RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NCAM2 (Homo sapiens)

Ensembl gene IDs: ENSG00000154654

Ensembl transcript IDs: ENST00000284894.8, ENST00000400546.6, ENST00000461281.1, ENST00000484983.1, ENST00000486367.1

Found 321 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCGCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTaGTGCCTTCAAACGAAGATGGTCATATTCTGTCCTGCTGTAGCC +
Preference number: 1 (lower is better)
Translates to: PAFNPATYGKDTATI*CLQTKMVIFCPAVA
Trigger: GGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR GCA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTaGCTTCAAACGAAGATGGTCATATTCTGTCCTGCTGTAGCCAGA +
Preference number: 1 (lower is better)
Translates to: AFNPATYGKDTATIW*LQTKMVIFCPAVAR
Trigger: TCTGGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR TCA 90 bp ACTGGCTCTTTGACGCCTACGTTCCCTGAAATTCCCCTGATAAAATaGGTAACCATTATTAAGCTCCTTCATCTTGAAGTTGAAAGCCAC +
Preference number: 1 (lower is better)
Translates to: TGSLTPTFPEIPLIK*VTIIKLLHLEVESH
Trigger: GTGGCTTTCAACTTCAAGATGAAGGAGCTTAATAATGGTTACTCATTTTATCAGGGGAATTTCAGGGAACGTAGGCGTCAAAGAGCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR GCA 90 bp ATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTCTaGAATGTTAAAATTGCTCCAATATTCCTTTGGAACGCATTCCCT +
Preference number: 1 (lower is better)
Translates to: IIRLSLQRDTPRAGF*NVKIAPIFLWNAFP
Trigger: AGGGAATGCGTTCCAAAGGAATATTGGAGCAATTTTAACATTGCAGAAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR TCA 90 bp TGCTCCAATATTCCTTTGGAACGCATTCCCTGTCCTGTCACTATTTaGGCTATAATACCACCTGAAACACCAAAGGTTCTGAATGTTACA +
Preference number: 1 (lower is better)
Translates to: CSNIPLERIPCPVTI*AIIPPETPKVLNVT
Trigger: TGTAACATTCAGAACCTTTGGTGTTTCAGGTGGTATTATAGCTCAAATAGTGACAGGACAGGGAATGCGTTCCAAAGGAATATTGGAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR CCA 90 bp AGTGTAATCGGCCATAATTTTTATCTAAGCAACGTTCCTAGTCCCTaGTCTAGCACTTCTCAAAGTCAGGTCCTTCTTAGCTATTCCAAA +
Preference number: 1 (lower is better)
Translates to: SVIGHNFYLSNVPSP*SSTSQSQVLLSYSK
Trigger: TTTGGAATAGCTAAGAAGGACCTGACTTTGAGAAGTGCTAGACCAGGGACTAGGAACGTTGCTTAGATAAAAATTATGGCCGATTACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400546.6
3UTR CCA 90 bp ACAACAACAGCAACAACAACAACAATAACAAAAGGGAATGGATCATaGGCAGGAGTATTTGATCATATGTATATGTGTACAAGCTATTCC +
Preference number: 1 (lower is better)
Translates to: TTTATTTTITKGNGS*AGVFDHMYMCTSYS
Trigger: GGAATAGCTTGTACACATATACATATGATCAAATACTCCTGCCCATGATCCATTCCCTTTTGTTATTGTTGTTGTTGTTGCTGTTGTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR GCA 90 bp AAAACCATGTGGCCCTATTTAGAAATAATTAGCATTCATGGCTATTaGTTCATGGACACTTTACTAAGCTTGTACACTTTGCACAAACAA +
Preference number: 1 (lower is better)
Translates to: KTMWPYLEIISIHGY*FMDTLLSLYTLHKQ
Trigger: TTGTTTGTGCAAAGTGTACAAGCTTAGTAAAGTGTCCATGAAGCAATAGCCATGAATGCTAATTATTTCTAAATAGGGCCACATGGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR-3UTR CCA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAAGCTCCAATATTCCTTTaGAACGCATTCCCTGTCCTG +
Preference number: 2 (lower is better)
Translates to: AFNPATYGKDTATIWCLQAPIFL*NAFPVL
Trigger: CAGGACAGGGAATGCGTTCCAAAGGAATATTGGAGC...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR-3UTR TCA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGGACGCCTACGTTCCCTaGAATTCCCCTGATAAAATG +
Preference number: 2 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKDAYVP*NSPDKM
Trigger: CATTTTATCAGGGGAATTTCAGGGAACGTAGGCGTC...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR-3UTR CCA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAAAATAACAAAAGGGAATaGATCATGGGCAGGAGTATT +
Preference number: 2 (lower is better)
Translates to: AFNPATYGKDTATIWCLQNNKRE*IMGRSI
Trigger: AATACTCCTGCCCATGATCCATTCCCTTTTGTTATT...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR-3UTR CCA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGTCTGCTAAAGATAACTaGCTCTTTGACGCCTACGTT +
Preference number: 2 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKSAKDN*LFDAYV
Trigger: AACGTAGGCGTCAAAGAGCCAGTTATCTTTAGCAGA...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR-3UTR GCA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGATACCAAAGTGTTGGTaGCAGTCAGTCTTGATATTG +
Preference number: 2 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKIPKCW*QSVLIL
Trigger: CAATATCAAGACTGACTGGCACCAACACTTTGGTAT...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR-3UTR TCA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGATGGGCAGGAGTATTTaGTCATATGTATATGTGTAC +
Preference number: 2 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKMGRSI*SYVYVY
Trigger: GTACACATATACATATGATCAAATACTCCTGCCCAT...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR-3UTR CCA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTTCTGCTAAAGATAACTaGCTCTTTGACGCCTACGTT +
Preference number: 2 (lower is better)
Translates to: TFNNHQVISTERHTQSRFSAKDN*LFDAYV
Trigger: AACGTAGGCGTCAAAGAGCCAGTTATCTTTAGCAGA...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR CAA 90 bp TCCAAGCTAGAAGTTTCCCAAGAAATTAAGGTCAATGGAATAGTTTaGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTT +
Preference number: 2 (lower is better)
Translates to: SKLEVSQEIKVNGIV*VIGSRNPNTLRSVV
Trigger: AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCCATTGACCTTAATTTCTTGGGAAACTTCTAGCTTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR-3UTR GCA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTATACCAAAGTGTTGGTaGCAGTCAGTCTTGATATTG +
Preference number: 2 (lower is better)
Translates to: TFNNHQVISTERHTQSRFIPKCW*QSVLIL
Trigger: CAATATCAAGACTGACTGGCACCAACACTTTGGTAT...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR-3UTR CCA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACAATAACAAAAGGGAATaGATCATGGGCAGGAGTATT +
Preference number: 2 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYNNKRE*IMGRSI
Trigger: AATACTCCTGCCCATGATCCATTCCCTTTTGTTATT...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR-3UTR TCA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTATGGGCAGGAGTATTTaGTCATATGTATATGTGTAC +
Preference number: 2 (lower is better)
Translates to: TFNNHQVISTERHTQSRFMGRSI*SYVYVY
Trigger: GTACACATATACATATGATCAAATACTCCTGCCCAT...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR CCA 72 bp TACTTTATCACAGTATTGCCTTGCTTCAGCATGGCATaGATTTCAAGGACAAGAGGTAAGGACCACCCGGGC +
Preference number: 3 (lower is better)
Translates to: YFITVLPCFSMA*ISRTRGKDHPG
Trigger: GCCCGGGTGGTCCTTACCTCTTGTCCTTGAAATCCATGCCATGCTGAAGCAAGGCAATACTGTGATAAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400546.6
3UTR-3UTR CAA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAAAAGATAACTGGCTCTTaGACGCCTACGTTCCCTGAA +
Preference number: 3 (lower is better)
Translates to: AFNPATYGKDTATIWCLQKITGS*TPTFPE
Trigger: TTCAGGGAACGTAGGCGTCAAAGAGCCAGTTATCTT...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR GCA 72 bp CCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTaGCTTCAAACGAAGATGGTCATATTCTGTCCTGCT +
Preference number: 3 (lower is better)
Translates to: PATYGKDTATIW*LQTKMVIFCPA
Trigger: AGCAGGACAGAATATGACCATCTTCGTTTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR CCA 72 bp AACCCTGCAACTTATGGCAAAGACACTGCGACGATTTaGTGCCTTCAAACGAAGATGGTCATATTCTGTCCT +
Preference number: 3 (lower is better)
Translates to: NPATYGKDTATI*CLQTKMVIFCP
Trigger: AGGACAGAATATGACCATCTTCGTTTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR-3UTR CAA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAAGTCAATGGAATAGTTTaGGTCATAGGGTCACGCAAT +
Preference number: 3 (lower is better)
Translates to: AFNPATYGKDTATIWCLQVNGIV*VIGSRN
Trigger: ATTGCGTGACCCTATGACCAAAACTATTCCATTGAC...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR-3UTR CAA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAATTGAATACCAAAGTGTaGGTGCCAGTCAGTCTTGAT +
Preference number: 3 (lower is better)
Translates to: AFNPATYGKDTATIWCLQLNTKV*VPVSLD
Trigger: ATCAAGACTGACTGGCACCAACACTTTGGTATTCAA...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR-3UTR CAA 90 bp CCTTCAAACGAAGATGGTCATATTCTGTCCTGCTGTAGCCAGAAAAGTGATGAAAAGATAACTGGCTCTTaGACGCCTACGTTCCCTGAA +
Preference number: 3 (lower is better)
Translates to: PSNEDGHILSCCSQKSDEKITGS*TPTFPE
Trigger: TTCAGGGAACGTAGGCGTCAAAGAGCCAGTTATCTT...TTCATCACTTTTCTGGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR TCA 72 bp ATTCCTTTGGAACGCATTCCCTGTCCTGTCACTATTTaGGCTATAATACCACCTGAAACACCAAAGGTTCTG +
Preference number: 3 (lower is better)
Translates to: IPLERIPCPVTI*AIIPPETPKVL
Trigger: CAGAACCTTTGGTGTTTCAGGTGGTATTATAGCTCAAATAGTGACAGGACAGGGAATGCGTTCCAAAGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR-3UTR CAA 90 bp CCTTCAAACGAAGATGGTCATATTCTGTCCTGCTGTAGCCAGAAAAGTGATGAAGTCAATGGAATAGTTTaGGTCATAGGGTCACGCAAT +
Preference number: 3 (lower is better)
Translates to: PSNEDGHILSCCSQKSDEVNGIV*VIGSRN
Trigger: ATTGCGTGACCCTATGACCAAAACTATTCCATTGAC...TTCATCACTTTTCTGGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR-3UTR CAA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAATGGTGCCAGTCAGTCTaGATATTGAAATTCTTAACA +
Preference number: 3 (lower is better)
Translates to: AFNPATYGKDTATIWCLQWCQSV*ILKFLT
Trigger: TGTTAAGAATTTCAATATCAAGACTGACTGGCACCA...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR-3UTR CAA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGTTGAATACCAAAGTGTaGGTGCCAGTCAGTCTTGAT +
Preference number: 3 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKLNTKV*VPVSLD
Trigger: ATCAAGACTGACTGGCACCAACACTTTGGTATTCAA...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR-3UTR CAA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAATTAAGCTCCTTCATCTaGAAGTTGAAAGCCACTTTA +
Preference number: 3 (lower is better)
Translates to: AFNPATYGKDTATIWCLQLSSFI*KLKATL
Trigger: TAAAGTGGCTTTCAACTTCAAGATGAAGGAGCTTAA...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR-3UTR CAA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAAAAATGGGTAACAATTTaGATCTGGCACTTCAGTCTA +
Preference number: 3 (lower is better)
Translates to: AFNPATYGKDTATIWCLQKWVTI*IWHFSL
Trigger: TAGACTGAAGTGCCAGATCAAAATTGTTACCCATTT...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR CCA 72 bp AAAAATACTTTATCACAGTATTGCCTTGCTTCAGCATaGCATGGATTTCAAGGACAAGAGGTAAGGACCACC +
Preference number: 3 (lower is better)
Translates to: KNTLSQYCLASA*HGFQGQEVRTT
Trigger: GGTGGTCCTTACCTCTTGTCCTTGAAATCCATGCCATGCTGAAGCAAGGCAATACTGTGATAAAGTATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400546.6
3UTR-3UTR CAA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTATTACCTCTGGGAGCTaGCATAGCTTGGAAGTAAAG +
Preference number: 3 (lower is better)
Translates to: TFNNHQVISTERHTQSRFITSGS*HSLEVK
Trigger: CTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAAT...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR-3UTR CAA 90 bp CCTTCAAACGAAGATGGTCATATTCTGTCCTGCTGTAGCCAGAAAAGTGATGAACATGGGCAGGAGTATTaGATCATATGTATATGTGTA +
Preference number: 3 (lower is better)
Translates to: PSNEDGHILSCCSQKSDEHGQEY*IICICV
Trigger: TACACATATACATATGATCAAATACTCCTGCCCATG...TTCATCACTTTTCTGGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR-3UTR CAA 90 bp CCTTCAAACGAAGATGGTCATATTCTGTCCTGCTGTAGCCAGAAAAGTGATGAATCCTTCATCTTGAAGTaGAAAGCCACTTTAAGAATC +
Preference number: 3 (lower is better)
