RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NCAM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000149294

Ensembl transcript IDs: ENST00000316851.12, ENST00000401611.6, ENST00000524916.1, ENST00000525355.5, ENST00000525691.5, ENST00000525973.5, ENST00000526322.5, ENST00000528158.2, ENST00000528590.5, ENST00000529356.5, ENST00000530090.1, ENST00000530543.5, ENST00000531044.5, ENST00000531817.5, ENST00000533073.5, ENST00000533226.2, ENST00000534046.2, ENST00000534516.2, ENST00000611284.4, ENST00000613217.4, ENST00000615112.4, ENST00000615285.4, ENST00000615525.1, ENST00000617166.1, ENST00000618266.4, ENST00000619839.4, ENST00000620046.4, ENST00000621128.4, ENST00000621518.4, ENST00000621850.4

Found 2439 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTCCAAAGGGTCCCTTCAGAAAGATGGACACTGCCCCTCTCCTGTaGGTGGTCCTGGGATCAGGGGGAGGCAGACTCCCAAGCTGGGCC +
Preference number: 1 (lower is better)
Translates to: SPKGPFRKMDTAPLL*VVLGSGGGRLPSWA
Trigger: GGCCCAGCTTGGGAGTCTGCCTCCCCCTGATCCCAGGACCACCCACAGGAGAGGGGCAGTGTCCATCTTTCTGAAGGGACCCTTTGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR TCA 90 bp GAAGCGCCATCTGGGACTCCAGCGGGGAGAGTTTTGTGGCTGGGTTaGGAGGCACTACCCTGCCTGAGCTACTGTGCAGCATGGAGCCTC +
Preference number: 1 (lower is better)
Translates to: EAPSGTPAGRVLWLG*EALPCLSYCAAWSL
Trigger: GAGGCTCCATGCTGCACAGTAGCTCAGGCAGGGTAGTGCCTCTCAACCCAGCCACAAAACTCTCCCCGCTGGAGTCCCAGATGGCGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR GCA 90 bp GATGAAGAACTGAGTCCACTGAACAGCCTGGTGACCAGAAGAGCCTaGCCCTCACTGCTGGGCCCTCCCGGTCTCAGACACCCAGGCTCT +
Preference number: 1 (lower is better)
Translates to: DEELSPLNSLVTRRA*PSLLGPPGLRHPGS
Trigger: AGAGCCTGGGTGTCTGAGACCGGGAGGGCCCAGCAGTGAGGGGCAGGCTCTTCTGGTCACCAGGCTGTTCAGTGGACTCAGTTCTTCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR TCA 90 bp GAACTCAGTGTCCGTGGGGAGTGGGTATGCGCTAGTGCTGCCTCCTaGGGAGCGCACTGTTACAAGCCGTGGGTCTGTCTAAATGGGACC +
Preference number: 1 (lower is better)
Translates to: ELSVRGEWVCASAAS*GAHCYKPWVCLNGT
Trigger: GGTCCCATTTAGACAGACCCACGGCTTGTAACAGTGCGCTCCTCAGGAGGCAGCACTAGCGCATACCCACTCCCCACGGACACTGAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR GCA 90 bp ATCCTTATGCTCTGCCCTGTGCCCAAAAACCATGCCTGCCTCCACTaGCCTGGTGTGAAGCGCCATCTGGGACTCCAGCGGGGAGAGTTT +
Preference number: 1 (lower is better)
Translates to: ILMLCPVPKNHACLH*PGVKRHLGLQRGEF
Trigger: AAACTCTCCCCGCTGGAGTCCCAGATGGCGCTTCACACCAGGGCAGTGGAGGCAGGCATGGTTTTTGGGCACAGGGCAGAGCATAAGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR CCA 90 bp GGACTTCAGCATGACGTGGTCACTGCCAGACGGGAGCCTGATCTCTaGTTTCCACTCGGAGGAGAGCGCTCGGTACCTGACCAGATAGTG +
Preference number: 1 (lower is better)
Translates to: GLQHDVVTARREPDL*FPLGGERSVPDQIV
Trigger: CACTATCTGGTCAGGTACCGAGCGCTCTCCTCCGAGTGGAAACCAGAGATCAGGCTCCCGTCTGGCAGTGACCACGTCATGCTGAAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531817.5
3UTR TCA 90 bp TGCCTCCCAAGGTTGCTGGGATGGCTGTGGGCTGGGCCGAGGTCCTaGACACAAAATGAGCCGCCTTGGATTTTCCTTGCTGGTTCTCAG +
Preference number: 1 (lower is better)
Translates to: CLPRLLGWLWAGPRS*TQNEPPWIFLAGSQ
Trigger: CTGAGAACCAGCAAGGAAAATCCAAGGCGGCTCATTTTGTGTTCAGGACCTCGGCCCAGCCCACAGCCATCCCAGCAACCTTGGGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531817.5
3UTR GCA 90 bp AAAGCTGCACTATATACACCACAGCCCTGCAGGGTCCAGTGGCCCTaGTCGTCACACTTGAGTGCTCCTCCAGCAGAACTTGGCCATGCC +
Preference number: 1 (lower is better)
Translates to: KAALYTPQPCRVQWP*SSHLSAPPAELGHA
Trigger: GGCATGGCCAAGTTCTGCTGGAGGAGCACTCAAGTGTGACGAGCAGGGCCACTGGACCCTGCAGGGCTGTGGTGTATATAGTGCAGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR CCA 90 bp ATCGCCACTGATCAGACTGCAGAAGTGTCAGAACGTTGGGGAGAGTaGCCCACAGAATGGACCCAGAGGCAGCCTTGCCACCCTAACCTC +
Preference number: 1 (lower is better)
Translates to: IATDQTAEVSERWGE*PTEWTQRQPCHPNL
Trigger: GAGGTTAGGGTGGCAAGGCTGCCTCTGGGTCCATTCTGTGGGCCACTCTCCCCAACGTTCTGACACTTCTGCAGTCTGATCAGTGGCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR CCA 90 bp ACCTCCAAAGCTGCACTATATACACCACAGCCCTGCAGGGTCCAGTaGCCCTGCTCGTCACACTTGAGTGCTCCTCCAGCAGAACTTGGC +
Preference number: 1 (lower is better)
Translates to: TSKAALYTPQPCRVQ*PCSSHLSAPPAELG
Trigger: GCCAAGTTCTGCTGGAGGAGCACTCAAGTGTGACGAGCAGGGCCACTGGACCCTGCAGGGCTGTGGTGTATATAGTGCAGCTTTGGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR CCA 90 bp TCTCCACACTTAGGACGAGATCTCCAAAGGGTCCCTTCAGAAAGATaGACACTGCCCCTCTCCTGTGGGTGGTCCTGGGATCAGGGGGAG +
Preference number: 1 (lower is better)
Translates to: SPHLGRDLQRVPSER*TLPLSCGWSWDQGE
Trigger: CTCCCCCTGATCCCAGGACCACCCACAGGAGAGGGGCAGTGTCCATCTTTCTGAAGGGACCCTTTGGAGATCTCGTCCTAAGTGTGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR TCA 90 bp CTGTGCAGCATGGAGCCTCTGATGTCTGCACGTGAGCCTCTAAACTaGGCGCTGGGGATTAATGGCGAGCGCCAACATAGGTGGCTTTGC +
Preference number: 1 (lower is better)
Translates to: LCSMEPLMSAREPLN*ALGINGERQHRWLC
Trigger: GCAAAGCCACCTATGTTGGCGCTCGCCATTAATCCCCAGCGCTCAGTTTAGAGGCTCACGTGCAGACATCAGAGGCTCCATGCTGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR GCA 90 bp CTAAATGGGACCCTTGAGGACCCTGACATTGTTTCAGCTGAGGCCTaGCTGACCCTGGGATGTGTTGAGATGACAGGGCCACGTCAGTCC +
Preference number: 1 (lower is better)
Translates to: LNGTLEDPDIVSAEA*LTLGCVEMTGPRQS
Trigger: GGACTGACGTGGCCCTGTCATCTCAACACATCCCAGGGTCAGGCAGGCCTCAGCTGAAACAATGTCAGGGTCCTCAAGGGTCCCATTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR CCA 90 bp CTGCCCAAGGTGATCCTAAGAGCCAGTAGCTCTCCCACACTGACCTaGGATCCTTATGCTCTGCCCTGTGCCCAAAAACCATGCCTGCCT +
Preference number: 1 (lower is better)
Translates to: LPKVILRASSSPTLT*DPYALPCAQKPCLP
Trigger: AGGCAGGCATGGTTTTTGGGCACAGGGCAGAGCATAAGGATCCCAGGTCAGTGTGGGAGAGCTACTGGCTCTTAGGATCACCTTGGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR CCA 90 bp GATGCTTCCAACCTGTCCTGTAGACTGATGCTCAAAGCCATTCTGTaGGTCACTGCTGAACCACGGCCCCACTCTGTGCTGATCTGCGAC +
Preference number: 1 (lower is better)
Translates to: DASNLSCRLMLKAIL*VTAEPRPHSVLICD
Trigger: GTCGCAGATCAGCACAGAGTGGGGCCGTGGTTCAGCAGTGACCCACAGAATGGCTTTGAGCATCAGTCTACAGGACAGGTTGGAAGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR TCA 90 bp GGCATGGGCTTGGCCTGGTGTGGCAAAGCCATCGACATTACAAGATaGAGAACTGAGTCCACTGAACAGCCTGGTGACCAGAAGAGCCTG +
Preference number: 1 (lower is better)
Translates to: GMGLAWCGKAIDITR*RTESTEQPGDQKSL
Trigger: CAGGCTCTTCTGGTCACCAGGCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACCAGGCCAAGCCCATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR TCA 90 bp CTAATGCCTGGTTCACAGTGGATGCTTCCAACCTGTCCTGTAGACTaGTGCTCAAAGCCATTCTGTGGGTCACTGCTGAACCACGGCCCC +
Preference number: 1 (lower is better)
Translates to: LMPGSQWMLPTCPVD*CSKPFCGSLLNHGP
Trigger: GGGGCCGTGGTTCAGCAGTGACCCACAGAATGGCTTTGAGCATCAGTCTACAGGACAGGTTGGAAGCATCCACTGTGAACCAGGCATTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR TCA 90 bp GGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGGTCTaGAAACCGCCATCCAGACAGACAGCCTCAAGTGAAAACCTGGGA +
Preference number: 1 (lower is better)
Translates to: GPRSTECWVGMLMEV*KPPSRQTASSENLG
Trigger: TCCCAGGTTTTCACTTGAGGCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR GCA 90 bp CTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTaGCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACT +
Preference number: 1 (lower is better)
Translates to: LPHRMVAQQLWPWWS*QVLPKGALIFFIGT
Trigger: AGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
3UTR CCA 90 bp CCAGTGGCCCTGCTCGTCACACTTGAGTGCTCCTCCAGCAGAACTTaGCCATGCCGGTCTTCATGTGAATACATATGTATGGCACATACA +
Preference number: 1 (lower is better)
Translates to: PVALLVTLECSSSRT*PCRSSCEYICMAHT
Trigger: TGTATGTGCCATACATATGTATTCACATGAAGACCGGCATGGCCAAGTTCTGCTGGAGGAGCACTCAAGTGTGACGAGCAGGGCCACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR CCA 90 bp CCTTCTCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTaGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATA +
Preference number: 1 (lower is better)
Translates to: PSLPHRMVAQQLWPW*SCQVLPKGALIFFI
Trigger: TATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGAGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
3UTR CCA 90 bp AAACCTTCTCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATaGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTC +
Preference number: 1 (lower is better)
Translates to: KPSLPHRMVAQQLWP*WSCQVLPKGALIFF
Trigger: GAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGAGAAGGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
3UTR CCA 90 bp GTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTaGCGGCTAATCAGAAAGTGGTCTAACCCCCAAAGAAACACAAAA +
Preference number: 1 (lower is better)
Translates to: VRTPGSRSLFTDAGR*RLIRKWSNPQRNTK
Trigger: TTTTGTGTTTCTTTGGGGGTTAGACCACTTTCTGATTAGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR CCA 90 bp ATGGCGAGCGCCAACATAGGTGGCTTTGCCCCTCAGACCACAGCATaGGATCATTTGGAATCCCAAAGGGAAAGGCTAGTCTTTGAACAT +
Preference number: 1 (lower is better)
Translates to: MASANIGGFAPQTTA*DHLESQRERLVFEH
Trigger: ATGTTCAAAGACTAGCCTTTCCCTTTGGGATTCCAAATGATCCCATGCTGTGGTCTGAGGGGCAAAGCCACCTATGTTGGCGCTCGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR TCA 90 bp CTCTGCTTCATTCAACAAAGCCTAAGGAGTCCTTCAAAAGAAGGGTaGGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGT +
Preference number: 1 (lower is better)
Translates to: LCFIQQSLRSPSKEG*ERLGADPFSQMQAG
Trigger: ACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACCCTTCTTTTGAAGGACTCCTTAGGCTTTGTTGAATGAAGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR GCA 90 bp TGCTTGATCAGGTTCACTTTAATAGAGTTTCCATCCTCTCCCATCTaGCCTTCGAGCTTAGGTGCACTGGGTTCCCCTTCTGCTTTCTGC +
Preference number: 1 (lower is better)
Translates to: CLIRFTLIEFPSSPI*PSSLGALGSPSAFC
Trigger: GCAGAAAGCAGAAGGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGGAAACTCTATTAAAGTGAACCTGATCAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531817.5
3UTR TCA 90 bp AGGGAGTTTTTATTCAGTAGAAGGTCCATCCCCAAGCACACACACTaGTATTACCAAGCAGGATTCAGCCCTGAGTCTCCACAAGGGACC +
Preference number: 1 (lower is better)
Translates to: REFLFSRRSIPKHTH*YYQAGFSPESPQGT
Trigger: GGTCCCTTGTGGAGACTCAGGGCTGAATCCTGCTTGGTAATATCAGTGTGTGTGCTTGGGGATGGACCTTCTACTGAATAAAAACTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR TCA 90 bp CATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATTCTaGGGGCCTGTGCATTTGAACCAGAGATCTGTGCAGGCCCTAGAA +
Preference number: 1 (lower is better)
Translates to: HSTVCSKISLHVPLF*GPVHLNQRSVQALE
Trigger: TTCTAGGGCCTGCACAGATCTCTGGTTCAAATGCACAGGCCCTCAGAATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR GCA 90 bp GTGTTTGTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATaGTCTGGTGAAGCTGCTGTGTCACTTTTTATTTTGATCTTTGCT +
Preference number: 1 (lower is better)
Translates to: VFVCVRACVCLWCWK*SGEAAVSLFILIFA
Trigger: AGCAAAGATCAAAATAAAAAGTGACACAGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACACAAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR GCA 90 bp GACTTCAGTTGCCCATCATGTCAGCAAAACGCTCATGTGAATCAGTaGGGTCTGGCTCTTTTAACATGGGCACTTAAATGCTTAATTGCA +
Preference number: 1 (lower is better)
Translates to: DFSCPSCQQNAHVNQ*GLALLTWALKCLIA
Trigger: TGCAATTAAGCATTTAAGTGCCCATGTTAAAAGAGCCAGACCGCACTGATTCACATGAGCGTTTTGCTGACATGATGGGCAACTGAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR TCA 90 bp ACATGGGCACTTAAATGCTTAATTGCAAGCAAAGCCAATTATTATTaGAGGGAGGACAAGGAGCACAGAGTTAGAATGAGGGGAATGTGT +
Preference number: 1 (lower is better)
Translates to: TWALKCLIASKANYY*REDKEHRVRMRGMC
Trigger: ACACATTCCCCTCATTCTAACTCTGTGCTCCTTGTCCTCCCTTCAATAATAATTGGCTTTGCTTGCAATTAAGCATTTAAGTGCCCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR TCA 90 bp TGTGCAAGCAGAAATATTATAAAATCTAAAACTCCCACACAGCTTTaGTGCTTGAACACTATGAACATGCACGCATACTCATATGGATTC +
Preference number: 1 (lower is better)
Translates to: CASRNIIKSKTPTQL*CLNTMNMHAYSYGF
Trigger: GAATCCATATGAGTATGCGTGCATGTTCATAGTGTTCAAGCATCAAAGCTGTGTGGGAGTTTTAGATTTTATAATATTTCTGCTTGCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531817.5
3UTR-3UTR TCA 90 bp CCACTGCCCTGGTGTGAAGCGCCATCTGGGACTCCAGCGGGGAGAGTTTTGTGGGCAGCATGGAGCCTCTaGTGTCTGCACGTGAGCCTC +
Preference number: 2 (lower is better)
Translates to: PLPWCEAPSGTPAGRVLWAAWSL*CLHVSL
Trigger: GAGGCTCACGTGCAGACATCAGAGGCTCCATGCTGC...CCACAAAACTCTCCCCGCTGGAGTCCCAGATGGCGCTTCACACCAGGGCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR-3UTR TCA 90 bp TTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACCCAGGGACTTCAGCATaGCGTGGTCACTGCCAGACG +
Preference number: 2 (lower is better)
Translates to: LLSSCGHGGPARFFQRGHPGTSA*RGHCQT
Trigger: CGTCTGGCAGTGACCACGTCATGCTGAAGTCCCTGG...GTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531817.5
3UTR-3UTR GCA 90 bp CTGCCTCCACTGCCCTGGTGTGAAGCGCCATCTGGGACTCCAGCGGGGAGAGTTCTGCCTGAGCTACTGTaGAGCATGGAGCCTCTGATG +
Preference number: 2 (lower is better)
Translates to: LPPLPWCEAPSGTPAGRVLPELL*SMEPLM
Trigger: CATCAGAGGCTCCATGCTGCACAGTAGCTCAGGCAG...AACTCTCCCCGCTGGAGTCCCAGATGGCGCTTCACACCAGGGCAGTGGAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR-3UTR CCA 90 bp CCTGGTGTGAAGCGCCATCTGGGACTCCAGCGGGGAGAGTTTTGTGGCTGGGTTTTAACCCTCCTGGGCTaGGCAGTCTGGGAGTGGCCT +
Preference number: 2 (lower is better)
Translates to: PGVKRHLGLQRGEFCGWVLTLLG*AVWEWP
Trigger: AGGCCACTCCCAGACTGCCCAGCCCAGGAGGGTTAA...AACCCAGCCACAAAACTCTCCCCGCTGGAGTCCCAGATGGCGCTTCACACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR-3UTR CCA 90 bp GGGGCCAGGGCTGTGTGTTCTGGGATCCTCCATTTCCATCCCCAGGAGCTGAGAGAACGTTGGGGAGAGTaGCCCACAGAATGGACCCAG +
Preference number: 2 (lower is better)
Translates to: GARAVCSGILHFHPQELRERWGE*PTEWTQ
Trigger: CTGGGTCCATTCTGTGGGCCACTCTCCCCAACGTTC...TCTCAGCTCCTGGGGATGGAAATGGAGGATCCCAGAACACACAGCCCTGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CCA 90 bp TTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACCGGGAGCCTGATCTCTaGTTTCCACTCGGAGGAGAG +
Preference number: 2 (lower is better)
Translates to: LLSSCGHGGPARFFQRGHREPDL*FPLGGE
Trigger: CTCTCCTCCGAGTGGAAACCAGAGATCAGGCTCCCG...GTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531817.5
3UTR-3UTR TCA 90 bp GGGAGTGGGTATGCGCTAGTGCTGCCTCCTGAGGAGCGCACTGTTACAAGCCGTCCTCTCCTTCTCTACTaGGCACACACAGGCCAGGTA +
Preference number: 2 (lower is better)
Translates to: GSGYALVLPPEERTVTSRPLLLY*AHTGQV
Trigger: TACCTGGCCTGTGTGTGCTCAGTAGAGAAGGAGAGG...ACGGCTTGTAACAGTGCGCTCCTCAGGAGGCAGCACTAGCGCATACCCACTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR-3UTR TCA 90 bp CCTGGTGTGAAGCGCCATCTGGGACTCCAGCGGGGAGAGTTTTGTGGCTGGGTTCGTGAGCCTCTAAACTaGGCGCTGGGGATTAATGGC +
Preference number: 2 (lower is better)
Translates to: PGVKRHLGLQRGEFCGWVREPLN*ALGING
Trigger: GCCATTAATCCCCAGCGCTCAGTTTAGAGGCTCACG...AACCCAGCCACAAAACTCTCCCCGCTGGAGTCCCAGATGGCGCTTCACACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR-3UTR CCA 90 bp CGCCAACATAGGTGGCTTTGCCCCTCAGACCACAGCATGGGATCATTTGGAATCCTGGGCTGGGCAGTCTaGGAGTGGCCTGTCCCTCTC +
Preference number: 2 (lower is better)
Translates to: RQHRWLCPSDHSMGSFGILGWAV*EWPVPL
Trigger: GAGAGGGACAGGCCACTCCCAGACTGCCCAGCCCAG...GATTCCAAATGATCCCATGCTGTGGTCTGAGGGGCAAAGCCACCTATGTTGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR-3UTR CCA 90 bp AAAGCCATTCTGTGGGTCACTGCTGAACCACGGCCCCACTCTGTGCTGATCTGCCAGCAGCTGTGGCCATaGTGGTCCTGCCAGGTTCTT +
Preference number: 2 (lower is better)
Translates to: KAILWVTAEPRPHSVLICQQLWP*WSCQVL
Trigger: AAGAACCTGGCAGGACCACCATGGCCACAGCTGCTG...GCAGATCAGCACAGAGTGGGGCCGTGGTTCAGCAGTGACCCACAGAATGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR-3UTR CCA 90 bp AGTTTTGTGGCTGGGTTGAGAGGCACTACCCTGCCTGAGCTACTGTGCAGCATGGTTGCTCAGCAGCTGTaGCCATGGTGGTCCTGCCAG +
Preference number: 2 (lower is better)
Translates to: SFVAGLRGTTLPELLCSMVAQQL*PWWSCQ
Trigger: CTGGCAGGACCACCATGGCCACAGCTGCTGAGCAAC...CATGCTGCACAGTAGCTCAGGCAGGGTAGTGCCTCTCAACCCAGCCACAAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR-3UTR TCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTAAAGCAAGCGTGGGATaGTCCTACCTACCTCTAGGT +
Preference number: 2 (lower is better)
Translates to: GENAWEQIPFHRCRQVAAKASVG*SYLPLG
Trigger: ACCTAGAGGTAGGTAGGATCATCCCACGCTTGCTTT...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR TCA 90 bp CCCACACTGACCTGGGATCCTTATGCTCTGCCCTGTGCCCAAAAACCATGCCTGCCTCTCCTTCTCTACTaGGCACACACAGGCCAGGTA +
Preference number: 2 (lower is better)
Translates to: PTLTWDPYALPCAQKPCLPLLLY*AHTGQV
Trigger: TACCTGGCCTGTGTGTGCTCAGTAGAGAAGGAGAGG...CAGGCATGGTTTTTGGGCACAGGGCAGAGCATAAGGATCCCAGGTCAGTGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR-3UTR CCA 90 bp CGCCAACATAGGTGGCTTTGCCCCTCAGACCACAGCATGGGATCATTTGGAATCGTTGCTCAGCAGCTGTaGCCATGGTGGTCCTGCCAG +
Preference number: 2 (lower is better)
Translates to: RQHRWLCPSDHSMGSFGIVAQQL*PWWSCQ
Trigger: CTGGCAGGACCACCATGGCCACAGCTGCTGAGCAAC...GATTCCAAATGATCCCATGCTGTGGTCTGAGGGGCAAAGCCACCTATGTTGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR-3UTR TCA 90 bp GGGGCCAGGGCTGTGTGTTCTGGGATCCTCCATTTCCATCCCCAGGAGCTGAGAAAGACACTAATTCCCTaGAGCACACATGCTCTTCCG +
Preference number: 2 (lower is better)
Translates to: GARAVCSGILHFHPQELRKTLIP*STHALP
Trigger: CGGAAGAGCATGTGTGCTTCAGGGAATTAGTGTCTT...TCTCAGCTCCTGGGGATGGAAATGGAGGATCCCAGAACACACAGCCCTGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR TCA 90 bp GAGCGCTGGGGATTAATGGCGAGCGCCAACATAGGTGGCTTTGCCCCTCAGACCACCTGTCCTGTAGACTaGTGCTCAAAGCCATTCTGT +
Preference number: 2 (lower is better)
Translates to: ERWGLMASANIGGFAPQTTCPVD*CSKPFC
Trigger: ACAGAATGGCTTTGAGCATCAGTCTACAGGACAGGT...GGTCTGAGGGGCAAAGCCACCTATGTTGGCGCTCGCCATTAATCCCCAGCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR-3UTR GCA 90 bp GGGCATTCAGGAAGCACTGACAGGTTGGCTCGGCCCCAATTTATTAACCCTCCTTGGCCATGGTGGTCCTaGCAGGTTCTTCCAAAGGGG +
Preference number: 2 (lower is better)
Translates to: GHSGSTDRLARPQFINPPWPWWS*QVLPKG
Trigger: CCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCA...AGGAGGGTTAATAAATTGGGGCCGAGCCAACCTGTCAGTGCTTCCTGAATGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR-3UTR GCA 90 bp GGGAGTGGGTATGCGCTAGTGCTGCCTCCTGAGGAGCGCACTGTTACAAGCCGTAGGGGTGACTTCAGTTaGCCATCATGTCAGCAAAAC +
Preference number: 2 (lower is better)
Translates to: GSGYALVLPPEERTVTSRRGDFS*PSCQQN
Trigger: GTTTTGCTGACATGATGGGCAACTGAAGTCACCCCT...ACGGCTTGTAACAGTGCGCTCCTCAGGAGGCAGCACTAGCGCATACCCACTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR-3UTR CCA 90 bp GAGCGCTGGGGATTAATGGCGAGCGCCAACATAGGTGGCTTTGCCCCTCAGACCGAAGCACTGACAGGTTaGCTCGGCCCCAATTTATTA +
Preference number: 2 (lower is better)
Translates to: ERWGLMASANIGGFAPQTEALTG*LGPNLL
Trigger: TAATAAATTGGGGCCGAGCCAACCTGTCAGTGCTTC...GGTCTGAGGGGCAAAGCCACCTATGTTGGCGCTCGCCATTAATCCCCAGCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR-3UTR TCA 90 bp GGGCATTCAGGAAGCACTGACAGGTTGGCTCGGCCCCAATTTATTAACCCTCCTCATGGGCAACAGGGGTaGCTTCAGTTGCCCATCATG +
Preference number: 2 (lower is better)
Translates to: GHSGSTDRLARPQFINPPHGQQG*LQLPIM
Trigger: CATGATGGGCAACTGAAGTCACCCCTGTTGCCCATG...AGGAGGGTTAATAAATTGGGGCCGAGCCAACCTGTCAGTGCTTCCTGAATGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR-3UTR CCA 90 bp GTGGATGCTTCCAACCTGTCCTGTAGACTGATGCTCAAAGCCATTCTGTGGGTCCAGCTGTGGCCATGGTaGTCCTGCCAGGTTCTTCCA +
Preference number: 2 (lower is better)
Translates to: VDASNLSCRLMLKAILWVQLWPW*SCQVLP
Trigger: TGGAAGAACCTGGCAGGACCACCATGGCCACAGCTG...GACCCACAGAATGGCTTTGAGCATCAGTCTACAGGACAGGTTGGAAGCATCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR CAA 90 bp CTGGGCCGAGGTCCTGAACACAAAATGAGCCGCCTTGGATTTTCCTaGCTGGTTCTCAGCCACCACGTAGACCTCATACTCAGCATTCCA +
Preference number: 2 (lower is better)
Translates to: LGRGPEHKMSRLGFS*LVLSHHVDLILSIP
Trigger: TGGAATGCTGAGTATGAGGTCTACGTGGTGGCTGAGAACCAGCAAGGAAAATCCAAGGCGGCTCATTTTGTGTTCAGGACCTCGGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531817.5
3UTR-3UTR GCA 90 bp AACATAGGTGGCTTTGCCCCTCAGACCACAGCATGGGATCATTTGGAATCCCAACACTCTGTGCTGATCTaGGACATGCTGCCAGGCAGC +
Preference number: 2 (lower is better)
Translates to: NIGGFAPQTTAWDHLESQHSVLI*DMLPGS
Trigger: GCTGCCTGGCAGCATGTCGCAGATCAGCACAGAGTG...TTGGGATTCCAAATGATCCCATGCTGTGGTCTGAGGGGCAAAGCCACCTATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR-3UTR CCA 90 bp GGGGCCAGGGCTGTGTGTTCTGGGATCCTCCATTTCCATCCCCAGGAGCTGAGACACAAAGGGGATGTGTaGGGTAATAATGTGTGTTCA +
Preference number: 2 (lower is better)
Translates to: GARAVCSGILHFHPQELRHKGDV*GNNVCS
Trigger: TGAACACACATTATTACCCCACACATCCCCTTTGTG...TCTCAGCTCCTGGGGATGGAAATGGAGGATCCCAGAACACACAGCCCTGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CCA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCGGGCTTGGCCTGGTGTaGCAAAGCCATCGACATTAC +
Preference number: 2 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSGLGLV*QSHRHY
Trigger: GTAATGTCGATGGCTTTGCCACACCAGGCCAAGCCC...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CCA 90 bp CAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCGCACGCATACTCATATaGATTCTTCAGGAGATTCAG +
Preference number: 2 (lower is better)
Translates to: QQLWPWWSCQVLPKGALIARILI*ILQEIQ
Trigger: CTGAATCTCCTGAAGAATCCATATGAGTATGCGTGC...GATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531817.5
3UTR-3UTR CCA 90 bp CGCCAACATAGGTGGCTTTGCCCCTCAGACCACAGCATGGGATCATTTGGAATCCTTGTTGGCACATCATaGCTTGGCCCCGTTCACAGA +
Preference number: 2 (lower is better)
Translates to: RQHRWLCPSDHSMGSFGILVGTS*LGPVHR
Trigger: TCTGTGAACGGGGCCAAGCCATGATGTGCCAACAAG...GATTCCAAATGATCCCATGCTGTGGTCTGAGGGGCAAAGCCACCTATGTTGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR-3UTR TCA 90 bp TGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAAGCAAAACGCTCATGTaGATCAGTGCGGTCTGGCTC +
Preference number: 2 (lower is better)
Translates to: WPWWSCQVLPKGALIFFISKTLM*ISAVWL
Trigger: GAGCCAGACCGCACTGATTCACATGAGCGTTTTGCT...TATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR-3UTR GCA 90 bp GGTGTGGCAAAGCCATCGACATTACAAGATGAAGAACTGAGTCCACTGAACAGCACCCAGAGGCAGCCTTaGCACCCTAACCTCTTGCTG +
Preference number: 2 (lower is better)
Translates to: GVAKPSTLQDEELSPLNSTQRQP*HPNLLL
Trigger: CAGCAAGAGGTTAGGGTGGCAAGGCTGCCTCTGGGT...GCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR GCA 90 bp AAAGCCATTCTGTGGGTCACTGCTGAACCACGGCCCCACTCTGTGCTGATCTGCGCTCATGTGAATCAGTaGGGTCTGGCTCTTTTAACA +
Preference number: 2 (lower is better)
Translates to: KAILWVTAEPRPHSVLICAHVNQ*GLALLT
Trigger: TGTTAAAAGAGCCAGACCGCACTGATTCACATGAGC...GCAGATCAGCACAGAGTGGGGCCGTGGTTCAGCAGTGACCCACAGAATGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR-3UTR CCA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAAGAACGTTGGGGAGAGTaGCCCACAGAATGGACCCAG +
Preference number: 2 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCEERWGE*PTEWTQ
Trigger: CTGGGTCCATTCTGTGGGCCACTCTCCCCAACGTTC...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CCA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCCAGGGCTGTGTGTTCTaGGATCCTCCATTTCCATCC +
Preference number: 2 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSQGCVF*DPPFPS
Trigger: GGATGGAAATGGAGGATCCCAGAACACACAGCCCTG...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CCA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAAGGTATGGCATGGGCTTaGCCTGGTGTGGCAAAGCCA +
Preference number: 2 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCEGMAWA*PGVAKP
Trigger: TGGCTTTGCCACACCAGGCCAAGCCCATGCCATACC...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CCA 90 bp GTCCTCTCCACACTTAGGACGAGATCTCCAAAGGGTCCCTTCAGAAAGATGGACACCCATTTCCTCTCCTaGGTGAACTCCCAAGCAGCA +
Preference number: 2 (lower is better)
Translates to: VLSTLRTRSPKGPFRKMDTHFLS*VNSQAA
Trigger: TGCTGCTTGGGAGTTCACCCAGGAGAGGAAATGGGT...GTCCATCTTTCTGAAGGGACCCTTTGGAGATCTCGTCCTAAGTGTGGAGAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR-3UTR TCA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCAAAGCAAGCGTGGGATaGTCCTACCTACCTCTAGGT +
Preference number: 2 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSKASVG*SYLPLG
Trigger: ACCTAGAGGTAGGTAGGATCATCCCACGCTTGCTTT...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR GCA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTAACCCAGAGGCAGCCTTaGCACCCTAACCTCTTGCTG +
Preference number: 2 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLTQRQP*HPNLLL
Trigger: CAGCAAGAGGTTAGGGTGGCAAGGCTGCCTCTGGGT...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTTCACCTTGTAAACACTaGAAAACAAAGTTGGCAGAA +
Preference number: 2 (lower is better)
Translates to: GENAWEQIPFHRCRQVAASPCKH*KTKLAE
Trigger: TTCTGCCAACTTTGTTTTCCAGTGTTTACAAGGTGA...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CCA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCGTGCTAAAGCAAGCGTaGGATGATCCTACCTACCTC +
Preference number: 2 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSVLKQA*DDPTYL
Trigger: GAGGTAGGTAGGATCATCCCACGCTTGCTTTAGCAC...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CCA 90 bp AACATAGGTGGCTTTGCCCCTCAGACCACAGCATGGGATCATTTGGAATCCCAACACCAATACAGAGGCTaGGGCATTCAGGAAGCACTG +
Preference number: 2 (lower is better)
Translates to: NIGGFAPQTTAWDHLESQHQYRG*GIQEAL
Trigger: CAGTGCTTCCTGAATGCCCCAGCCTCTGTATTGGTG...TTGGGATTCCAAATGATCCCATGCTGTGGTCTGAGGGGCAAAGCCACCTATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR CAA 90 bp CAGAACCAAAACCAGTTTGACCTAACCACAACCACTTTGACAGTCTaGACAAGGTATGGCATGGGCTTGGCCTGGTGTGGCAAAGCCATC +
Preference number: 2 (lower is better)
Translates to: QNQNQFDLTTTTLTV*TRYGMGLAWCGKAI
Trigger: GATGGCTTTGCCACACCAGGCCAAGCCCATGCCATACCTTGTCAAGACTGTCAAAGTGGTTGTGGTTAGGTCAAACTGGTTTTGGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR CAA 90 bp CCTAACCATCAGAACCAAAACCAGTTTGACCTAACCACAACCACTTaGACAGTCTTGACAAGGTATGGCATGGGCTTGGCCTGGTGTGGC +
Preference number: 2 (lower is better)
Translates to: PNHQNQNQFDLTTTT*TVLTRYGMGLAWCG
Trigger: GCCACACCAGGCCAAGCCCATGCCATACCTTGTCAAGACTGTCAAAGTGGTTGTGGTTAGGTCAAACTGGTTTTGGTTCTGATGGTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR TCA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCAGATGGATTTTCACCTaGGTGGGACCCAGGCAAAAA +
Preference number: 2 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSRWIFT*VGPRQK
Trigger: TTTTTGCCTGGGTCCCACTCAGGTGAAAATCCATCT...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR GCA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCTCTGAAACTGGTCTGTaGCAATCGGGTAACACCAAG +
Preference number: 2 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSSETGL*QSGNTK
Trigger: CTTGGTGTTACCCGATTGGCACAGACCAGTTTCAGA...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR GCA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATACCCAGAGGCAGCCTTaGCACCCTAACCTCTTGCTG +
Preference number: 2 (lower is better)
Translates to: PGSHILLCALRSLFMFLYTQRQP*HPNLLL
Trigger: CAGCAAGAGGTTAGGGTGGCAAGGCTGCCTCTGGGT...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CCA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATGAACGTTGGGGAGAGTaGCCCACAGAATGGACCCAG +
Preference number: 2 (lower is better)
Translates to: PGSHILLCALRSLFMFLYERWGE*PTEWTQ
Trigger: CTGGGTCCATTCTGTGGGCCACTCTCCCCAACGTTC...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CCA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAATCCTCCAGCAGAACTTaGCCATGCCGGTCTTCATGT +
Preference number: 2 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCESSSRT*PCRSSC
Trigger: ACATGAAGACCGGCATGGCCAAGTTCTGCTGGAGGA...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR TCA 90 bp AACATAGGTGGCTTTGCCCCTCAGACCACAGCATGGGATCATTTGGAATCCCAACCCAAGCACACACACTaGTATTACCAAGCAGGATTC +
Preference number: 2 (lower is better)
Translates to: NIGGFAPQTTAWDHLESQPKHTH*YYQAGF
Trigger: GAATCCTGCTTGGTAATATCAGTGTGTGTGCTTGGG...TTGGGATTCCAAATGATCCCATGCTGTGGTCTGAGGGGCAAAGCCACCTATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR-3UTR TCA 90 bp AGTTTTGTGGCTGGGTTGAGAGGCACTACCCTGCCTGAGCTACTGTGCAGCATGATGAGATATGTAGAATaGTATGTGACCACAATGGGG +
Preference number: 2 (lower is better)
Translates to: SFVAGLRGTTLPELLCSMMRYVE*YVTTMG
Trigger: CCCCATTGTGGTCACATATCATTCTACATATCTCAT...CATGCTGCACAGTAGCTCAGGCAGGGTAGTGCCTCTCAACCCAGCCACAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR-3UTR GCA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGTCTACCCCCAGAAGCTaGAATTTGGCATTCGTCCTA +
Preference number: 2 (lower is better)
Translates to: NKREGPRSTECWVGMLMESTPRS*NLAFVL
Trigger: TAGGACGAATGCCAAATTGCAGCTTCTGGGGGTAGA...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CCA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAAGTGCTAAAGCAAGCGTaGGATGATCCTACCTACCTC +
Preference number: 2 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCEVLKQA*DDPTYL
Trigger: GAGGTAGGTAGGATCATCCCACGCTTGCTTTAGCAC...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CCA 90 bp GGTGTGGCAAAGCCATCGACATTACAAGATGAAGAACTGAGTCCACTGAACAGCGTGCTAAAGCAAGCGTaGGATGATCCTACCTACCTC +
Preference number: 2 (lower is better)
Translates to: GVAKPSTLQDEELSPLNSVLKQA*DDPTYL
Trigger: GAGGTAGGTAGGATCATCCCACGCTTGCTTTAGCAC...GCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CCA 90 bp AGCACACACACTGATATTACCAAGCAGGATTCAGCCCTGAGTCTCCACAAGGGAGAAGCACTGACAGGTTaGCTCGGCCCCAATTTATTA +
Preference number: 2 (lower is better)
Translates to: STHTDITKQDSALSLHKGEALTG*LGPNLL
Trigger: TAATAAATTGGGGCCGAGCCAACCTGTCAGTGCTTC...TCCCTTGTGGAGACTCAGGGCTGAATCCTGCTTGGTAATATCAGTGTGTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR-3UTR TCA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCAGGAAAGTTGTGTTATaGCTCCAGACAGTAGGTTGT +
Preference number: 2 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSRKVVL*LQTVGC
Trigger: ACAACCTACTGTCTGGAGTCATAACACAACTTTCCT...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR TCA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAACATGTTCCTCTATTCTaGGGGCCTGTGCATTTGAAC +
Preference number: 2 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCEHVPLF*GPVHLN
Trigger: GTTCAAATGCACAGGCCCTCAGAATAGAGGAACATG...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR TCA 90 bp AACATAGGTGGCTTTGCCCCTCAGACCACAGCATGGGATCATTTGGAATCCCAAAGCACAGAGTTAGAATaGGGGGAATGTGTGGTGATT +
Preference number: 2 (lower is better)
Translates to: NIGGFAPQTTAWDHLESQSTELE*GECVVI
Trigger: AATCACCACACATTCCCCTCATTCTAACTCTGTGCT...TTGGGATTCCAAATGATCCCATGCTGTGGTCTGAGGGGCAAAGCCACCTATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR-3UTR GCA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAAAGCAGAACTTGGCCATaGCGGTCTTCATGTGAATAC +
Preference number: 2 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCESRTWP*RSSCEY
Trigger: GTATTCACATGAAGACCGGCATGGCCAAGTTCTGCT...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR GCA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTTATACACCACAGCCCTaGAGGGTCCAGTGGCCCTGC +
Preference number: 2 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGYTPQP*RVQWPC
Trigger: GCAGGGCCACTGGACCCTGCAGGGCTGTGGTGTATA...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR GCA 90 bp CGCCAACATAGGTGGCTTTGCCCCTCAGACCACAGCATGGGATCATTTGGAATCACATGGGCACTTAAATaGTTAATTGCAAGCAAAGCC +
Preference number: 2 (lower is better)
Translates to: RQHRWLCPSDHSMGSFGITWALK*LIASKA
Trigger: GGCTTTGCTTGCAATTAAGCATTTAAGTGCCCATGT...GATTCCAAATGATCCCATGCTGTGGTCTGAGGGGCAAAGCCACCTATGTTGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR-3UTR CCA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGCGTGTGTGTGTCTGTaGTGTTGGAAATGCTCTGGT +
Preference number: 2 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSACVCL*CWKCSG
Trigger: ACCAGAGCATTTCCAACACCACAGACACACACACGC...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CCA 90 bp CAGACACCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTGCGTGTGTGTGTCTGTaGTGTTGGAAATGCTCTGGT +
Preference number: 2 (lower is better)
Translates to: QTPRLSHSTVCSKISLHVACVCL*CWKCSG
Trigger: ACCAGAGCATTTCCAACACCACAGACACACACACGC...AACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGGTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CCA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTGGCATGGGCTTGGCCTaGTGTGGCAAAGCCATCGAC +
Preference number: 2 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGGMGLA*CGKAID
Trigger: GTCGATGGCTTTGCCACACCAGGCCAAGCCCATGCC...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CCA 90 bp AGTTTTGTGGCTGGGTTGAGAGGCACTACCCTGCCTGAGCTACTGTGCAGCATGAAACTCCTTATGAAGTaGCACAAAAGTATCTGTGAG +
Preference number: 2 (lower is better)
Translates to: SFVAGLRGTTLPELLCSMKLLMK*HKSICE
Trigger: CTCACAGATACTTTTGTGCCACTTCATAAGGAGTTT...CATGCTGCACAGTAGCTCAGGCAGGGTAGTGCCTCTCAACCCAGCCACAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR CAA 90 bp GCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTaGTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCT +
Preference number: 2 (lower is better)
Translates to: AKDTREMRCVCVHVC*CVCVRVCVCGVGNA
Trigger: AGCATTTCCAACACCACAGACACACACACGCACGCACACACACAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR GCA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTCTGTGGTGTTGGAAATaGTCTGGTGAAGCTGCTGTG +
Preference number: 2 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELLWCWK*SGEAAV
Trigger: CACAGCAGCTTCACCAGAGCATTTCCAACACCACAG...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR GCA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTAGGGTCCAGTGGCCCTaGTCGTCACACTTGAGTGCT +
Preference number: 2 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGRVQWP*SSHLSA
Trigger: AGCACTCAAGTGTGACGAGCAGGGCCACTGGACCCT...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCGGGCTTGGCCTGGTGTaGCAAAGCCATCGACATTAC +
Preference number: 2 (lower is better)
Translates to: VVSMFHLVKSFITREKAPGLGLV*QSHRHY
Trigger: GTAATGTCGATGGCTTTGCCACACCAGGCCAAGCCC...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CCA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTGGTATGGCATGGGCTTaGCCTGGTGTGGCAAAGCCA +
Preference number: 2 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGGMAWA*PGVAKP
Trigger: TGGCTTTGCCACACCAGGCCAAGCCCATGCCATACC...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR TCA 90 bp CAGACACCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTAGTCTACGTGGGAATTaGATTCAGCTAGAAAGGGTG +
Preference number: 2 (lower is better)
Translates to: QTPRLSHSTVCSKISLHVSLRGN*IQLERV
Trigger: CACCCTTTCTAGCTGAATTCAATTCCCACGTAGACT...AACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGGTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR TCA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTACTGAATACTGCAAATTaGGATCTACCCCCAGAAGCT +
Preference number: 2 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLLNTAN*DLPPEA
Trigger: AGCTTCTGGGGGTAGATCTCAATTTGCAGTATTCAG...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR TCA 90 bp CAGACACCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCTGAATACTGCAAATTaGGATCTACCCCCAGAAGCT +
Preference number: 2 (lower is better)
Translates to: QTPRLSHSTVCSKISLHVLNTAN*DLPPEA
Trigger: AGCTTCTGGGGGTAGATCTCAATTTGCAGTATTCAG...AACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGGTGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR TCA 90 bp GGTGTGGCAAAGCCATCGACATTACAAGATGAAGAACTGAGTCCACTGAACAGCAGGAAAGTTGTGTTATaGCTCCAGACAGTAGGTTGT +
Preference number: 2 (lower is better)
Translates to: GVAKPSTLQDEELSPLNSRKVVL*LQTVGC
Trigger: ACAACCTACTGTCTGGAGTCATAACACAACTTTCCT...GCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR TCA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGAACATAACCCCACATTaGGCAAATGACAAGACCATT +
Preference number: 2 (lower is better)
Translates to: NKREGPRSTECWVGMLMENITPH*ANDKTI
Trigger: AATGGTCTTGTCATTTGCTCAATGTGGGGTTATGTT...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CCA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTGTGTGTCTGTGGTGTTaGAAATGCTCTGGTGAAGCT +
Preference number: 2 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFVCLWC*KCSGEA
Trigger: AGCTTCACCAGAGCATTTCCAACACCACAGACACAC...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CCA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTGTGTGTCTGTGGTGTTaGAAATGCTCTGGTGAAGCT +
Preference number: 2 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELVCLWC*KCSGEA
Trigger: AGCTTCACCAGAGCATTTCCAACACCACAGACACAC...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CCA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTGTGTGTCTGTGGTGTTaGAAATGCTCTGGTGAAGCT +
Preference number: 2 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPVCLWC*KCSGEA
Trigger: AGCTTCACCAGAGCATTTCCAACACCACAGACACAC...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCACAGATGCAGGCAGGTaGCGGCTAATCAGAAAGTGG +
Preference number: 2 (lower is better)
Translates to: VVSMFHLVKSFITREKAPTDAGR*RLIRKW
Trigger: CCACTTTCTGATTAGCCGCCACCTGCCTGCATCTGT...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CCA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAACACAAAGGGGATGTGTaGGGTAATAATGTGTGTTCA +
Preference number: 2 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCEHKGDV*GNNVCS
Trigger: TGAACACACATTATTACCCCACACATCCCCTTTGTG...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCTCCTCCAGCAGAACTTaGCCATGCCGGTCTTCATGT +
Preference number: 2 (lower is better)
Translates to: VVSMFHLVKSFITREKAPSSSRT*PCRSSC
Trigger: ACATGAAGACCGGCATGGCCAAGTTCTGCTGGAGGA...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR TCA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTTTGGAAATGCTCTGGTaGAGCTGCTGTGTCACTTTT +
Preference number: 2 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELLEMLW*SCCVTF
Trigger: AAAAGTGACACAGCAGCTTCACCAGAGCATTTCCAA...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR TCA 90 bp GGTGTGGCAAAGCCATCGACATTACAAGATGAAGAACTGAGTCCACTGAACAGCAACATAACCCCACATTaGGCAAATGACAAGACCATT +
Preference number: 2 (lower is better)
Translates to: GVAKPSTLQDEELSPLNSNITPH*ANDKTI
Trigger: AATGGTCTTGTCATTTGCTCAATGTGGGGTTATGTT...GCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR GCA 90 bp ATATTTAGGTTTGAACCCAAAATGCAACAAGTAGCAGATATGCAGAAACTTCTCCCCTTCGAGCTTAGGTaGACTGGGTTCCCCTTCTGC +
Preference number: 2 (lower is better)
Translates to: IFRFEPKMQQVADMQKLLPFELR*TGFPFC
Trigger: GCAGAAGGGGAACCCAGTGCACCTAAGCTCGAAGGG...GAGAAGTTTCTGCATATCTGCTACTTGTTGCATTTTGGGTTCAAACCTAAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531817.5
3UTR-3UTR CCA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGCCAGAAGCTGCAATTTaGCATTCGTCCTATAAAATA +
Preference number: 2 (lower is better)
Translates to: NKREGPRSTECWVGMLMEPEAAI*HSSYKI
Trigger: TATTTTATAGGACGAATGCCAAATTGCAGCTTCTGG...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CCA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGTCACCTTGTAAACACTaGAAAACAAAGTTGGCAGAA +
Preference number: 2 (lower is better)
Translates to: NKREGPRSTECWVGMLMESPCKH*KTKLAE
Trigger: TTCTGCCAACTTTGTTTTCCAGTGTTTACAAGGTGA...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CCA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTCGGCTAATCAGAAAGTaGTCTAACCCCCAAAGAAAC +
Preference number: 2 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPRLIRK*SNPQRN
Trigger: GTTTCTTTGGGGGTTAGACCACTTTCTGATTAGCCG...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CCA 90 bp GAATTCTTCCTCTGCTACATCATATTTAGGTTTGAACCCAAAATGCAACAAGTACAGCAGCTGTGGCCATaGTGGTCCTGCCAGGTTCTT +
Preference number: 2 (lower is better)
Translates to: EFFLCYIIFRFEPKMQQVQQLWP*WSCQVL
Trigger: AAGAACCTGGCAGGACCACCATGGCCACAGCTGCTG...TACTTGTTGCATTTTGGGTTCAAACCTAAATATGATGTAGCAGAGGAAGAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
3UTR-3UTR TCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCAAGACACTAATTCCCTaGAGCACACATGCTCTTCCG +
Preference number: 2 (lower is better)
Translates to: VVSMFHLVKSFITREKAPKTLIP*STHALP
Trigger: CGGAAGAGCATGTGTGCTTCAGGGAATTAGTGTCTT...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR GCA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGCTGTGGTGTTGGAAATaGTCTGGTGAAGCTGCTGTG +
Preference number: 2 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLLWCWK*SGEAAV
Trigger: CACAGCAGCTTCACCAGAGCATTTCCAACACCACAG...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR GCA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTCTGTGGTGTTGGAAATaGTCTGGTGAAGCTGCTGTG +
Preference number: 2 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGLWCWK*SGEAAV
Trigger: CACAGCAGCTTCACCAGAGCATTTCCAACACCACAG...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR GCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCTCTACCCCCAGAAGCTaGAATTTGGCATTCGTCCTA +
Preference number: 2 (lower is better)
Translates to: VVSMFHLVKSFITREKAPSTPRS*NLAFVL
Trigger: TAGGACGAATGCCAAATTGCAGCTTCTGGGGGTAGA...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR GCA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAATCACATTCTACTGTGTaGTCTAAGATCTCTCTTCAT +
Preference number: 2 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCESHSTV*SKISLH
Trigger: ATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGA...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CCA 90 bp TGGCGGCTAATCAGAAAGTGGTCTAACCCCCAAAGAAACACAAAAATAACCAAAGTGTGTCTGTGGTGTTaGAAATGCTCTGGTGAAGCT +
Preference number: 2 (lower is better)
Translates to: WRLIRKWSNPQRNTKITKVCLWC*KCSGEA
Trigger: AGCTTCACCAGAGCATTTCCAACACCACAGACACAC...TTTGGTTATTTTTGTGTTTCTTTGGGGGTTAGACCACTTTCTGATTAGCCGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CCA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGGCGTGTGTGTGTCTGTaGTGTTGGAAATGCTCTGGT +
Preference number: 2 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLACVCL*CWKCSG
Trigger: ACCAGAGCATTTCCAACACCACAGACACACACACGC...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CCA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTGCGTGTGTGTGTCTGTaGTGTTGGAAATGCTCTGGT +
Preference number: 2 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGACVCL*CWKCSG
Trigger: ACCAGAGCATTTCCAACACCACAGACACACACACGC...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR TCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACATTGGAAATGCTCTGGTaGAGCTGCTGTGTCACTTTT +
Preference number: 2 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTLEMLW*SCCVTF
Trigger: AAAAGTGACACAGCAGCTTCACCAGAGCATTTCCAA...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR TCA 90 bp TGGCGGCTAATCAGAAAGTGGTCTAACCCCCAAAGAAACACAAAAATAACCAAAAGTCTACGTGGGAATTaGATTCAGCTAGAAAGGGTG +
Preference number: 2 (lower is better)
Translates to: WRLIRKWSNPQRNTKITKSLRGN*IQLERV
Trigger: CACCCTTTCTAGCTGAATTCAATTCCCACGTAGACT...TTTGGTTATTTTTGTGTTTCTTTGGGGGTTAGACCACTTTCTGATTAGCCGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR TCA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTAGATGGATTTTCACCTaGGTGGGACCCAGGCAAAAA +
Preference number: 2 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGRWIFT*VGPRQK
Trigger: TTTTTGCCTGGGTCCCACTCAGGTGAAAATCCATCT...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR GCA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTTCTACCCCCAGAAGCTaGAATTTGGCATTCGTCCTA +
Preference number: 2 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGSTPRS*NLAFVL
Trigger: TAGGACGAATGCCAAATTGCAGCTTCTGGGGGTAGA...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR GCA 90 bp ACGTTTAGCAATTTGGGAAAACCAACGAGAGATGTCATTTGCATTGCTTTTGAGTTCACCATTTCAAAATaGCTGGCCTGGGAATTGGGG +
Preference number: 2 (lower is better)
Translates to: TFSNLGKPTRDVICIAFEFTISK*LAWELG
Trigger: CCCCAATTCCCAGGCCAGGCATTTTGAAATGGTGAA...CTCAAAAGCAATGCAAATGACATCTCTCGTTGGTTTTCCCAAATTGCTAAACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529356.5
3UTR-3UTR CCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCGCGTGTGTGTGTCTGTaGTGTTGGAAATGCTCTGGT +
Preference number: 2 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFIACVCL*CWKCSG
Trigger: ACCAGAGCATTTCCAACACCACAGACACACACACGC...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR TCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTTTGGAAATGCTCTGGTaGAGCTGCTGTGTCACTTTT +
Preference number: 2 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFLEMLW*SCCVTF
Trigger: AAAAGTGACACAGCAGCTTCACCAGAGCATTTCCAA...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR TCA 90 bp CGTTTAGCAATTTGGGAAAACCAACGAGAGATGTCATTTGCATTGCTTTTGAGAAGATCACTAACTCTGTaGCTTTATGGTCCAGAGCCA +
Preference number: 2 (lower is better)
Translates to: RLAIWENQREMSFALLLRRSLTL*LYGPEP
Trigger: TGGCTCTGGACCATAAAGTCACAGAGTTAGTGATCT...TCTCAAAAGCAATGCAAATGACATCTCTCGTTGGTTTTCCCAAATTGCTAAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529356.5
3UTR-3UTR GCA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAATCTGAAACTGGTCTGTaGCAATCGGGTAACACCAAG +
Preference number: 2 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQSETGL*QSGNTK
Trigger: CTTGGTGTTACCCGATTGGCACAGACCAGTTTCAGA...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CCA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAAGTGTGTCTGTGGTGTTaGAAATGCTCTGGTGAAGCT +
Preference number: 2 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQVCLWC*KCSGEA
Trigger: AGCTTCACCAGAGCATTTCCAACACCACAGACACAC...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CCA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATCCAGAAGCTGCAATTTaGCATTCGTCCTATAAAATA +
Preference number: 2 (lower is better)
Translates to: PGSHILLCALRSLFMFLYPEAAI*HSSYKI
Trigger: TATTTTATAGGACGAATGCCAAATTGCAGCTTCTGG...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CCA 90 bp CGTTTAGCAATTTGGGAAAACCAACGAGAGATGTCATTTGCATTGCTTTTGAGAGCCTGGCCTGGGAATTaGGGGCAATTTATTTCTATT +
Preference number: 2 (lower is better)
Translates to: RLAIWENQREMSFALLLRAWPGN*GQFISI
Trigger: AATAGAAATAAATTGCCCCCAATTCCCAGGCCAGGC...TCTCAAAAGCAATGCAAATGACATCTCTCGTTGGTTTTCCCAAATTGCTAAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529356.5
3UTR-3UTR CCA 90 bp GAATTCTTCCTCTGCTACATCATATTTAGGTTTGAACCCAAAATGCAACAAGTAGGGAGTCACCCCGATTaGGAGACAAACACCTTTCAA +
Preference number: 2 (lower is better)
Translates to: EFFLCYIIFRFEPKMQQVGSHPD*ETNTFQ
Trigger: TTGAAAGGTGTTTGTCTCCCAATCGGGGTGACTCCC...TACTTGTTGCATTTTGGGTTCAAACCTAAATATGATGTAGCAGAGGAAGAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR-3UTR TCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTTGGAAATGCTCTGGTaGAGCTGCTGTGTCACTTTT +
Preference number: 2 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFILEMLW*SCCVTF
Trigger: AAAAGTGACACAGCAGCTTCACCAGAGCATTTCCAA...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR TCA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAAAGTCTACGTGGGAATTaGATTCAGCTAGAAAGGGTG +
Preference number: 2 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQSLRGN*IQLERV
Trigger: CACCCTTTCTAGCTGAATTCAATTCCCACGTAGACT...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR GCA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATAAGGGTGACACACTTTaGATACTGAACAAATACAAA +
Preference number: 2 (lower is better)
Translates to: PGSHILLCALRSLFMFLYKGDTL*ILNKYK
Trigger: TTTGTATTTGTTCAGTATGCAAAGTGTGTCACCCTT...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR GCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCAAGAAGTCTGAATACTaGAAATTGAGATCTACCCCC +
Preference number: 2 (lower is better)
Translates to: VVSMFHLVKSFITREKAPKKSEY*KLRSTP
Trigger: GGGGGTAGATCTCAATTTGCAGTATTCAGACTTCTT...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR TCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAATTGGAAATGCTCTGGTaGAGCTGCTGTGTCACTTTT +
Preference number: 2 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKLEMLW*SCCVTF
Trigger: AAAAGTGACACAGCAGCTTCACCAGAGCATTTCCAA...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR GCA 90 bp CAACAAGTAGCAGATATGCAGAAACTTCTCTGTAAATCTAGCATGATGGTTTTTTCTGCCTTCTTGTTCTaGTTGATGGGATGTATGCCA +
Preference number: 2 (lower is better)
Translates to: QQVADMQKLLCKSSMMVFSAFLF*LMGCMP
Trigger: TGGCATACATCCCATCAAGCAGAACAAGAAGGCAGA...AAAAACCATCATGCTAGATTTACAGAGAAGTTTCTGCATATCTGCTACTTGTTG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000531817.5
3UTR-3UTR CCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCCCAGAAGCTGCAATTTaGCATTCGTCCTATAAAATA +
Preference number: 2 (lower is better)
Translates to: VVSMFHLVKSFITREKAPPEAAI*HSSYKI
Trigger: TATTTTATAGGACGAATGCCAAATTGCAGCTTCTGG...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
39% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCTCACCTTGTAAACACTaGAAAACAAAGTTGGCAGAA +
Preference number: 2 (lower is better)
Translates to: VVSMFHLVKSFITREKAPSPCKH*KTKLAE
Trigger: TTCTGCCAACTTTGTTTTCCAGTGTTTACAAGGTGA...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR GCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCAAGGGTGACACACTTTaGATACTGAACAAATACAAA +
Preference number: 2 (lower is better)
Translates to: VVSMFHLVKSFITREKAPKGDTL*ILNKYK
Trigger: TTTGTATTTGTTCAGTATGCAAAGTGTGTCACCCTT...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR GCA 90 bp ATCCACTCCCAACACAGCTTGCTTGCTCATCCTAAAATGATACTATTGCTAAGTGTCTGGTTATTAAACTaGAATGGTGAGTTAAACTGT +
Preference number: 2 (lower is better)
Translates to: IHSQHSLLAHPKMILLLSVWLLN*NGELNC
Trigger: ACAGTTTAACTCACCATTGCAGTTTAATAACCAGAC...ACTTAGCAATAGTATCATTTTAGGATGAGCAAGCAAGCTGTGTTGGGAGTGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529356.5
3UTR CAA 90 bp GTTTTAGGAAATAATATGGATTTGTTCATCCACTCCCAACACAGCTaGCTTGCTCATCCTAAAATGATACTATTGCTAAGTAATGTCTAC +
Preference number: 2 (lower is better)
Translates to: VLGNNMDLFIHSQHS*LAHPKMILLLSNVY
Trigger: GTAGACATTACTTAGCAATAGTATCATTTTAGGATGAGCAAGCAAGCTGTGTTGGGAGTGGATGAACAAATCCATATTATTTCCTAAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529356.5
3UTR GCA 72 bp CTGAGTCCACTGAACAGCCTGGTGACCAGAAGAGCCTaGCCCTCACTGCTGGGCCCTCCCGGTCTCAGACAC +
Preference number: 3 (lower is better)
Translates to: LSPLNSLVTRRA*PSLLGPPGLRH
Trigger: GTGTCTGAGACCGGGAGGGCCCAGCAGTGAGGGGCAGGCTCTTCTGGTCACCAGGCTGTTCAGTGGACTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR TCA 72 bp TGTGGGTCACTGCTGAACCACGGCCCCACTCTGTGCTaGTCTGCGACATGCTGCCAGGCAGCAGGGGAGTCA +
Preference number: 3 (lower is better)
Translates to: CGSLLNHGPTLC*SATCCQAAGES
Trigger: TGACTCCCCTGCTGCCTGGCAGCATGTCGCAGATCAGCACAGAGTGGGGCCGTGGTTCAGCAGTGACCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR CCA 72 bp GGTCCCTTCAGAAAGATGGACACTGCCCCTCTCCTGTaGGTGGTCCTGGGATCAGGGGGAGGCAGACTCCCA +
Preference number: 3 (lower is better)
Translates to: GPFRKMDTAPLL*VVLGSGGGRLP
Trigger: TGGGAGTCTGCCTCCCCCTGATCCCAGGACCACCCACAGGAGAGGGGCAGTGTCCATCTTTCTGAAGGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR TCA 72 bp GGGGGAGGCAGACTCCCAAGCTGGGCCCTCCTAGGATaGAGCCGTGTGACTTCTGCCCAAGGTGATCCTAAG +
Preference number: 3 (lower is better)
Translates to: GGGRLPSWALLG*SRVTSAQGDPK
Trigger: CTTAGGATCACCTTGGGCAGAAGTCACACGGCTTCATCCTAGGAGGGCCCAGCTTGGGAGTCTGCCTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR TCA 72 bp GTCCGTGGGGAGTGGGTATGCGCTAGTGCTGCCTCCTaGGGAGCGCACTGTTACAAGCCGTGGGTCTGTCTA +
Preference number: 3 (lower is better)
Translates to: VRGEWVCASAAS*GAHCYKPWVCL
Trigger: TAGACAGACCCACGGCTTGTAACAGTGCGCTCCTCAGGAGGCAGCACTAGCGCATACCCACTCCCCACGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR GCA 72 bp CTGCAGGGTCCAGTGGCCCTGCTCGTCACACTTGAGTaGTCCTCCAGCAGAACTTGGCCATGCCGGTCTTCA +
Preference number: 3 (lower is better)
Translates to: LQGPVALLVTLE*SSSRTWPCRSS
Trigger: TGAAGACCGGCATGGCCAAGTTCTGCTGGAGGAGCACTCAAGTGTGACGAGCAGGGCCACTGGACCCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR CCA 72 bp CATGACGTGGTCACTGCCAGACGGGAGCCTGATCTCTaGTTTCCACTCGGAGGAGAGCGCTCGGTACCTGAC +
Preference number: 3 (lower is better)
Translates to: HDVVTARREPDL*FPLGGERSVPD
Trigger: GTCAGGTACCGAGCGCTCTCCTCCGAGTGGAAACCAGAGATCAGGCTCCCGTCTGGCAGTGACCACGTCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531817.5
3UTR TCA 72 bp TCTGGGACTCCAGCGGGGAGAGTTTTGTGGCTGGGTTaGGAGGCACTACCCTGCCTGAGCTACTGTGCAGCA +
Preference number: 3 (lower is better)
Translates to: SGTPAGRVLWLG*EALPCLSYCAA
Trigger: TGCTGCACAGTAGCTCAGGCAGGGTAGTGCCTCTCAACCCAGCCACAAAACTCTCCCCGCTGGAGTCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR TCA 72 bp TGCCCAAAAACCATGCCTGCCTCCACTGCCCTGGTGTaGAGCGCCATCTGGGACTCCAGCGGGGAGAGTTTT +
Preference number: 3 (lower is better)
Translates to: CPKTMPASTALV*SAIWDSSGESF
Trigger: AAAACTCTCCCCGCTGGAGTCCCAGATGGCGCTTCACACCAGGGCAGTGGAGGCAGGCATGGTTTTTGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR GCA 72 bp GCTGGGTTGAGAGGCACTACCCTGCCTGAGCTACTGTaGAGCATGGAGCCTCTGATGTCTGCACGTGAGCCT +
Preference number: 3 (lower is better)
Translates to: AGLRGTTLPELL*SMEPLMSAREP
Trigger: AGGCTCACGTGCAGACATCAGAGGCTCCATGCTGCACAGTAGCTCAGGCAGGGTAGTGCCTCTCAACCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR GCA 72 bp TCCCACACTGACCTGGGATCCTTATGCTCTGCCCTGTaGCCAAAAACCATGCCTGCCTCCACTGCCCTGGTG +
Preference number: 3 (lower is better)
Translates to: SHTDLGSLCSAL*PKTMPASTALV
Trigger: CACCAGGGCAGTGGAGGCAGGCATGGTTTTTGGGCACAGGGCAGAGCATAAGGATCCCAGGTCAGTGTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR GCA 72 bp GAGATCTCCAAAGGGTCCCTTCAGAAAGATGGACACTaGCCCTCTCCTGTGGGTGGTCCTGGGATCAGGGGG +
Preference number: 3 (lower is better)
Translates to: EISKGSLQKDGH*PSPVGGPGIRG
Trigger: CCCCCTGATCCCAGGACCACCCACAGGAGAGGGGCAGTGTCCATCTTTCTGAAGGGACCCTTTGGAGATCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR CCA 72 bp GCTGCACTATATACACCACAGCCCTGCAGGGTCCAGTaGCCCTGCTCGTCACACTTGAGTGCTCCTCCAGCA +
Preference number: 3 (lower is better)
Translates to: AALYTPQPCRVQ*PCSSHLSAPPA
Trigger: TGCTGGAGGAGCACTCAAGTGTGACGAGCAGGGCCACTGGACCCTGCAGGGCTGTGGTGTATATAGTGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CAA 90 bp GGGAGTGGGTATGCGCTAGTGCTGCCTCCTGAGGAGCGCACTGTTACAAGCCGTAGTTTTGTGGCTGGGTaGAGAGGCACTACCCTGCCT +
Preference number: 3 (lower is better)
Translates to: GSGYALVLPPEERTVTSRSFVAG*RGTTLP
Trigger: AGGCAGGGTAGTGCCTCTCAACCCAGCCACAAAACT...ACGGCTTGTAACAGTGCGCTCCTCAGGAGGCAGCACTAGCGCATACCCACTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR-3UTR CAA 90 bp CCTGGTGTGAAGCGCCATCTGGGACTCCAGCGGGGAGAGTTTTGTGGCTGGGTTGGAAGCACTGACAGGTaGGCTCGGCCCCAATTTATT +
