSRSETRPARR*DELLRLRAERGGGN
Trigger: ATTTCCACCTCCACGCTCTGCCCGAAGCCGAAGAAGCTCATCGCACCGCCGGGCCGGGCGGGTCTCGGAACGACTCGGCGCGCGCGCGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532445.1
ENST00000534227.5
CDS TCA 90 bp GCGCGCGCCGAGTCGTTCCGAGACCCGCCCGGCCCGGCGGTGCGATaGGCTTCTTCGGCTTCGGGCAGAGCGTGGAGGTGGAAATCCTTC +
Preference number: 5 (lower is better)
Translates to: ARAESFRDPPGPAVR*ASSASGRAWRWKSF
Trigger: GAAGGATTTCCACCTCCACGCTCTGCCCGAAGCCGAAGAAGCTCATCGCACCGCCGGGCCGGGCGGGTCTCGGAACGACTCGGCGCGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532445.1
ENST00000534227.5
CDS CCA 90 bp AGGGTGTCCACATCAGTGTCCCAGCGGCGGCCCTCAGACCTCCACTaGACCCTGTCCCAGGGCCTGGCAGTGTTGAGGGCCCCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: RVSTSVSQRRPSDLH*TLSQGLAVLRAPPG
Trigger: CCCAGGAGGGGCCCTCAACACTGCCAGGCCCTGGGACAGGGTCCAGTGGAGGTCTGAGGGCCGCCGCTGGGACACTGATGTGGACACCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526787.2
CDS TCA 90 bp GACACCAGGGCTGCAGGCCGCTACCAAGGCCCCGCAACGCCACCATaGTCCCAGGGCACCGGCTCGCCGCCGCCGTGCTCAACTTTCAAA +
Preference number: 5 (lower is better)
Translates to: DTRAAGRYQGPATPP*SQGTGSPPPCSTFK
Trigger: TTTGAAAGTTGAGCACGGCGGCGGCGAGCCGGTGCCCTGGGATCATGGTGGCGTTGCGGGGCCTTGGTAGCGGCCTGCAGCCCTGGTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000525485.5
ENST00000525964.6
ENST00000526422.2
ENST00000532445.1
ENST00000534227.5
ENST00000534532.6
CDS-3UTR CAA 90 bp GCGCCTCTCCGCCACCGAGCCCACCTGTGTTGCGGTTCCCACTTGGGATGGCAGTCCTTGAGAACGATGTaGGAGAGGCGGTGCTCGCAG +
Preference number: 5 (lower is better)
Translates to: APLRHRAHLCCGSHLGWQSLRTM*ERRCSQ
Trigger: CTGCGAGCACCGCCTCTCCAACATCGTTCTCAAGGA...CTGCCATCCCAAGTGGGAACCGCAACACAGGTGGGCTCGGTGGCGGAGAGGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS TCA 90 bp CTCTGGCTTCCCTCCCGCCGTCTTCCATCATTGCCCCTGTCCCGGTaGCCGCCCTGTCCCACTTACTACACCTCCTACTGTGGCTCACCC +
Preference number: 5 (lower is better)
Translates to: LWLPSRRLPSLPLSR*PPCPTYYTSYCGSP
Trigger: GGGTGAGCCACAGTAGGAGGTGTAGTAAGTGGGACAGGGCGGTCACCGGGACAGGGGCAATGATGGAAGACGGCGGGAGGGAAGCCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526787.2
CDS GCA 90 bp AGACATCCAGTGGAACCGAGTCTAAGATCCAGCGGACACCAGGGCTaGAGGCCGCTACCAAGGCCCCGCAACGCCACCATGATCCCAGGG +
Preference number: 5 (lower is better)
Translates to: RHPVEPSLRSSGHQG*RPLPRPRNATMIPG
Trigger: CCCTGGGATCATGGTGGCGTTGCGGGGCCTTGGTAGCGGCCTGCAGCCCTGGTGTCCGCTGGATCTTAGACTCGGTTCCACTGGATGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526422.2
ENST00000532445.1
CDS CCA 90 bp AGAAGACAAGACAACTGCAGTTCTGTAGGGACTGCGCGGCACGCGTaGGCCCAGAGCCTGTCCCAGCGAGGTAGCAGCTGCCATGCCGAC +
Preference number: 5 (lower is better)
Translates to: RRQDNCSSVGTARHA*AQSLSQRGSSCHAD
Trigger: GTCGGCATGGCAGCTGCTACCTCGCTGGGACAGGCTCTGGGCCCACGCGTGCCGCGCAGTCCCTACAGAACTGCAGTTGTCTTGTCTTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525485.5
ENST00000526422.2
ENST00000534532.6
CDS CCA 90 bp CGGCGTCGTCCGCCGCACGCTCAGAGAACTGGGCGGGCCGAAAAGTaGAAGCCAAACAAGGCTCCTGCGGGTGTTCCGCTAATTCGTTCG +
Preference number: 5 (lower is better)
Translates to: RRRPPHAQRTGRAEK*KPNKAPAGVPLIRS
Trigger: CGAACGAATTAGCGGAACACCCGCAGGAGCCTTGTTTGGCTTCCACTTTTCGGCCCGCCCAGTTCTCTGAGCGTGCGGCGGACGACGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525964.6
ENST00000526422.2
ENST00000534532.6
CDS CCA 90 bp TCGCTCAACCAATCACCGGCGTCGTCCGCCGCACGCTCAGAGAACTaGGCGGGCCGAAAAGTGGAAGCCAAACAAGGCTCCTGCGGGTGT +
Preference number: 5 (lower is better)
Translates to: SLNQSPASSAARSEN*AGRKVEAKQGSCGC
Trigger: ACACCCGCAGGAGCCTTGTTTGGCTTCCACTTTTCGGCCCGCCCAGTTCTCTGAGCGTGCGGCGGACGACGCCGGTGATTGGTTGAGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525964.6
ENST00000526422.2
ENST00000534532.6
CDS-3UTR CAA 90 bp GCGCCTCTCCGCCACCGAGCCCACCTGTGTTGCGGTTCCCACTTGGGATGGCAGCCACTGCTGTCTATGTaGATCTCCCCTGAGGGTTCG +
Preference number: 5 (lower is better)
Translates to: APLRHRAHLCCGSHLGWQPLLSM*ISPEGS
Trigger: CGAACCCTCAGGGGAGATCAACATAGACAGCAGTGG...CTGCCATCCCAAGTGGGAACCGCAACACAGGTGGGCTCGGTGGCGGAGAGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS GCA 90 bp CTCACTGTTCACGCCTCTGGCTTCCCTCCCGCCGTCTTCCATCATTaGCCCTGTCCCGGTGACCGCCCTGTCCCACTTACTACACCTCCT +
Preference number: 5 (lower is better)
Translates to: LTVHASGFPPAVFHH*PCPGDRPVPLTTPP
Trigger: AGGAGGTGTAGTAAGTGGGACAGGGCGGTCACCGGGACAGGGGCAATGATGGAAGACGGCGGGAGGGAAGCCAGAGGCGTGAACAGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526787.2
CDS GCA 90 bp CGCGCGCCGAGTCGTTCCTTTGCCCTCGTCAGGCGACATTTCGCGTaGGTGTCAAAGGGCTGCCTTTCCCGTCAGCACTCGAACAGCGTA +
Preference number: 5 (lower is better)
Translates to: RAPSRSFALVRRHFA*VSKGCLSRQHSNSV
Trigger: TACGCTGTTCGAGTGCTGACGGGAAAGGCAGCCCTTTGACACGCACGCGAAATGTCGCCTGACGAGGGCAAAGGAACGACTCGGCGCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525485.5
CDS GCA 90 bp ACTGTGTCAACCCATTCGAGTCTAAGATCCAGCGGACACCAGGGCTaGAGGCCGCTACCAAGGCCCCGCAACGCCACCATGATCCCAGGG +
Preference number: 5 (lower is better)
Translates to: TVSTHSSLRSSGHQG*RPLPRPRNATMIPG
Trigger: CCCTGGGATCATGGTGGCGTTGCGGGGCCTTGGTAGCGGCCTGCAGCCCTGGTGTCCGCTGGATCTTAGACTCGAATGGGTTGACACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000525485.5
ENST00000525964.6
ENST00000533155.5
ENST00000534227.5
ENST00000534532.6
ENST00000534548.7
CDS CCA 90 bp GTGAAAGCCGCGTGGTCTATCGGAGGTCTCTGTTCTAGTTGTCCGTaGGACGTAGGCAGGGTGTCCACATCAGTGTCCCAGCGGCGGCCC +
Preference number: 5 (lower is better)
Translates to: VKAAWSIGGLCSSCP*DVGRVSTSVSQRRP
Trigger: GGGCCGCCGCTGGGACACTGATGTGGACACCCTGCCTACGTCCCACGGACAACTAGAACAGAGACCTCCGATAGACCACGCGGCTTTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526787.2
CDS-3UTR CAA 90 bp AACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCCTTAACAGAGGGAGTCAGCTCCTGGGGTaGCGCCAGGCGCCCCCGCTC +
Preference number: 5 (lower is better)
Translates to: NRRDSSCSPIMGAALNRGSQLLG*RQAPPL
Trigger: GAGCGGGGGCGCCTGGCGCAACCCCAGGAGCTGACT...CCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp CTTCTCGGGGGTGCTGATGGCCCGCTTGGTCACGTGCTCAATCTCGCCATTCGACTACATGGCCAGCACTaGCCCTGGGTGTGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: LLGGADGPLGHVLNLAIRLHGQH*PWVCRA
Trigger: AGCCCTGCACACCCAGGGCAAGTGCTGGCCATGTAG...TCGAATGGCGAGATTGAGCACGTGACCAAGCGGGCCATCAGCACCCCCGAGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp GTGTGCTCAAGAGCAGTGCTGCGCCTCTCCGCCACCGAGCCCACCTGTGTTGCGTGTAGCGTCCCAGCTTaGGGCTCCTGTAACAGACCT +
Preference number: 5 (lower is better)
Translates to: VCSRAVLRLSATEPTCVACSVPA*GSCNRP
Trigger: AGGTCTGTTACAGGAGCCCAAAGCTGGGACGCTACA...CGCAACACAGGTGGGCTCGGTGGCGGAGAGGCGCAGCACTGCTCTTGAGCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp GTGTGCTCAAGAGCAGTGCTGCGCCTCTCCGCCACCGAGCCCACCTGTGTTGCGCACTGGGTGGAATACTaGATTGGCTACACTGCCTGG +
Preference number: 5 (lower is better)
Translates to: VCSRAVLRLSATEPTCVAHWVEY*IGYTAW
Trigger: CCAGGCAGTGTAGCCAATCAAGTATTCCACCCAGTG...CGCAACACAGGTGGGCTCGGTGGCGGAGAGGCGCAGCACTGCTCTTGAGCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp GTGTGCTCAAGAGCAGTGCTGCGCCTCTCCGCCACCGAGCCCACCTGTGTTGCGCGGACAGTAGGCGCCTaGTCTAAGCAACGATCAAAC +
Preference number: 5 (lower is better)
Translates to: VCSRAVLRLSATEPTCVARTVGA*SKQRSN
Trigger: GTTTGATCGTTGCTTAGACAAGGCGCCTACTGTCCG...CGCAACACAGGTGGGCTCGGTGGCGGAGAGGCGCAGCACTGCTCTTGAGCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp TCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGCTACATGGCCAGCACTaGCCCTGGGTGTGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: SFGGTSCCRLECLYSWRELHGQH*PWVCRA
Trigger: AGCCCTGCACACCCAGGGCAAGTGCTGGCCATGTAG...CTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp GTGTGCTCAAGAGCAGTGCTGCGCCTCTCCGCCACCGAGCCCACCTGTGTTGCGGCTCCAGCCTCCTTCTaGGTTGTCATAGTGATAGGG +
Preference number: 5 (lower is better)
Translates to: VCSRAVLRLSATEPTCVAAPASF*VVIVIG
Trigger: CCCTATCACTATGACAACCAAGAAGGAGGCTGGAGC...CGCAACACAGGTGGGCTCGGTGGCGGAGAGGCGCAGCACTGCTCTTGAGCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp TGGCGGCCAGTCCAGCCTTTTAAAGAACGTCAGGTGGAGCAGCCAGGTGAAAGGTCCCCACCCTCAGCGTaGGGGATTCACGCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: WRPVQPFKERQVEQPGERSPPSA*GIHAPA
Trigger: GGCTGGAGCGTGAATCCCCAACGCTGAGGGTGGGGA...CCTTTCACCTGGCTGCTCCACCTGACGTTCTTTAAAAGGCTGGACTGGCCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS GCA 90 bp TGTGGCTCACCCAGATTCCCTGAGGACACTTCAACTCCTTGCCTCTaGACCTCCACGCGTGCCTGCTGGTTTCCAGCCAGTGACTGGAGC +
Preference number: 5 (lower is better)
Translates to: CGSPRFPEDTSTPCL*TSTRACWFPASDWS
Trigger: GCTCCAGTCACTGGCTGGAAACCAGCAGGCACGCGTGGAGGTGCAGAGGCAAGGAGTTGAAGTGTCCTCAGGGAATCTGGGTGAGCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526787.2
CDS GCA 90 bp TTTCCTCTTCTACGACGGGGAGACGGTCTCCGGGAAGGTGAGCCTTaGCCTCAAGAACCCCAACAAGCGGCTGGAGCACCAGGGCATCAA +
Preference number: 5 (lower is better)
Translates to: FPLLRRGDGLREGEP*PQEPQQAAGAPGHQ
Trigger: TTGATGCCCTGGTGCTCCAGCCGCTTGTTGGGGTTCTTGAGGGCAAGGCTCACCTTCCCGGAGACCGTCTCCCCGTCGTAGAAGAGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532445.1
ENST00000534227.5
CDS-3UTR CAA 90 bp GCTCAGGGACATGGGCCTGGCTTTGGGCAGCAACCTCTGCAATGGCCCTGTTTCGACATGGGCCTGGCTTaGGGCAGCAACCTCTGCAAT +
Preference number: 5 (lower is better)
Translates to: AQGHGPGFGQQPLQWPCFDMGLA*GSNLCN
Trigger: ATTGCAGAGGTTGCTGCCCAAAGCCAGGCCCATGTC...GAAACAGGGCCATTGCAGAGGTTGCTGCCCAAAGCCAGGCCCATGTCCCTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp CACTGTTCCTCTTTGCCACAGAGAAAGCACCCAGACGCCACAGGCTCTGTCGCACCGAGCCCACCTGTGTaGCGGTTCCCACTTGGGATG +
Preference number: 5 (lower is better)
Translates to: HCSSLPQRKHPDATGSVAPSPPV*RFPLGM
Trigger: CATCCCAAGTGGGAACCGCAACACAGGTGGGCTCGG...TGCGACAGAGCCTGTGGCGTCTGGGTGCTTTCTCTGTGGCAAAGAGGAACAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS GCA 90 bp TCAGAGAACTGGGCGGGCCGAAAAGTGGAAGCCAAACAAGGCTCCTaGGGGTGTTCCGCTAATTCGTTCGAGAAGGAGCCAGGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: SENWAGRKVEAKQGS*GCSANSFEKEPGPE
Trigger: CTCAGGCCCTGGCTCCTTCTCGAACGAATTAGCGGAACACCCGCAGGAGCCTTGTTTGGCTTCCACTTTTCGGCCCGCCCAGTTCTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525964.6
ENST00000526422.2
ENST00000534532.6
CDS GCA 90 bp CAGCCACGTCCTCACACACCTCGAGCTCTCGCACCAGGGCTGGGATaGTCTTCTTTGCCAGATCCTCGTGCTGTAAGCACAGCTTACCTG +
Preference number: 5 (lower is better)
Translates to: QPRPHTPRALAPGLG*SSLPDPRAVSTAYL