Translates to: PSNEDGHILSCCSQKSDESFILK*KATLRI
Trigger: GATTCTTAAAGTGGCTTTCAACTTCAAGATGAAGGA...TTCATCACTTTTCTGGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR-3UTR CAA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGTCCTTCATCTTGAAGTaGAAAGCCACTTTAAGAATC +
Preference number: 3 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKSFILK*KATLRI
Trigger: GATTCTTAAAGTGGCTTTCAACTTCAAGATGAAGGA...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR-3UTR CAA 90 bp CCTTCAAACGAAGATGGTCATATTCTGTCCTGCTGTAGCCAGAAAAGTGATGAAAAATGGGTAACAATTTaGATCTGGCACTTCAGTCTA +
Preference number: 3 (lower is better)
Translates to: PSNEDGHILSCCSQKSDEKWVTI*IWHFSL
Trigger: TAGACTGAAGTGCCAGATCAAAATTGTTACCCATTT...TTCATCACTTTTCTGGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR TCA 72 bp CTTTGTTTCTCTACTCTCCTATGTCGGGTTGTGATTTaGAATTCTCCAACAGTGATGGTTTTGCTTACTGTC +
Preference number: 3 (lower is better)
Translates to: LCFSTLLCRVVI*NSPTVMVLLTV
Trigger: GACAGTAAGCAAAACCATCACTGTTGGAGAATTTCAAATCACAACCCGACATAGGAGAGTAGAGAAACAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400546.6
3UTR GCA 72 bp TTATCTCTACAGAGAGACACACCCAGAGCAGGTTTCTaGAATGTTAAAATTGCTCCAATATTCCTTTGGAAC +
Preference number: 3 (lower is better)
Translates to: LSLQRDTPRAGF*NVKIAPIFLWN
Trigger: GTTCCAAAGGAATATTGGAGCAATTTTAACATTGCAGAAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR-3UTR CAA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACCATGGGCAGGAGTATTaGATCATATGTATATGTGTA +
Preference number: 3 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYHGQEY*IICICV
Trigger: TACACATATACATATGATCAAATACTCCTGCCCATG...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR TCA 72 bp TTGACGCCTACGTTCCCTGAAATTCCCCTGATAAAATaGGTAACCATTATTAAGCTCCTTCATCTTGAAGTT +
Preference number: 3 (lower is better)
Translates to: LTPTFPEIPLIK*VTIIKLLHLEV
Trigger: AACTTCAAGATGAAGGAGCTTAATAATGGTTACTCATTTTATCAGGGGAATTTCAGGGAACGTAGGCGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR GCA 72 bp TTGGTGCCTTCAAACGAAGATGGTCATATTCTGTCCTaGTGTAGCCAGAAAAGTGATGAATTATATAAAAGT +
Preference number: 3 (lower is better)
Translates to: LVPSNEDGHILS*CSQKSDELYKS
Trigger: ACTTTTATATAATTCATCACTTTTCTGGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGGCACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR GCA 72 bp TGGCCCTATTTAGAAATAATTAGCATTCATGGCTATTaGTTCATGGACACTTTACTAAGCTTGTACACTTTG +
Preference number: 3 (lower is better)
Translates to: WPYLEIISIHGY*FMDTLLSLYTL
Trigger: CAAAGTGTACAAGCTTAGTAAAGTGTCCATGAAGCAATAGCCATGAATGCTAATTATTTCTAAATAGGGCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR GCA 72 bp CTTTCCTCTTATATGTTGTTGAATACAGATTGTCACTaGCTAATTGCACCTAACCTATCAAGAAATACCAAG +
Preference number: 3 (lower is better)
Translates to: LSSYMLLNTDCH*LIAPNLSRNTK
Trigger: CTTGGTATTTCTTGATAGGTTAGGTGCAATTAGGCAGTGACAATCTGTATTCAACAACATATAAGAGGAAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400546.6
CDS-3UTR TCA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAAGGGTTCTGGAGAGCCTaGGGCCCTGCAGGAAAATGT +
Preference number: 4 (lower is better)
Translates to: AFNPATYGKDTATIWCLQGFWRA*GPAGKC
Trigger: ACATTTTCCTGCAGGGCCTCAGGCTCTCCAGAACCC...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAAGACAGCAGGTGCAGGTaGACTGCTAACTCGGCAAAC +
Preference number: 4 (lower is better)
Translates to: AFNPATYGKDTATIWCLQDSRCR*TANSAN
Trigger: GTTTGCCGAGTTAGCAGTTCACCTGCACCTGCTGTC...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAATTCCATGCTGCCCTTTaGCTTCGATACGGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: AFNPATYGKDTATIWCLQFHAAL*LRYGRP
Trigger: TGGACGGCCGTATCGAAGTCAAAGGGCAGCATGGAA...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGGAGCTTGCCCGCTACTaGCAAGCAACCCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKELARY*QATPAG
Trigger: ACCTGCTGGGGTTGCTTGTCAGTAGCGGGCAAGCTC...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400546.6
CDS-3UTR TCA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGGGGTTCTGGAGAGCCTaGGGCCCTGCAGGAAAATGT +
Preference number: 4 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKGFWRA*GPAGKC
Trigger: ACATTTTCCTGCAGGGCCTCAGGCTCTCCAGAACCC...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAATCACTCCATAGGGACTaGATGGCACGTCAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: AFNPATYGKDTATIWCLQSLHRD*MARQPK
Trigger: CTTTGGCTGACGTGCCATCCAGTCCCTATGGAGTGA...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAATATGATACAACCAGCTaGCAGCAGGTGCAGGTGAAC +
Preference number: 4 (lower is better)
Translates to: AFNPATYGKDTATIWCLQYDTTS*QQVQVN
Trigger: GTTCACCTGCACCTGCTGTCAGCTGGTTGTATCATA...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGTTCCATGCTGCCCTTTaGCTTCGATACGGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKFHAAL*LRYGRP
Trigger: TGGACGGCCGTATCGAAGTCAAAGGGCAGCATGGAA...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTGGGAGTCCGGTTTGTTaGAGGAAACCTTGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVGSPVC*RKPWPW
Trigger: CCACGGCCAAGGTTTCCTTCAACAAACCGGACTCCC...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAAAGTCAATTTCTCCCCTaGCCTCCACTCTTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: AFNPATYGKDTATIWCLQSQFLP*PPLFLH
Trigger: GTGAAGGAAGAGTGGAGGCCAGGGGAGAAATTGACT...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAAGAACTTCATACCCCATaGTCCACTGGAGATGCTCCA +
Preference number: 4 (lower is better)
Translates to: AFNPATYGKDTATIWCLQELHTP*STGDAP
Trigger: TGGAGCATCTCCAGTGGACCATGGGGTATGAAGTTC...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTGACAGCAGGTGCAGGTaGACTGCTAACTCGGCAAAC +
Preference number: 4 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVDSRCR*TANSAN
Trigger: GTTTGCCGAGTTAGCAGTTCACCTGCACCTGCTGTC...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTGGGAGTCCGGTTTGTTaGAGGAAACCTTGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: TFNNHQVISTERHTQSRFGSPVC*RKPWPW
Trigger: CCACGGCCAAGGTTTCCTTCAACAAACCGGACTCCC...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAATTGGCAGCTGTAATCTaGACTTCATACCCCATGGTC +
Preference number: 4 (lower is better)
Translates to: AFNPATYGKDTATIWCLQLAAVI*TSYPMV
Trigger: GACCATGGGGTATGAAGTTCAGATTACAGCTGCCAA...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp CCTTCAAACGAAGATGGTCATATTCTGTCCTGCTGTAGCCAGAAAAGTGATGAACTCATGTTCAGGACGTaGCACCGGTGGACAGTTTCA +
Preference number: 4 (lower is better)
Translates to: PSNEDGHILSCCSQKSDELMFRT*HRWTVS
Trigger: TGAAACTGTCCACCGGTGTCACGTCCTGAACATGAG...TTCATCACTTTTCTGGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400546.6
CDS-3UTR GCA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAACCTTATTTGTGGCCCTaGAGACATAAGGACCACCAT +
Preference number: 4 (lower is better)
Translates to: AFNPATYGKDTATIWCLQPYLWP*RHKDHH
Trigger: ATGGTGGTCCTTATGTCTGCAGGGCCACAAATAAGG...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAAATAGGTACACCTCCATaGGAGTCCGGTTTGTTGAAG +
Preference number: 4 (lower is better)
Translates to: AFNPATYGKDTATIWCLQIGTPP*ESGLLK
Trigger: CTTCAACAAACCGGACTCCCATGGAGGTGTACCTAT...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAACTGTCCATGTATGGATaGAGGACTTGGTTCACGAAC +
Preference number: 4 (lower is better)
Translates to: AFNPATYGKDTATIWCLQLSMYG*RTWFTN
Trigger: GTTCGTGAACCAAGTCCTCCATCCATACATGGACAG...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAATTGGCATCTGTTGCTTaGCAACGATATATCCCTGCA +
Preference number: 4 (lower is better)
Translates to: AFNPATYGKDTATIWCLQLASVA*QRYIPA
Trigger: TGCAGGGATATATCGTTGTCAAGCAACAGATGCCAA...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAAGCTTTGGTGGCATGCTaGATTCATAAACTGTCGGTT +
Preference number: 4 (lower is better)
Translates to: AFNPATYGKDTATIWCLQALVAC*IHKLSV
Trigger: AACCGACAGTTTATGAATTCAGCATGCCACCAAAGC...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGGACCACCCGGGCAACTaGAACAGTGCACTTGAAATA +
Preference number: 4 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKDHPGN*NSALEI
Trigger: TATTTCAAGTGCACTGTTTCAGTTGCCCGGGTGGTC...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400546.6
CDS-3UTR GCA 90 bp CCTTCAAACGAAGATGGTCATATTCTGTCCTGCTGTAGCCAGAAAAGTGATGAAGATGAGCTTCCATGCTaGCCTTTGACTTCGATACGG +
Preference number: 4 (lower is better)
Translates to: PSNEDGHILSCCSQKSDEDELPC*PLTSIR
Trigger: CCGTATCGAAGTCAAAGGGCAGCATGGAAGCTCATC...TTCATCACTTTTCTGGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR GCA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACACCTTGGCCGTGGTCTaGGACAGCTCTATGATCTTC +
Preference number: 4 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYTLAVV*DSSMIF
Trigger: GAAGATCATAGAGCTGTCGCAGACCACGGCCAAGGT...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR GCA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAAATGGTCCACTGGAGATaGTCCAAAATGATGTGGTCT +
Preference number: 4 (lower is better)
Translates to: AFNPATYGKDTATIWCLQMVHWR*SKMMWS
Trigger: AGACCACATCATTTTGGAGCATCTCCAGTGGACCAT...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR GCA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAAATCAGCAACCCACATTaGCGAATAAAGAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: AFNPATYGKDTATIWCLQISNPH*RIKKQL
Trigger: CAGCTGCTTCTTTATTCGGCAATGTGGGTTGCTGAT...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp CCTTCAAACGAAGATGGTCATATTCTGTCCTGCTGTAGCCAGAAAAGTGATGAAAGTCAATTTCTCCCCTaGCCTCCACTCTTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: PSNEDGHILSCCSQKSDESQFLP*PPLFLH
Trigger: GTGAAGGAAGAGTGGAGGCCAGGGGAGAAATTGACT...TTCATCACTTTTCTGGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTTCCATAGGGACTGGATaGCACGTCAGCCAAAGCAAG +
Preference number: 4 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVSIGTG*HVSQSK
Trigger: CTTGCTTTGGCTGACGTGCCATCCAGTCCCTATGGA...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGGCTCTTTCCACTGCTTaGCTGTCCATGTATGGATGG +
Preference number: 4 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKALSTA*LSMYGW
Trigger: CCATCCATACATGGACAGCCAAGCAGTGGAAAGAGC...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTTATGATACAACCAGCTaGCAGCAGGTGCAGGTGAAC +
Preference number: 4 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVYDTTS*QQVQVN
Trigger: GTTCACCTGCACCTGCTGTCAGCTGGTTGTATCATA...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGAGATTTCTGAGGCATTaGGATTGCTGGCGGCACATT +
Preference number: 4 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKRFLRH*DCWRHI
Trigger: AATGTGCCGCCAGCAATCTCAATGCCTCAGAAATCT...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACTCTGCGACAGCTCTATaGTCTTCACTCCATAGGGAC +
Preference number: 4 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYSATAL*SSLHRD
Trigger: GTCCCTATGGAGTGAAGATCATAGAGCTGTCGCAGA...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTTCTGCGACAGCTCTATaGTCTTCACTCCATAGGGAC +
Preference number: 4 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVSATAL*SSLHRD
Trigger: GTCCCTATGGAGTGAAGATCATAGAGCTGTCGCAGA...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp CCTTCAAACGAAGATGGTCATATTCTGTCCTGCTGTAGCCAGAAAAGTGATGAATTGGCAGCTGTAATCTaGACTTCATACCCCATGGTC +
Preference number: 4 (lower is better)
Translates to: PSNEDGHILSCCSQKSDELAAVI*TSYPMV
Trigger: GACCATGGGGTATGAAGTTCAGATTACAGCTGCCAA...TTCATCACTTTTCTGGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp CCTTCAAACGAAGATGGTCATATTCTGTCCTGCTGTAGCCAGAAAAGTGATGAAGGGCTCCCATCTTCGTaGTTAGTAACTCTTTCATCC +