Preference number: 3 (lower is better)
Translates to: PGVKRHLGLQRGEFCGWVGSTDR*ARPQFI
Trigger: AATAAATTGGGGCCGAGCCAACCTGTCAGTGCTTCC...AACCCAGCCACAAAACTCTCCCCGCTGGAGTCCCAGATGGCGCTTCACACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR TCA 72 bp GGTTCTAGGGGGTCAGCTGTCCCGGGCCAGGTGATCTaGGGGCTGACCTGTTTCTTCCTAACCATCAGAACC +
Preference number: 3 (lower is better)
Translates to: GSRGSAVPGQVI*GLTCFFLTIRT
Trigger: GGTTCTGATGGTTAGGAAGAAACAGGTCAGCCCTCAGATCACCTGGCCCGGGACAGCTGACCCCCTAGAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR GCA 72 bp ATCCTTATGCTCTGCCCTGTGCCCAAAAACCATGCCTaGCTCCACTGCCCTGGTGTGAAGCGCCATCTGGGA +
Preference number: 3 (lower is better)
Translates to: ILMLCPVPKNHA*LHCPGVKRHLG
Trigger: TCCCAGATGGCGCTTCACACCAGGGCAGTGGAGGCAGGCATGGTTTTTGGGCACAGGGCAGAGCATAAGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR CCA 72 bp CCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTaGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATC +
Preference number: 3 (lower is better)
Translates to: PHRMVAQQLWPW*SCQVLPKGALI
Trigger: GATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
3UTR CCA 72 bp CTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATaGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTG +
Preference number: 3 (lower is better)
Translates to: LPHRMVAQQLWP*WSCQVLPKGAL
Trigger: CAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
3UTR TCA 72 bp ATGGCTGTGGGCTGGGCCGAGGTCCTGAACACAAAATaGGCCGCCTTGGATTTTCCTTGCTGGTTCTCAGCC +
Preference number: 3 (lower is better)
Translates to: MAVGWAEVLNTK*AALDFPCWFSA
Trigger: GGCTGAGAACCAGCAAGGAAAATCCAAGGCGGCTCATTTTGTGTTCAGGACCTCGGCCCAGCCCACAGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531817.5
3UTR TCA 72 bp AGGTTGCTGGGATGGCTGTGGGCTGGGCCGAGGTCCTaGACACAAAATGAGCCGCCTTGGATTTTCCTTGCT +
Preference number: 3 (lower is better)
Translates to: RLLGWLWAGPRS*TQNEPPWIFLA
Trigger: AGCAAGGAAAATCCAAGGCGGCTCATTTTGTGTTCAGGACCTCGGCCCAGCCCACAGCCATCCCAGCAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531817.5
3UTR GCA 72 bp TCCACCTCCAAAGCTGCACTATATACACCACAGCCCTaGAGGGTCCAGTGGCCCTGCTCGTCACACTTGAGT +
Preference number: 3 (lower is better)
Translates to: STSKAALYTPQP*RVQWPCSSHLS
Trigger: ACTCAAGTGTGACGAGCAGGGCCACTGGACCCTGCAGGGCTGTGGTGTATATAGTGCAGCTTTGGAGGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR GCA 72 bp ACCCTTGAGGACCCTGACATTGTTTCAGCTGAGGCCTaGCTGACCCTGGGATGTGTTGAGATGACAGGGCCA +
Preference number: 3 (lower is better)
Translates to: TLEDPDIVSAEA*LTLGCVEMTGP
Trigger: TGGCCCTGTCATCTCAACACATCCCAGGGTCAGGCAGGCCTCAGCTGAAACAATGTCAGGGTCCTCAAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR CCA 72 bp ATCGCCACTGATCAGACTGCAGAAGTGTCAGAACGTTaGGGAGAGTGGCCCACAGAATGGACCCAGAGGCAG +
Preference number: 3 (lower is better)
Translates to: IATDQTAEVSER*GEWPTEWTQRQ
Trigger: CTGCCTCTGGGTCCATTCTGTGGGCCACTCTCCCCAACGTTCTGACACTTCTGCAGTCTGATCAGTGGCGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR CCA 72 bp CCTTCTCTTCCACACAGAATGGTTGCTCAGCAGCTGTaGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGG +
Preference number: 3 (lower is better)
Translates to: PSLPHRMVAQQL*PWWSCQVLPKG
Trigger: CCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
3UTR-3UTR CAA 90 bp GGCTGGGGCATTCAGGAAGCACTGACAGGTTGGCTCGGCCCCAATTTATTAACCGGGGAGTCACCCCGATaGGGAGACAAACACCTTTCA +
Preference number: 3 (lower is better)
Translates to: GWGIQEALTGWLGPNLLTGESPR*GDKHLS
Trigger: TGAAAGGTGTTTGTCTCCCAATCGGGGTGACTCCCC...GGTTAATAAATTGGGGCCGAGCCAACCTGTCAGTGCTTCCTGAATGCCCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR TCA 72 bp ATGGAGCCTCTGATGTCTGCACGTGAGCCTCTAAACTaGGCGCTGGGGATTAATGGCGAGCGCCAACATAGG +
Preference number: 3 (lower is better)
Translates to: MEPLMSAREPLN*ALGINGERQHR
Trigger: CCTATGTTGGCGCTCGCCATTAATCCCCAGCGCTCAGTTTAGAGGCTCACGTGCAGACATCAGAGGCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR CCA 72 bp TACTCAGCATTCCAGTCCAGGGACTTCAGCATGACGTaGTCACTGCCAGACGGGAGCCTGATCTCTGGTTTC +
Preference number: 3 (lower is better)
Translates to: YSAFQSRDFSMT*SLPDGSLISGF
Trigger: GAAACCAGAGATCAGGCTCCCGTCTGGCAGTGACCACGTCATGCTGAAGTCCCTGGACTGGAATGCTGAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531817.5
3UTR-3UTR CAA 90 bp CCACTGCCCTGGTGTGAAGCGCCATCTGGGACTCCAGCGGGGAGAGTTTTGTGGCAAAGCCAATTATTATaGAAGGGAGGACAAGGAGCA +
Preference number: 3 (lower is better)
Translates to: PLPWCEAPSGTPAGRVLWQSQLL*KGGQGA
Trigger: TGCTCCTTGTCCTCCCTTCAATAATAATTGGCTTTG...CCACAAAACTCTCCCCGCTGGAGTCCCAGATGGCGCTTCACACCAGGGCAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR GCA 72 bp AGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTaGCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTC +
Preference number: 3 (lower is better)
Translates to: RMVAQQLWPWWS*QVLPKGALIFF
Trigger: GAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
3UTR GCA 72 bp CTGGGGATTAATGGCGAGCGCCAACATAGGTGGCTTTaGCCCTCAGACCACAGCATGGGATCATTTGGAATC +
Preference number: 3 (lower is better)
Translates to: LGINGERQHRWL*PSDHSMGSFGI
Trigger: GATTCCAAATGATCCCATGCTGTGGTCTGAGGGGCAAAGCCACCTATGTTGGCGCTCGCCATTAATCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR CCA 72 bp CCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTaGCGGCTAATCAGAAAGTGGTCTAACCCCCAAAGA +
Preference number: 3 (lower is better)
Translates to: PGSRSLFTDAGR*RLIRKWSNPQR
Trigger: TCTTTGGGGGTTAGACCACTTTCTGATTAGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR CCA 72 bp GTGATCCTAAGAGCCAGTAGCTCTCCCACACTGACCTaGGATCCTTATGCTCTGCCCTGTGCCCAAAAACCA +
Preference number: 3 (lower is better)
Translates to: VILRASSSPTLT*DPYALPCAQKP
Trigger: TGGTTTTTGGGCACAGGGCAGAGCATAAGGATCCCAGGTCAGTGTGGGAGAGCTACTGGCTCTTAGGATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR-3UTR CAA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGCTCCTCCAGCAGAACTaGGCCATGCCGGTCTTCATG +
Preference number: 3 (lower is better)
Translates to: NKREGPRSTECWVGMLMELLQQN*AMPVFM
Trigger: CATGAAGACCGGCATGGCCAAGTTCTGCTGGAGGAG...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR GCA 72 bp AGAAAAGCAATGAGACAAAGGTGTAGGATGCAGAATTaGCTCCCAAGGTTGCTGGGATGGCTGTGGGCTGGG +
Preference number: 3 (lower is better)
Translates to: RKAMRQRCRMQN*LPRLLGWLWAG
Trigger: CCCAGCCCACAGCCATCCCAGCAACCTTGGGAGGCAATTCTGCATCCTACACCTTTGTCTCATTGCTTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531817.5
3UTR CCA 72 bp CCTAACCACAACCACTTTGACAGTCTTGACAAGGTATaGCATGGGCTTGGCCTGGTGTGGCAAAGCCATCGA +
Preference number: 3 (lower is better)
Translates to: PNHNHFDSLDKV*HGLGLVWQSHR
Trigger: TCGATGGCTTTGCCACACCAGGCCAAGCCCATGCCATACCTTGTCAAGACTGTCAAAGTGGTTGTGGTTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR CCA 72 bp GCCAACATAGGTGGCTTTGCCCCTCAGACCACAGCATaGGATCATTTGGAATCCCAAAGGGAAAGGCTAGTC +
Preference number: 3 (lower is better)
Translates to: ANIGGFAPQTTA*DHLESQRERLV
Trigger: GACTAGCCTTTCCCTTTGGGATTCCAAATGATCCCATGCTGTGGTCTGAGGGGCAAAGCCACCTATGTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR-3UTR CAA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAACTCCTCCAGCAGAACTaGGCCATGCCGGTCTTCATG +
Preference number: 3 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCELLQQN*AMPVFM
Trigger: CATGAAGACCGGCATGGCCAAGTTCTGCTGGAGGAG...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CAA 90 bp CCATCCTCTCCCATCTGCCCTTCGAGCTTAGGTGCACTGGGTTCCCCTTCTGCTAACTCCCACACAGCTTaGATGCTTGAACACTATGAA +
Preference number: 3 (lower is better)
Translates to: PSSPICPSSLGALGSPSANSHTA*MLEHYE
Trigger: TTCATAGTGTTCAAGCATCAAAGCTGTGTGGGAGTT...AGCAGAAGGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531817.5
3UTR-3UTR CAA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCTGCCACCCTAACCTCTaGCTGCTTTGTACCTTAGGA +
Preference number: 3 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSCHPNL*LLCTLG
Trigger: TCCTAAGGTACAAAGCAGCAAGAGGTTAGGGTGGCA...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CAA 90 bp AGCACACACACTGATATTACCAAGCAGGATTCAGCCCTGAGTCTCCACAAGGGAGGAAGCACTGACAGGTaGGCTCGGCCCCAATTTATT +
Preference number: 3 (lower is better)
Translates to: STHTDITKQDSALSLHKGGSTDR*ARPQFI
Trigger: AATAAATTGGGGCCGAGCCAACCTGTCAGTGCTTCC...TCCCTTGTGGAGACTCAGGGCTGAATCCTGCTTGGTAATATCAGTGTGTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR TCA 72 bp TTGGCCTGGTGTGGCAAAGCCATCGACATTACAAGATaGAGAACTGAGTCCACTGAACAGCCTGGTGACCAG +
Preference number: 3 (lower is better)
Translates to: LAWCGKAIDITR*RTESTEQPGDQ
Trigger: CTGGTCACCAGGCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACCAGGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR TCA 72 bp GGTTCACAGTGGATGCTTCCAACCTGTCCTGTAGACTaGTGCTCAAAGCCATTCTGTGGGTCACTGCTGAAC +
Preference number: 3 (lower is better)
Translates to: GSQWMLPTCPVD*CSKPFCGSLLN
Trigger: GTTCAGCAGTGACCCACAGAATGGCTTTGAGCATCAGTCTACAGGACAGGTTGGAAGCATCCACTGTGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR-3UTR CAA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGACCACTTTGACAGTCTaGACAAGGTATGGCATGGGC +
Preference number: 3 (lower is better)
Translates to: NKREGPRSTECWVGMLMETTLTV*TRYGMG
Trigger: GCCCATGCCATACCTTGTCAAGACTGTCAAAGTGGT...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CAA 90 bp AGTTTTGTGGCTGGGTTGAGAGGCACTACCCTGCCTGAGCTACTGTGCAGCATGCAAAGCCAATTATTATaGAAGGGAGGACAAGGAGCA +
Preference number: 3 (lower is better)
Translates to: SFVAGLRGTTLPELLCSMQSQLL*KGGQGA
Trigger: TGCTCCTTGTCCTCCCTTCAATAATAATTGGCTTTG...CATGCTGCACAGTAGCTCAGGCAGGGTAGTGCCTCTCAACCCAGCCACAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR GCA 72 bp AGGTTCACTTTAATAGAGTTTCCATCCTCTCCCATCTaGCCTTCGAGCTTAGGTGCACTGGGTTCCCCTTCT +
Preference number: 3 (lower is better)
Translates to: RFTLIEFPSSPI*PSSLGALGSPS
Trigger: AGAAGGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGGAAACTCTATTAAAGTGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531817.5
3UTR CCA 72 bp CTGCTCGTCACACTTGAGTGCTCCTCCAGCAGAACTTaGCCATGCCGGTCTTCATGTGAATACATATGTATG +
Preference number: 3 (lower is better)
Translates to: LLVTLECSSSRT*PCRSSCEYICM
Trigger: CATACATATGTATTCACATGAAGACCGGCATGGCCAAGTTCTGCTGGAGGAGCACTCAAGTGTGACGAGCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR CCA 72 bp AAACACCTTTCAAAGCTGACACTTGTTGGCACATCATaGCTTGGCCCCGTTCACAGAGACAGTGTAAGGTGC +
Preference number: 3 (lower is better)
Translates to: KHLSKLTLVGTS*LGPVHRDSVRC
Trigger: GCACCTTACACTGTCTCTGTGAACGGGGCCAAGCCATGATGTGCCAACAAGTGTCAGCTTTGAAAGGTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR-3UTR CAA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCAGGTATGGCATGGGCTaGGCCTGGTGTGGCAAAGCC +
Preference number: 3 (lower is better)
Translates to: VVSMFHLVKSFITREKAPRYGMG*AWCGKA
Trigger: GGCTTTGCCACACCAGGCCAAGCCCATGCCATACCT...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CAA 90 bp GGGGAGCCGCCGTCATCCTGCTTGATCAGGTTCACTTTAATAGAGTTTCCATCCGCCTTCTTGTTCTGCTaGATGGGATGTATGCCATTT +
Preference number: 3 (lower is better)
Translates to: GEPPSSCLIRFTLIEFPSAFLFC*MGCMPF
Trigger: AAATGGCATACATCCCATCAAGCAGAACAAGAAGGC...GGATGGAAACTCTATTAAAGTGAACCTGATCAAGCAGGATGACGGCGGCTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531817.5
3UTR-3UTR CAA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGGAGTCTACGTGGGAATaGAATTCAGCTAGAAAGGGT +
Preference number: 3 (lower is better)
Translates to: NKREGPRSTECWVGMLMEESTWE*NSARKG
Trigger: ACCCTTTCTAGCTGAATTCAATTCCCACGTAGACTC...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CAA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTAACGGAGTGTCCTAGTTaGGCTGTGGGTTTAACCTTT +
Preference number: 3 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLTECPS*AVGLTF
Trigger: AAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CAA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGAGGCTTCGATTCCGTTaGAGTGATTTTTGTTTCCTG +
Preference number: 3 (lower is better)
Translates to: NKREGPRSTECWVGMLMERLRFR*SDFCFL
Trigger: CAGGAAACAAAAATCACTCAAACGGAATCGAAGCCT...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR TCA 72 bp ATTCAACAAAGCCTAAGGAGTCCTTCAAAAGAAGGGTaGGAACGCCTGGGAGCAGATCCCTTTTCACAGATG +
Preference number: 3 (lower is better)
Translates to: IQQSLRSPSKEG*ERLGADPFSQM
Trigger: CATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACCCTTCTTTTGAAGGACTCCTTAGGCTTTGTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR TCA 72 bp GTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATTCTaGGGGCCTGTGCATTTGAACCAGAGATCTGTGCAG +
Preference number: 3 (lower is better)
Translates to: VCSKISLHVPLF*GPVHLNQRSVQ
Trigger: CTGCACAGATCTCTGGTTCAAATGCACAGGCCCTCAGAATAGAGGAACATGAAGAGAGATCTTAGAGCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR TCA 72 bp TTATTCAGTAGAAGGTCCATCCCCAAGCACACACACTaGTATTACCAAGCAGGATTCAGCCCTGAGTCTCCA +
Preference number: 3 (lower is better)
Translates to: LFSRRSIPKHTH*YYQAGFSPESP
Trigger: TGGAGACTCAGGGCTGAATCCTGCTTGGTAATATCAGTGTGTGTGCTTGGGGATGGACCTTCTACTGAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR GCA 72 bp TGCCCATCATGTCAGCAAAACGCTCATGTGAATCAGTaGGGTCTGGCTCTTTTAACATGGGCACTTAAATGC +
Preference number: 3 (lower is better)
Translates to: CPSCQQNAHVNQ*GLALLTWALKC
Trigger: GCATTTAAGTGCCCATGTTAAAAGAGCCAGACCGCACTGATTCACATGAGCGTTTTGCTGACATGATGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR-3UTR CAA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTAGAGTCTACGTGGGAATaGAATTCAGCTAGAAAGGGT +
Preference number: 3 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLESTWE*NSARKG
Trigger: ACCCTTTCTAGCTGAATTCAATTCCCACGTAGACTC...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CAA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGTCATGTTTTGTAAAGTaGTCCTGTGCTAAAGCAAGC +
Preference number: 3 (lower is better)
Translates to: NKREGPRSTECWVGMLMESCFVK*SCAKAS
Trigger: GCTTGCTTTAGCACAGGACAACTTTACAAAACATGA...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CAA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTGAGTCTACGTGGGAATaGAATTCAGCTAGAAAGGGT +
Preference number: 3 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPESTWE*NSARKG
Trigger: ACCCTTTCTAGCTGAATTCAATTCCCACGTAGACTC...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CAA 90 bp CAGACACCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTAGGCTTCGATTCCGTTaGAGTGATTTTTGTTTCCTG +
Preference number: 3 (lower is better)
Translates to: QTPRLSHSTVCSKISLHVRLRFR*SDFCFL
Trigger: CAGGAAACAAAAATCACTCAAACGGAATCGAAGCCT...AACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGGTGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CAA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGTTAAAGGAAAAACTCTaGCATGCTGAGACAAACCTA +
Preference number: 3 (lower is better)
Translates to: NKREGPRSTECWVGMLMELKEKL*HAETNL
Trigger: TAGGTTTGTCTCAGCATGCAAGAGTTTTTCCTTTAA...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR CCA 72 bp TGCCTGGCCTGGGAATTGGGGGCAATTTATTTCTATTaGTGTAATTACCTGGATGTGATTTTACCAGCACCA +
Preference number: 3 (lower is better)
Translates to: CLAWELGAIYFY*CNYLDVILPAP
Trigger: TGGTGCTGGTAAAATCACATCCAGGTAATTACACCAATAGAAATAAATTGCCCCCAATTCCCAGGCCAGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529356.5
3UTR-3UTR CAA 90 bp CAGACACCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTTCATGTTTTGTAAAGTaGTCCTGTGCTAAAGCAAGC +
Preference number: 3 (lower is better)
Translates to: QTPRLSHSTVCSKISLHVSCFVK*SCAKAS
Trigger: GCTTGCTTTAGCACAGGACAACTTTACAAAACATGA...AACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGGTGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR TCA 72 bp TTTGTAAAGTTGTCCTGTGCTAAAGCAAGCGTGGGATaGTCCTACCTACCTCTAGGTGGTATTTGTTACCTT +
Preference number: 3 (lower is better)
Translates to: FVKLSCAKASVG*SYLPLGGICYL
Trigger: AAGGTAACAAATACCACCTAGAGGTAGGTAGGATCATCCCACGCTTGCTTTAGCACAGGACAACTTTACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR CCA 72 bp ATGCTTGAACACTATGAACATGCACGCATACTCATATaGATTCTTCAGGAGATTCAGGTCCTCCACACACAT +
Preference number: 3 (lower is better)
Translates to: MLEHYEHARILI*ILQEIQVLHTH
Trigger: ATGTGTGTGGAGGACCTGAATCTCCTGAAGAATCCATATGAGTATGCGTGCATGTTCATAGTGTTCAAGCAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531817.5
3UTR-3UTR CAA 90 bp TGGCGGCTAATCAGAAAGTGGTCTAACCCCCAAAGAAACACAAAAATAACCAAATCTGAATACTGCAAATaGAGATCTACCCCCAGAAGC +
Preference number: 3 (lower is better)
Translates to: WRLIRKWSNPQRNTKITKSEYCK*RSTPRS
Trigger: GCTTCTGGGGGTAGATCTCAATTTGCAGTATTCAGA...TTTGGTTATTTTTGTGTTTCTTTGGGGGTTAGACCACTTTCTGATTAGCCGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CAA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAAACGGAGTGTCCTAGTTaGGCTGTGGGTTTAACCTTT +
Preference number: 3 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQTECPS*AVGLTF
Trigger: AAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CAA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCCTAACCACAACCACTTaGACAGTCTTGACAAGGTAT +
Preference number: 3 (lower is better)
Translates to: VVSMFHLVKSFITREKAPLTTTT*TVLTRY
Trigger: ATACCTTGTCAAGACTGTCAAAGTGGTTGTGGTTAG...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CAA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAATCTGAATACTGCAAATaGAGATCTACCCCCAGAAGC +
Preference number: 3 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQSEYCK*RSTPRS
Trigger: GCTTCTGGGGGTAGATCTCAATTTGCAGTATTCAGA...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CAA 90 bp ATATTTAGGTTTGAACCCAAAATGCAACAAGTAGCAGATATGCAGAAACTTCTCCCGCCGTCATCCTGCTaGATCAGGTTCACTTTAATA +
Preference number: 3 (lower is better)
Translates to: IFRFEPKMQQVADMQKLLPPSSC*IRFTLI
Trigger: TATTAAAGTGAACCTGATCAAGCAGGATGACGGCGG...GAGAAGTTTCTGCATATCTGCTACTTGTTGCATTTTGGGTTCAAACCTAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531817.5
3UTR-3UTR CAA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCTTAAAGGAAAAACTCTaGCATGCTGAGACAAACCTA +
Preference number: 3 (lower is better)
Translates to: VVSMFHLVKSFITREKAPLKEKL*HAETNL
Trigger: TAGGTTTGTCTCAGCATGCAAGAGTTTTTCCTTTAA...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR-3UTR CAA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAATCATGTTTTGTAAAGTaGTCCTGTGCTAAAGCAAGC +
Preference number: 3 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQSCFVK*SCAKAS
Trigger: GCTTGCTTTAGCACAGGACAACTTTACAAAACATGA...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR TCA 72 bp TGTGGGTTTAACCTTTTTGTCTCATTTTCTTACAAGTaGGTGTGCAACAAAGGGACCCTTTCTATAAACCTA +
Preference number: 3 (lower is better)
Translates to: CGFNLFVSFSYK*VCNKGTLSINL
Trigger: TAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAATGAGACAAAAAGGTTAAACCCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR CCA 72 bp TGCTCTATAAAAGTAACAGAGATACGTTTAGCAATTTaGGAAAACCAACGAGAGATGTCATTTGCATTGCTT +
Preference number: 3 (lower is better)
Translates to: CSIKVTEIRLAI*ENQREMSFALL
Trigger: AAGCAATGCAAATGACATCTCTCGTTGGTTTTCCCAAATTGCTAAACGTATCTCTGTTACTTTTATAGAGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529356.5
3UTR TCA 72 bp AGAAATATTATAAAATCTAAAACTCCCACACAGCTTTaGTGCTTGAACACTATGAACATGCACGCATACTCA +
Preference number: 3 (lower is better)
Translates to: RNIIKSKTPTQL*CLNTMNMHAYS
Trigger: TGAGTATGCGTGCATGTTCATAGTGTTCAAGCATCAAAGCTGTGTGGGAGTTTTAGATTTTATAATATTTCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR TCA 90 bp GGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCCCAGCCCTTTGCCATTaGGCGCCGCCAGCCTTACGG +
Preference number: 4 (lower is better)
Translates to: GCSAAVAMVVLPGSSKGGPALCH*APPALR
Trigger: CCGTAAGGCTGGCGGCGCTCAATGGCAAAGGGCTGG...GCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTGGCCTGAGGTGGGGCTaGCGTTGGCTGGGATGGCTG +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAAGLRWG*RWLGWL
Trigger: CAGCCATCCCAGCCAACGGCAGCCCCACCTCAGGCC...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GGGGCCAGGGCTGTGTGTTCTGGGATCCTCCATTTCCATCCCCAGGAGCTGAGAGGCCTGAGGTGGGGCTaGCGTTGGCTGGGATGGCTG +
Preference number: 4 (lower is better)
Translates to: GARAVCSGILHFHPQELRGLRWG*RWLGWL
Trigger: CAGCCATCCCAGCCAACGGCAGCCCCACCTCAGGCC...TCTCAGCTCCTGGGGATGGAAATGGAGGATCCCAGAACACACAGCCCTGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTTGCCGTTGGCTGGGATaGCTGTGGGCTGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAACRWLG*LWAGPR
Trigger: CCTCGGCCCAGCCCACAGCCATCCCAGCCAACGGCA...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GGGGCCAGGGCTGTGTGTTCTGGGATCCTCCATTTCCATCCCCAGGAGCTGAGACCTGCCCCTCACTGCTaGGCCCTCCCGGTCTCAGAC +
Preference number: 4 (lower is better)
Translates to: GARAVCSGILHFHPQELRPAPHC*ALPVSD
Trigger: GTCTGAGACCGGGAGGGCCCAGCAGTGAGGGGCAGG...TCTCAGCTCCTGGGGATGGAAATGGAGGATCCCAGAACACACAGCCCTGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CCACTGCCCTGGTGTGAAGCGCCATCTGGGACTCCAGCGGGGAGAGTTTTGTGGGCCTCCCAAGGTTGCTaGGATGGCTGTGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PLPWCEAPSGTPAGRVLWASQGC*DGCGLG
Trigger: GCCCAGCCCACAGCCATCCCAGCAACCTTGGGAGGC...CCACAAAACTCTCCCCGCTGGAGTCCCAGATGGCGCTTCACACCAGGGCAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp CCACTGCCCTGGTGTGAAGCGCCATCTGGGACTCCAGCGGGGAGAGTTTTGTGGGTTGACGGTGGCCTCTaGCTCACTGCCATCCTCGCC +
Preference number: 4 (lower is better)
Translates to: PLPWCEAPSGTPAGRVLWVDGGL*LTAILA
Trigger: GGCGAGGATGGCAGTGAGTCAGAGGCCACCGTCAAC...CCACAAAACTCTCCCCGCTGGAGTCCCAGATGGCGCTTCACACCAGGGCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTACTCGGAGGCCGCGCTaGTCTCACCCAGCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAATRRPR*SHPALC
Trigger: GCAAAGGGCTGGGTGAGATCAGCGCGGCCTCCGAGT...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GCCCCACTCTGTGCTGATCTGCGACATGCTGCCAGGCAGCAGGGGAGTCACCCCGCGCTGATCGGAGAATaGGTGACAGTCCCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: APLCADLRHAARQQGSHPALIGE*VTVPAS
Trigger: TGAGGCTGGGACTGTCACTCATTCTCCGATCAGCGC...GGGGTGACTCCCCTGCTGCCTGGCAGCATGTCGCAGATCAGCACAGAGTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp CCACTGCCCTGGTGTGAAGCGCCATCTGGGACTCCAGCGGGGAGAGTTTTGTGGTCCACTGCCCTGGTGTaGAGCGCCATCTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: PLPWCEAPSGTPAGRVLWSTALV*SAIWDS
Trigger: GGAGTCCCAGATGGCGCTTCACACCAGGGCAGTGGA...CCACAAAACTCTCCCCGCTGGAGTCCCAGATGGCGCTTCACACCAGGGCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp CTGCCTCCACTGCCCTGGTGTGAAGCGCCATCTGGGACTCCAGCGGGGAGAGTTCATGCCTGCCTCCACTaGCCTGGTGTGAAGCGCCAT +
Preference number: 4 (lower is better)
Translates to: LPPLPWCEAPSGTPAGRVHACLH*PGVKRH
Trigger: ATGGCGCTTCACACCAGGGCAGTGGAGGCAGGCATG...AACTCTCCCCGCTGGAGTCCCAGATGGCGCTTCACACCAGGGCAGTGGAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp CTGCCTCCACTGCCCTGGTGTGAAGCGCCATCTGGGACTCCAGCGGGGAGAGTTGCACCTGGGCTGTGCTaGAGTATGGCTCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: LPPLPWCEAPSGTPAGRVAPGLC*SMAPPG
Trigger: ACCAGGTGGAGCCATACTCCAGCACAGCCCAGGTGC...AACTCTCCCCGCTGGAGTCCCAGATGGCGCTTCACACCAGGGCAGTGGAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp GTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCAGCCTCCCAAGGTTGCTaGGATGGCTGTGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: VAQQLWPWWSCQVLPKGAASQGC*DGCGLG
Trigger: GCCCAGCCCACAGCCATCCCAGCAACCTTGGGAGGC...TGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp GCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTCATCGCACACCAGGGTaGCGGACTGGCCGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: AAVAMVVLPGSSKGGTDLHRTPG*RTGRGW
Trigger: CCAACCTCGGCCAGTCCGTCACCCTGGTGTGCGATG...AAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTTCAGGCCCACGATGGTaGCGATGCCCTCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAASGPRW*RCPPCW
Trigger: CCAGCATGGAGGGCATCGTCACCATCGTGGGCCTGA...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTCAGGCCCACGATGGTaGCGATGCCCTCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: LLSSCGHGGPARFFQRGHSGPRW*RCPPCW
Trigger: CCAGCATGGAGGGCATCGTCACCATCGTGGGCCTGA...GTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp TCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATACTCGGAGGCCGCGCTaGTCTCACCCAGCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: SAAVAMVVLPGSSKGGTDTRRPR*SHPALC
Trigger: GCAAAGGGCTGGGTGAGATCAGCGCGGCCTCCGAGT...ATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp GCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTACTCGGAGGCCGCGCTaGTCTCACCCAGCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: AAVAMVVLPGSSKGGTDLTRRPR*SHPALC
Trigger: GCAAAGGGCTGGGTGAGATCAGCGCGGCCTCCGAGT...AAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp GGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCCCAGGGACTTCAGCATaGCGTGGTCACTGCCAGACG +
Preference number: 4 (lower is better)
Translates to: GCSAAVAMVVLPGSSKGGPGTSA*RGHCQT
Trigger: CGTCTGGCAGTGACCACGTCATGCTGAAGTCCCTGG...GCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTCCCGGTGCTCAGGCCTaGGGTGGGGCTGCCGTTGGC +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAPGAQA*GGAAVG
Trigger: GCCAACGGCAGCCCCACCTCAGGCCTGAGCACCGGG...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CTGCCTCCACTGCCCTGGTGTGAAGCGCCATCTGGGACTCCAGCGGGGAGAGTTAGGCACTACCCTGCCTaGGCTACTGTGCAGCATGGA +
Preference number: 4 (lower is better)
Translates to: LPPLPWCEAPSGTPAGRVRHYPA*ATVQHG
Trigger: TCCATGCTGCACAGTAGCTCAGGCAGGGTAGTGCCT...AACTCTCCCCGCTGGAGTCCCAGATGGCGCTTCACACCAGGGCAGTGGAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp GGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCCTGAGCAAGGTGGGGTaGACTCACTCCTGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: GCSAAVAMVVLPGSSKGGLSKVG*THSCRV
Trigger: GACCCTGCAGGAGTGAGTGCACCCCACCTTGCTCAG...GCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp CTGCCTCCACTGCCCTGGTGTGAAGCGCCATCTGGGACTCCAGCGGGGAGAGTTGGCCGATGGTGTTGCTaGCGGTGCAGATGTACTCTC +
Preference number: 4 (lower is better)
Translates to: LPPLPWCEAPSGTPAGRVGRWCC*RCRCTL
Trigger: GAGAGTACATCTGCACCGCCAGCAACACCATCGGCC...AACTCTCCCCGCTGGAGTCCCAGATGGCGCTTCACACCAGGGCAGTGGAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp CCACTGCCCTGGTGTGAAGCGCCATCTGGGACTCCAGCGGGGAGAGTTTTGTGGAGTGTCCGTGGGGAGTaGGTATGCGCTAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: PLPWCEAPSGTPAGRVLWSVRGE*VCASAA
Trigger: GGCAGCACTAGCGCATACCCACTCCCCACGGACACT...CCACAAAACTCTCCCCGCTGGAGTCCCAGATGGCGCTTCACACCAGGGCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp GCCCCACTCTGTGCTGATCTGCGACATGCTGCCAGGCAGCAGGGGAGTCACCCCCCTCATCTGTTTTCTTaGTGCCCCGGATCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: APLCADLRHAARQQGSHPPHLFS*CPGSAG
Trigger: ACCTGCAGATCCGGGGCATCAAGAAAACAGATGAGG...GGGGTGACTCCCCTGCTGCCTGGCAGCATGTCGCAGATCAGCACAGAGTGGGGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp GAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGCCAGCCCTTTGCCATTaGGCGCCGCCAGCCTTACGG +
Preference number: 4 (lower is better)
Translates to: EWLLSSCGHGGPARFFQRPALCH*APPALR
Trigger: CCGTAAGGCTGGCGGCGCTCAATGGCAAAGGGCTGG...CCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTTGCCAGACGGGAGCCTaGTCTCTGGTTTCCACTCGG +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAACQTGA*SLVSTR
Trigger: CCGAGTGGAAACCAGAGATCAGGCTCCCGTCTGGCA...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACGCTGGGCCGAGGTCCTaGACACAAAATGAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: LLSSCGHGGPARFFQRGHAGPRS*TQNEPP
Trigger: AGGCGGCTCATTTTGTGTTCAGGACCTCGGCCCAGC...GTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp CAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCGCTGGGCCGAGGTCCTaGACACAAAATGAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: QQLWPWWSCQVLPKGALIAGPRS*TQNEPP
Trigger: AGGCGGCTCATTTTGTGTTCAGGACCTCGGCCCAGC...GATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp TCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATGGCCCCACTCTGTGCTaGTCTGCGACATGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SAAVAMVVLPGSSKGGTDGPTLC*SATCCQ
Trigger: CTGGCAGCATGTCGCAGATCAGCACAGAGTGGGGCC...ATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp CCTGGTGTGAAGCGCCATCTGGGACTCCAGCGGGGAGAGTTTTGTGGCTGGGTTGCAGCATGGAGCCTCTaGTGTCTGCACGTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: PGVKRHLGLQRGEFCGWVAAWSL*CLHVSL
Trigger: GAGGCTCACGTGCAGACATCAGAGGCTCCATGCTGC...AACCCAGCCACAAAACTCTCCCCGCTGGAGTCCCAGATGGCGCTTCACACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp GTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCATGGGCCCTCCTAGGATaGAGCCGTGTGACTTCTGCC +
Preference number: 4 (lower is better)
Translates to: VAQQLWPWWSCQVLPKGAWALLG*SRVTSA
Trigger: GGCAGAAGTCACACGGCTTCATCCTAGGAGGGCCCA...TGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp GGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCTGCAGAATTGTTTCCTaGCAGCGGCAGCCGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GCSAAVAMVVLPGSSKGGCRIVS*QRQPSC
Trigger: GCAGCTCGGCTGCCGCTGGCAGGAAACAATTCTGCA...GCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp CTGCCTCCACTGCCCTGGTGTGAAGCGCCATCTGGGACTCCAGCGGGGAGAGTTTGGTGTTGCTGGCGGTaGAGATGTACTCTCCGGCAT +
Preference number: 4 (lower is better)
Translates to: LPPLPWCEAPSGTPAGRVWCCWR*RCTLRH
Trigger: ATGCCGGAGAGTACATCTGCACCGCCAGCAACACCA...AACTCTCCCCGCTGGAGTCCCAGATGGCGCTTCACACCAGGGCAGTGGAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTCCTCCTCCATGTCCTTaGCCTTGGCCCCGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAPPPCP*PWPRAR
Trigger: CCGGGCCCGGGGCCAAGGGCAAGGACATGGAGGAGG...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCATTGCCTCCCAAGGTTaGTGGGATGGCTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: GCSAAVAMVVLPGSSKGGIASQG*WDGCGL
Trigger: CAGCCCACAGCCATCCCAGCAACCTTGGGAGGCAAT...GCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GGGGCCAGGGCTGTGTGTTCTGGGATCCTCCATTTCCATCCCCAGGAGCTGAGAGCTCATGGTGGGCTCTaGGAAGCCTTCGGCATCGCA +
Preference number: 4 (lower is better)
Translates to: GARAVCSGILHFHPQELRAHGGL*EAFGIA
Trigger: TGCGATGCCGAAGGCTTCCCAGAGCCCACCATGAGC...TCTCAGCTCCTGGGGATGGAAATGGAGGATCCCAGAACACACAGCCCTGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTGCTCATGGTGGGCTCTaGGAAGCCTTCGGCATCGCA +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAAAHGGL*EAFGIA
Trigger: TGCGATGCCGAAGGCTTCCCAGAGCCCACCATGAGC...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GGGGCCAGGGCTGTGTGTTCTGGGATCCTCCATTTCCATCCCCAGGAGCTGAGAATGGACTGGGAGTCCTaGCCGATGGTGTTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: GARAVCSGILHFHPQELRMDWES*PMVLLA
Trigger: CGCCAGCAACACCATCGGCCAGGACTCCCAGTCCAT...TCTCAGCTCCTGGGGATGGAAATGGAGGATCCCAGAACACACAGCCCTGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GGGGCCAGGGCTGTGTGTTCTGGGATCCTCCATTTCCATCCCCAGGAGCTGAGAGCACCTGGGCTGTGCTaGAGTATGGCTCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: GARAVCSGILHFHPQELRAPGLC*SMAPPG
Trigger: ACCAGGTGGAGCCATACTCCAGCACAGCCCAGGTGC...TCTCAGCTCCTGGGGATGGAAATGGAGGATCCCAGAACACACAGCCCTGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GCCCCACTCTGTGCTGATCTGCGACATGCTGCCAGGCAGCAGGGGAGTCACCCCTCATCAAACTGCACCTaGGCTGTGCTGGAGTATGGC +
Preference number: 4 (lower is better)
Translates to: APLCADLRHAARQQGSHPSSNCT*AVLEYG
Trigger: GCCATACTCCAGCACAGCCCAGGTGCAGTTTGATGA...GGGGTGACTCCCCTGCTGCCTGGCAGCATGTCGCAGATCAGCACAGAGTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp GGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCCGGGAGCCTGATCTCTaGTTTCCACTCGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: GCSAAVAMVVLPGSSKGGREPDL*FPLGGE
Trigger: CTCTCCTCCGAGTGGAAACCAGAGATCAGGCTCCCG...GCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGGGGCTGCCGTTGGCTaGGATGGCTGTGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAGAAVG*DGCGLG
Trigger: GCCCAGCCCACAGCCATCCCAGCCAACGGCAGCCCC...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGCTGGGCTGGGCAGTCTaGGAGTGGCCTGTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: NGCSAAVAMVVLPGSSKGLGWAV*EWPVPL
Trigger: GAGAGGGACAGGCCACTCCCAGACTGCCCAGCCCAG...CCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp AGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGACTCCTGGCGGGGCTaGGGCTGCAGCTGTCACCAG +
Preference number: 4 (lower is better)
Translates to: RMVAQQLWPWWSCQVLPKDSWRG*GCSCHQ
Trigger: CTGGTGACAGCTGCAGCCCCAGCCCCGCCAGGAGTC...CTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp CTGCCTCCACTGCCCTGGTGTGAAGCGCCATCTGGGACTCCAGCGGGGAGAGTTATGGTGTGTGGAGCATaGGCAGCACAACTACAGGGC +
Preference number: 4 (lower is better)
Translates to: LPPLPWCEAPSGTPAGRVMVCGA*AAQLQG
Trigger: GCCCTGTAGTTGTGCTGCCCATGCTCCACACACCAT...AACTCTCCCCGCTGGAGTCCCAGATGGCGCTTCACACCAGGGCAGTGGAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp GAGCGCTGGGGATTAATGGCGAGCGCCAACATAGGTGGCTTTGCCCCTCAGACCGGGCCCCATGGTGTGTaGAGCATGGGCAGCACAACT +
Preference number: 4 (lower is better)
Translates to: ERWGLMASANIGGFAPQTGPHGV*SMGSTT
Trigger: AGTTGTGCTGCCCATGCTCCACACACCATGGGGCCC...GGTCTGAGGGGCAAAGCCACCTATGTTGGCGCTCGCCATTAATCCCCAGCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp CAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTGTTGACGGTGGCCTCTaGCTCACTGCCATCCTCGCC +
Preference number: 4 (lower is better)
Translates to: QLWPWWSCQVLPKGALIFVDGGL*LTAILA
Trigger: GGCGAGGATGGCAGTGAGTCAGAGGCCACCGTCAAC...AAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp CTGCCTCCACTGCCCTGGTGTGAAGCGCCATCTGGGACTCCAGCGGGGAGAGTTTTGGTGGGAGGGAGCTaGCCACATCACACACAATCA +
Preference number: 4 (lower is better)
Translates to: LPPLPWCEAPSGTPAGRVLVGGS*PHHTQS
Trigger: TGATTGTGTGTGATGTGGTCAGCTCCCTCCCACCAA...AACTCTCCCCGCTGGAGTCCCAGATGGCGCTTCACACCAGGGCAGTGGAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp CCACTGCCCTGGTGTGAAGCGCCATCTGGGACTCCAGCGGGGAGAGTTTTGTGGGCCATCCCGAAACCATaGGATCGTGGCACTGGGATA +
Preference number: 4 (lower is better)
Translates to: PLPWCEAPSGTPAGRVLWAIPKP*DRGTGI
Trigger: TATCCCAGTGCCACGATCTCATGGTTTCGGGATGGC...CCACAAAACTCTCCCCGCTGGAGTCCCAGATGGCGCTTCACACCAGGGCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp GGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCGCCATCCCGAAACCATaGGATCGTGGCACTGGGATA +
Preference number: 4 (lower is better)
Translates to: GCSAAVAMVVLPGSSKGGAIPKP*DRGTGI
Trigger: TATCCCAGTGCCACGATCTCATGGTTTCGGGATGGC...GCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp GGGGCCAGGGCTGTGTGTTCTGGGATCCTCCATTTCCATCCCCAGGAGCTGAGACTGGTCGATGGATGGTaGAGAGGGGGTGTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: GARAVCSGILHFHPQELRLVDGW*RGGVCL
Trigger: CAAGCAGACACCCCCTCTTCACCATCCATCGACCAG...TCTCAGCTCCTGGGGATGGAAATGGAGGATCCCAGAACACACAGCCCTGGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TCTCCCATCTGCCCTTCGAGCTTAGGTGCACTGGGTTCCCCTTCTGCTTTCTGCTCAGGCCCACGATGGTaGCGATGCCCTCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: SPICPSSLGALGSPSAFCSGPRW*RCPPCW
Trigger: CCAGCATGGAGGGCATCGTCACCATCGTGGGCCTGA...GCAGAAAGCAGAAGGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR TCA 90 bp ACCTTCTCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGCCCTTTGCCATTaGGCGCCGCCAGCCTTACGG +
Preference number: 4 (lower is better)
Translates to: TFSSTQNGCSAAVAMVVLPALCH*APPALR
Trigger: CCGTAAGGCTGGCGGCGCTCAATGGCAAAGGGCTGG...CAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGAGAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp TCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATTGCCAGACGGGAGCCTaGTCTCTGGTTTCCACTCGG +
Preference number: 4 (lower is better)
Translates to: SAAVAMVVLPGSSKGGTDCQTGA*SLVSTR
Trigger: CCGAGTGGAAACCAGAGATCAGGCTCCCGTCTGGCA...ATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp GTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCAGCGCTGATCGGAGAATaGGTGACAGTCCCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: VAQQLWPWWSCQVLPKGAALIGE*VTVPAS
Trigger: TGAGGCTGGGACTGTCACTCATTCTCCGATCAGCGC...TGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp CCTGGTGTGAAGCGCCATCTGGGACTCCAGCGGGGAGAGTTTTGTGGCTGGGTTGTTTTGTGGCTGGGTTaGGAGGCACTACCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: PGVKRHLGLQRGEFCGWVVLWLG*EALPCL
Trigger: CAGGCAGGGTAGTGCCTCTCAACCCAGCCACAAAAC...AACCCAGCCACAAAACTCTCCCCGCTGGAGTCCCAGATGGCGCTTCACACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp TCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCCACTGCCCTGGTGTaGAGCGCCATCTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: SSTQNGCSAAVAMVVLPGSTALV*SAIWDS
Trigger: GGAGTCCCAGATGGCGCTTCACACCAGGGCAGTGGA...ACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTACTGCACCTGGGCTGTaGTGGAGTATGGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAATAPGL*WSMAPP
Trigger: AGGTGGAGCCATACTCCAGCACAGCCCAGGTGCAGT...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CTGCCTCCACTGCCCTGGTGTGAAGCGCCATCTGGGACTCCAGCGGGGAGAGTTTCTGGTTCATCAAACTaGACCTGGGCTGTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LPPLPWCEAPSGTPAGRVSGSSN*TWAVLE
Trigger: CTCCAGCACAGCCCAGGTGCAGTTTGATGAACCAGA...AACTCTCCCCGCTGGAGTCCCAGATGGCGCTTCACACCAGGGCAGTGGAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp CCACTGCCCTGGTGTGAAGCGCCATCTGGGACTCCAGCGGGGAGAGTTTTGTGGCCATCCTCTCCCATCTaGCCTTCGAGCTTAGGTGCA +
Preference number: 4 (lower is better)
Translates to: PLPWCEAPSGTPAGRVLWPSSPI*PSSLGA
Trigger: TGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGG...CCACAAAACTCTCCCCGCTGGAGTCCCAGATGGCGCTTCACACCAGGGCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTGGCCTGAGGTGGGGCTaGCGTTGGCTGGGATGGCTG +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAGLRWG*RWLGWL
Trigger: CAGCCATCCCAGCCAACGGCAGCCCCACCTCAGGCC...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTACCCAGAGGCAGCCTTaGCACCCTAACCTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAATQRQP*HPNLLL
Trigger: CAGCAAGAGGTTAGGGTGGCAAGGCTGCCTCTGGGT...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTGAGCCTGCCCCTCACTaGTGGGCCCTCCCGGTCTCA +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAEPAPH*WALPVS
Trigger: TGAGACCGGGAGGGCCCAGCAGTGAGGGGCAGGCTC...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGAGCCTGCCCCTCACTaGTGGGCCCTCCCGGTCTCA +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAEPAPH*WALPVS
Trigger: TGAGACCGGGAGGGCCCAGCAGTGAGGGGCAGGCTC...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GGGGCCAGGGCTGTGTGTTCTGGGATCCTCCATTTCCATCCCCAGGAGCTGAGAAGGGTCCAGTGGCCCTaGTCGTCACACTTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: GARAVCSGILHFHPQELRRVQWP*SSHLSA
Trigger: AGCACTCAAGTGTGACGAGCAGGGCCACTGGACCCT...TCTCAGCTCCTGGGGATGGAAATGGAGGATCCCAGAACACACAGCCCTGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTCAACTCGGAGATCCTTaGGCTGGCCCGGGTTCGTTT +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAAQLGDP*AGPGSF
Trigger: AAACGAACCCGGGCCAGCGCAAGGATCTCCGAGTTG...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GGGAGTGGGTATGCGCTAGTGCTGCCTCCTGAGGAGCGCACTGTTACAAGCCGTCAACTCGGAGATCCTTaGGCTGGCCCGGGTTCGTTT +
Preference number: 4 (lower is better)
Translates to: GSGYALVLPPEERTVTSRQLGDP*AGPGSF
Trigger: AAACGAACCCGGGCCAGCGCAAGGATCTCCGAGTTG...ACGGCTTGTAACAGTGCGCTCCTCAGGAGGCAGCACTAGCGCATACCCACTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621518.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTCCCCTGCAGCGAGTGTaGACGGCGGCTGAGCGACAG +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAPLQRV*TAAERQ
Trigger: CTGTCGCTCAGCCGCCGTCCACACTCGCTGCAGGGG...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTCCCCTGCAGCGAGTGTaGACGGCGGCTGAGCGACAG +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAPLQRV*TAAERQ
Trigger: CTGTCGCTCAGCCGCCGTCCACACTCGCTGCAGGGG...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGAGTCCTGGCCGATaGTGTTGCTGGCGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: EWLLSSCGHGGPARFFQRGSPGR*CCWRCR
Trigger: TCTGCACCGCCAGCAACACCATCGGCCAGGACTCCC...CCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCGGGAGTCCTGGCCGATaGTGTTGCTGGCGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: FHTEWLLSSCGHGGPARFGSPGR*CCWRCR
Trigger: TCTGCACCGCCAGCAACACCATCGGCCAGGACTCCC...GAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATATGGACTGGGAGTCCTaGCCGATGGTGTTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: SAAVAMVVLPGSSKGGTDMDWES*PMVLLA
Trigger: CGCCAGCAACACCATCGGCCAGGACTCCCAGTCCAT...ATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTGCTGTAATTGGAGCTTaGCAGCAGCTGGCCATCCCG +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAAAVIGA*QQLAIP
Trigger: CGGGATGGCCAGCTGCTGCCAAGCTCCAATTACAGC...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTGCTCCACCTGGTCGATaGATGGTGAAGAGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAAAPPGR*MVKRGC
Trigger: ACACCCCCTCTTCACCATCCATCGACCAGGTGGAGC...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACGCTCCACCTGGTCGATaGATGGTGAAGAGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: LLSSCGHGGPARFFQRGHAPPGR*MVKRGC
Trigger: ACACCCCCTCTTCACCATCCATCGACCAGGTGGAGC...GTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCAGCTCCACCTGGTCGATaGATGGTGAAGAGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: VAQQLWPWWSCQVLPKGAAPPGR*MVKRGC
Trigger: ACACCCCCTCTTCACCATCCATCGACCAGGTGGAGC...TGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GGGGCCAGGGCTGTGTGTTCTGGGATCCTCCATTTCCATCCCCAGGAGCTGAGAGGGTTCCCCTTGGACTaGCTGCGTCTTGAACTCGGA +
Preference number: 4 (lower is better)
Translates to: GARAVCSGILHFHPQELRGFPLD*LRLELG
Trigger: TCCGAGTTCAAGACGCAGCCAGTCCAAGGGGAACCC...TCTCAGCTCCTGGGGATGGAAATGGAGGATCCCAGAACACACAGCCCTGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316851.12
CDS-3UTR CCA 90 bp GGGAGTGGGTATGCGCTAGTGCTGCCTCCTGAGGAGCGCACTGTTACAAGCCGTGCACTGGGTTCCCCTTaGACTGGCTGCGTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: GSGYALVLPPEERTVTSRALGSP*TGCVLN
Trigger: GTTCAAGACGCAGCCAGTCCAAGGGGAACCCAGTGC...ACGGCTTGTAACAGTGCGCTCCTCAGGAGGCAGCACTAGCGCATACCCACTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621128.4
CDS-3UTR CCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTCGGGAGCCTGATCTCTaGTTTCCACTCGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAAREPDL*FPLGGE
Trigger: CTCTCCTCCGAGTGGAAACCAGAGATCAGGCTCCCG...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCGACTTCAGCATGACGTaGTCACTGCCAGACGGGAGC +
Preference number: 4 (lower is better)
Translates to: QQLWPWWSCQVLPKGALIDFSMT*SLPDGS
Trigger: GCTCCCGTCTGGCAGTGACCACGTCATGCTGAAGTC...GATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GGGGCCAGGGCTGTGTGTTCTGGGATCCTCCATTTCCATCCCCAGGAGCTGAGAGACTTCAGCATGACGTaGTCACTGCCAGACGGGAGC +
Preference number: 4 (lower is better)
Translates to: GARAVCSGILHFHPQELRDFSMT*SLPDGS
Trigger: GCTCCCGTCTGGCAGTGACCACGTCATGCTGAAGTC...TCTCAGCTCCTGGGGATGGAAATGGAGGATCCCAGAACACACAGCCCTGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CTCTCCCATCTGCCCTTCGAGCTTAGGTGCACTGGGTTCCCCTTCTGCTTTCTGGGGATGGCTGTGGGCTaGGCCGAGGTCCTGAACACA +
Preference number: 4 (lower is better)
Translates to: LSHLPFELRCTGFPFCFLGMAVG*AEVLNT
Trigger: TGTGTTCAGGACCTCGGCCCAGCCCACAGCCATCCC...CAGAAAGCAGAAGGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTTGCCGTTGGCTGGGATaGCTGTGGGCTGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAACRWLG*LWAGPR
Trigger: CCTCGGCCCAGCCCACAGCCATCCCAGCCAACGGCA...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTTGTCTCCTGGCACTCTaGCTTTGCTTCTACGGGGCC +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAACLLAL*LCFYGA
Trigger: GGCCCCGTAGAAGCAAAGCCAGAGTGCCAGGAGACA...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTGGACTGGTGCAGGGGTaGGCTTGCTGGCCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAGLVQG*ACWPEE
Trigger: CTCCTCCGGCCAGCAAGCCCACCCCTGCACCAGTCC...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR CCA 90 bp TTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACGGTGGAGGAGGGCTATaGACTGGCTGCGTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: LLSSCGHGGPARFFQRGHGGGGL*TGCVLN
Trigger: GTTCAAGACGCAGCCAGTCCATAGCCCTCCTCCACC...GTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp CAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCCAGCTGTGGCCATGGTaGTCCTGCCAGGTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: QQLWPWWSCQVLPKGALIQLWPW*SCQVLP
Trigger: TGGAAGAACCTGGCAGGACCACCATGGCCACAGCTG...GATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp CCTGGTGTGAAGCGCCATCTGGGACTCCAGCGGGGAGAGTTTTGTGGCTGGGTTGAGCGCCAACATAGGTaGCTTTGCCCCTCAGACCAC +
Preference number: 4 (lower is better)
Translates to: PGVKRHLGLQRGEFCGWVERQHR*LCPSDH
Trigger: GTGGTCTGAGGGGCAAAGCCACCTATGTTGGCGCTC...AACCCAGCCACAAAACTCTCCCCGCTGGAGTCCCAGATGGCGCTTCACACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp CAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTCTGCCTCCACTGCCCTaGTGTGAAGCGCCATCTGGG +
Preference number: 4 (lower is better)
Translates to: QLWPWWSCQVLPKGALIFLPPLP*CEAPSG
Trigger: CCCAGATGGCGCTTCACACCAGGGCAGTGGAGGCAG...AAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR CAA 72 bp ATCTGGGACTCCAGCGGGGAGAGTTTTGTGGCTGGGTaGAGAGGCACTACCCTGCCTGAGCTACTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: IWDSSGESFVAG*RGTTLPELLCS
Trigger: GCTGCACAGTAGCTCAGGCAGGGTAGTGCCTCTCAACCCAGCCACAAAACTCTCCCCGCTGGAGTCCCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTAGTGTGGACGGCGGCTaGGCGACAGACCTAGGGGCA +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAASVDGG*ATDLGA
Trigger: TGCCCCTAGGTCTGTCGCTCAGCCGCCGTCCACACT...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp AGCTCTCCCACACTGACCTGGGATCCTTATGCTCTGCCCTGTGCCCAAAAACCAGTTGACGGTGGCCTCTaGCTCACTGCCATCCTCGCC +
Preference number: 4 (lower is better)
Translates to: SSPTLTWDPYALPCAQKPVDGGL*LTAILA
Trigger: GGCGAGGATGGCAGTGAGTCAGAGGCCACCGTCAAC...TGGTTTTTGGGCACAGGGCAGAGCATAAGGATCCCAGGTCAGTGTGGGAGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTCATCGCACACCAGGGTaGCGGACTGGCCGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAHRTPG*RTGRGW
Trigger: CCAACCTCGGCCAGTCCGTCACCCTGGTGTGCGATG...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTCTGGTCGATGGATGGTaGAGAGGGGGTGTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: AAVAMVVLPGSSKGGTDLLVDGW*RGGVCL
Trigger: CAAGCAGACACCCCCTCTTCACCATCCATCGACCAG...AAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTCCAGCCCTTTGCCATTaGGCGCCGCCAGCCTTACGG +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAPALCH*APPALR
Trigger: CCGTAAGGCTGGCGGCGCTCAATGGCAAAGGGCTGG...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTACTCGGAGGCCGCGCTaGTCTCACCCAGCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAATRRPR*SHPALC
Trigger: GCAAAGGGCTGGGTGAGATCAGCGCGGCCTCCGAGT...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTGCCAGACGGGAGCCTaGTCTCTGGTTTCCACTCGG +
Preference number: 4 (lower is better)
Translates to: FHTEWLLSSCGHGGPARFCQTGA*SLVSTR
Trigger: CCGAGTGGAAACCAGAGATCAGGCTCCCGTCTGGCA...GAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp CAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTGCCAGACGGGAGCCTaGTCTCTGGTTTCCACTCGG +
Preference number: 4 (lower is better)
Translates to: QLWPWWSCQVLPKGALIFCQTGA*SLVSTR
Trigger: CCGAGTGGAAACCAGAGATCAGGCTCCCGTCTGGCA...AAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp TCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTCCAGGGACTTCAGCATaGCGTGGTCACTGCCAGACG +
Preference number: 4 (lower is better)
Translates to: STQNGCSAAVAMVVLPGSPGTSA*RGHCQT
Trigger: CGTCTGGCAGTGACCACGTCATGCTGAAGTCCCTGG...AGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp TCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTGCTGGGCCGAGGTCCTaGACACAAAATGAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: SSTQNGCSAAVAMVVLPGAGPRS*TQNEPP
Trigger: AGGCGGCTCATTTTGTGTTCAGGACCTCGGCCCAGC...ACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp AATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGCATTCAGGAAGCACTaGCAGGTTGGCTCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: NGCSAAVAMVVLPGSSKGAFRKH*QVGSAP
Trigger: TGGGGCCGAGCCAACCTGTCAGTGCTTCCTGAATGC...CCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp GGGAGTGGGTATGCGCTAGTGCTGCCTCCTGAGGAGCGCACTGTTACAAGCCGTTGGGATGTGTTGAGATaGCAGGGCCACGTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: GSGYALVLPPEERTVTSRWDVLR*QGHVSP
Trigger: AGGACTGACGTGGCCCTGTCATCTCAACACATCCCA...ACGGCTTGTAACAGTGCGCTCCTCAGGAGGCAGCACTAGCGCATACCCACTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp TCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATGCTAGTGCTGCCTCCTaGGGAGCGCACTGTTACAAG +
Preference number: 4 (lower is better)
Translates to: SAAVAMVVLPGSSKGGTDASAAS*GAHCYK
Trigger: CTTGTAACAGTGCGCTCCTCAGGAGGCAGCACTAGC...ATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp AGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGCTCCTGCAGGGTCTCTaGGGGCTGCTGTCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RMVAQQLWPWWSCQVLPKLLQGL*GLLSPG
Trigger: TCCTGGAGACAGCAGCCCTCAGAGACCCTGCAGGAG...CTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp GGGGCCAGGGCTGTGTGTTCTGGGATCCTCCATTTCCATCCCCAGGAGCTGAGACTACGCACCACCATGTaGCCATCCAGAGTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: GARAVCSGILHFHPQELRLRTTM*PSRVSC
Trigger: GCAAGAGACTCTGGATGGGCACATGGTGGTGCGTAG...TCTCAGCTCCTGGGGATGGAAATGGAGGATCCCAGAACACACAGCCCTGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316851.12
ENST00000615112.4
CDS-3UTR GCA 90 bp GAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGTCCCCTTGGACTGGCTaGGTCTTGAACTCGGAGGCC +
Preference number: 4 (lower is better)
Translates to: EWLLSSCGHGGPARFFQRSPWTG*VLNSEA
Trigger: GGCCTCCGAGTTCAAGACGCAGCCAGTCCAAGGGGA...CCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621128.4
CDS-3UTR GCA 90 bp CTCTCCCATCTGCCCTTCGAGCTTAGGTGCACTGGGTTCCCCTTCTGCTTTCTGGGGCTATGGACTGGCTaGGTCTTGAACTCGGAGGCC +
Preference number: 4 (lower is better)
Translates to: LSHLPFELRCTGFPFCFLGLWTG*VLNSEA
Trigger: GGCCTCCGAGTTCAAGACGCAGCCAGTCCATAGCCC...CAGAAAGCAGAAGGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR GCA 90 bp TCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTGGGCTATGGACTGGCTaGGTCTTGAACTCGGAGGCC +
Preference number: 4 (lower is better)
Translates to: SSTQNGCSAAVAMVVLPGGLWTG*VLNSEA
Trigger: GGCCTCCGAGTTCAAGACGCAGCCAGTCCATAGCCC...ACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp GCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTGGCCATGGTGGTCCTaGCAGGTTCTTCCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: AAVAMVVLPGSSKGGTDLWPWWS*QVLPKG
Trigger: CCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCA...AAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp GGGAGTGGGTATGCGCTAGTGCTGCCTCCTGAGGAGCGCACTGTTACAAGCCGTCAGAAAGATGGACACTaGCCCTCTCCTGTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: GSGYALVLPPEERTVTSRQKDGH*PSPVGG
Trigger: ACCACCCACAGGAGAGGGGCAGTGTCCATCTTTCTG...ACGGCTTGTAACAGTGCGCTCCTCAGGAGGCAGCACTAGCGCATACCCACTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp AGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGTGCACTCACTCCTaGAGGGTCTCTGAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RMVAQQLWPWWSCQVLPKGCTHS*RVSEGC
Trigger: GCAGCCCTCAGAGACCCTGCAGGAGTGAGTGCACCC...CTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTCCCCTGCAGCGAGTGTaGACGGCGGCTGAGCGACAG +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWAPLQRV*TAAERQ
Trigger: CTGTCGCTCAGCCGCCGTCCACACTCGCTGCAGGGG...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GGGGCCAGGGCTGTGTGTTCTGGGATCCTCCATTTCCATCCCCAGGAGCTGAGAACGCTGATCTCCCCCTaGCTGGGAACAATATCCACC +
Preference number: 4 (lower is better)
Translates to: GARAVCSGILHFHPQELRTLISP*LGTIST
Trigger: GGTGGATATTGTTCCCAGCCAGGGGGAGATCAGCGT...TCTCAGCTCCTGGGGATGGAAATGGAGGATCCCAGAACACACAGCCCTGGCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCACGCTGATCTCCCCCTaGCTGGGAACAATATCCACC +
Preference number: 4 (lower is better)
Translates to: QQLWPWWSCQVLPKGALITLISP*LGTIST
Trigger: GGTGGATATTGTTCCCAGCCAGGGGGAGATCAGCGT...GATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTCTCCCGGAACTCCTGTaGGGTTGGCGCATTCTTGAA +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAALPELL*GWRILE
Trigger: TTCAAGAATGCGCCAACCCCACAGGAGTTCCGGGAG...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GGGAGTGGGTATGCGCTAGTGCTGCCTCCTGAGGAGCGCACTGTTACAAGCCGTGGCCGAGGTTGGCGGTaGCATTCACAATATTCTGCC +
Preference number: 4 (lower is better)
Translates to: GSGYALVLPPEERTVTSRGRGWR*HSQYSA
Trigger: GGCAGAATATTGTGAATGCCACCGCCAACCTCGGCC...ACGGCTTGTAACAGTGCGCTCCTCAGGAGGCAGCACTAGCGCATACCCACTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp CCTGGTGTGAAGCGCCATCTGGGACTCCAGCGGGGAGAGTTTTGTGGCTGGGTTCGGACTGGCCGAGGTTaGCGGTGGCATTCACAATAT +
Preference number: 4 (lower is better)
Translates to: PGVKRHLGLQRGEFCGWVRTGRG*RWHSQY
Trigger: ATATTGTGAATGCCACCGCCAACCTCGGCCAGTCCG...AACCCAGCCACAAAACTCTCCCCGCTGGAGTCCCAGATGGCGCTTCACACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp GAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGCTCATGGTGGGCTCTaGGAAGCCTTCGGCATCGCA +
Preference number: 4 (lower is better)
Translates to: EWLLSSCGHGGPARFFQRAHGGL*EAFGIA
Trigger: TGCGATGCCGAAGGCTTCCCAGAGCCCACCATGAGC...CCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp AGACTGATGCTCAAAGCCATTCTGTGGGTCACTGCTGAACCACGGCCCCACTCTGGGAGTCCTGGCCGATaGTGTTGCTGGCGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: RLMLKAILWVTAEPRPHSGSPGR*CCWRCR
Trigger: TCTGCACCGCCAGCAACACCATCGGCCAGGACTCCC...AGAGTGGGGCCGTGGTTCAGCAGTGACCCACAGAATGGCTTTGAGCATCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp TTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCATGGACTGGGAGTCCTaGCCGATGGTGTTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: FHTEWLLSSCGHGGPARFMDWES*PMVLLA
Trigger: CGCCAGCAACACCATCGGCCAGGACTCCCAGTCCAT...GAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCGCACCTGGGCTGTGCTaGAGTATGGCTCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: FHTEWLLSSCGHGGPARFAPGLC*SMAPPG
Trigger: ACCAGGTGGAGCCATACTCCAGCACAGCCCAGGTGC...GAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp CAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTGGGCACCCCACCTGTaGCCTCTGGTTCATCAAACT +