Trigger: CAGGTAAGCTGTGCTTACAGCACGAGGATCTGGCAAAGAAGAGCATCCCAGCCCTGGTGCGAGAGCTCGAGGTGTGTGAGGACGTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530396.1
CDS CCA 90 bp GACTGGAGGGCCTGCTTCCGGACAGACACTGCAGGGTCCCGACACTaGTCCTGCAGAATCCACAGGTCTTCCTTCATGCCTGAGACATCA +
Preference number: 5 (lower is better)
Translates to: DWRACFRTDTAGSRH*SCRIHRSSFMPETS
Trigger: TGATGTCTCAGGCATGAAGGAAGACCTGTGGATTCTGCAGGACCAGTGTCGGGACCCTGCAGTGTCTGTCCGGAAGCAGGCCCTCCAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525964.6
ENST00000534532.6
ENST00000534548.7
CDS-3UTR CAA 90 bp CCTCCAGCCGTCCCGGCCACATCTGCATGTTTTGCTAGCTCCTGCTCCTGGACCCACTGGGTGGAATACTaGATTGGCTACACTGCCTGG +
Preference number: 5 (lower is better)
Translates to: PPAVPATSACFASSCSWTHWVEY*IGYTAW
Trigger: CCAGGCAGTGTAGCCAATCAAGTATTCCACCCAGTG...GGTCCAGGAGCAGGAGCTAGCAAAACATGCAGATGTGGCCGGGACGGCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp CCTCCAGCCGTCCCGGCCACATCTGCATGTTTTGCTAGCTCCTGCTCCTGGACCCGGACAGTAGGCGCCTaGTCTAAGCAACGATCAAAC +
Preference number: 5 (lower is better)
Translates to: PPAVPATSACFASSCSWTRTVGA*SKQRSN
Trigger: GTTTGATCGTTGCTTAGACAAGGCGCCTACTGTCCG...GGTCCAGGAGCAGGAGCTAGCAAAACATGCAGATGTGGCCGGGACGGCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp TCGTGTTCCACAGCAAAGCGCTGCCCAAGGACTGCGGGAAGTGATCCAGCTGCCCCACTGCTGTCTATGTaGATCTCCCCTGAGGGTTCG +
Preference number: 5 (lower is better)
Translates to: SCSTAKRCPRTAGSDPAAPLLSM*ISPEGS
Trigger: CGAACCCTCAGGGGAGATCAACATAGACAGCAGTGG...GGCAGCTGGATCACTTCCCGCAGTCCTTGGGCAGCGCTTTGCTGTGGAACACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534532.6
ENST00000534548.7
CDS-3UTR CAA 90 bp GGTGCCACCTCAGCACCTCCAGCCGTCCCGGCCACATCTGCATGTTTTGCTAGCACAGCATCAGTCACTTaGTCCCGGGTGCTCTTAGGA +
Preference number: 5 (lower is better)
Translates to: GATSAPPAVPATSACFASTASVT*SRVLLG
Trigger: TCCTAAGAGCACCCGGGACAAAGTGACTGATGCTGT...GCTAGCAAAACATGCAGATGTGGCCGGGACGGCTGGAGGTGCTGAGGTGGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp GTTCCTCTTTGCCACAGAGAAAGCACCCAGACGCCACAGGCTCTGTCGCATTTCCTACATGGCCAGCACTaGCCCTGGGTGTGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: VPLCHRESTQTPQALSHFLHGQH*PWVCRA
Trigger: AGCCCTGCACACCCAGGGCAAGTGCTGGCCATGTAG...GAAATGCGACAGAGCCTGTGGCGTCTGGGTGCTTTCTCTGTGGCAAAGAGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp GCTGTTCCCCCATCATGGGAGCAGCCCTTAACAGAGGGCTGCACAAATCGGCAGTGTTGCGGTTCCCACTaGGGATGGCAGTGGGCAGAT +
Preference number: 5 (lower is better)
Translates to: AVPPSWEQPLTEGCTNRQCCGSH*GWQWAD
Trigger: ATCTGCCCACTGCCATCCCAAGTGGGAACCGCAACA...CTGCCGATTTGTGCAGCCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp TCGTGTTCCACAGCAAAGCGCTGCCCAAGGACTGCGGGAAGTGATCCAGCTGCCTCCATCATTGCCACCTaGGTAGAGAGGGATGGCTCC +
Preference number: 5 (lower is better)
Translates to: SCSTAKRCPRTAGSDPAASIIAT*VERDGS
Trigger: GGAGCCATCCCTCTCTACCAAGGTGGCAATGATGGA...GGCAGCTGGATCACTTCCCGCAGTCCTTGGGCAGCGCTTTGCTGTGGAACACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS TCA 90 bp GGAGAAGCCCACGTGTTCCGATCAGTTACTCACTCTCGGGGGTGCTaGTGGCCCGCTTGGTCACGTGCTCAATCTCGCCATTCGACTCTT +
Preference number: 5 (lower is better)
Translates to: GEAHVFRSVTHSRGC*WPAWSRAQSRHSTL
Trigger: AAGAGTCGAATGGCGAGATTGAGCACGTGACCAAGCGGGCCATCAGCACCCCCGAGAGTGAGTAACTGATCGGAACACGTGGGCTTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525432.1
CDS TCA 90 bp AGAAATATTTCCTCTTCTACGACGGGGAGACGGTCTCCGGGAAGGTaGGCCTTGCCCTCAAGAACCCCAACAAGCGGCTGGAGCACCAGG +
Preference number: 5 (lower is better)
Translates to: RNISSSTTGRRSPGR*ALPSRTPTSGWSTR
Trigger: CCTGGTGCTCCAGCCGCTTGTTGGGGTTCTTGAGGGCAAGGCTCACCTTCCCGGAGACCGTCTCCCCGTCGTAGAAGAGGAAATATTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532445.1
ENST00000534227.5
CDS GCA 90 bp CCGGTAGTAACTGTCACCTTTGCCCTCGTCAGGCGACATTTCGCGTaGGTGTCAAAGGGCTGCCTTTCCCGTCAGCACTCGAACAGCGTA +
Preference number: 5 (lower is better)
Translates to: PVVTVTFALVRRHFA*VSKGCLSRQHSNSV
Trigger: TACGCTGTTCGAGTGCTGACGGGAAAGGCAGCCCTTTGACACGCACGCGAAATGTCGCCTGACGAGGGCAAAGGTGACAGTTACTACCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526422.2
ENST00000534532.6
CDS-3UTR CAA 90 bp TGTCTGAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATGCCATCAGCAAGTGCTGATGGCCCGCTaGGTCACGTGCTCAATCTCG +
Preference number: 5 (lower is better)
Translates to: CLRVTHWRPGPGVGCHQQVLMAR*VTCSIS
Trigger: CGAGATTGAGCACGTGACCAAGCGGGCCATCAGCAC...TTGCTGATGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp AGGGATGGCTCCCCACCCTCAGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGGATGGCATTTCGAATTaGAGAAAGGTCCCGGGCAGA +
Preference number: 5 (lower is better)
Translates to: RDGSPPSALGIHAPASFLDGISN*RKVPGR
Trigger: TCTGCCCGGGACCTTTCTCAAATTCGAAATGCCATC...CAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCTGAGGGTGGGGAGCCATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp GGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGCCACATCTGCATGTTTaGCTAGCTCCTGCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: GVFRRDLLLQAGVSLFLAPHLHV*LAPAPG
Trigger: TCCAGGAGCAGGAGCTAGCAAAACATGCAGATGTGG...CGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp GGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGCACTGGGTGGAATACTaGATTGGCTACACTGCCTGG +
Preference number: 5 (lower is better)
Translates to: GVFRRDLLLQAGVSLFLAHWVEY*IGYTAW
Trigger: CCAGGCAGTGTAGCCAATCAAGTATTCCACCCAGTG...CGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp TCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATTCCACTTCCTTGAGAACGATGTaGGAGAGGCGGTGCTCGCAG +
Preference number: 5 (lower is better)
Translates to: SCCRLECLYSWRETAHSTSLRTM*ERRCSQ
Trigger: CTGCGAGCACCGCCTCTCCAACATCGTTCTCAAGGA...AGTGGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp GACAGCCACGTCCTCACACACCTCGAGCTCTCGCACCAGGGCTGGGATGCTCTTCCTGTTCCATTCTCCTaGAGAACGATGTTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: DSHVLTHLELSHQGWDALPVPFS*RTMLER
Trigger: CCTCTCCAACATCGTTCTCAAGGAGAATGGAACAGG...AAGAGCATCCCAGCCCTGGTGCGAGAGCTCGAGGTGTGTGAGGACGTGGCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR CAA 90 bp CACTGTTCCTCTTTGCCACAGAGAAAGCACCCAGACGCCACAGGCTCTGTCGCACATGGCAGGGTTTTCTaGGCCAGCAGGAACTGGCAC +
Preference number: 5 (lower is better)
Translates to: HCSSLPQRKHPDATGSVAHGRVF*ASRNWH
Trigger: GTGCCAGTTCCTGCTGGCCAAGAAAACCCTGCCATG...TGCGACAGAGCCTGTGGCGTCTGGGTGCTTTCTCTGTGGCAAAGAGGAACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS TCA 90 bp TTTCCAGCCAGTGACTGGAGCATGCGCGCTGGAAATATGGCACCGTaGGCAGCTCCTCCACATGGAATCAGCAGCCAAGTCCTGTCCCTT +
Preference number: 5 (lower is better)
Translates to: FPASDWSMRAGNMAP*AAPPHGISSQVLSL
Trigger: AAGGGACAGGACTTGGCTGCTGATTCCATGTGGAGGAGCTGCTCACGGTGCCATATTTCCAGCGCGCATGCTCCAGTCACTGGCTGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526787.2
CDS GCA 90 bp AATAAGGGAAAAGTAGCCGAAAGCACTCCGAGAAGACAAGACAACTaGAGTTCTGTAGGGACTGCGCGGCACGCGTGGGCCCAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: NKGKVAESTPRRQDN*SSVGTARHAWAQSL
Trigger: CAGGCTCTGGGCCCACGCGTGCCGCGCAGTCCCTACAGAACTGCAGTTGTCTTGTCTTCTCGGAGTGCTTTCGGCTACTTTTCCCTTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525485.5
ENST00000526422.2
ENST00000534532.6
CDS-3UTR CAA 90 bp GGTGCCACCTCAGCACCTCCAGCCGTCCCGGCCACATCTGCATGTTTTGCTAGCGACTCCACGGCTTTCTaGACAGAATTCAGGATTGCA +
Preference number: 5 (lower is better)
Translates to: GATSAPPAVPATSACFASDSTAF*TEFRIA
Trigger: TGCAATCCTGAATTCTGTCAAGAAAGCCGTGGAGTC...GCTAGCAAAACATGCAGATGTGGCCGGGACGGCTGGAGGTGCTGAGGTGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp CAGCCGTCCCGGCCACATCTGCATGTTTTGCTAGCTCCTGCTCCTGGACCAGCTGATGGCATTTCGAATTaGAGAAAGGTCCCGGGCAGA +
Preference number: 5 (lower is better)
Translates to: QPSRPHLHVLLAPAPGPADGISN*RKVPGR
Trigger: TCTGCCCGGGACCTTTCTCAAATTCGAAATGCCATC...AGCTGGTCCAGGAGCAGGAGCTAGCAAAACATGCAGATGTGGCCGGGACGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp GTGTGCTCAAGAGCAGTGCTGCGCCTCTCCGCCACCGAGCCCACCTGTGTTGCGTGGTATGTATTTTGCTaGGTTAAGAGCTCTGGCTTG +
Preference number: 5 (lower is better)
Translates to: VCSRAVLRLSATEPTCVAWYVFC*VKSSGL
Trigger: CAAGCCAGAGCTCTTAACCAAGCAAAATACATACCA...CGCAACACAGGTGGGCTCGGTGGCGGAGAGGCGCAGCACTGCTCTTGAGCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp CCACCTGTGTTGCGGTTCCCACTTGGGATGGCAGTGGGCAGATCTCAGTGGCATACCCGGTGTGGGATCTaGGAACTTCGGGAGTATTTG +
Preference number: 5 (lower is better)
Translates to: PPVLRFPLGMAVGRSQWHTRCGI*ELREYL
Trigger: CAAATACTCCCGAAGTTCCAAGATCCCACACCGGGT...ATGCCACTGAGATCTGCCCACTGCCATCCCAAGTGGGAACCGCAACACAGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp AAGGGCTCCTGCCTGCCTGGACACTGGTGGGAGGCGCTGTTTAGTTGGCTGTTTCGGACAGTAGGCGCCTaGTCTAAGCAACGATCAAAC +
Preference number: 5 (lower is better)
Translates to: KGSCLPGHWWEALFSWLFRTVGA*SKQRSN
Trigger: GTTTGATCGTTGCTTAGACAAGGCGCCTACTGTCCG...AAACAGCCAACTAAACAGCGCCTCCCACCAGTGTCCAGGCAGGCAGGAGCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp TGTCTGAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATGCCATCAGCAACATGGCAGGGTTTTCTaGGCCAGCAGGAACTGGCAC +
Preference number: 5 (lower is better)
Translates to: CLRVTHWRPGPGVGCHQQHGRVF*ASRNWH
Trigger: GTGCCAGTTCCTGCTGGCCAAGAAAACCCTGCCATG...TTGCTGATGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp AGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTGACATGGGCCTGGCTTaGGGCAGCAACCTCTGCAAT +
Preference number: 5 (lower is better)
Translates to: RRCLVGCFQRGLSEGPPADMGLA*GSNLCN
Trigger: ATTGCAGAGGTTGCTGCCCAAAGCCAGGCCCATGTC...AGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp CTTCTCGGGGGTGCTGATGGCCCGCTTGGTCACGTGCTCAATCTCGCCATTCGACCTTCAATTTTCTCTTaGGCTGACGACGGAGTCCGT +
Preference number: 5 (lower is better)
Translates to: LLGGADGPLGHVLNLAIRPSIFS*ADDGVR
Trigger: ACGGACTCCGTCGTCAGCCAAAGAGAAAATTGAAGG...TCGAATGGCGAGATTGAGCACGTGACCAAGCGGGCCATCAGCACCCCCGAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS CCA 90 bp CCGAGTCGTTCCTGTGGACCAATCACAACGTACAGAATTTCCCACTaGCCAACCACCGCGCCGAGCCGTTTCCATTCGCTCAACCAATCA +
Preference number: 5 (lower is better)
Translates to: PSRSCGPITTYRISH*PTTAPSRFHSLNQS
Trigger: TGATTGGTTGAGCGAATGGAAACGGCTCGGCGCGGTGGTTGGCCAGTGGGAAATTCTGTACGTTGTGATTGGTCCACAGGAACGACTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525964.6
ENST00000526422.2
ENST00000534532.6
CDS CCA 90 bp GTATTATTCTGCTGTAGTCCAGCCTGGGTGAGGAGCCAGCAATCTTaGAGAGCAGCATCCAGGCAGGTGCCGAATGTTCCGTGCCAGTGT +
Preference number: 5 (lower is better)
Translates to: VLFCCSPAWVRSQQS*RAASRQVPNVPCQC