Preference number: 4 (lower is better)
Translates to: PSNEDGHILSCCSQKSDEGLPSS*LVTLSS
Trigger: GGATGAAAGAGTTACTAATCACGAAGATGGGAGCCC...TTCATCACTTTTCTGGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAATGTCGGGTTGTGATTTaGAATTCTCCAACAGTGATG +
Preference number: 4 (lower is better)
Translates to: AFNPATYGKDTATIWCLQCRVVI*NSPTVM
Trigger: CATCACTGTTGGAGAATTTCAAATCACAACCCGACA...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400546.6
CDS-3UTR GCA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACGATGAGCTTCCATGCTaGCCTTTGACTTCGATACGG +
Preference number: 4 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYDELPC*PLTSIR
Trigger: CCGTATCGAAGTCAAAGGGCAGCATGGAAGCTCATC...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR GCA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGACTGCGACGATTTGGTaGCTTCAAACGAAGATGGTC +
Preference number: 4 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKTATIW*LQTKMV
Trigger: GACCATCTTCGTTTGAAGGCACCAAATCGTCGCAGT...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAAGGCTGTACAAAGACTTaGAGGAAAGCTTGCTTTTCA +
Preference number: 4 (lower is better)
Translates to: AFNPATYGKDTATIWCLQGCTKT*RKACFS
Trigger: TGAAAAGCAAGCTTTCCTCCAAGTCTTTGTACAGCC...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTTCACTCCATAGGGACTaGATGGCACGTCAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: TFNNHQVISTERHTQSRFSLHRD*MARQPK
Trigger: CTTTGGCTGACGTGCCATCCAGTCCCTATGGAGTGA...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGTACCCCATGGTCCACTaGAGATGCTCCAAAATGATG +
Preference number: 4 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKYPMVH*RCSKMM
Trigger: CATCATTTTGGAGCATCTCCAGTGGACCATGGGGTA...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGTGGTGTGGTTTCATTTaGCTCATTTACTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKWCGFI*LIYWAP
Trigger: GGGAGCCCAGTAAATGAGCCAAATGAAACCACACCA...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp CCTTCAAACGAAGATGGTCATATTCTGTCCTGCTGTAGCCAGAAAAGTGATGAATGGTGTGGTTTCATTTaGCTCATTTACTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: PSNEDGHILSCCSQKSDEWCGFI*LIYWAP
Trigger: GGGAGCCCAGTAAATGAGCCAAATGAAACCACACCA...TTCATCACTTTTCTGGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAATCTGCTAAAGATAACTaGCTCTTTGACGCCTACGTT +
Preference number: 4 (lower is better)
Translates to: AFNPATYGKDTATIWCLQSAKDN*LFDAYV
Trigger: AACGTAGGCGTCAAAGAGCCAGTTATCTTTAGCAGA...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGGCTCCAATATTCCTTTaGAACGCATTCCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKAPIFL*NAFPVL
Trigger: CAGGACAGGGAATGCGTTCCAAAGGAATATTGGAGC...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGGACACTGCGACGATTTaGTGCCTTCAAACGAAGATG +
Preference number: 4 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKDTATI*CLQTKM
Trigger: CATCTTCGTTTGAAGGCACCAAATCGTCGCAGTGTC...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAATACTACCCTCTGTGTTaGAATTATCTTCTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: AFNPATYGKDTATIWCLQYYPLC*NYLLSL
Trigger: CAAGGAGAGAAGATAATTTCAACACAGAGGGTAGTA...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGTTGGCATCTGTTGCTTaGCAACGATATATCCCTGCA +
Preference number: 4 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKLASVA*QRYIPA
Trigger: TGCAGGGATATATCGTTGTCAAGCAACAGATGCCAA...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAACACTATTGGTTCTTTTaGTCCATCTTTCAGGTATGC +
Preference number: 4 (lower is better)
Translates to: AFNPATYGKDTATIWCLQHYWFF*SIFQVC
Trigger: GCATACCTGAAAGATGGATCAAAAGAACCAATAGTG...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTGGGCTCCCATCTTCGTaGTTAGTAACTCTTTCATCC +
Preference number: 4 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVGLPSS*LVTLSS
Trigger: GGATGAAAGAGTTACTAATCACGAAGATGGGAGCCC...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTGACGCCTACGTTCCCTaGAATTCCCCTGATAAAATG +
Preference number: 4 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVDAYVP*NSPDKM
Trigger: CATTTTATCAGGGGAATTTCAGGGAACGTAGGCGTC...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGAGTGAAATTGTCACTTaGAGAAGAGCTTGCCCGCTA +
Preference number: 4 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKSEIVT*RRACPL
Trigger: TAGCGGGCAAGCTCTTCTTCAAGTGACAATTTCACT...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400546.6
CDS-3UTR TCA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAAGATCATTACTCCACATaGGTGGCAGGAAATTTAACA +
Preference number: 4 (lower is better)
Translates to: AFNPATYGKDTATIWCLQDHYST*VAGNLT
Trigger: TGTTAAATTTCCTGCCACTCATGTGGAGTAATGATC...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400546.6
CDS-3UTR GCA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGACTTGGAGGAAAGCTTaGTTTTCATCTTCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKTWRKA*FSSSPA
Trigger: GGCAGGAGAAGATGAAAAGCAAGCTTTCCTCCAAGT...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR GCA 90 bp CCTTCAAACGAAGATGGTCATATTCTGTCCTGCTGTAGCCAGAAAAGTGATGAAAGTGATGAGCTTCCATaGTGCCCTTTGACTTCGATA +
Preference number: 4 (lower is better)
Translates to: PSNEDGHILSCCSQKSDESDELP*CPLTSI
Trigger: TATCGAAGTCAAAGGGCAGCATGGAAGCTCATCACT...TTCATCACTTTTCTGGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR GCA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGAGTGATGAGCTTCCATaGTGCCCTTTGACTTCGATA +
Preference number: 4 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKSDELP*CPLTSI
Trigger: TATCGAAGTCAAAGGGCAGCATGGAAGCTCATCACT...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR GCA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACGATGCCCTCCAATTCTaGTTGCAGCTTCACAGTCAT +
Preference number: 4 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYDALQF*LQLHSH
Trigger: ATGACTGTGAAGCTGCAAGCAGAATTGGAGGGCATC...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR GCA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACACTGCGACGATTTGGTaGCTTCAAACGAAGATGGTC +
Preference number: 4 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYTATIW*LQTKMV
Trigger: GACCATCTTCGTTTGAAGGCACCAAATCGTCGCAGT...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR GCA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGTTATGGCAAAGACACTaGGACGATTTGGTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKLWQRH*DDLVPS
Trigger: TGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAA...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTATAGGTACACCTCCATaGGAGTCCGGTTTGTTGAAG +
Preference number: 4 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVIGTPP*ESGLLK
Trigger: CTTCAACAAACCGGACTCCCATGGAGGTGTACCTAT...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTTTGGCTGTCCATGTATaGATGGAGGACTTGGTTCAC +
Preference number: 4 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVLAVHV*MEDLVH
Trigger: GTGAACCAAGTCCTCCATCCATACATGGACAGCCAA...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACTTGGCTGTCCATGTATaGATGGAGGACTTGGTTCAC +
Preference number: 4 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYLAVHV*MEDLVH
Trigger: GTGAACCAAGTCCTCCATCCATACATGGACAGCCAA...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTGCTCTTTCCACTGCTTaGCTGTCCATGTATGGATGG +
Preference number: 4 (lower is better)
Translates to: TFNNHQVISTERHTQSRFALSTA*LSMYGW
Trigger: CCATCCATACATGGACAGCCAAGCAGTGGAAAGAGC...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAAGTTCTGTCAGTGGTGTaGTTTCATTTGGCTCATTTA +
Preference number: 4 (lower is better)
Translates to: AFNPATYGKDTATIWCLQVLSVV*FHLAHL
Trigger: TAAATGAGCCAAATGAAACCACACCACTGACAGAAC...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp CCTTCAAACGAAGATGGTCATATTCTGTCCTGCTGTAGCCAGAAAAGTGATGAATTCAGGTTCTGTCAGTaGTGTGGTTTCATTTGGCTC +
Preference number: 4 (lower is better)
Translates to: PSNEDGHILSCCSQKSDEFRFCQ*CGFIWL
Trigger: GAGCCAAATGAAACCACACCACTGACAGAACCTGAA...TTCATCACTTTTCTGGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACGCTCCAATATTCCTTTaGAACGCATTCCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYAPIFL*NAFPVL
Trigger: CAGGACAGGGAATGCGTTCCAAAGGAATATTGGAGC...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACGACACTGCGACGATTTaGTGCCTTCAAACGAAGATG +
Preference number: 4 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYDTATI*CLQTKM
Trigger: CATCTTCGTTTGAAGGCACCAAATCGTCGCAGTGTC...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp CCTTCAAACGAAGATGGTCATATTCTGTCCTGCTGTAGCCAGAAAAGTGATGAATGCTTCAGCATGGCATaGATTTCAAGGACAAGAGGT +
Preference number: 4 (lower is better)
Translates to: PSNEDGHILSCCSQKSDECFSMA*ISRTRG
Trigger: ACCTCTTGTCCTTGAAATCCATGCCATGCTGAAGCA...TTCATCACTTTTCTGGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400546.6
CDS-3UTR TCA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTGTGACTTCCTCATTATaGTACAACCAGCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVVTSSL*YNQLTA
Trigger: TGCTGTCAGCTGGTTGTATCATAATGAGGAAGTCAC...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTAGATTTCTGAGGCATTaGGATTGCTGGCGGCACATT +
Preference number: 4 (lower is better)
Translates to: TFNNHQVISTERHTQSRFRFLRH*DCWRHI
Trigger: AATGTGCCGCCAGCAATCTCAATGCCTCAGAAATCT...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTAGGTACATGCTCTTTTaGTGCCCTCCAATTCTGCTT +
Preference number: 4 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVRYMLF*CPPILL
Trigger: AAGCAGAATTGGAGGGCATCAAAAGAGCATGTACCT...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGTCTTCTCCAGTGAATTaGTGCTGGTGGATTCGATTT +
Preference number: 4 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKSSPVN*CWWIRF
Trigger: AAATCGAATCCACCAGCATCAATTCACTGGAGAAGA...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACCTGACGCTACTTCTTTaGCATCCACCTGATAGTGAT +
Preference number: 4 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYLTLLL*HPPDSD
Trigger: ATCACTATCAGGTGGATGTCAAAGAAGTAGCGTCAG...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTCTGACGCTACTTCTTTaGCATCCACCTGATAGTGAT +
Preference number: 4 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVLTLLL*HPPDSD
Trigger: ATCACTATCAGGTGGATGTCAAAGAAGTAGCGTCAG...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTGACGCCTACGTTCCCTaGAATTCCCCTGATAAAATG +
Preference number: 4 (lower is better)
Translates to: TFNNHQVISTERHTQSRFDAYVP*NSPDKM
Trigger: CATTTTATCAGGGGAATTTCAGGGAACGTAGGCGTC...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp CCTTCAAACGAAGATGGTCATATTCTGTCCTGCTGTAGCCAGAAAAGTGATGAATCCTATGTCGGGTTGTaGTTTGAAATTCTCCAACAG +
Preference number: 4 (lower is better)
Translates to: PSNEDGHILSCCSQKSDESYVGL*FEILQQ
Trigger: CTGTTGGAGAATTTCAAATCACAACCCGACATAGGA...TTCATCACTTTTCTGGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400546.6
CDS-3UTR GCA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGTCCTTTGGCATCTGTTaGTTGACAACGATATATCCC +
Preference number: 4 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKSFGIC*LTTIYP
Trigger: GGGATATATCGTTGTCAAGCAACAGATGCCAAAGGA...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR GCA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACCCCTCCAATTCTGCTTaGAGCTTCACAGTCATATCT +
Preference number: 4 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYPSNSA*SFTVIS