Preference number: 4 (lower is better)
Translates to: QQLWPWWSCQVLPKGALIWAPHL*PLVHQT
Trigger: AGTTTGATGAACCAGAGGCCACAGGTGGGGTGCCCA...GATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GGGGCCAGGGCTGTGTGTTCTGGGATCCTCCATTTCCATCCCCAGGAGCTGAGACGATGCCCTCCATGCTaGCTTCCTTGGCATCATACC +
Preference number: 4 (lower is better)
Translates to: GARAVCSGILHFHPQELRRCPPC*LPWHHT
Trigger: GGTATGATGCCAAGGAAGCCAGCATGGAGGGCATCG...TCTCAGCTCCTGGGGATGGAAATGGAGGATCCCAGAACACACAGCCCTGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGATGGCTGTGGGCTaGGCCGAGGTCCTGAACACA +
Preference number: 4 (lower is better)
Translates to: RMVAQQLWPWWSCQVLPKGMAVG*AEVLNT
Trigger: TGTGTTCAGGACCTCGGCCCAGCCCACAGCCATCCC...CTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTTGCTCAGGCCTGAGGTaGGGCTGCCGTTGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEACSGLR*GCRWLG
Trigger: TCCCAGCCAACGGCAGCCCCACCTCAGGCCTGAGCA...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTCTCGGGCTCCGTCAGTaGCGTGGTCTCGTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEALGLRQ*RGLVGL
Trigger: GAGCCCAACGAGACCACGCCACTGACGGAGCCCGAG...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATGGTGGAGGAGGGCTATaGACTGGCTGCGTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: SAAVAMVVLPGSSKGGTDGGGGL*TGCVLN
Trigger: GTTCAAGACGCAGCCAGTCCATAGCCCTCCTCCACC...ATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCAGCAGCTGTGGCCATaGTGGTCCTGCCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: SAAVAMVVLPGSSKGGTDQQLWP*WSCQVL
Trigger: AAGAACCTGGCAGGACCACCATGGCCACAGCTGCTG...ATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCGTTGCTCAGCAGCTGTaGCCATGGTGGTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: FHTEWLLSSCGHGGPARFVAQQL*PWWSCQ
Trigger: CTGGCAGGACCACCATGGCCACAGCTGCTGAGCAAC...GAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp AGTTTTGTGGCTGGGTTGAGAGGCACTACCCTGCCTGAGCTACTGTGCAGCATGCTGCCTCCACTGCCCTaGTGTGAAGCGCCATCTGGG +
Preference number: 4 (lower is better)
Translates to: SFVAGLRGTTLPELLCSMLPPLP*CEAPSG
Trigger: CCCAGATGGCGCTTCACACCAGGGCAGTGGAGGCAG...CATGCTGCACAGTAGCTCAGGCAGGGTAGTGCCTCTCAACCCAGCCACAAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTGACTCCTGGCGGGGCTaGGGCTGCAGCTGTCACCAG +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWADSWRG*GCSCHQ
Trigger: CTGGTGACAGCTGCAGCCCCAGCCCCGCCAGGAGTC...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp TGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGTGTCTCCAGGACTCCTaGCGGGGCTGGGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: WSCQVLPKGALIFFIGTGCLQDS*RGWGCS
Trigger: GCTGCAGCCCCAGCCCCGCCAGGAGTCCTGGAGACA...CCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp GGCTGGGGCATTCAGGAAGCACTGACAGGTTGGCTCGGCCCCAATTTATTAACCCAGGGCACAGGGGAGTaGGGTGTGGCTGAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: GWGIQEALTGWLGPNLLTQGTGE*GVAEQG
Trigger: ACCTTGCTCAGCCACACCCCACTCCCCTGTGCCCTG...GGTTAATAAATTGGGGCCGAGCCAACCTGTCAGTGCTTCCTGAATGCCCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp TCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTGGGCCCCATGGTGTGTaGAGCATGGGCAGCACAACT +
Preference number: 4 (lower is better)
Translates to: STQNGCSAAVAMVVLPGSGPHGV*SMGSTT
Trigger: AGTTGTGCTGCCCATGCTCCACACACCATGGGGCCC...AGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTAGTGTGGACGGCGGCTaGGCGACAGACCTAGGGGCA +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWASVDGG*ATDLGA
Trigger: TGCCCCTAGGTCTGTCGCTCAGCCGCCGTCCACACT...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTATCATTCCACACCACTaGGATCCGCTGCTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAAIIPHH*DPLLVW
Trigger: CCAAACCAGCAGCGGATCTCAGTGGTGTGGAATGAT...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTGTTGACGGTGGCCTCTaGCTCACTGCCATCCTCGCC +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAVDGGL*LTAILA
Trigger: GGCGAGGATGGCAGTGAGTCAGAGGCCACCGTCAAC...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GGGGCCAGGGCTGTGTGTTCTGGGATCCTCCATTTCCATCCCCAGGAGCTGAGAGAAAGATCTTCACGTTaGCGGTGGCCTCTGACTCAC +
Preference number: 4 (lower is better)
Translates to: GARAVCSGILHFHPQELRERSSR*RWPLTH
Trigger: GTGAGTCAGAGGCCACCGTCAACGTGAAGATCTTTC...TCTCAGCTCCTGGGGATGGAAATGGAGGATCCCAGAACACACAGCCCTGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCATTGGTGGGAGGGAGCTaGCCACATCACACACAATCA +
Preference number: 4 (lower is better)
Translates to: VAQQLWPWWSCQVLPKGALVGGS*PHHTQS
Trigger: TGATTGTGTGTGATGTGGTCAGCTCCCTCCCACCAA...TGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTCATCGCACACCAGGGTaGCGGACTGGCCGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWAHRTPG*RTGRGW
Trigger: CCAACCTCGGCCAGTCCGTCACCCTGGTGTGCGATG...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp AAAACCTTCTCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCATCGCACACCAGGGTaGCGGACTGGCCGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: KTFSSTQNGCSAAVAMVVHRTPG*RTGRGW
Trigger: CCAACCTCGGCCAGTCCGTCACCCTGGTGTGCGATG...GACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGAGAAGGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp TCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTCTGGTCGATGGATGGTaGAGAGGGGGTGTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: STQNGCSAAVAMVVLPGSLVDGW*RGGVCL
Trigger: CAAGCAGACACCCCCTCTTCACCATCCATCGACCAG...AGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp CTTCAGCATGACGTGGTCACTGCCAGACGGGAGCCTGATCTCTGGTTTCCACTCCTGGTCGATGGATGGTaGAGAGGGGGTGTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LQHDVVTARREPDLWFPLLVDGW*RGGVCL
Trigger: CAAGCAGACACCCCCTCTTCACCATCCATCGACCAG...GAGTGGAAACCAGAGATCAGGCTCCCGTCTGGCAGTGACCACGTCATGCTGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR TCA 90 bp GAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGCTGGTCGATGGATGGTaGAGAGGGGGTGTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: EWLLSSCGHGGPARFFQRLVDGW*RGGVCL
Trigger: CAAGCAGACACCCCCTCTTCACCATCCATCGACCAG...CCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTTCAGGCCCACGATGGTaGCGATGCCCTCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAASGPRW*RCPPCW
Trigger: CCAGCATGGAGGGCATCGTCACCATCGTGGGCCTGA...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GGGCATTCAGGAAGCACTGACAGGTTGGCTCGGCCCCAATTTATTAACCCTCCTTCAGGCCCACGATGGTaGCGATGCCCTCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: GHSGSTDRLARPQFINPPSGPRW*RCPPCW
Trigger: CCAGCATGGAGGGCATCGTCACCATCGTGGGCCTGA...AGGAGGGTTAATAAATTGGGGCCGAGCCAACCTGTCAGTGCTTCCTGAATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp GTCCTCTCCACACTTAGGACGAGATCTCCAAAGGGTCCCTTCAGAAAGATGGACCCAGCCCTTTGCCATTaGGCGCCGCCAGCCTTACGG +
Preference number: 4 (lower is better)
Translates to: VLSTLRTRSPKGPFRKMDPALCH*APPALR
Trigger: CCGTAAGGCTGGCGGCGCTCAATGGCAAAGGGCTGG...GTCCATCTTTCTGAAGGGACCCTTTGGAGATCTCGTCCTAAGTGTGGAGAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTACTCGGAGGCCGCGCTaGTCTCACCCAGCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWATRRPR*SHPALC
Trigger: GCAAAGGGCTGGGTGAGATCAGCGCGGCCTCCGAGT...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp AGCTCTCCCACACTGACCTGGGATCCTTATGCTCTGCCCTGTGCCCAAAAACCAGCTGGGCCGAGGTCCTaGACACAAAATGAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: SSPTLTWDPYALPCAQKPAGPRS*TQNEPP
Trigger: AGGCGGCTCATTTTGTGTTCAGGACCTCGGCCCAGC...TGGTTTTTGGGCACAGGGCAGAGCATAAGGATCCCAGGTCAGTGTGGGAGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTTCAGGAAGTAGCAGGTaGTGTCCACAACCACCAGGA +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAASGSSR*CPQPPG
Trigger: TCCTGGTGGTTGTGGACATCACCTGCTACTTCCTGA...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTCATTGGGGACCGTCTTaGCTTCGGCTGGCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAHWGPS*LRLALA
Trigger: AGCCAGCGCCAGCCGAAGTCAAGACGGTCCCCAATG...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTCATTGGGGACCGTCTTaGCTTCGGCTGGCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAHWGPS*LRLALA
Trigger: AGCCAGCGCCAGCCGAAGTCAAGACGGTCCCCAATG...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GCCCCACTCTGTGCTGATCTGCGACATGCTGCCAGGCAGCAGGGGAGTCACCCCTGCAGAGAAAAGCAATaGGACAAAGGTGTAGGATGC +
Preference number: 4 (lower is better)
Translates to: APLCADLRHAARQQGSHPCREKQ*DKGVGC
Trigger: GCATCCTACACCTTTGTCTCATTGCTTTTCTCTGCA...GGGGTGACTCCCCTGCTGCCTGGCAGCATGTCGCAGATCAGCACAGAGTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp TCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCATGGGCAACAGGGGTaGCTTCAGTTGCCCATCATG +
Preference number: 4 (lower is better)
Translates to: SAAVAMVVLPGSSKGGTDHGQQG*LQLPIM
Trigger: CATGATGGGCAACTGAAGTCACCCCTGTTGCCCATG...ATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp AGCTCTCCCACACTGACCTGGGATCCTTATGCTCTGCCCTGTGCCCAAAAACCATCTGTGGGTCACTGCTaGACCACGGCCCCACTCTGT +
Preference number: 4 (lower is better)
Translates to: SSPTLTWDPYALPCAQKPSVGHC*TTAPLC
Trigger: ACAGAGTGGGGCCGTGGTTCAGCAGTGACCCACAGA...TGGTTTTTGGGCACAGGGCAGAGCATAAGGATCCCAGGTCAGTGTGGGAGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp AGACTGATGCTCAAAGCCATTCTGTGGGTCACTGCTGAACCACGGCCCCACTCTTCTGTGGGTCACTGCTaGACCACGGCCCCACTCTGT +
Preference number: 4 (lower is better)
Translates to: RLMLKAILWVTAEPRPHSSVGHC*TTAPLC
Trigger: ACAGAGTGGGGCCGTGGTTCAGCAGTGACCCACAGA...AGAGTGGGGCCGTGGTTCAGCAGTGACCCACAGAATGGCTTTGAGCATCAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp GCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTCCTCTCCTTCTCTACTaGGCACACACAGGCCAGGTA +
Preference number: 4 (lower is better)
Translates to: AAVAMVVLPGSSKGGTDLPLLLY*AHTGQV
Trigger: TACCTGGCCTGTGTGTGCTCAGTAGAGAAGGAGAGG...AAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp AGCTCTCCCACACTGACCTGGGATCCTTATGCTCTGCCCTGTGCCCAAAAACCAGCAGCATGGAGCCTCTaGTGTCTGCACGTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: SSPTLTWDPYALPCAQKPAAWSL*CLHVSL
Trigger: GAGGCTCACGTGCAGACATCAGAGGCTCCATGCTGC...TGGTTTTTGGGCACAGGGCAGAGCATAAGGATCCCAGGTCAGTGTGGGAGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp TCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTGTTTTGTGGCTGGGTTaGGAGGCACTACCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SSTQNGCSAAVAMVVLPGVLWLG*EALPCL
Trigger: CAGGCAGGGTAGTGCCTCTCAACCCAGCCACAAAAC...ACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp GGCTGGGGCATTCAGGAAGCACTGACAGGTTGGCTCGGCCCCAATTTATTAACCTGGGCCCTCCTAGGATaGAGCCGTGTGACTTCTGCC +
Preference number: 4 (lower is better)
Translates to: GWGIQEALTGWLGPNLLTWALLG*SRVTSA
Trigger: GGCAGAAGTCACACGGCTTCATCCTAGGAGGGCCCA...GGTTAATAAATTGGGGCCGAGCCAACCTGTCAGTGCTTCCTGAATGCCCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTCAGCGGCAGCCGAGCTaGGTTCACGCGCTGATCGGA +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWAQRQPS*VHALIG
Trigger: TCCGATCAGCGCGTGAACGCAGCTCGGCTGCCGCTG...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp GCCCCACTCTGTGCTGATCTGCGACATGCTGCCAGGCAGCAGGGGAGTCACCCCCACCTGCAGAGAAACTaGAGTTCCCAGGAAAAACAA +
Preference number: 4 (lower is better)
Translates to: APLCADLRHAARQQGSHPHLQRN*SSQEKQ
Trigger: TTGTTTTTCCTGGGAACTGCAGTTTCTCTGCAGGTG...GGGGTGACTCCCCTGCTGCCTGGCAGCATGTCGCAGATCAGCACAGAGTGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp CAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCACCACTGAGATCCGCTaGTGGTTTGGGGTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: QQLWPWWSCQVLPKGALITTEIR*WFGVSF
Trigger: AAAGCTCACCCCAAACCAGCAGCGGATCTCAGTGGT...GATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp TCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTCCCGTGCCAGGATTCTaGCCTCACAGCGATAAGTGC +
Preference number: 4 (lower is better)
Translates to: STQNGCSAAVAMVVLPGSPVPGF*PHSDKC
Trigger: GCACTTATCGCTGTGAGGGCAGAATCCTGGCACGGG...AGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp TTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACAGGACTCCTGCCCAATaGGGTTCACTGCAGTACAGT +
Preference number: 4 (lower is better)
Translates to: LLSSCGHGGPARFFQRGHRTPAQ*GSLQYS
Trigger: ACTGTACTGCAGTGAACCGCATTGGGCAGGAGTCCT...GTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTAGGACTCCTGCCCAATaGGGTTCACTGCAGTACAGT +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAARTPAQ*GSLQYS
Trigger: ACTGTACTGCAGTGAACCGCATTGGGCAGGAGTCCT...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CTCTCCCATCTGCCCTTCGAGCTTAGGTGCACTGGGTTCCCCTTCTGCTTTCTGACTGCACCTGGGCTGTaGTGGAGTATGGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: LSHLPFELRCTGFPFCFLTAPGL*WSMAPP
Trigger: AGGTGGAGCCATACTCCAGCACAGCCCAGGTGCAGT...CAGAAAGCAGAAGGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR GCA 90 bp CAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTACTGCACCTGGGCTGTaGTGGAGTATGGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: QLWPWWSCQVLPKGALIFTAPGL*WSMAPP
Trigger: AGGTGGAGCCATACTCCAGCACAGCCCAGGTGCAGT...AAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTTCTGGTTCATCAAACTaGACCTGGGCTGTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAASGSSN*TWAVLE
Trigger: CTCCAGCACAGCCCAGGTGCAGTTTGATGAACCAGA...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTCTCGTCACACTTGAGTaGTCCTCCAGCAGAACTTGG +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAALVTLE*SSSRTW
Trigger: CCAAGTTCTGCTGGAGGAGCACTCAAGTGTGACGAG...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTATTGCCTCCCAAGGTTaGTGGGATGGCTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: QLWPWWSCQVLPKGALIFIASQG*WDGCGL
Trigger: CAGCCCACAGCCATCCCAGCAACCTTGGGAGGCAAT...AAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp CAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTCCCTTCGAGCTTAGGTaGACTGGGTTCCCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: QLWPWWSCQVLPKGALIFPFELR*TGFPSW
Trigger: CCAGCTAGGGAACCCAGTGCACCTAAGCTCGAAGGG...AAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526322.5
CDS-3UTR GCA 90 bp TCTCCCATCTGCCCTTCGAGCTTAGGTGCACTGGGTTCCCCTTCTGCTTTCTGCCCCTTCGAGCTTAGGTaGACTGGGTTCCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SPICPSSLGALGSPSAFCPFELR*TGFPFC
Trigger: GCAGAAGGGGAACCCAGTGCACCTAAGCTCGAAGGG...GCAGAAAGCAGAAGGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR GCA 90 bp CCCACACTGACCTGGGATCCTTATGCTCTGCCCTGTGCCCAAAAACCATGCCTGCACTCTGTGCTGATCTaGGACATGCTGCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PTLTWDPYALPCAQKPCLHSVLI*DMLPGS
Trigger: GCTGCCTGGCAGCATGTCGCAGATCAGCACAGAGTG...CAGGCATGGTTTTTGGGCACAGGGCAGAGCATAAGGATCCCAGGTCAGTGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp TCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTCCCAAAAACCATGCCTaGCTCCACTGCCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: STQNGCSAAVAMVVLPGSPKNHA*LHCPGV
Trigger: CACACCAGGGCAGTGGAGGCAGGCATGGTTTTTGGG...AGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp TCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCAGAAAGATGGACACTaGCCCTCTCCTGTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: SAAVAMVVLPGSSKGGTDQKDGH*PSPVGG
Trigger: ACCACCCACAGGAGAGGGGCAGTGTCCATCTTTCTG...ATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp GCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTCCAGATGATGGTTGGTaGGAGGGAGCTGACCACATC +
Preference number: 4 (lower is better)
Translates to: AAVAMVVLPGSSKGGTDLPDDGW*EGADHI
Trigger: GATGTGGTCAGCTCCCTCCCACCAACCATCATCTGG...AAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATGGCCGAGGTTGGCGGTaGCATTCACAATATTCTGCC +
Preference number: 4 (lower is better)
Translates to: SAAVAMVVLPGSSKGGTDGRGWR*HSQYSA
Trigger: GGCAGAATATTGTGAATGCCACCGCCAACCTCGGCC...ATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp AGTTTTGTGGCTGGGTTGAGAGGCACTACCCTGCCTGAGCTACTGTGCAGCATGGACGACACACGGGCATaGCTACGCACCACCATGTGC +
Preference number: 4 (lower is better)
Translates to: SFVAGLRGTTLPELLCSMDDTRA*LRTTMC
Trigger: GCACATGGTGGTGCGTAGCCATGCCCGTGTGTCGTC...CATGCTGCACAGTAGCTCAGGCAGGGTAGTGCCTCTCAACCCAGCCACAAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTGGGAGTCCTGGCCGATaGTGTTGCTGGCGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAGSPGR*CCWRCR
Trigger: TCTGCACCGCCAGCAACACCATCGGCCAGGACTCCC...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AGTTTTGTGGCTGGGTTGAGAGGCACTACCCTGCCTGAGCTACTGTGCAGCATGATGGACTGGGAGTCCTaGCCGATGGTGTTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: SFVAGLRGTTLPELLCSMMDWES*PMVLLA
Trigger: CGCCAGCAACACCATCGGCCAGGACTCCCAGTCCAT...CATGCTGCACAGTAGCTCAGGCAGGGTAGTGCCTCTCAACCCAGCCACAAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTCAGGTGATGTTCACCTaGTTCCCCTCCCAAGTGTAC +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAAQVMFT*FPSQVY
Trigger: GTACACTTGGGAGGGGAACCAGGTGAACATCACCTG...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AAAGCCATTCTGTGGGTCACTGCTGAACCACGGCCCCACTCTGTGCTGATCTGCGAGCTTGGCAGCAGCTaGCCATCCCGAAACCATGAG +
Preference number: 4 (lower is better)
Translates to: KAILWVTAEPRPHSVLICELGSS*PSRNHE
Trigger: CTCATGGTTTCGGGATGGCCAGCTGCTGCCAAGCTC...GCAGATCAGCACAGAGTGGGGCCGTGGTTCAGCAGTGACCCACAGAATGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp AATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGAGCTTGGCAGCAGCTaGCCATCCCGAAACCATGAG +
Preference number: 4 (lower is better)
Translates to: NGCSAAVAMVVLPGSSKGELGSS*PSRNHE
Trigger: CTCATGGTTTCGGGATGGCCAGCTGCTGCCAAGCTC...CCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTGCTGTAATTGGAGCTTaGCAGCAGCTGGCCATCCCG +
Preference number: 4 (lower is better)
Translates to: STQNGCSAAVAMVVLPGSAVIGA*QQLAIP
Trigger: CGGGATGGCCAGCTGCTGCCAAGCTCCAATTACAGC...AGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTGCTCCACCTGGTCGATaGATGGTGAAGAGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: SSTQNGCSAAVAMVVLPGAPPGR*MVKRGC
Trigger: ACACCCCCTCTTCACCATCCATCGACCAGGTGGAGC...ACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCAGAGTATGGCTCCACCTaGTCGATGGATGGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: VAQQLWPWWSCQVLPKGAEYGST*SMDGEE
Trigger: CTCTTCACCATCCATCGACCAGGTGGAGCCATACTC...TGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTCATCAAACTGCACCTaGGCTGTGCTGGAGTATGGC +
Preference number: 4 (lower is better)
Translates to: LLSSCGHGGPARFFQRGHSSNCT*AVLEYG
Trigger: GCCATACTCCAGCACAGCCCAGGTGCAGTTTGATGA...GTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTCGGGAGCCTGATCTCTaGTTTCCACTCGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: STQNGCSAAVAMVVLPGSREPDL*FPLGGE
Trigger: CTCTCCTCCGAGTGGAAACCAGAGATCAGGCTCCCG...AGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTGACTTCAGCATGACGTaGTCACTGCCAGACGGGAGC +
Preference number: 4 (lower is better)
Translates to: STQNGCSAAVAMVVLPGSDFSMT*SLPDGS
Trigger: GCTCCCGTCTGGCAGTGACCACGTCATGCTGAAGTC...AGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTGACTTCAGCATGACGTaGTCACTGCCAGACGGGAGC +
Preference number: 4 (lower is better)
Translates to: SSTQNGCSAAVAMVVLPGDFSMT*SLPDGS
Trigger: GCTCCCGTCTGGCAGTGACCACGTCATGCTGAAGTC...ACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTGGGATGGCTGTGGGCTaGGCCGAGGTCCTGAACACA +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAGMAVG*AEVLNT
Trigger: TGTGTTCAGGACCTCGGCCCAGCCCACAGCCATCCC...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGGGATGGCTGTGGGCTaGGCCGAGGTCCTGAACACA +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAGMAVG*AEVLNT
Trigger: TGTGTTCAGGACCTCGGCCCAGCCCACAGCCATCCC...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GGGGCCAGGGCTGTGTGTTCTGGGATCCTCCATTTCCATCCCCAGGAGCTGAGATGTTTCCCTCCATCATaGTTTGGGGTCCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GARAVCSGILHFHPQELRCFPPS*FGVLSS
Trigger: GGAGGAGAGGACCCCAAACCATGATGGAGGGAAACA...TCTCAGCTCCTGGGGATGGAAATGGAGGATCCCAGAACACACAGCCCTGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GGGGCCAGGGCTGTGTGTTCTGGGATCCTCCATTTCCATCCCCAGGAGCTGAGAAAGGGTGAGAACGCCTaGGAGCAGATCCCTTTTCAC +
Preference number: 4 (lower is better)
Translates to: GARAVCSGILHFHPQELRKGENA*EQIPFH
Trigger: GTGAAAAGGGATCTGCTCCCAGGCGTTCTCACCCTT...TCTCAGCTCCTGGGGATGGAAATGGAGGATCCCAGAACACACAGCCCTGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GGGGCCAGGGCTGTGTGTTCTGGGATCCTCCATTTCCATCCCCAGGAGCTGAGACAGGGCTGTGTGTTCTaGGATCCTCCATTTCCATCC +
Preference number: 4 (lower is better)
Translates to: GARAVCSGILHFHPQELRQGCVF*DPPFPS
Trigger: GGATGGAAATGGAGGATCCCAGAACACACAGCCCTG...TCTCAGCTCCTGGGGATGGAAATGGAGGATCCCAGAACACACAGCCCTGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTCCCTGCAGGGTCCAGTaGCCCTGCTCGTCACACTTG +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAPCRVQ*PCSSHL
Trigger: CAAGTGTGACGAGCAGGGCCACTGGACCCTGCAGGG...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AAAACCTTCTCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCGCCTCCCAAGGTTGCTaGGATGGCTGTGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: KTFSSTQNGCSAAVAMVVASQGC*DGCGLG
Trigger: GCCCAGCCCACAGCCATCCCAGCAACCTTGGGAGGC...GACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGAGAAGGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTTGGGAGCCTCCTGCTTaGCCTGAGGGGCTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAWEPPA*PEGLLW
Trigger: CCACAGAAGCCCCTCAGGCCAAGCAGGAGGCTCCCA...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR CCA 90 bp TTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCGGTGGAGGAGGGCTATaGACTGGCTGCGTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: FHTEWLLSSCGHGGPARFGGGGL*TGCVLN
Trigger: GTTCAAGACGCAGCCAGTCCATAGCCCTCCTCCACC...GAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTCAGCTGTGGCCATGGTaGTCCTGCCAGGTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: STQNGCSAAVAMVVLPGSQLWPW*SCQVLP
Trigger: TGGAAGAACCTGGCAGGACCACCATGGCCACAGCTG...AGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp AGGGACTTCAGCATGACGTGGTCACTGCCAGACGGGAGCCTGATCTCTGGTTTCCAGCAGCTGTGGCCATaGTGGTCCTGCCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: RDFSMTWSLPDGSLISGFQQLWP*WSCQVL
Trigger: AAGAACCTGGCAGGACCACCATGGCCACAGCTGCTG...GAAACCAGAGATCAGGCTCCCGTCTGGCAGTGACCACGTCATGCTGAAGTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR CCA 90 bp TTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACCTCTTCCACACAGAATaGTTGCTCAGCAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LLSSCGHGGPARFFQRGHLFHTE*LLSSCG
Trigger: GCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGAG...GTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp CAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCCTCTTCCACACAGAATaGTTGCTCAGCAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: QQLWPWWSCQVLPKGALILFHTE*LLSSCG
Trigger: GCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGAG...GATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp CTGCCTCCACTGCCCTGGTGTGAAGCGCCATCTGGGACTCCAGCGGGGAGAGTTCAGCATGGGATCATTTaGAATCCCAAAGGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: LPPLPWCEAPSGTPAGRVQHGII*NPKGKG
Trigger: GCCTTTCCCTTTGGGATTCCAAATGATCCCATGCTG...AACTCTCCCCGCTGGAGTCCCAGATGGCGCTTCACACCAGGGCAGTGGAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp AGCACACACACTGATATTACCAAGCAGGATTCAGCCCTGAGTCTCCACAAGGGATGTCTCCAGGACTCCTaGCGGGGCTGGGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: STHTDITKQDSALSLHKGCLQDS*RGWGCS
Trigger: GCTGCAGCCCCAGCCCCGCCAGGAGTCCTGGAGACA...TCCCTTGTGGAGACTCAGGGCTGAATCCTGCTTGGTAATATCAGTGTGTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
3UTR CAA 72 bp GAATGGACCCAGAGGCAGCCTTGCCACCCTAACCTCTaGCTGCTTTGTACCTTAGGAGAGGAGCGCATGCGG +
Preference number: 4 (lower is better)
Translates to: EWTQRQPCHPNL*LLCTLGEERMR
Trigger: CCGCATGCGCTCCTCTCCTAAGGTACAAAGCAGCAAGAGGTTAGGGTGGCAAGGCTGCCTCTGGGTCCATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGAGTGTGGACGGCGGCTaGGCGACAGACCTAGGGGCA +
Preference number: 4 (lower is better)
Translates to: NKREGPRSTECWVGMLMESVDGG*ATDLGA
Trigger: TGCCCCTAGGTCTGTCGCTCAGCCGCCGTCCACACT...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCGGGAACTATCGTCGCTaGAGATGTACTTCTCATCGT +
Preference number: 4 (lower is better)
Translates to: GCSAAVAMVVLPGSSKGGGNYRR*RCTSHR
Trigger: ACGATGAGAAGTACATCTTCAGCGACGATAGTTCCC...GCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTCTGCTTGAACAAGGATaGATTCCAAGGACTCCTGCC +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAALLEQG*IPRTPA
Trigger: GGCAGGAGTCCTTGGAATTCATCCTTGTTCAAGCAG...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTGAGGGGGTGTCTGCTTaGACAAGGATGAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAAEGVSA*TRMNSK
Trigger: CTTGGAATTCATCCTTGTTCAAGCAGACACCCCCTC...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACGAGGGGGTGTCTGCTTaGACAAGGATGAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: LLSSCGHGGPARFFQRGHEGVSA*TRMNSK
Trigger: CTTGGAATTCATCCTTGTTCAAGCAGACACCCCCTC...GTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp GTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCAGAGGGGGTGTCTGCTTaGACAAGGATGAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: VAQQLWPWWSCQVLPKGAEGVSA*TRMNSK
Trigger: CTTGGAATTCATCCTTGTTCAAGCAGACACCCCCTC...TGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTCCAGCCCTTTGCCATTaGGCGCCGCCAGCCTTACGG +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLPALCH*APPALR
Trigger: CCGTAAGGCTGGCGGCGCTCAATGGCAAAGGGCTGG...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGCCAGCCCTTTGCCATTaGGCGCCGCCAGCCTTACGG +
Preference number: 4 (lower is better)
Translates to: NKREGPRSTECWVGMLMEPALCH*APPALR
Trigger: CCGTAAGGCTGGCGGCGCTCAATGGCAAAGGGCTGG...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTACTCGGAGGCCGCGCTaGTCTCACCCAGCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLTRRPR*SHPALC
Trigger: GCAAAGGGCTGGGTGAGATCAGCGCGGCCTCCGAGT...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp AACATAGGTGGCTTTGCCCCTCAGACCACAGCATGGGATCATTTGGAATCCCAAACTCGGAGGCCGCGCTaGTCTCACCCAGCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: NIGGFAPQTTAWDHLESQTRRPR*SHPALC
Trigger: GCAAAGGGCTGGGTGAGATCAGCGCGGCCTCCGAGT...TTGGGATTCCAAATGATCCCATGCTGTGGTCTGAGGGGCAAAGCCACCTATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTTGCCAGACGGGAGCCTaGTCTCTGGTTTCCACTCGG +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEACQTGA*SLVSTR
Trigger: CCGAGTGGAAACCAGAGATCAGGCTCCCGTCTGGCA...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTTGCCAGACGGGAGCCTaGTCTCTGGTTTCCACTCGG +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAACQTGA*SLVSTR
Trigger: CCGAGTGGAAACCAGAGATCAGGCTCCCGTCTGGCA...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTCCAGGGACTTCAGCATaGCGTGGTCACTGCCAGACG +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAPGTSA*RGHCQT
Trigger: CGTCTGGCAGTGACCACGTCATGCTGAAGTCCCTGG...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTCCAGGGACTTCAGCATaGCGTGGTCACTGCCAGACG +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAPGTSA*RGHCQT
Trigger: CGTCTGGCAGTGACCACGTCATGCTGAAGTCCCTGG...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTGCTGGGCCGAGGTCCTaGACACAAAATGAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAAGPRS*TQNEPP
Trigger: AGGCGGCTCATTTTGTGTTCAGGACCTCGGCCCAGC...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCCCGGTGCTCAGGCCTaGGGTGGGGCTGCCGTTGGC +
Preference number: 4 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFPGAQA*GGAAVG
Trigger: GCCAACGGCAGCCCCACCTCAGGCCTGAGCACCGGG...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTCATGGGCAACAGGGGTaGCTTCAGTTGCCCATCATG +
Preference number: 4 (lower is better)
Translates to: SSTQNGCSAAVAMVVLPGHGQQG*LQLPIM
Trigger: CATGATGGGCAACTGAAGTCACCCCTGTTGCCCATG...ACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp CCCACACTGACCTGGGATCCTTATGCTCTGCCCTGTGCCCAAAAACCATGCCTGCGTGAGCCTCTAAACTaGGCGCTGGGGATTAATGGC +
Preference number: 4 (lower is better)
Translates to: PTLTWDPYALPCAQKPCLREPLN*ALGING
Trigger: GCCATTAATCCCCAGCGCTCAGTTTAGAGGCTCACG...CAGGCATGGTTTTTGGGCACAGGGCAGAGCATAAGGATCCCAGGTCAGTGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp GGCTGGGGCATTCAGGAAGCACTGACAGGTTGGCTCGGCCCCAATTTATTAACCAGGCACTACCCTGCCTaGGCTACTGTGCAGCATGGA +
Preference number: 4 (lower is better)
Translates to: GWGIQEALTGWLGPNLLTRHYPA*ATVQHG
Trigger: TCCATGCTGCACAGTAGCTCAGGCAGGGTAGTGCCT...GGTTAATAAATTGGGGCCGAGCCAACCTGTCAGTGCTTCCTGAATGCCCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp GGGCATTCAGGAAGCACTGACAGGTTGGCTCGGCCCCAATTTATTAACCCTCCTCAGCTGAGGCCTGCCTaGCCCTGGGATGTGTTGAGA +
Preference number: 4 (lower is better)
Translates to: GHSGSTDRLARPQFINPPQLRPA*PWDVLR
Trigger: TCTCAACACATCCCAGGGTCAGGCAGGCCTCAGCTG...AGGAGGGTTAATAAATTGGGGCCGAGCCAACCTGTCAGTGCTTCCTGAATGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp AGTTTTGTGGCTGGGTTGAGAGGCACTACCCTGCCTGAGCTACTGTGCAGCATGCCCGTGCCAGGATTCTaGCCTCACAGCGATAAGTGC +
Preference number: 4 (lower is better)
Translates to: SFVAGLRGTTLPELLCSMPVPGF*PHSDKC
Trigger: GCACTTATCGCTGTGAGGGCAGAATCCTGGCACGGG...CATGCTGCACAGTAGCTCAGGCAGGGTAGTGCCTCTCAACCCAGCCACAAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp GAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGTGGATGGTCGCATCCTaGTCGCCAGCCTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: EWLLSSCGHGGPARFFQRWMVAS*SPALFS
Trigger: TGAGAACAAGGCTGGCGAGCAGGATGCGACCATCCA...CCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp TTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACCCCAATGCGGTTCACTaGAGTACAGTTGTAGTTCCC +
Preference number: 4 (lower is better)
Translates to: LLSSCGHGGPARFFQRGHPNAVH*STVVVP
Trigger: GGGAACTACAACTGTACTGCAGTGAACCGCATTGGG...GTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp CCTGGTGTGAAGCGCCATCTGGGACTCCAGCGGGGAGAGTTTTGTGGCTGGGTTCCCAATGCGGTTCACTaGAGTACAGTTGTAGTTCCC +
Preference number: 4 (lower is better)
Translates to: PGVKRHLGLQRGEFCGWVPNAVH*STVVVP
Trigger: GGGAACTACAACTGTACTGCAGTGAACCGCATTGGG...AACCCAGCCACAAAACTCTCCCCGCTGGAGTCCCAGATGGCGCTTCACACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp GTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACCCAATGCGGTTCACTaGAGTACAGTTGTAGTTCCC +
Preference number: 4 (lower is better)
Translates to: VAQQLWPWWSCQVLPKGAPNAVH*STVVVP
Trigger: GGGAACTACAACTGTACTGCAGTGAACCGCATTGGG...TGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp GGGGCCAGGGCTGTGTGTTCTGGGATCCTCCATTTCCATCCCCAGGAGCTGAGAAATTCCAAGGACTCCTaGCCAATGCGGTTCACTGCA +
Preference number: 4 (lower is better)
Translates to: GARAVCSGILHFHPQELRNSKDS*PMRFTA
Trigger: TGCAGTGAACCGCATTGGGCAGGAGTCCTTGGAATT...TCTCAGCTCCTGGGGATGGAAATGGAGGATCCCAGAACACACAGCCCTGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ACCTTCTCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGACTGCACCTGGGCTGTaGTGGAGTATGGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: TFSSTQNGCSAAVAMVVLTAPGL*WSMAPP
Trigger: AGGTGGAGCCATACTCCAGCACAGCCCAGGTGCAGT...CAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGAGAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp TCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATTCTGGTTCATCAAACTaGACCTGGGCTGTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SAAVAMVVLPGSSKGGTDSGSSN*TWAVLE
Trigger: CTCCAGCACAGCCCAGGTGCAGTTTGATGAACCAGA...ATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTTCCCCTTGGACTGGCTaGGTCTTGAACTCGGAGGCC +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAASPWTG*VLNSEA
Trigger: GGCCTCCGAGTTCAAGACGCAGCCAGTCCAAGGGGA...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316851.12
ENST00000531044.5
CDS-3UTR GCA 90 bp TCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTCCATCCTCTCCCATCTaGCCTTCGAGCTTAGGTGCA +
Preference number: 4 (lower is better)
Translates to: STQNGCSAAVAMVVLPGSPSSPI*PSSLGA
Trigger: TGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGG...AGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp CTCTCCCATCTGCCCTTCGAGCTTAGGTGCACTGGGTTCCCCTTCTGCTTTCTGCCATCCTCTCCCATCTaGCCTTCGAGCTTAGGTGCA +
Preference number: 4 (lower is better)
Translates to: LSHLPFELRCTGFPFCFLPSSPI*PSSLGA
Trigger: TGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGG...CAGAAAGCAGAAGGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR GCA 90 bp CAGACACCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCCTCCATGTCCTTaGCCTTGGCCCCGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: QTPRLSHSTVCSKISLHVPPPCP*PWPRAR
Trigger: CCGGGCCCGGGGCCAAGGGCAAGGACATGGAGGAGG...AACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGGTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTTATACACCACAGCCCTaGAGGGTCCAGTGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAYTPQP*RVQWPC
Trigger: GCAGGGCCACTGGACCCTGCAGGGCTGTGGTGTATA...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTGGTTCCCGGACTGGCTaGGTCTTGAACTCGGAGGCC +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWAGSRTG*VLNSEA
Trigger: GGCCTCCGAGTTCAAGACGCAGCCAGTCCGGGAACC...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000401611.6
CDS-3UTR GCA 90 bp GGCTGGGGCATTCAGGAAGCACTGACAGGTTGGCTCGGCCCCAATTTATTAACCATTGCCTCCCAAGGTTaGTGGGATGGCTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: GWGIQEALTGWLGPNLLTIASQG*WDGCGL
Trigger: CAGCCCACAGCCATCCCAGCAACCTTGGGAGGCAAT...GGTTAATAAATTGGGGCCGAGCCAACCTGTCAGTGCTTCCTGAATGCCCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp AATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGAGCTGGTTCTGTGGTTaGAAGGGCAGGAAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: NGCSAAVAMVVLPGSSKGSWFCG*KGRKRP
Trigger: TGGCCTCTTCCTGCCCTTGCAACCACAGAACCAGCT...CCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp AGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGTGGCCATGGTGGTCCTaGCAGGTTCTTCCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: RMVAQQLWPWWSCQVLPKWPWWS*QVLPKG
Trigger: CCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCA...CTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp CCACTGCCCTGGTGTGAAGCGCCATCTGGGACTCCAGCGGGGAGAGTTTTGTGGAGGGGTGACTTCAGTTaGCCATCATGTCAGCAAAAC +
Preference number: 4 (lower is better)
Translates to: PLPWCEAPSGTPAGRVLWRGDFS*PSCQQN
Trigger: GTTTTGCTGACATGATGGGCAACTGAAGTCACCCCT...CCACAAAACTCTCCCCGCTGGAGTCCCAGATGGCGCTTCACACCAGGGCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp AGACTGATGCTCAAAGCCATTCTGTGGGTCACTGCTGAACCACGGCCCCACTCTCACTCTGTGCTGATCTaGGACATGCTGCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: RLMLKAILWVTAEPRPHSHSVLI*DMLPGS
Trigger: GCTGCCTGGCAGCATGTCGCAGATCAGCACAGAGTG...AGAGTGGGGCCGTGGTTCAGCAGTGACCCACAGAATGGCTTTGAGCATCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp AGCTCTCCCACACTGACCTGGGATCCTTATGCTCTGCCCTGTGCCCAAAAACCATGTGCCCAAAAACCATaGCTGCCTCCACTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SSPTLTWDPYALPCAQKPCAQKP*LPPLPW
Trigger: CCAGGGCAGTGGAGGCAGGCATGGTTTTTGGGCACA...TGGTTTTTGGGCACAGGGCAGAGCATAAGGATCCCAGGTCAGTGTGGGAGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp CAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTGTTTCAGCTGAGGCCTaGCTGACCCTGGGATGTGTT +
Preference number: 4 (lower is better)
Translates to: QLWPWWSCQVLPKGALIFVSAEA*LTLGCV
Trigger: AACACATCCCAGGGTCAGGCAGGCCTCAGCTGAAAC...AAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp GGTGTGGCAAAGCCATCGACATTACAAGATGAAGAACTGAGTCCACTGAACAGCCCCCTGCAGCGAGTGTaGACGGCGGCTGAGCGACAG +
Preference number: 4 (lower is better)
Translates to: GVAKPSTLQDEELSPLNSPLQRV*TAAERQ
Trigger: CTGTCGCTCAGCCGCCGTCCACACTCGCTGCAGGGG...GCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTACGCTGATCTCCCCCTaGCTGGGAACAATATCCACC +
Preference number: 4 (lower is better)
Translates to: SSTQNGCSAAVAMVVLPGTLISP*LGTIST
Trigger: GGTGGATATTGTTCCCAGCCAGGGGGAGATCAGCGT...ACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTGAACTCCTGTGGGGTTaGCGCATTCTTGAACATGAG +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAAELLWG*RILEHE
Trigger: CTCATGTTCAAGAATGCGCCAACCCCACAGGAGTTC...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTCCAGATGATGGTTGGTaGGAGGGAGCTGACCACATC +
Preference number: 4 (lower is better)
Translates to: SSTQNGCSAAVAMVVLPGPDDGW*EGADHI
Trigger: GATGTGGTCAGCTCCCTCCCACCAACCATCATCTGG...ACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGCCGAGGTTGGCGGTaGCATTCACAATATTCTGCC +
Preference number: 4 (lower is better)
Translates to: EWLLSSCGHGGPARFFQRGRGWR*HSQYSA
Trigger: GGCAGAATATTGTGAATGCCACCGCCAACCTCGGCC...CCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTCATGGTGGGCTCTaGGAAGCCTTCGGCATCGCA +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAAHGGL*EAFGIA
Trigger: TGCGATGCCGAAGGCTTCCCAGAGCCCACCATGAGC...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTCCTTTGTCCAGCTCATaGTGGGCTCTGGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: QLWPWWSCQVLPKGALIFPLSSS*WALGSL
Trigger: AAGGCTTCCCAGAGCCCACCATGAGCTGGACAAAGG...AAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTGACGACACACGGGCATaGCTACGCACCACCATGTGC +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAADDTRA*LRTTMC
Trigger: GCACATGGTGGTGCGTAGCCATGCCCGTGTGTCGTC...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTGGGAGTCCTGGCCGATaGTGTTGCTGGCGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWAGSPGR*CCWRCR
Trigger: TCTGCACCGCCAGCAACACCATCGGCCAGGACTCCC...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTATGGACTGGGAGTCCTaGCCGATGGTGTTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAMDWES*PMVLLA
Trigger: CGCCAGCAACACCATCGGCCAGGACTCCCAGTCCAT...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCAAGGTACATGGACTaGGAGTCCTGGCCGATGGTG +
Preference number: 4 (lower is better)
Translates to: SSTQNGCSAAVAMVVLPGSRYMD*ESWPMV
Trigger: CACCATCGGCCAGGACTCCCAGTCCATGTACCTTGA...ACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp AGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGCTGTAATTGGAGCTTaGCAGCAGCTGGCCATCCCG +
Preference number: 4 (lower is better)
Translates to: RMVAQQLWPWWSCQVLPKAVIGA*QQLAIP
Trigger: CGGGATGGCCAGCTGCTGCCAAGCTCCAATTACAGC...CTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATTCACCTCCAGATAGCTaGCAGAGGGGGTGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: SAAVAMVVLPGSSKGGTDSPPDS*QRGCCR
Trigger: TCTACAACACCCCCTCTGCCAGCTATCTGGAGGTGA...ATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp ACCTTCTCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGGGCTGTGCTGGAGTATaGCTCCACCTGGTCGATGGA +
Preference number: 4 (lower is better)
Translates to: TFSSTQNGCSAAVAMVVLGCAGV*LHLVDG
Trigger: TCCATCGACCAGGTGGAGCCATACTCCAGCACAGCC...CAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGAGAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTGCACCTGGGCTGTGCTaGAGTATGGCTCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAAPGLC*SMAPPG
Trigger: ACCAGGTGGAGCCATACTCCAGCACAGCCCAGGTGC...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GGGCATTCAGGAAGCACTGACAGGTTGGCTCGGCCCCAATTTATTAACCCTCCTGCACCTGGGCTGTGCTaGAGTATGGCTCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: GHSGSTDRLARPQFINPPAPGLC*SMAPPG
Trigger: ACCAGGTGGAGCCATACTCCAGCACAGCCCAGGTGC...AGGAGGGTTAATAAATTGGGGCCGAGCCAACCTGTCAGTGCTTCCTGAATGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp AAAGCCATTCTGTGGGTCACTGCTGAACCACGGCCCCACTCTGTGCTGATCTGCTGGGCACCCCACCTGTaGCCTCTGGTTCATCAAACT +
Preference number: 4 (lower is better)
Translates to: KAILWVTAEPRPHSVLICWAPHL*PLVHQT
Trigger: AGTTTGATGAACCAGAGGCCACAGGTGGGGTGCCCA...GCAGATCAGCACAGAGTGGGGCCGTGGTTCAGCAGTGACCCACAGAATGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp CAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTCGATGCCCTCCATGCTaGCTTCCTTGGCATCATACC +
Preference number: 4 (lower is better)
Translates to: QLWPWWSCQVLPKGALIFRCPPC*LPWHHT
Trigger: GGTATGATGCCAAGGAAGCCAGCATGGAGGGCATCG...AAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTCGATGCCCTCCATGCTaGCTTCCTTGGCATCATACC +
Preference number: 4 (lower is better)
Translates to: STQNGCSAAVAMVVLPGSRCPPC*LPWHHT
Trigger: GGTATGATGCCAAGGAAGCCAGCATGGAGGGCATCG...AGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp ACCTTCTCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCGGGAGCCTGATCTCTaGTTTCCACTCGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: TFSSTQNGCSAAVAMVVLREPDL*FPLGGE
Trigger: CTCTCCTCCGAGTGGAAACCAGAGATCAGGCTCCCG...CAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGAGAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp AGTTTTGTGGCTGGGTTGAGAGGCACTACCCTGCCTGAGCTACTGTGCAGCATGCGGGAGCCTGATCTCTaGTTTCCACTCGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: SFVAGLRGTTLPELLCSMREPDL*FPLGGE
Trigger: CTCTCCTCCGAGTGGAAACCAGAGATCAGGCTCCCG...CATGCTGCACAGTAGCTCAGGCAGGGTAGTGCCTCTCAACCCAGCCACAAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp ACCTTCTCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGGACTTCAGCATGACGTaGTCACTGCCAGACGGGAGC +
Preference number: 4 (lower is better)
Translates to: TFSSTQNGCSAAVAMVVLDFSMT*SLPDGS
Trigger: GCTCCCGTCTGGCAGTGACCACGTCATGCTGAAGTC...CAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGAGAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGGGGATGGCTGTGGGCTaGGCCGAGGTCCTGAACACA +
Preference number: 4 (lower is better)
Translates to: WSCQVLPKGALIFFIGTGGMAVG*AEVLNT
Trigger: TGTGTTCAGGACCTCGGCCCAGCCCACAGCCATCCC...CCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp CCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAGGGATGGCTGTGGGCTaGGCCGAGGTCCTGAACACA +
Preference number: 4 (lower is better)
Translates to: PWWSCQVLPKGALIFFIGGMAVG*AEVLNT
Trigger: TGTGTTCAGGACCTCGGCCCAGCCCACAGCCATCCC...TCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp CAGACACCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTGGGGCTGCCGTTGGCTaGGATGGCTGTGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: QTPRLSHSTVCSKISLHVGAAVG*DGCGLG
Trigger: GCCCAGCCCACAGCCATCCCAGCCAACGGCAGCCCC...AACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGGTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTCCGTCAGTGGCGTaGTCTCGTTGGGCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAAPSVA*SRWALC
Trigger: ACACAGAGCCCAACGAGACCACGCCACTGACGGAGC...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTGTGCTAAAGCAAGCGTaGGATGATCCTACCTACCTC +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAAVLKQA*DDPTYL
Trigger: GAGGTAGGTAGGATCATCCCACGCTTGCTTTAGCAC...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTTACTGGAGGTCAGGGTaGTGGTCTCACTGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAYWRSG*WSHWWG
Trigger: GCCCCACCAGTGAGACCACCACCCTGACCTCCAGTA...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR CCA 90 bp TCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTAGGAGGGCTATGGACTaGCTGCGTCTTGAACTCGGA +
Preference number: 4 (lower is better)
Translates to: STQNGCSAAVAMVVLPGSRRAMD*LRLELG
Trigger: TCCGAGTTCAAGACGCAGCCAGTCCATAGCCCTCCT...AGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp AGTTTTGTGGCTGGGTTGAGAGGCACTACCCTGCCTGAGCTACTGTGCAGCATGGGTGGAGGAGGGCTATaGACTGGCTGCGTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: SFVAGLRGTTLPELLCSMGGGGL*TGCVLN
Trigger: GTTCAAGACGCAGCCAGTCCATAGCCCTCCTCCACC...CATGCTGCACAGTAGCTCAGGCAGGGTAGTGCCTCTCAACCCAGCCACAAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621518.4
CDS-3UTR CCA 90 bp AGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGCAGCTGTGGCCATGGTaGTCCTGCCAGGTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: RMVAQQLWPWWSCQVLPKQLWPW*SCQVLP
Trigger: TGGAAGAACCTGGCAGGACCACCATGGCCACAGCTG...CTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GGCTGGGGCATTCAGGAAGCACTGACAGGTTGGCTCGGCCCCAATTTATTAACCCAGCTGTGGCCATGGTaGTCCTGCCAGGTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: GWGIQEALTGWLGPNLLTQLWPW*SCQVLP
Trigger: TGGAAGAACCTGGCAGGACCACCATGGCCACAGCTG...GGTTAATAAATTGGGGCCGAGCCAACCTGTCAGTGCTTCCTGAATGCCCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp GCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTCTCTTCCACACAGAATaGTTGCTCAGCAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: AAVAMVVLPGSSKGGTDLLFHTE*LLSSCG
Trigger: GCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGAG...AAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTACCCATTTCCTCTCCTaGGTGAACTCCCAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: AAVAMVVLPGSSKGGTDLTHFLS*VNSQAA
Trigger: TGCTGCTTGGGAGTTCACCCAGGAGAGGAAATGGGT...AAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp CCACTGCCCTGGTGTGAAGCGCCATCTGGGACTCCAGCGGGGAGAGTTTTGTGGCAGCATGGGATCATTTaGAATCCCAAAGGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: PLPWCEAPSGTPAGRVLWQHGII*NPKGKG
Trigger: GCCTTTCCCTTTGGGATTCCAAATGATCCCATGCTG...CCACAAAACTCTCCCCGCTGGAGTCCCAGATGGCGCTTCACACCAGGGCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp GTGGATGCTTCCAACCTGTCCTGTAGACTGATGCTCAAAGCCATTCTGTGGGTCTCCTGTGGGTGGTCCTaGGATCAGGGGGAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: VDASNLSCRLMLKAILWVSCGWS*DQGEAD
Trigger: GTCTGCCTCCCCCTGATCCCAGGACCACCCACAGGA...GACCCACAGAATGGCTTTGAGCATCAGTCTACAGGACAGGTTGGAAGCATCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp CCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGCCCCTCTCCTGTaGGTGGTCCTGGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: PWWSCQVLPKGALIFFIGTAPLL*VVLGSG
Trigger: CCCTGATCCCAGGACCACCCACAGGAGAGGGGCAGT...TCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp AGCTCTCCCACACTGACCTGGGATCCTTATGCTCTGCCCTGTGCCCAAAAACCAGGGTTCCCCTGTAGCTaGTTCTGTGGTTGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: SSPTLTWDPYALPCAQKPGFPCS*FCGCKG
Trigger: GCCCTTGCAACCACAGAACCAGCTACAGGGGAACCC...TGGTTTTTGGGCACAGGGCAGAGCATAAGGATCCCAGGTCAGTGTGGGAGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621518.4
CDS-3UTR TCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTGTTGACGGTGGCCTCTaGCTCACTGCCATCCTCGCC +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLVDGGL*LTAILA
Trigger: GGCGAGGATGGCAGTGAGTCAGAGGCCACCGTCAAC...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp GAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGAAAGATCTTCACGTTaGCGGTGGCCTCTGACTCAC +
Preference number: 4 (lower is better)
Translates to: EWLLSSCGHGGPARFFQRERSSR*RWPLTH
Trigger: GTGAGTCAGAGGCCACCGTCAACGTGAAGATCTTTC...CCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp TTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCCTTTGTGTTTCCAGATaGTGGTTGGTGGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: FHTEWLLSSCGHGGPARFLCVSR*WLVGGS
Trigger: GCTCCCTCCCACCAACCATCATCTGGAAACACAAAG...GAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp CCCACACTGACCTGGGATCCTTATGCTCTGCCCTGTGCCCAAAAACCATGCCTGCTTTGTGTTTCCAGATaGTGGTTGGTGGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: PTLTWDPYALPCAQKPCLLCVSR*WLVGGS
Trigger: GCTCCCTCCCACCAACCATCATCTGGAAACACAAAG...CAGGCATGGTTTTTGGGCACAGGGCAGAGCATAAGGATCCCAGGTCAGTGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp CAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTCTTTGTGTTTCCAGATaGTGGTTGGTGGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: QLWPWWSCQVLPKGALIFLCVSR*WLVGGS
Trigger: GCTCCCTCCCACCAACCATCATCTGGAAACACAAAG...AAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp AATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGCCTCATCTGTTTTCTTaGTGCCCCGGATCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: NGCSAAVAMVVLPGSSKGPHLFS*CPGSAG
Trigger: ACCTGCAGATCCGGGGCATCAAGAAAACAGATGAGG...CCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp CAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCGGGAACTATCGTCGCTaGAGATGTACTTCTCATCGT +
Preference number: 4 (lower is better)
Translates to: QQLWPWWSCQVLPKGALIGNYRR*RCTSHR
Trigger: ACGATGAGAAGTACATCTTCAGCGACGATAGTTCCC...GATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp TCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTGCTTGAACAAGGATaGATTCCAAGGACTCCTGCC +
Preference number: 4 (lower is better)
Translates to: SAAVAMVVLPGSSKGGTDLLEQG*IPRTPA
Trigger: GGCAGGAGTCCTTGGAATTCATCCTTGTTCAAGCAG...ATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp TCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATGAGGGGGTGTCTGCTTaGACAAGGATGAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: SAAVAMVVLPGSSKGGTDEGVSA*TRMNSK
Trigger: CTTGGAATTCATCCTTGTTCAAGCAGACACCCCCTC...ATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTCTGGTCGATGGATGGTaGAGAGGGGGTGTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAALVDGW*RGGVCL
Trigger: CAAGCAGACACCCCCTCTTCACCATCCATCGACCAG...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTTCAGGCCCACGATGGTaGCGATGCCCTCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: WWSCQVLPKGALIFFIGTSGPRW*RCPPCW
Trigger: CCAGCATGGAGGGCATCGTCACCATCGTGGGCCTGA...AGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTACTCGGAGGCCGCGCTaGTCTCACCCAGCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFTRRPR*SHPALC
Trigger: GCAAAGGGCTGGGTGAGATCAGCGCGGCCTCCGAGT...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp TGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGTGCCAGACGGGAGCCTaGTCTCTGGTTTCCACTCGG +
Preference number: 4 (lower is better)
Translates to: WSCQVLPKGALIFFIGTGCQTGA*SLVSTR
Trigger: CCGAGTGGAAACCAGAGATCAGGCTCCCGTCTGGCA...CCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp GTCCTCTCCACACTTAGGACGAGATCTCCAAAGGGTCCCTTCAGAAAGATGGACTGCCAGACGGGAGCCTaGTCTCTGGTTTCCACTCGG +
Preference number: 4 (lower is better)
Translates to: VLSTLRTRSPKGPFRKMDCQTGA*SLVSTR
Trigger: CCGAGTGGAAACCAGAGATCAGGCTCCCGTCTGGCA...GTCCATCTTTCTGAAGGGACCCTTTGGAGATCTCGTCCTAAGTGTGGAGAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp CCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGACCAGGGACTTCAGCATaGCGTGGTCACTGCCAGACG +
Preference number: 4 (lower is better)
Translates to: PWWSCQVLPKGALIFFIGPGTSA*RGHCQT
Trigger: CGTCTGGCAGTGACCACGTCATGCTGAAGTCCCTGG...TCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTCCAGGGACTTCAGCATaGCGTGGTCACTGCCAGACG +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWAPGTSA*RGHCQT
Trigger: CGTCTGGCAGTGACCACGTCATGCTGAAGTCCCTGG...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000401611.6
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTGCTGGGCCGAGGTCCTaGACACAAAATGAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWAAGPRS*TQNEPP
Trigger: AGGCGGCTCATTTTGTGTTCAGGACCTCGGCCCAGC...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000401611.6
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp CACAAAATGAGCCGCCTTGGATTTTCCTTGCTGGTTCTCAGCCACCACGTAGACGCTGGGCCGAGGTCCTaGACACAAAATGAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: HKMSRLGFSLLVLSHHVDAGPRS*TQNEPP
Trigger: AGGCGGCTCATTTTGTGTTCAGGACCTCGGCCCAGC...GTCTACGTGGTGGCTGAGAACCAGCAAGGAAAATCCAAGGCGGCTCATTTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR TCA 90 bp GGGGCCAGGGCTGTGTGTTCTGGGATCCTCCATTTCCATCCCCAGGAGCTGAGACATGTTCCTCTATTCTaGGGGCCTGTGCATTTGAAC +
Preference number: 4 (lower is better)
Translates to: GARAVCSGILHFHPQELRHVPLF*GPVHLN
Trigger: GTTCAAATGCACAGGCCCTCAGAATAGAGGAACATG...TCTCAGCTCCTGGGGATGGAAATGGAGGATCCCAGAACACACAGCCCTGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTCATGTTCCTCTATTCTaGGGGCCTGTGCATTTGAAC +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAAHVPLF*GPVHLN
Trigger: GTTCAAATGCACAGGCCCTCAGAATAGAGGAACATG...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp AGTTTTGTGGCTGGGTTGAGAGGCACTACCCTGCCTGAGCTACTGTGCAGCATGCGTGAGCCTCTAAACTaGGCGCTGGGGATTAATGGC +
Preference number: 4 (lower is better)
Translates to: SFVAGLRGTTLPELLCSMREPLN*ALGING
Trigger: GCCATTAATCCCCAGCGCTCAGTTTAGAGGCTCACG...CATGCTGCACAGTAGCTCAGGCAGGGTAGTGCCTCTCAACCCAGCCACAAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp AGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGTGGGATGTGTTGAGATaGCAGGGCCACGTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: RMVAQQLWPWWSCQVLPKWDVLR*QGHVSP
Trigger: AGGACTGACGTGGCCCTGTCATCTCAACACATCCCA...CTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp TGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATACAGCTGAGGCCTGCCTaGCCCTGGGATGTGTTGAGA +
Preference number: 4 (lower is better)
Translates to: WPWWSCQVLPKGALIFFIQLRPA*PWDVLR
Trigger: TCTCAACACATCCCAGGGTCAGGCAGGCCTCAGCTG...TATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTCTCCTGCAGGGTCTCTaGGGGCTGCTGTCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLLLQGL*GLLSPG
Trigger: TCCTGGAGACAGCAGCCCTCAGAGACCCTGCAGGAG...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAACAGCGGCAGCCGAGCTaGGTTCACGCGCTGATCGGA +
Preference number: 4 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCEQRQPS*VHALIG
Trigger: TCCGATCAGCGCGTGAACGCAGCTCGGCTGCCGCTG...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTTGCAGAATTGTTTCCTaGCAGCGGCAGCCGAGCTGC +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAACRIVS*QRQPSC
Trigger: GCAGCTCGGCTGCCGCTGGCAGGAAACAATTCTGCA...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp AATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGTGGGAGGGATGTTCTTaGCGCGGTAAATTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: NGCSAAVAMVVLPGSSKGWEGCS*RGKFCA
Trigger: GGCACAGAATTTACCGCGGCAAGAACATCCCTCCCA...CCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp TCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTCCACACACTTGTAAATaGCGGCGTCGTCGATGTTGG +
Preference number: 4 (lower is better)
Translates to: STQNGCSAAVAMVVLPGSPHTCK*RRRRCW
Trigger: CCAACATCGACGACGCCGGCATTTACAAGTGTGTGG...AGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTCCCGTGCCAGGATTCTaGCCTCACAGCGATAAGTGC +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAPVPGF*PHSDKC
Trigger: GCACTTATCGCTGTGAGGGCAGAATCCTGGCACGGG...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCGCATTCACAATATTCTaGCTGGCCTGGATGGTAGGT +
Preference number: 4 (lower is better)
Translates to: QQLWPWWSCQVLPKGALIAFTIF*LAWMVG
Trigger: ACCTACCATCCAGGCCAGGCAGAATATTGTGAATGC...GATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp TTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACCCTTGTTCTCAGCAATaGAGATGTACTCAGCCTCGT +
Preference number: 4 (lower is better)
Translates to: LLSSCGHGGPARFFQRGHPCSQQ*RCTQPR