Trigger: ACACTGGCACGGAACATTCGGCACCTGCCTGGATGCTGCTCTCCAAGATTGCTGGCTCCTCACCCAGGCTGGACTACAGCAGAATAATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525964.6
ENST00000534532.6
ENST00000534548.7
CDS CCA 90 bp AGCAGACACAGACAGGCTCCGCAGCCCCTGACACAGTCCCATGGCTaGGCTTACTTAAGACAACAGCTACACACAGAACGATGTCAAGCC +
Preference number: 5 (lower is better)
Translates to: SRHRQAPQPLTQSHG*AYLRQQLHTERCQA
Trigger: GGCTTGACATCGTTCTGTGTGTAGCTGTTGTCTTAAGTAAGCCCAGCCATGGGACTGTGTCAGGGGCTGCGGAGCCTGTCTGTGTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534290.1
CDS-3UTR CAA 90 bp GTTCCTCTTTGCCACAGAGAAAGCACCCAGACGCCACAGGCTCTGTCGCATTTCTTACTCACGTGGCCCTaGCTTCATCCAGCACAGCTC +
Preference number: 5 (lower is better)
Translates to: VPLCHRESTQTPQALSHFLLTWP*LHPAQL
Trigger: GAGCTGTGCTGGATGAAGCAAGGGCCACGTGAGTAA...GAAATGCGACAGAGCCTGTGGCGTCTGGGTGCTTTCTCTGTGGCAAAGAGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp GGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGCTCATTGCCAAAAGCTaGATCTCCTTTGAGCTGAGG +
Preference number: 5 (lower is better)
Translates to: GVFRRDLLLQAGVSLFLALIAKS*ISFELR
Trigger: CCTCAGCTCAAAGGAGATCAAGCTTTTGGCAATGAG...CGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp CAGCCGTCCCGGCCACATCTGCATGTTTTGCTAGCTCCTGCTCCTGGACCAGCTCTCATTGCCAAAAGCTaGATCTCCTTTGAGCTGAGG +
Preference number: 5 (lower is better)
Translates to: QPSRPHLHVLLAPAPGPALIAKS*ISFELR
Trigger: CCTCAGCTCAAAGGAGATCAAGCTTTTGGCAATGAG...AGCTGGTCCAGGAGCAGGAGCTAGCAAAACATGCAGATGTGGCCGGGACGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp TCGTGTTCCACAGCAAAGCGCTGCCCAAGGACTGCGGGAAGTGATCCAGCTGCCTCTGATGCCAGCTGTTaGTCAACTGCAAAGAAGTCC +
Preference number: 5 (lower is better)
Translates to: SCSTAKRCPRTAGSDPAASDASC*STAKKS
Trigger: GGACTTCTTTGCAGTTGACAAACAGCTGGCATCAGA...GGCAGCTGGATCACTTCCCGCAGTCCTTGGGCAGCGCTTTGCTGTGGAACACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534532.6
ENST00000534548.7
CDS-3UTR CAA 90 bp TGGTGGGAGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCCCACATCTGCATGTTTaGCTAGCTCCTGCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: WWEALFSWLFSEGSFGGTPHLHV*LAPAPG
Trigger: TCCAGGAGCAGGAGCTAGCAAAACATGCAGATGTGG...GGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCTCCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp AAGGGCTCCTGCCTGCCTGGACACTGGTGGGAGGCGCTGTTTAGTTGGCTGTTTTCTACAGTTGATGACTaGGGAGGTAACAGCAAGGGG +
Preference number: 5 (lower is better)
Translates to: KGSCLPGHWWEALFSWLFSTVDD*GGNSKG
Trigger: CCCCTTGCTGTTACCTCCCAAGTCATCAACTGTAGA...AAACAGCCAACTAAACAGCGCCTCCCACCAGTGTCCAGGCAGGCAGGAGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp CAGCCGTCCCGGCCACATCTGCATGTTTTGCTAGCTCCTGCTCCTGGACCAGCTGCCTGGTTTCTACAGTaGATGACTTGGGAGGTAACA +
Preference number: 5 (lower is better)
Translates to: QPSRPHLHVLLAPAPGPAAWFLQ*MTWEVT
Trigger: TGTTACCTCCCAAGTCATCAACTGTAGAAACCAGGC...AGCTGGTCCAGGAGCAGGAGCTAGCAAAACATGCAGATGTGGCCGGGACGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp GTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTACCACTGCTGTCTATGTaGATCTCCCCTGAGGGTTCG +
Preference number: 5 (lower is better)
Translates to: VFRGVFRRDLLLQAGVSLPLLSM*ISPEGS
Trigger: CGAACCCTCAGGGGAGATCAACATAGACAGCAGTGG...TAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp TGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATTCCACTGCTGAGCTGGGATGCTCTTCTTaGCCAGATCCTCGTGCTGTA +
Preference number: 5 (lower is better)
Translates to: CRLECLYSWRETAHSTAELGCSS*PDPRAV
Trigger: TACAGCACGAGGATCTGGCAAAGAAGAGCATCCCAG...CTCAGCAGTGGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp ATGGAGTGGCGGCCAGTCCAGCCTTTTAAAGAACGTCAGGTGGAGCAGCCAGGTCTGGGATGCTCTTCTTaGCCAGATCCTCGTGCTGTA +
Preference number: 5 (lower is better)
Translates to: MEWRPVQPFKERQVEQPGLGCSS*PDPRAV
Trigger: TACAGCACGAGGATCTGGCAAAGAAGAGCATCCCAG...ACCTGGCTGCTCCACCTGACGTTCTTTAAAAGGCTGGACTGGCCGCCACTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp TCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATTCCACTACAATGATGACGTTGTaGCGGACAGCCACGTCCTCA +
Preference number: 5 (lower is better)
Translates to: SCCRLECLYSWRETAHSTTMMTL*RTATSS
Trigger: TGAGGACGTGGCTGTCCGCAACAACGTCATCATTGT...AGTGGAATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp GCTCAGGGACATGGGCCTGGCTTTGGGCAGCAACCTCTGCAATGGCCCTGTTTCTCTGACTGGGGGAACTaGTTGTACTTCTCATGCTTC +
Preference number: 5 (lower is better)
Translates to: AQGHGPGFGQQPLQWPCFSDWGN*LYFSCF
Trigger: GAAGCATGAGAAGTACAACAAGTTCCCCCAGTCAGA...GAAACAGGGCCATTGCAGAGGTTGCTGCCCAAAGCCAGGCCCATGTCCCTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp CGAGGCCGATACGAGGCTGTGATTCTGCCTTTGGATGGATGTTGCTGTACACAGGACATGGGCCTGGCTTaGGGCAGCAACCTCTGCAAT +
Preference number: 5 (lower is better)
Translates to: RGRYEAVILPLDGCCCTQDMGLA*GSNLCN
Trigger: ATTGCAGAGGTTGCTGCCCAAAGCCAGGCCCATGTC...CTGTGTACAGCAACATCCATCCAAAGGCAGAATCACAGCCTCGTATCGGCCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp GCTGTTCCCCCATCATGGGAGCAGCCCTTAACAGAGGGCTGCACAAATCGGCAGCCTTCAATTTTCTCTTaGGCTGACGACGGAGTCCGT +
Preference number: 5 (lower is better)
Translates to: AVPPSWEQPLTEGCTNRQPSIFS*ADDGVR
Trigger: ACGGACTCCGTCGTCAGCCAAAGAGAAAATTGAAGG...CTGCCGATTTGTGCAGCCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS GCA 90 bp TCCTTTGCCCTCGTCAGGCGACATTTCGCGTGCGTGTCAAAGGGCTaGCTTTCCCGTCAGCACTCGAACAGCGTAATATCCGAATGTGAA +
Preference number: 5 (lower is better)
Translates to: SFALVRRHFACVSKG*LSRQHSNSVISECE
Trigger: TTCACATTCGGATATTACGCTGTTCGAGTGCTGACGGGAAAGGCAGCCCTTTGACACGCACGCGAAATGTCGCCTGACGAGGGCAAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525485.5
CDS GCA 90 bp ACCTTTGCCCTCGTCAGGCGACATTTCGCGTGCGTGTCAAAGGGCTaGCTTTCCCGTCAGCACTCGAACAGCGTAATATCCGAATGTGAA +
Preference number: 5 (lower is better)
Translates to: TFALVRRHFACVSKG*LSRQHSNSVISECE
Trigger: TTCACATTCGGATATTACGCTGTTCGAGTGCTGACGGGAAAGGCAGCCCTTTGACACGCACGCGAAATGTCGCCTGACGAGGGCAAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526422.2
ENST00000534532.6
CDS GCA 90 bp AGCTCTCGCACCAGGGCTGGGATGCTCTTCTTTGCCAGATCCTCGTaGTGTAAGCACAGCTTACCTGGCACAGAAGACAGGAAGATGTCT +
Preference number: 5 (lower is better)
Translates to: SSRTRAGMLFFARSS*CKHSLPGTEDRKMS
Trigger: AGACATCTTCCTGTCTTCTGTGCCAGGTAAGCTGTGCTTACAGCACGAGGATCTGGCAAAGAAGAGCATCCCAGCCCTGGTGCGAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530396.1
CDS-3UTR CAA 90 bp CGACTCCGATGCCTGCTCTTTGACTCCACGGCTTTCTTGACAGAATTCAGGATTGTGCTGATGGCCCGCTaGGTCACGTGCTCAATCTCG +
Preference number: 5 (lower is better)
Translates to: RLRCLLFDSTAFLTEFRIVLMAR*VTCSIS
Trigger: CGAGATTGAGCACGTGACCAAGCGGGCCATCAGCAC...AATCCTGAATTCTGTCAAGAAAGCCGTGGAGTCAAAGAGCAGGCATCGGAGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp CCTCCAGCCGTCCCGGCCACATCTGCATGTTTTGCTAGCTCCTGCTCCTGGACCTGGTATGTATTTTGCTaGGTTAAGAGCTCTGGCTTG +
Preference number: 5 (lower is better)
Translates to: PPAVPATSACFASSCSWTWYVFC*VKSSGL
Trigger: CAAGCCAGAGCTCTTAACCAAGCAAAATACATACCA...GGTCCAGGAGCAGGAGCTAGCAAAACATGCAGATGTGGCCGGGACGGCTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp AATTCAGGATTGCAATGGTGCTCAGGGACATGGGCCTGGCTTTGGGCAGCAACCACCCGGTGTGGGATCTaGGAACTTCGGGAGTATTTG +
Preference number: 5 (lower is better)
Translates to: NSGLQWCSGTWAWLWAATTRCGI*ELREYL
Trigger: CAAATACTCCCGAAGTTCCAAGATCCCACACCGGGT...GGTTGCTGCCCAAAGCCAGGCCCATGTCCCTGAGCACCATTGCAATCCTGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp CCTCCAGCCGTCCCGGCCACATCTGCATGTTTTGCTAGCTCCTGCTCCTGGACCTATGTCCTAAGGTGTTaGAATTGGGATTCTGCTGAC +
Preference number: 5 (lower is better)
Translates to: PPAVPATSACFASSCSWTYVLRC*NWDSAD
Trigger: GTCAGCAGAATCCCAATTCAAACACCTTAGGACATA...GGTCCAGGAGCAGGAGCTAGCAAAACATGCAGATGTGGCCGGGACGGCTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp GATGGCCCGCTTGGTCACGTGCTCAATCTCGCCATTCGACTCTTGCTCCAAACTACAGCATCAGTCACTTaGTCCCGGGTGCTCTTAGGA +
Preference number: 5 (lower is better)
Translates to: DGPLGHVLNLAIRLLLQTTASVT*SRVLLG
Trigger: TCCTAAGAGCACCCGGGACAAAGTGACTGATGCTGT...AGTTTGGAGCAAGAGTCGAATGGCGAGATTGAGCACGTGACCAAGCGGGCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp CAGCCGTCCCGGCCACATCTGCATGTTTTGCTAGCTCCTGCTCCTGGACCAGCTCCATTCAGCTTACACTaGACAGCATCAGTCACTTTG +
Preference number: 5 (lower is better)
Translates to: QPSRPHLHVLLAPAPGPAPFSLH*TASVTL
Trigger: CAAAGTGACTGATGCTGTCAAGTGTAAGCTGAATGG...AGCTGGTCCAGGAGCAGGAGCTAGCAAAACATGCAGATGTGGCCGGGACGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp GAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATGCCATCAGCAAAGCACCCTGTTCCATTCTCCTaGAGAACGATGTTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: ESNSLASRSRGRMPSAKHPVPFS*RTMLER
Trigger: CCTCTCCAACATCGTTCTCAAGGAGAATGGAACAGG...GTGCTTTGCTGATGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp GTTCCTCTTTGCCACAGAGAAAGCACCCAGACGCCACAGGCTCTGTCGCATTTCACAATGATGACGTTGTaGCGGACAGCCACGTCCTCA +
Preference number: 5 (lower is better)
Translates to: VPLCHRESTQTPQALSHFTMMTL*RTATSS
Trigger: TGAGGACGTGGCTGTCCGCAACAACGTCATCATTGT...GAAATGCGACAGAGCCTGTGGCGTCTGGGTGCTTTCTCTGTGGCAAAGAGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp AAACGTGACATCACTGATGCTCTTCTCGGGGGTGCTGATGGCCCGCTTGGTCACATTACAATGATGACGTaGTTGCGGACAGCCACGTCC +
Preference number: 5 (lower is better)
Translates to: KRDITDALLGGADGPLGHITMMT*LRTATS
Trigger: GGACGTGGCTGTCCGCAACAACGTCATCATTGTAAT...GTGACCAAGCGGGCCATCAGCACCCCCGAGAAGAGCATCAGTGATGTCACGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp GGTGGGAGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTATTACAATGATGACGTaGTTGCGGACAGCCACGTCC +
Preference number: 5 (lower is better)
Translates to: GGRRCLVGCFQRGLSEGPITMMT*LRTATS
Trigger: GGACGTGGCTGTCCGCAACAACGTCATCATTGTAAT...AGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCTCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp TCGTGTTCCACAGCAAAGCGCTGCCCAAGGACTGCGGGAAGTGATCCAGCTGCCGCTCTTACGTTGGGTTaGTCTCTTCTTCCTAGCATT +
Preference number: 5 (lower is better)
Translates to: SCSTAKRCPRTAGSDPAAALTLG*SLLPSI
Trigger: AATGCTAGGAAGAAGAGACAAACCCAACGTAAGAGC...GGCAGCTGGATCACTTCCCGCAGTCCTTGGGCAGCGCTTTGCTGTGGAACACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp CCCACTAGTGCTAACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCTCCCACTGTTCCTCTTaGCCACAGAGAAAGCACCCA +
Preference number: 5 (lower is better)
Translates to: PTSANRRDSSCSPIMGAASHCSS*PQRKHP