Trigger: AGATATGACTGTGAAGCTGCAAGCAGAATTGGAGGG...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR GCA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACATGGTCCACTGGAGATaGTCCAAAATGATGTGGTCT +
Preference number: 4 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYMVHWR*SKMMWS
Trigger: AGACCACATCATTTTGGAGCATCTCCAGTGGACCAT...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR GCA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACATCAGCAACCCACATTaGCGAATAAAGAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYISNPH*RIKKQL
Trigger: CAGCTGCTTCTTTATTCGGCAATGTGGGTTGCTGAT...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR GCA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACTTATGGCAAAGACACTaGGACGATTTGGTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYLWQRH*DDLVPS
Trigger: TGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAA...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTTTTCCAAGTGATTTCTaGAATAGGCTCCCCTTCCGC +
Preference number: 4 (lower is better)
Translates to: TFNNHQVISTERHTQSRFFPSDF*NRLPFR
Trigger: GCGGAAGGGGAGCCTATTCCAGAAATCACTTGGAAA...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTCTGTCCATGTATGGATaGAGGACTTGGTTCACGAAC +
Preference number: 4 (lower is better)
Translates to: TFNNHQVISTERHTQSRFLSMYG*RTWFTN
Trigger: GTTCGTGAACCAAGTCCTCCATCCATACATGGACAG...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTTACCCCATGGTCCACTaGAGATGCTCCAAAATGATG +
Preference number: 4 (lower is better)
Translates to: TFNNHQVISTERHTQSRFYPMVH*RCSKMM
Trigger: CATCATTTTGGAGCATCTCCAGTGGACCATGGGGTA...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAAAATAATGTTGGGCTTTaGTGGCATGCTGAATTCATA +
Preference number: 4 (lower is better)
Translates to: AFNPATYGKDTATIWCLQNNVGL*WHAEFI
Trigger: TATGAATTCAGCATGCCACCAAAGCCCAACATTATT...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTTGCCTTGCTTCAGCATaGCATGGATTTCAAGGACAA +
Preference number: 4 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVCLASA*HGFQGQ
Trigger: TTGTCCTTGAAATCCATGCCATGCTGAAGCAAGGCA...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400546.6
CDS-3UTR CCA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACAACGTTCCTAGTCCCTaGTCTAGCACTTCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYNVPSP*SSTSQS
Trigger: ACTTTGAGAAGTGCTAGACCAGGGACTAGGAACGTT...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400546.6
CDS-3UTR TCA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTGCATTAAAAGATTTCTaGGGCATTGAGATTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVALKDF*GIEIAG
Trigger: GCCAGCAATCTCAATGCCTCAGAAATCTTTTAATGC...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp CCTTCAAACGAAGATGGTCATATTCTGTCCTGCTGTAGCCAGAAAAGTGATGAATTAAGCTGTATTATGTaGGGCTGTACAAAGACTTGG +
Preference number: 4 (lower is better)
Translates to: PSNEDGHILSCCSQKSDELSCIM*GCTKTW
Trigger: CCAAGTCTTTGTACAGCCTCACATAATACAGCTTAA...TTCATCACTTTTCTGGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACCATCACATACGAGTGTaGCTTGACCATTCTCATATG +
Preference number: 4 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYHHIRV*LDHSHM
Trigger: CATATGAGAATGGTCAAGTCACACTCGTATGTGATG...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTTTATCTCTTCTCCAGTaGATTGATGCTGGTGGATTC +
Preference number: 4 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVLSLLQ*IDAGGF
Trigger: GAATCCACCAGCATCAATTCACTGGAGAAGAGATAA...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTGCTTTGGTGGCATGCTaGATTCATAAACTGTCGGTT +
Preference number: 4 (lower is better)
Translates to: TFNNHQVISTERHTQSRFALVAC*IHKLSV
Trigger: AACCGACAGTTTATGAATTCAGCATGCCACCAAAGC...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp CCTTCAAACGAAGATGGTCATATTCTGTCCTGCTGTAGCCAGAAAAGTGATGAAGCTGTCGTCTTCTTTTaGTTGAATGATGTCGTTAGA +
Preference number: 4 (lower is better)
Translates to: PSNEDGHILSCCSQKSDEAVVFF*LNDVVR
Trigger: TCTAACGACATCATTCAATCAAAAGAAGACGACAGC...TTCATCACTTTTCTGGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGGCTGTCGTCTTCTTTTaGTTGAATGATGTCGTTAGA +
Preference number: 4 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKAVVFF*LNDVVR
Trigger: TCTAACGACATCATTCAATCAAAAGAAGACGACAGC...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp CCTTCAAACGAAGATGGTCATATTCTGTCCTGCTGTAGCCAGAAAAGTGATGAAAGCTATAATACCACCTaGAACACCAAAGGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: PSNEDGHILSCCSQKSDESYNTT*NTKGSE
Trigger: TTCAGAACCTTTGGTGTTTCAGGTGGTATTATAGCT...TTCATCACTTTTCTGGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp CCTTCAAACGAAGATGGTCATATTCTGTCCTGCTGTAGCCAGAAAAGTGATGAACCTCTTATATGTTGTTaGATACAGATTGTCACTGCC +
Preference number: 4 (lower is better)
Translates to: PSNEDGHILSCCSQKSDEPLICC*IQIVTA
Trigger: GGCAGTGACAATCTGTATTCAACAACATATAAGAGG...TTCATCACTTTTCTGGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400546.6
CDS-3UTR GCA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTTCCTTTGGCATCTGTTaGTTGACAACGATATATCCC +
Preference number: 4 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVSFGIC*LTTIYP
Trigger: GGGATATATCGTTGTCAAGCAACAGATGCCAAAGGA...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR GCA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTCCCTCCAATTCTGCTTaGAGCTTCACAGTCATATCT +
Preference number: 4 (lower is better)
Translates to: TFNNHQVISTERHTQSRFPSNSA*SFTVIS
Trigger: AGATATGACTGTGAAGCTGCAAGCAGAATTGGAGGG...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR GCA 90 bp CCTTCAAACGAAGATGGTCATATTCTGTCCTGCTGTAGCCAGAAAAGTGATGAACAATATCAAGGTACATaGTCTTTTGATGCCCTCCAA +
Preference number: 4 (lower is better)
Translates to: PSNEDGHILSCCSQKSDEQYQGT*SFDALQ
Trigger: TTGGAGGGCATCAAAAGAGCATGTACCTTGATATTG...TTCATCACTTTTCTGGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR GCA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACCGAGTTCTTTACTTTTaGCACTGGAGCCACTTTTCT +
Preference number: 4 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYRVLYF*HWSHFS
Trigger: AGAAAAGTGGCTCCAGTGGCAAAAGTAAAGAACTCG...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR GCA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTTCCATCTTTCAGGTATaGAGCTTTTCCTTCTTCGAG +
Preference number: 4 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVSIFQV*SFSFFE
Trigger: CTCGAAGAAGGAAAAGCTGCATACCTGAAAGATGGA...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR GCA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACATCACAGTATTGCCTTaGTTCAGCATGGCATGGATT +
Preference number: 4 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYITVLP*FSMAWI
Trigger: AATCCATGCCATGCTGAAGCAAGGCAATACTGTGAT...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400546.6
CDS-3UTR GCA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGACTTTATCACAGTATTaGCTTGCTTCAGCATGGCAT +
Preference number: 4 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKTLSQY*LASAWH
Trigger: ATGCCATGCTGAAGCAAGGCAATACTGTGATAAAGT...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400546.6
CDS-3UTR CCA 90 bp CCTTCAAACGAAGATGGTCATATTCTGTCCTGCTGTAGCCAGAAAAGTGATGAAAATGTTGGGCTTTGGTaGCATGCTGAATTCATAAAC +
Preference number: 4 (lower is better)
Translates to: PSNEDGHILSCCSQKSDENVGLW*HAEFIN
Trigger: GTTTATGAATTCAGCATGCCACCAAAGCCCAACATT...TTCATCACTTTTCTGGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTATTTGGCTCATTTACTaGGCTCCCATCTTCGTGATT +
Preference number: 4 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVIWLIY*APIFVI
Trigger: AATCACGAAGATGGGAGCCCAGTAAATGAGCCAAAT...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTGCCTTCAAACGAAGATaGTCATATTCTGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: TFNNHQVISTERHTQSRFAFKRR*SYSVLL
Trigger: CAGCAGGACAGAATATGACCATCTTCGTTTGAAGGC...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTGCTTACTGTCTTCCATaGGAGGCTAAAAACAGATGC +
Preference number: 4 (lower is better)
Translates to: TFNNHQVISTERHTQSRFAYCLP*EAKNRC
Trigger: GCATCTGTTTTTAGCCTCCCATGGAAGACAGTAAGC...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400546.6
CDS-3UTR TCA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTTACTACCCTCTGTGTTaGAATTATCTTCTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVYYPLC*NYLLSL
Trigger: CAAGGAGAGAAGATAATTTCAACACAGAGGGTAGTA...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACCATCTTCTCCTTGTTTaGATTCTTGTGGAGATACCA +
Preference number: 4 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYHLLLV*ILVEIP
Trigger: TGGTATCTCCACAAGAATTCAAACAAGGAGAAGATG...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTGCATTAAAAGATTTCTaGGGCATTGAGATTGCTGGC +
Preference number: 4 (lower is better)
Translates to: TFNNHQVISTERHTQSRFALKDF*GIEIAG
Trigger: GCCAGCAATCTCAATGCCTCAGAAATCTTTTAATGC...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTTTAAGCTGTATTATGTaGGGCTGTACAAAGACTTGG +
Preference number: 4 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVLSCIM*GCTKTW
Trigger: CCAAGTCTTTGTACAGCCTCACATAATACAGCTTAA...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTCATCACATACGAGTGTaGCTTGACCATTCTCATATG +
Preference number: 4 (lower is better)
Translates to: TFNNHQVISTERHTQSRFHHIRV*LDHSHM
Trigger: CATATGAGAATGGTCAAGTCACACTCGTATGTGATG...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTTCTTCTCCAGTGAATTaGTGCTGGTGGATTCGATTT +
Preference number: 4 (lower is better)
Translates to: TFNNHQVISTERHTQSRFSSPVN*CWWIRF
Trigger: AAATCGAATCCACCAGCATCAATTCACTGGAGAAGA...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp CCTTCAAACGAAGATGGTCATATTCTGTCCTGCTGTAGCCAGAAAAGTGATGAAAATTTTCCAGATTTCTaGCGCTACTTCTTTGACATC +
Preference number: 4 (lower is better)
Translates to: PSNEDGHILSCCSQKSDENFPDF*RYFFDI
Trigger: GATGTCAAAGAAGTAGCGTCAGAAATCTGGAAAATT...TTCATCACTTTTCTGGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGTTACAGCTGCAACCCTaGTTTCATAAGTTGTATTTG +
Preference number: 4 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKLQLQP*FHKLYL
Trigger: CAAATACAACTTATGAAATCAGGGTTGCAGCTGTAA...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTCACTATTGGTTCTTTTaGTCCATCTTTCAGGTATGC +
Preference number: 4 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVHYWFF*SIFQVC
Trigger: GCATACCTGAAAGATGGATCAAAAGAACCAATAGTG...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTTGTCCTGTCACTATTTaGGCTATAATACCACCTGAA +
Preference number: 4 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVCPVTI*AIIPPE
Trigger: TTCAGGTGGTATTATAGCTCAAATAGTGACAGGACA...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGAGTAAACATGCGAAATaGCTTTCTCAGTCATCGTAT +
Preference number: 4 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKSKHAK*LSQSSY
Trigger: ATACGATGACTGAGAAAGTCATTTCGCATGTTTACT...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTGAAATTCTCCAACAGTaGTGGTTTTGCTTACTGTCT +
Preference number: 4 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVEILQQ*WFCLLS
Trigger: AGACAGTAAGCAAAACCATCACTGTTGGAGAATTTC...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400546.6
CDS-3UTR GCA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTCTAACACCTTCCTTTTaGACTACTACCCTCTGTGTT +
Preference number: 4 (lower is better)
Translates to: TFNNHQVISTERHTQSRFLTPSF*TTTLCV
Trigger: AACACAGAGGGTAGTAGTGCAAAAGGAAGGTGTTAG...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR GCA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTCAATATCAAGGTACATaGTCTTTTGATGCCCTCCAA +