Trigger: ACGAGGCTGAGTACATCTGCATTGCTGAGAACAAGG...GTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp GTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACCTTGTTCTCAGCAATaGAGATGTACTCAGCCTCGT +
Preference number: 4 (lower is better)
Translates to: VAQQLWPWWSCQVLPKGAPCSQQ*RCTQPR
Trigger: ACGAGGCTGAGTACATCTGCATTGCTGAGAACAAGG...TGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp GGCTGGGGCATTCAGGAAGCACTGACAGGTTGGCTCGGCCCCAATTTATTAACCTGGATGGTCGCATCCTaGTCGCCAGCCTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: GWGIQEALTGWLGPNLLTWMVAS*SPALFS
Trigger: TGAGAACAAGGCTGGCGAGCAGGATGCGACCATCCA...GGTTAATAAATTGGGGCCGAGCCAACCTGTCAGTGCTTCCTGAATGCCCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp GGGGCCAGGGCTGTGTGTTCTGGGATCCTCCATTTCCATCCCCAGGAGCTGAGACAGGTAAGAGTGACCTaGTCCTCTAATTCCATGGCA +
Preference number: 4 (lower is better)
Translates to: GARAVCSGILHFHPQELRQVRVT*SSNSMA
Trigger: TGCCATGGAATTAGAGGAGCAGGTCACTCTTACCTG...TCTCAGCTCCTGGGGATGGAAATGGAGGATCCCAGAACACACAGCCCTGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTCAGGTAAGAGTGACCTaGTCCTCTAATTCCATGGCA +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAAQVRVT*SSNSMA
Trigger: TGCCATGGAATTAGAGGAGCAGGTCACTCTTACCTG...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTCATCAGTGTACTGGATaGTCTTCAGGGTCAGCGACG +
Preference number: 4 (lower is better)
Translates to: QLWPWWSCQVLPKGALIFHQCTG*SSGSAT
Trigger: CGTCGCTGACCCTGAAGAGCATCCAGTACACTGATG...AAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp ACCTTCTCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGTGGTGTTGCTGGCGGTaGAGATGTACTCTCCGGCAT +
Preference number: 4 (lower is better)
Translates to: TFSSTQNGCSAAVAMVVLWCCWR*RCTLRH
Trigger: ATGCCGGAGAGTACATCTGCACCGCCAGCAACACCA...CAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGAGAAGGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTCCTGGCCGATGGTGTTaGTGGCGGTGCAGATGTACT +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAPGRWC*WRCRCT
Trigger: AGTACATCTGCACCGCCAGCAACACCATCGGCCAGG...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTAGGACTCCTGCCCAATaGGGTTCACTGCAGTACAGT +
Preference number: 4 (lower is better)
Translates to: SSTQNGCSAAVAMVVLPGRTPAQ*GSLQYS
Trigger: ACTGTACTGCAGTGAACCGCATTGGGCAGGAGTCCT...ACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTACTGCACCTGGGCTGTaGTGGAGTATGGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEATAPGL*WSMAPP
Trigger: AGGTGGAGCCATACTCCAGCACAGCCCAGGTGCAGT...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTACTGCACCTGGGCTGTaGTGGAGTATGGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAATAPGL*WSMAPP
Trigger: AGGTGGAGCCATACTCCAGCACAGCCCAGGTGCAGT...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTCCCTTCGAGCTTAGGTaGACTGGGTTCCCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAPFELR*TGFPLD
Trigger: GTCCAAGGGGAACCCAGTGCACCTAAGCTCGAAGGG...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316851.12
ENST00000531044.5
CDS-3UTR GCA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCCTCCTCCATGTCCTTaGCCTTGGCCCCGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFPPPCP*PWPRAR
Trigger: CCGGGCCCGGGGCCAAGGGCAAGGACATGGAGGAGG...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTCTGGCACTCTGGCTTTaGTTCTACGGGGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEALALWL*FYGALL
Trigger: GAGAAGGGCCCCGTAGAAGCAAAGCCAGAGTGCCAG...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTTCTGAAACTGGTCTGTaGCAATCGGGTAACACCAAG +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAASETGL*QSGNTK
Trigger: CTTGGTGTTACCCGATTGGCACAGACCAGTTTCAGA...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCCTGCCCCTCACTaGTGGGCCCTCCCGGTCTCA +
Preference number: 4 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSEPAPH*WALPVS
Trigger: TGAGACCGGGAGGGCCCAGCAGTGAGGGGCAGGCTC...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTAGCAGAACTTGGCCATaGCGGTCTTCATGTGAATAC +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAASRTWP*RSSCEY
Trigger: GTATTCACATGAAGACCGGCATGGCCAAGTTCTGCT...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTACGCACCACCATGTaGCCATCCAGAGTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: SAAVAMVVLPGSSKGGTDLRTTM*PSRVFS
Trigger: AGAAAAGACTCTGGATGGGCACATGGTGGTGCGTAG...ATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCCCTTCTCGGTCTTTaGTGGCGCAGGCGAAACAGA +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAALLGL*WRRRNR
Trigger: TCTGTTTCGCCTGCGCCAGCAAAGACCGAGAAGGGC...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR GCA 90 bp TGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGGCTATGGACTGGCTaGGTCTTGAACTCGGAGGCC +
Preference number: 4 (lower is better)
Translates to: WPWWSCQVLPKGALIFFIGLWTG*VLNSEA
Trigger: GGCCTCCGAGTTCAAGACGCAGCCAGTCCATAGCCC...TATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp CCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGACATGCCTGCCTCCACTaGCCTGGTGTGAAGCGCCAT +
Preference number: 4 (lower is better)
Translates to: PWWSCQVLPKGALIFFIGHACLH*PGVKRH
Trigger: ATGGCGCTTCACACCAGGGCAGTGGAGGCAGGCATG...TCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp CGCCAACATAGGTGGCTTTGCCCCTCAGACCACAGCATGGGATCATTTGGAATCTGTGCCCAAAAACCATaGCTGCCTCCACTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: RQHRWLCPSDHSMGSFGICAQKP*LPPLPW
Trigger: CCAGGGCAGTGGAGGCAGGCATGGTTTTTGGGCACA...GATTCCAAATGATCCCATGCTGTGGTCTGAGGGGCAAAGCCACCTATGTTGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp TCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATATATTCTGCCTGGCCTaGATGGTAGGTGGCACATTC +
Preference number: 4 (lower is better)
Translates to: SAAVAMVVLPGSSKGGTDIFCLA*MVGGTF
Trigger: GAATGTGCCACCTACCATCCAGGCCAGGCAGAATAT...ATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTGCTCATGGTGGGCTCTaGGAAGCCTTCGGCATCGCA +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWAAHGGL*EAFGIA
Trigger: TGCGATGCCGAAGGCTTCCCAGAGCCCACCATGAGC...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTGACGACACACGGGCATaGCTACGCACCACCATGTGC +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWADDTRA*LRTTMC
Trigger: GCACATGGTGGTGCGTAGCCATGCCCGTGTGTCGTC...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGACGACACACGGGCATaGCTACGCACCACCATGTGC +
Preference number: 4 (lower is better)
Translates to: WPWWSCQVLPKGALIFFIDDTRA*LRTTMC
Trigger: GCACATGGTGGTGCGTAGCCATGCCCGTGTGTCGTC...TATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTGGCCGATGGTGTTGCTaGCGGTGCAGATGTACTCTC +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAGRWCC*RCRCTL
Trigger: GAGAGTACATCTGCACCGCCAGCAACACCATCGGCC...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTATGGACTGGGAGTCCTaGCCGATGGTGTTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWAMDWES*PMVLLA
Trigger: CGCCAGCAACACCATCGGCCAGGACTCCCAGTCCAT...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTATGAGATCGTGGCACTaGGATAGGCAAATACCTCGC +
Preference number: 4 (lower is better)
Translates to: AAVAMVVLPGSSKGGTDLMRSWH*DRQIPR
Trigger: GCGAGGTATTTGCCTATCCCAGTGCCACGATCTCAT...AAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGAGCTTGGCAGCAGCTaGCCATCCCGAAACCATGAG +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAELGSS*PSRNHE
Trigger: CTCATGGTTTCGGGATGGCCAGCTGCTGCCAAGCTC...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GGGCATTCAGGAAGCACTGACAGGTTGGCTCGGCCCCAATTTATTAACCCTCCTGAGCTTGGCAGCAGCTaGCCATCCCGAAACCATGAG +
Preference number: 4 (lower is better)
Translates to: GHSGSTDRLARPQFINPPELGSS*PSRNHE
Trigger: CTCATGGTTTCGGGATGGCCAGCTGCTGCCAAGCTC...AGGAGGGTTAATAAATTGGGGCCGAGCCAACCTGTCAGTGCTTCCTGAATGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTGTAATTGGAGCTTaGCAGCAGCTGGCCATCCCG +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAAVIGA*QQLAIP
Trigger: CGGGATGGCCAGCTGCTGCCAAGCTCCAATTACAGC...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTCACCTCCAGATAGCTaGCAGAGGGGGTGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: FHTEWLLSSCGHGGPARFSPPDS*QRGCCR
Trigger: TCTACAACACCCCCTCTGCCAGCTATCTGGAGGTGA...GAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GGGGCCAGGGCTGTGTGTTCTGGGATCCTCCATTTCCATCCCCAGGAGCTGAGAATCATTCTCAGAGTCTaGGGTCACCTCCAGATAGCT +
Preference number: 4 (lower is better)
Translates to: GARAVCSGILHFHPQELRIILRV*GHLQIA
Trigger: AGCTATCTGGAGGTGACCCCAGACTCTGAGAATGAT...TCTCAGCTCCTGGGGATGGAAATGGAGGATCCCAGAACACACAGCCCTGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CCTGGTGTGAAGCGCCATCTGGGACTCCAGCGGGGAGAGTTTTGTGGCTGGGTTATCATTCTCAGAGTCTaGGGTCACCTCCAGATAGCT +
Preference number: 4 (lower is better)
Translates to: PGVKRHLGLQRGEFCGWVIILRV*GHLQIA
Trigger: AGCTATCTGGAGGTGACCCCAGACTCTGAGAATGAT...AACCCAGCCACAAAACTCTCCCCGCTGGAGTCCCAGATGGCGCTTCACACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTCCACCTGGTCGATaGATGGTGAAGAGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAAPPGR*MVKRGC
Trigger: ACACCCCCTCTTCACCATCCATCGACCAGGTGGAGC...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GGGCATTCAGGAAGCACTGACAGGTTGGCTCGGCCCCAATTTATTAACCCTCCTGCTCCACCTGGTCGATaGATGGTGAAGAGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: GHSGSTDRLARPQFINPPAPPGR*MVKRGC
Trigger: ACACCCCCTCTTCACCATCCATCGACCAGGTGGAGC...AGGAGGGTTAATAAATTGGGGCCGAGCCAACCTGTCAGTGCTTCCTGAATGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp TCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTGAGTATGGCTCCACCTaGTCGATGGATGGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: STQNGCSAAVAMVVLPGSEYGST*SMDGEE
Trigger: CTCTTCACCATCCATCGACCAGGTGGAGCCATACTC...AGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTGGCTGTGCTGGAGTATaGCTCCACCTGGTCGATGGA +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAGCAGV*LHLVDG
Trigger: TCCATCGACCAGGTGGAGCCATACTCCAGCACAGCC...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTGCACCTGGGCTGTGCTaGAGTATGGCTCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWAAPGLC*SMAPPG
Trigger: ACCAGGTGGAGCCATACTCCAGCACAGCCCAGGTGC...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp CCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAGCACCTGGGCTGTGCTaGAGTATGGCTCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: PWWSCQVLPKGALIFFIGAPGLC*SMAPPG
Trigger: ACCAGGTGGAGCCATACTCCAGCACAGCCCAGGTGC...TCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp ACCTTCTCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCGATGCCCTCCATGCTaGCTTCCTTGGCATCATACC +
Preference number: 4 (lower is better)
Translates to: TFSSTQNGCSAAVAMVVLRCPPC*LPWHHT
Trigger: GGTATGATGCCAAGGAAGCCAGCATGGAGGGCATCG...CAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGAGAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGGGTTCCCCTTGGACTaGCTGCGTCTTGAACTCGGA +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAGFPLD*LRLELG
Trigger: TCCGAGTTCAAGACGCAGCCAGTCCAAGGGGAACCC...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316851.12
ENST00000531044.5
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCACTGGGTTCCCCTTaGACTGGCTGCGTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAALGSP*TGCVLN
Trigger: GTTCAAGACGCAGCCAGTCCAAGGGGAACCCAGTGC...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316851.12
ENST00000531044.5
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTCGGGAGCCTGATCTCTaGTTTCCACTCGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAREPDL*FPLGGE
Trigger: CTCTCCTCCGAGTGGAAACCAGAGATCAGGCTCCCG...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGACTTCAGCATGACGTaGTCACTGCCAGACGGGAGC +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEADFSMT*SLPDGS
Trigger: GCTCCCGTCTGGCAGTGACCACGTCATGCTGAAGTC...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTGACTTCAGCATGACGTaGTCACTGCCAGACGGGAGC +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAADFSMT*SLPDGS
Trigger: GCTCCCGTCTGGCAGTGACCACGTCATGCTGAAGTC...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTGGGATGGCTGTGGGCTaGGCCGAGGTCCTGAACACA +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLGMAVG*AEVLNT
Trigger: TGTGTTCAGGACCTCGGCCCAGCCCACAGCCATCCC...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000401611.6
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTGGGGCTGCCGTTGGCTaGGATGGCTGTGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPGAAVG*DGCGLG
Trigger: GCCCAGCCCACAGCCATCCCAGCCAACGGCAGCCCC...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGTGGCGTGGTCTCGTTaGGCTCTGTGTGTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAVAWSR*ALCVSL
Trigger: GAGGGAAACACACAGAGCCCAACGAGACCACGCCAC...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTGTGGCGTGGTCTCGTTaGGCTCTGTGTGTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAVAWSR*ALCVSL
Trigger: GAGGGAAACACACAGAGCCCAACGAGACCACGCCAC...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTTGTCTCCTGGCACTCTaGCTTTGCTTCTACGGGGCC +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAACLLAL*LCFYGA
Trigger: GGCCCCGTAGAAGCAAAGCCAGAGTGCCAGGAGACA...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GGGGCCAGGGCTGTGTGTTCTGGGATCCTCCATTTCCATCCCCAGGAGCTGAGATTCGTTTCTGTCTCCTaGCACTCTGGCTTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GARAVCSGILHFHPQELRFVSVS*HSGFAS
Trigger: AGAAGCAAAGCCAGAGTGCCAGGAGACAGAAACGAA...TCTCAGCTCCTGGGGATGGAAATGGAGGATCCCAGAACACACAGCCCTGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTGACTTCGGCTGGCGCTaGCTTCGTTTCTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAADFGWR*LRFCLL
Trigger: CAGGAGACAGAAACGAAGCCAGCGCCAGCCGAAGTC...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTGTGTGTCTGTGGTGTTaGAAATGCTCTGGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAAVCLWC*KCSGEA
Trigger: AGCTTCACCAGAGCATTTCCAACACCACAGACACAC...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAGACACCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTGCCCCTCACTGCTaGGCCCTCCCGGTCTCAGAC +
Preference number: 4 (lower is better)
Translates to: QTPRLSHSTVCSKISLHVPAPHC*ALPVSD
Trigger: GTCTGAGACCGGGAGGGCCCAGCAGTGAGGGGCAGG...AACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGGTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTGCCTCCCAAGGTTGCTaGGATGGCTGTGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFASQGC*DGCGLG
Trigger: GCCCAGCCCACAGCCATCCCAGCAACCTTGGGAGGC...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp ACGAGGACTGAAAGCACATCCCAGAACGTTCATCAGCCCCAGAAAATATCCAACGCCTCCCAAGGTTGCTaGGATGGCTGTGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TRTESTSQNVHQPQKISNASQGC*DGCGLG
Trigger: GCCCAGCCCACAGCCATCCCAGCAACCTTGGGAGGC...GTTGGATATTTTCTGGGGCTGATGAACGTTCTGGGATGTGCTTTCAGTCCTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp ACCTTCTCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGAGGAGGGCTATGGACTaGCTGCGTCTTGAACTCGGA +
Preference number: 4 (lower is better)
Translates to: TFSSTQNGCSAAVAMVVLRRAMD*LRLELG
Trigger: TCCGAGTTCAAGACGCAGCCAGTCCATAGCCCTCCT...CAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGAGAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTATCTGGTGGAGACAATaGAACAGGGGTAGACGAGCT +
Preference number: 4 (lower is better)
Translates to: AAVAMVVLPGSSKGGTDLIWWRQ*NRGRRA
Trigger: AGCTCGTCTACCCCTGTTCCATTGTCTCCACCAGAT...AAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCAAGGCCAAGTTGTATCTaGTGGAGACAATGGAACAGG +
Preference number: 4 (lower is better)
Translates to: VAQQLWPWWSCQVLPKGARPSCI*WRQWNR
Trigger: CCTGTTCCATTGTCTCCACCAGATACAACTTGGCCT...TGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGTTGCTCAGCAGCTGTaGCCATGGTGGTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: WPWWSCQVLPKGALIFFIVAQQL*PWWSCQ
Trigger: CTGGCAGGACCACCATGGCCACAGCTGCTGAGCAAC...TATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCCTCTTCCACACAGAATaGTTGCTCAGCAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: FHTEWLLSSCGHGGPARFLFHTE*LLSSCG
Trigger: GCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGAG...GAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp CAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTCTTGTTGGCACATCATaGCTTGGCCCCGTTCACAGA +
Preference number: 4 (lower is better)
Translates to: QLWPWWSCQVLPKGALIFLVGTS*LGPVHR
Trigger: TCTGTGAACGGGGCCAAGCCATGATGTGCCAACAAG...AAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp CAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTACCCATTTCCTCTCCTaGGTGAACTCCCAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: QLWPWWSCQVLPKGALIFTHFLS*VNSQAA
Trigger: TGCTGCTTGGGAGTTCACCCAGGAGAGGAAATGGGT...AAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp AGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGTCTCCCACACTGACCTaGGATCCTTATGCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: RMVAQQLWPWWSCQVLPKSPTLT*DPYALP
Trigger: GGGCAGAGCATAAGGATCCCAGGTCAGTGTGGGAGA...CTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp GTGGATGCTTCCAACCTGTCCTGTAGACTGATGCTCAAAGCCATTCTGTGGGTCAGTGTCCGTGGGGAGTaGGTATGCGCTAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: VDASNLSCRLMLKAILWVSVRGE*VCASAA
Trigger: GGCAGCACTAGCGCATACCCACTCCCCACGGACACT...GACCCACAGAATGGCTTTGAGCATCAGTCTACAGGACAGGTTGGAAGCATCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp CCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAAGCAAAGGGGCCCCATaGTGTGTGGAGCATGGGCAG +
Preference number: 4 (lower is better)
Translates to: PWWSCQVLPKGALIFFIGSKGAP*CVEHGQ
Trigger: CTGCCCATGCTCCACACACCATGGGGCCCCTTTGCT...TCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp AGCTCTCCCACACTGACCTGGGATCCTTATGCTCTGCCCTGTGCCCAAAAACCAATCATTCCACACCACTaGGATCCGCTGCTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: SSPTLTWDPYALPCAQKPIIPHH*DPLLVW
Trigger: CCAAACCAGCAGCGGATCTCAGTGGTGTGGAATGAT...TGGTTTTTGGGCACAGGGCAGAGCATAAGGATCCCAGGTCAGTGTGGGAGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp AGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGATCATTCCACACCACTaGGATCCGCTGCTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: RMVAQQLWPWWSCQVLPKIIPHH*DPLLVW
Trigger: CCAAACCAGCAGCGGATCTCAGTGGTGTGGAATGAT...CTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp GGTGTGGCAAAGCCATCGACATTACAAGATGAAGAACTGAGTCCACTGAACAGCGTTGACGGTGGCCTCTaGCTCACTGCCATCCTCGCC +
Preference number: 4 (lower is better)
Translates to: GVAKPSTLQDEELSPLNSVDGGL*LTAILA
Trigger: GGCGAGGATGGCAGTGAGTCAGAGGCCACCGTCAAC...GCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCCATCCCGAAACCATaGGATCGTGGCACTGGGATA +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAAIPKP*DRGTGI
Trigger: TATCCCAGTGCCACGATCTCATGGTTTCGGGATGGC...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGCTGCTTGAACAAGGATaGATTCCAAGGACTCCTGCC +
Preference number: 4 (lower is better)
Translates to: EWLLSSCGHGGPARFFQRLLEQG*IPRTPA
Trigger: GGCAGGAGTCCTTGGAATTCATCCTTGTTCAAGCAG...CCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp CCCACACTGACCTGGGATCCTTATGCTCTGCCCTGTGCCCAAAAACCATGCCTGCTGCTTGAACAAGGATaGATTCCAAGGACTCCTGCC +
Preference number: 4 (lower is better)
Translates to: PTLTWDPYALPCAQKPCLLLEQG*IPRTPA
Trigger: GGCAGGAGTCCTTGGAATTCATCCTTGTTCAAGCAG...CAGGCATGGTTTTTGGGCACAGGGCAGAGCATAAGGATCCCAGGTCAGTGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp CAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTCTGCTTGAACAAGGATaGATTCCAAGGACTCCTGCC +
Preference number: 4 (lower is better)
Translates to: QLWPWWSCQVLPKGALIFLLEQG*IPRTPA
Trigger: GGCAGGAGTCCTTGGAATTCATCCTTGTTCAAGCAG...AAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp AATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGAGGGGGTGTCTGCTTaGACAAGGATGAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: NGCSAAVAMVVLPGSSKGEGVSA*TRMNSK
Trigger: CTTGGAATTCATCCTTGTTCAAGCAGACACCCCCTC...CCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTCTGGTCGATGGATGGTaGAGAGGGGGTGTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWALVDGW*RGGVCL
Trigger: CAAGCAGACACCCCCTCTTCACCATCCATCGACCAG...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTTCAGGCCCACGATGGTaGCGATGCCCTCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFSGPRW*RCPPCW
Trigger: CCAGCATGGAGGGCATCGTCACCATCGTGGGCCTGA...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTCCAGCCCTTTGCCATTaGGCGCCGCCAGCCTTACGG +
Preference number: 4 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSPALCH*APPALR
Trigger: CCGTAAGGCTGGCGGCGCTCAATGGCAAAGGGCTGG...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTACTCGGAGGCCGCGCTaGTCTCACCCAGCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSTRRPR*SHPALC
Trigger: GCAAAGGGCTGGGTGAGATCAGCGCGGCCTCCGAGT...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTGCCAGACGGGAGCCTaGTCTCTGGTTTCCACTCGG +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLCQTGA*SLVSTR
Trigger: CCGAGTGGAAACCAGAGATCAGGCTCCCGTCTGGCA...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000401611.6
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTCCAGGGACTTCAGCATaGCGTGGTCACTGCCAGACG +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLPGTSA*RGHCQT
Trigger: CGTCTGGCAGTGACCACGTCATGCTGAAGTCCCTGG...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000401611.6
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp TCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATGTCCTGAACACAAAATaGGCCGCCTTGGATTTTCCT +
Preference number: 4 (lower is better)
Translates to: SAAVAMVVLPGSSKGGTDVLNTK*AALDFP
Trigger: AGGAAAATCCAAGGCGGCTCATTTTGTGTTCAGGAC...ATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp GCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTGTCCTGAACACAAAATaGGCCGCCTTGGATTTTCCT +
Preference number: 4 (lower is better)
Translates to: AAVAMVVLPGSSKGGTDLVLNTK*AALDFP
Trigger: AGGAAAATCCAAGGCGGCTCATTTTGTGTTCAGGAC...AAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCCCCGGTGCTCAGGCCTaGGGTGGGGCTGCCGTTGGC +
Preference number: 4 (lower is better)
Translates to: VVSMFHLVKSFITREKAPPGAQA*GGAAVG
Trigger: GCCAACGGCAGCCCCACCTCAGGCCTGAGCACCGGG...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
54% GC, longest homopolymer 8 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TGGCGGCTAATCAGAAAGTGGTCTAACCCCCAAAGAAACACAAAAATAACCAAACCCGGTGCTCAGGCCTaGGGTGGGGCTGCCGTTGGC +
Preference number: 4 (lower is better)
Translates to: WRLIRKWSNPQRNTKITKPGAQA*GGAAVG
Trigger: GCCAACGGCAGCCCCACCTCAGGCCTGAGCACCGGG...TTTGGTTATTTTTGTGTTTCTTTGGGGGTTAGACCACTTTCTGATTAGCCGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCGGGGCAAACTCCTTATaGAGTGGCACAAAAGTATCT +
Preference number: 4 (lower is better)
Translates to: QQLWPWWSCQVLPKGALIGANSL*SGTKVS
Trigger: AGATACTTTTGTGCCACTTCATAAGGAGTTTGCCCC...GATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp GGCTGGGGCATTCAGGAAGCACTGACAGGTTGGCTCGGCCCCAATTTATTAACCAGCAAAACGCTCATGTaGATCAGTGCGGTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GWGIQEALTGWLGPNLLTSKTLM*ISAVWL
Trigger: GAGCCAGACCGCACTGATTCACATGAGCGTTTTGCT...GGTTAATAAATTGGGGCCGAGCCAACCTGTCAGTGCTTCCTGAATGCCCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp AGTTTTGTGGCTGGGTTGAGAGGCACTACCCTGCCTGAGCTACTGTGCAGCATGAGCAAAACGCTCATGTaGATCAGTGCGGTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SFVAGLRGTTLPELLCSMSKTLM*ISAVWL
Trigger: GAGCCAGACCGCACTGATTCACATGAGCGTTTTGCT...CATGCTGCACAGTAGCTCAGGCAGGGTAGTGCCTCTCAACCCAGCCACAAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp GCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTCCCAAGCACACACACTaGTATTACCAAGCAGGATTC +
Preference number: 4 (lower is better)
Translates to: AAVAMVVLPGSSKGGTDLPKHTH*YYQAGF
Trigger: GAATCCTGCTTGGTAATATCAGTGTGTGTGCTTGGG...AAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp AGTTGCCCATCATGTCAGCAAAACGCTCATGTGAATCAGTGCGGTCTGGCTCTTGGCCCGGGTTCGTTTTaGTGGAACTGGGATGGGAGC +
Preference number: 4 (lower is better)
Translates to: SCPSCQQNAHVNQCGLALGPGSF*WNWDGS
Trigger: GCTCCCATCCCAGTTCCATCAAAACGAACCCGGGCC...AAGAGCCAGACCGCACTGATTCACATGAGCGTTTTGCTGACATGATGGGCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621518.4
CDS-3UTR GCA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTCAGCGGCAGCCGAGCTaGGTTCACGCGCTGATCGGA +
Preference number: 4 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSQRQPS*VHALIG
Trigger: TCCGATCAGCGCGTGAACGCAGCTCGGCTGCCGCTG...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTCTAGGGGCAGACAATTaGCAGGCTGAGTATGATTAT +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAALGADN*QAEYDY
Trigger: ATAATCATACTCAGCCTGGCAATTGTCTGCCCCTAG...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTTGGATGGTCGCATCCTaGTCGCCAGCCTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAWMVAS*SPALFS
Trigger: TGAGAACAAGGCTGGCGAGCAGGATGCGACCATCCA...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTTGGATGGTCGCATCCTaGTCGCCAGCCTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAWMVAS*SPALFS
Trigger: TGAGAACAAGGCTGGCGAGCAGGATGCGACCATCCA...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ACCTTCTCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCATCAGTGTACTGGATaGTCTTCAGGGTCAGCGACG +
Preference number: 4 (lower is better)
Translates to: TFSSTQNGCSAAVAMVVLHQCTG*SSGSAT
Trigger: CGTCGCTGACCCTGAAGAGCATCCAGTACACTGATG...CAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGAGAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTTGGTGTTGCTGGCGGTaGAGATGTACTCTCCGGCAT +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAWCCWR*RCTLRH
Trigger: ATGCCGGAGAGTACATCTGCACCGCCAGCAACACCA...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTCCTGGCCGATGGTGTTaGTGGCGGTGCAGATGTACT +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWAPGRWC*WRCRCT
Trigger: AGTACATCTGCACCGCCAGCAACACCATCGGCCAGG...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp GTGGATGCTTCCAACCTGTCCTGTAGACTGATGCTCAAAGCCATTCTGTGGGTCCCTGGCCGATGGTGTTaGTGGCGGTGCAGATGTACT +
Preference number: 4 (lower is better)
Translates to: VDASNLSCRLMLKAILWVPGRWC*WRCRCT
Trigger: AGTACATCTGCACCGCCAGCAACACCATCGGCCAGG...GACCCACAGAATGGCTTTGAGCATCAGTCTACAGGACAGGTTGGAAGCATCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTAGCTTTGGGGCATATTaGACTTCAAGGTACATGGAC +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAASFGAY*TSRYMD
Trigger: GTCCATGTACCTTGAAGTGCAATATGCCCCAAAGCT...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCAAGCTTTGGGGCATATTaGACTTCAAGGTACATGGAC +
Preference number: 4 (lower is better)
Translates to: VAQQLWPWWSCQVLPKGASFGAY*TSRYMD
Trigger: GTCCATGTACCTTGAAGTGCAATATGCCCCAAAGCT...TGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp ACCTTCTCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGAGGACTCCTGCCCAATaGGGTTCACTGCAGTACAGT +
Preference number: 4 (lower is better)
Translates to: TFSSTQNGCSAAVAMVVLRTPAQ*GSLQYS
Trigger: ACTGTACTGCAGTGAACCGCATTGGGCAGGAGTCCT...CAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGAGAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp TCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTAATTCCAAGGACTCCTaGCCAATGCGGTTCACTGCA +
Preference number: 4 (lower is better)
Translates to: SSTQNGCSAAVAMVVLPGNSKDS*PMRFTA
Trigger: TGCAGTGAACCGCATTGGGCAGGAGTCCTTGGAATT...ACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTACTGCACCTGGGCTGTaGTGGAGTATGGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWATAPGL*WSMAPP
Trigger: AGGTGGAGCCATACTCCAGCACAGCCCAGGTGCAGT...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp GTCCTCTCCACACTTAGGACGAGATCTCCAAAGGGTCCCTTCAGAAAGATGGACCCCTTCGAGCTTAGGTaGACTGGGTTCCCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: VLSTLRTRSPKGPFRKMDPFELR*TGFPLD
Trigger: GTCCAAGGGGAACCCAGTGCACCTAAGCTCGAAGGG...GTCCATCTTTCTGAAGGGACCCTTTGGAGATCTCGTCCTAAGTGTGGAGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621128.4
CDS-3UTR GCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTCCATCCTCTCCCATCTaGCCTTCGAGCTTAGGTGCA +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAPSSPI*PSSLGA
Trigger: TGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGG...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CTTCAGCATGACGTGGTCACTGCCAGACGGGAGCCTGATCTCTGGTTTCCACTCGAGCCGCCGTCATCCTaGTTGATCAGGTTCACTTTA +
Preference number: 4 (lower is better)
Translates to: LQHDVVTARREPDLWFPLEPPSS*LIRFTL
Trigger: TAAAGTGAACCTGATCAAGCAGGATGACGGCGGCTC...GAGTGGAAACCAGAGATCAGGCTCCCGTCTGGCAGTGACCACGTCATGCTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR GCA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTGGCCTGAGGTGGGGCTaGCGTTGGCTGGGATGGCTG +
Preference number: 4 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFGLRWG*RWLGWL
Trigger: CAGCCATCCCAGCCAACGGCAGCCCCACCTCAGGCC...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GGGGCCAGGGCTGTGTGTTCTGGGATCCTCCATTTCCATCCCCAGGAGCTGAGATCTCTTCACCCATCATaGTTTGCTCTCGTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: GARAVCSGILHFHPQELRSLHPS*FALVLL
Trigger: AAGGAGAACGAGAGCAAAGCATGATGGGTGAAGAGA...TCTCAGCTCCTGGGGATGGAAATGGAGGATCCCAGAACACACAGCCCTGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCAGGGTCCAGTGGCCCTaGTCGTCACACTTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSRVQWP*SSHLSA
Trigger: AGCACTCAAGTGTGACGAGCAGGGCCACTGGACCCT...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTCTACGCACCACCATGTaGCCATCCAGAGTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: STQNGCSAAVAMVVLPGSLRTTM*PSRVFS
Trigger: AGAAAAGACTCTGGATGGGCACATGGTGGTGCGTAG...AGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTCCCTTCGAGCTTAGGTaGACTGGGTTCCCGGACTGG +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLPFELR*TGFPDW
Trigger: CCAGTCCGGGAACCCAGTGCACCTAAGCTCGAAGGG...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000401611.6
CDS-3UTR GCA 90 bp CCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGATGGCCATGGTGGTCCTaGCAGGTTCTTCCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: PWWSCQVLPKGALIFFIGWPWWS*QVLPKG
Trigger: CCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCA...TCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTGGCCATGGTGGTCCTaGCAGGTTCTTCCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWAWPWWS*QVLPKG
Trigger: CCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCA...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp GCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTAGGGGTGACTTCAGTTaGCCATCATGTCAGCAAAAC +
Preference number: 4 (lower is better)
Translates to: AAVAMVVLPGSSKGGTDLRGDFS*PSCQQN
Trigger: GTTTTGCTGACATGATGGGCAACTGAAGTCACCCCT...AAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp AGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGCAACATAGGTGGCTTTaGCCCTCAGACCACAGCATG +
Preference number: 4 (lower is better)
Translates to: RMVAQQLWPWWSCQVLPKQHRWL*PSDHSM
Trigger: CATGCTGTGGTCTGAGGGGCAAAGCCACCTATGTTG...CTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp ACCTTCTCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGGACCTGGGATCCTTATaGTCTGCCCTGTGCCCAAAA +
Preference number: 4 (lower is better)
Translates to: TFSSTQNGCSAAVAMVVLDLGSL*SALCPK
Trigger: TTTTGGGCACAGGGCAGAGCATAAGGATCCCAGGTC...CAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGAGAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTACGCTGATCTCCCCCTaGCTGGGAACAATATCCACC +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAATLISP*LGTIST
Trigger: GGTGGATATTGTTCCCAGCCAGGGGGAGATCAGCGT...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCAGCATCTCCTGCCACTTaGCATAAGAAGAATTTGGAC +
Preference number: 4 (lower is better)
Translates to: VAQQLWPWWSCQVLPKGAASPAT*HKKNLD
Trigger: GTCCAAATTCTTCTTATGCCAAGTGGCAGGAGATGC...TGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTCTCCCGGAACTCCTGTaGGGTTGGCGCATTCTTGAA +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEALPELL*GWRILE
Trigger: TTCAAGAATGCGCCAACCCCACAGGAGTTCCGGGAG...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTCTCCCGGAACTCCTGTaGGGTTGGCGCATTCTTGAA +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAALPELL*GWRILE
Trigger: TTCAAGAATGCGCCAACCCCACAGGAGTTCCGGGAG...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTCCAGATGATGGTTGGTaGGAGGGAGCTGACCACATC +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAPDDGW*EGADHI
Trigger: GATGTGGTCAGCTCCCTCCCACCAACCATCATCTGG...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTCCAGATGATGGTTGGTaGGAGGGAGCTGACCACATC +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAPDDGW*EGADHI
Trigger: GATGTGGTCAGCTCCCTCCCACCAACCATCATCTGG...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GGGCATTCAGGAAGCACTGACAGGTTGGCTCGGCCCCAATTTATTAACCCTCCTCCAGATGATGGTTGGTaGGAGGGAGCTGACCACATC +
Preference number: 4 (lower is better)
Translates to: GHSGSTDRLARPQFINPPPDDGW*EGADHI
Trigger: GATGTGGTCAGCTCCCTCCCACCAACCATCATCTGG...AGGAGGGTTAATAAATTGGGGCCGAGCCAACCTGTCAGTGCTTCCTGAATGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGGCCGAGGTTGGCGGTaGCATTCACAATATTCTGCC +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAGRGWR*HSQYSA
Trigger: GGCAGAATATTGTGAATGCCACCGCCAACCTCGGCC...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTGGCCGAGGTTGGCGGTaGCATTCACAATATTCTGCC +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAGRGWR*HSQYSA
Trigger: GGCAGAATATTGTGAATGCCACCGCCAACCTCGGCC...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTCGGACTGGCCGAGGTTaGCGGTGGCATTCACAATAT +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEARTGRG*RWHSQY
Trigger: ATATTGTGAATGCCACCGCCAACCTCGGCCAGTCCG...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GGGCATTCAGGAAGCACTGACAGGTTGGCTCGGCCCCAATTTATTAACCCTCCTCGGACTGGCCGAGGTTaGCGGTGGCATTCACAATAT +
Preference number: 4 (lower is better)
Translates to: GHSGSTDRLARPQFINPPRTGRG*RWHSQY
Trigger: ATATTGTGAATGCCACCGCCAACCTCGGCCAGTCCG...AGGAGGGTTAATAAATTGGGGCCGAGCCAACCTGTCAGTGCTTCCTGAATGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTCCTTTGTCCAGCTCATaGTGGGCTCTGGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAPLSSS*WALGSL
Trigger: AAGGCTTCCCAGAGCCCACCATGAGCTGGACAAAGG...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTTTTTTGATGGTCAGCTaGGAACTATCGTCGCTGAAG +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAAFLMVS*ELSSLK
Trigger: CTTCAGCGACGATAGTTCCCAGCTGACCATCAAAAA...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTGATGGTCAGCTaGGAACTATCGTCGCTGAAG +
Preference number: 4 (lower is better)
Translates to: QQLWPWWSCQVLPKGALIFLMVS*ELSSLK
Trigger: CTTCAGCGACGATAGTTCCCAGCTGACCATCAAAAA...GATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCGGCCGATGGTGTTGCTaGCGGTGCAGATGTACTCTC +
Preference number: 4 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSGRWCC*RCRCTL
Trigger: GAGAGTACATCTGCACCGCCAGCAACACCATCGGCC...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGATGGACTGGGAGTCCTaGCCGATGGTGTTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: NKREGPRSTECWVGMLMEMDWES*PMVLLA
Trigger: CGCCAGCAACACCATCGGCCAGGACTCCCAGTCCAT...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTTCAAGGTACATGGACTaGGAGTCCTGGCCGATGGTG +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAASRYMD*ESWPMV
Trigger: CACCATCGGCCAGGACTCCCAGTCCATGTACCTTGA...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGCAGGTGATGTTCACCTaGTTCCCCTCCCAAGTGTAC +
Preference number: 4 (lower is better)
Translates to: RMVAQQLWPWWSCQVLPKQVMFT*FPSQVY
Trigger: GTACACTTGGGAGGGGAACCAGGTGAACATCACCTG...CTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GGGGCCAGGGCTGTGTGTTCTGGGATCCTCCATTTCCATCCCCAGGAGCTGAGAGAAACCATGAGATCGTaGCACTGGGATAGGCAAATA +
Preference number: 4 (lower is better)
Translates to: GARAVCSGILHFHPQELRETMRS*HWDRQI
Trigger: TATTTGCCTATCCCAGTGCCACGATCTCATGGTTTC...TCTCAGCTCCTGGGGATGGAAATGGAGGATCCCAGAACACACAGCCCTGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCGAGCTTGGCAGCAGCTaGCCATCCCGAAACCATGAG +
Preference number: 4 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSELGSS*PSRNHE
Trigger: CTCATGGTTTCGGGATGGCCAGCTGCTGCCAAGCTC...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTGCTGTAATTGGAGCTTaGCAGCAGCTGGCCATCCCG +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWAAVIGA*QQLAIP
Trigger: CGGGATGGCCAGCTGCTGCCAAGCTCCAATTACAGC...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp AGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGTCACCTCCAGATAGCTaGCAGAGGGGGTGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: RMVAQQLWPWWSCQVLPKSPPDS*QRGCCR
Trigger: TCTACAACACCCCCTCTGCCAGCTATCTGGAGGTGA...CTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTATCATTCTCAGAGTCTaGGGTCACCTCCAGATAGCT +
Preference number: 4 (lower is better)
Translates to: AAVAMVVLPGSSKGGTDLIILRV*GHLQIA
Trigger: AGCTATCTGGAGGTGACCCCAGACTCTGAGAATGAT...AAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTGGCTGTGCTGGAGTATaGCTCCACCTGGTCGATGGA +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWAGCAGV*LHLVDG
Trigger: TCCATCGACCAGGTGGAGCCATACTCCAGCACAGCC...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TGGATTTTCCTTGCTGGTTCTCAGCCACCACGTAGACCTCATACTCAGCATTCCGCACCTGGGCTGTGCTaGAGTATGGCTCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: WIFLAGSQPPRRPHTQHSAPGLC*SMAPPG
Trigger: ACCAGGTGGAGCCATACTCCAGCACAGCCCAGGTGC...GGAATGCTGAGTATGAGGTCTACGTGGTGGCTGAGAACCAGCAAGGAAAATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR CCA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGGCACCTGGGCTGTGCTaGAGTATGGCTCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: NKREGPRSTECWVGMLMEAPGLC*SMAPPG
Trigger: ACCAGGTGGAGCCATACTCCAGCACAGCCCAGGTGC...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTTGGGCACCCCACCTGTaGCCTCTGGTTCATCAAACT +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAWAPHL*PLVHQT
Trigger: AGTTTGATGAACCAGAGGCCACAGGTGGGGTGCCCA...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTCGATGCCCTCCATGCTaGCTTCCTTGGCATCATACC +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAARCPPC*LPWHHT
Trigger: GGTATGATGCCAAGGAAGCCAGCATGGAGGGCATCG...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GGGCATTCAGGAAGCACTGACAGGTTGGCTCGGCCCCAATTTATTAACCCTCCTCGATGCCCTCCATGCTaGCTTCCTTGGCATCATACC +
Preference number: 4 (lower is better)
Translates to: GHSGSTDRLARPQFINPPRCPPC*LPWHHT
Trigger: GGTATGATGCCAAGGAAGCCAGCATGGAGGGCATCG...AGGAGGGTTAATAAATTGGGGCCGAGCCAACCTGTCAGTGCTTCCTGAATGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp TTCCTTGCTGGTTCTCAGCCACCACGTAGACCTCATACTCAGCATTCCAGTCCACGGGAGCCTGATCTCTaGTTTCCACTCGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: FLAGSQPPRRPHTQHSSPREPDL*FPLGGE
Trigger: CTCTCCTCCGAGTGGAAACCAGAGATCAGGCTCCCG...TGGACTGGAATGCTGAGTATGAGGTCTACGTGGTGGCTGAGAACCAGCAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR CCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTGACTTCAGCATGACGTaGTCACTGCCAGACGGGAGC +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWADFSMT*SLPDGS
Trigger: GCTCCCGTCTGGCAGTGACCACGTCATGCTGAAGTC...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000401611.6
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTGGGATGGCTGTGGGCTaGGCCGAGGTCCTGAACACA +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFGMAVG*AEVLNT
Trigger: TGTGTTCAGGACCTCGGCCCAGCCCACAGCCATCCC...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000401611.6
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp CAGACACCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTTGCTCAGGCCTGAGGTaGGGCTGCCGTTGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: QTPRLSHSTVCSKISLHVCSGLR*GCRWLG
Trigger: TCCCAGCCAACGGCAGCCCCACCTCAGGCCTGAGCA...AACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGGTGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTTGCTCAGGCCTGAGGTaGGGCTGCCGTTGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSCSGLR*GCRWLG
Trigger: TCCCAGCCAACGGCAGCCCCACCTCAGGCCTGAGCA...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGGCTCCGTCAGTGGCGTaGTCTCGTTGGGCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: NKREGPRSTECWVGMLMEAPSVA*SRWALC
Trigger: ACACAGAGCCCAACGAGACCACGCCACTGACGGAGC...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTCGTCTTGACTTCGGCTaGCGCTGGCTTCGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAARLDFG*RWLRFC
Trigger: ACAGAAACGAAGCCAGCGCCAGCCGAAGTCAAGACG...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATCCTGCCCCTCACTGCTaGGCCCTCCCGGTCTCAGAC +
Preference number: 4 (lower is better)
Translates to: PGSHILLCALRSLFMFLYPAPHC*ALPVSD
Trigger: GTCTGAGACCGGGAGGGCCCAGCAGTGAGGGGCAGG...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTCCTGCCCCTCACTGCTaGGCCCTCCCGGTCTCAGAC +
Preference number: 4 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPPAPHC*ALPVSD
Trigger: GTCTGAGACCGGGAGGGCCCAGCAGTGAGGGGCAGG...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTCTTCTCGGTCTTTGCTaGCGCAGGCGAAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAALLGLC*RRRNRA
Trigger: AGCTCTGTTTCGCCTGCGCCAGCAAAGACCGAGAAG...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR CCA 90 bp AATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGATCTGGTGGAGACAATaGAACAGGGGTAGACGAGCT +
Preference number: 4 (lower is better)
Translates to: NGCSAAVAMVVLPGSSKGIWWRQ*NRGRRA
Trigger: AGCTCGTCTACCCCTGTTCCATTGTCTCCACCAGAT...CCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCCAAGTTGTATCTGGTaGAGACAATGGAACAGGGGT +
Preference number: 4 (lower is better)
Translates to: SAAVAMVVLPGSSKGGTDPSCIW*RQWNRG
Trigger: ACCCCTGTTCCATTGTCTCCACCAGATACAACTTGG...ATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCAGCTGTGGCCATGGTaGTCCTGCCAGGTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: WSCQVLPKGALIFFIGTGQLWPW*SCQVLP
Trigger: TGGAAGAACCTGGCAGGACCACCATGGCCACAGCTG...CCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp CCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGACAGCAGCTGTGGCCATaGTGGTCCTGCCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: PWWSCQVLPKGALIFFIGQQLWP*WSCQVL
Trigger: AAGAACCTGGCAGGACCACCATGGCCACAGCTGCTG...TCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGTTGCTCAGCAGCTGTaGCCATGGTGGTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: WWSCQVLPKGALIFFIGTVAQQL*PWWSCQ
Trigger: CTGGCAGGACCACCATGGCCACAGCTGCTGAGCAAC...AGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp AAAGCCATTCTGTGGGTCACTGCTGAACCACGGCCCCACTCTGTGCTGATCTGCGGGAGTCACCCCGATTaGGAGACAAACACCTTTCAA +
Preference number: 4 (lower is better)
Translates to: KAILWVTAEPRPHSVLICGSHPD*ETNTFQ
Trigger: TTGAAAGGTGTTTGTCTCCCAATCGGGGTGACTCCC...GCAGATCAGCACAGAGTGGGGCCGTGGTTCAGCAGTGACCCACAGAATGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp TGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTTGGGCAGTCTGGGAGTaGCCTGTCCCTCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: WWSCQVLPKGALIFFIGTWAVWE*PVPLLL
Trigger: GAGAAGGAGAGGGACAGGCCACTCCCAGACTGCCCA...AGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp AGGGAGGACAAGGAGCACAGAGTTAGAATGAGGGGAATGTGTGGTGATTTTAACCTGGGCTGGGCAGTCTaGGAGTGGCCTGTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: REDKEHRVRMRGMCGDFNLGWAV*EWPVPL
Trigger: GAGAGGGACAGGCCACTCCCAGACTGCCCAGCCCAG...GTTAAAATCACCACACATTCCCCTCATTCTAACTCTGTGCTCCTTGTCCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp TGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTTTAACCCTCCTGGGCTaGGCAGTCTGGGAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: WWSCQVLPKGALIFFIGTLTLLG*AVWEWP
Trigger: AGGCCACTCCCAGACTGCCCAGCCCAGGAGGGTTAA...AGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp CGCCAACATAGGTGGCTTTGCCCCTCAGACCACAGCATGGGATCATTTGGAATCATGGTGTGTGGAGCATaGGCAGCACAACTACAGGGC +
Preference number: 4 (lower is better)
Translates to: RQHRWLCPSDHSMGSFGIMVCGA*AAQLQG
Trigger: GCCCTGTAGTTGTGCTGCCCATGCTCCACACACCAT...GATTCCAAATGATCCCATGCTGTGGTCTGAGGGGCAAAGCCACCTATGTTGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp AGCACACACACTGATATTACCAAGCAGGATTCAGCCCTGAGTCTCCACAAGGGAAGCAAAGGGGCCCCATaGTGTGTGGAGCATGGGCAG +
Preference number: 4 (lower is better)
Translates to: STHTDITKQDSALSLHKGSKGAP*CVEHGQ
Trigger: CTGCCCATGCTCCACACACCATGGGGCCCCTTTGCT...TCCCTTGTGGAGACTCAGGGCTGAATCCTGCTTGGTAATATCAGTGTGTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTAGTGTGGACGGCGGCTaGGCGACAGACCTAGGGGCA +
Preference number: 4 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFSVDGG*ATDLGA
Trigger: TGCCCCTAGGTCTGTCGCTCAGCCGCCGTCCACACT...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTATCATTCCACACCACTaGGATCCGCTGCTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAIIPHH*DPLLVW
Trigger: CCAAACCAGCAGCGGATCTCAGTGGTGTGGAATGAT...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTGAAAGATCTTCACGTTaGCGGTGGCCTCTGACTCAC +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAERSSR*RWPLTH
Trigger: GTGAGTCAGAGGCCACCGTCAACGTGAAGATCTTTC...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GGGGCCAGGGCTGTGTGTTCTGGGATCCTCCATTTCCATCCCCAGGAGCTGAGATTGAACATGAGCTTCTaGAAGATCTTCACGTTGACG +
Preference number: 4 (lower is better)
Translates to: GARAVCSGILHFHPQELRLNMSF*KIFTLT
Trigger: CGTCAACGTGAAGATCTTTCAGAAGCTCATGTTCAA...TCTCAGCTCCTGGGGATGGAAATGGAGGATCCCAGAACACACAGCCCTGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CCTGGTGTGAAGCGCCATCTGGGACTCCAGCGGGGAGAGTTTTGTGGCTGGGTTTTGAACATGAGCTTCTaGAAGATCTTCACGTTGACG +
Preference number: 4 (lower is better)
Translates to: PGVKRHLGLQRGEFCGWVLNMSF*KIFTLT
Trigger: CGTCAACGTGAAGATCTTTCAGAAGCTCATGTTCAA...AACCCAGCCACAAAACTCTCCCCGCTGGAGTCCCAGATGGCGCTTCACACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTTTGGTGGGAGGGAGCTaGCCACATCACACACAATCA +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEALVGGS*PHHTQS
Trigger: TGATTGTGTGTGATGTGGTCAGCTCCCTCCCACCAA...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTTTGGTGGGAGGGAGCTaGCCACATCACACACAATCA +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAALVGGS*PHHTQS
Trigger: TGATTGTGTGTGATGTGGTCAGCTCCCTCCCACCAA...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTCTTTGTGTTTCCAGATaGTGGTTGGTGGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEALCVSR*WLVGGS
Trigger: GCTCCCTCCCACCAACCATCATCTGGAAACACAAAG...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTCTTTGTGTTTCCAGATaGTGGTTGGTGGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAALCVSR*WLVGGS
Trigger: GCTCCCTCCCACCAACCATCATCTGGAAACACAAAG...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTCCTCATCTGTTTTCTTaGTGCCCCGGATCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAPHLFS*CPGSAG
Trigger: ACCTGCAGATCCGGGGCATCAAGAAAACAGATGAGG...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTCATCGCACACCAGGGTaGCGGACTGGCCGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELHRTPG*RTGRGW
Trigger: CCAACCTCGGCCAGTCCGTCACCCTGGTGTGCGATG...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCGCCATCCCGAAACCATaGGATCGTGGCACTGGGATA +
Preference number: 4 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSAIPKP*DRGTGI
Trigger: TATCCCAGTGCCACGATCTCATGGTTTCGGGATGGC...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTGGGTGTTGTAGATCTTaGTATTGCTGTAATTGGAGC +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAAGCCRS*YCCNWS
Trigger: GCTCCAATTACAGCAATATCAAGATCTACAACACCC...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GGGGCCAGGGCTGTGTGTTCTGGGATCCTCCATTTCCATCCCCAGGAGCTGAGAGGGTGTTGTAGATCTTaGTATTGCTGTAATTGGAGC +
Preference number: 4 (lower is better)
Translates to: GARAVCSGILHFHPQELRGCCRS*YCCNWS
Trigger: GCTCCAATTACAGCAATATCAAGATCTACAACACCC...TCTCAGCTCCTGGGGATGGAAATGGAGGATCCCAGAACACACAGCCCTGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GGGAGTGGGTATGCGCTAGTGCTGCCTCCTGAGGAGCGCACTGTTACAAGCCGTGGGTGTTGTAGATCTTaGTATTGCTGTAATTGGAGC +
Preference number: 4 (lower is better)
Translates to: GSGYALVLPPEERTVTSRGCCRS*YCCNWS
Trigger: GCTCCAATTACAGCAATATCAAGATCTACAACACCC...ACGGCTTGTAACAGTGCGCTCCTCAGGAGGCAGCACTAGCGCATACCCACTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTTCAGGCCCACGATGGTaGCGATGCCCTCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSSGPRW*RCPPCW
Trigger: CCAGCATGGAGGGCATCGTCACCATCGTGGGCCTGA...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTACTCGGAGGCCGCGCTaGTCTCACCCAGCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELTRRPR*SHPALC
Trigger: GCAAAGGGCTGGGTGAGATCAGCGCGGCCTCCGAGT...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTTGCCAGACGGGAGCCTaGTCTCTGGTTTCCACTCGG +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFCQTGA*SLVSTR
Trigger: CCGAGTGGAAACCAGAGATCAGGCTCCCGTCTGGCA...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000401611.6
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp TCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTGTCCTGAACACAAAATaGGCCGCCTTGGATTTTCCT +
Preference number: 4 (lower is better)
Translates to: STQNGCSAAVAMVVLPGSVLNTK*AALDFP
Trigger: AGGAAAATCCAAGGCGGCTCATTTTGTGTTCAGGAC...AGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp GGTGTGGCAAAGCCATCGACATTACAAGATGAAGAACTGAGTCCACTGAACAGCGCTGGGCCGAGGTCCTaGACACAAAATGAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: GVAKPSTLQDEELSPLNSAGPRS*TQNEPP
Trigger: AGGCGGCTCATTTTGTGTTCAGGACCTCGGCCCAGC...GCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTCCCGGTGCTCAGGCCTaGGGTGGGGCTGCCGTTGGC +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFPGAQA*GGAAVG
Trigger: GCCAACGGCAGCCCCACCTCAGGCCTGAGCACCGGG...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTTCAGGAAGTAGCAGGTaGTGTCCACAACCACCAGGA +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEASGSSR*CPQPPG
Trigger: TCCTGGTGGTTGTGGACATCACCTGCTACTTCCTGA...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTAGGAAAGTTGTGTTATaGCTCCAGACAGTAGGTTGT +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAARKVVL*LQTVGC
Trigger: ACAACCTACTGTCTGGAGTCATAACACAACTTTCCT...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGCCTGCTCGTCACACTTaGGTGCTCCTCCAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: NKREGPRSTECWVGMLMEPARHT*VLLQQN
Trigger: GTTCTGCTGGAGGAGCACTCAAGTGTGACGAGCAGG...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTACAGACAGCCTCAAGTaGAAACCTGGGACTCGGAAG +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAATDSLK*KPGTRK
Trigger: CTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCTGT...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTCAGTATTTACACCAGTaGGAATGGAAACAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAAQYLHQ*EWKQRW
Trigger: CCACCTTTGTTTCCATTCTCACTGGTGTAAATACTG...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTGCGCTGATCGGAGAATaGGTGACAGTCCCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLALIGE*VTVPAS
Trigger: TGAGGCTGGGACTGTCACTCATTCTCCGATCAGCGC...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp GCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTGGGGCAAACTCCTTATaGAGTGGCACAAAAGTATCT +
Preference number: 4 (lower is better)
Translates to: AAVAMVVLPGSSKGGTDLGANSL*SGTKVS
Trigger: AGATACTTTTGTGCCACTTCATAAGGAGTTTGCCCC...AAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp CCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGACCTCTCCTTCTCTACTaGGCACACACAGGCCAGGTA +
Preference number: 4 (lower is better)
Translates to: PWWSCQVLPKGALIFFIGPLLLY*AHTGQV
Trigger: TACCTGGCCTGTGTGTGCTCAGTAGAGAAGGAGAGG...TCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp TGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGGTAGCTCTCCCACACTaGCCTGGGATCCTTATGCTC +
Preference number: 4 (lower is better)
Translates to: WSCQVLPKGALIFFIGTGVALPH*PGILML
Trigger: GAGCATAAGGATCCCAGGTCAGTGTGGGAGAGCTAC...CCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp TGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGCTAGTGCTGCCTCCTaGGGAGCGCACTGTTACAAG +
Preference number: 4 (lower is better)
Translates to: WWSCQVLPKGALIFFIGTASAAS*GAHCYK
Trigger: CTTGTAACAGTGCGCTCCTCAGGAGGCAGCACTAGC...AGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTGCAGAATTGTTTCCTaGCAGCGGCAGCCGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLCRIVS*QRQPSC
Trigger: GCAGCTCGGCTGCCGCTGGCAGGAAACAATTCTGCA...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTTGGGAGGGATGTTCTTaGCGCGGTAAATTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAWEGCS*RGKFCA
Trigger: GGCACAGAATTTACCGCGGCAAGAACATCCCTCCCA...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTTGGGAGGGATGTTCTTaGCGCGGTAAATTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAWEGCS*RGKFCA
Trigger: GGCACAGAATTTACCGCGGCAAGAACATCCCTCCCA...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCATGAGATCCTTAGTTTaGAGCATTGTAATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GCSAAVAMVVLPGSSKGGMRSLV*SIVICW
Trigger: CCAGCAGATTACAATGCTGCAAACTAAGGATCTCAT...GCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp TCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCACCTGCAGAGAAACTaGAGTTCCCAGGAAAAACAA +
Preference number: 4 (lower is better)
Translates to: SAAVAMVVLPGSSKGGTDHLQRN*SSQEKQ
Trigger: TTGTTTTTCCTGGGAACTGCAGTTTCTCTGCAGGTG...ATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTACCACTGAGATCCGCTaGTGGTTTGGGGTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAATTEIR*WFGVSF
Trigger: AAAGCTCACCCCAAACCAGCAGCGGATCTCAGTGGT...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTCCACACACTTGTAAATaGCGGCGTCGTCGATGTTGG +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAPHTCK*RRRRCW
Trigger: CCAACATCGACGACGCCGGCATTTACAAGTGTGTGG...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTCCACACACTTGTAAATaGCGGCGTCGTCGATGTTGG +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAPHTCK*RRRRCW
Trigger: CCAACATCGACGACGCCGGCATTTACAAGTGTGTGG...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTGGATGGTCGCATCCTaGTCGCCAGCCTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWAWMVAS*SPALFS
Trigger: TGAGAACAAGGCTGGCGAGCAGGATGCGACCATCCA...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp TCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTCAGGTAAGAGTGACCTaGTCCTCTAATTCCATGGCA +
Preference number: 4 (lower is better)
Translates to: STQNGCSAAVAMVVLPGSQVRVT*SSNSMA
Trigger: TGCCATGGAATTAGAGGAGCAGGTCACTCTTACCTG...AGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp TTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCCAGGTAAGAGTGACCTaGTCCTCTAATTCCATGGCA +