Trigger: TGGGTGCTTTCTCTGTGGCAAAGAGGAACAGTGGGA...GGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTTAGCACTAGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS GCA 90 bp ATCAGTTACTCACTCTCGGGGGTGCTGATGGCCCGCTTGGTCACGTaGTCAATCTCGCCATTCGACTCTTGCTCCAAACTGTATGAAGAC +
Preference number: 5 (lower is better)
Translates to: ISYSLSGVLMARLVT*SISPFDSCSKLYED
Trigger: GTCTTCATACAGTTTGGAGCAAGAGTCGAATGGCGAGATTGAGCACGTGACCAAGCGGGCCATCAGCACCCCCGAGAGTGAGTAACTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525432.1
CDS GCA 90 bp ACGTGTCTGAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATaGCATCAGCAAAGCACGCTGAGAGACAGAGAGAGAGAAAAACGT +
Preference number: 5 (lower is better)
Translates to: TCLRVTHWRPGPGVG*HQQSTLRDREREKR
Trigger: ACGTTTTTCTCTCTCTCTGTCTCTCAGCGTGCTTTGCTGATGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTCAGACACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527944.1
CDS-3UTR CAA 90 bp ATGGAGTGGCGGCCAGTCCAGCCTTTTAAAGAACGTCAGGTGGAGCAGCCAGGTGACTCCACGGCTTTCTaGACAGAATTCAGGATTGCA +
Preference number: 5 (lower is better)
Translates to: MEWRPVQPFKERQVEQPGDSTAF*TEFRIA
Trigger: TGCAATCCTGAATTCTGTCAAGAAAGCCGTGGAGTC...ACCTGGCTGCTCCACCTGACGTTCTTTAAAAGGCTGGACTGGCCGCCACTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp GGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGCGGGAGACCGCACATGTTAAGAGCTCTGGCTaGTGTAACATGACATTCATG +
Preference number: 5 (lower is better)
Translates to: GTSCCRLECLYSWRETAHVKSSG*CNMTFM
Trigger: CATGAATGTCATGTTACACAAGCCAGAGCTCTTAAC...ATGTGCGGTCTCCCGCCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp AACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCCTTAACAGAGGGCCACATCTGCATGTTTaGCTAGCTCCTGCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: NRRDSSCSPIMGAALNRGPHLHV*LAPAPG
Trigger: TCCAGGAGCAGGAGCTAGCAAAACATGCAGATGTGG...CCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp GTTCCTCTTTGCCACAGAGAAAGCACCCAGACGCCACAGGCTCTGTCGCATTTCTCTACAGTTGATGACTaGGGAGGTAACAGCAAGGGG +
Preference number: 5 (lower is better)
Translates to: VPLCHRESTQTPQALSHFSTVDD*GGNSKG
Trigger: CCCCTTGCTGTTACCTCCCAAGTCATCAACTGTAGA...GAAATGCGACAGAGCCTGTGGCGTCTGGGTGCTTTCTCTGTGGCAAAGAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp GGGAGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGATTTATCTACCACCTaGGCACAGATGTGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: GRRCLVGCFQRGLSEGPPDLSTT*AQMCCS
Trigger: ACTGCAGCACATCTGTGCCAAGGTGGTAGATAAATC...AGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp GAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATGCCATCAGCAAAGCACGATTTATCTACCACCTaGGCACAGATGTGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: ESNSLASRSRGRMPSAKHDLSTT*AQMCCS
Trigger: ACTGCAGCACATCTGTGCCAAGGTGGTAGATAAATC...GTGCTTTGCTGATGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp CGACTCCGATGCCTGCTCTTTGACTCCACGGCTTTCTTGACAGAATTCAGGATTTCCTTGAGAACGATGTaGGAGAGGCGGTGCTCGCAG +
Preference number: 5 (lower is better)
Translates to: RLRCLLFDSTAFLTEFRISLRTM*ERRCSQ
Trigger: CTGCGAGCACCGCCTCTCCAACATCGTTCTCAAGGA...AATCCTGAATTCTGTCAAGAAAGCCGTGGAGTCAAAGAGCAGGCATCGGAGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp CCCACTAGTGCTAACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCATTACAATGATGACGTaGTTGCGGACAGCCACGTCC +
Preference number: 5 (lower is better)
Translates to: PTSANRRDSSCSPIMGAAITMMT*LRTATS
Trigger: GGACGTGGCTGTCCGCAACAACGTCATCATTGTAAT...GGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTTAGCACTAGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp GGGAGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTTCCTCCTGCAAGAGATaGGTAAGCAAGATGAGTGTC +
Preference number: 5 (lower is better)
Translates to: GRRCLVGCFQRGLSEGPPSSCKR*VSKMSV
Trigger: GACACTCATCTTGCTTACCAATCTCTTGCAGGAGGA...AGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp TGGCGGCCAGTCCAGCCTTTTAAAGAACGTCAGGTGGAGCAGCCAGGTGAAAGGTCTGACTGGGGGAACTaGTTGTACTTCTCATGCTTC +
Preference number: 5 (lower is better)
Translates to: WRPVQPFKERQVEQPGERSDWGN*LYFSCF
Trigger: GAAGCATGAGAAGTACAACAAGTTCCCCCAGTCAGA...CCTTTCACCTGGCTGCTCCACCTGACGTTCTTTAAAAGGCTGGACTGGCCGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp AGGTCCAGGGGTAGGATGCCATCAGCAAAGCACGCCAAAATACTAAGGCAGATTCATGGCAGGGTTTTCTaGGCCAGCAGGAACTGGCAC +
Preference number: 5 (lower is better)
Translates to: RSRGRMPSAKHAKILRQIHGRVF*ASRNWH
Trigger: GTGCCAGTTCCTGCTGGCCAAGAAAACCCTGCCATG...AATCTGCCTTAGTATTTTGGCGTGCTTTGCTGATGGCATCCTACCCCTGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp TGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCCCTTCAATTTTCTCTTaGGCTGACGACGGAGTCCGT +
Preference number: 5 (lower is better)
Translates to: CLVGCFQRGLSEGPPAAGPSIFS*ADDGVR
Trigger: ACGGACTCCGTCGTCAGCCAAAGAGAAAATTGAAGG...GCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS TCA 90 bp GATTTTCTCCCAAGATTGTATTATTCTGCTGTAGTCCAGCCTGGGTaGGGAGCCAGCAATCTTGGAGAGCAGCATCCAGGCAGGTGCCGA +
Preference number: 5 (lower is better)
Translates to: DFLPRLYYSAVVQPG*GASNLGEQHPGRCR
Trigger: TCGGCACCTGCCTGGATGCTGCTCTCCAAGATTGCTGGCTCCTCACCCAGGCTGGACTACAGCAGAATAATACAATCTTGGGAGAAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525964.6
ENST00000534532.6
ENST00000534548.7
CDS GCA 90 bp GACAGGGGTCTTCCTGCAGTGCCAGGGTCTCCCTTACTAGAGGCCTaGTGGGCCATTATCAACACAGCATTTCATTTGCAAACACACACA +
Preference number: 5 (lower is better)
Translates to: DRGLPAVPGSPLLEA*WAIINTAFHLQTHT
Trigger: TGTGTGTGTTTGCAAATGAAATGCTGTGTTGATAATGGCCCAGCAGGCCTCTAGTAAGGGAGACCCTGGCACTGCAGGAAGACCCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527944.1
CDS-3UTR CAA 90 bp AAAGTCGTTCTGCAAAAGTGTGGGGGATGGGCTGGCACAGTTAACATCAGAAAGTCCTGGGTTGGTGGCTaGGATGGTGCCATTAGCAGG +
Preference number: 5 (lower is better)
Translates to: KVVLQKCGGWAGTVNIRKSWVGG*DGAISR
Trigger: CCTGCTAATGGCACCATCCAAGCCACCAACCCAGGA...CTTTCTGATGTTAACTGTGCCAGCCCATCCCCCACACTTTTGCAGAACGACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526422.2
CDS-3UTR CAA 90 bp GAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTATTCCTGGGTTAAGAGCTCTGGCTaGTGTAACATGACATTCATG +
Preference number: 5 (lower is better)
Translates to: EGSFGGTSCCRLECLYSWVKSSG*CNMTFM
Trigger: CATGAATGTCATGTTACACAAGCCAGAGCTCTTAAC...CCAGGAATAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp GTTCCTCTTTGCCACAGAGAAAGCACCCAGACGCCACAGGCTCTGTCGCATTTCCTCATTGCCAAAAGCTaGATCTCCTTTGAGCTGAGG +
Preference number: 5 (lower is better)
Translates to: VPLCHRESTQTPQALSHFLIAKS*ISFELR
Trigger: CCTCAGCTCAAAGGAGATCAAGCTTTTGGCAATGAG...GAAATGCGACAGAGCCTGTGGCGTCTGGGTGCTTTCTCTGTGGCAAAGAGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp AGTGCTAACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCCTTAACACAGCATCAGTCACTTaGTCCCGGGTGCTCTTAGGA +
Preference number: 5 (lower is better)
Translates to: SANRRDSSCSPIMGAALNTASVT*SRVLLG
Trigger: TCCTAAGAGCACCCGGGACAAAGTGACTGATGCTGT...GTTAAGGGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTTAGCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp CTTGGGCCCTGGCAGTGGCTGTGTCCCAGTGAGCTTTACTCACGTGGCCCTTGCTTCATTCGTCTCTCTTaGTTTGACTTTCCCTTCAAT +
Preference number: 5 (lower is better)
Translates to: LGPWQWLCPSELYSRGPCFIRLS*FDFPFN
Trigger: ATTGAAGGGAAAGTCAAACAAAGAGAGACGAATGAA...GCAAGGGCCACGTGAGTAAAGCTCACTGGGACACAGCCACTGCCAGGGCCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp CTTGGGCCCTGGCAGTGGCTGTGTCCCAGTGAGCTTTACTCACGTGGCCCTTGCAACAGAAAAATCCTATaGACTACTGGAAGGCTGTAT +
Preference number: 5 (lower is better)
Translates to: LGPWQWLCPSELYSRGPCNRKIL*TTGRLY
Trigger: ATACAGCCTTCCAGTAGTCAATAGGATTTTTCTGTT...GCAAGGGCCACGTGAGTAAAGCTCACTGGGACACAGCCACTGCCAGGGCCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp GTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTGCAGGCTGGAGTGTCTTTACCATTCAGCTTACACTaGACAGCATCAGTCACTTTG +
Preference number: 5 (lower is better)
Translates to: VFRGVFRRDLLLQAGVSLPFSLH*TASVTL
Trigger: CAAAGTGACTGATGCTGTCAAGTGTAAGCTGAATGG...TAAAGACACTCCAGCCTGCAGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp CCCACTAGTGCTAACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCCCATTCAGCTTACACTaGACAGCATCAGTCACTTTG +
Preference number: 5 (lower is better)
Translates to: PTSANRRDSSCSPIMGAAPFSLH*TASVTL
Trigger: CAAAGTGACTGATGCTGTCAAGTGTAAGCTGAATGG...GGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTTAGCACTAGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp AACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCCTTAACAGAGGGTCCTCCTGCAAGAGATaGGTAAGCAAGATGAGTGTC +
Preference number: 5 (lower is better)
Translates to: NRRDSSCSPIMGAALNRGSSCKR*VSKMSV
Trigger: GACACTCATCTTGCTTACCAATCTCTTGCAGGAGGA...CCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp GCTGTTCCCCCATCATGGGAGCAGCCCTTAACAGAGGGCTGCACAAATCGGCAGACATTCAATGAAGTGTaGGAAGAACATGACAGGGTT +
Preference number: 5 (lower is better)
Translates to: AVPPSWEQPLTEGCTNRQTFNEV*EEHDRV
Trigger: AACCCTGTCATGTTCTTCCAACACTTCATTGAATGT...CTGCCGATTTGTGCAGCCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp CAGCCGTCCCGGCCACATCTGCATGTTTTGCTAGCTCCTGCTCCTGGACCAGCTTTCGTCTCTCTTTGTTaGACTTTCCCTTCAATGAAA +
Preference number: 5 (lower is better)
Translates to: QPSRPHLHVLLAPAPGPAFVSLC*TFPSMK
Trigger: TTTCATTGAAGGGAAAGTCAAACAAAGAGAGACGAA...AGCTGGTCCAGGAGCAGGAGCTAGCAAAACATGCAGATGTGGCCGGGACGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR CAA 90 bp AACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCCTTAACAGAGGGGCCTTTGGATGGATGTaGCTGTACACAGATGCTACA +
Preference number: 5 (lower is better)
Translates to: NRRDSSCSPIMGAALNRGAFGWM*LYTDAT
Trigger: TGTAGCATCTGTGTACAGCAACATCCATCCAAAGGC...CCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS TCA 90 bp ATGCCATCAGCAAAGCACGCTGAGAGACAGAGAGAGAGAAAAACGTaGGCTTCTGAGAAATGCTCTGGCCCAGAGAGGAGGTGTAATTCC +
Preference number: 5 (lower is better)
Translates to: MPSAKHAERQRERKT*ASEKCSGPERRCNS
Trigger: GGAATTACACCTCCTCTCTGGGCCAGAGCATTTCTCAGAAGCTCACGTTTTTCTCTCTCTCTGTCTCTCAGCGTGCTTTGCTGATGGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527944.1
CDS CCA 90 bp AGGGGTCTTCCTGCAGTGCCAGGGTCTCCCTTACTAGAGGCCTGCTaGGCCATTATCAACACAGCATTTCATTTGCAAACACACACATTT +
Preference number: 5 (lower is better)
Translates to: RGLPAVPGSPLLEAC*AIINTAFHLQTHTF
Trigger: AAATGTGTGTGTTTGCAAATGAAATGCTGTGTTGATAATGGCCCAGCAGGCCTCTAGTAAGGGAGACCCTGGCACTGCAGGAAGACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527944.1