Preference number: 4 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVQYQGT*SFDALQ
Trigger: TTGGAGGGCATCAAAAGAGCATGTACCTTGATATTG...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR GCA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTCGAGTTCTTTACTTTTaGCACTGGAGCCACTTTTCT +
Preference number: 4 (lower is better)
Translates to: TFNNHQVISTERHTQSRFRVLYF*HWSHFS
Trigger: AGAAAAGTGGCTCCAGTGGCAAAAGTAAAGAACTCG...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR GCA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTTCCATCTTTCAGGTATaGAGCTTTTCCTTCTTCGAG +
Preference number: 4 (lower is better)
Translates to: TFNNHQVISTERHTQSRFSIFQV*SFSFFE
Trigger: CTCGAAGAAGGAAAAGCTGCATACCTGAAAGATGGA...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR GCA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACATACCAAAGTGTTGGTaGCAGTCAGTCTTGATATTG +
Preference number: 4 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYIPKCW*QSVLIL
Trigger: CAATATCAAGACTGACTGGCACCAACACTTTGGTAT...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR GCA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTATACCAAAGTGTTGGTaGCAGTCAGTCTTGATATTG +
Preference number: 4 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVIPKCW*QSVLIL
Trigger: CAATATCAAGACTGACTGGCACCAACACTTTGGTAT...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp CCTTCAAACGAAGATGGTCATATTCTGTCCTGCTGTAGCCAGAAAAGTGATGAAAATAATGTTGGGCTTTaGTGGCATGCTGAATTCATA +
Preference number: 4 (lower is better)
Translates to: PSNEDGHILSCCSQKSDENNVGL*WHAEFI
Trigger: TATGAATTCAGCATGCCACCAAAGCCCAACATTATT...TTCATCACTTTTCTGGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTATTTGGCTCATTTACTaGGCTCCCATCTTCGTGATT +
Preference number: 4 (lower is better)
Translates to: TFNNHQVISTERHTQSRFIWLIY*APIFVI
Trigger: AATCACGAAGATGGGAGCCCAGTAAATGAGCCAAAT...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACGTTCTGTCAGTGGTGTaGTTTCATTTGGCTCATTTA +
Preference number: 4 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYVLSVV*FHLAHL
Trigger: TAAATGAGCCAAATGAAACCACACCACTGACAGAAC...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGAATAACAAAAGGGAATaGATCATGGGCAGGAGTATT +
Preference number: 4 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKNNKRE*IMGRSI
Trigger: AATACTCCTGCCCATGATCCATTCCCTTTTGTTATT...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACAATTTTCCAGATTTCTaGCGCTACTTCTTTGACATC +
Preference number: 4 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYNFPDF*RYFFDI
Trigger: GATGTCAAAGAAGTAGCGTCAGAAATCTGGAAAATT...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTATGGGCAGGAGTATTTaGTCATATGTATATGTGTAC +
Preference number: 4 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVMGRSI*SYVYVY
Trigger: GTACACATATACATATGATCAAATACTCCTGCCCAT...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTAGCTATAATACCACCTaGAACACCAAAGGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: TFNNHQVISTERHTQSRFSYNTT*NTKGSE
Trigger: TTCAGAACCTTTGGTGTTTCAGGTGGTATTATAGCT...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTTGTCCTGTCACTATTTaGGCTATAATACCACCTGAA +
Preference number: 4 (lower is better)
Translates to: TFNNHQVISTERHTQSRFCPVTI*AIIPPE
Trigger: TTCAGGTGGTATTATAGCTCAAATAGTGACAGGACA...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR TCA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTAGTAAACATGCGAAATaGCTTTCTCAGTCATCGTAT +
Preference number: 4 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVSKHAK*LSQSSY
Trigger: ATACGATGACTGAGAAAGTCATTTCGCATGTTTACT...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR GCA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACCTTTCCATTTACAGCTaGAACCCTGATTTCATAAGT +
Preference number: 4 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYLSIYS*NPDFIS
Trigger: ACTTATGAAATCAGGGTTGCAGCTGTAAATGGAAAG...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR GCA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACAGCATTCATGGCTATTaGTTCATGGACACTTTACTA +
Preference number: 4 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYSIHGY*FMDTLL
Trigger: TAGTAAAGTGTCCATGAAGCAATAGCCATGAATGCT...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR GCA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACAATACAGATTGTCACTaGCTAATTGCACCTAACCTA +
Preference number: 4 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYNTDCH*LIAPNL
Trigger: TAGGTTAGGTGCAATTAGGCAGTGACAATCTGTATT...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400546.6
CDS-3UTR GCA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGGTTGATACATCCATATaGAATTTCAATGTGAGTGAC +
Preference number: 4 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKVDTSI*NFNVSD
Trigger: GTCACTCACATTGAAATTGCATATGGATGTATCAAC...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400546.6
CDS-3UTR CCA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTTTAGTTTTCTCTCCTTaGCTGAGTTTCAAGCACTTT +
Preference number: 4 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVLVFSP*LSFKHF
Trigger: AAAGTGCTTGAAACTCAGCCAAGGAGAGAAAACTAA...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR CAA 72 bp GAAGTTTCCCAAGAAATTAAGGTCAATGGAATAGTTTaGGTCATAGGGTCACGCAATCCAAATACTCTTCGT +
Preference number: 4 (lower is better)
Translates to: EVSQEIKVNGIV*VIGSRNPNTLR
Trigger: ACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCCATTGACCTTAATTTCTTGGGAAACTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTTTGTTTGAATTCTTGTaGAGATACCACTTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVLFEFL*RYHFSE
Trigger: TTCAGAGAAGTGGTATCTCCACAAGAATTCAAACAA...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTTTAGTTTTCTCTCCTTaGCTGAGTTTCAAGCACTTT +
Preference number: 4 (lower is better)
Translates to: TFNNHQVISTERHTQSRFLVFSP*LSFKHF
Trigger: AAAGTGCTTGAAACTCAGCCAAGGAGAGAAAACTAA...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CCA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACTTAGTATCAATAGAATaGCAATGTCTTAGCCCACAA +
Preference number: 4 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYLVSIE*QCLSPQ
Trigger: TTGTGGGCTAAGACATTGCCATTCTATTGATACTAA...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400546.6
CDS-3UTR GCA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTTATAGCAATTCAGTTTaGCTTTCTAGATCCACTCAT +
Preference number: 4 (lower is better)
Translates to: TFNNHQVISTERHTQSRFYSNSV*LSRSTH
Trigger: ATGAGTGGATCTAGAAAGGCAAACTGAATTGCTATA...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400546.6
CDS-3UTR CCA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTTTGTTTGAATTCTTGTaGAGATACCACTTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: TFNNHQVISTERHTQSRFLFEFL*RYHFSE
Trigger: TTCAGAGAAGTGGTATCTCCACAAGAATTCAAACAA...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
3UTR CAA 72 bp CATAATAAATTCCAGTACTTCAGTCATAGAATCAAATaGAATACCAAAGTGTTGGTGCCAGTCAGTCTTGAT +
Preference number: 4 (lower is better)
Translates to: HNKFQYFSHRIK*NTKVLVPVSLD
Trigger: ATCAAGACTGACTGGCACCAACACTTTGGTATTCAATTTGATTCTATGACTGAAGTACTGGAATTTATTATG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS CCA 90 bp TTCAGTGAACGTGAAGCCATCCACAGCTCTTTTCCAAGTGATTTCTaGAATAGGCTCCCCTTCCGCATCACATACGAGTGTGACTTGACC +
Preference number: 5 (lower is better)
Translates to: FSEREAIHSSFPSDF*NRLPFRITYECDLT
Trigger: GGTCAAGTCACACTCGTATGTGATGCGGAAGGGGAGCCTATTCCAGAAATCACTTGGAAAAGAGCTGTGGATGGCTTCACGTTCACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS TCA 90 bp GGTGACTTCCTCATTATGATACAACCAGCTGACAGCAGGTGCAGGTaGACTGCTAACTCGGCAAACCACTTCTGCATCTTCTCCTTGTTT +
Preference number: 5 (lower is better)
Translates to: GDFLIMIQPADSRCR*TANSANHFCIFSLF
Trigger: AAACAAGGAGAAGATGCAGAAGTGGTTTGCCGAGTTAGCAGTTCACCTGCACCTGCTGTCAGCTGGTTGTATCATAATGAGGAAGTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284894.8
ENST00000400546.6
ENST00000486367.1
CDS GCA 90 bp TCTGACAACTTCACATCTTTAATATGCAGTGATGAGCTTCCATGCTaGCCTTTGACTTCGATACGGCCGTCCAGGCTCTTATCGCCTTCA +
Preference number: 5 (lower is better)
Translates to: SDNFTSLICSDELPC*PLTSIRPSRLLSPS
Trigger: TGAAGGCGATAAGAGCCTGGACGGCCGTATCGAAGTCAAAGGGCAGCATGGAAGCTCATCACTGCATATTAAAGATGTGAAGTTGTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS GCA 90 bp GAATCTGACAACTTCACATCTTTAATATGCAGTGATGAGCTTCCATaGTGCCCTTTGACTTCGATACGGCCGTCCAGGCTCTTATCGCCT +
Preference number: 5 (lower is better)
Translates to: ESDNFTSLICSDELP*CPLTSIRPSRLLSP
Trigger: AGGCGATAAGAGCCTGGACGGCCGTATCGAAGTCAAAGGGCAGCATGGAAGCTCATCACTGCATATTAAAGATGTGAAGTTGTCAGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAAGCCCTCCAATTCTGCTaGCAGCTTCACAGTCATATC +
Preference number: 5 (lower is better)
Translates to: AFNPATYGKDTATIWCLQALQFC*QLHSHI
Trigger: GATATGACTGTGAAGCTGCAAGCAGAATTGGAGGGC...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp CCTTCAAACGAAGATGGTCATATTCTGTCCTGCTGTAGCCAGAAAAGTGATGAATTGTTGAAGGAAACCTaGGCCGTGGTCTGCGACAGC +
Preference number: 5 (lower is better)
Translates to: PSNEDGHILSCCSQKSDELLKET*AVVCDS
Trigger: GCTGTCGCAGACCACGGCCAAGGTTTCCTTCAACAA...TTCATCACTTTTCTGGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGTGGGAGTCCGGTTTGTaGAAGGAAACCTTGGCCGTG +
Preference number: 5 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKWESGL*KETLAV
Trigger: CACGGCCAAGGTTTCCTTCAACAAACCGGACTCCCA...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp CCTTCAAACGAAGATGGTCATATTCTGTCCTGCTGTAGCCAGAAAAGTGATGAACCATGGGAGTCCGGTTaGTTGAAGGAAACCTTGGCC +
Preference number: 5 (lower is better)
Translates to: PSNEDGHILSCCSQKSDEPWESG*LKETLA
Trigger: GGCCAAGGTTTCCTTCAACAAACCGGACTCCCATGG...TTCATCACTTTTCTGGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTCTTCCATGCTGCCCTTaGACTTCGATACGGCCGTCC +
Preference number: 5 (lower is better)
Translates to: TFNNHQVISTERHTQSRFLPCCP*TSIRPS
Trigger: GGACGGCCGTATCGAAGTCAAAGGGCAGCATGGAAG...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTTTGTTGAAGGAAACCTaGGCCGTGGTCTGCGACAGC +
Preference number: 5 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVLLKET*AVVCDS
Trigger: GCTGTCGCAGACCACGGCCAAGGTTTCCTTCAACAA...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACTGGGAGTCCGGTTTGTaGAAGGAAACCTTGGCCGTG +
Preference number: 5 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYWESGL*KETLAV
Trigger: CACGGCCAAGGTTTCCTTCAACAAACCGGACTCCCA...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAATTTGGCATCTGTTGCTaGACAACGATATATCCCTGC +
Preference number: 5 (lower is better)
Translates to: AFNPATYGKDTATIWCLQFGICC*TTIYPC
Trigger: GCAGGGATATATCGTTGTCAAGCAACAGATGCCAAA...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAAGGACCACCATCACTATaGATTATGTTCCTGACAGTG +
Preference number: 5 (lower is better)
Translates to: AFNPATYGKDTATIWCLQGPPSL*IMFLTV
Trigger: CACTGTCAGGAACATAATCAATAGTGATGGTGGTCC...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp CCTTCAAACGAAGATGGTCATATTCTGTCCTGCTGTAGCCAGAAAAGTGATGAACTTCTCCTGCCTTATTaGTGGCCCTGCAGACATAAG +
Preference number: 5 (lower is better)
Translates to: PSNEDGHILSCCSQKSDELLLPY*WPCRHK
Trigger: CTTATGTCTGCAGGGCCACAAATAAGGCAGGAGAAG...TTCATCACTTTTCTGGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGCTTCTCCTGCCTTATTaGTGGCCCTGCAGACATAAG +
Preference number: 5 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKLLLPY*WPCRHK