Preference number: 4 (lower is better)
Translates to: FHTEWLLSSCGHGGPARFQVRVT*SSNSMA
Trigger: TGCCATGGAATTAGAGGAGCAGGTCACTCTTACCTG...GAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTCATCAGTGTACTGGATaGTCTTCAGGGTCAGCGACG +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAHQCTG*SSGSAT
Trigger: CGTCGCTGACCCTGAAGAGCATCCAGTACACTGATG...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATATGGTGTTGCTGGCGGTaGAGATGTACTCTCCGGCAT +
Preference number: 4 (lower is better)
Translates to: WPWWSCQVLPKGALIFFIWCCWR*RCTLRH
Trigger: ATGCCGGAGAGTACATCTGCACCGCCAGCAACACCA...TATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTAGGACTCCTGCCCAATaGGGTTCACTGCAGTACAGT +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEARTPAQ*GSLQYS
Trigger: ACTGTACTGCAGTGAACCGCATTGGGCAGGAGTCCT...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp AGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGAATTCCAAGGACTCCTaGCCAATGCGGTTCACTGCA +
Preference number: 4 (lower is better)
Translates to: RMVAQQLWPWWSCQVLPKNSKDS*PMRFTA
Trigger: TGCAGTGAACCGCATTGGGCAGGAGTCCTTGGAATT...CTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTACTGCACCTGGGCTGTaGTGGAGTATGGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLTAPGL*WSMAPP
Trigger: AGGTGGAGCCATACTCCAGCACAGCCCAGGTGCAGT...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTTCTGGTTCATCAAACTaGACCTGGGCTGTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEASGSSN*TWAVLE
Trigger: CTCCAGCACAGCCCAGGTGCAGTTTGATGAACCAGA...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTACTTCTTCACCAACTaGTCTCCACTCAGCTTTGTA +
Preference number: 4 (lower is better)
Translates to: LLSSCGHGGPARFFQRGHYFFTN*SPLSFV
Trigger: TACAAAGCTGAGTGGAGAGCAGTTGGTGAAGAAGTA...GTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp GGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCTCATACCACTTGGAATaGCATACTTCTTCACCAACT +
Preference number: 4 (lower is better)
Translates to: GCSAAVAMVVLPGSSKGGSYHLE*HTSSPT
Trigger: AGTTGGTGAAGAAGTATGGCATTCCAAGTGGTATGA...GCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCCCATCCTCTCCCATCTaGCCTTCGAGCTTAGGTGCA +
Preference number: 4 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSPSSPI*PSSLGA
Trigger: TGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGG...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ACCTTCTCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGGAGCCGCCGTCATCCTaGTTGATCAGGTTCACTTTA +
Preference number: 4 (lower is better)
Translates to: TFSSTQNGCSAAVAMVVLEPPSS*LIRFTL
Trigger: TAAAGTGAACCTGATCAAGCAGGATGACGGCGGCTC...CAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGAGAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp TGGCGGCTAATCAGAAAGTGGTCTAACCCCCAAAGAAACACAAAAATAACCAAACCTCCTCCATGTCCTTaGCCTTGGCCCCGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: WRLIRKWSNPQRNTKITKPPPCP*PWPRAR
Trigger: CCGGGCCCGGGGCCAAGGGCAAGGACATGGAGGAGG...TTTGGTTATTTTTGTGTTTCTTTGGGGGTTAGACCACTTTCTGATTAGCCGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGCTGGCACTCTGGCTTTaGTTCTACGGGGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: NKREGPRSTECWVGMLMELALWL*FYGALL
Trigger: GAGAAGGGCCCCGTAGAAGCAAAGCCAGAGTGCCAG...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGAGGGTCCAGTGGCCCTaGTCGTCACACTTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: NKREGPRSTECWVGMLMERVQWP*SSHLSA
Trigger: AGCACTCAAGTGTGACGAGCAGGGCCACTGGACCCT...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTATTGCCTCCCAAGGTTaGTGGGATGGCTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLIASQG*WDGCGL
Trigger: CAGCCCACAGCCATCCCAGCAACCTTGGGAGGCAAT...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp AGCACACACACTGATATTACCAAGCAGGATTCAGCCCTGAGTCTCCACAAGGGAATTGCCTCCCAAGGTTaGTGGGATGGCTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: STHTDITKQDSALSLHKGIASQG*WDGCGL
Trigger: CAGCCCACAGCCATCCCAGCAACCTTGGGAGGCAAT...TCCCTTGTGGAGACTCAGGGCTGAATCCTGCTTGGTAATATCAGTGTGTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp ACCTTCTCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGTGTAGGATGCAGAATTaGCTCCCAAGGTTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: TFSSTQNGCSAAVAMVVLCRMQN*LPRLLG
Trigger: TCCCAGCAACCTTGGGAGGCAATTCTGCATCCTACA...CAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGAGAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp AGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGTGTAGGATGCAGAATTaGCTCCCAAGGTTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: RMVAQQLWPWWSCQVLPKCRMQN*LPRLLG
Trigger: TCCCAGCAACCTTGGGAGGCAATTCTGCATCCTACA...CTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp CAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTGACAAAGGTGTAGGATaGAGAATTGCCTCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: QLWPWWSCQVLPKGALIFDKGVG*RIASQG
Trigger: ACCTTGGGAGGCAATTCTGCATCCTACACCTTTGTC...AAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp GTCCTCTCCACACTTAGGACGAGATCTCCAAAGGGTCCCTTCAGAAAGATGGACAGCTGGTTCTGTGGTTaGAAGGGCAGGAAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: VLSTLRTRSPKGPFRKMDSWFCG*KGRKRP
Trigger: TGGCCTCTTCCTGCCCTTGCAACCACAGAACCAGCT...GTCCATCTTTCTGAAGGGACCCTTTGGAGATCTCGTCCTAAGTGTGGAGAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621518.4
CDS-3UTR GCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTGGCCATGGTGGTCCTaGCAGGTTCTTCCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLWPWWS*QVLPKG
Trigger: CCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCA...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp CTCTCCCATCTGCCCTTCGAGCTTAGGTGCACTGGGTTCCCCTTCTGCTTTCTGACTGGGTTCCCCTTCTaGTTTCTGCCTTCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: LSHLPFELRCTGFPFCFLTGFPF*FLPSCS
Trigger: AGAACAAGAAGGCAGAAAGCAGAAGGGGAACCCAGT...CAGAAAGCAGAAGGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR GCA 90 bp TGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTGCCTGAGCTACTGTaGAGCATGGAGCCTCTGATG +
Preference number: 4 (lower is better)
Translates to: WSCQVLPKGALIFFIGTGLPELL*SMEPLM
Trigger: CATCAGAGGCTCCATGCTGCACAGTAGCTCAGGCAG...CCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp CCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGACTGCCTGAGCTACTGTaGAGCATGGAGCCTCTGATG +
Preference number: 4 (lower is better)
Translates to: PWWSCQVLPKGALIFFIGLPELL*SMEPLM
Trigger: CATCAGAGGCTCCATGCTGCACAGTAGCTCAGGCAG...TCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp AGGGAGGACAAGGAGCACAGAGTTAGAATGAGGGGAATGTGTGGTGATTTTAACGGGTGCACTCACTCCTaGAGGGTCTCTGAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: REDKEHRVRMRGMCGDFNGCTHS*RVSEGC
Trigger: GCAGCCCTCAGAGACCCTGCAGGAGTGAGTGCACCC...GTTAAAATCACCACACATTCCCCTCATTCTAACTCTGTGCTCCTTGTCCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp AACATAGGTGGCTTTGCCCCTCAGACCACAGCATGGGATCATTTGGAATCCCAACCCTTCGAGCTTAGGTaGACTGGGTTCCCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: NIGGFAPQTTAWDHLESQPFELR*TGFPCS
Trigger: GCTACAGGGGAACCCAGTGCACCTAAGCTCGAAGGG...TTGGGATTCCAAATGATCCCATGCTGTGGTCTGAGGGGCAAAGCCACCTATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621518.4
CDS-3UTR GCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTCCCTTCGAGCTTAGGTaGACTGGGTTCCCCTTTAGC +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWAPFELR*TGFPFS
Trigger: GCTAAAGGGGAACCCAGTGCACCTAAGCTCGAAGGG...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000621850.4
CDS-3UTR CCA 90 bp CAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTAGCATTGTAATCTGCTaGCTGGGAGGGATGTTCTTG +
Preference number: 4 (lower is better)
Translates to: QLWPWWSCQVLPKGALIFSIVIC*LGGMFL
Trigger: CAAGAACATCCCTCCCAGCCAGCAGATTACAATGCT...AAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTACGCTGATCTCCCCCTaGCTGGGAACAATATCCACC +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWATLISP*LGTIST
Trigger: GGTGGATATTGTTCCCAGCCAGGGGGAGATCAGCGT...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp ACCTTCTCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGGAACTCCTGTGGGGTTaGCGCATTCTTGAACATGAG +
Preference number: 4 (lower is better)
Translates to: TFSSTQNGCSAAVAMVVLELLWG*RILEHE
Trigger: CTCATGTTCAAGAATGCGCCAACCCCACAGGAGTTC...CAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGAGAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTCTCCCGGAACTCCTGTaGGGTTGGCGCATTCTTGAA +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWALPELL*GWRILE
Trigger: TTCAAGAATGCGCCAACCCCACAGGAGTTCCGGGAG...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATACTCCCGGAACTCCTGTaGGGTTGGCGCATTCTTGAA +
Preference number: 4 (lower is better)
Translates to: WPWWSCQVLPKGALIFFILPELL*GWRILE
Trigger: TTCAAGAATGCGCCAACCCCACAGGAGTTCCGGGAG...TATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTCCAGATGATGGTTGGTaGGAGGGAGCTGACCACATC +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWAPDDGW*EGADHI
Trigger: GATGTGGTCAGCTCCCTCCCACCAACCATCATCTGG...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp AGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGATATTCTGCCTGGCCTaGATGGTAGGTGGCACATTC +
Preference number: 4 (lower is better)
Translates to: RMVAQQLWPWWSCQVLPKIFCLA*MVGGTF
Trigger: GAATGTGCCACCTACCATCCAGGCCAGGCAGAATAT...CTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTGGCCGAGGTTGGCGGTaGCATTCACAATATTCTGCC +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWAGRGWR*HSQYSA
Trigger: GGCAGAATATTGTGAATGCCACCGCCAACCTCGGCC...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCCCTTTGTCCAGCTCATaGTGGGCTCTGGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSPLSSS*WALGSL
Trigger: AAGGCTTCCCAGAGCCCACCATGAGCTGGACAAAGG...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTCCTCTCCACACTTAGGACGAGATCTCCAAAGGGTCCCTTCAGAAAGATGGACCCTTTGTCCAGCTCATaGTGGGCTCTGGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: VLSTLRTRSPKGPFRKMDPLSSS*WALGSL
Trigger: AAGGCTTCCCAGAGCCCACCATGAGCTGGACAAAGG...GTCCATCTTTCTGAAGGGACCCTTTGGAGATCTCGTCCTAAGTGTGGAGAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTGACGACACACGGGCATaGCTACGCACCACCATGTGC +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFDDTRA*LRTTMC
Trigger: GCACATGGTGGTGCGTAGCCATGCCCGTGTGTCGTC...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTGGCCGATGGTGTTGCTaGCGGTGCAGATGTACTCTC +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLGRWCC*RCRCTL
Trigger: GAGAGTACATCTGCACCGCCAGCAACACCATCGGCC...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GTGGATGCTTCCAACCTGTCCTGTAGACTGATGCTCAAAGCCATTCTGTGGGTCTCAAGGTACATGGACTaGGAGTCCTGGCCGATGGTG +
Preference number: 4 (lower is better)
Translates to: VDASNLSCRLMLKAILWVSRYMD*ESWPMV
Trigger: CACCATCGGCCAGGACTCCCAGTCCATGTACCTTGA...GACCCACAGAATGGCTTTGAGCATCAGTCTACAGGACAGGTTGGAAGCATCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTCAGGTGATGTTCACCTaGTTCCCCTCCCAAGTGTAC +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAQVMFT*FPSQVY
Trigger: GTACACTTGGGAGGGGAACCAGGTGAACATCACCTG...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GGCTGGGGCATTCAGGAAGCACTGACAGGTTGGCTCGGCCCCAATTTATTAACCATGAGATCGTGGCACTaGGATAGGCAAATACCTCGC +
Preference number: 4 (lower is better)
Translates to: GWGIQEALTGWLGPNLLTMRSWH*DRQIPR
Trigger: GCGAGGTATTTGCCTATCCCAGTGCCACGATCTCAT...GGTTAATAAATTGGGGCCGAGCCAACCTGTCAGTGCTTCCTGAATGCCCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTGAGCTTGGCAGCAGCTaGCCATCCCGAAACCATGAG +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLELGSS*PSRNHE
Trigger: CTCATGGTTTCGGGATGGCCAGCTGCTGCCAAGCTC...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGGAGCTTGGCAGCAGCTaGCCATCCCGAAACCATGAG +
Preference number: 4 (lower is better)
Translates to: NKREGPRSTECWVGMLMEELGSS*PSRNHE
Trigger: CTCATGGTTTCGGGATGGCCAGCTGCTGCCAAGCTC...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTTCACCTCCAGATAGCTaGCAGAGGGGGTGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEASPPDS*QRGCCR
Trigger: TCTACAACACCCCCTCTGCCAGCTATCTGGAGGTGA...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGAGTATGGCTCCACCTaGTCGATGGATGGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAEYGST*SMDGEE
Trigger: CTCTTCACCATCCATCGACCAGGTGGAGCCATACTC...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGCTGTGCTGGAGTATaGCTCCACCTGGTCGATGGA +
Preference number: 4 (lower is better)
Translates to: WWSCQVLPKGALIFFIGTGCAGV*LHLVDG
Trigger: TCCATCGACCAGGTGGAGCCATACTCCAGCACAGCC...AGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp AGTTGCCCATCATGTCAGCAAAACGCTCATGTGAATCAGTGCGGTCTGGCTCTTGGCTGTGCTGGAGTATaGCTCCACCTGGTCGATGGA +
Preference number: 4 (lower is better)
Translates to: SCPSCQQNAHVNQCGLALGCAGV*LHLVDG
Trigger: TCCATCGACCAGGTGGAGCCATACTCCAGCACAGCC...AAGAGCCAGACCGCACTGATTCACATGAGCGTTTTGCTGACATGATGGGCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTTCATCAAACTGCACCTaGGCTGTGCTGGAGTATGGC +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAASSNCT*AVLEYG
Trigger: GCCATACTCCAGCACAGCCCAGGTGCAGTTTGATGA...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTGGGCACCCCACCTGTaGCCTCTGGTTCATCAAACT +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWAWAPHL*PLVHQT
Trigger: AGTTTGATGAACCAGAGGCCACAGGTGGGGTGCCCA...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATATGGGCACCCCACCTGTaGCCTCTGGTTCATCAAACT +
Preference number: 4 (lower is better)
Translates to: WPWWSCQVLPKGALIFFIWAPHL*PLVHQT
Trigger: AGTTTGATGAACCAGAGGCCACAGGTGGGGTGCCCA...TATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTTGGCATCATACCACTTaGAATGCCATACTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAAWHHTT*NAILLH
Trigger: GTGAAGAAGTATGGCATTCCAAGTGGTATGATGCCA...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCCGATGCCCTCCATGCTaGCTTCCTTGGCATCATACC +
Preference number: 4 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSRCPPC*LPWHHT
Trigger: GGTATGATGCCAAGGAAGCCAGCATGGAGGGCATCG...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTCGATGCCCTCCATGCTaGCTTCCTTGGCATCATACC +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWARCPPC*LPWHHT
Trigger: GGTATGATGCCAAGGAAGCCAGCATGGAGGGCATCG...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp AAAACCTTCTCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCGATGCCCTCCATGCTaGCTTCCTTGGCATCATACC +
Preference number: 4 (lower is better)
Translates to: KTFSSTQNGCSAAVAMVVRCPPC*LPWHHT
Trigger: GGTATGATGCCAAGGAAGCCAGCATGGAGGGCATCG...GACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGAGAAGGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp AGTTGCCCATCATGTCAGCAAAACGCTCATGTGAATCAGTGCGGTCTGGCTCTTGGGTTCCCCTTGGACTaGCTGCGTCTTGAACTCGGA +
Preference number: 4 (lower is better)
Translates to: SCPSCQQNAHVNQCGLALGFPLD*LRLELG
Trigger: TCCGAGTTCAAGACGCAGCCAGTCCAAGGGGAACCC...AAGAGCCAGACCGCACTGATTCACATGAGCGTTTTGCTGACATGATGGGCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621128.4
CDS-3UTR CCA 90 bp AGCACACACACTGATATTACCAAGCAGGATTCAGCCCTGAGTCTCCACAAGGGAGACTTCAGCATGACGTaGTCACTGCCAGACGGGAGC +
Preference number: 4 (lower is better)
Translates to: STHTDITKQDSALSLHKGDFSMT*SLPDGS
Trigger: GCTCCCGTCTGGCAGTGACCACGTCATGCTGAAGTC...TCCCTTGTGGAGACTCAGGGCTGAATCCTGCTTGGTAATATCAGTGTGTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTGACTTCAGCATGACGTaGTCACTGCCAGACGGGAGC +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLDFSMT*SLPDGS
Trigger: GCTCCCGTCTGGCAGTGACCACGTCATGCTGAAGTC...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000401611.6
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTCCACGATGGGCTCCTTaGACTCATCTTTCGAGAAGG +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAPRWAP*THLSRR
Trigger: CCTTCTCGAAAGATGAGTCCAAGGAGCCCATCGTGG...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTCCACGATGGGCTCCTTaGACTCATCTTTCGAGAAGG +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAPRWAP*THLSRR
Trigger: CCTTCTCGAAAGATGAGTCCAAGGAGCCCATCGTGG...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTTGTTTCCCTCCATCATaGTTTGGGGTCCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEACFPPS*FGVLSS
Trigger: GGAGGAGAGGACCCCAAACCATGATGGAGGGAAACA...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGGTGGCGTGGTCTCGTTaGGCTCTGTGTGTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: NKREGPRSTECWVGMLMEVAWSR*ALCVSL
Trigger: GAGGGAAACACACAGAGCCCAACGAGACCACGCCAC...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGGACTTCGGCTGGCGCTaGCTTCGTTTCTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: NKREGPRSTECWVGMLMEDFGWR*LRFCLL
Trigger: CAGGAGACAGAAACGAAGCCAGCGCCAGCCGAAGTC...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTTCTCCTTTGTCTGTGTaGCGTCATTGGGGACCGTCT +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAASPLSV*RHWGPS
Trigger: AGACGGTCCCCAATGACGCCACACAGACAAAGGAGA...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTTCTCCTTTGTCTGTGTaGCGTCATTGGGGACCGTCT +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEASPLSV*RHWGPS
Trigger: AGACGGTCCCCAATGACGCCACACAGACAAAGGAGA...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTCACAAAGGGGATGTGTaGGGTAATAATGTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAAHKGDV*GNNVCS
Trigger: TGAACACACATTATTACCCCACACATCCCCTTTGTG...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGAAGTGTCAGAACGTTaGGGAGAGTGGCCCACAGAA +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAEVSER*GEWPTE
Trigger: TTCTGTGGGCCACTCTCCCCAACGTTCTGACACTTC...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTCAGGGCTGTGTGTTCTaGGATCCTCCATTTCCATCC +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAQGCVF*DPPFPS
Trigger: GGATGGAAATGGAGGATCCCAGAACACACAGCCCTG...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GGTGTGGCAAAGCCATCGACATTACAAGATGAAGAACTGAGTCCACTGAACAGCGGCATGGGCTTGGCCTaGTGTGGCAAAGCCATCGAC +
Preference number: 4 (lower is better)
Translates to: GVAKPSTLQDEELSPLNSGMGLA*CGKAID
Trigger: GTCGATGGCTTTGCCACACCAGGCCAAGCCCATGCC...GCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTAGTCTTGACAAGGTATaGCATGGGCTTGGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEASLDKV*HGLGLV
Trigger: CACCAGGCCAAGCCCATGCCATACCTTGTCAAGACT...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTACTGGGTTCCCGGACTaGCTGCGTCTTGAACTCGGA +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLTGFPD*LRLELG
Trigger: TCCGAGTTCAAGACGCAGCCAGTCCGGGAACCCAGT...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000401611.6
CDS-3UTR CCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACAAGGCGCTGGGCCCCTTaGAAGGGGTGGCCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTRRWAP*KGWPGQ
Trigger: CTGGCCAGGCCACCCCTTCCAAGGGGCCCAGCGCCT...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR CCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTAGGAGGGCTATGGACTaGCTGCGTCTTGAACTCGGA +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWARRAMD*LRLELG
Trigger: TCCGAGTTCAAGACGCAGCCAGTCCATAGCCCTCCT...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp CAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTCCAAGTTGTATCTGGTaGAGACAATGGAACAGGGGT +
Preference number: 4 (lower is better)
Translates to: QLWPWWSCQVLPKGALIFPSCIW*RQWNRG
Trigger: ACCCCTGTTCCATTGTCTCCACCAGATACAACTTGG...AAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp AAAGCCATTCTGTGGGTCACTGCTGAACCACGGCCCCACTCTGTGCTGATCTGCAGGCCAAGTTGTATCTaGTGGAGACAATGGAACAGG +
Preference number: 4 (lower is better)
Translates to: KAILWVTAEPRPHSVLICRPSCI*WRQWNR
Trigger: CCTGTTCCATTGTCTCCACCAGATACAACTTGGCCT...GCAGATCAGCACAGAGTGGGGCCGTGGTTCAGCAGTGACCCACAGAATGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621518.4
CDS-3UTR CCA 90 bp AAAACCTTCTCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCACTGGGTTCCCTAGCTaGTTCTGTGGTTGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: KTFSSTQNGCSAAVAMVVTGFPS*FCGCKG
Trigger: GCCCTTGCAACCACAGAACCAGCTAGGGAACCCAGT...GACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGAGAAGGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526322.5
CDS-3UTR CCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTGTTGCTCAGCAGCTGTaGCCATGGTGGTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFVAQQL*PWWSCQ
Trigger: CTGGCAGGACCACCATGGCCACAGCTGCTGAGCAAC...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGAAGCACTGACAGGTTaGCTCGGCCCCAATTTATTA +
Preference number: 4 (lower is better)
Translates to: EWLLSSCGHGGPARFFQREALTG*LGPNLL
Trigger: TAATAAATTGGGGCCGAGCCAACCTGTCAGTGCTTC...CCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp CGCCAACATAGGTGGCTTTGCCCCTCAGACCACAGCATGGGATCATTTGGAATCCACCAATACAGAGGCTaGGGCATTCAGGAAGCACTG +
Preference number: 4 (lower is better)
Translates to: RQHRWLCPSDHSMGSFGIHQYRG*GIQEAL
Trigger: CAGTGCTTCCTGAATGCCCCAGCCTCTGTATTGGTG...GATTCCAAATGATCCCATGCTGTGGTCTGAGGGGCAAAGCCACCTATGTTGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGCGGAGATCCTTGCGCTaGCCCGGGTTCGTTTTGATG +
Preference number: 4 (lower is better)
Translates to: NKREGPRSTECWVGMLMERRSLR*PGFVLM
Trigger: CATCAAAACGAACCCGGGCCAGCGCAAGGATCTCCG...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTCGGAGATCCTTGCGCTaGCCCGGGTTCGTTTTGATG +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLRRSLR*PGFVLM
Trigger: CATCAAAACGAACCCGGGCCAGCGCAAGGATCTCCG...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000621518.4
CDS-3UTR TCA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTGTTGACGGTGGCCTCTaGCTCACTGCCATCCTCGCC +
Preference number: 4 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPVDGGL*LTAILA
Trigger: GGCGAGGATGGCAGTGAGTCAGAGGCCACCGTCAAC...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCGAAAGATCTTCACGTTaGCGGTGGCCTCTGACTCAC +
Preference number: 4 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSERSSR*RWPLTH
Trigger: GTGAGTCAGAGGCCACCGTCAACGTGAAGATCTTTC...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAGAAAGATCTTCACGTTaGCGGTGGCCTCTGACTCAC +
Preference number: 4 (lower is better)
Translates to: PWWSCQVLPKGALIFFIGERSSR*RWPLTH
Trigger: GTGAGTCAGAGGCCACCGTCAACGTGAAGATCTTTC...TCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp AAAACCTTCTCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCTTGGTGGGAGGGAGCTaGCCACATCACACACAATCA +
Preference number: 4 (lower is better)
Translates to: KTFSSTQNGCSAAVAMVVLVGGS*PHHTQS
Trigger: TGATTGTGTGTGATGTGGTCAGCTCCCTCCCACCAA...GACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGAGAAGGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp GTGGATGCTTCCAACCTGTCCTGTAGACTGATGCTCAAAGCCATTCTGTGGGTCCCTCATCTGTTTTCTTaGTGCCCCGGATCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: VDASNLSCRLMLKAILWVPHLFS*CPGSAG
Trigger: ACCTGCAGATCCGGGGCATCAAGAAAACAGATGAGG...GACCCACAGAATGGCTTTGAGCATCAGTCTACAGGACAGGTTGGAAGCATCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp TCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATGGGTGTTGTAGATCTTaGTATTGCTGTAATTGGAGC +
Preference number: 4 (lower is better)
Translates to: SAAVAMVVLPGSSKGGTDGCCRS*YCCNWS
Trigger: GCTCCAATTACAGCAATATCAAGATCTACAACACCC...ATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTCTGCTTGAACAAGGATaGATTCCAAGGACTCCTGCC +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAALLEQG*IPRTPA
Trigger: GGCAGGAGTCCTTGGAATTCATCCTTGTTCAAGCAG...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTGAGGGGGTGTCTGCTTaGACAAGGATGAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAEGVSA*TRMNSK
Trigger: CTTGGAATTCATCCTTGTTCAAGCAGACACCCCCTC...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTTCAGGCCCACGATGGTaGCGATGCCCTCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPSGPRW*RCPPCW
Trigger: CCAGCATGGAGGGCATCGTCACCATCGTGGGCCTGA...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CATGCACGCATACTCATATGGATTCTTCAGGAGATTCAGGTCCTCCACACACATCCAGGGACTTCAGCATaGCGTGGTCACTGCCAGACG +
Preference number: 4 (lower is better)
Translates to: HARILIWILQEIQVLHTHPGTSA*RGHCQT
Trigger: CGTCTGGCAGTGACCACGTCATGCTGAAGTCCCTGG...ATGTGTGTGGAGGACCTGAATCTCCTGAAGAATCCATATGAGTATGCGTGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR TCA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTCCAGGGACTTCAGCATaGCGTGGTCACTGCCAGACG +
Preference number: 4 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSPGTSA*RGHCQT
Trigger: CGTCTGGCAGTGACCACGTCATGCTGAAGTCCCTGG...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGCTGGGCCGAGGTCCTaGACACAAAATGAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSAGPRS*TQNEPP
Trigger: AGGCGGCTCATTTTGTGTTCAGGACCTCGGCCCAGC...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTCATTGGGGACCGTCTTaGCTTCGGCTGGCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELHWGPS*LRLALA
Trigger: AGCCAGCGCCAGCCGAAGTCAAGACGGTCCCCAATG...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTAAAGCAAGCGTGGGATaGTCCTACCTACCTCTAGGT +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAKASVG*SYLPLG
Trigger: ACCTAGAGGTAGGTAGGATCATCCCACGCTTGCTTT...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GGGGCCAGGGCTGTGTGTTCTGGGATCCTCCATTTCCATCCCCAGGAGCTGAGAAACATAACCCCACATTaGGCAAATGACAAGACCATT +
Preference number: 4 (lower is better)
Translates to: GARAVCSGILHFHPQELRNITPH*ANDKTI
Trigger: AATGGTCTTGTCATTTGCTCAATGTGGGGTTATGTT...TCTCAGCTCCTGGGGATGGAAATGGAGGATCCCAGAACACACAGCCCTGGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CAGACACCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCGGGCCAGGTGATCTaGGGGCTGACCTGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: QTPRLSHSTVCSKISLHVPGQVI*GLTCFF
Trigger: GAAGAAACAGGTCAGCCCTCAGATCACCTGGCCCGG...AACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGGTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCACAGACAGCCTCAAGTaGAAACCTGGGACTCGGAAG +
Preference number: 4 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSTDSLK*KPGTRK
Trigger: CTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCTGT...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp AATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGGGCAAACTCCTTATaGAGTGGCACAAAAGTATCT +
Preference number: 4 (lower is better)
Translates to: NGCSAAVAMVVLPGSSKGGANSL*SGTKVS
Trigger: AGATACTTTTGTGCCACTTCATAAGGAGTTTGCCCC...CCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATT
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp TCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTGGGGCAAACTCCTTATaGAGTGGCACAAAAGTATCT +
Preference number: 4 (lower is better)
Translates to: SSTQNGCSAAVAMVVLPGGANSL*SGTKVS
Trigger: AGATACTTTTGTGCCACTTCATAAGGAGTTTGCCCC...ACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp GAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGAGCACAGAGTTAGAATaGGGGGAATGTGTGGTGATT +
Preference number: 4 (lower is better)
Translates to: EWLLSSCGHGGPARFFQRSTELE*GECVVI
Trigger: AATCACCACACATTCCCCTCATTCTAACTCTGTGCT...CCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp AGTTTTGTGGCTGGGTTGAGAGGCACTACCCTGCCTGAGCTACTGTGCAGCATGACCTGTCCTGTAGACTaGTGCTCAAAGCCATTCTGT +
Preference number: 4 (lower is better)
Translates to: SFVAGLRGTTLPELLCSMTCPVD*CSKPFC
Trigger: ACAGAATGGCTTTGAGCATCAGTCTACAGGACAGGT...CATGCTGCACAGTAGCTCAGGCAGGGTAGTGCCTCTCAACCCAGCCACAAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTGACCCTGGGATGTGTTaGGATGACAGGGCCACGTCA +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFDPGMC*DDRATS
Trigger: TGACGTGGCCCTGTCATCTCAACACATCCCAGGGTC...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGGCCCGGGTTCGTTTTaGTGGAACTGGGATGGGAGC +
Preference number: 4 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSGPGSF*WNWDGS
Trigger: GCTCCCATCCCAGTTCCATCAAAACGAACCCGGGCC...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GGTGTGGCAAAGCCATCGACATTACAAGATGAAGAACTGAGTCCACTGAACAGCTGCAGAATTGTTTCCTaGCAGCGGCAGCCGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GVAKPSTLQDEELSPLNSCRIVS*QRQPSC
Trigger: GCAGCTCGGCTGCCGCTGGCAGGAAACAATTCTGCA...GCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ACGAGGACTGAAAGCACATCCCAGAACGTTCATCAGCCCCAGAAAATATCCAACTGCAGAATTGTTTCCTaGCAGCGGCAGCCGAGCTGC +
Preference number: 4 (lower is better)
Translates to: TRTESTSQNVHQPQKISNCRIVS*QRQPSC
Trigger: GCAGCTCGGCTGCCGCTGGCAGGAAACAATTCTGCA...GTTGGATATTTTCTGGGGCTGATGAACGTTCTGGGATGTGCTTTCAGTCCTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp TGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATATGGGAGGGATGTTCTTaGCGCGGTAAATTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: WPWWSCQVLPKGALIFFIWEGCS*RGKFCA
Trigger: GGCACAGAATTTACCGCGGCAAGAACATCCCTCCCA...TATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTTGCAGCATTGTAATCTaGTGGCTGGGAGGGATGTTC +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEACSIVI*WLGGMF
Trigger: GAACATCCCTCCCAGCCAGCAGATTACAATGCTGCA...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACATGAGATCCTTAGTTTaGAGCATTGTAATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LLSSCGHGGPARFFQRGHMRSLV*SIVICW
Trigger: CCAGCAGATTACAATGCTGCAAACTAAGGATCTCAT...GTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp TTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCCACCTGCAGAGAAACTaGAGTTCCCAGGAAAAACAA +
Preference number: 4 (lower is better)
Translates to: FHTEWLLSSCGHGGPARFHLQRN*SSQEKQ
Trigger: TTGTTTTTCCTGGGAACTGCAGTTTCTCTGCAGGTG...GAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTACCACTGAGATCCGCTaGTGGTTTGGGGTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWATTEIR*WFGVSF
Trigger: AAAGCTCACCCCAAACCAGCAGCGGATCTCAGTGGT...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTCCACACACTTGTAAATaGCGGCGTCGTCGATGTTGG +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWAPHTCK*RRRRCW
Trigger: CCAACATCGACGACGCCGGCATTTACAAGTGTGTGG...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp CCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGACCACACACTTGTAAATaGCGGCGTCGTCGATGTTGG +
Preference number: 4 (lower is better)
Translates to: PWWSCQVLPKGALIFFIGPHTCK*RRRRCW
Trigger: CCAACATCGACGACGCCGGCATTTACAAGTGTGTGG...TCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTCCCGTGCCAGGATTCTaGCCTCACAGCGATAAGTGC +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFPVPGF*PHSDKC
Trigger: GCACTTATCGCTGTGAGGGCAGAATCCTGGCACGGG...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGTGGATGGTCGCATCCTaGTCGCCAGCCTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: NKREGPRSTECWVGMLMEWMVAS*SPALFS
Trigger: TGAGAACAAGGCTGGCGAGCAGGATGCGACCATCCA...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTCATCAGTGTACTGGATaGTCTTCAGGGTCAGCGACG +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWAHQCTG*SSGSAT
Trigger: CGTCGCTGACCCTGAAGAGCATCCAGTACACTGATG...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTGGTGTTGCTGGCGGTaGAGATGTACTCTCCGGCAT +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLWCCWR*RCTLRH
Trigger: ATGCCGGAGAGTACATCTGCACCGCCAGCAACACCA...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGTGGTGTTGCTGGCGGTaGAGATGTACTCTCCGGCAT +
Preference number: 4 (lower is better)
Translates to: NKREGPRSTECWVGMLMEWCCWR*RCTLRH
Trigger: ATGCCGGAGAGTACATCTGCACCGCCAGCAACACCA...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTCCCAATGCGGTTCACTaGAGTACAGTTGTAGTTCCC +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAPNAVH*STVVVP
Trigger: GGGAACTACAACTGTACTGCAGTGAACCGCATTGGG...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTCCCAATGCGGTTCACTaGAGTACAGTTGTAGTTCCC +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAPNAVH*STVVVP
Trigger: GGGAACTACAACTGTACTGCAGTGAACCGCATTGGG...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTAGGACTCCTGCCCAATaGGGTTCACTGCAGTACAGT +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWARTPAQ*GSLQYS
Trigger: ACTGTACTGCAGTGAACCGCATTGGGCAGGAGTCCT...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTAATTCCAAGGACTCCTaGCCAATGCGGTTCACTGCA +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEANSKDS*PMRFTA
Trigger: TGCAGTGAACCGCATTGGGCAGGAGTCCTTGGAATT...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTCTGGTTCATCAAACTaGACCTGGGCTGTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWASGSSN*TWAVLE
Trigger: CTCCAGCACAGCCCAGGTGCAGTTTGATGAACCAGA...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp TGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATATCTGGTTCATCAAACTaGACCTGGGCTGTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: WPWWSCQVLPKGALIFFISGSSN*TWAVLE
Trigger: CTCCAGCACAGCCCAGGTGCAGTTTGATGAACCAGA...TATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGAGCCGCCGTCATCCTaGTTGATCAGGTTCACTTTA +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAEPPSS*LIRFTL
Trigger: TAAAGTGAACCTGATCAAGCAGGATGACGGCGGCTC...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GGGCATTCAGGAAGCACTGACAGGTTGGCTCGGCCCCAATTTATTAACCCTCCTGAGCCGCCGTCATCCTaGTTGATCAGGTTCACTTTA +
Preference number: 4 (lower is better)
Translates to: GHSGSTDRLARPQFINPPEPPSS*LIRFTL
Trigger: TAAAGTGAACCTGATCAAGCAGGATGACGGCGGCTC...AGGAGGGTTAATAAATTGGGGCCGAGCCAACCTGTCAGTGCTTCCTGAATGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCGGCCTGAGGTGGGGCTaGCGTTGGCTGGGATGGCTG +
Preference number: 4 (lower is better)
Translates to: VVSMFHLVKSFITREKAPGLRWG*RWLGWL
Trigger: CAGCCATCCCAGCCAACGGCAGCCCCACCTCAGGCC...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAACTGGCACTCTGGCTTTaGTTCTACGGGGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCELALWL*FYGALL
Trigger: GAGAAGGGCCCCGTAGAAGCAAAGCCAGAGTGCCAG...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTCTGTGGTGTTGGAAATaGTCTGGTGAAGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEALWCWK*SGEAAV
Trigger: CACAGCAGCTTCACCAGAGCATTTCCAACACCACAG...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTAAGAAGTCTGAATACTaGAAATTGAGATCTACCCCC +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAAKKSEY*KLRSTP
Trigger: GGGGGTAGATCTCAATTTGCAGTATTCAGACTTCTT...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTGTGACCAGAAGAGCCTaGCCCTCACTGCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPVTRRA*PSLLGP
Trigger: AGGGCCCAGCAGTGAGGGGCAGGCTCTTCTGGTCAC...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCCTCGTCACACTTGAGTaGTCCTCCAGCAGAACTTGG +
Preference number: 4 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSLVTLE*SSSRTW
Trigger: CCAAGTTCTGCTGGAGGAGCACTCAAGTGTGACGAG...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CAGACACCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTTATACACCACAGCCCTaGAGGGTCCAGTGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: QTPRLSHSTVCSKISLHVYTPQP*RVQWPC
Trigger: GCAGGGCCACTGGACCCTGCAGGGCTGTGGTGTATA...AACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGGTGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTCTACGCACCACCATGTaGCCATCCAGAGTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEALRTTM*PSRVFS
Trigger: AGAAAAGACTCTGGATGGGCACATGGTGGTGCGTAG...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531044.5
ENST00000618266.4
CDS-3UTR GCA 90 bp AGGGAGGACAAGGAGCACAGAGTTAGAATGAGGGGAATGTGTGGTGATTTTAACGGGCTATGGACTGGCTaGGTCTTGAACTCGGAGGCC +
Preference number: 4 (lower is better)
Translates to: REDKEHRVRMRGMCGDFNGLWTG*VLNSEA
Trigger: GGCCTCCGAGTTCAAGACGCAGCCAGTCCATAGCCC...GTTAAAATCACCACACATTCCCCTCATTCTAACTCTGTGCTCCTTGTCCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621518.4
CDS-3UTR GCA 90 bp CCTGGTGTGAAGCGCCATCTGGGACTCCAGCGGGGAGAGTTTTGTGGCTGGGTTACATGGGCACTTAAATaGTTAATTGCAAGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: PGVKRHLGLQRGEFCGWVTWALK*LIASKA
Trigger: GGCTTTGCTTGCAATTAAGCATTTAAGTGCCCATGT...AACCCAGCCACAAAACTCTCCCCGCTGGAGTCCCAGATGGCGCTTCACACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp GGTGTGGCAAAGCCATCGACATTACAAGATGAAGAACTGAGTCCACTGAACAGCCAACTCGGAGATCCTTaGGCTGGCCCGGGTTCGTTT +
Preference number: 4 (lower is better)
Translates to: GVAKPSTLQDEELSPLNSQLGDP*AGPGSF
Trigger: AAACGAACCCGGGCCAGCGCAAGGATCTCCGAGTTG...GCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCAGATCCTGGGAAACCTaGACTGCCAGCCTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSRSWET*TASLSF
Trigger: AAAGGACAGGCTGGCAGTGCAGGTTTCCCAGGATCT...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615285.4
CDS-3UTR CCA 90 bp AGTTTTGTGGCTGGGTTGAGAGGCACTACCCTGCCTGAGCTACTGTGCAGCATGAGCATTGTAATCTGCTaGCTGGGAGGGATGTTCTTG +
Preference number: 4 (lower is better)
Translates to: SFVAGLRGTTLPELLCSMSIVIC*LGGMFL
Trigger: CAAGAACATCCCTCCCAGCCAGCAGATTACAATGCT...CATGCTGCACAGTAGCTCAGGCAGGGTAGTGCCTCTCAACCCAGCCACAAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp CAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTGCATCTCCTGCCACTTaGCATAAGAAGAATTTGGAC +
Preference number: 4 (lower is better)
Translates to: QLWPWWSCQVLPKGALIFASPAT*HKKNLD
Trigger: GTCCAAATTCTTCTTATGCCAAGTGGCAGGAGATGC...AAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTGAACTCCTGTGGGGTTaGCGCATTCTTGAACATGAG +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAELLWG*RILEHE
Trigger: CTCATGTTCAAGAATGCGCCAACCCCACAGGAGTTC...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTATATTCTGCCTGGCCTaGATGGTAGGTGGCACATTC +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAIFCLA*MVGGTF
Trigger: GAATGTGCCACCTACCATCCAGGCCAGGCAGAATAT...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTCGGACTGGCCGAGGTTaGCGGTGGCATTCACAATAT +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLRTGRG*RWHSQY
Trigger: ATATTGTGAATGCCACCGCCAACCTCGGCCAGTCCG...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTCCTTTGTCCAGCTCATaGTGGGCTCTGGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLPLSSS*WALGSL
Trigger: AAGGCTTCCCAGAGCCCACCATGAGCTGGACAAAGG...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp AGCACACACACTGATATTACCAAGCAGGATTCAGCCCTGAGTCTCCACAAGGGACCTTTGTCCAGCTCATaGTGGGCTCTGGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: STHTDITKQDSALSLHKGPLSSS*WALGSL
Trigger: AAGGCTTCCCAGAGCCCACCATGAGCTGGACAAAGG...TCCCTTGTGGAGACTCAGGGCTGAATCCTGCTTGGTAATATCAGTGTGTGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp CAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTTTTGATGGTCAGCTaGGAACTATCGTCGCTGAAG +
Preference number: 4 (lower is better)
Translates to: QLWPWWSCQVLPKGALIFFLMVS*ELSSLK
Trigger: CTTCAGCGACGATAGTTCCCAGCTGACCATCAAAAA...AAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTG
52% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTGGGAGTCCTGGCCGATaGTGTTGCTGGCGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPGSPGR*CCWRCR
Trigger: TCTGCACCGCCAGCAACACCATCGGCCAGGACTCCC...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTGGGAGTCCTGGCCGATaGTGTTGCTGGCGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFGSPGR*CCWRCR
Trigger: TCTGCACCGCCAGCAACACCATCGGCCAGGACTCCC...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTATGAGATCGTGGCACTaGGATAGGCAAATACCTCGC +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAMRSWH*DRQIPR
Trigger: GCGAGGTATTTGCCTATCCCAGTGCCACGATCTCAT...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AAAGCCATTCTGTGGGTCACTGCTGAACCACGGCCCCACTCTGTGCTGATCTGCGAAACCATGAGATCGTaGCACTGGGATAGGCAAATA +
Preference number: 4 (lower is better)
Translates to: KAILWVTAEPRPHSVLICETMRS*HWDRQI
Trigger: TATTTGCCTATCCCAGTGCCACGATCTCATGGTTTC...GCAGATCAGCACAGAGTGGGGCCGTGGTTCAGCAGTGACCCACAGAATGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAAGCTGTAATTGGAGCTTaGCAGCAGCTGGCCATCCCG +
Preference number: 4 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCEAVIGA*QQLAIP
Trigger: CGGGATGGCCAGCTGCTGCCAAGCTCCAATTACAGC...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTGCTCCACCTGGTCGATaGATGGTGAAGAGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFAPPGR*MVKRGC
Trigger: ACACCCCCTCTTCACCATCCATCGACCAGGTGGAGC...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTGAGTATGGCTCCACCTaGTCGATGGATGGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWAEYGST*SMDGEE
Trigger: CTCTTCACCATCCATCGACCAGGTGGAGCCATACTC...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTAGCACCTGGGCTGTGCTaGAGTATGGCTCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLAPGLC*SMAPPG
Trigger: ACCAGGTGGAGCCATACTCCAGCACAGCCCAGGTGC...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTCGGGAGCCTGATCTCTaGTTTCCACTCGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFREPDL*FPLGGE
Trigger: CTCTCCTCCGAGTGGAAACCAGAGATCAGGCTCCCG...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000401611.6
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTGGGATGGCTGTGGGCTaGGCCGAGGTCCTGAACACA +
Preference number: 4 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELGMAVG*AEVLNT
Trigger: TGTGTTCAGGACCTCGGCCCAGCCCACAGCCATCCC...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTGGGGCTGCCGTTGGCTaGGATGGCTGTGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFGAAVG*DGCGLG
Trigger: GCCCAGCCCACAGCCATCCCAGCCAACGGCAGCCCC...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTTTCGAACCTCCACGATaGGCTCCTTGGACTCATCTT +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAFEPPR*APWTHL
Trigger: AAGATGAGTCCAAGGAGCCCATCGTGGAGGTTCGAA...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GGTGTGGCAAAGCCATCGACATTACAAGATGAAGAACTGAGTCCACTGAACAGCTGTCTCCTGGCACTCTaGCTTTGCTTCTACGGGGCC +
Preference number: 4 (lower is better)
Translates to: GVAKPSTLQDEELSPLNSCLLAL*LCFYGA
Trigger: GGCCCCGTAGAAGCAAAGCCAGAGTGCCAGGAGACA...GCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCTCTCCTTTGTCTGTGTaGCGTCATTGGGGACCGTCT +
Preference number: 4 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSSPLSV*RHWGPS
Trigger: AGACGGTCCCCAATGACGCCACACAGACAAAGGAGA...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCGTGTGTGTGTCTGTaGTGTTGGAAATGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAACVCL*CWKCSG
Trigger: ACCAGAGCATTTCCAACACCACAGACACACACACGC...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCACAGATGCAGGCAGGTaGCGGCTAATCAGAAAGTGG +
Preference number: 4 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSTDAGR*RLIRKW
Trigger: CCACTTTCTGATTAGCCGCCACCTGCCTGCATCTGT...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGGCATGGGCTTGGCCTaGTGTGGCAAAGCCATCGAC +
Preference number: 4 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSGMGLA*CGKAID
Trigger: GTCGATGGCTTTGCCACACCAGGCCAAGCCCATGCC...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCAGTCTTGACAAGGTATaGCATGGGCTTGGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSSLDKV*HGLGLV
Trigger: CACCAGGCCAAGCCCATGCCATACCTTGTCAAGACT...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCTCCTCCAGCAGAACTTaGCCATGCCGGTCTTCATGT +
Preference number: 4 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSSSSRT*PCRSSC
Trigger: ACATGAAGACCGGCATGGCCAAGTTCTGCTGGAGGA...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCCCTGCAGGGTCCAGTaGCCCTGCTCGTCACACTTG +
Preference number: 4 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFPCRVQ*PCSSHL
Trigger: CAAGTGTGACGAGCAGGGCCACTGGACCCTGCAGGG...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTCAGCTGTGGCCATGGTaGTCCTGCCAGGTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFQLWPW*SCQVLP
Trigger: TGGAAGAACCTGGCAGGACCACCATGGCCACAGCTG...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp CCACTGCCCTGGTGTGAAGCGCCATCTGGGACTCCAGCGGGGAGAGTTTTGTGGAAACTCCTTATGAAGTaGCACAAAAGTATCTGTGAG +
Preference number: 4 (lower is better)
Translates to: PLPWCEAPSGTPAGRVLWKLLMK*HKSICE
Trigger: CTCACAGATACTTTTGTGCCACTTCATAAGGAGTTT...CCACAAAACTCTCCCCGCTGGAGTCCCAGATGGCGCTTCACACCAGGGCAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTCAAAAGAAGAGTCACTaGGATGGCTGTGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLQKKSH*DGCGLG
Trigger: GCCCAGCCCACAGCCATCCCAGTGACTCTTCTTTTG...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000524916.1
CDS-3UTR CCA 90 bp GTGGATGCTTCCAACCTGTCCTGTAGACTGATGCTCAAAGCCATTCTGTGGGTCCTTGTTGGCACATCATaGCTTGGCCCCGTTCACAGA +
Preference number: 4 (lower is better)
Translates to: VDASNLSCRLMLKAILWVLVGTS*LGPVHR
Trigger: TCTGTGAACGGGGCCAAGCCATGATGTGCCAACAAG...GACCCACAGAATGGCTTTGAGCATCAGTCTACAGGACAGGTTGGAAGCATCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp ATCCACTCCCAACACAGCTTGCTTGCTCATCCTAAAATGATACTATTGCTAAGTAGTGTGGACGGCGGCTaGGCGACAGACCTAGGGGCA +
Preference number: 4 (lower is better)
Translates to: IHSQHSLLAHPKMILLLSSVDGG*ATDLGA
Trigger: TGCCCCTAGGTCTGTCGCTCAGCCGCCGTCCACACT...ACTTAGCAATAGTATCATTTTAGGATGAGCAAGCAAGCTGTGTTGGGAGTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR TCA 90 bp AGTTGCCCATCATGTCAGCAAAACGCTCATGTGAATCAGTGCGGTCTGGCTCTTGAAAGATCTTCACGTTaGCGGTGGCCTCTGACTCAC +
Preference number: 4 (lower is better)
Translates to: SCPSCQQNAHVNQCGLALERSSR*RWPLTH
Trigger: GTGAGTCAGAGGCCACCGTCAACGTGAAGATCTTTC...AAGAGCCAGACCGCACTGATTCACATGAGCGTTTTGCTGACATGATGGGCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp TCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTTGAACATGAGCTTCTaGAAGATCTTCACGTTGACG +
Preference number: 4 (lower is better)
Translates to: SSTQNGCSAAVAMVVLPGLNMSF*KIFTLT
Trigger: CGTCAACGTGAAGATCTTTCAGAAGCTCATGTTCAA...ACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTGGTGGGAGGGAGCTaGCCACATCACACACAATCA +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLLVGGS*PHHTQS
Trigger: TGATTGTGTGTGATGTGGTCAGCTCCCTCCCACCAA...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTCTTTGTGTTTCCAGATaGTGGTTGGTGGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLLCVSR*WLVGGS
Trigger: GCTCCCTCCCACCAACCATCATCTGGAAACACAAAG...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGGGAACTATCGTCGCTaGAGATGTACTTCTCATCGT +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAGNYRR*RCTSHR
Trigger: ACGATGAGAAGTACATCTTCAGCGACGATAGTTCCC...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTGGGAACTATCGTCGCTaGAGATGTACTTCTCATCGT +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAGNYRR*RCTSHR
Trigger: ACGATGAGAAGTACATCTTCAGCGACGATAGTTCCC...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CGCCAACATAGGTGGCTTTGCCCCTCAGACCACAGCATGGGATCATTTGGAATCGGGAACTATCGTCGCTaGAGATGTACTTCTCATCGT +
Preference number: 4 (lower is better)
Translates to: RQHRWLCPSDHSMGSFGIGNYRR*RCTSHR
Trigger: ACGATGAGAAGTACATCTTCAGCGACGATAGTTCCC...GATTCCAAATGATCCCATGCTGTGGTCTGAGGGGCAAAGCCACCTATGTTGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp GAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGTCTTATCCACCTTTTTaGTGGTCAGCTGGGAACTAT +
Preference number: 4 (lower is better)
Translates to: EWLLSSCGHGGPARFFQRSYPPF*WSAGNY
Trigger: ATAGTTCCCAGCTGACCATCAAAAAGGTGGATAAGA...CCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTGGTTCTCTACATATGTaGTTTTGGGTTTTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: GENAWEQIPFHRCRQVAAGSLHM*FWVLQR
Trigger: TCTTTGCAAAACCCAAAATCACATATGTAGAGAACC...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTGCCATCCCGAAACCATaGGATCGTGGCACTGGGATA +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFAIPKP*DRGTGI
Trigger: TATCCCAGTGCCACGATCTCATGGTTTCGGGATGGC...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAAGCCATCCCGAAACCATaGGATCGTGGCACTGGGATA +
Preference number: 4 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCEAIPKP*DRGTGI
Trigger: TATCCCAGTGCCACGATCTCATGGTTTCGGGATGGC...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTCTGGTCGATGGATGGTaGAGAGGGGGTGTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSLVDGW*RGGVCL
Trigger: CAAGCAGACACCCCCTCTTCACCATCCATCGACCAG...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCACTCGGAGGCCGCGCTaGTCTCACCCAGCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: VVSMFHLVKSFITREKAPTRRPR*SHPALC
Trigger: GCAAAGGGCTGGGTGAGATCAGCGCGGCCTCCGAGT...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATCCAGGGACTTCAGCATaGCGTGGTCACTGCCAGACG +
Preference number: 4 (lower is better)
Translates to: PGSHILLCALRSLFMFLYPGTSA*RGHCQT
Trigger: CGTCTGGCAGTGACCACGTCATGCTGAAGTCCCTGG...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGTCCTGAACACAAAATaGGCCGCCTTGGATTTTCCT +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAVLNTK*AALDFP
Trigger: AGGAAAATCCAAGGCGGCTCATTTTGTGTTCAGGAC...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAACCCGGTGCTCAGGCCTaGGGTGGGGCTGCCGTTGGC +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKPGAQA*GGAAVG
Trigger: GCCAACGGCAGCCCCACCTCAGGCCTGAGCACCGGG...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTAGATGGATTTTCACCTaGGTGGGACCCAGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEARWIFT*VGPRQK
Trigger: TTTTTGCCTGGGTCCCACTCAGGTGAAAATCCATCT...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTAAGACACTAATTCCCTaGAGCACACATGCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAKTLIP*STHALP
Trigger: CGGAAGAGCATGTGTGCTTCAGGGAATTAGTGTCTT...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTACCTGCTCGTCACACTTaGGTGCTCCTCCAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLPARHT*VLLQQN
Trigger: GTTCTGCTGGAGGAGCACTCAAGTGTGACGAGCAGG...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp AGCTCTCCCACACTGACCTGGGATCCTTATGCTCTGCCCTGTGCCCAAAAACCATGCAGAGAAAAGCAATaGGACAAAGGTGTAGGATGC +
Preference number: 4 (lower is better)
Translates to: SSPTLTWDPYALPCAQKPCREKQ*DKGVGC
Trigger: GCATCCTACACCTTTGTCTCATTGCTTTTCTCTGCA...TGGTTTTTGGGCACAGGGCAGAGCATAAGGATCCCAGGTCAGTGTGGGAGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp GCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTATGAGATATGTAGAATaGTATGTGACCACAATGGGG +
Preference number: 4 (lower is better)
Translates to: AAVAMVVLPGSSKGGTDLMRYVE*YVTTMG
Trigger: CCCCATTGTGGTCACATATCATTCTACATATCTCAT...AAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp AGGGAGGACAAGGAGCACAGAGTTAGAATGAGGGGAATGTGTGGTGATTTTAACGACCCTGGGATGTGTTaGGATGACAGGGCCACGTCA +
Preference number: 4 (lower is better)
Translates to: REDKEHRVRMRGMCGDFNDPGMC*DDRATS
Trigger: TGACGTGGCCCTGTCATCTCAACACATCCCAGGGTC...GTTAAAATCACCACACATTCCCCTCATTCTAACTCTGTGCTCCTTGTCCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp AGCTCTCCCACACTGACCTGGGATCCTTATGCTCTGCCCTGTGCCCAAAAACCACTAGGGGCAGACAATTaGCAGGCTGAGTATGATTAT +
Preference number: 4 (lower is better)
Translates to: SSPTLTWDPYALPCAQKPLGADN*QAEYDY
Trigger: ATAATCATACTCAGCCTGGCAATTGTCTGCCCCTAG...TGGTTTTTGGGCACAGGGCAGAGCATAAGGATCCCAGGTCAGTGTGGGAGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTGGGAGGGATGTTCTTaGCGCGGTAAATTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLWEGCS*RGKFCA
Trigger: GGCACAGAATTTACCGCGGCAAGAACATCCCTCCCA...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp TGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGTGCAGCATTGTAATCTaGTGGCTGGGAGGGATGTTC +
Preference number: 4 (lower is better)
Translates to: WSCQVLPKGALIFFIGTGCSIVI*WLGGMF
Trigger: GAACATCCCTCCCAGCCAGCAGATTACAATGCTGCA...CCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp AACATAGGTGGCTTTGCCCCTCAGACCACAGCATGGGATCATTTGGAATCCCAAACCACTGAGATCCGCTaGTGGTTTGGGGTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: NIGGFAPQTTAWDHLESQTTEIR*WFGVSF
Trigger: AAAGCTCACCCCAAACCAGCAGCGGATCTCAGTGGT...TTGGGATTCCAAATGATCCCATGCTGTGGTCTGAGGGGCAAAGCCACCTATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp AGTTGCCCATCATGTCAGCAAAACGCTCATGTGAATCAGTGCGGTCTGGCTCTTCCACACACTTGTAAATaGCGGCGTCGTCGATGTTGG +
Preference number: 4 (lower is better)
Translates to: SCPSCQQNAHVNQCGLALPHTCK*RRRRCW
Trigger: CCAACATCGACGACGCCGGCATTTACAAGTGTGTGG...AAGAGCCAGACCGCACTGATTCACATGAGCGTTTTGCTGACATGATGGGCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCATTCACAATATTCTaGCTGGCCTGGATGGTAGGT +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAAFTIF*LAWMVG
Trigger: ACCTACCATCCAGGCCAGGCAGAATATTGTGAATGC...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTCCTTGTTCTCAGCAATaGAGATGTACTCAGCCTCGT +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAPCSQQ*RCTQPR
Trigger: ACGAGGCTGAGTACATCTGCATTGCTGAGAACAAGG...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTCAGGTAAGAGTGACCTaGTCCTCTAATTCCATGGCA +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAQVRVT*SSNSMA
Trigger: TGCCATGGAATTAGAGGAGCAGGTCACTCTTACCTG...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GGTGTGGCAAAGCCATCGACATTACAAGATGAAGAACTGAGTCCACTGAACAGCTGGTGTTGCTGGCGGTaGAGATGTACTCTCCGGCAT +
Preference number: 4 (lower is better)
Translates to: GVAKPSTLQDEELSPLNSWCCWR*RCTLRH
Trigger: ATGCCGGAGAGTACATCTGCACCGCCAGCAACACCA...GCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GGCTGGGGCATTCAGGAAGCACTGACAGGTTGGCTCGGCCCCAATTTATTAACCAGCTTTGGGGCATATTaGACTTCAAGGTACATGGAC +
Preference number: 4 (lower is better)
Translates to: GWGIQEALTGWLGPNLLTSFGAY*TSRYMD
Trigger: GTCCATGTACCTTGAAGTGCAATATGCCCCAAAGCT...GGTTAATAAATTGGGGCCGAGCCAACCTGTCAGTGCTTCCTGAATGCCCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTAATTCCAAGGACTCCTaGCCAATGCGGTTCACTGCA +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWANSKDS*PMRFTA
Trigger: TGCAGTGAACCGCATTGGGCAGGAGTCCTTGGAATT...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCAATTCCAAGGACTCCTaGCCAATGCGGTTCACTGCA +
Preference number: 4 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSNSKDS*PMRFTA
Trigger: TGCAGTGAACCGCATTGGGCAGGAGTCCTTGGAATT...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGAATTCCAAGGACTCCTaGCCAATGCGGTTCACTGCA +
Preference number: 4 (lower is better)
Translates to: WSCQVLPKGALIFFIGTGNSKDS*PMRFTA
Trigger: TGCAGTGAACCGCATTGGGCAGGAGTCCTTGGAATT...CCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp CAGACACCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTACTGCACCTGGGCTGTaGTGGAGTATGGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: QTPRLSHSTVCSKISLHVTAPGL*WSMAPP
Trigger: AGGTGGAGCCATACTCCAGCACAGCCCAGGTGCAGT...AACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGGTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp AACATAGGTGGCTTTGCCCCTCAGACCACAGCATGGGATCATTTGGAATCCCAATCTGGTTCATCAAACTaGACCTGGGCTGTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: NIGGFAPQTTAWDHLESQSGSSN*TWAVLE