CDS-3UTR CAA 90 bp TGTCTGAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATGCCATCAGCAATGGTATGTATTTTGCTaGGTTAAGAGCTCTGGCTTG +
Preference number: 5 (lower is better)
Translates to: CLRVTHWRPGPGVGCHQQWYVFC*VKSSGL
Trigger: CAAGCCAGAGCTCTTAACCAAGCAAAATACATACCA...TTGCTGATGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp GAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATGCCATCAGCAAAGCACTCCATAAGGAGGTCTTaGTCTGGTTTAGATCTCATT +
Preference number: 5 (lower is better)
Translates to: ESNSLASRSRGRMPSAKHSIRRS*SGLDLI
Trigger: AATGAGATCTAAACCAGACAAAGACCTCCTTATGGA...GTGCTTTGCTGATGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp ACTGGTGTCTTCCATGTAGCGTCCCAGCTTTGGGCTCCTGTAACAGACCTCTTTTCTGATGCCAGCTGTTaGTCAACTGCAAAGAAGTCC +
Preference number: 5 (lower is better)
Translates to: TGVFHVASQLWAPVTDLFSDASC*STAKKS
Trigger: GGACTTCTTTGCAGTTGACAAACAGCTGGCATCAGA...AAAGAGGTCTGTTACAGGAGCCCAAAGCTGGGACGCTACATGGAAGACACCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp CACTGTTCCTCTTTGCCACAGAGAAAGCACCCAGACGCCACAGGCTCTGTCGCAGTACTATGGGAAACATaGTTCTCAATGAAGAAGGTC +
Preference number: 5 (lower is better)
Translates to: HCSSLPQRKHPDATGSVAVLWET*FSMKKV
Trigger: GACCTTCTTCATTGAGAACAATGTTTCCCATAGTAC...TGCGACAGAGCCTGTGGCGTCTGGGTGCTTTCTCTGTGGCAAAGAGGAACAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp CGACTCCGATGCCTGCTCTTTGACTCCACGGCTTTCTTGACAGAATTCAGGATTTCTACAGTTGATGACTaGGGAGGTAACAGCAAGGGG +
Preference number: 5 (lower is better)
Translates to: RLRCLLFDSTAFLTEFRISTVDD*GGNSKG
Trigger: CCCCTTGCTGTTACCTCCCAAGTCATCAACTGTAGA...AATCCTGAATTCTGTCAAGAAAGCCGTGGAGTCAAAGAGCAGGCATCGGAGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp AGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGGTTGTCATAGTGATAGGGTAGCCTGGTTTCTACAGTaGATGACTTGGGAGGTAACA +
Preference number: 5 (lower is better)
Translates to: SVGDSRSSLLLGCHSDRVAWFLQ*MTWEVT
Trigger: TGTTACCTCCCAAGTCATCAACTGTAGAAACCAGGC...TACCCTATCACTATGACAACCAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp ATTGGTAAGCAAGATGAGTGTCTGCTTCCGGATGAATGGGTCGGAATCCTTCAGCTGGGATGCTCTTCTTaGCCAGATCCTCGTGCTGTA +
Preference number: 5 (lower is better)
Translates to: IGKQDECLLPDEWVGILQLGCSS*PDPRAV
Trigger: TACAGCACGAGGATCTGGCAAAGAAGAGCATCCCAG...CTGAAGGATTCCGACCCATTCATCCGGAAGCAGACACTCATCTTGCTTACCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR CAA 90 bp CTCTTTGACTCCACGGCTTTCTTGACAGAATTCAGGATTGCAATGGTGCTCAGGACAATGATGACGTTGTaGCGGACAGCCACGTCCTCA +
Preference number: 5 (lower is better)
Translates to: LFDSTAFLTEFRIAMVLRTMMTL*RTATSS
Trigger: TGAGGACGTGGCTGTCCGCAACAACGTCATCATTGT...CCTGAGCACCATTGCAATCCTGAATTCTGTCAAGAAAGCCGTGGAGTCAAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp CCCTCAGCGTTGGGGATTCACGCTCCAGCCTCCTTCTTGGTTGTCATAGTGATAAGACACATGGAGATGTaGGGAATATACTTGTCCACC +
Preference number: 5 (lower is better)
Translates to: PSALGIHAPASFLVVIVIRHMEM*GIYLST
Trigger: GGTGGACAAGTATATTCCCAACATCTCCATGTGTCT...TATCACTATGACAACCAAGAAGGAGGCTGGAGCGTGAATCCCCAACGCTGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp ACGGCTTTCTTGACAGAATTCAGGATTGCAATGGTGCTCAGGGACATGGGCCTGTCCTCCTGCAAGAGATaGGTAAGCAAGATGAGTGTC +
Preference number: 5 (lower is better)
Translates to: TAFLTEFRIAMVLRDMGLSSCKR*VSKMSV
Trigger: GACACTCATCTTGCTTACCAATCTCTTGCAGGAGGA...CAGGCCCATGTCCCTGAGCACCATTGCAATCCTGAATTCTGTCAAGAAAGCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp GAGAGTAACTCACTGGCGTCCAGGTCCAGGGGTAGGATGCCATCAGCAAAGCACACATTCAATGAAGTGTaGGAAGAACATGACAGGGTT +
Preference number: 5 (lower is better)
Translates to: ESNSLASRSRGRMPSAKHTFNEV*EEHDRV
Trigger: AACCCTGTCATGTTCTTCCAACACTTCATTGAATGT...GTGCTTTGCTGATGGCATCCTACCCCTGGACCTGGACGCCAGTGAGTTACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp GGGAGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTACATTCAATGAAGTGTaGGAAGAACATGACAGGGTT +
Preference number: 5 (lower is better)
Translates to: GRRCLVGCFQRGLSEGPPTFNEV*EEHDRV
Trigger: AACCCTGTCATGTTCTTCCAACACTTCATTGAATGT...AGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp GGCAGCACTCCTAAGCTCCGACTCCGATGCCTGCTCTTTGACTCCACGGCTTTCTTCATTCGTCTCTCTTaGTTTGACTTTCCCTTCAAT +
Preference number: 5 (lower is better)
Translates to: GSTPKLRLRCLLFDSTAFFIRLS*FDFPFN
Trigger: ATTGAAGGGAAAGTCAAACAAAGAGAGACGAATGAA...GAAAGCCGTGGAGTCAAAGAGCAGGCATCGGAGTCGGAGCTTAGGAGTGCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS TCA 90 bp AAACGTGACATCACTGATGCTCTCTGCATAAAGAGGAGACACCACTaGGTGAAAGCCGCGTGGTCTATCGGAGGTCTCTGTTCTAGTTGT +
Preference number: 5 (lower is better)
Translates to: KRDITDALCIKRRHH*VKAAWSIGGLCSSC
Trigger: ACAACTAGAACAGAGACCTCCGATAGACCACGCGGCTTTCACTCAGTGGTGTCTCCTCTTTATGCAGAGAGCATCAGTGATGTCACGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526787.2
CDS GCA 90 bp ATGGTTCTGACCATCAGAACTATCCTGCACCGGAAGGAGTTTTACTaGGACTCTAGCAAACACATCACGAATGCAGGAGAGACTGAGGAG +
Preference number: 5 (lower is better)
Translates to: MVLTIRTILHRKEFY*DSSKHITNAGETEE
Trigger: CTCCTCAGTCTCTCCTGCATTCGTGATGTGTTTGCTAGAGTCGCAGTAAAACTCCTTCCGGTGCAGGATAGTTCTGATGGTCAGAACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525432.1
CDS CCA 90 bp GCGTATTCCCCACAAGGAAGTTTACTGAGCAGCTGGACTAGGGACTaGGCTGCAAAAGTACGATACTCTGATTTATCTACCACCTTGGCA +
Preference number: 5 (lower is better)
Translates to: AYSPQGSLLSSWTRD*AAKVRYSDLSTTLA
Trigger: TGCCAAGGTGGTAGATAAATCAGAGTATCGTACTTTTGCAGCCCAGTCCCTAGTCCAGCTGCTCAGTAAACTTCCTTGTGGGGAATACGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525964.6
ENST00000534532.6
ENST00000534548.7
CDS-3UTR CAA 90 bp AATTCAGGATTGCAATGGTGCTCAGGGACATGGGCCTGGCTTTGGGCAGCAACCTCCATAAGGAGGTCTTaGTCTGGTTTAGATCTCATT +
Preference number: 5 (lower is better)
Translates to: NSGLQWCSGTWAWLWAATSIRRS*SGLDLI
Trigger: AATGAGATCTAAACCAGACAAAGACCTCCTTATGGA...GGTTGCTGCCCAAAGCCAGGCCCATGTCCCTGAGCACCATTGCAATCCTGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp AGGTCCAGGGGTAGGATGCCATCAGCAAAGCACGCCAAAATACTAAGGCAGATTTCTGATGCCAGCTGTTaGTCAACTGCAAAGAAGTCC +
Preference number: 5 (lower is better)
Translates to: RSRGRMPSAKHAKILRQISDASC*STAKKS
Trigger: GGACTTCTTTGCAGTTGACAAACAGCTGGCATCAGA...AATCTGCCTTAGTATTTTGGCGTGCTTTGCTGATGGCATCCTACCCCTGGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp AGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGCTGTACTATGGGAAACATaGTTCTCAATGAAGAAGGTC +
Preference number: 5 (lower is better)
Translates to: RRCLVGCFQRGLSEGPPAVLWET*FSMKKV
Trigger: GACCTTCTTCATTGAGAACAATGTTTCCCATAGTAC...AGCAGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp GGGAGGCGCTGTTTAGTTGGCTGTTTTCAGAGGGGTCTTTCGGAGGGACCTCCTGATTTTCTCCCAAGATaGTATTATTCTGCTGTAGTC +
Preference number: 5 (lower is better)
Translates to: GRRCLVGCFQRGLSEGPPDFLPR*YYSAVV
Trigger: GACTACAGCAGAATAATACAATCTTGGGAGAAAATC...AGGAGGTCCCTCCGAAAGACCCCTCTGAAAACAGCCAACTAAACAGCGCCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp AACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCCTTAACAGAGGGTATGTCCTAAGGTGTTaGAATTGGGATTCTGCTGAC +
Preference number: 5 (lower is better)
Translates to: NRRDSSCSPIMGAALNRGYVLRC*NWDSAD
Trigger: GTCAGCAGAATCCCAATTCAAACACCTTAGGACATA...CCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp CTGGGATGCTCTTCTTTGCCAGATCCTCGTGCTGTAAGCACAGCTTACCTAAGGAGACACATGGAGATGTaGGGAATATACTTGTCCACC +
Preference number: 5 (lower is better)
Translates to: LGCSSLPDPRAVSTAYLRRHMEM*GIYLST
Trigger: GGTGGACAAGTATATTCCCAACATCTCCATGTGTCT...CCTTAGGTAAGCTGTGCTTACAGCACGAGGATCTGGCAAAGAAGAGCATCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR CAA 90 bp AGGTCCAGGGGTAGGATGCCATCAGCAAAGCACGCCAAAATACTAAGGCAGATTTCTGACTGGGGGAACTaGTTGTACTTCTCATGCTTC +
Preference number: 5 (lower is better)
Translates to: RSRGRMPSAKHAKILRQISDWGN*LYFSCF
Trigger: GAAGCATGAGAAGTACAACAAGTTCCCCCAGTCAGA...AATCTGCCTTAGTATTTTGGCGTGCTTTGCTGATGGCATCCTACCCCTGGACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS TCA 90 bp CTCTGCAAGGCGTCAACAGCTGAACTGATCACCTCTAGAGACCACTaGAATCCATTCAGCTTACACTTGACAGCATCAGTCACTTTGTCC +
Preference number: 5 (lower is better)
Translates to: LCKASTAELITSRDH*NPFSLHLTASVTLS
Trigger: GGACAAAGTGACTGATGCTGTCAAGTGTAAGCTGAATGGATTTCAGTGGTCTCTAGAGGTGATCAGTTCAGCTGTTGACGCCTTGCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525964.6
ENST00000534532.6
ENST00000534548.7
CDS-3UTR CAA 90 bp GATTGTCTAAGGCCAAAGGCAATTGCGAAATCAAGTCTGTCAAGTACAATAACACGCTCTAGCTCACTGTaGCCTCGCTGTCTGCCAGGA +
Preference number: 5 (lower is better)
Translates to: DCLRPKAIAKSSLSSTITRSSSL*PRCLPG
Trigger: TCCTGGCAGACAGCGAGGCAACAGTGAGCTAGAGCG...TGTTATTGTACTTGACAGACTTGATTTCGCAATTGCCTTTGGCCTTAGACAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp GGCTGTTCTTTCTTTCTTTTCCGATTCAAGTTAGATTCCTGGGGCCAGCTCTTCGATGGCATTTCGAATTaGAGAAAGGTCCCGGGCAGA +
Preference number: 5 (lower is better)
Translates to: GCSFFLFRFKLDSWGQLFDGISN*RKVPGR
Trigger: TCTGCCCGGGACCTTTCTCAAATTCGAAATGCCATC...GAAGAGCTGGCCCCAGGAATCTAACTTGAATCGGAAAAGAAAGAAAGAACAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533155.5
CDS-3UTR CAA 90 bp AACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCCTTAACAGAGGGTCCATAAGGAGGTCTTaGTCTGGTTTAGATCTCATT +
Preference number: 5 (lower is better)
Translates to: NRRDSSCSPIMGAALNRGSIRRS*SGLDLI
Trigger: AATGAGATCTAAACCAGACAAAGACCTCCTTATGGA...CCCTCTGTTAAGGGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp AACATCACTCAGAAGCCTGTGTTCTTCAAGAGCAGGTGTTCTCAGCCTCACATGGATTTATCTACCACCTaGGCACAGATGTGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: NITQKPVFFKSRCSQPHMDLSTT*AQMCCS
Trigger: ACTGCAGCACATCTGTGCCAAGGTGGTAGATAAATC...CATGTGAGGCTGAGAACACCTGCTCTTGAAGAACACAGGCTTCTGAGTGATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp ACGGCTTTCTTGACAGAATTCAGGATTGCAATGGTGCTCAGGGACATGGGCCTGTATGTCCTAAGGTGTTaGAATTGGGATTCTGCTGAC +
Preference number: 5 (lower is better)
Translates to: TAFLTEFRIAMVLRDMGLYVLRC*NWDSAD
Trigger: GTCAGCAGAATCCCAATTCAAACACCTTAGGACATA...CAGGCCCATGTCCCTGAGCACCATTGCAATCCTGAATTCTGTCAAGAAAGCCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp GTTCCTCTTTGCCACAGAGAAAGCACCCAGACGCCACAGGCTCTGTCGCATTTCTTCGTCTCTCTTTGTTaGACTTTCCCTTCAATGAAA +
Preference number: 5 (lower is better)
Translates to: VPLCHRESTQTPQALSHFFVSLC*TFPSMK
Trigger: TTTCATTGAAGGGAAAGTCAAACAAAGAGAGACGAA...GAAATGCGACAGAGCCTGTGGCGTCTGGGTGCTTTCTCTGTGGCAAAGAGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp AGTGCTAACAGAAGAGACTCAAGCTGTTCCCCCATCATGGGAGCAGCCCTTAACGTAACAGACCTCTTTTaGGTTATGGATGGCTCACAA +