Trigger: CTTATGTCTGCAGGGCCACAAATAAGGCAGGAGAAG...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAACTCTTCTCCAGTGAATaGATGCTGGTGGATTCGATT +
Preference number: 5 (lower is better)
Translates to: AFNPATYGKDTATIWCLQLFSSE*MLVDSI
Trigger: AATCGAATCCACCAGCATCAATTCACTGGAGAAGAG...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAACAAAACAACCATTGTTaGAACTCCATGGGAGCGTAC +
Preference number: 5 (lower is better)
Translates to: AFNPATYGKDTATIWCLQQNNHC*NSMGAY
Trigger: GTACGCTCCCATGGAGTTCAAACAATGGTTGTTTTG...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp CCTTCAAACGAAGATGGTCATATTCTGTCCTGCTGTAGCCAGAAAAGTGATGAAAGCTCTTTCCACTGCTaGGCTGTCCATGTATGGATG +
Preference number: 5 (lower is better)
Translates to: PSNEDGHILSCCSQKSDESSFHC*AVHVWM
Trigger: CATCCATACATGGACAGCCAAGCAGTGGAAAGAGCT...TTCATCACTTTTCTGGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAATCGAGTTCTTTACTTTaGCCACTGGAGCCACTTTTC +
Preference number: 5 (lower is better)
Translates to: AFNPATYGKDTATIWCLQSSSLL*PLEPLF
Trigger: GAAAAGTGGCTCCAGTGGCAAAAGTAAAGAACTCGA...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGGTGGTGTGGTTTCATTaGGCTCATTTACTGGGCTCC +
Preference number: 5 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKVVWFH*AHLLGS
Trigger: GGAGCCCAGTAAATGAGCCAAATGAAACCACACCAC...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp CCTTCAAACGAAGATGGTCATATTCTGTCCTGCTGTAGCCAGAAAAGTGATGAACACTTGAAGAAGAGCTaGCCCGCTACTGACAAGCAA +
Preference number: 5 (lower is better)
Translates to: PSNEDGHILSCCSQKSDEHLKKS*PATDKQ
Trigger: TTGCTTGTCAGTAGCGGGCAAGCTCTTCTTCAAGTG...TTCATCACTTTTCTGGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400546.6
CDS-3UTR CAA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAATATCACAGTATTGCCTaGCTTCAGCATGGCATGGAT +
Preference number: 5 (lower is better)
Translates to: AFNPATYGKDTATIWCLQYHSIA*LQHGMD
Trigger: ATCCATGCCATGCTGAAGCAAGGCAATACTGTGATA...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400546.6
CDS GCA 90 bp TTCTTTCCACACATTCTCCTAGTGATGCACATCAGCAACCCACATTaGCGAATAAAGAAGCAGCTGACGTCTGTTACCACAAGAATTAGC +
Preference number: 5 (lower is better)
Translates to: FFPHILLVMHISNPH*RIKKQLTSVTTRIS
Trigger: GCTAATTCTTGTGGTAACAGACGTCAGCTGCTTCTTTATTCGGCAATGTGGGTTGCTGATGTGCATCACTAGGAGAATGTGTGGAAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGAAGATTTCTGAGGCATaGAGATTGCTGGCGGCACAT +
Preference number: 5 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKKISEA*RLLAAH
Trigger: ATGTGCCGCCAGCAATCTCAATGCCTCAGAAATCTT...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAATGTTCAAAACAACCATaGTTTGAACTCCATGGGAGC +
Preference number: 5 (lower is better)
Translates to: AFNPATYGKDTATIWCLQCSKQP*FELHGS
Trigger: GCTCCCATGGAGTTCAAACAATGGTTGTTTTGAACA...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGCCAACAGTGATGGTTTaGCTTACTGTCTTCCATGGG +
Preference number: 5 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKPTVMV*LTVFHG
Trigger: CCCATGGAAGACAGTAAGCAAAACCATCACTGTTGG...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400546.6
CDS-3UTR CAA 90 bp CCTTCAAACGAAGATGGTCATATTCTGTCCTGCTGTAGCCAGAAAAGTGATGAAAACATAGCGAACCGATaGTCGGAAATAGTGGTGACT +
Preference number: 5 (lower is better)
Translates to: PSNEDGHILSCCSQKSDENIANR*SEIVVT
Trigger: AGTCACCACTATTTCCGACAATCGGTTCGCTATGTT...TTCATCACTTTTCTGGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAAAGAATCTGCAGGTTATaGTTTGCTAACATAGCGAAC +
Preference number: 5 (lower is better)
Translates to: AFNPATYGKDTATIWCLQRICRL*FANIAN
Trigger: GTTCGCTATGTTAGCAAACAATAACCTGCAGATTCT...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGTTTTCTTCAATGAGCTaGCCATTCCTGAACCAGGAG +
Preference number: 5 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKFSSMS*PFLNQE
Trigger: CTCCTGGTTCAGGAATGGCAAGCTCATTGAAGAAAA...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp CCTTCAAACGAAGATGGTCATATTCTGTCCTGCTGTAGCCAGAAAAGTGATGAATTTTCTTCAATGAGCTaGCCATTCCTGAACCAGGAG +
Preference number: 5 (lower is better)
Translates to: PSNEDGHILSCCSQKSDEFSSMS*PFLNQE
Trigger: CTCCTGGTTCAGGAATGGCAAGCTCATTGAAGAAAA...TTCATCACTTTTCTGGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp CCTTCAAACGAAGATGGTCATATTCTGTCCTGCTGTAGCCAGAAAAGTGATGAAAAGGTACATGCTCTTTaGATGCCCTCCAATTCTGCT +
Preference number: 5 (lower is better)
Translates to: PSNEDGHILSCCSQKSDEKVHAL*MPSNSA
Trigger: AGCAGAATTGGAGGGCATCAAAAGAGCATGTACCTT...TTCATCACTTTTCTGGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACCCTCCATCGTCCTGTTaGGTGATGCTGAGTTTAAAG +
Preference number: 5 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYPPSSC*VMLSLK
Trigger: CTTTAAACTCAGCATCACCAAACAGGACGATGGAGG...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGGTGTCTTTAATAATGTaGGGCTTTGGTGGCATGCTG +
Preference number: 5 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKVSLIM*GFGGML
Trigger: CAGCATGCCACCAAAGCCCAACATTATTAAAGACAC...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGTCGAGTTCTTTACTTTaGCCACTGGAGCCACTTTTC +
Preference number: 5 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKSSSLL*PLEPLF
Trigger: GAAAAGTGGCTCCAGTGGCAAAAGTAAAGAACTCGA...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTGTGGTGTGGTTTCATTaGGCTCATTTACTGGGCTCC +
Preference number: 5 (lower is better)
Translates to: TFNNHQVISTERHTQSRFVVWFH*AHLLGS
Trigger: GGAGCCCAGTAAATGAGCCAAATGAAACCACACCAC...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACAAGATAACTGGCTCTTaGACGCCTACGTTCCCTGAA +
Preference number: 5 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYKITGS*TPTFPE
Trigger: TTCAGGGAACGTAGGCGTCAAAGAGCCAGTTATCTT...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTAAGATAACTGGCTCTTaGACGCCTACGTTCCCTGAA +
Preference number: 5 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVKITGS*TPTFPE
Trigger: TTCAGGGAACGTAGGCGTCAAAGAGCCAGTTATCTT...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGATTACCTCTGGGAGCTaGCATAGCTTGGAAGTAAAG +
Preference number: 5 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKITSGS*HSLEVK
Trigger: CTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAAT...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTAGACACTGCGACGATTaGGTGCCTTCAAACGAAGAT +
Preference number: 5 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVRHCDD*VPSNED
Trigger: ATCTTCGTTTGAAGGCACCAAATCGTCGCAGTGTCT...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS CCA 90 bp TTTTTCAGGTTCTGTCAGTGGTGTGGTTTCATTTGGCTCATTTACTaGGCTCCCATCTTCGTGATTAGTAACTCTTTCATCCTCTGTTCT +
Preference number: 5 (lower is better)
Translates to: FFRFCQWCGFIWLIY*APIFVISNSFILCS
Trigger: AGAACAGAGGATGAAAGAGTTACTAATCACGAAGATGGGAGCCCAGTAAATGAGCCAAATGAAACCACACCACTGACAGAACCTGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAAACACTAAGCTCTACTTaGCTAAGTGAAATTGTCACT +
Preference number: 5 (lower is better)
Translates to: AFNPATYGKDTATIWCLQTLSST*LSEIVT
Trigger: AGTGACAATTTCACTTAGCAAAGTAGAGCTTAGTGT...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTCCTAACACCTTCCTTTaGCACTACTACCCTCTGTGT +
Preference number: 5 (lower is better)
Translates to: TFNNHQVISTERHTQSRFPNTFL*HYYPLC
Trigger: ACACAGAGGGTAGTAGTGCAAAAGGAAGGTGTTAGG...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTGTCCTTTGGCATCTGTaGCTTGACAACGATATATCC +
Preference number: 5 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVVLWHL*LDNDIS
Trigger: GGATATATCGTTGTCAAGCAACAGATGCCAAAGGAC...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTAAGATTTCTGAGGCATaGAGATTGCTGGCGGCACAT +
Preference number: 5 (lower is better)
Translates to: TFNNHQVISTERHTQSRFKISEA*RLLAAH
Trigger: ATGTGCCGCCAGCAATCTCAATGCCTCAGAAATCTT...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACGGACCACCATCACTATaGATTATGTTCCTGACAGTG +
Preference number: 5 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYGPPSL*IMFLTV
Trigger: CACTGTCAGGAACATAATCAATAGTGATGGTGGTCC...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTCAAAACAACCATTGTTaGAACTCCATGGGAGCGTAC +
Preference number: 5 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVQNNHC*NSMGAY
Trigger: GTACGCTCCCATGGAGTTCAAACAATGGTTGTTTTG...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTGTATGGATGGAGGACTaGGTTCACGAACTGGTAATG +
Preference number: 5 (lower is better)
Translates to: TFNNHQVISTERHTQSRFVWMED*VHELVM
Trigger: CATTACCAGTTCGTGAACCAAGTCCTCCATCCATAC...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTCCTCCATCGTCCTGTTaGGTGATGCTGAGTTTAAAG +
Preference number: 5 (lower is better)
Translates to: TFNNHQVISTERHTQSRFPPSSC*VMLSLK
Trigger: CTTTAAACTCAGCATCACCAAACAGGACGATGGAGG...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTGTGTCTTTAATAATGTaGGGCTTTGGTGGCATGCTG +
Preference number: 5 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVVSLIM*GFGGML
Trigger: CAGCATGCCACCAAAGCCCAACATTATTAAAGACAC...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTCATCAGCAACCCACATaGCCGAATAAAGAAGCAGCT +
Preference number: 5 (lower is better)
Translates to: TFNNHQVISTERHTQSRFHQQPT*PNKEAA
Trigger: AGCTGCTTCTTTATTCGGCAATGTGGGTTGCTGATG...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAATTCTCATCTCCACTATaGGTTCTTTTGATCCATCTT +
Preference number: 5 (lower is better)
Translates to: AFNPATYGKDTATIWCLQFSSPL*VLLIHL
Trigger: AAGATGGATCAAAAGAACCAATAGTGGAGATGAGAA...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGGTCAATGGAATAGTTTaGGTCATAGGGTCACGCAAT +
Preference number: 5 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKVNGIV*VIGSRN
Trigger: ATTGCGTGACCCTATGACCAAAACTATTCCATTGAC...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp CCTTCAAACGAAGATGGTCATATTCTGTCCTGCTGTAGCCAGAAAAGTGATGAATTGAATACCAAAGTGTaGGTGCCAGTCAGTCTTGAT +
Preference number: 5 (lower is better)
Translates to: PSNEDGHILSCCSQKSDELNTKV*VPVSLD
Trigger: ATCAAGACTGACTGGCACCAACACTTTGGTATTCAA...TTCATCACTTTTCTGGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp GCATTTAACCCTGCAACTTATGGCAAAGACACTGCGACGATTTGGTGCCTTCAATCCTTCATCTTGAAGTaGAAAGCCACTTTAAGAATC +
Preference number: 5 (lower is better)
Translates to: AFNPATYGKDTATIWCLQSFILK*KATLRI
Trigger: GATTCTTAAAGTGGCTTTCAACTTCAAGATGAAGGA...TTGAAGGCACCAAATCGTCGCAGTGTCTTTGCCATAAGTTGCAGGGTTAAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACATTACCTCTGGGAGCTaGCATAGCTTGGAAGTAAAG +
Preference number: 5 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYITSGS*HSLEVK
Trigger: CTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAAT...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGGGCCTAAGGAAACCTTaGGCTCTCAAGGTTAATAAA +
Preference number: 5 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKGLRKP*ALKVNK
Trigger: TTTATTAACCTTGAGAGCCAAAGGTTTCCTTAGGCC...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS TCA 90 bp AACCATTGTTTGAACTCCATGGGAGCGTACAATTTTCCAGATTTCTaGCGCTACTTCTTTGACATCCACCTGATAGTGATGAATAGGTAC +
Preference number: 5 (lower is better)
Translates to: NHCLNSMGAYNFPDF*RYFFDIHLIVMNRY
Trigger: GTACCTATTCATCACTATCAGGTGGATGTCAAAGAAGTAGCGTCAGAAATCTGGAAAATTGTACGCTCCCATGGAGTTCAAACAATGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTGTCCTTTGGCATCTGTaGCTTGACAACGATATATCC +
Preference number: 5 (lower is better)
Translates to: TFNNHQVISTERHTQSRFVLWHL*LDNDIS
Trigger: GGATATATCGTTGTCAAGCAACAGATGCCAAAGGAC...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACAACTACTGTAGCTTCTaGTGTTTGTCCTTTGGCATC +
Preference number: 5 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYNYCSF*CLSFGI