Trigger: CTCCAGCACAGCCCAGGTGCAGTTTGATGAACCAGA...TTGGGATTCCAAATGATCCCATGCTGTGGTCTGAGGGGCAAAGCCACCTATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp TTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTACTTCTTCACCAACTaGTCTCCACTCAGCTTTGTA +
Preference number: 4 (lower is better)
Translates to: FHTEWLLSSCGHGGPARFYFFTN*SPLSFV
Trigger: TACAAAGCTGAGTGGAGAGCAGTTGGTGAAGAAGTA...GAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTCCCTTCGAGCTTAGGTaGACTGGGTTCCCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSPFELR*TGFPLD
Trigger: GTCCAAGGGGAACCCAGTGCACCTAAGCTCGAAGGG...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316851.12
CDS-3UTR GCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTCCATCCTCTCCCATCTaGCCTTCGAGCTTAGGTGCA +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFPSSPI*PSSLGA
Trigger: TGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGG...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTGAGCCGCCGTCATCCTaGTTGATCAGGTTCACTTTA +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWAEPPSS*LIRFTL
Trigger: TAAAGTGAACCTGATCAAGCAGGATGACGGCGGCTC...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp TGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGGAGCCGCCGTCATCCTaGTTGATCAGGTTCACTTTA +
Preference number: 4 (lower is better)
Translates to: WSCQVLPKGALIFFIGTGEPPSS*LIRFTL
Trigger: TAAAGTGAACCTGATCAAGCAGGATGACGGCGGCTC...CCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTACTGGCACTCTGGCTTTaGTTCTACGGGGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLLALWL*FYGALL
Trigger: GAGAAGGGCCCCGTAGAAGCAAAGCCAGAGTGCCAG...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTACCCAGAGGCAGCCTTaGCACCCTAACCTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSTQRQP*HPNLLL
Trigger: CAGCAAGAGGTTAGGGTGGCAAGGCTGCCTCTGGGT...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CAGACACCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTACCCAGAGGCAGCCTTaGCACCCTAACCTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: QTPRLSHSTVCSKISLHVTQRQP*HPNLLL
Trigger: CAGCAAGAGGTTAGGGTGGCAAGGCTGCCTCTGGGT...AACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGGTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GGGGCCAGGGCTGTGTGTTCTGGGATCCTCCATTTCCATCCCCAGGAGCTGAGATCACATTCTACTGTGTaGTCTAAGATCTCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: GARAVCSGILHFHPQELRSHSTV*SKISLH
Trigger: ATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGA...TCTCAGCTCCTGGGGATGGAAATGGAGGATCCCAGAACACACAGCCCTGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTGAGCCTGCCCCTCACTaGTGGGCCCTCCCGGTCTCA +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFEPAPH*WALPVS
Trigger: TGAGACCGGGAGGGCCCAGCAGTGAGGGGCAGGCTC...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTAGCAGAACTTGGCCATaGCGGTCTTCATGTGAATAC +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAASRTWP*RSSCEY
Trigger: GTATTCACATGAAGACCGGCATGGCCAAGTTCTGCT...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCCCTTCGAGCTTAGGTaGACTGGGTTCCCGGACTGG +
Preference number: 4 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFPFELR*TGFPDW
Trigger: CCAGTCCGGGAACCCAGTGCACCTAAGCTCGAAGGG...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533073.5
CDS-3UTR GCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTGTTTCAGCTGAGGCCTaGCTGACCCTGGGATGTGTT +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFVSAEA*LTLGCV
Trigger: AACACATCCCAGGGTCAGGCAGGCCTCAGCTGAAAC...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp ACGTTTAGCAATTTGGGAAAACCAACGAGAGATGTCATTTGCATTGCTTTTGAGCCCCTGCAGCGAGTGTaGACGGCGGCTGAGCGACAG +
Preference number: 4 (lower is better)
Translates to: TFSNLGKPTRDVICIAFEPLQRV*TAAERQ
Trigger: CTGTCGCTCAGCCGCCGTCCACACTCGCTGCAGGGG...CTCAAAAGCAATGCAAATGACATCTCTCGTTGGTTTTCCCAAATTGCTAAACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTAGCATTGTAATCTGCTaGCTGGGAGGGATGTTCTTG +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEASIVIC*LGGMFL
Trigger: CAAGAACATCCCTCCCAGCCAGCAGATTACAATGCT...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ACGAGGACTGAAAGCACATCCCAGAACGTTCATCAGCCCCAGAAAATATCCAACACGCTGATCTCCCCCTaGCTGGGAACAATATCCACC +
Preference number: 4 (lower is better)
Translates to: TRTESTSQNVHQPQKISNTLISP*LGTIST
Trigger: GGTGGATATTGTTCCCAGCCAGGGGGAGATCAGCGT...GTTGGATATTTTCTGGGGCTGATGAACGTTCTGGGATGTGCTTTCAGTCCTCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTGAACTCCTGTGGGGTTaGCGCATTCTTGAACATGAG +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWAELLWG*RILEHE
Trigger: CTCATGTTCAAGAATGCGCCAACCCCACAGGAGTTC...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTCTCCCGGAACTCCTGTaGGGTTGGCGCATTCTTGAA +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFLPELL*GWRILE
Trigger: TTCAAGAATGCGCCAACCCCACAGGAGTTCCGGGAG...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTATATTCTGCCTGGCCTaGATGGTAGGTGGCACATTC +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWAIFCLA*MVGGTF
Trigger: GAATGTGCCACCTACCATCCAGGCCAGGCAGAATAT...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp CCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAATATTCTGCCTGGCCTaGATGGTAGGTGGCACATTC +
Preference number: 4 (lower is better)
Translates to: PWWSCQVLPKGALIFFIGIFCLA*MVGGTF
Trigger: GAATGTGCCACCTACCATCCAGGCCAGGCAGAATAT...TCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAACGGACTGGCCGAGGTTaGCGGTGGCATTCACAATAT +
Preference number: 4 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCERTGRG*RWHSQY
Trigger: ATATTGTGAATGCCACCGCCAACCTCGGCCAGTCCG...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GAGCGCTGGGGATTAATGGCGAGCGCCAACATAGGTGGCTTTGCCCCTCAGACCAATTCCATGGCAGTCTaGTTCTCTACATATGTGATT +
Preference number: 4 (lower is better)
Translates to: ERWGLMASANIGGFAPQTNSMAV*FSTYVI
Trigger: AATCACATATGTAGAGAACCAGACTGCCATGGAATT...GGTCTGAGGGGCAAAGCCACCTATGTTGGCGCTCGCCATTAATCCCCAGCGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTTCAAGGTACATGGACTaGGAGTCCTGGCCGATGGTG +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFSRYMD*ESWPMV
Trigger: CACCATCGGCCAGGACTCCCAGTCCATGTACCTTGA...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGCAGGTGATGTTCACCTaGTTCCCCTCCCAAGTGTAC +
Preference number: 4 (lower is better)
Translates to: NKREGPRSTECWVGMLMEQVMFT*FPSQVY
Trigger: GTACACTTGGGAGGGGAACCAGGTGAACATCACCTG...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTAGCTGTAATTGGAGCTTaGCAGCAGCTGGCCATCCCG +
Preference number: 4 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLAVIGA*QQLAIP
Trigger: CGGGATGGCCAGCTGCTGCCAAGCTCCAATTACAGC...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTCACCTCCAGATAGCTaGCAGAGGGGGTGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLSPPDS*QRGCCR
Trigger: TCTACAACACCCCCTCTGCCAGCTATCTGGAGGTGA...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTATCATTCTCAGAGTCTaGGGTCACCTCCAGATAGCT +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAIILRV*GHLQIA
Trigger: AGCTATCTGGAGGTGACCCCAGACTCTGAGAATGAT...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGGAGTATGGCTCCACCTaGTCGATGGATGGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: NKREGPRSTECWVGMLMEEYGST*SMDGEE
Trigger: CTCTTCACCATCCATCGACCAGGTGGAGCCATACTC...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGAGTATGGCTCCACCTaGTCGATGGATGGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: WWSCQVLPKGALIFFIGTEYGST*SMDGEE
Trigger: CTCTTCACCATCCATCGACCAGGTGGAGCCATACTC...AGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTGCACCTGGGCTGTGCTaGAGTATGGCTCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPAPGLC*SMAPPG
Trigger: ACCAGGTGGAGCCATACTCCAGCACAGCCCAGGTGC...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AGTTGCCCATCATGTCAGCAAAACGCTCATGTGAATCAGTGCGGTCTGGCTCTTTCATCAAACTGCACCTaGGCTGTGCTGGAGTATGGC +
Preference number: 4 (lower is better)
Translates to: SCPSCQQNAHVNQCGLALSSNCT*AVLEYG
Trigger: GCCATACTCCAGCACAGCCCAGGTGCAGTTTGATGA...AAGAGCCAGACCGCACTGATTCACATGAGCGTTTTGCTGACATGATGGGCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp AAAGCCATTCTGTGGGTCACTGCTGAACCACGGCCCCACTCTGTGCTGATCTGCTGGCATCATACCACTTaGAATGCCATACTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: KAILWVTAEPRPHSVLICWHHTT*NAILLH
Trigger: GTGAAGAAGTATGGCATTCCAAGTGGTATGATGCCA...GCAGATCAGCACAGAGTGGGGCCGTGGTTCAGCAGTGACCCACAGAATGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTCGGGAGCCTGATCTCTaGTTTCCACTCGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSREPDL*FPLGGE
Trigger: CTCTCCTCCGAGTGGAAACCAGAGATCAGGCTCCCG...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTAGACTTCAGCATGACGTaGTCACTGCCAGACGGGAGC +
Preference number: 4 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLDFSMT*SLPDGS
Trigger: GCTCCCGTCTGGCAGTGACCACGTCATGCTGAAGTC...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGTGCCGTTGGCTGGGATaGCTGTGGGCTGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLCRWLG*LWAGPR
Trigger: CCTCGGCCCAGCCCACAGCCATCCCAGCCAACGGCA...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAGACACCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTGTGGCGTGGTCTCGTTaGGCTCTGTGTGTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: QTPRLSHSTVCSKISLHVVAWSR*ALCVSL
Trigger: GAGGGAAACACACAGAGCCCAACGAGACCACGCCAC...AACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGGTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACACTCGGGCTCCGTCAGTaGCGTGGTCTCGTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTLGLRQ*RGLVGL
Trigger: GAGCCCAACGAGACCACGCCACTGACGGAGCCCGAG...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTTGTCTCCTGGCACTCTaGCTTTGCTTCTACGGGGCC +
Preference number: 4 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSCLLAL*LCFYGA
Trigger: GGCCCCGTAGAAGCAAAGCCAGAGTGCCAGGAGACA...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTTTCGTTTCTGTCTCCTaGCACTCTGGCTTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAFVSVS*HSGFAS
Trigger: AGAAGCAAAGCCAGAGTGCCAGGAGACAGAAACGAA...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAGACACCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTGACTTCGGCTGGCGCTaGCTTCGTTTCTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: QTPRLSHSTVCSKISLHVDFGWR*LRFCLL
Trigger: CAGGAGACAGAAACGAAGCCAGCGCCAGCCGAAGTC...AACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGGTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGTGTGTCTGTGGTGTTaGAAATGCTCTGGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAVCLWC*KCSGEA
Trigger: AGCTTCACCAGAGCATTTCCAACACCACAGACACAC...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTGTGTGTCTGTGGTGTTaGAAATGCTCTGGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAVCLWC*KCSGEA
Trigger: AGCTTCACCAGAGCATTTCCAACACCACAGACACAC...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTGGCATGGGCTTGGCCTaGTGTGGCAAAGCCATCGAC +
Preference number: 4 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELGMGLA*CGKAID
Trigger: GTCGATGGCTTTGCCACACCAGGCCAAGCCCATGCC...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATGGCATGGGCTTGGCCTaGTGTGGCAAAGCCATCGAC +
Preference number: 4 (lower is better)
Translates to: PGSHILLCALRSLFMFLYGMGLA*CGKAID
Trigger: GTCGATGGCTTTGCCACACCAGGCCAAGCCCATGCC...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCCAGGGGCTTGTCCACTaGCCCCAGCGGCGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFIQGLVH*PQRREQ
Trigger: CTGCTCCCGCCGCTGGGGCCAGTGGACAAGCCCCTG...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR CCA 90 bp TGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAATCTGGTGGAGACAATaGAACAGGGGTAGACGAGCT +
Preference number: 4 (lower is better)
Translates to: WPWWSCQVLPKGALIFFIIWWRQ*NRGRRA
Trigger: AGCTCGTCTACCCCTGTTCCATTGTCTCCACCAGAT...TATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TCCCACACAGCTTTGATGCTTGAACACTATGAACATGCACGCATACTCATATGGGTTGCTCAGCAGCTGTaGCCATGGTGGTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SHTALMLEHYEHARILIWVAQQL*PWWSCQ
Trigger: CTGGCAGGACCACCATGGCCACAGCTGCTGAGCAAC...CCATATGAGTATGCGTGCATGTTCATAGTGTTCAAGCATCAAAGCTGTGTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR CCA 90 bp TGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGGGGAGTCACCCCGATTaGGAGACAAACACCTTTCAA +
Preference number: 4 (lower is better)
Translates to: WSCQVLPKGALIFFIGTGGSHPD*ETNTFQ
Trigger: TTGAAAGGTGTTTGTCTCCCAATCGGGGTGACTCCC...CCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp GGGAGTTTTTATTCAGTAGAAGGTCCATCCCCAAGCACACACACTGATATTACCTTAACCCTCCTGGGCTaGGCAGTCTGGGAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: GSFYSVEGPSPSTHTDITLTLLG*AVWEWP
Trigger: AGGCCACTCCCAGACTGCCCAGCCCAGGAGGGTTAA...GGTAATATCAGTGTGTGTGCTTGGGGATGGACCTTCTACTGAATAAAAACTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTCACCAATACAGAGGCTaGGGCATTCAGGAAGCACTG +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLHQYRG*GIQEAL
Trigger: CAGTGCTTCCTGAATGCCCCAGCCTCTGTATTGGTG...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp CAGTGCGGTCTGGCTCTTTTAACATGGGCACTTAAATGCTTAATTGCAAGCAAAACTGCCCCTCTCCTGTaGGTGGTCCTGGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: QCGLALLTWALKCLIASKTAPLL*VVLGSG
Trigger: CCCTGATCCCAGGACCACCCACAGGAGAGGGGCAGT...TTTGCTTGCAATTAAGCATTTAAGTGCCCATGTTAAAAGAGCCAGACCGCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp TGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGTCCCTTCAGAAAGATaGACACTGCCCCTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: WWSCQVLPKGALIFFIGTVPSER*TLPLSC
Trigger: ACAGGAGAGGGGCAGTGTCCATCTTTCTGAAGGGAC...AGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp GTCCTCTCCACACTTAGGACGAGATCTCCAAAGGGTCCCTTCAGAAAGATGGACCACTGTTACAAGCCGTaGGTCTGTCTAAATGGGACC +
Preference number: 4 (lower is better)
Translates to: VLSTLRTRSPKGPFRKMDHCYKP*VCLNGT
Trigger: GGTCCCATTTAGACAGACCCACGGCTTGTAACAGTG...GTCCATCTTTCTGAAGGGACCCTTTGGAGATCTCGTCCTAAGTGTGGAGAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp CAGTGCGGTCTGGCTCTTTTAACATGGGCACTTAAATGCTTAATTGCAAGCAAACAGGGCACAGGGGAGTaGGGTGTGGCTGAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: QCGLALLTWALKCLIASKQGTGE*GVAEQG
Trigger: ACCTTGCTCAGCCACACCCCACTCCCCTGTGCCCTG...TTTGCTTGCAATTAAGCATTTAAGTGCCCATGTTAAAAGAGCCAGACCGCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTACGGAGATCCTTGCGCTaGCCCGGGTTCGTTTTGATG +
Preference number: 4 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLRRSLR*PGFVLM
Trigger: CATCAAAACGAACCCGGGCCAGCGCAAGGATCTCCG...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTGGGTTCCCCTGGGACTaGCTGCGTCTTGAACTCGGA +
Preference number: 4 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFGFPWD*LRLELG
Trigger: TCCGAGTTCAAGACGCAGCCAGTCCCAGGGGAACCC...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTGGGTTCCCCTTTAGCTaGTTCTGTGGTTGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFGFPFS*FCGCKG
Trigger: GCCCTTGCAACCACAGAACCAGCTAAAGGGGAACCC...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000621850.4
3UTR CAA 72 bp AACCAGTTTGACCTAACCACAACCACTTTGACAGTCTaGACAAGGTATGGCATGGGCTTGGCCTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: NQFDLTTTTLTV*TRYGMGLAWCG
Trigger: GCCACACCAGGCCAAGCCCATGCCATACCTTGTCAAGACTGTCAAAGTGGTTGTGGTTAGGTCAAACTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR CAA 72 bp GGTCCTGAACACAAAATGAGCCGCCTTGGATTTTCCTaGCTGGTTCTCAGCCACCACGTAGACCTCATACTC +
Preference number: 4 (lower is better)
Translates to: GPEHKMSRLGFS*LVLSHHVDLIL
Trigger: GAGTATGAGGTCTACGTGGTGGCTGAGAACCAGCAAGGAAAATCCAAGGCGGCTCATTTTGTGTTCAGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR TCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTATCATTCCACACCACTaGGATCCGCTGCTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFIIPHH*DPLLVW
Trigger: CCAAACCAGCAGCGGATCTCAGTGGTGTGGAATGAT...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp GGTGTGGCAAAGCCATCGACATTACAAGATGAAGAACTGAGTCCACTGAACAGCATCATTCCACACCACTaGGATCCGCTGCTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: GVAKPSTLQDEELSPLNSIIPHH*DPLLVW
Trigger: CCAAACCAGCAGCGGATCTCAGTGGTGTGGAATGAT...GCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTGAAAGATCTTCACGTTaGCGGTGGCCTCTGACTCAC +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFERSSR*RWPLTH
Trigger: GTGAGTCAGAGGCCACCGTCAACGTGAAGATCTTTC...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAAGAAAGATCTTCACGTTaGCGGTGGCCTCTGACTCAC +
Preference number: 4 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCEERSSR*RWPLTH
Trigger: GTGAGTCAGAGGCCACCGTCAACGTGAAGATCTTTC...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAATTGGTGGGAGGGAGCTaGCCACATCACACACAATCA +
Preference number: 4 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCELVGGS*PHHTQS
Trigger: TGATTGTGTGTGATGTGGTCAGCTCCCTCCCACCAA...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTCCTCATCTGTTTTCTTaGTGCCCCGGATCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFPHLFS*CPGSAG
Trigger: ACCTGCAGATCCGGGGCATCAAGAAAACAGATGAGG...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTCTGCTTGAACAAGGATaGATTCCAAGGACTCCTGCC +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLLLEQG*IPRTPA
Trigger: GGCAGGAGTCCTTGGAATTCATCCTTGTTCAAGCAG...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTGAGGGGGTGTCTGCTTaGACAAGGATGAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLEGVSA*TRMNSK
Trigger: CTTGGAATTCATCCTTGTTCAAGCAGACACCCCCTC...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATCTGGTCGATGGATGGTaGAGAGGGGGTGTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: PGSHILLCALRSLFMFLYLVDGW*RGGVCL
Trigger: CAAGCAGACACCCCCTCTTCACCATCCATCGACCAG...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTCCAGCCCTTTGCCATTaGGCGCCGCCAGCCTTACGG +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFPALCH*APPALR
Trigger: CCGTAAGGCTGGCGGCGCTCAATGGCAAAGGGCTGG...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GGGGAGCCGCCGTCATCCTGCTTGATCAGGTTCACTTTAATAGAGTTTCCATCCGTCCTGAACACAAAATaGGCCGCCTTGGATTTTCCT +
Preference number: 4 (lower is better)
Translates to: GEPPSSCLIRFTLIEFPSVLNTK*AALDFP
Trigger: AGGAAAATCCAAGGCGGCTCATTTTGTGTTCAGGAC...GGATGGAAACTCTATTAAAGTGAACCTGATCAAGCAGGATGACGGCGGCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR TCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACACATTGGGGACCGTCTTaGCTTCGGCTGGCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTHWGPS*LRLALA
Trigger: AGCCAGCGCCAGCCGAAGTCAAGACGGTCCCCAATG...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTTTGGAAATGCTCTGGTaGAGCTGCTGTGTCACTTTT +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEALEMLW*SCCVTF
Trigger: AAAAGTGACACAGCAGCTTCACCAGAGCATTTCCAA...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTTTGGAAATGCTCTGGTaGAGCTGCTGTGTCACTTTT +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAALEMLW*SCCVTF
Trigger: AAAAGTGACACAGCAGCTTCACCAGAGCATTTCCAA...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGAAAGCAAGCGTGGGATaGTCCTACCTACCTCTAGGT +
Preference number: 4 (lower is better)
Translates to: NKREGPRSTECWVGMLMEKASVG*SYLPLG
Trigger: ACCTAGAGGTAGGTAGGATCATCCCACGCTTGCTTT...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTGCGCTGATCGGAGAATaGGTGACAGTCCCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELALIGE*VTVPAS
Trigger: TGAGGCTGGGACTGTCACTCATTCTCCGATCAGCGC...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GTGGATGCTTCCAACCTGTCCTGTAGACTGATGCTCAAAGCCATTCTGTGGGTCCCCAAGCACACACACTaGTATTACCAAGCAGGATTC +
Preference number: 4 (lower is better)
Translates to: VDASNLSCRLMLKAILWVPKHTH*YYQAGF
Trigger: GAATCCTGCTTGGTAATATCAGTGTGTGTGCTTGGG...GACCCACAGAATGGCTTTGAGCATCAGTCTACAGGACAGGTTGGAAGCATCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTCAGCGGCAGCCGAGCTaGGTTCACGCGCTGATCGGA +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFQRQPS*VHALIG
Trigger: TCCGATCAGCGCGTGAACGCAGCTCGGCTGCCGCTG...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTTGCAGAATTGTTTCCTaGCAGCGGCAGCCGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPCRIVS*QRQPSC
Trigger: GCAGCTCGGCTGCCGCTGGCAGGAAACAATTCTGCA...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTCTAGGGGCAGACAATTaGCAGGCTGAGTATGATTAT +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAALGADN*QAEYDY
Trigger: ATAATCATACTCAGCCTGGCAATTGTCTGCCCCTAG...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAATGGGAGGGATGTTCTTaGCGCGGTAAATTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCEWEGCS*RGKFCA
Trigger: GGCACAGAATTTACCGCGGCAAGAACATCCCTCCCA...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTGCAGCATTGTAATCTaGTGGCTGGGAGGGATGTTC +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLCSIVI*WLGGMF
Trigger: GAACATCCCTCCCAGCCAGCAGATTACAATGCTGCA...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp TGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTTGCAGCATTGTAATCTaGTGGCTGGGAGGGATGTTC +
Preference number: 4 (lower is better)
Translates to: WWSCQVLPKGALIFFIGTCSIVI*WLGGMF
Trigger: GAACATCCCTCCCAGCCAGCAGATTACAATGCTGCA...AGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTCACCTGCAGAGAAACTaGAGTTCCCAGGAAAAACAA +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAHLQRN*SSQEKQ
Trigger: TTGTTTTTCCTGGGAACTGCAGTTTCTCTGCAGGTG...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GGTGTGGCAAAGCCATCGACATTACAAGATGAAGAACTGAGTCCACTGAACAGCCCACACACTTGTAAATaGCGGCGTCGTCGATGTTGG +
Preference number: 4 (lower is better)
Translates to: GVAKPSTLQDEELSPLNSPHTCK*RRRRCW
Trigger: CCAACATCGACGACGCCGGCATTTACAAGTGTGTGG...GCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTCCCGTGCCAGGATTCTaGCCTCACAGCGATAAGTGC +
Preference number: 4 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPPVPGF*PHSDKC
Trigger: GCACTTATCGCTGTGAGGGCAGAATCCTGGCACGGG...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GGGAGTTTTTATTCAGTAGAAGGTCCATCCCCAAGCACACACACTGATATTACCCCTGGCCGATGGTGTTaGTGGCGGTGCAGATGTACT +
Preference number: 4 (lower is better)
Translates to: GSFYSVEGPSPSTHTDITPGRWC*WRCRCT
Trigger: AGTACATCTGCACCGCCAGCAACACCATCGGCCAGG...GGTAATATCAGTGTGTGTGCTTGGGGATGGACCTTCTACTGAATAAAAACTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTAGCTTTGGGGCATATTaGACTTCAAGGTACATGGAC +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEASFGAY*TSRYMD
Trigger: GTCCATGTACCTTGAAGTGCAATATGCCCCAAAGCT...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTCCCAATGCGGTTCACTaGAGTACAGTTGTAGTTCCC +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLPNAVH*STVVVP
Trigger: GGGAACTACAACTGTACTGCAGTGAACCGCATTGGG...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp TGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTAATTCCAAGGACTCCTaGCCAATGCGGTTCACTGCA +
Preference number: 4 (lower is better)
Translates to: WWSCQVLPKGALIFFIGTNSKDS*PMRFTA
Trigger: TGCAGTGAACCGCATTGGGCAGGAGTCCTTGGAATT...AGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTACTGCACCTGGGCTGTaGTGGAGTATGGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFTAPGL*WSMAPP
Trigger: AGGTGGAGCCATACTCCAGCACAGCCCAGGTGCAGT...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCATACCACTTGGAATaGCATACTTCTTCACCAACT +
Preference number: 4 (lower is better)
Translates to: SSTQNGCSAAVAMVVLPGSYHLE*HTSSPT
Trigger: AGTTGGTGAAGAAGTATGGCATTCCAAGTGGTATGA...ACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCGGCCTGAGGTGGGGCTaGCGTTGGCTGGGATGGCTG +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFIGLRWG*RWLGWL
Trigger: CAGCCATCCCAGCCAACGGCAGCCCCACCTCAGGCC...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAACCTCCTCCATGTCCTTaGCCTTGGCCCCGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKPPPCP*PWPRAR
Trigger: CCGGGCCCGGGGCCAAGGGCAAGGACATGGAGGAGG...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTACCTCCTCCATGTCCTTaGCCTTGGCCCCGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLPPPCP*PWPRAR
Trigger: CCGGGCCCGGGGCCAAGGGCAAGGACATGGAGGAGG...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTTCACCCATCATGCTTTaGTCTCGTTCTCCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEASPIML*SRSPLS
Trigger: AGACAAAGGAGAACGAGAGCAAAGCATGATGGGTGA...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTTCTCTTCACCCATCATaGTTTGCTCTCGTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEASLHPS*FALVLL
Trigger: AAGGAGAACGAGAGCAAAGCATGATGGGTGAAGAGA...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACAGTGACCAGAAGAGCCTaGCCCTCACTGCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTVTRRA*PSLLGP
Trigger: AGGGCCCAGCAGTGAGGGGCAGGCTCTTCTGGTCAC...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TGGCGGCTAATCAGAAAGTGGTCTAACCCCCAAAGAAACACAAAAATAACCAAAGTGACCAGAAGAGCCTaGCCCTCACTGCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: WRLIRKWSNPQRNTKITKVTRRA*PSLLGP
Trigger: AGGGCCCAGCAGTGAGGGGCAGGCTCTTCTGGTCAC...TTTGGTTATTTTTGTGTTTCTTTGGGGGTTAGACCACTTTCTGATTAGCCGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCCCCCGAAGTACAGAATaGTGGGTAGGGATGTTAATG +
Preference number: 4 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSPRSTE*WVGMLM
Trigger: CATTAACATCCCTACCCAGCATTCTGTACTTCGGGG...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTCTACGCACCACCATGTaGCCATCCAGAGTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLLRTTM*PSRVFS
Trigger: AGAAAAGACTCTGGATGGGCACATGGTGGTGCGTAG...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGCTACGCACCACCATGTaGCCATCCAGAGTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: NKREGPRSTECWVGMLMELRTTM*PSRVFS
Trigger: AGAAAAGACTCTGGATGGGCACATGGTGGTGCGTAG...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618266.4
CDS-3UTR GCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTGTAGGATGCAGAATTaGCTCCCAAGGTTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLCRMQN*LPRLLG
Trigger: TCCCAGCAACCTTGGGAGGCAATTCTGCATCCTACA...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTGACAAAGGTGTAGGATaGAGAATTGCCTCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWADKGVG*RIASQG
Trigger: ACCTTGGGAGGCAATTCTGCATCCTACACCTTTGTC...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp CAAAATGAGCCGCCTTGGATTTTCCTTGCTGGTTCTCAGCCACCACGTAGACCTGACAAAGGTGTAGGATaGAGAATTGCCTCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: QNEPPWIFLAGSQPPRRPDKGVG*RIASQG
Trigger: ACCTTGGGAGGCAATTCTGCATCCTACACCTTTGTC...AGGTCTACGTGGTGGCTGAGAACCAGCAAGGAAAATCCAAGGCGGCTCATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR GCA 90 bp CCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAGACAAAGGTGTAGGATaGAGAATTGCCTCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: PWWSCQVLPKGALIFFIGDKGVG*RIASQG
Trigger: ACCTTGGGAGGCAATTCTGCATCCTACACCTTTGTC...TCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp CAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTACAGCAGTGATTCTGTaGAATGTTTTTAGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: QLWPWWSCQVLPKGALIFTAVIL*NVFSWF
Trigger: GAACCAGCTAAAAACATTGCACAGAATCACTGCTGT...AAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR GCA 90 bp TTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCACATGGGCACTTAAATaGTTAATTGCAAGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: FHTEWLLSSCGHGGPARFTWALK*LIASKA
Trigger: GGCTTTGCTTGCAATTAAGCATTTAAGTGCCCATGT...GAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp CGCCAACATAGGTGGCTTTGCCCCTCAGACCACAGCATGGGATCATTTGGAATCGCTCATGTGAATCAGTaGGGTCTGGCTCTTTTAACA +
Preference number: 4 (lower is better)
Translates to: RQHRWLCPSDHSMGSFGIAHVNQ*GLALLT
Trigger: TGTTAAAAGAGCCAGACCGCACTGATTCACATGAGC...GATTCCAAATGATCCCATGCTGTGGTCTGAGGGGCAAAGCCACCTATGTTGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTCAACATAGGTGGCTTTaGCCCTCAGACCACAGCATG +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFQHRWL*PSDHSM
Trigger: CATGCTGTGGTCTGAGGGGCAAAGCCACCTATGTTG...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACATCCCCTGGGACTGGCTaGGTCTTGAACTCGGAGGCC +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTSPGTG*VLNSEA
Trigger: GGCCTCCGAGTTCAAGACGCAGCCAGTCCCAGGGGA...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTAGCATTGTAATCTGCTaGCTGGGAGGGATGTTCTTG +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWASIVIC*LGGMFL
Trigger: CAAGAACATCCCTCCCAGCCAGCAGATTACAATGCT...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTGCATCTCCTGCCACTTaGCATAAGAAGAATTTGGAC +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAASPAT*HKKNLD
Trigger: GTCCAAATTCTTCTTATGCCAAGTGGCAGGAGATGC...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCATCTCCTGCCACTTaGCATAAGAAGAATTTGGAC +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAASPAT*HKKNLD
Trigger: GTCCAAATTCTTCTTATGCCAAGTGGCAGGAGATGC...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGGAACTCCTGTGGGGTTaGCGCATTCTTGAACATGAG +
Preference number: 4 (lower is better)
Translates to: NKREGPRSTECWVGMLMEELLWG*RILEHE
Trigger: CTCATGTTCAAGAATGCGCCAACCCCACAGGAGTTC...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTCCAGATGATGGTTGGTaGGAGGGAGCTGACCACATC +
Preference number: 4 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSPDDGW*EGADHI
Trigger: GATGTGGTCAGCTCCCTCCCACCAACCATCATCTGG...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAGACACCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTGGCCGAGGTTGGCGGTaGCATTCACAATATTCTGCC +
Preference number: 4 (lower is better)
Translates to: QTPRLSHSTVCSKISLHVGRGWR*HSQYSA
Trigger: GGCAGAATATTGTGAATGCCACCGCCAACCTCGGCC...AACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGGTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTACGGACTGGCCGAGGTTaGCGGTGGCATTCACAATAT +
Preference number: 4 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLRTGRG*RWHSQY
Trigger: ATATTGTGAATGCCACCGCCAACCTCGGCCAGTCCG...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTTTTTTGATGGTCAGCTaGGAACTATCGTCGCTGAAG +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAFLMVS*ELSSLK
Trigger: CTTCAGCGACGATAGTTCCCAGCTGACCATCAAAAA...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTTTTTTGATGGTCAGCTaGGAACTATCGTCGCTGAAG +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAFLMVS*ELSSLK
Trigger: CTTCAGCGACGATAGTTCCCAGCTGACCATCAAAAA...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATGGCCGATGGTGTTGCTaGCGGTGCAGATGTACTCTC +
Preference number: 4 (lower is better)
Translates to: PGSHILLCALRSLFMFLYGRWCC*RCRCTL
Trigger: GAGAGTACATCTGCACCGCCAGCAACACCATCGGCC...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACAGGGAGTCCTGGCCGATaGTGTTGCTGGCGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTGSPGR*CCWRCR
Trigger: TCTGCACCGCCAGCAACACCATCGGCCAGGACTCCC...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGGCGGCTAATCAGAAAGTGGTCTAACCCCCAAAGAAACACAAAAATAACCAAAGGGAGTCCTGGCCGATaGTGTTGCTGGCGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: WRLIRKWSNPQRNTKITKGSPGR*CCWRCR
Trigger: TCTGCACCGCCAGCAACACCATCGGCCAGGACTCCC...TTTGGTTATTTTTGTGTTTCTTTGGGGGTTAGACCACTTTCTGATTAGCCGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATCAAGGTACATGGACTaGGAGTCCTGGCCGATGGTG +
Preference number: 4 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLSRYMD*ESWPMV
Trigger: CACCATCGGCCAGGACTCCCAGTCCATGTACCTTGA...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTCAGGTGATGTTCACCTaGTTCCCCTCCCAAGTGTAC +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFQVMFT*FPSQVY
Trigger: GTACACTTGGGAGGGGAACCAGGTGAACATCACCTG...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAACAGGTGATGTTCACCTaGTTCCCCTCCCAAGTGTAC +
Preference number: 4 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCEQVMFT*FPSQVY
Trigger: GTACACTTGGGAGGGGAACCAGGTGAACATCACCTG...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTATGAGATCGTGGCACTaGGATAGGCAAATACCTCGC +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLMRSWH*DRQIPR
Trigger: GCGAGGTATTTGCCTATCCCAGTGCCACGATCTCAT...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGAAACCATGAGATCGTaGCACTGGGATAGGCAAATA +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAETMRS*HWDRQI
Trigger: TATTTGCCTATCCCAGTGCCACGATCTCATGGTTTC...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTGCTCCACCTGGTCGATaGATGGTGAAGAGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFAPPGR*MVKRGC
Trigger: ACACCCCCTCTTCACCATCCATCGACCAGGTGGAGC...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATGCTCCACCTGGTCGATaGATGGTGAAGAGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: PGSHILLCALRSLFMFLYAPPGR*MVKRGC
Trigger: ACACCCCCTCTTCACCATCCATCGACCAGGTGGAGC...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GGTGTGGCAAAGCCATCGACATTACAAGATGAAGAACTGAGTCCACTGAACAGCGAGTATGGCTCCACCTaGTCGATGGATGGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: GVAKPSTLQDEELSPLNSEYGST*SMDGEE
Trigger: CTCTTCACCATCCATCGACCAGGTGGAGCCATACTC...GCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTTCATCAAACTGCACCTaGGCTGTGCTGGAGTATGGC +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFSSNCT*AVLEYG
Trigger: GCCATACTCCAGCACAGCCCAGGTGCAGTTTGATGA...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GATCAGGTTCACTTTAATAGAGTTTCCATCCTCTCCCATCTGCCCTTCGAGCTTTGGGCACCCCACCTGTaGCCTCTGGTTCATCAAACT +
Preference number: 4 (lower is better)
Translates to: DQVHFNRVSILSHLPFELWAPHL*PLVHQT
Trigger: AGTTTGATGAACCAGAGGCCACAGGTGGGGTGCCCA...AAGCTCGAAGGGCAGATGGGAGAGGATGGAAACTCTATTAAAGTGAACCTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR CCA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATGGGCACCCCACCTGTaGCCTCTGGTTCATCAAACT +
Preference number: 4 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLWAPHL*PLVHQT
Trigger: AGTTTGATGAACCAGAGGCCACAGGTGGGGTGCCCA...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGTGGCATCATACCACTTaGAATGCCATACTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: RMVAQQLWPWWSCQVLPKWHHTT*NAILLH
Trigger: GTGAAGAAGTATGGCATTCCAAGTGGTATGATGCCA...CTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTCGGGAGCCTGATCTCTaGTTTCCACTCGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELREPDL*FPLGGE
Trigger: CTCTCCTCCGAGTGGAAACCAGAGATCAGGCTCCCG...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGCCGTTGGCTGGGATaGCTGTGGGCTGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFICRWLG*LWAGPR
Trigger: CCTCGGCCCAGCCCACAGCCATCCCAGCCAACGGCA...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTAGGGGCTGCCGTTGGCTaGGATGGCTGTGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLGAAVG*DGCGLG
Trigger: GCCCAGCCCACAGCCATCCCAGCCAACGGCAGCCCC...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGTGCTCAGGCCTGAGGTaGGGCTGCCGTTGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLCSGLR*GCRWLG
Trigger: TCCCAGCCAACGGCAGCCCCACCTCAGGCCTGAGCA...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAACCACGATGGGCTCCTTaGACTCATCTTTCGAGAAGG +
Preference number: 4 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCEPRWAP*THLSRR
Trigger: CCTTCTCGAAAGATGAGTCCAAGGAGCCCATCGTGG...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTGTGGCGTGGTCTCGTTaGGCTCTGTGTGTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFVAWSR*ALCVSL
Trigger: GAGGGAAACACACAGAGCCCAACGAGACCACGCCAC...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTGTGGCGTGGTCTCGTTaGGCTCTGTGTGTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPVAWSR*ALCVSL
Trigger: GAGGGAAACACACAGAGCCCAACGAGACCACGCCAC...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTCTCGGGCTCCGTCAGTaGCGTGGTCTCGTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFLGLRQ*RGLVGL
Trigger: GAGCCCAACGAGACCACGCCACTGACGGAGCCCGAG...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATGACTTCGGCTGGCGCTaGCTTCGTTTCTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: PGSHILLCALRSLFMFLYDFGWR*LRFCLL
Trigger: CAGGAGACAGAAACGAAGCCAGCGCCAGCCGAAGTC...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAGACACCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCGTCTTGACTTCGGCTaGCGCTGGCTTCGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: QTPRLSHSTVCSKISLHVRLDFG*RWLRFC
Trigger: ACAGAAACGAAGCCAGCGCCAGCCGAAGTCAAGACG...AACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGGTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTCGGCTAATCAGAAAGTaGTCTAACCCCCAAAGAAAC +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEARLIRK*SNPQRN
Trigger: GTTTCTTTGGGGGTTAGACCACTTTCTGATTAGCCG...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTGGTATGGCATGGGCTTaGCCTGGTGTGGCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFGMAWA*PGVAKP
Trigger: TGGCTTTGCCACACCAGGCCAAGCCCATGCCATACC...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATGGTATGGCATGGGCTTaGCCTGGTGTGGCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: PGSHILLCALRSLFMFLYGMAWA*PGVAKP
Trigger: TGGCTTTGCCACACCAGGCCAAGCCCATGCCATACC...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GGTGTGGCAAAGCCATCGACATTACAAGATGAAGAACTGAGTCCACTGAACAGCTCCTCCAGCAGAACTTaGCCATGCCGGTCTTCATGT +
Preference number: 4 (lower is better)
Translates to: GVAKPSTLQDEELSPLNSSSSRT*PCRSSC
Trigger: ACATGAAGACCGGCATGGCCAAGTTCTGCTGGAGGA...GCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCAGTCAGGCGTGGCCGTaGCCGGCGGGGCAATACTGG +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFISQAWP*PAGQYW
Trigger: CCAGTATTGCCCCGCCGGCCACGGCCACGCCTGACT...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR CCA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGACCAGCAGGGGCGCTTaGGCTGAGGACAGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLTSRGA*AEDSPL
Trigger: CAAGGGGCTGTCCTCAGCCCAAGCGCCCCTGCTGGT...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR CCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCCCTGAGGGGCTTCTGTaGCAGGGGCAGCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFIPEGLL*QGQPLL
Trigger: CAGCAGCGGCTGCCCCTGCCACAGAAGCCCCTCAGG...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR CCA 90 bp CCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAAGGCCAAGTTGTATCTaGTGGAGACAATGGAACAGG +
Preference number: 4 (lower is better)
Translates to: PWWSCQVLPKGALIFFIGRPSCI*WRQWNR
Trigger: CCTGTTCCATTGTCTCCACCAGATACAACTTGGCCT...TCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TGTGGGCTGGGCCGAGGTCCTGAACACAAAATGAGCCGCCTTGGATTTTCCTTGGCACGCATACTCATATaGATTCTTCAGGAGATTCAG +
Preference number: 4 (lower is better)
Translates to: CGLGRGPEHKMSRLGFSLARILI*ILQEIQ
Trigger: CTGAATCTCCTGAAGAATCCATATGAGTATGCGTGC...CAAGGAAAATCCAAGGCGGCTCATTTTGTGTTCAGGACCTCGGCCCAGCCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR CCA 90 bp AAAACCTTCTCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCGAAGCACTGACAGGTTaGCTCGGCCCCAATTTATTA +
Preference number: 4 (lower is better)
Translates to: KTFSSTQNGCSAAVAMVVEALTG*LGPNLL
Trigger: TAATAAATTGGGGCCGAGCCAACCTGTCAGTGCTTC...GACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGAGAAGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATTGCACTGGGTTCCCCTaGGACTGGCTGCGTCTTGAA +
Preference number: 4 (lower is better)
Translates to: PGSHILLCALRSLFMFLYCTGFP*DWLRLE
Trigger: TTCAAGACGCAGCCAGTCCCAGGGGAACCCAGTGCA...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR CAA 72 bp ACCACTTTGACAGTCTTGACAAGGTATGGCATGGGCTaGGCCTGGTGTGGCAAAGCCATCGACATTACAAGA +
Preference number: 4 (lower is better)
Translates to: TTLTVLTRYGMG*AWCGKAIDITR
Trigger: TCTTGTAATGTCGATGGCTTTGCCACACCAGGCCAAGCCCATGCCATACCTTGTCAAGACTGTCAAAGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTTTGAACATGAGCTTCTaGAAGATCTTCACGTTGACG +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAALNMSF*KIFTLT
Trigger: CGTCAACGTGAAGATCTTTCAGAAGCTCATGTTCAA...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp ACCTTCTCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGACATTCACAATGACCTaGATGTCCTTGAAGTTGATC +
Preference number: 4 (lower is better)
Translates to: TFSSTQNGCSAAVAMVVLTFTMT*MSLKLI
Trigger: GATCAACTTCAAGGACATTCAGGTCATTGTGAATGT...CAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGAGAAGGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCCATCGCACACCAGGGTaGCGGACTGGCCGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFIHRTPG*RTGRGW
Trigger: CCAACCTCGGCCAGTCCGTCACCCTGGTGTGCGATG...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp AATTTGGGAAAACCAACGAGAGATGTCATTTGCATTGCTTTTGAGATGAAACGTCATCGCACACCAGGGTaGCGGACTGGCCGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: NLGKPTRDVICIAFEMKRHRTPG*RTGRGW
Trigger: CCAACCTCGGCCAGTCCGTCACCCTGGTGTGCGATG...ACGTTTCATCTCAAAAGCAATGCAAATGACATCTCTCGTTGGTTTTCCCAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR TCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTTCTTATCCACCTTTTTaGTGGTCAGCTGGGAACTAT +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAASYPPF*WSAGNY
Trigger: ATAGTTCCCAGCTGACCATCAAAAAGGTGGATAAGA...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CCCACACTGACCTGGGATCCTTATGCTCTGCCCTGTGCCCAAAAACCATGCCTGGGTTCTCTACATATGTaGTTTTGGGTTTTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: PTLTWDPYALPCAQKPCLGSLHM*FWVLQR
Trigger: TCTTTGCAAAACCCAAAATCACATATGTAGAGAACC...CAGGCATGGTTTTTGGGCACAGGGCAGAGCATAAGGATCCCAGGTCAGTGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTGCCATCCCGAAACCATaGGATCGTGGCACTGGGATA +
Preference number: 4 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPAIPKP*DRGTGI
Trigger: TATCCCAGTGCCACGATCTCATGGTTTCGGGATGGC...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGGGTGTTGTAGATCTTaGTATTGCTGTAATTGGAGC +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAGCCRS*YCCNWS
Trigger: GCTCCAATTACAGCAATATCAAGATCTACAACACCC...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CGCCAACATAGGTGGCTTTGCCCCTCAGACCACAGCATGGGATCATTTGGAATCGGGTGTTGTAGATCTTaGTATTGCTGTAATTGGAGC +
Preference number: 4 (lower is better)
Translates to: RQHRWLCPSDHSMGSFGIGCCRS*YCCNWS
Trigger: GCTCCAATTACAGCAATATCAAGATCTACAACACCC...GATTCCAAATGATCCCATGCTGTGGTCTGAGGGGCAAAGCCACCTATGTTGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp GGTGTGGCAAAGCCATCGACATTACAAGATGAAGAACTGAGTCCACTGAACAGCCTGCTTGAACAAGGATaGATTCCAAGGACTCCTGCC +
Preference number: 4 (lower is better)
Translates to: GVAKPSTLQDEELSPLNSLLEQG*IPRTPA
Trigger: GGCAGGAGTCCTTGGAATTCATCCTTGTTCAAGCAG...GCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGTCAGGCCCACGATGGTaGCGATGCCCTCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLSGPRW*RCPPCW
Trigger: CCAGCATGGAGGGCATCGTCACCATCGTGGGCCTGA...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCACTCGGAGGCCGCGCTaGTCTCACCCAGCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFITRRPR*SHPALC
Trigger: GCAAAGGGCTGGGTGAGATCAGCGCGGCCTCCGAGT...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACACCAGGGACTTCAGCATaGCGTGGTCACTGCCAGACG +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTPGTSA*RGHCQT
Trigger: CGTCTGGCAGTGACCACGTCATGCTGAAGTCCCTGG...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTGTCCTGAACACAAAATaGGCCGCCTTGGATTTTCCT +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLVLNTK*AALDFP
Trigger: AGGAAAATCCAAGGCGGCTCATTTTGTGTTCAGGAC...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000401611.6
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp TGGCGGCTAATCAGAAAGTGGTCTAACCCCCAAAGAAACACAAAAATAACCAAAGCTGGGCCGAGGTCCTaGACACAAAATGAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: WRLIRKWSNPQRNTKITKAGPRS*TQNEPP
Trigger: AGGCGGCTCATTTTGTGTTCAGGACCTCGGCCCAGC...TTTGGTTATTTTTGTGTTTCTTTGGGGGTTAGACCACTTTCTGATTAGCCGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACAGCTGGGCCGAGGTCCTaGACACAAAATGAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTAGPRS*TQNEPP
Trigger: AGGCGGCTCATTTTGTGTTCAGGACCTCGGCCCAGC...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGAACCAAAACCAGTTTaGCCTAACCACAACCACTTT +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAEPKPV*PNHNHF
Trigger: AAAGTGGTTGTGGTTAGGTCAAACTGGTTTTGGTTC...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCCCGGGCCAGGTGATCTaGGGGCTGACCTGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: VVSMFHLVKSFITREKAPPGQVI*GLTCFF
Trigger: GAAGAAACAGGTCAGCCCTCAGATCACCTGGCCCGG...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
49% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTAGCCGGTACAGAGTTTaGGTCAGGCGTGGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFSRYRV*VRRGRG
Trigger: GCCACGGCCACGCCTGACTCAAACTCTGTACCGGCT...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR TCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAGCTAGCGGCAGGGGTTaGGGTCGGGGTGTCGCTCAG +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKASGRG*GRGVAQ
Trigger: CTGAGCGACACCCCGACCTCAACCCCTGCCGCTAGC...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR TCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTAGCCTCCTGCTTGGCCTaGGGGGCTTCTGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLASCLA*GASVAG
Trigger: CCCTGCCACAGAAGCCCCTCAGGCCAAGCAGGAGGC...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR TCA 90 bp GTGGATGCTTCCAACCTGTCCTGTAGACTGATGCTCAAAGCCATTCTGTGGGTCGGGGCAAACTCCTTATaGAGTGGCACAAAAGTATCT +
Preference number: 4 (lower is better)
Translates to: VDASNLSCRLMLKAILWVGANSL*SGTKVS
Trigger: AGATACTTTTGTGCCACTTCATAAGGAGTTTGCCCC...GACCCACAGAATGGCTTTGAGCATCAGTCTACAGGACAGGTTGGAAGCATCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAACAGCGGCAGCCGAGCTaGGTTCACGCGCTGATCGGA +
Preference number: 4 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQQRQPS*VHALIG
Trigger: TCCGATCAGCGCGTGAACGCAGCTCGGCTGCCGCTG...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGACTAGGGGCAGACAATTaGCAGGCTGAGTATGATTAT +
Preference number: 4 (lower is better)
Translates to: PWWSCQVLPKGALIFFIGLGADN*QAEYDY
Trigger: ATAATCATACTCAGCCTGGCAATTGTCTGCCCCTAG...TCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTGCATTCACAATATTCTaGCTGGCCTGGATGGTAGGT +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLAFTIF*LAWMVG
Trigger: ACCTACCATCCAGGCCAGGCAGAATATTGTGAATGC...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp AGCACACACACTGATATTACCAAGCAGGATTCAGCCCTGAGTCTCCACAAGGGACCTTGTTCTCAGCAATaGAGATGTACTCAGCCTCGT +
Preference number: 4 (lower is better)
Translates to: STHTDITKQDSALSLHKGPCSQQ*RCTQPR
Trigger: ACGAGGCTGAGTACATCTGCATTGCTGAGAACAAGG...TCCCTTGTGGAGACTCAGGGCTGAATCCTGCTTGGTAATATCAGTGTGTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTTGGATGGTCGCATCCTaGTCGCCAGCCTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPWMVAS*SPALFS
Trigger: TGAGAACAAGGCTGGCGAGCAGGATGCGACCATCCA...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp AGTTGCCCATCATGTCAGCAAAACGCTCATGTGAATCAGTGCGGTCTGGCTCTTCAGGTAAGAGTGACCTaGTCCTCTAATTCCATGGCA +
Preference number: 4 (lower is better)
Translates to: SCPSCQQNAHVNQCGLALQVRVT*SSNSMA
Trigger: TGCCATGGAATTAGAGGAGCAGGTCACTCTTACCTG...AAGAGCCAGACCGCACTGATTCACATGAGCGTTTTGCTGACATGATGGGCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATCTACGCACCACCATGTaGCCATCCAGAGTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: PGSHILLCALRSLFMFLYLRTTM*PSRVSC
Trigger: GCAAGAGACTCTGGATGGGCACATGGTGGTGCGTAG...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316851.12
ENST00000615112.4
CDS-3UTR GCA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTCATCAGTGTACTGGATaGTCTTCAGGGTCAGCGACG +
Preference number: 4 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSHQCTG*SSGSAT
Trigger: CGTCGCTGACCCTGAAGAGCATCCAGTACACTGATG...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCAGCTTTGGGGCATATTaGACTTCAAGGTACATGGAC +
Preference number: 4 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSSFGAY*TSRYMD
Trigger: GTCCATGTACCTTGAAGTGCAATATGCCCCAAAGCT...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CAGACACCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTAGGACTCCTGCCCAATaGGGTTCACTGCAGTACAGT +
Preference number: 4 (lower is better)
Translates to: QTPRLSHSTVCSKISLHVRTPAQ*GSLQYS
Trigger: ACTGTACTGCAGTGAACCGCATTGGGCAGGAGTCCT...AACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGGTGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTAAGGACTCCTGCCCAATaGGGTTCACTGCAGTACAGT +
Preference number: 4 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLRTPAQ*GSLQYS
Trigger: ACTGTACTGCAGTGAACCGCATTGGGCAGGAGTCCT...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTTACTTCTTCACCAACTaGTCTCCACTCAGCTTTGTA +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAYFFTN*SPLSFV
Trigger: TACAAAGCTGAGTGGAGAGCAGTTGGTGAAGAAGTA...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CGCCAACATAGGTGGCTTTGCCCCTCAGACCACAGCATGGGATCATTTGGAATCTACTTCTTCACCAACTaGTCTCCACTCAGCTTTGTA +
Preference number: 4 (lower is better)
Translates to: RQHRWLCPSDHSMGSFGIYFFTN*SPLSFV
Trigger: TACAAAGCTGAGTGGAGAGCAGTTGGTGAAGAAGTA...GATTCCAAATGATCCCATGCTGTGGTCTGAGGGGCAAAGCCACCTATGTTGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCCATCCTCTCCCATCTaGCCTTCGAGCTTAGGTGCA +
Preference number: 4 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFPSSPI*PSSLGA
Trigger: TGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGG...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ACGAGGACTGAAAGCACATCCCAGAACGTTCATCAGCCCCAGAAAATATCCAACGAGCCGCCGTCATCCTaGTTGATCAGGTTCACTTTA +
Preference number: 4 (lower is better)
Translates to: TRTESTSQNVHQPQKISNEPPSS*LIRFTL
Trigger: TAAAGTGAACCTGATCAAGCAGGATGACGGCGGCTC...GTTGGATATTTTCTGGGGCTGATGAACGTTCTGGGATGTGCTTTCAGTCCTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCTCTCTTCACCCATCATaGTTTGCTCTCGTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSSLHPS*FALVLL
Trigger: AAGGAGAACGAGAGCAAAGCATGATGGGTGAAGAGA...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAACTGTGGTGTTGGAAATaGTCTGGTGAAGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCELWCWK*SGEAAV
Trigger: CACAGCAGCTTCACCAGAGCATTTCCAACACCACAG...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CAGACACCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCTCGTCACACTTGAGTaGTCCTCCAGCAGAACTTGG +
Preference number: 4 (lower is better)
Translates to: QTPRLSHSTVCSKISLHVLVTLE*SSSRTW
Trigger: CCAAGTTCTGCTGGAGGAGCACTCAAGTGTGACGAG...AACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGGTGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACATATACACCACAGCCCTaGAGGGTCCAGTGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTYTPQP*RVQWPC
Trigger: GCAGGGCCACTGGACCCTGCAGGGCTGTGGTGTATA...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGTTCCACCTCCAAAGCTaGACTATATACACCACAGCC +
Preference number: 4 (lower is better)
Translates to: NKREGPRSTECWVGMLMEFHLQS*TIYTTA
Trigger: GGCTGTGGTGTATATAGTGCAGCTTTGGAGGTGGAA...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTTGTAGGATGCAGAATTaGCTCCCAAGGTTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFCRMQN*LPRLLG
Trigger: TCCCAGCAACCTTGGGAGGCAATTCTGCATCCTACA...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTAAGCAAGGGCTGTGGCTaGCTCGGCCGGGCTCTTCGC +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLSKGCG*LGRALR
Trigger: GCGAAGAGCCCGGCCGAGGCAGCCACAGCCCTTGCT...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR GCA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGTCCCCTGGGACTGGCTaGGTCTTGAACTCGGAGGCC +
Preference number: 4 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLSPGTG*VLNSEA
Trigger: GGCCTCCGAGTTCAAGACGCAGCCAGTCCCAGGGGA...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCCCCTTCGAGCTTAGGTaGACTGGGTTCCCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: VVSMFHLVKSFITREKAPPFELR*TGFPWD
Trigger: GTCCCAGGGGAACCCAGTGCACCTAAGCTCGAAGGG...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
49% GC, longest homopolymer 8 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTCCCGGAACTCCTGTaGGGTTGGCGCATTCTTGAA +
Preference number: 4 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFLPELL*GWRILE
Trigger: TTCAAGAATGCGCCAACCCCACAGGAGTTCCGGGAG...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTCGGACTGGCCGAGGTTaGCGGTGGCATTCACAATAT +
Preference number: 4 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELRTGRG*RWHSQY
Trigger: ATATTGTGAATGCCACCGCCAACCTCGGCCAGTCCG...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTCCTTTGTCCAGCTCATaGTGGGCTCTGGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPPLSSS*WALGSL
Trigger: AAGGCTTCCCAGAGCCCACCATGAGCTGGACAAAGG...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTTTGATGGTCAGCTaGGAACTATCGTCGCTGAAG +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWAFLMVS*ELSSLK
Trigger: CTTCAGCGACGATAGTTCCCAGCTGACCATCAAAAA...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp CCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGATTTTTGATGGTCAGCTaGGAACTATCGTCGCTGAAG +
Preference number: 4 (lower is better)
Translates to: PWWSCQVLPKGALIFFIGFLMVS*ELSSLK
Trigger: CTTCAGCGACGATAGTTCCCAGCTGACCATCAAAAA...TCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCGACGACACACGGGCATaGCTACGCACCACCATGTGC +
Preference number: 4 (lower is better)
Translates to: VVSMFHLVKSFITREKAPDDTRA*LRTTMC
Trigger: GCACATGGTGGTGCGTAGCCATGCCCGTGTGTCGTC...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGGCGGCTAATCAGAAAGTGGTCTAACCCCCAAAGAAACACAAAAATAACCAAAGACGACACACGGGCATaGCTACGCACCACCATGTGC +
Preference number: 4 (lower is better)
Translates to: WRLIRKWSNPQRNTKITKDDTRA*LRTTMC
Trigger: GCACATGGTGGTGCGTAGCCATGCCCGTGTGTCGTC...TTTGGTTATTTTTGTGTTTCTTTGGGGGTTAGACCACTTTCTGATTAGCCGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTATGAGATCGTGGCACTaGGATAGGCAAATACCTCGC +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFMRSWH*DRQIPR
Trigger: GCGAGGTATTTGCCTATCCCAGTGCCACGATCTCAT...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GTCCTCTCCACACTTAGGACGAGATCTCCAAAGGGTCCCTTCAGAAAGATGGACGAAACCATGAGATCGTaGCACTGGGATAGGCAAATA +
Preference number: 4 (lower is better)
Translates to: VLSTLRTRSPKGPFRKMDETMRS*HWDRQI
Trigger: TATTTGCCTATCCCAGTGCCACGATCTCATGGTTTC...GTCCATCTTTCTGAAGGGACCCTTTGGAGATCTCGTCCTAAGTGTGGAGAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp CAGTGCGGTCTGGCTCTTTTAACATGGGCACTTAAATGCTTAATTGCAAGCAAAGCTGTAATTGGAGCTTaGCAGCAGCTGGCCATCCCG +