Preference number: 5 (lower is better)
Translates to: SANRRDSSCSPIMGAALNVTDLF*VMDGSQ
Trigger: TTGTGAGCCATCCATAACCAAAAAGAGGTCTGTTAC...GTTAAGGGCTGCTCCCATGATGGGGGAACAGCTTGAGTCTCTTCTGTTAGCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS GCA 90 bp CACTTGACAGCATCAGTCACTTTGTCCCGGGTGCTCTTAGGAAGATaGTTTGCAATATGCCCAATCACACAGAGAATATGTCCTAAGGTG +
Preference number: 5 (lower is better)
Translates to: HLTASVTLSRVLLGR*FAICPITQRICPKV
Trigger: CACCTTAGGACATATTCTCTGTGTGATTGGGCATATTGCAAAGCATCTTCCTAAGAGCACCCGGGACAAAGTGACTGATGCTGTCAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525964.6
ENST00000534532.6
ENST00000534548.7
CDS-3UTR CAA 90 bp AAAAGCTTGATCTCCTTTGAGCTGAGGACCTCAAACGTGTCTGAGAGTAACTCAGATGGCATTTCGAATTaGAGAAAGGTCCCGGGCAGA +
Preference number: 5 (lower is better)
Translates to: KSLISFELRTSNVSESNSDGISN*RKVPGR
Trigger: TCTGCCCGGGACCTTTCTCAAATTCGAAATGCCATC...TGAGTTACTCTCAGACACGTTTGAGGTCCTCAGCTCAAAGGAGATCAAGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp ATGACTACATTTGCCAAGGCCATGTCATCTTCTTCCATAAGGAGGTCTTTGTCTACCCGGTGTGGGATCTaGGAACTTCGGGAGTATTTG +
Preference number: 5 (lower is better)
Translates to: MTTFAKAMSSSSIRRSLSTRCGI*ELREYL
Trigger: CAAATACTCCCGAAGTTCCAAGATCCCACACCGGGT...AGACAAAGACCTCCTTATGGAAGAAGATGACATGGCCTTGGCAAATGTAGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp AAAAGCTTGATCTCCTTTGAGCTGAGGACCTCAAACGTGTCTGAGAGTAACTCAGCAGACTTCCTAACGTaGGTCTTCTCATCCCTGATC +
Preference number: 5 (lower is better)
Translates to: KSLISFELRTSNVSESNSADFLT*VFSSLI
Trigger: GATCAGGGATGAGAAGACCAACGTTAGGAAGTCTGC...TGAGTTACTCTCAGACACGTTTGAGGTCCTCAGCTCAAAGGAGATCAAGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp CGAGGCCGATACGAGGCTGTGATTCTGCCTTTGGATGGATGTTGCTGTACACAGGATTTTCTCCCAAGATaGTATTATTCTGCTGTAGTC +
Preference number: 5 (lower is better)
Translates to: RGRYEAVILPLDGCCCTQDFLPR*YYSAVV
Trigger: GACTACAGCAGAATAATACAATCTTGGGAGAAAATC...CTGTGTACAGCAACATCCATCCAAAGGCAGAATCACAGCCTCGTATCGGCCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp TCGTGCTGTAAGCACAGCTTACCTAAGGTAATGATGGCATGTGCTCTAATCACAGACTCCACGGCTTTCTaGACAGAATTCAGGATTGCA +
Preference number: 5 (lower is better)
Translates to: SCCKHSLPKVMMACALITDSTAF*TEFRIA
Trigger: TGCAATCCTGAATTCTGTCAAGAAAGCCGTGGAGTC...TGTGATTAGAGCACATGCCATCATTACCTTAGGTAAGCTGTGCTTACAGCACGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS-3UTR CAA 90 bp AAAGTCGTTCTGCAAAAGTGTGGGGGATGGGCTGGCACAGTTAACATCAGAAAGAAAATACTCCTGCAATaGCTCGAGGCTATGATGAAG +
Preference number: 5 (lower is better)
Translates to: KVVLQKCGGWAGTVNIRKKILLQ*LEAMMK
Trigger: CTTCATCATAGCCTCGAGCAATTGCAGGAGTATTTT...CTTTCTGATGTTAACTGTGCCAGCCCATCCCCCACACTTTTGCAGAACGACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526422.2
CDS GCA 90 bp TTCATAGAGTTTTGTGAATGCAGCCAATCCAGTCTCTATGATCTCTaGTTCTATGCTGGGATCCAAAGGCTCAGTCTCTGTGAAATCCAG +
Preference number: 5 (lower is better)
Translates to: FIEFCECSQSSLYDL*FYAGIQRLSLCEIQ
Trigger: CTGGATTTCACAGAGACTGAGCCTTTGGATCCCAGCATAGAAGCAGAGATCATAGAGACTGGATTGGCTGCATTCACAAAACTCTATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525485.5
ENST00000525964.6
ENST00000533155.5
ENST00000534532.6
ENST00000534548.7
CDS GCA 90 bp TCAGTCACTTTGTCCCGGGTGCTCTTAGGAAGATGCTTTGCAATATaGCCAATCACACAGAGAATATGTCCTAAGGTGTTTGAATTGGGA +
Preference number: 5 (lower is better)
Translates to: SVTLSRVLLGRCFAI*PITQRICPKVFELG
Trigger: TCCCAATTCAAACACCTTAGGACATATTCTCTGTGTGATTGGGCATATTGCAAAGCATCTTCCTAAGAGCACCCGGGACAAAGTGACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525964.6
ENST00000534532.6
ENST00000534548.7
CDS-3UTR CAA 90 bp AAAAGCTTGATCTCCTTTGAGCTGAGGACCTCAAACGTGTCTGAGAGTAACTCAAGACACATGGAGATGTaGGGAATATACTTGTCCACC +
Preference number: 5 (lower is better)
Translates to: KSLISFELRTSNVSESNSRHMEM*GIYLST
Trigger: GGTGGACAAGTATATTCCCAACATCTCCATGTGTCT...TGAGTTACTCTCAGACACGTTTGAGGTCCTCAGCTCAAAGGAGATCAAGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp CTCTTTGACTCCACGGCTTTCTTGACAGAATTCAGGATTGCAATGGTGCTCAGGGCTGCAGTTTTAAAGTaGTGTTCCTTAAAGACCAGA +
Preference number: 5 (lower is better)
Translates to: LFDSTAFLTEFRIAMVLRAAVLK*CSLKTR
Trigger: TCTGGTCTTTAAGGAACACAACTTTAAAACTGCAGC...CCTGAGCACCATTGCAATCCTGAATTCTGTCAAGAAAGCCGTGGAGTCAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534532.6
CDS TCA 90 bp TCAAACATAATTTCCTGCACCAGGAACTTATGCTTTAAGAACTTCTaGTGCTCCAAGGAGAGGGTGTTATCCACCTCTCTTTCAGGCAGT +
Preference number: 5 (lower is better)
Translates to: SNIISCTRNLCFKNF*CSKERVLSTSLSGS
Trigger: ACTGCCTGAAAGAGAGGTGGATAACACCCTCTCCTTGGAGCATCAGAAGTTCTTAAAGCATAAGTTCCTGGTGCAGGAAATTATGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525964.6
ENST00000534532.6
ENST00000534548.7
CDS TCA 90 bp TTGGAGAGCAGCATCCAGGCAGGTGCCGAATGTTCCGTGCCAGTGTaGGATATTACATTGTTTATAAAAGTGGGTGAGAATTTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: LESSIQAGAECSVPV*DITLFIKVGENFSF
Trigger: GAAAGAAAAATTCTCACCCACTTTTATAAACAATGTAATATCTCACACTGGCACGGAACATTCGGCACCTGCCTGGATGCTGCTCTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525964.6
ENST00000534532.6
ENST00000534548.7
CDS-3UTR CAA 90 bp GATTGTCTAAGGCCAAAGGCAATTGCGAAATCAAGTCTGTCAAGTACAATAACACCTCTCAGGTTAGCTTaGAACTGCCTCTTCCTGAGA +
Preference number: 5 (lower is better)
Translates to: DCLRPKAIAKSSLSSTITPLRLA*NCLFLR
Trigger: TCTCAGGAAGAGGCAGTTCAAAGCTAACCTGAGAGG...TGTTATTGTACTTGACAGACTTGATTTCGCAATTGCCTTTGGCCTTAGACAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp ATCAGCAAAGCACGCCAAAATACTAAGGCAGATTTTGGAAGTGATGTTGAATCGGCCTGGTTTCTACAGTaGATGACTTGGGAGGTAACA +
Preference number: 5 (lower is better)
Translates to: ISKARQNTKADFGSDVESAWFLQ*MTWEVT
Trigger: TGTTACCTCCCAAGTCATCAACTGTAGAAACCAGGC...CGATTCAACATCACTTCCAAAATCTGCCTTAGTATTTTGGCGTGCTTTGCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp GCAGTGATAAACATAAGATGTCATTTCCTTGACTCCGGCCTTCAATTTTCTCTTGCAGACTTCCTAACGTaGGTCTTCTCATCCCTGATC +
Preference number: 5 (lower is better)
Translates to: AVINIRCHFLDSGLQFSLADFLT*VFSSLI
Trigger: GATCAGGGATGAGAAGACCAACGTTAGGAAGTCTGC...AAGAGAAAATTGAAGGCCGGAGTCAAGGAAATGACATCTTATGTTTATCACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp GATTGTCTAAGGCCAAAGGCAATTGCGAAATCAAGTCTGTCAAGTACAATAACAGCAGACTTCCTAACGTaGGTCTTCTCATCCCTGATC +
Preference number: 5 (lower is better)
Translates to: DCLRPKAIAKSSLSSTITADFLT*VFSSLI
Trigger: GATCAGGGATGAGAAGACCAACGTTAGGAAGTCTGC...TGTTATTGTACTTGACAGACTTGATTTCGCAATTGCCTTTGGCCTTAGACAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp AATGGGAGAGCACAGCAAATACAATCCATAATAAGCCAGTTCTGGTATGTATTTCACTGGGTGGAATACTaGATTGGCTACACTGCCTCC +
Preference number: 5 (lower is better)
Translates to: NGRAQQIQSIISQFWYVFHWVEY*IGYTAS
Trigger: GGAGGCAGTGTAGCCAATCAAGTATTCCACCCAGTG...AAATACATACCAGAACTGGCTTATTATGGATTGTATTTGCTGTGCTCTCCCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533155.5
CDS-3UTR CAA 90 bp CTTCATTCTTTGTTATTTGCTCTTACGTTGGGTTTGTCTCTTCTTCCTAGCATTCCTGTTCCATTCTCCTaGAGAACGATGTTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: LHSLLFALTLGLSLLPSIPVPFS*RTMLER
Trigger: CCTCTCCAACATCGTTCTCAAGGAGAATGGAACAGG...AATGCTAGGAAGAAGAGACAAACCCAACGTAAGAGCAAATAACAAAGAATGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp TTCATTCTTTGTTATTTGCTCTTACGTTGGGTTTGTCTCTTCTTCCTAGCATTTGATAGGGTAGCCTTATaGCCCCCTCTTCTTATACCC +
Preference number: 5 (lower is better)
Translates to: FILCYLLLRWVCLFFLAFDRVAL*PPLLIP
Trigger: GGGTATAAGAAGAGGGGGCAATAAGGCTACCCTATC...AAATGCTAGGAAGAAGAGACAAACCCAACGTAAGAGCAAATAACAAAGAATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp CATAAGGAGGTCTTTGTCTGGTTTAGATCTCATTGCCAAAAGCTTGATCTCCTTGTACTATGGGAAACATaGTTCTCAATGAAGAAGGTC +
Preference number: 5 (lower is better)
Translates to: HKEVFVWFRSHCQKLDLLVLWET*FSMKKV
Trigger: GACCTTCTTCATTGAGAACAATGTTTCCCATAGTAC...AAGGAGATCAAGCTTTTGGCAATGAGATCTAAACCAGACAAAGACCTCCTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp CTTCATTCTTTGTTATTTGCTCTTACGTTGGGTTTGTCTCTTCTTCCTAGCATTGTTAAGAGCTCTGGCTaGTGTAACATGACATTCATG +
Preference number: 5 (lower is better)
Translates to: LHSLLFALTLGLSLLPSIVKSSG*CNMTFM
Trigger: CATGAATGTCATGTTACACAAGCCAGAGCTCTTAAC...AATGCTAGGAAGAAGAGACAAACCCAACGTAAGAGCAAATAACAAAGAATGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp AGAGCACAGCAAATACAATCCATAATAAGCCAGTTCTGGTATGTATTTTGCTTGTGGTATGTATTTTGCTaGGTTAAGAGCTCTGGCTTG +
Preference number: 5 (lower is better)
Translates to: RAQQIQSIISQFWYVFCLWYVFC*VKSSGL
Trigger: CAAGCCAGAGCTCTTAACCAAGCAAAATACATACCA...CAAGCAAAATACATACCAGAACTGGCTTATTATGGATTGTATTTGCTGTGCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533155.5
CDS-3UTR CAA 90 bp CATAAGGAGGTCTTTGTCTGGTTTAGATCTCATTGCCAAAAGCTTGATCTCCTTGATTTTCTCCCAAGATaGTATTATTCTGCTGTAGTC +
Preference number: 5 (lower is better)
Translates to: HKEVFVWFRSHCQKLDLLDFLPR*YYSAVV
Trigger: GACTACAGCAGAATAATACAATCTTGGGAGAAAATC...AAGGAGATCAAGCTTTTGGCAATGAGATCTAAACCAGACAAAGACCTCCTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525964.6
ENST00000534532.6
CDS-3UTR CAA 90 bp GATTGTCTAAGGCCAAAGGCAATTGCGAAATCAAGTCTGTCAAGTACAATAACAGCTGCAGTTTTAAAGTaGTGTTCCTTAAAGACCAGA +
Preference number: 5 (lower is better)
Translates to: DCLRPKAIAKSSLSSTITAAVLK*CSLKTR
Trigger: TCTGGTCTTTAAGGAACACAACTTTAAAACTGCAGC...TGTTATTGTACTTGACAGACTTGATTTCGCAATTGCCTTTGGCCTTAGACAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534548.7
CDS-3UTR CAA 90 bp ATACAATCCATAATAAGCCAGTTCTGGTATGTATTTTGCTTGGTTAAGAGCTCTGTTAAGAGCTCTGGCTaGTGTAACATGACATTCATG +
Preference number: 5 (lower is better)
Translates to: IQSIISQFWYVFCLVKSSVKSSG*CNMTFM
Trigger: CATGAATGTCATGTTACACAAGCCAGAGCTCTTAAC...AGAGCTCTTAACCAAGCAAAATACATACCAGAACTGGCTTATTATGGATTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533155.5
CDS TCA 72 bp CCTCCCCCAGCGCCGACAGCCGGCCGGGGAGCAGGGTaGTTCAGGGCCCAGCTCCTCCGGCGAGGCCTGTCA +
Preference number: 6 (lower is better)
Translates to: PPPAPTAGRGAG*FRAQLLRRGLS
Trigger: TGACAGGCCTCGCCGGAGGAGCTGGGCCCTGAATCACCCTGCTCCCCGGCCGGCTGTCGGCGCTGGGGGAGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532445.1
ENST00000534227.5
CDS TCA 72 bp GCTGCAGGCCGCTACCAAGGCCCCGCAACGCCACCATaGTCCCAGGGCACCGGCTCGCCGCCGCCGTGCTCA +
Preference number: 6 (lower is better)
Translates to: AAGRYQGPATPP*SQGTGSPPPCS