Trigger: GATGCCAAAGGACAAACACAAGAAGCTACAGTAGTT...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACGCATCTTCTCCTTGTTaGAATTCTTGTGGAGATACC +
Preference number: 5 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYASSPC*NSCGDT
Trigger: GGTATCTCCACAAGAATTCAAACAAGGAGAAGATGC...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGTTCTGCATCTTCTCCTaGTTTGAATTCTTGTGGAGA +
Preference number: 5 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKFCIFS*FEFLWR
Trigger: TCTCCACAAGAATTCAAACAAGGAGAAGATGCAGAA...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTAAGGTACATGCTCTTTaGATGCCCTCCAATTCTGCT +
Preference number: 5 (lower is better)
Translates to: TFNNHQVISTERHTQSRFKVHAL*MPSNSA
Trigger: AGCAGAATTGGAGGGCATCAAAAGAGCATGTACCTT...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTCTCTTCTCCAGTGAATaGATGCTGGTGGATTCGATT +
Preference number: 5 (lower is better)
Translates to: TFNNHQVISTERHTQSRFLFSSE*MLVDSI
Trigger: AATCGAATCCACCAGCATCAATTCACTGGAGAAGAG...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACTGTTCAAAACAACCATaGTTTGAACTCCATGGGAGC +
Preference number: 5 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYCSKQP*FELHGS
Trigger: GCTCCCATGGAGTTCAAACAATGGTTGTTTTGAACA...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTTTGAATACCAAAGTGTaGGTGCCAGTCAGTCTTGAT +
Preference number: 5 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVLNTKV*VPVSLD
Trigger: ATCAAGACTGACTGGCACCAACACTTTGGTATTCAA...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTGGGAGCTTGCATAGCTaGGAAGTAAAGAAGCATTTT +
Preference number: 5 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVGSLHS*EVKKHF
Trigger: AAAATGCTTCTTTACTTCCAAGCTATGCAAGCTCCC...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACGGGAGCTTGCATAGCTaGGAAGTAAAGAAGCATTTT +
Preference number: 5 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYGSLHS*EVKKHF
Trigger: AAAATGCTTCTTTACTTCCAAGCTATGCAAGCTCCC...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTGGCCTAAGGAAACCTTaGGCTCTCAAGGTTAATAAA +
Preference number: 5 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVGLRKP*ALKVNK
Trigger: TTTATTAACCTTGAGAGCCAAAGGTTTCCTTAGGCC...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACTACTTTATCACAGTATaGCCTTGCTTCAGCATGGCA +
Preference number: 5 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYYFITV*PCFSMA
Trigger: TGCCATGCTGAAGCAAGGCAATACTGTGATAAAGTA...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400546.6
CDS-3UTR CAA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTGTTGTTGAATACAGATaGTCACTGCCTAATTGCACC +
Preference number: 5 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVVVEYR*SLPNCT
Trigger: GGTGCAATTAGGCAGTGACAATCTGTATTCAACAAC...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400546.6
CDS-3UTR CAA 90 bp CCTTCAAACGAAGATGGTCATATTCTGTCCTGCTGTAGCCAGAAAAGTGATGAAATGTCGGGTTGTGATTaGAAATTCTCCAACAGTGAT +
Preference number: 5 (lower is better)
Translates to: PSNEDGHILSCCSQKSDEMSGCD*KFSNSD
Trigger: ATCACTGTTGGAGAATTTCAAATCACAACCCGACAT...TTCATCACTTTTCTGGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400546.6
CDS-3UTR CAA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGACACTAAGCTCTACTTaGCTAAGTGAAATTGTCACT +
Preference number: 5 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKTLSST*LSEIVT
Trigger: AGTGACAATTTCACTTAGCAAAGTAGAGCTTAGTGT...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGCTGCATCTTCTATATTaGCATTGTAGATGGTTAACC +
Preference number: 5 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKLHLLY*HCRWLT
Trigger: GGTTAACCATCTACAATGCAAATATAGAAGATGCAG...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTAACTACTGTAGCTTCTaGTGTTTGTCCTTTGGCATC +
Preference number: 5 (lower is better)
Translates to: TFNNHQVISTERHTQSRFNYCSF*CLSFGI
Trigger: GATGCCAAAGGACAAACACAAGAAGCTACAGTAGTT...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTGCATCTTCTCCTTGTTaGAATTCTTGTGGAGATACC +
Preference number: 5 (lower is better)
Translates to: TFNNHQVISTERHTQSRFASSPC*NSCGDT
Trigger: GGTATCTCCACAAGAATTCAAACAAGGAGAAGATGC...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACCCTTCATCACTTTTATaGATGTTGAGAATCTGCAGG +
Preference number: 5 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYPSSLL*MLRICR
Trigger: CCTGCAGATTCTCAACATCAATAAAAGTGATGAAGG...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTACAGTGAGTTCTGTATaGCTCCCTTTCAATATGTAC +
Preference number: 5 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVTVSSV*LPFNMY
Trigger: GTACATATTGAAAGGGAGCAATACAGAACTCACTGT...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACACAGTGAGTTCTGTATaGCTCCCTTTCAATATGTAC +
Preference number: 5 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYTVSSV*LPFNMY
Trigger: GTACATATTGAAAGGGAGCAATACAGAACTCACTGT...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTCCACTATTGGTTCTTTaGATCCATCTTTCAGGTATG +
Preference number: 5 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVPLLVL*IHLSGM
Trigger: CATACCTGAAAGATGGATCAAAAGAACCAATAGTGG...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGTTCTCATCTCCACTATaGGTTCTTTTGATCCATCTT +
Preference number: 5 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKFSSPL*VLLIHL
Trigger: AAGATGGATCAAAAGAACCAATAGTGGAGATGAGAA...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGTGGTGCCAGTCAGTCTaGATATTGAAATTCTTAACA +
Preference number: 5 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKWCQSV*ILKFLT
Trigger: TGTTAAGAATTTCAATATCAAGACTGACTGGCACCA...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp ATCATGTGTCACTCTATTACCTCTGGGAGCTTGCATAGCTTGGAAGTAAAGAAGTTAAGCTCCTTCATCTaGAAGTTGAAAGCCACTTTA +
Preference number: 5 (lower is better)
Translates to: IMCHSITSGSLHSLEVKKLSSFI*KLKATL
Trigger: TAAAGTGGCTTTCAACTTCAAGATGAAGGAGCTTAA...CTTCTTTACTTCCAAGCTATGCAAGCTCCCAGAGGTAATAGAGTGACACATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp CCTTCAAACGAAGATGGTCATATTCTGTCCTGCTGTAGCCAGAAAAGTGATGAAGACACTTTACTAAGCTaGTACACTTTGCACAAACAA +
Preference number: 5 (lower is better)
Translates to: PSNEDGHILSCCSQKSDEDTLLS*YTLHKQ
Trigger: TTGTTTGTGCAAAGTGTACAAGCTTAGTAAAGTGTC...TTCATCACTTTTCTGGCTACAGCAGGACAGAATATGACCATCTTCGTTTGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS TCA 90 bp AATGTCATTTCTTCTCCTCTCTCTGCTGTGGCATTAAAAGATTTCTaGGGCATTGAGATTGCTGGCGGCACATTAACAATAACAATGATA +
Preference number: 5 (lower is better)
Translates to: NVISSPLSAVALKDF*GIEIAGGTLTITMI
Trigger: TATCATTGTTATTGTTAATGTGCCGCCAGCAATCTCAATGCCTCAGAAATCTTTTAATGCCACAGCAGAGAGAGGAGAAGAAATGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284894.8
ENST00000400546.6
ENST00000461281.1
CDS TCA 90 bp TTTTACTGTAGTCTCCTTGTCCCTTTCCATTTACAGCTGCAACCCTaGTTTCATAAGTTGTATTTGGTTCCAGGTTGTTCAAAACAACCA +
Preference number: 5 (lower is better)
Translates to: FYCSLLVPFHLQLQP*FHKLYLVPGCSKQP
Trigger: TGGTTGTTTTGAACAACCTGGAACCAAATACAACTTATGAAATCAGGGTTGCAGCTGTAAATGGAAAGGGACAAGGAGACTACAGTAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284894.8
ENST00000400546.6
ENST00000484983.1
CDS CCA 90 bp AACTCGGCAAACCACTTCTGCATCTTCTCCTTGTTTGAATTCTTGTaGAGATACCACTTCTCTGAAAGTGAGTTTTTGGTAAATTTCCAA +
Preference number: 5 (lower is better)
Translates to: NSANHFCIFSLFEFL*RYHFSESEFLVNFQ
Trigger: TTGGAAATTTACCAAAAACTCACTTTCAGAGAAGTGGTATCTCCACAAGAATTCAAACAAGGAGAAGATGCAGAAGTGGTTTGCCGAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284894.8
ENST00000400546.6
ENST00000486367.1
CDS-3UTR CAA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTTTCTGCATCTTCTCCTaGTTTGAATTCTTGTGGAGA +
Preference number: 5 (lower is better)
Translates to: TFNNHQVISTERHTQSRFFCIFS*FEFLWR
Trigger: TCTCCACAAGAATTCAAACAAGGAGAAGATGCAGAA...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTCCTTCATCACTTTTATaGATGTTGAGAATCTGCAGG +
Preference number: 5 (lower is better)
Translates to: TFNNHQVISTERHTQSRFPSSLL*MLRICR
Trigger: CCTGCAGATTCTCAACATCAATAAAAGTGATGAAGG...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp GGAATAGTTTTGGTCATAGGGTCACGCAATCCAAATACTCTTCGTAGTGTTGTTCATGGGCAGGAGTATTaGATCATATGTATATGTGTA +
Preference number: 5 (lower is better)
Translates to: GIVLVIGSRNPNTLRSVVHGQEY*IICICV
Trigger: TACACATATACATATGATCAAATACTCCTGCCCATG...AACAACACTACGAAGAGTATTTGGATTGCGTGACCCTATGACCAAAACTATTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp TTTAAGAATCTATTTGCCCAGAATAGGACTCATACACATGCAGGGCCTTCTTACGACACTTTACTAAGCTaGTACACTTTGCACAAACAA +
Preference number: 5 (lower is better)
Translates to: FKNLFAQNRTHTHAGPSYDTLLS*YTLHKQ
Trigger: TTGTTTGTGCAAAGTGTACAAGCTTAGTAAAGTGTC...GTAAGAAGGCCCTGCATGTGTATGAGTCCTATTCTGGGCAAATAGATTCTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS GCA 90 bp TTCCAAAACTACTGTAGCTTCTTGTGTTTGTCCTTTGGCATCTGTTaGTTGACAACGATATATCCCTGCATCTTCTATATTTGCATTGTA +
Preference number: 5 (lower is better)
Translates to: FQNYCSFLCLSFGIC*LTTIYPCIFYICIV
Trigger: TACAATGCAAATATAGAAGATGCAGGGATATATCGTTGTCAAGCAACAGATGCCAAAGGACAAACACAAGAAGCTACAGTAGTTTTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284894.8
ENST00000400546.6
ENST00000486367.1
CDS GCA 90 bp GATTTCTATTTTACTGTAGTCTCCTTGTCCCTTTCCATTTACAGCTaGAACCCTGATTTCATAAGTTGTATTTGGTTCCAGGTTGTTCAA +
Preference number: 5 (lower is better)
Translates to: DFYFTVVSLSLSIYS*NPDFISCIWFQVVQ
Trigger: TTGAACAACCTGGAACCAAATACAACTTATGAAATCAGGGTTGCAGCTGTAAATGGAAAGGGACAAGGAGACTACAGTAAAATAGAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284894.8
ENST00000400546.6
ENST00000484983.1
CDS-3UTR CAA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTCATGGGCAGGAGTATTaGATCATATGTATATGTGTA +
Preference number: 5 (lower is better)
Translates to: TFNNHQVISTERHTQSRFHGQEY*IICICV
Trigger: TACACATATACATATGATCAAATACTCCTGCCCATG...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTTGGTGCCAGTCAGTCTaGATATTGAAATTCTTAACA +
Preference number: 5 (lower is better)
Translates to: TFNNHQVISTERHTQSRFWCQSV*ILKFLT
Trigger: TGTTAAGAATTTCAATATCAAGACTGACTGGCACCA...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTTCCTTCATCTTGAAGTaGAAAGCCACTTTAAGAATC +
Preference number: 5 (lower is better)
Translates to: TFNNHQVISTERHTQSRFSFILK*KATLRI
Trigger: GATTCTTAAAGTGGCTTTCAACTTCAAGATGAAGGA...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS-3UTR CAA 90 bp ACATTTAATAATCATCAGGTTATCTCTACAGAGAGACACACCCAGAGCAGGTTTAAATGGGTAACAATTTaGATCTGGCACTTCAGTCTA +
Preference number: 5 (lower is better)
Translates to: TFNNHQVISTERHTQSRFKWVTI*IWHFSL
Trigger: TAGACTGAAGTGCCAGATCAAAATTGTTACCCATTT...AAACCTGCTCTGGGTGTGTCTCTCTGTAGAGATAACCTGATGATTATTAAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS TCA 90 bp TTGGTCGTGTTTTTAGCAGGTAAGACTAATTTATCTCTTCTCCAGTaGATTGATGCTGGTGGATTCGATTTCACATCACAACTTATATTG +
Preference number: 5 (lower is better)
Translates to: LVVFLAGKTNLSLLQ*IDAGGFDFTSQLIL
Trigger: CAATATAAGTTGTGATGTGAAATCGAATCCACCAGCATCAATTCACTGGAGAAGAGATAAATTAGTCTTACCTGCTAAAAACACGACCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS TCA 90 bp TGTGAAGAATTTAGATTCTCCAACACTAAGCTCTACTTTGCTAAGTaGAATTGTCACTTGAAGAAGAGCCTATATATAGATGATGGGCAT +
Preference number: 5 (lower is better)
Translates to: CEEFRFSNTKLYFAK*NCHLKKSLYIDDGH
Trigger: ATGCCCATCATCTATATATAGGCTCTTCTTCAAGTGACAATTTCACTTAGCAAAGTAGAGCTTAGTGTTGGAGAATCTAAATTCTTCACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486367.1