Preference number: 4 (lower is better)
Translates to: QCGLALLTWALKCLIASKAVIGA*QQLAIP
Trigger: CGGGATGGCCAGCTGCTGCCAAGCTCCAATTACAGC...TTTGCTTGCAATTAAGCATTTAAGTGCCCATGTTAAAAGAGCCAGACCGCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTATCATTCTCAGAGTCTaGGGTCACCTCCAGATAGCT +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLIILRV*GHLQIA
Trigger: AGCTATCTGGAGGTGACCCCAGACTCTGAGAATGAT...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATCATCAAACTGCACCTaGGCTGTGCTGGAGTATGGC +
Preference number: 4 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLSSNCT*AVLEYG
Trigger: GCCATACTCCAGCACAGCCCAGGTGCAGTTTGATGA...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTTGGCATCATACCACTTaGAATGCCATACTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAWHHTT*NAILLH
Trigger: GTGAAGAAGTATGGCATTCCAAGTGGTATGATGCCA...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTCGATGCCCTCCATGCTaGCTTCCTTGGCATCATACC +
Preference number: 4 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELRCPPC*LPWHHT
Trigger: GGTATGATGCCAAGGAAGCCAGCATGGAGGGCATCG...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGGGGATGGCTGTGGGCTaGGCCGAGGTCCTGAACACA +
Preference number: 4 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLGMAVG*AEVLNT
Trigger: TGTGTTCAGGACCTCGGCCCAGCCCACAGCCATCCC...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAATGCCGTTGGCTGGGATaGCTGTGGGCTGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKCRWLG*LWAGPR
Trigger: CCTCGGCCCAGCCCACAGCCATCCCAGCCAACGGCA...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAATTCGAACCTCCACGATaGGCTCCTTGGACTCATCTT +
Preference number: 4 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCEFEPPR*APWTHL
Trigger: AAGATGAGTCCAAGGAGCCCATCGTGGAGGTTCGAA...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAACTCGGGCTCCGTCAGTaGCGTGGTCTCGTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQLGLRQ*RGLVGL
Trigger: GAGCCCAACGAGACCACGCCACTGACGGAGCCCGAG...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCCTCGGGCTCCGTCAGTaGCGTGGTCTCGTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFILGLRQ*RGLVGL
Trigger: GAGCCCAACGAGACCACGCCACTGACGGAGCCCGAG...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTCGTCTTGACTTCGGCTaGCGCTGGCTTCGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELRLDFG*RWLRFC
Trigger: ACAGAAACGAAGCCAGCGCCAGCCGAAGTCAAGACG...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATCGTCTTGACTTCGGCTaGCGCTGGCTTCGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: PGSHILLCALRSLFMFLYRLDFG*RWLRFC
Trigger: ACAGAAACGAAGCCAGCGCCAGCCGAAGTCAAGACG...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAAGTGTCAGAACGTTaGGGAGAGTGGCCCACAGAA +
Preference number: 4 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSEVSER*GEWPTE
Trigger: TTCTGTGGGCCACTCTCCCCAACGTTCTGACACTTC...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTACAGGGCTGTGTGTTCTaGGATCCTCCATTTCCATCC +
Preference number: 4 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLQGCVF*DPPFPS
Trigger: GGATGGAAATGGAGGATCCCAGAACACACAGCCCTG...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTAAGTCTTGACAAGGTATaGCATGGGCTTGGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLSLDKV*HGLGLV
Trigger: CACCAGGCCAAGCCCATGCCATACCTTGTCAAGACT...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAACCTCAAGTGAAAACCTaGGACTCGGAAGGCTCCATA +
Preference number: 4 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCEPQVKT*DSEGSI
Trigger: TATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGG...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGCCGGCGGGGCAATACTaGAGGTCAGGGTGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLPAGQY*RSGWWS
Trigger: AGACCACCACCCTGACCTCCAGTATTGCCCCGCCGG...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR CCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAGCCCCTTGGAAGGGGTaGCCTGGCCAGCCGGTACAG +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKAPWKG*PGQPVQ
Trigger: CTGTACCGGCTGGCCAGGCCACCCCTTCCAAGGGGC...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR CCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCCTGCTGCTAGAGGACTaGCTGCCCCAGTCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFILLLED*LPQSGW
Trigger: CCACCCCGACTGGGGCAGCCAGTCCTCTAGCAGCAG...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR CCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAACCGGGTCCGGGCCTTTaGTGCTGGGAGCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKPGPGL*CWEPPA
Trigger: AGCAGGAGGCTCCCAGCACCAAAGGCCCGGACCCGG...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR CCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTCCAAGTTGTATCTGGTaGAGACAATGGAACAGGGGT +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLPSCIW*RQWNRG
Trigger: ACCCCTGTTCCATTGTCTCCACCAGATACAACTTGG...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp CATGCACGCATACTCATATGGATTCTTCAGGAGATTCAGGTCCTCCACACACATCTCTTCCACACAGAATaGTTGCTCAGCAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: HARILIWILQEIQVLHTHLFHTE*LLSSCG
Trigger: GCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGAG...ATGTGTGTGGAGGACCTGAATCTCCTGAAGAATCCATATGAGTATGCGTGCATG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR CCA 90 bp AATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGAAACTCCTTATGAAGTaGCACAAAAGTATCTGTGAG +
Preference number: 4 (lower is better)
Translates to: NGCSAAVAMVVLPGSSKGKLLMK*HKSICE
Trigger: CTCACAGATACTTTTGTGCCACTTCATAAGGAGTTT...CCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TTCCTTGCTGGTTCTCAGCCACCACGTAGACCTCATACTCAGCATTCCAGTCCATGCAATGTTTTTAGCTaGTTCTGTGGTTGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: FLAGSQPPRRPHTQHSSPCNVFS*FCGCKG
Trigger: GCCCTTGCAACCACAGAACCAGCTAAAAACATTGCA...TGGACTGGAATGCTGAGTATGAGGTCTACGTGGTGGCTGAGAACCAGCAAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR CCA 90 bp AGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGAAAATCAAGCTTCCATaGAGATGCTCAGAGATGAGA +
Preference number: 4 (lower is better)
Translates to: RMVAQQLWPWWSCQVLPKKIKLP*RCSEMR
Trigger: TCTCATCTCTGAGCATCTCCATGGAAGCTTGATTTT...CTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTAAGTCTCATGAGATCCTaGGAAACCTGCACTGCCAGC +
Preference number: 4 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLSLMRS*ETCTAS
Trigger: GCTGGCAGTGCAGGTTTCCCAGGATCTCATGAGACT...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615285.4
CDS-3UTR CCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACAGGGTTCCCCTGGGACTaGCTGCGTCTTGAACTCGGA +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTGFPWD*LRLELG
Trigger: TCCGAGTTCAAGACGCAGCCAGTCCCAGGGGAACCC...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR CAA 72 bp CAGAACCAAAACCAGTTTGACCTAACCACAACCACTTaGACAGTCTTGACAAGGTATGGCATGGGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: QNQNQFDLTTTT*TVLTRYGMGLA
Trigger: GGCCAAGCCCATGCCATACCTTGTCAAGACTGTCAAAGTGGTTGTGGTTAGGTCAAACTGGTTTTGGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATATCATTCCACACCACTaGGATCCGCTGCTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: PGSHILLCALRSLFMFLYIIPHH*DPLLVW
Trigger: CCAAACCAGCAGCGGATCTCAGTGGTGTGGAATGAT...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTATCATTCCACACCACTaGGATCCGCTGCTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFIIPHH*DPLLVW
Trigger: CCAAACCAGCAGCGGATCTCAGTGGTGTGGAATGAT...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CAACACAGCTTGCTTGCTCATCCTAAAATGATACTATTGCTAAGTAATGTCTACGTTGACGGTGGCCTCTaGCTCACTGCCATCCTCGCC +
Preference number: 4 (lower is better)
Translates to: QHSLLAHPKMILLLSNVYVDGGL*LTAILA
Trigger: GGCGAGGATGGCAGTGAGTCAGAGGCCACCGTCAAC...GTAGACATTACTTAGCAATAGTATCATTTTAGGATGAGCAAGCAAGCTGTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR TCA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTTGTGTTTCCAGATaGTGGTTGGTGGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFLCVSR*WLVGGS
Trigger: GCTCCCTCCCACCAACCATCATCTGGAAACACAAAG...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTCCTCATCTGTTTTCTTaGTGCCCCGGATCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELPHLFS*CPGSAG
Trigger: ACCTGCAGATCCGGGGCATCAAGAAAACAGATGAGG...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTACATTCACAATGACCTaGATGTCCTTGAAGTTGATC +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEATFTMT*MSLKLI
Trigger: GATCAACTTCAAGGACATTCAGGTCATTGTGAATGT...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CAACAAGTAGCAGATATGCAGAAACTTCTCTGTAAATCTAGCATGATGGTTTTTCATCGCACACCAGGGTaGCGGACTGGCCGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: QQVADMQKLLCKSSMMVFHRTPG*RTGRGW
Trigger: CCAACCTCGGCCAGTCCGTCACCCTGGTGTGCGATG...AAAAACCATCATGCTAGATTTACAGAGAAGTTTCTGCATATCTGCTACTTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTGGGAACTATCGTCGCTaGAGATGTACTTCTCATCGT +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFGNYRR*RCTSHR
Trigger: ACGATGAGAAGTACATCTTCAGCGACGATAGTTCCC...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTCTTATCCACCTTTTTaGTGGTCAGCTGGGAACTAT +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWASYPPF*WSAGNY
Trigger: ATAGTTCCCAGCTGACCATCAAAAAGGTGGATAAGA...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp AGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGTTCTCTACATATGTaGTTTTGGGTTTTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: RMVAQQLWPWWSCQVLPKGSLHM*FWVLQR
Trigger: TCTTTGCAAAACCCAAAATCACATATGTAGAGAACC...CTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp ATATTTAGGTTTGAACCCAAAATGCAACAAGTAGCAGATATGCAGAAACTTCTCCCAGCCCTTTGCCATTaGGCGCCGCCAGCCTTACGG +
Preference number: 4 (lower is better)
Translates to: IFRFEPKMQQVADMQKLLPALCH*APPALR
Trigger: CCGTAAGGCTGGCGGCGCTCAATGGCAAAGGGCTGG...GAGAAGTTTCTGCATATCTGCTACTTGTTGCATTTTGGGTTCAAACCTAAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTTGCCAGACGGGAGCCTaGTCTCTGGTTTCCACTCGG +
Preference number: 4 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGCQTGA*SLVSTR
Trigger: CCGAGTGGAAACCAGAGATCAGGCTCCCGTCTGGCA...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTTGCCAGACGGGAGCCTaGTCTCTGGTTTCCACTCGG +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFCQTGA*SLVSTR
Trigger: CCGAGTGGAAACCAGAGATCAGGCTCCCGTCTGGCA...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTTCAGGAAGTAGCAGGTaGTGTCCACAACCACCAGGA +
Preference number: 4 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPSGSSR*CPQPPG
Trigger: TCCTGGTGGTTGTGGACATCACCTGCTACTTCCTGA...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CAGACACCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTAAAGCAAGCGTGGGATaGTCCTACCTACCTCTAGGT +
Preference number: 4 (lower is better)
Translates to: QTPRLSHSTVCSKISLHVKASVG*SYLPLG
Trigger: ACCTAGAGGTAGGTAGGATCATCCCACGCTTGCTTT...AACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGGTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GGTGTGGCAAAGCCATCGACATTACAAGATGAAGAACTGAGTCCACTGAACAGCAGATGGATTTTCACCTaGGTGGGACCCAGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: GVAKPSTLQDEELSPLNSRWIFT*VGPRQK
Trigger: TTTTTGCCTGGGTCCCACTCAGGTGAAAATCCATCT...GCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAAAAGACACTAATTCCCTaGAGCACACATGCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCEKTLIP*STHALP
Trigger: CGGAAGAGCATGTGTGCTTCAGGGAATTAGTGTCTT...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTCCGGGCCAGGTGATCTaGGGGCTGACCTGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFPGQVI*GLTCFF
Trigger: GAAGAAACAGGTCAGCCCTCAGATCACCTGGCCCGG...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTACAGACAGCCTCAAGTaGAAACCTGGGACTCGGAAG +
Preference number: 4 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPTDSLK*KPGTRK
Trigger: CTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCTGT...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTTGCAGAGAAAAGCAATaGGACAAAGGTGTAGGATGC +
Preference number: 4 (lower is better)
Translates to: WWSCQVLPKGALIFFIGTCREKQ*DKGVGC
Trigger: GCATCCTACACCTTTGTCTCATTGCTTTTCTCTGCA...AGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp TGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGGCAAACTCCTTATaGAGTGGCACAAAAGTATCT +
Preference number: 4 (lower is better)
Translates to: WWSCQVLPKGALIFFIGTGANSL*SGTKVS
Trigger: AGATACTTTTGTGCCACTTCATAAGGAGTTTGCCCC...AGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp TGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTAGCACAGAGTTAGAATaGGGGGAATGTGTGGTGATT +
Preference number: 4 (lower is better)
Translates to: WWSCQVLPKGALIFFIGTSTELE*GECVVI
Trigger: AATCACCACACATTCCCCTCATTCTAACTCTGTGCT...AGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp CAGTGCGGTCTGGCTCTTTTAACATGGGCACTTAAATGCTTAATTGCAAGCAAAGTAGCTCTCCCACACTaGCCTGGGATCCTTATGCTC +
Preference number: 4 (lower is better)
Translates to: QCGLALLTWALKCLIASKVALPH*PGILML
Trigger: GAGCATAAGGATCCCAGGTCAGTGTGGGAGAGCTAC...TTTGCTTGCAATTAAGCATTTAAGTGCCCATGTTAAAAGAGCCAGACCGCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGGGCCCGGGTTCGTTTTaGTGGAACTGGGATGGGAGC +
Preference number: 4 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLGPGSF*WNWDGS
Trigger: GCTCCCATCCCAGTTCCATCAAAACGAACCCGGGCC...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp AGCACACACACTGATATTACCAAGCAGGATTCAGCCCTGAGTCTCCACAAGGGACTAGGGGCAGACAATTaGCAGGCTGAGTATGATTAT +
Preference number: 4 (lower is better)
Translates to: STHTDITKQDSALSLHKGLGADN*QAEYDY
Trigger: ATAATCATACTCAGCCTGGCAATTGTCTGCCCCTAG...TCCCTTGTGGAGACTCAGGGCTGAATCCTGCTTGGTAATATCAGTGTGTGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTTGCAGCATTGTAATCTaGTGGCTGGGAGGGATGTTC +
Preference number: 4 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSCSIVI*WLGGMF
Trigger: GAACATCCCTCCCAGCCAGCAGATTACAATGCTGCA...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTATGAGATCCTTAGTTTaGAGCATTGTAATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAMRSLV*SIVICW
Trigger: CCAGCAGATTACAATGCTGCAAACTAAGGATCTCAT...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACACCCGTGCCAGGATTCTaGCCTCACAGCGATAAGTGC +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTPVPGF*PHSDKC
Trigger: GCACTTATCGCTGTGAGGGCAGAATCCTGGCACGGG...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCCCCGTGCCAGGATTCTaGCCTCACAGCGATAAGTGC +
Preference number: 4 (lower is better)
Translates to: VVSMFHLVKSFITREKAPPVPGF*PHSDKC
Trigger: GCACTTATCGCTGTGAGGGCAGAATCCTGGCACGGG...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
48% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAAGCATTCACAATATTCTaGCTGGCCTGGATGGTAGGT +
Preference number: 4 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCEAFTIF*LAWMVG
Trigger: ACCTACCATCCAGGCCAGGCAGAATATTGTGAATGC...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTCCTTGTTCTCAGCAATaGAGATGTACTCAGCCTCGT +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFPCSQQ*RCTQPR
Trigger: ACGAGGCTGAGTACATCTGCATTGCTGAGAACAAGG...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTCAGGTAAGAGTGACCTaGTCCTCTAATTCCATGGCA +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFQVRVT*SSNSMA
Trigger: TGCCATGGAATTAGAGGAGCAGGTCACTCTTACCTG...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp GGTGTGGCAAAGCCATCGACATTACAAGATGAAGAACTGAGTCCACTGAACAGCCAGGTAAGAGTGACCTaGTCCTCTAATTCCATGGCA +
Preference number: 4 (lower is better)
Translates to: GVAKPSTLQDEELSPLNSQVRVT*SSNSMA
Trigger: TGCCATGGAATTAGAGGAGCAGGTCACTCTTACCTG...GCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTCATCAGTGTACTGGATaGTCTTCAGGGTCAGCGACG +
Preference number: 4 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPHQCTG*SSGSAT
Trigger: CGTCGCTGACCCTGAAGAGCATCCAGTACACTGATG...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCCCTGGCCGATGGTGTTaGTGGCGGTGCAGATGTACT +
Preference number: 4 (lower is better)
Translates to: VVSMFHLVKSFITREKAPPGRWC*WRCRCT
Trigger: AGTACATCTGCACCGCCAGCAACACCATCGGCCAGG...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
48% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp AACATAGGTGGCTTTGCCCCTCAGACCACAGCATGGGATCATTTGGAATCCCAAAGCTTTGGGGCATATTaGACTTCAAGGTACATGGAC +
Preference number: 4 (lower is better)
Translates to: NIGGFAPQTTAWDHLESQSFGAY*TSRYMD
Trigger: GTCCATGTACCTTGAAGTGCAATATGCCCCAAAGCT...TTGGGATTCCAAATGATCCCATGCTGTGGTCTGAGGGGCAAAGCCACCTATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTTCTGGTTCATCAAACTaGACCTGGGCTGTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFSGSSN*TWAVLE
Trigger: CTCCAGCACAGCCCAGGTGCAGTTTGATGAACCAGA...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTTCATACCACTTGGAATaGCATACTTCTTCACCAACT +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAASYHLE*HTSSPT
Trigger: AGTTGGTGAAGAAGTATGGCATTCCAAGTGGTATGA...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTTCATACCACTTGGAATaGCATACTTCTTCACCAACT +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEASYHLE*HTSSPT
Trigger: AGTTGGTGAAGAAGTATGGCATTCCAAGTGGTATGA...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTAGAGCCGCCGTCATCCTaGTTGATCAGGTTCACTTTA +
Preference number: 4 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLEPPSS*LIRFTL
Trigger: TAAAGTGAACCTGATCAAGCAGGATGACGGCGGCTC...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GGTGTGGCAAAGCCATCGACATTACAAGATGAAGAACTGAGTCCACTGAACAGCTCTACCCCCAGAAGCTaGAATTTGGCATTCGTCCTA +
Preference number: 4 (lower is better)
Translates to: GVAKPSTLQDEELSPLNSSTPRS*NLAFVL
Trigger: TAGGACGAATGCCAAATTGCAGCTTCTGGGGGTAGA...GCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GGTGTGGCAAAGCCATCGACATTACAAGATGAAGAACTGAGTCCACTGAACAGCTTCCACCTCCAAAGCTaGACTATATACACCACAGCC +
Preference number: 4 (lower is better)
Translates to: GVAKPSTLQDEELSPLNSFHLQS*TIYTTA
Trigger: GGCTGTGGTGTATATAGTGCAGCTTTGGAGGTGGAA...GCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CATGCACGCATACTCATATGGATTCTTCAGGAGATTCAGGTCCTCCACACACATTGTAGGATGCAGAATTaGCTCCCAAGGTTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: HARILIWILQEIQVLHTHCRMQN*LPRLLG
Trigger: TCCCAGCAACCTTGGGAGGCAATTCTGCATCCTACA...ATGTGTGTGGAGGACCTGAATCTCCTGAAGAATCCATATGAGTATGCGTGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR GCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTGACAAAGGTGTAGGATaGAGAATTGCCTCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFDKGVG*RIASQG
Trigger: ACCTTGGGAGGCAATTCTGCATCCTACACCTTTGTC...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAGGTCCGGGCCTTTGGTaGTGGGAGCCTCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKGPGLW*WEPPAW
Trigger: CCAAGCAGGAGGCTCCCAGCACCAAAGGCCCGGACC...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR GCA 90 bp GAACACTATGAACATGCACGCATACTCATATGGATTCTTCAGGAGATTCAGGTCAGCTGGTTCTGTGGTTaGAAGGGCAGGAAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: EHYEHARILIWILQEIQVSWFCG*KGRKRP
Trigger: TGGCCTCTTCCTGCCCTTGCAACCACAGAACCAGCT...GACCTGAATCTCCTGAAGAATCCATATGAGTATGCGTGCATGTTCATAGTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR GCA 90 bp TGGATTTTCCTTGCTGGTTCTCAGCCACCACGTAGACCTCATACTCAGCATTCCTCTGCCTTCTTGTTCTaGTTGATGGGATGTATGCCA +
Preference number: 4 (lower is better)
Translates to: WIFLAGSQPPRRPHTQHSSAFLF*LMGCMP
Trigger: TGGCATACATCCCATCAAGCAGAACAAGAAGGCAGA...GGAATGCTGAGTATGAGGTCTACGTGGTGGCTGAGAACCAGCAAGGAAAATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR GCA 90 bp TGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGCTCATGTGAATCAGTaGGGTCTGGCTCTTTTAACA +
Preference number: 4 (lower is better)
Translates to: WWSCQVLPKGALIFFIGTAHVNQ*GLALLT
Trigger: TGTTAAAAGAGCCAGACCGCACTGATTCACATGAGC...AGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp TGGCGGCTAATCAGAAAGTGGTCTAACCCCCAAAGAAACACAAAAATAACCAAACAACTCGGAGATCCTTaGGCTGGCCCGGGTTCGTTT +
Preference number: 4 (lower is better)
Translates to: WRLIRKWSNPQRNTKITKQLGDP*AGPGSF
Trigger: AAACGAACCCGGGCCAGCGCAAGGATCTCCGAGTTG...TTTGGTTATTTTTGTGTTTCTTTGGGGGTTAGACCACTTTCTGATTAGCCGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTGGTGCATGTACCTCTTaGTTCTCTGGTCGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPGACTS*FSGRVH
Trigger: GTGGACTCGACCAGAGAAGCAAGAGGTACATGCACC...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615285.4
CDS-3UTR GCA 90 bp CAGACACCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTTTCTGTCTGCCCACTTaGCAGTTCCATGGTGCATGT +
Preference number: 4 (lower is better)
Translates to: QTPRLSHSTVCSKISLHVFCLPT*QFHGAC
Trigger: ACATGCACCATGGAACTGGCAAGTGGGCAGACAGAA...AACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGGTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615285.4
CDS-3UTR CCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTGCATCTCCTGCCACTTaGCATAAGAAGAATTTGGAC +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLASPAT*HKKNLD
Trigger: GTCCAAATTCTTCTTATGCCAAGTGGCAGGAGATGC...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp CAGACACCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTATATTCTGCCTGGCCTaGATGGTAGGTGGCACATTC +
Preference number: 4 (lower is better)
Translates to: QTPRLSHSTVCSKISLHVIFCLA*MVGGTF
Trigger: GAATGTGCCACCTACCATCCAGGCCAGGCAGAATAT...AACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGGTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ACGTTTAGCAATTTGGGAAAACCAACGAGAGATGTCATTTGCATTGCTTTTGAGGCTCATGGTGGGCTCTaGGAAGCCTTCGGCATCGCA +
Preference number: 4 (lower is better)
Translates to: TFSNLGKPTRDVICIAFEAHGGL*EAFGIA
Trigger: TGCGATGCCGAAGGCTTCCCAGAGCCCACCATGAGC...CTCAAAAGCAATGCAAATGACATCTCTCGTTGGTTTTCCCAAATTGCTAAACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTGCTCATGGTGGGCTCTaGGAAGCCTTCGGCATCGCA +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFAHGGL*EAFGIA
Trigger: TGCGATGCCGAAGGCTTCCCAGAGCCCACCATGAGC...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTGCTCATGGTGGGCTCTaGGAAGCCTTCGGCATCGCA +
Preference number: 4 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGAHGGL*EAFGIA
Trigger: TGCGATGCCGAAGGCTTCCCAGAGCCCACCATGAGC...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTAGTCTCTTGCTTCTCTaGTCGAGTCCACGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSSLLLL*SSPRSL
Trigger: AAGGCTTCGTGGACTCGACCAGAGAAGCAAGAGACT...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316851.12
ENST00000615112.4
CDS-3UTR CCA 90 bp GGGAGTTTTTATTCAGTAGAAGGTCCATCCCCAAGCACACACACTGATATTACCCAGGTGATGTTCACCTaGTTCCCCTCCCAAGTGTAC +
Preference number: 4 (lower is better)
Translates to: GSFYSVEGPSPSTHTDITQVMFT*FPSQVY
Trigger: GTACACTTGGGAGGGGAACCAGGTGAACATCACCTG...GGTAATATCAGTGTGTGTGCTTGGGGATGGACCTTCTACTGAATAAAAACTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp CAGACACCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTATGAGATCGTGGCACTaGGATAGGCAAATACCTCGC +
Preference number: 4 (lower is better)
Translates to: QTPRLSHSTVCSKISLHVMRSWH*DRQIPR
Trigger: GCGAGGTATTTGCCTATCCCAGTGCCACGATCTCAT...AACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGGTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTGAAACCATGAGATCGTaGCACTGGGATAGGCAAATA +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLETMRS*HWDRQI
Trigger: TATTTGCCTATCCCAGTGCCACGATCTCATGGTTTC...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCGCTGTAATTGGAGCTTaGCAGCAGCTGGCCATCCCG +
Preference number: 4 (lower is better)
Translates to: VVSMFHLVKSFITREKAPAVIGA*QQLAIP
Trigger: CGGGATGGCCAGCTGCTGCCAAGCTCCAATTACAGC...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTTCACCTCCAGATAGCTaGCAGAGGGGGTGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELSPPDS*QRGCCR
Trigger: TCTACAACACCCCCTCTGCCAGCTATCTGGAGGTGA...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTTCACCTCCAGATAGCTaGCAGAGGGGGTGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPSPPDS*QRGCCR
Trigger: TCTACAACACCCCCTCTGCCAGCTATCTGGAGGTGA...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTTCACCTCCAGATAGCTaGCAGAGGGGGTGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFSPPDS*QRGCCR
Trigger: TCTACAACACCCCCTCTGCCAGCTATCTGGAGGTGA...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGGCGGCTAATCAGAAAGTGGTCTAACCCCCAAAGAAACACAAAAATAACCAAAGCTCCACCTGGTCGATaGATGGTGAAGAGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: WRLIRKWSNPQRNTKITKAPPGR*MVKRGC
Trigger: ACACCCCCTCTTCACCATCCATCGACCAGGTGGAGC...TTTGGTTATTTTTGTGTTTCTTTGGGGGTTAGACCACTTTCTGATTAGCCGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATGAGTATGGCTCCACCTaGTCGATGGATGGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: PGSHILLCALRSLFMFLYEYGST*SMDGEE
Trigger: CTCTTCACCATCCATCGACCAGGTGGAGCCATACTC...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACAGGCTGTGCTGGAGTATaGCTCCACCTGGTCGATGGA +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTGCAGV*LHLVDG
Trigger: TCCATCGACCAGGTGGAGCCATACTCCAGCACAGCC...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTGCACCTGGGCTGTGCTaGAGTATGGCTCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFAPGLC*SMAPPG
Trigger: ACCAGGTGGAGCCATACTCCAGCACAGCCCAGGTGC...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TCCCACACAGCTTTGATGCTTGAACACTATGAACATGCACGCATACTCATATGGTCATCAAACTGCACCTaGGCTGTGCTGGAGTATGGC +
Preference number: 4 (lower is better)
Translates to: SHTALMLEHYEHARILIWSSNCT*AVLEYG
Trigger: GCCATACTCCAGCACAGCCCAGGTGCAGTTTGATGA...CCATATGAGTATGCGTGCATGTTCATAGTGTTCAAGCATCAAAGCTGTGTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR CCA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTTCATCAAACTGCACCTaGGCTGTGCTGGAGTATGGC +
Preference number: 4 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELSSNCT*AVLEYG
Trigger: GCCATACTCCAGCACAGCCCAGGTGCAGTTTGATGA...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTGGCATCATACCACTTaGAATGCCATACTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWAWHHTT*NAILLH
Trigger: GTGAAGAAGTATGGCATTCCAAGTGGTATGATGCCA...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GTCCTCTCCACACTTAGGACGAGATCTCCAAAGGGTCCCTTCAGAAAGATGGACTGGCATCATACCACTTaGAATGCCATACTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: VLSTLRTRSPKGPFRKMDWHHTT*NAILLH
Trigger: GTGAAGAAGTATGGCATTCCAAGTGGTATGATGCCA...GTCCATCTTTCTGAAGGGACCCTTTGGAGATCTCGTCCTAAGTGTGGAGAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCGCACTGGGTTCCCCTTaGACTGGCTGCGTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: VVSMFHLVKSFITREKAPALGSP*TGCVLN
Trigger: GTTCAAGACGCAGCCAGTCCAAGGGGAACCCAGTGC...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000316851.12
CDS-3UTR CCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACACGGGAGCCTGATCTCTaGTTTCCACTCGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTREPDL*FPLGGE
Trigger: CTCTCCTCCGAGTGGAAACCAGAGATCAGGCTCCCG...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACAGACTTCAGCATGACGTaGTCACTGCCAGACGGGAGC +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTDFSMT*SLPDGS
Trigger: GCTCCCGTCTGGCAGTGACCACGTCATGCTGAAGTC...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAAGGGATGGCTGTGGGCTaGGCCGAGGTCCTGAACACA +
Preference number: 4 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQGMAVG*AEVLNT
Trigger: TGTGTTCAGGACCTCGGCCCAGCCCACAGCCATCCC...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTATGCTCAGGCCTGAGGTaGGGCTGCCGTTGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLCSGLR*GCRWLG
Trigger: TCCCAGCCAACGGCAGCCCCACCTCAGGCCTGAGCA...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAATGCTCAGGCCTGAGGTaGGGCTGCCGTTGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKCSGLR*GCRWLG
Trigger: TCCCAGCCAACGGCAGCCCCACCTCAGGCCTGAGCA...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTCCACGATGGGCTCCTTaGACTCATCTTTCGAGAAGG +
Preference number: 4 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELPRWAP*THLSRR
Trigger: CCTTCTCGAAAGATGAGTCCAAGGAGCCCATCGTGG...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTTTCGAACCTCCACGATaGGCTCCTTGGACTCATCTT +
Preference number: 4 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSFEPPR*APWTHL
Trigger: AAGATGAGTCCAAGGAGCCCATCGTGGAGGTTCGAA...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGGCTCCGTCAGTGGCGTaGTCTCGTTGGGCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLAPSVA*SRWALC
Trigger: ACACAGAGCCCAACGAGACCACGCCACTGACGGAGC...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTACTCGGGCTCCGTCAGTaGCGTGGTCTCGTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLLGLRQ*RGLVGL
Trigger: GAGCCCAACGAGACCACGCCACTGACGGAGCCCGAG...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACATGTCTCCTGGCACTCTaGCTTTGCTTCTACGGGGCC +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTCLLAL*LCFYGA
Trigger: GGCCCCGTAGAAGCAAAGCCAGAGTGCCAGGAGACA...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GGTGTGGCAAAGCCATCGACATTACAAGATGAAGAACTGAGTCCACTGAACAGCGTGTGTCTGTGGTGTTaGAAATGCTCTGGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: GVAKPSTLQDEELSPLNSVCLWC*KCSGEA
Trigger: AGCTTCACCAGAGCATTTCCAACACCACAGACACAC...GCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTAGCGTGTGTGTGTCTGTaGTGTTGGAAATGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLACVCL*CWKCSG
Trigger: ACCAGAGCATTTCCAACACCACAGACACACACACGC...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTACAGATGCAGGCAGGTaGCGGCTAATCAGAAAGTGG +
Preference number: 4 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPTDAGR*RLIRKW
Trigger: CCACTTTCTGATTAGCCGCCACCTGCCTGCATCTGT...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACAGAACGTTGGGGAGAGTaGCCCACAGAATGGACCCAG +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTERWGE*PTEWTQ
Trigger: CTGGGTCCATTCTGTGGGCCACTCTCCCCAACGTTC...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCGAACGTTGGGGAGAGTaGCCCACAGAATGGACCCAG +
Preference number: 4 (lower is better)
Translates to: VVSMFHLVKSFITREKAPERWGE*PTEWTQ
Trigger: CTGGGTCCATTCTGTGGGCCACTCTCCCCAACGTTC...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCGGTATGGCATGGGCTTaGCCTGGTGTGGCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: VVSMFHLVKSFITREKAPGMAWA*PGVAKP
Trigger: TGGCTTTGCCACACCAGGCCAAGCCCATGCCATACC...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCCCCTGCAGGGTCCAGTaGCCCTGCTCGTCACACTTG +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFIPCRVQ*PCSSHL
Trigger: CAAGTGTGACGAGCAGGGCCACTGGACCCTGCAGGG...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAACCCTGCAGGGTCCAGTaGCCCTGCTCGTCACACTTG +
Preference number: 4 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQPCRVQ*PCSSHL
Trigger: CAAGTGTGACGAGCAGGGCCACTGGACCCTGCAGGG...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAGACACCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCAAGTGAAAACCTaGGACTCGGAAGGCTCCATA +
Preference number: 4 (lower is better)
Translates to: QTPRLSHSTVCSKISLHVPQVKT*DSEGSI
Trigger: TATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGG...AACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGGTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTGAATGGAAACAAAGGTaGTATCGATGTTTCACTTGG +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAEWKQR*YRCFTW
Trigger: CCAAGTGAAACATCGATACCACCTTTGTTTCCATTC...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGTTTGAGTCAGGCGTaGCCGTGGCCGGCGGGGCAA +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKSLSQA*PWPAGQ
Trigger: TTGCCCCGCCGGCCACGGCCACGCCTGACTCAAACT...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR CCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTCCTCAGACCACAGCATaGGATCATTTGGAATCCCAA +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFPQTTA*DHLESQ
Trigger: TTGGGATTCCAAATGATCCCATGCTGTGGTCTGAGG...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp ACGAGGACTGAAAGCACATCCCAGAACGTTCATCAGCCCCAGAAAATATCCAACCCTCAGACCACAGCATaGGATCATTTGGAATCCCAA +
Preference number: 4 (lower is better)
Translates to: TRTESTSQNVHQPQKISNPQTTA*DHLESQ
Trigger: TTGGGATTCCAAATGATCCCATGCTGTGGTCTGAGG...GTTGGATATTTTCTGGGGCTGATGAACGTTCTGGGATGTGCTTTCAGTCCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp CAGTGCGGTCTGGCTCTTTTAACATGGGCACTTAAATGCTTAATTGCAAGCAAATCTCCCACACTGACCTaGGATCCTTATGCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: QCGLALLTWALKCLIASKSPTLT*DPYALP
Trigger: GGGCAGAGCATAAGGATCCCAGGTCAGTGTGGGAGA...TTTGCTTGCAATTAAGCATTTAAGTGCCCATGTTAAAAGAGCCAGACCGCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGGGGTTCCCCTGGGACTaGCTGCGTCTTGAACTCGGA +
Preference number: 4 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLGFPWD*LRLELG
Trigger: TCCGAGTTCAAGACGCAGCCAGTCCCAGGGGAACCC...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCTGCACTGGGTTCCCCTaGGACTGGCTGCGTCTTGAA +
Preference number: 4 (lower is better)
Translates to: VVSMFHLVKSFITREKAPCTGFP*DWLRLE
Trigger: TTCAAGACGCAGCCAGTCCCAGGGGAACCCAGTGCA...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAGTTGACGGTGGCCTCTaGCTCACTGCCATCCTCGCC +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKVDGGL*LTAILA
Trigger: GGCGAGGATGGCAGTGAGTCAGAGGCCACCGTCAAC...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTTCTTATCCACCTTTTTaGTGGTCAGCTGGGAACTAT +
Preference number: 4 (lower is better)
Translates to: WWSCQVLPKGALIFFIGTSYPPF*WSAGNY
Trigger: ATAGTTCCCAGCTGACCATCAAAAAGGTGGATAAGA...AGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTGGTTCTCTACATATGTaGTTTTGGGTTTTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAGSLHM*FWVLQR
Trigger: TCTTTGCAAAACCCAAAATCACATATGTAGAGAACC...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTCTGCTTGAACAAGGATaGATTCCAAGGACTCCTGCC +
Preference number: 4 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPLLEQG*IPRTPA
Trigger: GGCAGGAGTCCTTGGAATTCATCCTTGTTCAAGCAG...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTGAGGGGGTGTCTGCTTaGACAAGGATGAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFEGVSA*TRMNSK
Trigger: CTTGGAATTCATCCTTGTTCAAGCAGACACCCCCTC...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAATCAGGCCCACGATGGTaGCGATGCCCTCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKSGPRW*RCPPCW
Trigger: CCAGCATGGAGGGCATCGTCACCATCGTGGGCCTGA...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAATGCCAGACGGGAGCCTaGTCTCTGGTTTCCACTCGG +
Preference number: 4 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQCQTGA*SLVSTR
Trigger: CCGAGTGGAAACCAGAGATCAGGCTCCCGTCTGGCA...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCCCAGGGACTTCAGCATaGCGTGGTCACTGCCAGACG +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFIPGTSA*RGHCQT
Trigger: CGTCTGGCAGTGACCACGTCATGCTGAAGTCCCTGG...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TTCCTCTGCTACATCATATTTAGGTTTGAACCCAAAATGCAACAAGTAGCAGATCCAGGGACTTCAGCATaGCGTGGTCACTGCCAGACG +
Preference number: 4 (lower is better)
Translates to: FLCYIIFRFEPKMQQVADPGTSA*RGHCQT
Trigger: CGTCTGGCAGTGACCACGTCATGCTGAAGTCCCTGG...ATCTGCTACTTGTTGCATTTTGGGTTCAAACCTAAATATGATGTAGCAGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTAGTCCTGAACACAAAATaGGCCGCCTTGGATTTTCCT +
Preference number: 4 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLVLNTK*AALDFP
Trigger: AGGAAAATCCAAGGCGGCTCATTTTGTGTTCAGGAC...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAACATTGGGGACCGTCTTaGCTTCGGCTGGCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKHWGPS*LRLALA
Trigger: AGCCAGCGCCAGCCGAAGTCAAGACGGTCCCCAATG...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTACATTGGGGACCGTCTTaGCTTCGGCTGGCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLHWGPS*LRLALA
Trigger: AGCCAGCGCCAGCCGAAGTCAAGACGGTCCCCAATG...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GGTGTGGCAAAGCCATCGACATTACAAGATGAAGAACTGAGTCCACTGAACAGCAGTCTACGTGGGAATTaGATTCAGCTAGAAAGGGTG +
Preference number: 4 (lower is better)
Translates to: GVAKPSTLQDEELSPLNSSLRGN*IQLERV
Trigger: CACCCTTTCTAGCTGAATTCAATTCCCACGTAGACT...GCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGAGGAAAGTTGTGTTATaGCTCCAGACAGTAGGTTGT +
Preference number: 4 (lower is better)
Translates to: NKREGPRSTECWVGMLMERKVVL*LQTVGC
Trigger: ACAACCTACTGTCTGGAGTCATAACACAACTTTCCT...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCAACATAACCCCACATTaGGCAAATGACAAGACCATT +
Preference number: 4 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSNITPH*ANDKTI
Trigger: AATGGTCTTGTCATTTGCTCAATGTGGGGTTATGTT...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGGAACCAAAACCAGTTTaGCCTAACCACAACCACTTT +
Preference number: 4 (lower is better)
Translates to: NKREGPRSTECWVGMLMEEPKPV*PNHNHF
Trigger: AAAGTGGTTGTGGTTAGGTCAAACTGGTTTTGGTTC...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTGCGCTGATCGGAGAATaGGTGACAGTCCCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGALIGE*VTVPAS
Trigger: TGAGGCTGGGACTGTCACTCATTCTCCGATCAGCGC...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTTGCAGAGAAAAGCAATaGGACAAAGGTGTAGGATGC +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFCREKQ*DKGVGC
Trigger: GCATCCTACACCTTTGTCTCATTGCTTTTCTCTGCA...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp GAATTCTTCCTCTGCTACATCATATTTAGGTTTGAACCCAAAATGCAACAAGTAGGCCCCACTCTGTGCTaGTCTGCGACATGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: EFFLCYIIFRFEPKMQQVGPTLC*SATCCQ
Trigger: CTGGCAGCATGTCGCAGATCAGCACAGAGTGGGGCC...TACTTGTTGCATTTTGGGTTCAAACCTAAATATGATGTAGCAGAGGAAGAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGTGCAGAATTGTTTCCTaGCAGCGGCAGCCGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLCRIVS*QRQPSC
Trigger: GCAGCTCGGCTGCCGCTGGCAGGAAACAATTCTGCA...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTCTAGGGGCAGACAATTaGCAGGCTGAGTATGATTAT +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFLGADN*QAEYDY
Trigger: ATAATCATACTCAGCCTGGCAATTGTCTGCCCCTAG...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATTGCAGCATTGTAATCTaGTGGCTGGGAGGGATGTTC +
Preference number: 4 (lower is better)
Translates to: PGSHILLCALRSLFMFLYCSIVI*WLGGMF
Trigger: GAACATCCCTCCCAGCCAGCAGATTACAATGCTGCA...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTCACCTGCAGAGAAACTaGAGTTCCCAGGAAAAACAA +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFHLQRN*SSQEKQ
Trigger: TTGTTTTTCCTGGGAACTGCAGTTTCTCTGCAGGTG...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp ACGTTTAGCAATTTGGGAAAACCAACGAGAGATGTCATTTGCATTGCTTTTGAGCCCGTGCCAGGATTCTaGCCTCACAGCGATAAGTGC +
Preference number: 4 (lower is better)
Translates to: TFSNLGKPTRDVICIAFEPVPGF*PHSDKC
Trigger: GCACTTATCGCTGTGAGGGCAGAATCCTGGCACGGG...CTCAAAAGCAATGCAAATGACATCTCTCGTTGGTTTTCCCAAATTGCTAAACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR GCA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTAGCATTCACAATATTCTaGCTGGCCTGGATGGTAGGT +
Preference number: 4 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLAFTIF*LAWMVG
Trigger: ACCTACCATCCAGGCCAGGCAGAATATTGTGAATGC...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CAGACACCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTGCATTCACAATATTCTaGCTGGCCTGGATGGTAGGT +
Preference number: 4 (lower is better)
Translates to: QTPRLSHSTVCSKISLHVAFTIF*LAWMVG
Trigger: ACCTACCATCCAGGCCAGGCAGAATATTGTGAATGC...AACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGGTGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTCCTTGTTCTCAGCAATaGAGATGTACTCAGCCTCGT +
Preference number: 4 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSPCSQQ*RCTQPR
Trigger: ACGAGGCTGAGTACATCTGCATTGCTGAGAACAAGG...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTTGTGATTTTGGGTTTTaGAAAGACTTTGAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEACDFGF*KDFEVD
Trigger: ATCCACCTCAAAGTCTTTGCAAAACCCAAAATCACA...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TGGCGGCTAATCAGAAAGTGGTCTAACCCCCAAAGAAACACAAAAATAACCAAATGGTGTTGCTGGCGGTaGAGATGTACTCTCCGGCAT +
Preference number: 4 (lower is better)
Translates to: WRLIRKWSNPQRNTKITKWCCWR*RCTLRH
Trigger: ATGCCGGAGAGTACATCTGCACCGCCAGCAACACCA...TTTGGTTATTTTTGTGTTTCTTTGGGGGTTAGACCACTTTCTGATTAGCCGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGCCTGGCCGATGGTGTTaGTGGCGGTGCAGATGTACT +
Preference number: 4 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLPGRWC*WRCRCT
Trigger: AGTACATCTGCACCGCCAGCAACACCATCGGCCAGG...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTCCTGGCCGATGGTGTTaGTGGCGGTGCAGATGTACT +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFPGRWC*WRCRCT
Trigger: AGTACATCTGCACCGCCAGCAACACCATCGGCCAGG...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTAGCTTTGGGGCATATTaGACTTCAAGGTACATGGAC +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFSFGAY*TSRYMD
Trigger: GTCCATGTACCTTGAAGTGCAATATGCCCCAAAGCT...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTAATTCCAAGGACTCCTaGCCAATGCGGTTCACTGCA +
Preference number: 4 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELNSKDS*PMRFTA
Trigger: TGCAGTGAACCGCATTGGGCAGGAGTCCTTGGAATT...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTAATTCCAAGGACTCCTaGCCAATGCGGTTCACTGCA +
Preference number: 4 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFNSKDS*PMRFTA
Trigger: TGCAGTGAACCGCATTGGGCAGGAGTCCTTGGAATT...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTACTGCACCTGGGCTGTaGTGGAGTATGGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFTAPGL*WSMAPP
Trigger: AGGTGGAGCCATACTCCAGCACAGCCCAGGTGCAGT...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTCATACCACTTGGAATaGCATACTTCTTCACCAACT +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWASYHLE*HTSSPT
Trigger: AGTTGGTGAAGAAGTATGGCATTCCAAGTGGTATGA...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAATCCCCTTGGACTGGCTaGGTCTTGAACTCGGAGGCC +
Preference number: 4 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQSPWTG*VLNSEA
Trigger: GGCCTCCGAGTTCAAGACGCAGCCAGTCCAAGGGGA...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316851.12
CDS-3UTR GCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACACCATCCTCTCCCATCTaGCCTTCGAGCTTAGGTGCA +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTPSSPI*PSSLGA
Trigger: TGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGG...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATGAGCCGCCGTCATCCTaGTTGATCAGGTTCACTTTA +
Preference number: 4 (lower is better)
Translates to: PGSHILLCALRSLFMFLYEPPSS*LIRFTL
Trigger: TAAAGTGAACCTGATCAAGCAGGATGACGGCGGCTC...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GGTGTGGCAAAGCCATCGACATTACAAGATGAAGAACTGAGTCCACTGAACAGCTCACCCATCATGCTTTaGTCTCGTTCTCCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: GVAKPSTLQDEELSPLNSSPIML*SRSPLS
Trigger: AGACAAAGGAGAACGAGAGCAAAGCATGATGGGTGA...GCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTCTGTGGTGTTGGAAATaGTCTGGTGAAGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPLWCWK*SGEAAV
Trigger: CACAGCAGCTTCACCAGAGCATTTCCAACACCACAG...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTTCTGAAACTGGTCTGTaGCAATCGGGTAACACCAAG +
Preference number: 4 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSSETGL*QSGNTK
Trigger: CTTGGTGTTACCCGATTGGCACAGACCAGTTTCAGA...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATCTACCCCCAGAAGCTaGAATTTGGCATTCGTCCTA +
Preference number: 4 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLSTPRS*NLAFVL
Trigger: TAGGACGAATGCCAAATTGCAGCTTCTGGGGGTAGA...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTACCCAGAGGCAGCCTTaGCACCCTAACCTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGTQRQP*HPNLLL
Trigger: CAGCAAGAGGTTAGGGTGGCAAGGCTGCCTCTGGGT...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTAGTGACCAGAAGAGCCTaGCCCTCACTGCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLVTRRA*PSLLGP
Trigger: AGGGCCCAGCAGTGAGGGGCAGGCTCTTCTGGTCAC...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CAGACACCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTAGCAGAACTTGGCCATaGCGGTCTTCATGTGAATAC +
Preference number: 4 (lower is better)
Translates to: QTPRLSHSTVCSKISLHVSRTWP*RSSCEY
Trigger: GTATTCACATGAAGACCGGCATGGCCAAGTTCTGCT...AACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGGTGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CAGACACCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCCCGAAGTACAGAATaGTGGGTAGGGATGTTAATG +
Preference number: 4 (lower is better)
Translates to: QTPRLSHSTVCSKISLHVPRSTE*WVGMLM
Trigger: CATTAACATCCCTACCCAGCATTCTGTACTTCGGGG...AACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGGTGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAGGTTCCCGGACTGGCTaGGTCTTGAACTCGGAGGCC +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKGSRTG*VLNSEA
Trigger: GGCCTCCGAGTTCAAGACGCAGCCAGTCCGGGAACC...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533073.5
CDS-3UTR GCA 90 bp AGGGAGGACAAGGAGCACAGAGTTAGAATGAGGGGAATGTGTGGTGATTTTAACGACAAAGGTGTAGGATaGAGAATTGCCTCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: REDKEHRVRMRGMCGDFNDKGVG*RIASQG
Trigger: ACCTTGGGAGGCAATTCTGCATCCTACACCTTTGTC...GTTAAAATCACCACACATTCCCCTCATTCTAACTCTGTGCTCCTTGTCCTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCCCCTTCGAGCTTAGGTaGACTGGGTTCCCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFIPFELR*TGFPWD
Trigger: GTCCCAGGGGAACCCAGTGCACCTAAGCTCGAAGGG...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAGACACCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTAGCATTGTAATCTGCTaGCTGGGAGGGATGTTCTTG +
Preference number: 4 (lower is better)
Translates to: QTPRLSHSTVCSKISLHVSIVIC*LGGMFL
Trigger: CAAGAACATCCCTCCCAGCCAGCAGATTACAATGCT...AACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGGTGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ATCCACTCCCAACACAGCTTGCTTGCTCATCCTAAAATGATACTATTGCTAAGTACGCTGATCTCCCCCTaGCTGGGAACAATATCCACC +
Preference number: 4 (lower is better)
Translates to: IHSQHSLLAHPKMILLLSTLISP*LGTIST
Trigger: GGTGGATATTGTTCCCAGCCAGGGGGAGATCAGCGT...ACTTAGCAATAGTATCATTTTAGGATGAGCAAGCAAGCTGTGTTGGGAGTGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CCA 90 bp TGGCGGCTAATCAGAAAGTGGTCTAACCCCCAAAGAAACACAAAAATAACCAAAACGCTGATCTCCCCCTaGCTGGGAACAATATCCACC +
Preference number: 4 (lower is better)
Translates to: WRLIRKWSNPQRNTKITKTLISP*LGTIST
Trigger: GGTGGATATTGTTCCCAGCCAGGGGGAGATCAGCGT...TTTGGTTATTTTTGTGTTTCTTTGGGGGTTAGACCACTTTCTGATTAGCCGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACACTCCCGGAACTCCTGTaGGGTTGGCGCATTCTTGAA +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTLPELL*GWRILE
Trigger: TTCAAGAATGCGCCAACCCCACAGGAGTTCCGGGAG...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGGCGGCTAATCAGAAAGTGGTCTAACCCCCAAAGAAACACAAAAATAACCAAACCAGATGATGGTTGGTaGGAGGGAGCTGACCACATC +
Preference number: 4 (lower is better)
Translates to: WRLIRKWSNPQRNTKITKPDDGW*EGADHI
Trigger: GATGTGGTCAGCTCCCTCCCACCAACCATCATCTGG...TTTGGTTATTTTTGTGTTTCTTTGGGGGTTAGACCACTTTCTGATTAGCCGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACAGGCCGAGGTTGGCGGTaGCATTCACAATATTCTGCC +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTGRGWR*HSQYSA
Trigger: GGCAGAATATTGTGAATGCCACCGCCAACCTCGGCC...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGGCGGCTAATCAGAAAGTGGTCTAACCCCCAAAGAAACACAAAAATAACCAAAGGCCGAGGTTGGCGGTaGCATTCACAATATTCTGCC +
Preference number: 4 (lower is better)
Translates to: WRLIRKWSNPQRNTKITKGRGWR*HSQYSA
Trigger: GGCAGAATATTGTGAATGCCACCGCCAACCTCGGCC...TTTGGTTATTTTTGTGTTTCTTTGGGGGTTAGACCACTTTCTGATTAGCCGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCCGGACTGGCCGAGGTTaGCGGTGGCATTCACAATAT +
Preference number: 4 (lower is better)
Translates to: VVSMFHLVKSFITREKAPRTGRG*RWHSQY
Trigger: ATATTGTGAATGCCACCGCCAACCTCGGCCAGTCCG...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACACCTTTGTCCAGCTCATaGTGGGCTCTGGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTPLSSS*WALGSL
Trigger: AAGGCTTCCCAGAGCCCACCATGAGCTGGACAAAGG...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTAATTCCATGGCAGTCTaGTTCTCTACATATGTGATT +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEANSMAV*FSTYVI
Trigger: AATCACATATGTAGAGAACCAGACTGCCATGGAATT...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTGGCCGATGGTGTTGCTaGCGGTGCAGATGTACTCTC +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFGRWCC*RCRCTL
Trigger: GAGAGTACATCTGCACCGCCAGCAACACCATCGGCC...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAAATGGACTGGGAGTCCTaGCCGATGGTGTTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQMDWES*PMVLLA
Trigger: CGCCAGCAACACCATCGGCCAGGACTCCCAGTCCAT...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTGAAACCATGAGATCGTaGCACTGGGATAGGCAAATA +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFETMRS*HWDRQI
Trigger: TATTTGCCTATCCCAGTGCCACGATCTCATGGTTTC...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTGAGCTTGGCAGCAGCTaGCCATCCCGAAACCATGAG +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFELGSS*PSRNHE
Trigger: CTCATGGTTTCGGGATGGCCAGCTGCTGCCAAGCTC...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTAATCATTCTCAGAGTCTaGGGTCACCTCCAGATAGCT +
Preference number: 4 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLIILRV*GHLQIA
Trigger: AGCTATCTGGAGGTGACCCCAGACTCTGAGAATGAT...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTGGCTGTGCTGGAGTATaGCTCCACCTGGTCGATGGA +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFGCAGV*LHLVDG
Trigger: TCCATCGACCAGGTGGAGCCATACTCCAGCACAGCC...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTGGCTGTGCTGGAGTATaGCTCCACCTGGTCGATGGA +
Preference number: 4 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGGCAGV*LHLVDG
Trigger: TCCATCGACCAGGTGGAGCCATACTCCAGCACAGCC...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCTGGGCACCCCACCTGTaGCCTCTGGTTCATCAAACT +
Preference number: 4 (lower is better)
Translates to: VVSMFHLVKSFITREKAPWAPHL*PLVHQT
Trigger: AGTTTGATGAACCAGAGGCCACAGGTGGGGTGCCCA...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGTGGCATCATACCACTTaGAATGCCATACTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: NKREGPRSTECWVGMLMEWHHTT*NAILLH
Trigger: GTGAAGAAGTATGGCATTCCAAGTGGTATGATGCCA...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTGACTTCAGCATGACGTaGTCACTGCCAGACGGGAGC +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFDFSMT*SLPDGS
Trigger: GCTCCCGTCTGGCAGTGACCACGTCATGCTGAAGTC...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTAGGGATGGCTGTGGGCTaGGCCGAGGTCCTGAACACA +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLGMAVG*AEVLNT
Trigger: TGTGTTCAGGACCTCGGCCCAGCCCACAGCCATCCC...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTTTCGAACCTCCACGATaGGCTCCTTGGACTCATCTT +
Preference number: 4 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFFEPPR*APWTHL
Trigger: AAGATGAGTCCAAGGAGCCCATCGTGGAGGTTCGAA...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCGCTCCGTCAGTGGCGTaGTCTCGTTGGGCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFIAPSVA*SRWALC
Trigger: ACACAGAGCCCAACGAGACCACGCCACTGACGGAGC...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTTGTCTCCTGGCACTCTaGCTTTGCTTCTACGGGGCC +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFCLLAL*LCFYGA
Trigger: GGCCCCGTAGAAGCAAAGCCAGAGTGCCAGGAGACA...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAGACACCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTTTCGTTTCTGTCTCCTaGCACTCTGGCTTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: QTPRLSHSTVCSKISLHVFVSVS*HSGFAS
Trigger: AGAAGCAAAGCCAGAGTGCCAGGAGACAGAAACGAA...AACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGGTGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTGCGTGTGTGTGTCTGTaGTGTTGGAAATGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFACVCL*CWKCSG
Trigger: ACCAGAGCATTTCCAACACCACAGACACACACACGC...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATGCGTGTGTGTGTCTGTaGTGTTGGAAATGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: PGSHILLCALRSLFMFLYACVCL*CWKCSG
Trigger: ACCAGAGCATTTCCAACACCACAGACACACACACGC...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTCCAGAAGCTGCAATTTaGCATTCGTCCTATAAAATA +
Preference number: 4 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAPEAAI*HSSYKI
Trigger: TATTTTATAGGACGAATGCCAAATTGCAGCTTCTGG...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACAGGGCTTGGCCTGGTGTaGCAAAGCCATCGACATTAC +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTGLGLV*QSHRHY
Trigger: GTAATGTCGATGGCTTTGCCACACCAGGCCAAGCCC...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATCCTCAAGTGAAAACCTaGGACTCGGAAGGCTCCATA +
Preference number: 4 (lower is better)
Translates to: PGSHILLCALRSLFMFLYPQVKT*DSEGSI
Trigger: TATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGG...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAACGAAGTACAGAATGCTaGGTAGGGATGTTAATGGAG +
Preference number: 4 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCERSTEC*VGMLME
Trigger: CTCCATTAACATCCCTACCCAGCATTCTGTACTTCG...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCGAATGGAAACAAAGGTaGTATCGATGTTTCACTTGG +
Preference number: 4 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSEWKQR*YRCFTW
Trigger: CCAAGTGAAACATCGATACCACCTTTGTTTCCATTC...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGACTGGGTTCCCGGACTaGCTGCGTCTTGAACTCGGA +
Preference number: 4 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLTGFPD*LRLELG
Trigger: TCCGAGTTCAAGACGCAGCCAGTCCGGGAACCCAGT...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533073.5
CDS-3UTR CCA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTTACCTCTTGCTTCTCTaGTCGAGTCCACGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELYLLLL*SSPRSL
Trigger: AAGGCTTCGTGGACTCGACCAGAGAAGCAAGAGGTA...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615285.4
CDS-3UTR CCA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGTGGTGGTCTCACTGGTaGGGCTGTTCTGAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLWWSHW*GCSEQW
Trigger: CCACTGCTCAGAACAGCCCCACCAGTGAGACCACCA...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR CCA 90 bp CAACAAGTAGCAGATATGCAGAAACTTCTCTGTAAATCTAGCATGATGGTTTTTTCCTGTGGGTGGTCCTaGGATCAGGGGGAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: QQVADMQKLLCKSSMMVFSCGWS*DQGEAD