Trigger: TGAGCACGGCGGCGGCGAGCCGGTGCCCTGGGATCATGGTGGCGTTGCGGGGCCTTGGTAGCGGCCTGCAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000525485.5
ENST00000525964.6
ENST00000526422.2
ENST00000532445.1
ENST00000534227.5
ENST00000534532.6
ENST00000534548.7
CDS GCA 72 bp GCGCCGAGTCGTTCCGAGACCCGCCCGGCCCGGCGGTaGGATGAGCTTCTTCGGCTTCGGGCAGAGCGTGGA +
Preference number: 6 (lower is better)
Translates to: APSRSETRPARR*DELLRLRAERG
Trigger: TCCACGCTCTGCCCGAAGCCGAAGAAGCTCATCGCACCGCCGGGCCGGGCGGGTCTCGGAACGACTCGGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532445.1
ENST00000534227.5
CDS TCA 72 bp GAGTCGTTCCGAGACCCGCCCGGCCCGGCGGTGCGATaGGCTTCTTCGGCTTCGGGCAGAGCGTGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: ESFRDPPGPAVR*ASSASGRAWRW
Trigger: CCACCTCCACGCTCTGCCCGAAGCCGAAGAAGCTCATCGCACCGCCGGGCCGGGCGGGTCTCGGAACGACTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532445.1
ENST00000534227.5
CDS CCA 72 bp ACATCAGTGTCCCAGCGGCGGCCCTCAGACCTCCACTaGACCCTGTCCCAGGGCCTGGCAGTGTTGAGGGCC +
Preference number: 6 (lower is better)
Translates to: TSVSQRRPSDLH*TLSQGLAVLRA
Trigger: GGCCCTCAACACTGCCAGGCCCTGGGACAGGGTCCAGTGGAGGTCTGAGGGCCGCCGCTGGGACACTGATGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526787.2
CDS CCA 72 bp GACAACTGCAGTTCTGTAGGGACTGCGCGGCACGCGTaGGCCCAGAGCCTGTCCCAGCGAGGTAGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: DNCSSVGTARHA*AQSLSQRGSSC
Trigger: GCAGCTGCTACCTCGCTGGGACAGGCTCTGGGCCCACGCGTGCCGCGCAGTCCCTACAGAACTGCAGTTGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525485.5
ENST00000526422.2
ENST00000534532.6
CDS GCA 72 bp GTGGAACCGAGTCTAAGATCCAGCGGACACCAGGGCTaGAGGCCGCTACCAAGGCCCCGCAACGCCACCATG +
Preference number: 6 (lower is better)
Translates to: VEPSLRSSGHQG*RPLPRPRNATM
Trigger: CATGGTGGCGTTGCGGGGCCTTGGTAGCGGCCTGCAGCCCTGGTGTCCGCTGGATCTTAGACTCGGTTCCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526422.2
ENST00000532445.1
CDS GCA 72 bp TCCGAGAAGACAAGACAACTGCAGTTCTGTAGGGACTaGGCGGCACGCGTGGGCCCAGAGCCTGTCCCAGCG +
Preference number: 6 (lower is better)
Translates to: SEKTRQLQFCRD*AARVGPEPVPA
Trigger: CGCTGGGACAGGCTCTGGGCCCACGCGTGCCGCGCAGTCCCTACAGAACTGCAGTTGTCTTGTCTTCTCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525485.5
ENST00000526422.2
ENST00000534532.6
CDS GCA 72 bp ACCCATTCGAGTCTAAGATCCAGCGGACACCAGGGCTaGAGGCCGCTACCAAGGCCCCGCAACGCCACCATG +
Preference number: 6 (lower is better)
Translates to: THSSLRSSGHQG*RPLPRPRNATM
Trigger: CATGGTGGCGTTGCGGGGCCTTGGTAGCGGCCTGCAGCCCTGGTGTCCGCTGGATCTTAGACTCGAATGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000525485.5
ENST00000525964.6
ENST00000533155.5
ENST00000534227.5
ENST00000534532.6
ENST00000534548.7
CDS GCA 72 bp CTACGACGGGGAGACGGTCTCCGGGAAGGTGAGCCTTaGCCTCAAGAACCCCAACAAGCGGCTGGAGCACCA +
Preference number: 6 (lower is better)
Translates to: LRRGDGLREGEP*PQEPQQAAGAP
Trigger: TGGTGCTCCAGCCGCTTGTTGGGGTTCTTGAGGGCAAGGCTCACCTTCCCGGAGACCGTCTCCCCGTCGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532445.1
ENST00000534227.5
CDS CCA 72 bp CCGCCGCACGCTCAGAGAACTGGGCGGGCCGAAAAGTaGAAGCCAAACAAGGCTCCTGCGGGTGTTCCGCTA +
Preference number: 6 (lower is better)
Translates to: PPHAQRTGRAEK*KPNKAPAGVPL
Trigger: TAGCGGAACACCCGCAGGAGCCTTGTTTGGCTTCCACTTTTCGGCCCGCCCAGTTCTCTGAGCGTGCGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525964.6
ENST00000526422.2
ENST00000534532.6
CDS CCA 72 bp CAATCACCGGCGTCGTCCGCCGCACGCTCAGAGAACTaGGCGGGCCGAAAAGTGGAAGCCAAACAAGGCTCC +
Preference number: 6 (lower is better)
Translates to: QSPASSAARSEN*AGRKVEAKQGS
Trigger: GGAGCCTTGTTTGGCTTCCACTTTTCGGCCCGCCCAGTTCTCTGAGCGTGCGGCGGACGACGCCGGTGATTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525964.6
ENST00000526422.2
ENST00000534532.6
CDS TCA 72 bp CTGCACCTCCACGCGTGCCTGCTGGTTTCCAGCCAGTaGCTGGAGCATGCGCGCTGGAAATATGGCACCGTG +
Preference number: 6 (lower is better)
Translates to: LHLHACLLVSSQ*LEHARWKYGTV
Trigger: CACGGTGCCATATTTCCAGCGCGCATGCTCCAGTCACTGGCTGGAAACCAGCAGGCACGCGTGGAGGTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526787.2
CDS TCA 72 bp CCCTCCCGCCGTCTTCCATCATTGCCCCTGTCCCGGTaGCCGCCCTGTCCCACTTACTACACCTCCTACTGT +
Preference number: 6 (lower is better)
Translates to: PSRRLPSLPLSR*PPCPTYYTSYC
Trigger: ACAGTAGGAGGTGTAGTAAGTGGGACAGGGCGGTCACCGGGACAGGGGCAATGATGGAAGACGGCGGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526787.2
CDS TCA 72 bp TCCTCTTCTACGACGGGGAGACGGTCTCCGGGAAGGTaGGCCTTGCCCTCAAGAACCCCAACAAGCGGCTGG +
Preference number: 6 (lower is better)
Translates to: SSSTTGRRSPGR*ALPSRTPTSGW
Trigger: CCAGCCGCTTGTTGGGGTTCTTGAGGGCAAGGCTCACCTTCCCGGAGACCGTCTCCCCGTCGTAGAAGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532445.1
ENST00000534227.5
CDS GCA 72 bp CGCGTGCCTGCTGGTTTCCAGCCAGTGACTGGAGCATaGGCGCTGGAAATATGGCACCGTGAGCAGCTCCTC +
Preference number: 6 (lower is better)
Translates to: RVPAGFQPVTGA*ALEIWHREQLL
Trigger: GAGGAGCTGCTCACGGTGCCATATTTCCAGCGCGCATGCTCCAGTCACTGGCTGGAAACCAGCAGGCACGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526787.2
CDS CCA 72 bp AAAGCTCGCTCCCGCGCGCGCGCCGAGTCGTTCCTGTaGACCAATCACAACGTACAGAATTTCCCACTGGCC +
Preference number: 6 (lower is better)
Translates to: KARSRARAESFL*TNHNVQNFPLA
Trigger: GGCCAGTGGGAAATTCTGTACGTTGTGATTGGTCCACAGGAACGACTCGGCGCGCGCGCGGGAGCGAGCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525964.6
ENST00000526422.2
ENST00000534532.6
CDS TCA 72 bp TCGGCTTCGGGCAGAGCGTGGAGGTGGAAATCCTTCTaGACGATGCAGAGAGTAGGAAGCGGGCCGAGCACA +
Preference number: 6 (lower is better)
Translates to: SASGRAWRWKSF*TMQRVGSGPST
Trigger: TGTGCTCGGCCCGCTTCCTACTCTCTGCATCGTTCAGAAGGATTTCCACCTCCACGCTCTGCCCGAAGCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532445.1
ENST00000534227.5
CDS GCA 72 bp CCCAGATTCCCTGAGGACACTTCAACTCCTTGCCTCTaGACCTCCACGCGTGCCTGCTGGTTTCCAGCCAGT +
Preference number: 6 (lower is better)
Translates to: PRFPEDTSTPCL*TSTRACWFPAS
Trigger: ACTGGCTGGAAACCAGCAGGCACGCGTGGAGGTGCAGAGGCAAGGAGTTGAAGTGTCCTCAGGGAATCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526787.2
CDS GCA 72 bp AGTCGTTCCTTTGCCCTCGTCAGGCGACATTTCGCGTaGGTGTCAAAGGGCTGCCTTTCCCGTCAGCACTCG +
Preference number: 6 (lower is better)
Translates to: SRSFALVRRHFA*VSKGCLSRQHS
Trigger: CGAGTGCTGACGGGAAAGGCAGCCCTTTGACACGCACGCGAAATGTCGCCTGACGAGGGCAAAGGAACGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525485.5
CDS GCA 72 bp ACTGTCACCTTTGCCCTCGTCAGGCGACATTTCGCGTaGGTGTCAAAGGGCTGCCTTTCCCGTCAGCACTCG +
Preference number: 6 (lower is better)
Translates to: TVTFALVRRHFA*VSKGCLSRQHS
Trigger: CGAGTGCTGACGGGAAAGGCAGCCCTTTGACACGCACGCGAAATGTCGCCTGACGAGGGCAAAGGTGACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526422.2
ENST00000534532.6
CDS CCA 72 bp TGCTGTAGTCCAGCCTGGGTGAGGAGCCAGCAATCTTaGAGAGCAGCATCCAGGCAGGTGCCGAATGTTCCG +
Preference number: 6 (lower is better)
Translates to: CCSPAWVRSQQS*RAASRQVPNVP
Trigger: CGGAACATTCGGCACCTGCCTGGATGCTGCTCTCCAAGATTGCTGGCTCCTCACCCAGGCTGGACTACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525964.6
ENST00000534532.6
ENST00000534548.7
CDS CAA 90 bp CCTCACACACCTCGAGCTCTCGCACCAGGGCTGGGATGCTCTTCTTaGCCAGATCCTCGTGCTGTAAGCACAGCTTACCTGGCACAGAAG +
Preference number: 6 (lower is better)
Translates to: PHTPRALAPGLGCSS*PDPRAVSTAYLAQK
Trigger: CTTCTGTGCCAGGTAAGCTGTGCTTACAGCACGAGGATCTGGCAAAGAAGAGCATCCCAGCCCTGGTGCGAGAGCTCGAGGTGTGTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530396.1
CDS TCA 72 bp CACGTGTTCCGATCAGTTACTCACTCTCGGGGGTGCTaGTGGCCCGCTTGGTCACGTGCTCAATCTCGCCAT +
Preference number: 6 (lower is better)
Translates to: HVFRSVTHSRGC*WPAWSRAQSRH
Trigger: ATGGCGAGATTGAGCACGTGACCAAGCGGGCCATCAGCACCCCCGAGAGTGAGTAACTGATCGGAACACGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525432.1
CDS GCA 72 bp TCACTCTCGGGGGTGCTGATGGCCCGCTTGGTCACGTaGTCAATCTCGCCATTCGACTCTTGCTCCAAACTG +
Preference number: 6 (lower is better)
Translates to: SLSGVLMARLVT*SISPFDSCSKL
Trigger: CAGTTTGGAGCAAGAGTCGAATGGCGAGATTGAGCACGTGACCAAGCGGGCCATCAGCACCCCCGAGAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525432.1
CDS GCA 72 bp AAAGTAGCCGAAAGCACTCCGAGAAGACAAGACAACTaGAGTTCTGTAGGGACTGCGCGGCACGCGTGGGCC +
Preference number: 6 (lower is better)
Translates to: KVAESTPRRQDN*SSVGTARHAWA
Trigger: GGCCCACGCGTGCCGCGCAGTCCCTACAGAACTGCAGTTGTCTTGTCTTCTCGGAGTGCTTTCGGCTACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525485.5
ENST00000526422.2
ENST00000534532.6
CDS GCA 72 bp TGGGCGGGCCGAAAAGTGGAAGCCAAACAAGGCTCCTaGGGGTGTTCCGCTAATTCGTTCGAGAAGGAGCCA +
Preference number: 6 (lower is better)
Translates to: WAGRKVEAKQGS*GCSANSFEKEP
Trigger: TGGCTCCTTCTCGAACGAATTAGCGGAACACCCGCAGGAGCCTTGTTTGGCTTCCACTTTTCGGCCCGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525964.6
ENST00000526422.2
ENST00000534532.6
CDS CCA 72 bp GCGTGGTCTATCGGAGGTCTCTGTTCTAGTTGTCCGTaGGACGTAGGCAGGGTGTCCACATCAGTGTCCCAG +
Preference number: 6 (lower is better)
Translates to: AWSIGGLCSSCP*DVGRVSTSVSQ
Trigger: CTGGGACACTGATGTGGACACCCTGCCTACGTCCCACGGACAACTAGAACAGAGACCTCCGATAGACCACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526787.2
CDS CAA 90 bp CGTGTTCCGATCAGTTACTCACTCTCGGGGGTGCTGATGGCCCGCTaGGTCACGTGCTCAATCTCGCCATTCGACTCTTGCTCCAAACTG +
Preference number: 6 (lower is better)
Translates to: RVPISYSLSGVLMAR*VTCSISPFDSCSKL
Trigger: CAGTTTGGAGCAAGAGTCGAATGGCGAGATTGAGCACGTGACCAAGCGGGCCATCAGCACCCCCGAGAGTGAGTAACTGATCGGAACACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525432.1
CDS TCA 72 bp CCCTCGCCCTTGATTGTTCATGGCACCTACCCGCAATaGACCCCCTCCAGTTTGCCCTCAGGAACAGGAGAA +
Preference number: 6 (lower is better)
Translates to: PSPLIVHGTYPQ*TPSSLPSGTGE
Trigger: TTCTCCTGTTCCTGAGGGCAAACTGGAGGGGGTTCATTGCGGGTAGGTGCCATGAACAATCAAGGGCGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526787.2
CDS TCA 72 bp AGTGACTGGAGCATGCGCGCTGGAAATATGGCACCGTaGGCAGCTCCTCCACATGGAATCAGCAGCCAAGTC +
Preference number: 6 (lower is better)
Translates to: SDWSMRAGNMAP*AAPPHGISSQV
Trigger: GACTTGGCTGCTGATTCCATGTGGAGGAGCTGCTCACGGTGCCATATTTCCAGCGCGCATGCTCCAGTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526787.2
CDS GCA 72 bp CTCGTCAGGCGACATTTCGCGTGCGTGTCAAAGGGCTaGCTTTCCCGTCAGCACTCGAACAGCGTAATATCC +
Preference number: 6 (lower is better)
Translates to: LVRRHFACVSKG*LSRQHSNSVIS
Trigger: GGATATTACGCTGTTCGAGTGCTGACGGGAAAGGCAGCCCTTTGACACGCACGCGAAATGTCGCCTGACGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525485.5