CDS TCA 72 bp ATTCCTGAACCAGGAGATGGCGGGTTCTGGAGAGCCTaGGGCCCTGCAGGAAAATGTCATTTCTTCTCCTCT +
Preference number: 6 (lower is better)
Translates to: IPEPGDGGFWRA*GPAGKCHFFSS
Trigger: AGAGGAGAAGAAATGACATTTTCCTGCAGGGCCTCAGGCTCTCCAGAACCCGCCATCTCCTGGTTCAGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284894.8
ENST00000400546.6
ENST00000461281.1
CDS CAA 72 bp ACACCTCCATGGGAGTCCGGTTTGTTGAAGGAAACCTaGGCCGTGGTCTGCGACAGCTCTATGATCTTCACT +
Preference number: 6 (lower is better)
Translates to: TPPWESGLLKET*AVVCDSSMIFT
Trigger: AGTGAAGATCATAGAGCTGTCGCAGACCACGGCCAAGGTTTCCTTCAACAAACCGGACTCCCATGGAGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS CAA 72 bp TCTTTAATATGCAGTGATGAGCTTCCATGCTGCCCTTaGACTTCGATACGGCCGTCCAGGCTCTTATCGCCT +
Preference number: 6 (lower is better)
Translates to: SLICSDELPCCP*TSIRPSRLLSP
Trigger: AGGCGATAAGAGCCTGGACGGCCGTATCGAAGTCAAAGGGCAGCATGGAAGCTCATCACTGCATATTAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS TCA 72 bp CTCATTATGATACAACCAGCTGACAGCAGGTGCAGGTaGACTGCTAACTCGGCAAACCACTTCTGCATCTTC +
Preference number: 6 (lower is better)
Translates to: LIMIQPADSRCR*TANSANHFCIF
Trigger: GAAGATGCAGAAGTGGTTTGCCGAGTTAGCAGTTCACCTGCACCTGCTGTCAGCTGGTTGTATCATAATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284894.8
ENST00000400546.6
ENST00000486367.1
CDS GCA 72 bp AACTTCACATCTTTAATATGCAGTGATGAGCTTCCATaGTGCCCTTTGACTTCGATACGGCCGTCCAGGCTC +
Preference number: 6 (lower is better)
Translates to: NFTSLICSDELP*CPLTSIRPSRL
Trigger: GAGCCTGGACGGCCGTATCGAAGTCAAAGGGCAGCATGGAAGCTCATCACTGCATATTAAAGATGTGAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS CAA 90 bp AACTTCACATCTTTAATATGCAGTGATGAGCTTCCATGCTGCCCTTaGACTTCGATACGGCCGTCCAGGCTCTTATCGCCTTCAGTGAAC +
Preference number: 6 (lower is better)
Translates to: NFTSLICSDELPCCP*TSIRPSRLLSPSVN
Trigger: GTTCACTGAAGGCGATAAGAGCCTGGACGGCCGTATCGAAGTCAAAGGGCAGCATGGAAGCTCATCACTGCATATTAAAGATGTGAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS TCA 72 bp AACCGATTGTCGGAAATAGTGGTGACTTCCTCATTATaGTACAACCAGCTGACAGCAGGTGCAGGTGAACTG +
Preference number: 6 (lower is better)
Translates to: NRLSEIVVTSSL*YNQLTAGAGEL
Trigger: CAGTTCACCTGCACCTGCTGTCAGCTGGTTGTATCATAATGAGGAAGTCACCACTATTTCCGACAATCGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284894.8
ENST00000400546.6
ENST00000486367.1
CDS TCA 72 bp GGTTCAGAATATCCCAATCTATTGGCAGCTGTAATCTaGACTTCATACCCCATGGTCCACTGGAGATGCTCC +
Preference number: 6 (lower is better)
Translates to: GSEYPNLLAAVI*TSYPMVHWRCS
Trigger: GGAGCATCTCCAGTGGACCATGGGGTATGAAGTTCAGATTACAGCTGCCAATAGATTGGGATATTCTGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS GCA 72 bp TTCACATCTTTAATATGCAGTGATGAGCTTCCATGCTaGCCTTTGACTTCGATACGGCCGTCCAGGCTCTTA +
Preference number: 6 (lower is better)
Translates to: FTSLICSDELPC*PLTSIRPSRLL
Trigger: TAAGAGCCTGGACGGCCGTATCGAAGTCAAAGGGCAGCATGGAAGCTCATCACTGCATATTAAAGATGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS GCA 72 bp CACATTCTCCTAGTGATGCACATCAGCAACCCACATTaGCGAATAAAGAAGCAGCTGACGTCTGTTACCACA +
Preference number: 6 (lower is better)
Translates to: HILLVMHISNPH*RIKKQLTSVTT
Trigger: TGTGGTAACAGACGTCAGCTGCTTCTTTATTCGGCAATGTGGGTTGCTGATGTGCATCACTAGGAGAATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS GCA 72 bp AAGAGCCTATATATAGATGATGGGCATCAGACTGCTTaGATCCTGTCTCCTGCATCCGCCACATATTTTCCC +
Preference number: 6 (lower is better)
Translates to: KSLYIDDGHQTA*ILSPASATYFP
Trigger: GGGAAAATATGTGGCGGATGCAGGAGACAGGATGCAAGCAGTCTGATGCCCATCATCTATATATAGGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486367.1
CDS CCA 72 bp TTTGGTGATGCTGAGTTTAAAGCTCTTTCCACTGCTTaGCTGTCCATGTATGGATGGAGGACTTGGTTCACG +
Preference number: 6 (lower is better)
Translates to: FGDAEFKALSTA*LSMYGWRTWFT
Trigger: CGTGAACCAAGTCCTCCATCCATACATGGACAGCCAAGCAGTGGAAAGAGCTTTAAACTCAGCATCACCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284894.8
ENST00000400546.6
ENST00000484983.1
CDS CAA 90 bp GGTGAACTGCTAACTCGGCAAACCACTTCTGCATCTTCTCCTTGTTaGAATTCTTGTGGAGATACCACTTCTCTGAAAGTGAGTTTTTGG +
Preference number: 6 (lower is better)
Translates to: GELLTRQTTSASSPC*NSCGDTTSLKVSFW
Trigger: CCAAAAACTCACTTTCAGAGAAGTGGTATCTCCACAAGAATTCAAACAAGGAGAAGATGCAGAAGTGGTTTGCCGAGTTAGCAGTTCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284894.8
ENST00000400546.6
ENST00000486367.1
CDS CAA 90 bp CCATCTTTCAGGTATGCAGCTTTTCCTTCTTCGAGTTCTTTACTTTaGCCACTGGAGCCACTTTTCTTTCCACACATTCTCCTAGTGATG +
Preference number: 6 (lower is better)
Translates to: PSFRYAAFPSSSSLL*PLEPLFFPHILLVM
Trigger: CATCACTAGGAGAATGTGTGGAAAGAAAAGTGGCTCCAGTGGCAAAAGTAAAGAACTCGAAGAAGGAAAAGCTGCATACCTGAAAGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS TCA 72 bp TTGAACTCCATGGGAGCGTACAATTTTCCAGATTTCTaGCGCTACTTCTTTGACATCCACCTGATAGTGATG +
Preference number: 6 (lower is better)
Translates to: LNSMGAYNFPDF*RYFFDIHLIVM
Trigger: CATCACTATCAGGTGGATGTCAAAGAAGTAGCGTCAGAAATCTGGAAAATTGTACGCTCCCATGGAGTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS CCA 72 bp TTCTGTCAGTGGTGTGGTTTCATTTGGCTCATTTACTaGGCTCCCATCTTCGTGATTAGTAACTCTTTCATC +
Preference number: 6 (lower is better)
Translates to: FCQWCGFIWLIY*APIFVISNSFI
Trigger: GATGAAAGAGTTACTAATCACGAAGATGGGAGCCCAGTAAATGAGCCAAATGAAACCACACCACTGACAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS CAA 72 bp CTAACTCGGCAAACCACTTCTGCATCTTCTCCTTGTTaGAATTCTTGTGGAGATACCACTTCTCTGAAAGTG +
Preference number: 6 (lower is better)
Translates to: LTRQTTSASSPC*NSCGDTTSLKV
Trigger: CACTTTCAGAGAAGTGGTATCTCCACAAGAATTCAAACAAGGAGAAGATGCAGAAGTGGTTTGCCGAGTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284894.8
ENST00000400546.6
ENST00000486367.1
CDS CAA 72 bp ACTGCTAACTCGGCAAACCACTTCTGCATCTTCTCCTaGTTTGAATTCTTGTGGAGATACCACTTCTCTGAA +
Preference number: 6 (lower is better)
Translates to: TANSANHFCIFS*FEFLWRYHFSE
Trigger: TTCAGAGAAGTGGTATCTCCACAAGAATTCAAACAAGGAGAAGATGCAGAAGTGGTTTGCCGAGTTAGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284894.8
ENST00000400546.6
ENST00000486367.1
CDS CAA 90 bp ATTCAATATCAAGGTACATGCTCTTTTGATGCCCTCCAATTCTGCTaGCAGCTTCACAGTCATATCTCCCTGAATCTGACAACTTCACAT +
Preference number: 6 (lower is better)
Translates to: IQYQGTCSFDALQFC*QLHSHISLNLTTSH
Trigger: ATGTGAAGTTGTCAGATTCAGGGAGATATGACTGTGAAGCTGCAAGCAGAATTGGAGGGCATCAAAAGAGCATGTACCTTGATATTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS CAA 90 bp GCTAACTCGGCAAACCACTTCTGCATCTTCTCCTTGTTTGAATTCTaGTGGAGATACCACTTCTCTGAAAGTGAGTTTTTGGTAAATTTC +
Preference number: 6 (lower is better)
Translates to: ANSANHFCIFSLFEF*WRYHFSESEFLVNF
Trigger: GAAATTTACCAAAAACTCACTTTCAGAGAAGTGGTATCTCCACAAGAATTCAAACAAGGAGAAGATGCAGAAGTGGTTTGCCGAGTTAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284894.8
ENST00000400546.6
ENST00000486367.1
CDS TCA 72 bp CCTAACACCTTCCTTTTGCACTACTACCCTCTGTGTTaGAATTATCTTCTCTCCTTGAGGATTATACCAATC +
Preference number: 6 (lower is better)
Translates to: PNTFLLHYYPLC*NYLLSLRIIPI
Trigger: GATTGGTATAATCCTCAAGGAGAGAAGATAATTTCAACACAGAGGGTAGTAGTGCAAAAGGAAGGTGTTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284894.8
ENST00000400546.6
ENST00000486367.1
CDS TCA 72 bp TTCATCCTCTGTTCTCATCTCCACTATTGGTTCTTTTaGTCCATCTTTCAGGTATGCAGCTTTTCCTTCTTC +
Preference number: 6 (lower is better)
Translates to: FILCSHLHYWFF*SIFQVCSFSFF
Trigger: GAAGAAGGAAAAGCTGCATACCTGAAAGATGGATCAAAAGAACCAATAGTGGAGATGAGAACAGAGGATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS CCA 72 bp ACCATTAAACAGCGTGTCTTTAATAATGTTGGGCTTTaGTGGCATGCTGAATTCATAAACTGTCGGTTCAGA +
Preference number: 6 (lower is better)
Translates to: TIKQRVFNNVGL*WHAEFINCRFR
Trigger: TCTGAACCGACAGTTTATGAATTCAGCATGCCACCAAAGCCCAACATTATTAAAGACACGCTGTTTAATGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS CAA 90 bp GCCTCCACTCTTCCTTCACATCTGTATATACCTTCATCACTTTTATaGATGTTGAGAATCTGCAGGTTATTGTTTGCTAACATAGCGAAC +
Preference number: 6 (lower is better)
Translates to: ASTLPSHLYIPSSLL*MLRICRLLFANIAN
Trigger: GTTCGCTATGTTAGCAAACAATAACCTGCAGATTCTCAACATCAATAAAAGTGATGAAGGTATATACAGATGTGAAGGAAGAGTGGAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284894.8
ENST00000400546.6
ENST00000461281.1
CDS GCA 72 bp TACTGTAGCTTCTTGTGTTTGTCCTTTGGCATCTGTTaGTTGACAACGATATATCCCTGCATCTTCTATATT +
Preference number: 6 (lower is better)
Translates to: YCSFLCLSFGIC*LTTIYPCIFYI
Trigger: AATATAGAAGATGCAGGGATATATCGTTGTCAAGCAACAGATGCCAAAGGACAAACACAAGAAGCTACAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284894.8
ENST00000400546.6
ENST00000486367.1
CDS CAA 72 bp TTTCATCCTCTGTTCTCATCTCCACTATTGGTTCTTTaGATCCATCTTTCAGGTATGCAGCTTTTCCTTCTT +
Preference number: 6 (lower is better)
Translates to: FHPLFSSPLLVL*IHLSGMQLFLL
Trigger: AAGAAGGAAAAGCTGCATACCTGAAAGATGGATCAAAAGAACCAATAGTGGAGATGAGAACAGAGGATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS CAA 90 bp TATATACCTTCATCACTTTTATTGATGTTGAGAATCTGCAGGTTATaGTTTGCTAACATAGCGAACCGATTGTCGGAAATAGTGGTGACT +
Preference number: 6 (lower is better)
Translates to: YIPSSLLLMLRICRL*FANIANRLSEIVVT
Trigger: AGTCACCACTATTTCCGACAATCGGTTCGCTATGTTAGCAAACAATAACCTGCAGATTCTCAACATCAATAAAAGTGATGAAGGTATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284894.8
ENST00000400546.6
ENST00000486367.1
CDS CAA 90 bp ACTCTTCCTTCACATCTGTATATACCTTCATCACTTTTATTGATGTaGAGAATCTGCAGGTTATTGTTTGCTAACATAGCGAACCGATTG +
Preference number: 6 (lower is better)
Translates to: TLPSHLYIPSSLLLM*RICRLLFANIANRL
Trigger: CAATCGGTTCGCTATGTTAGCAAACAATAACCTGCAGATTCTCAACATCAATAAAAGTGATGAAGGTATATACAGATGTGAAGGAAGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS CAA 90 bp ACTCTTCCTTCACATCTGTATATACCTTCATCACTTTTATTGATGTaGAGAATCTGCAGGTTATTGTTTGCTAACATAGCGAACCGATCT +
Preference number: 6 (lower is better)
Translates to: TLPSHLYIPSSLLLM*RICRLLFANIANRS
Trigger: AGATCGGTTCGCTATGTTAGCAAACAATAACCTGCAGATTCTCAACATCAATAAAAGTGATGAAGGTATATACAGATGTGAAGGAAGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461281.1
CDS CAA 90 bp TATATACCTTCATCACTTTTATTGATGTTGAGAATCTGCAGGTTATaGTTTGCTAACATAGCGAACCGATCTGAAATTTATCACCTGGCA +
Preference number: 6 (lower is better)
Translates to: YIPSSLLLMLRICRL*FANIANRSEIYHLA
Trigger: TGCCAGGTGATAAATTTCAGATCGGTTCGCTATGTTAGCAAACAATAACCTGCAGATTCTCAACATCAATAAAAGTGATGAAGGTATATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461281.1
CDS TCA 72 bp TTTTTAGCAGGTAAGACTAATTTATCTCTTCTCCAGTaGATTGATGCTGGTGGATTCGATTTCACATCACAA +
Preference number: 6 (lower is better)
Translates to: FLAGKTNLSLLQ*IDAGGFDFTSQ
Trigger: TTGTGATGTGAAATCGAATCCACCAGCATCAATTCACTGGAGAAGAGATAAATTAGTCTTACCTGCTAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284894.8
ENST00000400546.6
CDS CAA 72 bp TCATCACTTTTATTGATGTTGAGAATCTGCAGGTTATaGTTTGCTAACATAGCGAACCGATTGTCGGAAATA +
Preference number: 6 (lower is better)
Translates to: SSLLLMLRICRL*FANIANRLSEI
Trigger: TATTTCCGACAATCGGTTCGCTATGTTAGCAAACAATAACCTGCAGATTCTCAACATCAATAAAAGTGATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284894.8
ENST00000400546.6
ENST00000486367.1
CDS CAA 72 bp TCACATCTGTATATACCTTCATCACTTTTATTGATGTaGAGAATCTGCAGGTTATTGTTTGCTAACATAGCG +
Preference number: 6 (lower is better)
Translates to: SHLYIPSSLLLM*RICRLLFANIA
Trigger: CGCTATGTTAGCAAACAATAACCTGCAGATTCTCAACATCAATAAAAGTGATGAAGGTATATACAGATGTGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284894.8
ENST00000400546.6
ENST00000461281.1
ENST00000486367.1