ENST00000526422.2
ENST00000534532.6
CDS CCA 72 bp CGCTGGAAATATGGCACCGTGAGCAGCTCCTCCACATaGAATCAGCAGCCAAGTCCTGTCCCTTCTACCTCC +
Preference number: 6 (lower is better)
Translates to: RWKYGTVSSSST*NQQPSPVPSTS
Trigger: GGAGGTAGAAGGGACAGGACTTGGCTGCTGATTCCATGTGGAGGAGCTGCTCACGGTGCCATATTTCCAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526787.2
CDS CCA 72 bp TCCTGTGGACCAATCACAACGTACAGAATTTCCCACTaGCCAACCACCGCGCCGAGCCGTTTCCATTCGCTC +
Preference number: 6 (lower is better)
Translates to: SCGPITTYRISH*PTTAPSRFHSL
Trigger: GAGCGAATGGAAACGGCTCGGCGCGGTGGTTGGCCAGTGGGAAATTCTGTACGTTGTGATTGGTCCACAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525964.6
ENST00000526422.2
ENST00000534532.6
CDS CAA 72 bp ATCAGTTACTCACTCTCGGGGGTGCTGATGGCCCGCTaGGTCACGTGCTCAATCTCGCCATTCGACTCTTGC +
Preference number: 6 (lower is better)
Translates to: ISYSLSGVLMAR*VTCSISPFDSC
Trigger: GCAAGAGTCGAATGGCGAGATTGAGCACGTGACCAAGCGGGCCATCAGCACCCCCGAGAGTGAGTAACTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525432.1
CDS GCA 72 bp CGACGGAGTCCGTGGTGTCCCGATGTAACTGACCCCTaGTCCAAACGTGACATCACTGATGCTCTCTGCATA +
Preference number: 6 (lower is better)
Translates to: RRSPWCPDVTDP*SKRDITDALCI
Trigger: TATGCAGAGAGCATCAGTGATGTCACGTTTGGAGCAGGGGTCAGTTACATCGGGACACCACGGACTCCGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526787.2
CDS GCA 72 bp ACCAGGGCTGGGATGCTCTTCTTTGCCAGATCCTCGTaGTGTAAGCACAGCTTACCTGGCACAGAAGACAGG +
Preference number: 6 (lower is better)
Translates to: TRAGMLFFARSS*CKHSLPGTEDR
Trigger: CCTGTCTTCTGTGCCAGGTAAGCTGTGCTTACAGCACGAGGATCTGGCAAAGAAGAGCATCCCAGCCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530396.1
CDS CCA 72 bp AGACAGGCTCCGCAGCCCCTGACACAGTCCCATGGCTaGGCTTACTTAAGACAACAGCTACACACAGAACGA +
Preference number: 6 (lower is better)
Translates to: RQAPQPLTQSHG*AYLRQQLHTER
Trigger: TCGTTCTGTGTGTAGCTGTTGTCTTAAGTAAGCCCAGCCATGGGACTGTGTCAGGGGCTGCGGAGCCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534290.1
CDS CCA 72 bp ACACAGACAGGCTCCGCAGCCCCTGACACAGTCCCATaGCTGGGCTTACTTAAGACAACAGCTACACACAGA +
Preference number: 6 (lower is better)
Translates to: TQTGSAAPDTVP*LGLLKTTATHR
Trigger: TCTGTGTGTAGCTGTTGTCTTAAGTAAGCCCAGCCATGGGACTGTGTCAGGGGCTGCGGAGCCTGTCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534290.1
CDS CAA 90 bp GCAATGAACCCCCTCCAGTTTGCCCTCAGGAACAGGAGAACACAGTaGAGCAGATTCCACCGCAGCTTGGGTGTGAATTCTGGCTCAGTG +
Preference number: 6 (lower is better)
Translates to: AMNPLQFALRNRRTQ*SRFHRSLGVNSGSV
Trigger: CACTGAGCCAGAATTCACACCCAAGCTGCGGTGGAATCTGCTCAACTGTGTTCTCCTGTTCCTGAGGGCAAACTGGAGGGGGTTCATTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526787.2
CDS TCA 72 bp GATGACTTCCTAGGCCCTGACTGCGCGCTGTACACATaGTTCTTTTTCCAACCAGTGCTGCTCCTCTGCTGG +
Preference number: 6 (lower is better)
Translates to: DDFLGPDCALYT*FFFQPVLLLCW
Trigger: CCAGCAGAGGAGCAGCACTGGTTGGAAAAAGAATCATGTGTACAGCGCGCAGTCAGGGCCTAGGAAGTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525964.6
CDS CAA 72 bp CCCCTCCAGTTTGCCCTCAGGAACAGGAGAACACAGTaGAGCAGATTCCACCGCAGCTTGGGTGTGAATTCT +
Preference number: 6 (lower is better)
Translates to: PLQFALRNRRTQ*SRFHRSLGVNS
Trigger: AGAATTCACACCCAAGCTGCGGTGGAATCTGCTCAACTGTGTTCTCCTGTTCCTGAGGGCAAACTGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526787.2
CDS GCA 72 bp CTTCCTGCAGTGCCAGGGTCTCCCTTACTAGAGGCCTaGTGGGCCATTATCAACACAGCATTTCATTTGCAA +
Preference number: 6 (lower is better)
Translates to: LPAVPGSPLLEA*WAIINTAFHLQ
Trigger: TTGCAAATGAAATGCTGTGTTGATAATGGCCCAGCAGGCCTCTAGTAAGGGAGACCCTGGCACTGCAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527944.1
CDS GCA 72 bp TCTGCTGGTGTCTCTGCAGATGCTCTACAAAGCCTCTaGAAGGCGTCAACAGCTGAACTGATCACCTCTAGA +
Preference number: 6 (lower is better)
Translates to: SAGVSADALQSL*KASTAELITSR
Trigger: TCTAGAGGTGATCAGTTCAGCTGTTGACGCCTTGCAGAGGCTTTGTAGAGCATCTGCAGAGACACCAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525964.6
ENST00000534532.6
ENST00000534548.7
CDS CCA 72 bp CCTGCAGTGCCAGGGTCTCCCTTACTAGAGGCCTGCTaGGCCATTATCAACACAGCATTTCATTTGCAAACA +
Preference number: 6 (lower is better)
Translates to: PAVPGSPLLEAC*AIINTAFHLQT
Trigger: TGTTTGCAAATGAAATGCTGTGTTGATAATGGCCCAGCAGGCCTCTAGTAAGGGAGACCCTGGCACTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527944.1
CDS CCA 72 bp TCTCCCAAGATTGTATTATTCTGCTGTAGTCCAGCCTaGGTGAGGAGCCAGCAATCTTGGAGAGCAGCATCC +
Preference number: 6 (lower is better)
Translates to: SPKIVLFCCSPA*VRSQQSWRAAS
Trigger: GGATGCTGCTCTCCAAGATTGCTGGCTCCTCACCCAGGCTGGACTACAGCAGAATAATACAATCTTGGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525964.6
ENST00000534532.6
ENST00000534548.7
CDS CAA 72 bp TCTCCAGATCCAACTGTTTCACCACTGCTGTCTATGTaGATCTCCCCTGAGGGTTCGGAACGGTTAGATGTC +
Preference number: 6 (lower is better)
Translates to: SPDPTVSPLLSM*ISPEGSERLDV
Trigger: GACATCTAACCGTTCCGAACCCTCAGGGGAGATCAACATAGACAGCAGTGGTGAAACAGTTGGATCTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525964.6
ENST00000534532.6
ENST00000534548.7
CDS CAA 90 bp ACACATCTTTCTCCAGATCCAACTGTTTCACCACTGCTGTCTATGTaGATCTCCCCTGAGGGTTCGGAACGGTTAGATGTCTGCCTTTGG +
Preference number: 6 (lower is better)
Translates to: THLSPDPTVSPLLSM*ISPEGSERLDVCLW
Trigger: CCAAAGGCAGACATCTAACCGTTCCGAACCCTCAGGGGAGATCAACATAGACAGCAGTGGTGAAACAGTTGGATCTGGAGAAAGATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525964.6
ENST00000534532.6
ENST00000534548.7
CDS TCA 72 bp AACTGTTTCACCACTGCTGTCTATGTTGATCTCCCCTaGGGGTTCGGAACGGTTAGATGTCTGCCTTTGGTA +
Preference number: 6 (lower is better)
Translates to: NCFTTAVYVDLP*GFGTVRCLPLV
Trigger: TACCAAAGGCAGACATCTAACCGTTCCGAACCCTCAGGGGAGATCAACATAGACAGCAGTGGTGAAACAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525964.6
ENST00000534532.6
ENST00000534548.7
CDS TCA 72 bp CTCTACAAAGCCTCTGCAAGGCGTCAACAGCTGAACTaGTCACCTCTAGAGACCACTGAAATCCATTCAGCT +
Preference number: 6 (lower is better)
Translates to: LYKASARRQQLN*SPLETTEIHSA
Trigger: AGCTGAATGGATTTCAGTGGTCTCTAGAGGTGATCAGTTCAGCTGTTGACGCCTTGCAGAGGCTTTGTAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525964.6
ENST00000534532.6
ENST00000534548.7
CDS GCA 72 bp ACCATCAGAACTATCCTGCACCGGAAGGAGTTTTACTaGGACTCTAGCAAACACATCACGAATGCAGGAGAG +
Preference number: 6 (lower is better)
Translates to: TIRTILHRKEFY*DSSKHITNAGE
Trigger: CTCTCCTGCATTCGTGATGTGTTTGCTAGAGTCGCAGTAAAACTCCTTCCGGTGCAGGATAGTTCTGATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525432.1
CDS CCA 72 bp AATTCATCCACAAGGGCGCTGATAAACTGGACCGCCTaGTTTCTACAGTTGATGACTTGGGAGGTAACAGCA +
Preference number: 6 (lower is better)
Translates to: NSSTRALINWTA*FLQLMTWEVTA
Trigger: TGCTGTTACCTCCCAAGTCATCAACTGTAGAAACCAGGCGGTCCAGTTTATCAGCGCCCTTGTGGATGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525964.6
ENST00000534532.6
ENST00000534548.7
CDS GCA 72 bp GTTGGTCTTCTCATCCCTGATCCTCCTTCTCAGCATTaGCATGACACATCTTTCTCCAGATCCAACTGTTTC +
Preference number: 6 (lower is better)
Translates to: VGLLIPDPPSQH*HDTSFSRSNCF
Trigger: GAAACAGTTGGATCTGGAGAAAGATGTGTCATGGCAATGCTGAGAAGGAGGATCAGGGATGAGAAGACCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525964.6
ENST00000534532.6
ENST00000534548.7
CDS CCA 72 bp CCACAAGGAAGTTTACTGAGCAGCTGGACTAGGGACTaGGCTGCAAAAGTACGATACTCTGATTTATCTACC +
Preference number: 6 (lower is better)
Translates to: PQGSLLSSWTRD*AAKVRYSDLST
Trigger: GGTAGATAAATCAGAGTATCGTACTTTTGCAGCCCAGTCCCTAGTCCAGCTGCTCAGTAAACTTCCTTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525964.6
ENST00000534532.6
ENST00000534548.7
CDS GCA 72 bp TTTTGTGAATGCAGCCAATCCAGTCTCTATGATCTCTaGTTCTATGCTGGGATCCAAAGGCTCAGTCTCTGT +
Preference number: 6 (lower is better)
Translates to: FCECSQSSLYDL*FYAGIQRLSLC
Trigger: ACAGAGACTGAGCCTTTGGATCCCAGCATAGAAGCAGAGATCATAGAGACTGGATTGGCTGCATTCACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525485.5
ENST00000525964.6
ENST00000533155.5
ENST00000534532.6
ENST00000534548.7
CDS GCA 72 bp TACTCTGATTTATCTACCACCTTGGCACAGATGTGCTaGAGTAAGATACGGACGACTGGGAATATACTCTCC +
Preference number: 6 (lower is better)
Translates to: YSDLSTTLAQMC*SKIRTTGNILS
Trigger: GGAGAGTATATTCCCAGTCGTCCGTATCTTACTGCAGCACATCTGTGCCAAGGTGGTAGATAAATCAGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525964.6
ENST00000534532.6
ENST00000534548.7
CDS CAA 72 bp ATACTCACTAATACCTGCAGTGCAGACTTCCTAACGTaGGTCTTCTCATCCCTGATCCTCCTTCTCAGCATT +
Preference number: 6 (lower is better)
Translates to: ILTNTCSADFLT*VFSSLILLLSI
Trigger: AATGCTGAGAAGGAGGATCAGGGATGAGAAGACCAACGTTAGGAAGTCTGCACTGCAGGTATTAGTGAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525964.6
ENST00000534532.6
ENST00000534548.7
CDS TCA 72 bp ATTTCCTGCACCAGGAACTTATGCTTTAAGAACTTCTaGTGCTCCAAGGAGAGGGTGTTATCCACCTCTCTT +
Preference number: 6 (lower is better)
Translates to: ISCTRNLCFKNF*CSKERVLSTSL
Trigger: AAGAGAGGTGGATAACACCCTCTCCTTGGAGCATCAGAAGTTCTTAAAGCATAAGTTCCTGGTGCAGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525964.6
ENST00000534532.6
ENST00000534548.7
CDS TCA 72 bp AGCATCCAGGCAGGTGCCGAATGTTCCGTGCCAGTGTaGGATATTACATTGTTTATAAAAGTGGGTGAGAAT +
Preference number: 6 (lower is better)
Translates to: SIQAGAECSVPV*DITLFIKVGEN
Trigger: ATTCTCACCCACTTTTATAAACAATGTAATATCTCACACTGGCACGGAACATTCGGCACCTGCCTGGATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525964.6
ENST00000534532.6
ENST00000534548.7
CDS CAA 72 bp CTGAATGCATTTGTCAAACATCACTGGGTGGAATACTaGATTGGCTACACTGCCTCCATAGATCCATGTTCT +
Preference number: 6 (lower is better)
Translates to: LNAFVKHHWVEY*IGYTASIDPCS
Trigger: AGAACATGGATCTATGGAGGCAGTGTAGCCAATCAAGTATTCCACCCAGTGATGTTTGACAAATGCATTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533155.5
CDS CCA 72 bp CAGGTGACTGTAATAAATGCCAAACACTTTGTCCCATaGTTTTCAATTTACCCAAACCAAGCCCAGATAAAC +
Preference number: 6 (lower is better)
Translates to: QVTVINAKHFVP*FSIYPNQAQIN
Trigger: GTTTATCTGGGCTTGGTTTGGGTAAATTGAAAACCATGGGACAAAGTGTTTGGCATTTATTACAGTCACCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528065.1
CDS CAA 90 bp GCCATATTCTCGATACTGTACACTGACATTCTTCTTATGAACTATTaGAACAAAATGATAGAACAATGCCACCAGTGTACTATGGGAAAC +
Preference number: 6 (lower is better)
Translates to: AIFSILYTDILLMNY*NKMIEQCHQCTMGN
Trigger: GTTTCCCATAGTACACTGGTGGCATTGTTCTATCATTTTGTTCAAATAGTTCATAAGAAGAATGTCAGTGTACAGTATCGAGAATATGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525964.6
ENST00000534532.6
ENST00000534548.7