Trigger: GTCTGCCTCCCCCTGATCCCAGGACCACCCACAGGA...AAAAACCATCATGCTAGATTTACAGAGAAGTTTCTGCATATCTGCTACTTGTTG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCGAAAGATCTTCACGTTaGCGGTGGCCTCTGACTCAC +
Preference number: 4 (lower is better)
Translates to: VVSMFHLVKSFITREKAPERSSR*RWPLTH
Trigger: GTGAGTCAGAGGCCACCGTCAACGTGAAGATCTTTC...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTTTGAACATGAGCTTCTaGAAGATCTTCACGTTGACG +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFLNMSF*KIFTLT
Trigger: CGTCAACGTGAAGATCTTTCAGAAGCTCATGTTCAA...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp GGTGTGGCAAAGCCATCGACATTACAAGATGAAGAACTGAGTCCACTGAACAGCTTGAACATGAGCTTCTaGAAGATCTTCACGTTGACG +
Preference number: 4 (lower is better)
Translates to: GVAKPSTLQDEELSPLNSLNMSF*KIFTLT
Trigger: CGTCAACGTGAAGATCTTTCAGAAGCTCATGTTCAA...GCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACATTGGTGGGAGGGAGCTaGCCACATCACACACAATCA +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTLVGGS*PHHTQS
Trigger: TGATTGTGTGTGATGTGGTCAGCTCCCTCCCACCAA...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TGGCGGCTAATCAGAAAGTGGTCTAACCCCCAAAGAAACACAAAAATAACCAAACTTTGTGTTTCCAGATaGTGGTTGGTGGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: WRLIRKWSNPQRNTKITKLCVSR*WLVGGS
Trigger: GCTCCCTCCCACCAACCATCATCTGGAAACACAAAG...TTTGGTTATTTTTGTGTTTCTTTGGGGGTTAGACCACTTTCTGATTAGCCGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCCCTCATCTGTTTTCTTaGTGCCCCGGATCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: VVSMFHLVKSFITREKAPPHLFS*CPGSAG
Trigger: ACCTGCAGATCCGGGGCATCAAGAAAACAGATGAGG...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
46% GC, longest homopolymer 7 nt, total homopolymer stretches 24 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTACATTCACAATGACCTaGATGTCCTTGAAGTTGATC +
Preference number: 4 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLTFTMT*MSLKLI
Trigger: GATCAACTTCAAGGACATTCAGGTCATTGTGAATGT...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp AACATAGGTGGCTTTGCCCCTCAGACCACAGCATGGGATCATTTGGAATCCCAAACATTCACAATGACCTaGATGTCCTTGAAGTTGATC +
Preference number: 4 (lower is better)
Translates to: NIGGFAPQTTAWDHLESQTFTMT*MSLKLI
Trigger: GATCAACTTCAAGGACATTCAGGTCATTGTGAATGT...TTGGGATTCCAAATGATCCCATGCTGTGGTCTGAGGGGCAAAGCCACCTATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTGGGAACTATCGTCGCTaGAGATGTACTTCTCATCGT +
Preference number: 4 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPGNYRR*RCTSHR
Trigger: ACGATGAGAAGTACATCTTCAGCGACGATAGTTCCC...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp ACGAGGACTGAAAGCACATCCCAGAACGTTCATCAGCCCCAGAAAATATCCAACTCTTATCCACCTTTTTaGTGGTCAGCTGGGAACTAT +
Preference number: 4 (lower is better)
Translates to: TRTESTSQNVHQPQKISNSYPPF*WSAGNY
Trigger: ATAGTTCCCAGCTGACCATCAAAAAGGTGGATAAGA...GTTGGATATTTTCTGGGGCTGATGAACGTTCTGGGATGTGCTTTCAGTCCTCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTGGTTCTCTACATATGTaGTTTTGGGTTTTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWAGSLHM*FWVLQR
Trigger: TCTTTGCAAAACCCAAAATCACATATGTAGAGAACC...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTGGGTGTTGTAGATCTTaGTATTGCTGTAATTGGAGC +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFGCCRS*YCCNWS
Trigger: GCTCCAATTACAGCAATATCAAGATCTACAACACCC...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAAGGGTGTTGTAGATCTTaGTATTGCTGTAATTGGAGC +
Preference number: 4 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCEGCCRS*YCCNWS
Trigger: GCTCCAATTACAGCAATATCAAGATCTACAACACCC...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAACTGGTCGATGGATGGTaGAGAGGGGGTGTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQLVDGW*RGGVCL
Trigger: CAAGCAGACACCCCCTCTTCACCATCCATCGACCAG...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTGTCCTGAACACAAAATaGGCCGCCTTGGATTTTCCT +
Preference number: 4 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFVLNTK*AALDFP
Trigger: AGGAAAATCCAAGGCGGCTCATTTTGTGTTCAGGAC...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GGGAGTTTTTATTCAGTAGAAGGTCCATCCCCAAGCACACACACTGATATTACCGTCCTGAACACAAAATaGGCCGCCTTGGATTTTCCT +
Preference number: 4 (lower is better)
Translates to: GSFYSVEGPSPSTHTDITVLNTK*AALDFP
Trigger: AGGAAAATCCAAGGCGGCTCATTTTGTGTTCAGGAC...GGTAATATCAGTGTGTGTGCTTGGGGATGGACCTTCTACTGAATAAAAACTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAGCTGGGCCGAGGTCCTaGACACAAAATGAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKAGPRS*TQNEPP
Trigger: AGGCGGCTCATTTTGTGTTCAGGACCTCGGCCCAGC...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCTCAGGAAGTAGCAGGTaGTGTCCACAACCACCAGGA +
Preference number: 4 (lower is better)
Translates to: VVSMFHLVKSFITREKAPSGSSR*CPQPPG
Trigger: TCCTGGTGGTTGTGGACATCACCTGCTACTTCCTGA...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACATCAGGAAGTAGCAGGTaGTGTCCACAACCACCAGGA +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTSGSSR*CPQPPG
Trigger: TCCTGGTGGTTGTGGACATCACCTGCTACTTCCTGA...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATTGGAAATGCTCTGGTaGAGCTGCTGTGTCACTTTT +
Preference number: 4 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLLEMLW*SCCVTF
Trigger: AAAAGTGACACAGCAGCTTCACCAGAGCATTTCCAA...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTCTGAATACTGCAAATTaGGATCTACCCCCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSLNTAN*DLPPEA
Trigger: AGCTTCTGGGGGTAGATCTCAATTTGCAGTATTCAG...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATAAGACACTAATTCCCTaGAGCACACATGCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: PGSHILLCALRSLFMFLYKTLIP*STHALP
Trigger: CGGAAGAGCATGTGTGCTTCAGGGAATTAGTGTCTT...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTCATGTTCCTCTATTCTaGGGGCCTGTGCATTTGAAC +
Preference number: 4 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPHVPLF*GPVHLN
Trigger: GTTCAAATGCACAGGCCCTCAGAATAGAGGAACATG...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCCCTGCTCGTCACACTTaGGTGCTCCTCCAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFIPARHT*VLLQQN
Trigger: GTTCTGCTGGAGGAGCACTCAAGTGTGACGAGCAGG...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTATGTTAATGGAGGTCTaGAAACCGCCATCCAGACAG +
Preference number: 4 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELMLMEV*KPPSRQ
Trigger: CTGTCTGGATGGCGGTTTTCAGACCTCCATTAACAT...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GGTGTGGCAAAGCCATCGACATTACAAGATGAAGAACTGAGTCCACTGAACAGCCAGTATTTACACCAGTaGGAATGGAAACAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: GVAKPSTLQDEELSPLNSQYLHQ*EWKQRW
Trigger: CCACCTTTGTTTCCATTCTCACTGGTGTAAATACTG...GCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTAAAGGGTTTGTGGTGCTaGCGGAGGCAGCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLKGLWC*RRQPRS
Trigger: AGAGCGAGGCTGCCTCCGTCAGCACCACAAACCCTT...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR TCA 90 bp ATATTTAGGTTTGAACCCAAAATGCAACAAGTAGCAGATATGCAGAAACTTCTCGCATTCAGGAAGCACTaGCAGGTTGGCTCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: IFRFEPKMQQVADMQKLLAFRKH*QVGSAP
Trigger: TGGGGCCGAGCCAACCTGTCAGTGCTTCCTGAATGC...GAGAAGTTTCTGCATATCTGCTACTTGTTGCATTTTGGGTTCAAACCTAAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTAGGCCCGGGTTCGTTTTaGTGGAACTGGGATGGGAGC +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLGPGSF*WNWDGS
Trigger: GCTCCCATCCCAGTTCCATCAAAACGAACCCGGGCC...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CAACACAGCTTGCTTGCTCATCCTAAAATGATACTATTGCTAAGTAATGTCTACTGCAGAATTGTTTCCTaGCAGCGGCAGCCGAGCTGC +
Preference number: 4 (lower is better)
Translates to: QHSLLAHPKMILLLSNVYCRIVS*QRQPSC
Trigger: GCAGCTCGGCTGCCGCTGGCAGGAAACAATTCTGCA...GTAGACATTACTTAGCAATAGTATCATTTTAGGATGAGCAAGCAAGCTGTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR GCA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTCTAGGGGCAGACAATTaGCAGGCTGAGTATGATTAT +
Preference number: 4 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSLGADN*QAEYDY
Trigger: ATAATCATACTCAGCCTGGCAATTGTCTGCCCCTAG...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTACTAGGGGCAGACAATTaGCAGGCTGAGTATGATTAT +
Preference number: 4 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLLGADN*QAEYDY
Trigger: ATAATCATACTCAGCCTGGCAATTGTCTGCCCCTAG...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ATCCACTCCCAACACAGCTTGCTTGCTCATCCTAAAATGATACTATTGCTAAGTTGGGAGGGATGTTCTTaGCGCGGTAAATTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: IHSQHSLLAHPKMILLLSWEGCS*RGKFCA
Trigger: GGCACAGAATTTACCGCGGCAAGAACATCCCTCCCA...ACTTAGCAATAGTATCATTTTAGGATGAGCAAGCAAGCTGTGTTGGGAGTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR GCA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTCACCTGCAGAGAAACTaGAGTTCCCAGGAAAAACAA +
Preference number: 4 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSHLQRN*SSQEKQ
Trigger: TTGTTTTTCCTGGGAACTGCAGTTTCTCTGCAGGTG...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TGGCGGCTAATCAGAAAGTGGTCTAACCCCCAAAGAAACACAAAAATAACCAAAACCACTGAGATCCGCTaGTGGTTTGGGGTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: WRLIRKWSNPQRNTKITKTTEIR*WFGVSF
Trigger: AAAGCTCACCCCAAACCAGCAGCGGATCTCAGTGGT...TTTGGTTATTTTTGTGTTTCTTTGGGGGTTAGACCACTTTCTGATTAGCCGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTCCTTGTTCTCAGCAATaGAGATGTACTCAGCCTCGT +
Preference number: 4 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELPCSQQ*RCTQPR
Trigger: ACGAGGCTGAGTACATCTGCATTGCTGAGAACAAGG...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATCCTTGTTCTCAGCAATaGAGATGTACTCAGCCTCGT +
Preference number: 4 (lower is better)
Translates to: PGSHILLCALRSLFMFLYPCSQQ*RCTQPR
Trigger: ACGAGGCTGAGTACATCTGCATTGCTGAGAACAAGG...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTTGGATGGTCGCATCCTaGTCGCCAGCCTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFWMVAS*SPALFS
Trigger: TGAGAACAAGGCTGGCGAGCAGGATGCGACCATCCA...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCCCATCCAGAGTCTCTTaGTTCTCTGGTCGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: VVSMFHLVKSFITREKAPPSRVS*FSGRVH
Trigger: GTGGACTCGACCAGAGAAGCAAGAGACTCTGGATGG...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
46% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000316851.12
ENST00000615112.4
CDS-3UTR GCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACACATCAGTGTACTGGATaGTCTTCAGGGTCAGCGACG +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTHQCTG*SSGSAT
Trigger: CGTCGCTGACCCTGAAGAGCATCCAGTACACTGATG...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TGGCGGCTAATCAGAAAGTGGTCTAACCCCCAAAGAAACACAAAAATAACCAAATCTGGTTCATCAAACTaGACCTGGGCTGTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: WRLIRKWSNPQRNTKITKSGSSN*TWAVLE
Trigger: CTCCAGCACAGCCCAGGTGCAGTTTGATGAACCAGA...TTTGGTTATTTTTGTGTTTCTTTGGGGGTTAGACCACTTTCTGATTAGCCGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACATCTGGTTCATCAAACTaGACCTGGGCTGTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTSGSSN*TWAVLE
Trigger: CTCCAGCACAGCCCAGGTGCAGTTTGATGAACCAGA...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAATACTTCTTCACCAACTaGTCTCCACTCAGCTTTGTA +
Preference number: 4 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCEYFFTN*SPLSFV
Trigger: TACAAAGCTGAGTGGAGAGCAGTTGGTGAAGAAGTA...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTTACTTCTTCACCAACTaGTCTCCACTCAGCTTTGTA +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFYFFTN*SPLSFV
Trigger: TACAAAGCTGAGTGGAGAGCAGTTGGTGAAGAAGTA...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp TGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTTCATACCACTTGGAATaGCATACTTCTTCACCAACT +
Preference number: 4 (lower is better)
Translates to: WWSCQVLPKGALIFFIGTSYHLE*HTSSPT
Trigger: AGTTGGTGAAGAAGTATGGCATTCCAAGTGGTATGA...AGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTCCATCCTCTCCCATCTaGCCTTCGAGCTTAGGTGCA +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFPSSPI*PSSLGA
Trigger: TGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGG...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTCCATCCTCTCCCATCTaGCCTTCGAGCTTAGGTGCA +
Preference number: 4 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGPSSPI*PSSLGA
Trigger: TGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGG...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCCTGGCACTCTGGCTTTaGTTCTACGGGGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFILALWL*FYGALL
Trigger: GAGAAGGGCCCCGTAGAAGCAAAGCCAGAGTGCCAG...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTTCTGAAACTGGTCTGTaGCAATCGGGTAACACCAAG +
Preference number: 4 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELSETGL*QSGNTK
Trigger: CTTGGTGTTACCCGATTGGCACAGACCAGTTTCAGA...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTTCTACCCCCAGAAGCTaGAATTTGGCATTCGTCCTA +
Preference number: 4 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELSTPRS*NLAFVL
Trigger: TAGGACGAATGCCAAATTGCAGCTTCTGGGGGTAGA...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACACTCGTCACACTTGAGTaGTCCTCCAGCAGAACTTGG +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTLVTLE*SSSRTW
Trigger: CCAAGTTCTGCTGGAGGAGCACTCAAGTGTGACGAG...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTATATACACCACAGCCCTaGAGGGTCCAGTGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLYTPQP*RVQWPC
Trigger: GCAGGGCCACTGGACCCTGCAGGGCTGTGGTGTATA...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTCCCCGAAGTACAGAATaGTGGGTAGGGATGTTAATG +
Preference number: 4 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPPRSTE*WVGMLM
Trigger: CATTAACATCCCTACCCAGCATTCTGTACTTCGGGG...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTAGTATTCCGACAGAATaGAAAGTCAAAATTCTCAGT +
Preference number: 4 (lower is better)
Translates to: VCVRACVCLWCWKCSGEASIPTE*KVKILS
Trigger: ACTGAGAATTTTGACTTTGCATTCTGTCGGAATACT...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TTCCTCTGCTACATCATATTTAGGTTTGAACCCAAAATGCAACAAGTAGCAGATCCCAAAAACCATGCCTaGCTCCACTGCCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: FLCYIIFRFEPKMQQVADPKNHA*LHCPGV
Trigger: CACACCAGGGCAGTGGAGGCAGGCATGGTTTTTGGG...ATCTGCTACTTGTTGCATTTTGGGTTCAAACCTAAATATGATGTAGCAGAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp ATATTTAGGTTTGAACCCAAAATGCAACAAGTAGCAGATATGCAGAAACTTCTCCTGAGCAAGGTGGGGTaGACTCACTCCTGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: IFRFEPKMQQVADMQKLLLSKVG*THSCRV
Trigger: GACCCTGCAGGAGTGAGTGCACCCCACCTTGCTCAG...GAGAAGTTTCTGCATATCTGCTACTTGTTGCATTTTGGGTTCAAACCTAAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAACCCTTCGAGCTTAGGTaGACTGGGTTCCCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKPFELR*TGFPWD
Trigger: GTCCCAGGGGAACCCAGTGCACCTAAGCTCGAAGGG...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATAGCATTGTAATCTGCTaGCTGGGAGGGATGTTCTTG +
Preference number: 4 (lower is better)
Translates to: PGSHILLCALRSLFMFLYSIVIC*LGGMFL
Trigger: CAAGAACATCCCTCCCAGCCAGCAGATTACAATGCT...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GGGAGTTTTTATTCAGTAGAAGGTCCATCCCCAAGCACACACACTGATATTACCAGCATTGTAATCTGCTaGCTGGGAGGGATGTTCTTG +
Preference number: 4 (lower is better)
Translates to: GSFYSVEGPSPSTHTDITSIVIC*LGGMFL
Trigger: CAAGAACATCCCTCCCAGCCAGCAGATTACAATGCT...GGTAATATCAGTGTGTGTGCTTGGGGATGGACCTTCTACTGAATAAAAACTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGACGCTGATCTCCCCCTaGCTGGGAACAATATCCACC +
Preference number: 4 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLTLISP*LGTIST
Trigger: GGTGGATATTGTTCCCAGCCAGGGGGAGATCAGCGT...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAGACACCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTGCATCTCCTGCCACTTaGCATAAGAAGAATTTGGAC +
Preference number: 4 (lower is better)
Translates to: QTPRLSHSTVCSKISLHVASPAT*HKKNLD
Trigger: GTCCAAATTCTTCTTATGCCAAGTGGCAGGAGATGC...AACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGGTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTAGCATCTCCTGCCACTTaGCATAAGAAGAATTTGGAC +
Preference number: 4 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLASPAT*HKKNLD
Trigger: GTCCAAATTCTTCTTATGCCAAGTGGCAGGAGATGC...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ACGTTTAGCAATTTGGGAAAACCAACGAGAGATGTCATTTGCATTGCTTTTGAGCTCCCGGAACTCCTGTaGGGTTGGCGCATTCTTGAA +
Preference number: 4 (lower is better)
Translates to: TFSNLGKPTRDVICIAFELPELL*GWRILE
Trigger: TTCAAGAATGCGCCAACCCCACAGGAGTTCCGGGAG...CTCAAAAGCAATGCAAATGACATCTCTCGTTGGTTTTCCCAAATTGCTAAACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CCA 90 bp CCAGTTTTAGGAAATAATATGGATTTGTTCATCCACTCCCAACACAGCTTGCTTGGCCGAGGTTGGCGGTaGCATTCACAATATTCTGCC +
Preference number: 4 (lower is better)
Translates to: PVLGNNMDLFIHSQHSLLGRGWR*HSQYSA
Trigger: GGCAGAATATTGTGAATGCCACCGCCAACCTCGGCC...AAGCAAGCTGTGTTGGGAGTGGATGAACAAATCCATATTATTTCCTAAAACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTAGACGACACACGGGCATaGCTACGCACCACCATGTGC +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLDDTRA*LRTTMC
Trigger: GCACATGGTGGTGCGTAGCCATGCCCGTGTGTCGTC...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CTCTGCTACATCATATTTAGGTTTGAACCCAAAATGCAACAAGTAGCAGATATGGGCCGATGGTGTTGCTaGCGGTGCAGATGTACTCTC +
Preference number: 4 (lower is better)
Translates to: LCYIIFRFEPKMQQVADMGRWCC*RCRCTL
Trigger: GAGAGTACATCTGCACCGCCAGCAACACCATCGGCC...CATATCTGCTACTTGTTGCATTTTGGGTTCAAACCTAAATATGATGTAGCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTTCAAGGTACATGGACTaGGAGTCCTGGCCGATGGTG +
Preference number: 4 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGSRYMD*ESWPMV
Trigger: CACCATCGGCCAGGACTCCCAGTCCATGTACCTTGA...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTTCAAGGTACATGGACTaGGAGTCCTGGCCGATGGTG +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFSRYMD*ESWPMV
Trigger: CACCATCGGCCAGGACTCCCAGTCCATGTACCTTGA...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGTCAAGGTACATGGACTaGGAGTCCTGGCCGATGGTG +
Preference number: 4 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLSRYMD*ESWPMV
Trigger: CACCATCGGCCAGGACTCCCAGTCCATGTACCTTGA...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTAGAAACCATGAGATCGTaGCACTGGGATAGGCAAATA +
Preference number: 4 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLETMRS*HWDRQI
Trigger: TATTTGCCTATCCCAGTGCCACGATCTCATGGTTTC...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAAGAGCTTGGCAGCAGCTaGCCATCCCGAAACCATGAG +
Preference number: 4 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQELGSS*PSRNHE
Trigger: CTCATGGTTTCGGGATGGCCAGCTGCTGCCAAGCTC...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TTCCTCTGCTACATCATATTTAGGTTTGAACCCAAAATGCAACAAGTAGCAGATGGCTGTGCTGGAGTATaGCTCCACCTGGTCGATGGA +
Preference number: 4 (lower is better)
Translates to: FLCYIIFRFEPKMQQVADGCAGV*LHLVDG
Trigger: TCCATCGACCAGGTGGAGCCATACTCCAGCACAGCC...ATCTGCTACTTGTTGCATTTTGGGTTCAAACCTAAATATGATGTAGCAGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCTCATCAAACTGCACCTaGGCTGTGCTGGAGTATGGC +
Preference number: 4 (lower is better)
Translates to: VVSMFHLVKSFITREKAPSSNCT*AVLEYG
Trigger: GCCATACTCCAGCACAGCCCAGGTGCAGTTTGATGA...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTTGGGCACCCCACCTGTaGCCTCTGGTTCATCAAACT +
Preference number: 4 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGWAPHL*PLVHQT
Trigger: AGTTTGATGAACCAGAGGCCACAGGTGGGGTGCCCA...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTCGATGCCCTCCATGCTaGCTTCCTTGGCATCATACC +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFRCPPC*LPWHHT
Trigger: GGTATGATGCCAAGGAAGCCAGCATGGAGGGCATCG...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACACCACGATGGGCTCCTTaGACTCATCTTTCGAGAAGG +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTPRWAP*THLSRR
Trigger: CCTTCTCGAAAGATGAGTCCAAGGAGCCCATCGTGG...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGGCGGCTAATCAGAAAGTGGTCTAACCCCCAAAGAAACACAAAAATAACCAAATGTTTCCCTCCATCATaGTTTGGGGTCCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: WRLIRKWSNPQRNTKITKCFPPS*FGVLSS
Trigger: GGAGGAGAGGACCCCAAACCATGATGGAGGGAAACA...TTTGGTTATTTTTGTGTTTCTTTGGGGGTTAGACCACTTTCTGATTAGCCGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTAGCTCCGTCAGTGGCGTaGTCTCGTTGGGCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLAPSVA*SRWALC
Trigger: ACACAGAGCCCAACGAGACCACGCCACTGACGGAGC...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCGACTTCGGCTGGCGCTaGCTTCGTTTCTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFIDFGWR*LRFCLL
Trigger: CAGGAGACAGAAACGAAGCCAGCGCCAGCCGAAGTC...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAAGACTTCGGCTGGCGCTaGCTTCGTTTCTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQDFGWR*LRFCLL
Trigger: CAGGAGACAGAAACGAAGCCAGCGCCAGCCGAAGTC...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTCGTCTTGACTTCGGCTaGCGCTGGCTTCGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGRLDFG*RWLRFC
Trigger: ACAGAAACGAAGCCAGCGCCAGCCGAAGTCAAGACG...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTCGTCTTGACTTCGGCTaGCGCTGGCTTCGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFRLDFG*RWLRFC
Trigger: ACAGAAACGAAGCCAGCGCCAGCCGAAGTCAAGACG...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCCCAGAAGCTGCAATTTaGCATTCGTCCTATAAAATA +
Preference number: 4 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSPEAAI*HSSYKI
Trigger: TATTTTATAGGACGAATGCCAAATTGCAGCTTCTGG...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTACGGCTAATCAGAAAGTaGTCTAACCCCCAAAGAAAC +
Preference number: 4 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLRLIRK*SNPQRN
Trigger: GTTTCTTTGGGGGTTAGACCACTTTCTGATTAGCCG...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTCGGCTAATCAGAAAGTaGTCTAACCCCCAAAGAAAC +
Preference number: 4 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSRLIRK*SNPQRN
Trigger: GTTTCTTTGGGGGTTAGACCACTTTCTGATTAGCCG...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACAAAGGGTGAGAACGCCTaGGAGCAGATCCCTTTTCAC +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTKGENA*EQIPFH
Trigger: GTGAAAAGGGATCTGCTCCCAGGCGTTCTCACCCTT...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCAAGGGTGAGAACGCCTaGGAGCAGATCCCTTTTCAC +
Preference number: 4 (lower is better)
Translates to: VVSMFHLVKSFITREKAPKGENA*EQIPFH
Trigger: GTGAAAAGGGATCTGCTCCCAGGCGTTCTCACCCTT...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTGGGCTTGGCCTGGTGTaGCAAAGCCATCGACATTAC +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFGLGLV*QSHRHY
Trigger: GTAATGTCGATGGCTTTGCCACACCAGGCCAAGCCC...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCAGTCTTGACAAGGTATaGCATGGGCTTGGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: VVSMFHLVKSFITREKAPSLDKV*HGLGLV
Trigger: CACCAGGCCAAGCCCATGCCATACCTTGTCAAGACT...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTACGAAGTACAGAATGCTaGGTAGGGATGTTAATGGAG +
Preference number: 4 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLRSTEC*VGMLME
Trigger: CTCCATTAACATCCCTACCCAGCATTCTGTACTTCG...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGGAATGGAAACAAAGGTaGTATCGATGTTTCACTTGG +
Preference number: 4 (lower is better)
Translates to: NKREGPRSTECWVGMLMEEWKQR*YRCFTW
Trigger: CCAAGTGAAACATCGATACCACCTTTGTTTCCATTC...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAGGGTGGTGGTCTCACTaGTGGGGCTGTTCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKGWWSH*WGCSEQ
Trigger: CTGCTCAGAACAGCCCCACCAGTGAGACCACCACCC...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR CCA 90 bp TTCCTCTGCTACATCATATTTAGGTTTGAACCCAAAATGCAACAAGTAGCAGATCAGCAGCTGTGGCCATaGTGGTCCTGCCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: FLCYIIFRFEPKMQQVADQQLWP*WSCQVL
Trigger: AAGAACCTGGCAGGACCACCATGGCCACAGCTGCTG...ATCTGCTACTTGTTGCATTTTGGGTTCAAACCTAAATATGATGTAGCAGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGAAACTCCTTATGAAGTaGCACAAAAGTATCTGTGAG +
Preference number: 4 (lower is better)
Translates to: WSCQVLPKGALIFFIGTGKLLMK*HKSICE
Trigger: CTCACAGATACTTTTGTGCCACTTCATAAGGAGTTT...CCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GTCCTCTCCACACTTAGGACGAGATCTCCAAAGGGTCCCTTCAGAAAGATGGACAAACTCCTTATGAAGTaGCACAAAAGTATCTGTGAG +
Preference number: 4 (lower is better)
Translates to: VLSTLRTRSPKGPFRKMDKLLMK*HKSICE
Trigger: CTCACAGATACTTTTGTGCCACTTCATAAGGAGTTT...GTCCATCTTTCTGAAGGGACCCTTTGGAGATCTCGTCCTAAGTGTGGAGAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp TGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAAAACTCCTTATGAAGTaGCACAAAAGTATCTGTGAG +
Preference number: 4 (lower is better)
Translates to: WPWWSCQVLPKGALIFFIKLLMK*HKSICE
Trigger: CTCACAGATACTTTTGTGCCACTTCATAAGGAGTTT...TATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GAATTCTTCCTCTGCTACATCATATTTAGGTTTGAACCCAAAATGCAACAAGTATGGGCAGTCTGGGAGTaGCCTGTCCCTCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: EFFLCYIIFRFEPKMQQVWAVWE*PVPLLL
Trigger: GAGAAGGAGAGGGACAGGCCACTCCCAGACTGCCCA...TACTTGTTGCATTTTGGGTTCAAACCTAAATATGATGTAGCAGAGGAAGAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp CGTTTAGCAATTTGGGAAAACCAACGAGAGATGTCATTTGCATTGCTTTTGAGAATCATTCCACACCACTaGGATCCGCTGCTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: RLAIWENQREMSFALLLRIIPHH*DPLLVW
Trigger: CCAAACCAGCAGCGGATCTCAGTGGTGTGGAATGAT...TCTCAAAAGCAATGCAAATGACATCTCTCGTTGGTTTTCCCAAATTGCTAAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR TCA 90 bp CCAGTTTTAGGAAATAATATGGATTTGTTCATCCACTCCCAACACAGCTTGCTTGAAAGATCTTCACGTTaGCGGTGGCCTCTGACTCAC +
Preference number: 4 (lower is better)
Translates to: PVLGNNMDLFIHSQHSLLERSSR*RWPLTH
Trigger: GTGAGTCAGAGGCCACCGTCAACGTGAAGATCTTTC...AAGCAAGCTGTGTTGGGAGTGGATGAACAAATCCATATTATTTCCTAAAACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR TCA 90 bp CCAGTTTTAGGAAATAATATGGATTTGTTCATCCACTCCCAACACAGCTTGCTTTTGGTGGGAGGGAGCTaGCCACATCACACACAATCA +
Preference number: 4 (lower is better)
Translates to: PVLGNNMDLFIHSQHSLLLVGGS*PHHTQS
Trigger: TGATTGTGTGTGATGTGGTCAGCTCCCTCCCACCAA...AAGCAAGCTGTGTTGGGAGTGGATGAACAAATCCATATTATTTCCTAAAACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR TCA 90 bp CGTTTAGCAATTTGGGAAAACCAACGAGAGATGTCATTTGCATTGCTTTTGAGACTTTGTGTTTCCAGATaGTGGTTGGTGGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: RLAIWENQREMSFALLLRLCVSR*WLVGGS
Trigger: GCTCCCTCCCACCAACCATCATCTGGAAACACAAAG...TCTCAAAAGCAATGCAAATGACATCTCTCGTTGGTTTTCCCAAATTGCTAAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR TCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTCTTTGTGTTTCCAGATaGTGGTTGGTGGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFLCVSR*WLVGGS
Trigger: GCTCCCTCCCACCAACCATCATCTGGAAACACAAAG...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CCAGTTTTAGGAAATAATATGGATTTGTTCATCCACTCCCAACACAGCTTGCTTCCTCATCTGTTTTCTTaGTGCCCCGGATCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PVLGNNMDLFIHSQHSLLPHLFS*CPGSAG
Trigger: ACCTGCAGATCCGGGGCATCAAGAAAACAGATGAGG...AAGCAAGCTGTGTTGGGAGTGGATGAACAAATCCATATTATTTCCTAAAACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR TCA 90 bp GGTGTGGCAAAGCCATCGACATTACAAGATGAAGAACTGAGTCCACTGAACAGCACATTCACAATGACCTaGATGTCCTTGAAGTTGATC +
Preference number: 4 (lower is better)
Translates to: GVAKPSTLQDEELSPLNSTFTMT*MSLKLI
Trigger: GATCAACTTCAAGGACATTCAGGTCATTGTGAATGT...GCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGTTCTCTACATATGTaGTTTTGGGTTTTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: WWSCQVLPKGALIFFIGTGSLHM*FWVLQR
Trigger: TCTTTGCAAAACCCAAAATCACATATGTAGAGAACC...AGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp TGGCGGCTAATCAGAAAGTGGTCTAACCCCCAAAGAAACACAAAAATAACCAAACTGCTTGAACAAGGATaGATTCCAAGGACTCCTGCC +
Preference number: 4 (lower is better)
Translates to: WRLIRKWSNPQRNTKITKLLEQG*IPRTPA
Trigger: GGCAGGAGTCCTTGGAATTCATCCTTGTTCAAGCAG...TTTGGTTATTTTTGTGTTTCTTTGGGGGTTAGACCACTTTCTGATTAGCCGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTACTGGTCGATGGATGGTaGAGAGGGGGTGTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLLVDGW*RGGVCL
Trigger: CAAGCAGACACCCCCTCTTCACCATCCATCGACCAG...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGTCAGGAAGTAGCAGGTaGTGTCCACAACCACCAGGA +
Preference number: 4 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLSGSSR*CPQPPG
Trigger: TCCTGGTGGTTGTGGACATCACCTGCTACTTCCTGA...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTTTGGAAATGCTCTGGTaGAGCTGCTGTGTCACTTTT +
Preference number: 4 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFLEMLW*SCCVTF
Trigger: AAAAGTGACACAGCAGCTTCACCAGAGCATTTCCAA...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTAGTCTACGTGGGAATTaGATTCAGCTAGAAAGGGTG +
Preference number: 4 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFSLRGN*IQLERV
Trigger: CACCCTTTCTAGCTGAATTCAATTCCCACGTAGACT...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATAGTCTACGTGGGAATTaGATTCAGCTAGAAAGGGTG +
Preference number: 4 (lower is better)
Translates to: PGSHILLCALRSLFMFLYSLRGN*IQLERV
Trigger: CACCCTTTCTAGCTGAATTCAATTCCCACGTAGACT...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTGAATACTGCAAATTaGGATCTACCCCCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFLNTAN*DLPPEA
Trigger: AGCTTCTGGGGGTAGATCTCAATTTGCAGTATTCAG...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTCAGTATTTACACCAGTaGGAATGGAAACAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSQYLHQ*EWKQRW
Trigger: CCACCTTTGTTTCCATTCTCACTGGTGTAAATACTG...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTCCATCCAGAGTCTCATaGGATCCTGGGAAACCTGCA +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFPSRVS*DPGKPA
Trigger: TGCAGGTTTCCCAGGATCTCATGAGACTCTGGATGG...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615285.4
CDS-3UTR GCA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTTGGGAGGGATGTTCTTaGCGCGGTAAATTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGWEGCS*RGKFCA
Trigger: GGCACAGAATTTACCGCGGCAAGAACATCCCTCCCA...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACATGCAGCATTGTAATCTaGTGGCTGGGAGGGATGTTC +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTCSIVI*WLGGMF
Trigger: GAACATCCCTCCCAGCCAGCAGATTACAATGCTGCA...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTATGAGATCCTTAGTTTaGAGCATTGTAATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFMRSLV*SIVICW
Trigger: CCAGCAGATTACAATGCTGCAAACTAAGGATCTCAT...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTACCACTGAGATCCGCTaGTGGTTTGGGGTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFTTEIR*WFGVSF
Trigger: AAAGCTCACCCCAAACCAGCAGCGGATCTCAGTGGT...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGACCACTGAGATCCGCTaGTGGTTTGGGGTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLTTEIR*WFGVSF
Trigger: AAAGCTCACCCCAAACCAGCAGCGGATCTCAGTGGT...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CCAGTTTTAGGAAATAATATGGATTTGTTCATCCACTCCCAACACAGCTTGCTTCCACACACTTGTAAATaGCGGCGTCGTCGATGTTGG +
Preference number: 4 (lower is better)
Translates to: PVLGNNMDLFIHSQHSLLPHTCK*RRRRCW
Trigger: CCAACATCGACGACGCCGGCATTTACAAGTGTGTGG...AAGCAAGCTGTGTTGGGAGTGGATGAACAAATCCATATTATTTCCTAAAACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR GCA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGCCACACACTTGTAAATaGCGGCGTCGTCGATGTTGG +
Preference number: 4 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLPHTCK*RRRRCW
Trigger: CCAACATCGACGACGCCGGCATTTACAAGTGTGTGG...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAACCCGTGCCAGGATTCTaGCCTCACAGCGATAAGTGC +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKPVPGF*PHSDKC
Trigger: GCACTTATCGCTGTGAGGGCAGAATCCTGGCACGGG...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTTGTGATTTTGGGTTTTaGAAAGACTTTGAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: WWSCQVLPKGALIFFIGTCDFGF*KDFEVD
Trigger: ATCCACCTCAAAGTCTTTGCAAAACCCAAAATCACA...AGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp GAATTCTTCCTCTGCTACATCATATTTAGGTTTGAACCCAAAATGCAACAAGTACCTGGCCGATGGTGTTaGTGGCGGTGCAGATGTACT +
Preference number: 4 (lower is better)
Translates to: EFFLCYIIFRFEPKMQQVPGRWC*WRCRCT
Trigger: AGTACATCTGCACCGCCAGCAACACCATCGGCCAGG...TACTTGTTGCATTTTGGGTTCAAACCTAAATATGATGTAGCAGAGGAAGAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCCCCAATGCGGTTCACTaGAGTACAGTTGTAGTTCCC +
Preference number: 4 (lower is better)
Translates to: VVSMFHLVKSFITREKAPPNAVH*STVVVP
Trigger: GGGAACTACAACTGTACTGCAGTGAACCGCATTGGG...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
44% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CATGCACGCATACTCATATGGATTCTTCAGGAGATTCAGGTCCTCCACACACATTACTTCTTCACCAACTaGTCTCCACTCAGCTTTGTA +
Preference number: 4 (lower is better)
Translates to: HARILIWILQEIQVLHTHYFFTN*SPLSFV
Trigger: TACAAAGCTGAGTGGAGAGCAGTTGGTGAAGAAGTA...ATGTGTGTGGAGGACCTGAATCTCCTGAAGAATCCATATGAGTATGCGTGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR GCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAACTGGCACTCTGGCTTTaGTTCTACGGGGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKLALWL*FYGALL
Trigger: GAGAAGGGCCCCGTAGAAGCAAAGCCAGAGTGCCAG...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTACTGGCACTCTGGCTTTaGTTCTACGGGGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLLALWL*FYGALL
Trigger: GAGAAGGGCCCCGTAGAAGCAAAGCCAGAGTGCCAG...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTTCACCCATCATGCTTTaGTCTCGTTCTCCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFSPIML*SRSPLS
Trigger: AGACAAAGGAGAACGAGAGCAAAGCATGATGGGTGA...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTTCTCTTCACCCATCATaGTTTGCTCTCGTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFSLHPS*FALVLL
Trigger: AAGGAGAACGAGAGCAAAGCATGATGGGTGAAGAGA...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCAAGGGTGACACACTTTaGATACTGAACAAATACAAA +
Preference number: 4 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSKGDTL*ILNKYK
Trigger: TTTGTATTTGTTCAGTATGCAAAGTGTGTCACCCTT...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTAAGGGTCCAGTGGCCCTaGTCGTCACACTTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLRVQWP*SSHLSA
Trigger: AGCACTCAAGTGTGACGAGCAGGGCCACTGGACCCT...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CAACAAGTAGCAGATATGCAGAAACTTCTCTGTAAATCTAGCATGATGGTTTTTTGGCCATGGTGGTCCTaGCAGGTTCTTCCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: QQVADMQKLLCKSSMMVFWPWWS*QVLPKG
Trigger: CCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCA...AAAAACCATCATGCTAGATTTACAGAGAAGTTTCTGCATATCTGCTACTTGTTG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCACGCTGATCTCCCCCTaGCTGGGAACAATATCCACC +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFITLISP*LGTIST
Trigger: GGTGGATATTGTTCCCAGCCAGGGGGAGATCAGCGT...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AATTTGGGAAAACCAACGAGAGATGTCATTTGCATTGCTTTTGAGATGAAACGTCGGACTGGCCGAGGTTaGCGGTGGCATTCACAATAT +
Preference number: 4 (lower is better)
Translates to: NLGKPTRDVICIAFEMKRRTGRG*RWHSQY
Trigger: ATATTGTGAATGCCACCGCCAACCTCGGCCAGTCCG...ACGTTTCATCTCAAAAGCAATGCAAATGACATCTCTCGTTGGTTTTCCCAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCCCTTTGTCCAGCTCATaGTGGGCTCTGGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFIPLSSS*WALGSL
Trigger: AAGGCTTCCCAGAGCCCACCATGAGCTGGACAAAGG...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTAATTCCATGGCAGTCTaGTTCTCTACATATGTGATT +
Preference number: 4 (lower is better)
Translates to: WWSCQVLPKGALIFFIGTNSMAV*FSTYVI
Trigger: AATCACATATGTAGAGAACCAGACTGCCATGGAATT...AGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GAATTCTTCCTCTGCTACATCATATTTAGGTTTGAACCCAAAATGCAACAAGTAGGCCGATGGTGTTGCTaGCGGTGCAGATGTACTCTC +
Preference number: 4 (lower is better)
Translates to: EFFLCYIIFRFEPKMQQVGRWCC*RCRCTL
Trigger: GAGAGTACATCTGCACCGCCAGCAACACCATCGGCC...TACTTGTTGCATTTTGGGTTCAAACCTAAATATGATGTAGCAGAGGAAGAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTCAGGTGATGTTCACCTaGTTCCCCTCCCAAGTGTAC +
Preference number: 4 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGQVMFT*FPSQVY
Trigger: GTACACTTGGGAGGGGAACCAGGTGAACATCACCTG...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTGAAACCATGAGATCGTaGCACTGGGATAGGCAAATA +
Preference number: 4 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELETMRS*HWDRQI
Trigger: TATTTGCCTATCCCAGTGCCACGATCTCATGGTTTC...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTAGCTCCACCTGGTCGATaGATGGTGAAGAGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLAPPGR*MVKRGC
Trigger: ACACCCCCTCTTCACCATCCATCGACCAGGTGGAGC...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTTCATCAAACTGCACCTaGGCTGTGCTGGAGTATGGC +
Preference number: 4 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGSSNCT*AVLEYG
Trigger: GCCATACTCCAGCACAGCCCAGGTGCAGTTTGATGA...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGGGCACCCCACCTGTaGCCTCTGGTTCATCAAACT +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFIWAPHL*PLVHQT
Trigger: AGTTTGATGAACCAGAGGCCACAGGTGGGGTGCCCA...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATGGCATCATACCACTTaGAATGCCATACTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLWHHTT*NAILLH
Trigger: GTGAAGAAGTATGGCATTCCAAGTGGTATGATGCCA...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GATCAGGTTCACTTTAATAGAGTTTCCATCCTCTCCCATCTGCCCTTCGAGCTTTGGCATCATACCACTTaGAATGCCATACTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: DQVHFNRVSILSHLPFELWHHTT*NAILLH
Trigger: GTGAAGAAGTATGGCATTCCAAGTGGTATGATGCCA...AAGCTCGAAGGGCAGATGGGAGAGGATGGAAACTCTATTAAAGTGAACCTGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR CCA 90 bp GAATTCTTCCTCTGCTACATCATATTTAGGTTTGAACCCAAAATGCAACAAGTACGGGAGCCTGATCTCTaGTTTCCACTCGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: EFFLCYIIFRFEPKMQQVREPDL*FPLGGE
Trigger: CTCTCCTCCGAGTGGAAACCAGAGATCAGGCTCCCG...TACTTGTTGCATTTTGGGTTCAAACCTAAATATGATGTAGCAGAGGAAGAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGCCACGATGGGCTCCTTaGACTCATCTTTCGAGAAGG +
Preference number: 4 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLPRWAP*THLSRR
Trigger: CCTTCTCGAAAGATGAGTCCAAGGAGCCCATCGTGG...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTTGTTTCCCTCCATCATaGTTTGGGGTCCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFCFPPS*FGVLSS
Trigger: GGAGGAGAGGACCCCAAACCATGATGGAGGGAAACA...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAGACTTCGGCTGGCGCTaGCTTCGTTTCTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKDFGWR*LRFCLL
Trigger: CAGGAGACAGAAACGAAGCCAGCGCCAGCCGAAGTC...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTTCTCCTTTGTCTGTGTaGCGTCATTGGGGACCGTCT +
Preference number: 4 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGSPLSV*RHWGPS
Trigger: AGACGGTCCCCAATGACGCCACACAGACAAAGGAGA...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGGCGGCTAATCAGAAAGTGGTCTAACCCCCAAAGAAACACAAAAATAACCAAAGCGTGTGTGTGTCTGTaGTGTTGGAAATGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: WRLIRKWSNPQRNTKITKACVCL*CWKCSG
Trigger: ACCAGAGCATTTCCAACACCACAGACACACACACGC...TTTGGTTATTTTTGTGTTTCTTTGGGGGTTAGACCACTTTCTGATTAGCCGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCGTGCTAAAGCAAGCGTaGGATGATCCTACCTACCTC +
Preference number: 4 (lower is better)
Translates to: VVSMFHLVKSFITREKAPVLKQA*DDPTYL
Trigger: GAGGTAGGTAGGATCATCCCACGCTTGCTTTAGCAC...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAGAACGTTGGGGAGAGTaGCCCACAGAATGGACCCAG +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKERWGE*PTEWTQ
Trigger: CTGGGTCCATTCTGTGGGCCACTCTCCCCAACGTTC...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAAGGGCTTGGCCTGGTGTaGCAAAGCCATCGACATTAC +
Preference number: 4 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQGLGLV*QSHRHY
Trigger: GTAATGTCGATGGCTTTGCCACACCAGGCCAAGCCC...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTAGGTATGGCATGGGCTTaGCCTGGTGTGGCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLGMAWA*PGVAKP
Trigger: TGGCTTTGCCACACCAGGCCAAGCCCATGCCATACC...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAATTGGAAGGGGTGGCCTaGCCAGCCGGTACAGAGTTT +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKLEGVA*PAGTEF
Trigger: AAACTCTGTACCGGCTGGCCAGGCCACCCCTTCCAA...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR CCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTTTAAAGTCCTCGCCCTaGGAAGGGTTTGTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFLKSSP*EGFVVL
Trigger: CAGCACCACAAACCCTTCCCAGGGCGAGGACTTTAA...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR CCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAACAGAGCTGTCTGCAGTaGAAGGAGCAAGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKQSCLQ*KEQAQG
Trigger: CCCCTGAGCTTGCTCCTTCCACTGCAGACAGCTCTG...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR CCA 90 bp CAACAAGTAGCAGATATGCAGAAACTTCTCTGTAAATCTAGCATGATGGTTTTTCAGCAGCTGTGGCCATaGTGGTCCTGCCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: QQVADMQKLLCKSSMMVFQQLWP*WSCQVL
Trigger: AAGAACCTGGCAGGACCACCATGGCCACAGCTGCTG...AAAAACCATCATGCTAGATTTACAGAGAAGTTTCTGCATATCTGCTACTTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTAAAATCAAGCTTCCATaGAGATGCTCAGAGATGAGA +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFKIKLP*RCSEMR
Trigger: TCTCATCTCTGAGCATCTCCATGGAAGCTTGATTTT...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp CAACAAGTAGCAGATATGCAGAAACTTCTCTGTAAATCTAGCATGATGGTTTTTGAGCGCCAACATAGGTaGCTTTGCCCCTCAGACCAC +
Preference number: 4 (lower is better)
Translates to: QQVADMQKLLCKSSMMVFERQHR*LCPSDH
Trigger: GTGGTCTGAGGGGCAAAGCCACCTATGTTGGCGCTC...AAAAACCATCATGCTAGATTTACAGAGAAGTTTCTGCATATCTGCTACTTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTTTGAACATGAGCTTCTaGAAGATCTTCACGTTGACG +
Preference number: 4 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFLNMSF*KIFTLT
Trigger: CGTCAACGTGAAGATCTTTCAGAAGCTCATGTTCAA...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTTTGAACATGAGCTTCTaGAAGATCTTCACGTTGACG +
Preference number: 4 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELLNMSF*KIFTLT
Trigger: CGTCAACGTGAAGATCTTTCAGAAGCTCATGTTCAA...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCCCTCATCTGTTTTCTTaGTGCCCCGGATCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFIPHLFS*CPGSAG
Trigger: ACCTGCAGATCCGGGGCATCAAGAAAACAGATGAGG...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TGGCGGCTAATCAGAAAGTGGTCTAACCCCCAAAGAAACACAAAAATAACCAAAGGGAACTATCGTCGCTaGAGATGTACTTCTCATCGT +
Preference number: 4 (lower is better)
Translates to: WRLIRKWSNPQRNTKITKGNYRR*RCTSHR
Trigger: ACGATGAGAAGTACATCTTCAGCGACGATAGTTCCC...TTTGGTTATTTTTGTGTTTCTTTGGGGGTTAGACCACTTTCTGATTAGCCGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATTCTTATCCACCTTTTTaGTGGTCAGCTGGGAACTAT +
Preference number: 4 (lower is better)
Translates to: PGSHILLCALRSLFMFLYSYPPF*WSAGNY
Trigger: ATAGTTCCCAGCTGACCATCAAAAAGGTGGATAAGA...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GGTGTGGCAAAGCCATCGACATTACAAGATGAAGAACTGAGTCCACTGAACAGCGGTTCTCTACATATGTaGTTTTGGGTTTTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: GVAKPSTLQDEELSPLNSGSLHM*FWVLQR
Trigger: TCTTTGCAAAACCCAAAATCACATATGTAGAGAACC...GCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAGCCATCCCGAAACCATaGGATCGTGGCACTGGGATA +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKAIPKP*DRGTGI
Trigger: TATCCCAGTGCCACGATCTCATGGTTTCGGGATGGC...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATGGGTGTTGTAGATCTTaGTATTGCTGTAATTGGAGC +
Preference number: 4 (lower is better)
Translates to: PGSHILLCALRSLFMFLYGCCRS*YCCNWS
Trigger: GCTCCAATTACAGCAATATCAAGATCTACAACACCC...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTCAGGAAGTAGCAGGTaGTGTCCACAACCACCAGGA +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFISGSSR*CPQPPG
Trigger: TCCTGGTGGTTGTGGACATCACCTGCTACTTCCTGA...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTAAAGCAAGCGTGGGATaGTCCTACCTACCTCTAGGT +
Preference number: 4 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGKASVG*SYLPLG
Trigger: ACCTAGAGGTAGGTAGGATCATCCCACGCTTGCTTT...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATAGGAAAGTTGTGTTATaGCTCCAGACAGTAGGTTGT +
Preference number: 4 (lower is better)
Translates to: PGSHILLCALRSLFMFLYRKVVL*LQTVGC
Trigger: ACAACCTACTGTCTGGAGTCATAACACAACTTTCCT...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCCATGTTCCTCTATTCTaGGGGCCTGTGCATTTGAAC +
Preference number: 4 (lower is better)
Translates to: VVSMFHLVKSFITREKAPHVPLF*GPVHLN
Trigger: GTTCAAATGCACAGGCCCTCAGAATAGAGGAACATG...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTATCGACATTACAAGATaGAGAACTGAGTCCACTGAA +
Preference number: 4 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSIDITR*RTESTE
Trigger: TTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGAT...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAAAAAACTCTTGCATGCTaGGACAAACCTATGTGTAAT +
Preference number: 4 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCEKTLAC*DKPMCN
Trigger: ATTACACATAGGTTTGTCTCAGCATGCAAGAGTTTT...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATCAGTATTTACACCAGTaGGAATGGAAACAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: PGSHILLCALRSLFMFLYQYLHQ*EWKQRW
Trigger: CCACCTTTGTTTCCATTCTCACTGGTGTAAATACTG...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GAACACTATGAACATGCACGCATACTCATATGGATTCTTCAGGAGATTCAGGTCACTCCCACACAGCTTTaGTGCTTGAACACTATGAAC +
Preference number: 4 (lower is better)
Translates to: EHYEHARILIWILQEIQVTPTQL*CLNTMN
Trigger: GTTCATAGTGTTCAAGCATCAAAGCTGTGTGGGAGT...GACCTGAATCTCCTGAAGAATCCATATGAGTATGCGTGCATGTTCATAGTGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR TCA 90 bp CTCTGCTACATCATATTTAGGTTTGAACCCAAAATGCAACAAGTAGCAGATATGTCTGATGTCTGCACGTaGGCCTCTAAACTGAGCGCT +
Preference number: 4 (lower is better)
Translates to: LCYIIFRFEPKMQQVADMSDVCT*ASKLSA
Trigger: AGCGCTCAGTTTAGAGGCTCACGTGCAGACATCAGA...CATATCTGCTACTTGTTGCATTTTGGGTTCAAACCTAAATATGATGTAGCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp ACGTTTAGCAATTTGGGAAAACCAACGAGAGATGTCATTTGCATTGCTTTTGAGTGCAGCATTGTAATCTaGTGGCTGGGAGGGATGTTC +
Preference number: 4 (lower is better)
Translates to: TFSNLGKPTRDVICIAFECSIVI*WLGGMF
Trigger: GAACATCCCTCCCAGCCAGCAGATTACAATGCTGCA...CTCAAAAGCAATGCAAATGACATCTCTCGTTGGTTTTCCCAAATTGCTAAACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR GCA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTAATGAGATCCTTAGTTTaGAGCATTGTAATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLMRSLV*SIVICW
Trigger: CCAGCAGATTACAATGCTGCAAACTAAGGATCTCAT...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCACCACTGAGATCCGCTaGTGGTTTGGGGTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFITTEIR*WFGVSF
Trigger: AAAGCTCACCCCAAACCAGCAGCGGATCTCAGTGGT...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CAACACAGCTTGCTTGCTCATCCTAAAATGATACTATTGCTAAGTAATGTCTACACCACTGAGATCCGCTaGTGGTTTGGGGTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: QHSLLAHPKMILLLSNVYTTEIR*WFGVSF
Trigger: AAAGCTCACCCCAAACCAGCAGCGGATCTCAGTGGT...GTAGACATTACTTAGCAATAGTATCATTTTAGGATGAGCAAGCAAGCTGTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR GCA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAACCACACACTTGTAAATaGCGGCGTCGTCGATGTTGG +
Preference number: 4 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQPHTCK*RRRRCW
Trigger: CCAACATCGACGACGCCGGCATTTACAAGTGTGTGG...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ATCCACTCCCAACACAGCTTGCTTGCTCATCCTAAAATGATACTATTGCTAAGTGCATTCACAATATTCTaGCTGGCCTGGATGGTAGGT +
Preference number: 4 (lower is better)
Translates to: IHSQHSLLAHPKMILLLSAFTIF*LAWMVG
Trigger: ACCTACCATCCAGGCCAGGCAGAATATTGTGAATGC...ACTTAGCAATAGTATCATTTTAGGATGAGCAAGCAAGCTGTGTTGGGAGTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR GCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCCCTTGTTCTCAGCAATaGAGATGTACTCAGCCTCGT +
Preference number: 4 (lower is better)
Translates to: VVSMFHLVKSFITREKAPPCSQQ*RCTQPR
Trigger: ACGAGGCTGAGTACATCTGCATTGCTGAGAACAAGG...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
43% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GCTCATCCTAAAATGATACTATTGCTAAGTAATGTCTACCACTATCGACCTATTTGGATGGTCGCATCCTaGTCGCCAGCCTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: AHPKMILLLSNVYHYRPIWMVAS*SPALFS
Trigger: TGAGAACAAGGCTGGCGAGCAGGATGCGACCATCCA...AATAGGTCGATAGTGGTAGACATTACTTAGCAATAGTATCATTTTAGGATGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR GCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTTGTGATTTTGGGTTTTaGAAAGACTTTGAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFCDFGF*KDFEVD
Trigger: ATCCACCTCAAAGTCTTTGCAAAACCCAAAATCACA...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAACCATCCAGAGTCTCTTaGTTCTCTGGTCGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQPSRVS*FSGRVH
Trigger: GTGGACTCGACCAGAGAAGCAAGAGACTCTGGATGG...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316851.12
ENST00000615112.4
CDS-3UTR GCA 90 bp TTCCTCTGCTACATCATATTTAGGTTTGAACCCAAAATGCAACAAGTAGCAGATCATCAGTGTACTGGATaGTCTTCAGGGTCAGCGACG +
Preference number: 4 (lower is better)
Translates to: FLCYIIFRFEPKMQQVADHQCTG*SSGSAT
Trigger: CGTCGCTGACCCTGAAGAGCATCCAGTACACTGATG...ATCTGCTACTTGTTGCATTTTGGGTTCAAACCTAAATATGATGTAGCAGAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAATGGTGTTGCTGGCGGTaGAGATGTACTCTCCGGCAT +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKWCCWR*RCTLRH
Trigger: ATGCCGGAGAGTACATCTGCACCGCCAGCAACACCA...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAATCTGGTTCATCAAACTaGACCTGGGCTGTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQSGSSN*TWAVLE
Trigger: CTCCAGCACAGCCCAGGTGCAGTTTGATGAACCAGA...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTTACTTCTTCACCAACTaGTCTCCACTCAGCTTTGTA +
Preference number: 4 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPYFFTN*SPLSFV
Trigger: TACAAAGCTGAGTGGAGAGCAGTTGGTGAAGAAGTA...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATTACTTCTTCACCAACTaGTCTCCACTCAGCTTTGTA +
Preference number: 4 (lower is better)
Translates to: PGSHILLCALRSLFMFLYYFFTN*SPLSFV
Trigger: TACAAAGCTGAGTGGAGAGCAGTTGGTGAAGAAGTA...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATCATACCACTTGGAATaGCATACTTCTTCACCAACT +
Preference number: 4 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLSYHLE*HTSSPT
Trigger: AGTTGGTGAAGAAGTATGGCATTCCAAGTGGTATGA...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTTCATACCACTTGGAATaGCATACTTCTTCACCAACT +
Preference number: 4 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSSYHLE*HTSSPT
Trigger: AGTTGGTGAAGAAGTATGGCATTCCAAGTGGTATGA...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CAACAAGTAGCAGATATGCAGAAACTTCTCTGTAAATCTAGCATGATGGTTTTTCCATCCTCTCCCATCTaGCCTTCGAGCTTAGGTGCA +
Preference number: 4 (lower is better)
Translates to: QQVADMQKLLCKSSMMVFPSSPI*PSSLGA
Trigger: TGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGG...AAAAACCATCATGCTAGATTTACAGAGAAGTTTCTGCATATCTGCTACTTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp ATATTTAGGTTTGAACCCAAAATGCAACAAGTAGCAGATATGCAGAAACTTCTCCCATCCTCTCCCATCTaGCCTTCGAGCTTAGGTGCA +
Preference number: 4 (lower is better)
Translates to: IFRFEPKMQQVADMQKLLPSSPI*PSSLGA
Trigger: TGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGG...GAGAAGTTTCTGCATATCTGCTACTTGTTGCATTTTGGGTTCAAACCTAAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGGAGCCGCCGTCATCCTaGTTGATCAGGTTCACTTTA +
Preference number: 4 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLEPPSS*LIRFTL
Trigger: TAAAGTGAACCTGATCAAGCAGGATGACGGCGGCTC...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTCTGTGGTGTTGGAAATaGTCTGGTGAAGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFLWCWK*SGEAAV
Trigger: CACAGCAGCTTCACCAGAGCATTTCCAACACCACAG...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACATTCCACCTCCAAAGCTaGACTATATACACCACAGCC +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTFHLQS*TIYTTA
Trigger: GGCTGTGGTGTATATAGTGCAGCTTTGGAGGTGGAA...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGAGGAGAGCCCAGGGCTaGAAAAACATCCTTTGCAAG +
Preference number: 4 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLRRAQG*KNILCK
Trigger: CTTGCAAAGGATGTTTTTGCAGCCCTGGGCTCTCCT...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR GCA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAACCTGTCCTTTCTGTCTaGCCACTTGCCAGTTCCATG +
Preference number: 4 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQPVLSV*PLASSM
Trigger: CATGGAACTGGCAAGTGGGCAGACAGAAAGGACAGG...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615285.4
CDS-3UTR CCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCAGCATTGTAATCTGCTaGCTGGGAGGGATGTTCTTG +
Preference number: 4 (lower is better)
Translates to: VVSMFHLVKSFITREKAPSIVIC*LGGMFL
Trigger: CAAGAACATCCCTCCCAGCCAGCAGATTACAATGCT...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAGTGCGGTCTGGCTCTTTTAACATGGGCACTTAAATGCTTAATTGCAAGCAAAGCATCTCCTGCCACTTaGCATAAGAAGAATTTGGAC +
Preference number: 4 (lower is better)
Translates to: QCGLALLTWALKCLIASKASPAT*HKKNLD
Trigger: GTCCAAATTCTTCTTATGCCAAGTGGCAGGAGATGC...TTTGCTTGCAATTAAGCATTTAAGTGCCCATGTTAAAAGAGCCAGACCGCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp CGTTTAGCAATTTGGGAAAACCAACGAGAGATGTCATTTGCATTGCTTTTGAGAGAACTCCTGTGGGGTTaGCGCATTCTTGAACATGAG +
Preference number: 4 (lower is better)
Translates to: RLAIWENQREMSFALLLRELLWG*RILEHE
Trigger: CTCATGTTCAAGAATGCGCCAACCCCACAGGAGTTC...TCTCAAAAGCAATGCAAATGACATCTCTCGTTGGTTTTCCCAAATTGCTAAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CCA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGGAACTCCTGTGGGGTTaGCGCATTCTTGAACATGAG +
Preference number: 4 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLELLWG*RILEHE
Trigger: CTCATGTTCAAGAATGCGCCAACCCCACAGGAGTTC...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GCTCATCCTAAAATGATACTATTGCTAAGTAATGTCTACCACTATCGACCTATTCCAGATGATGGTTGGTaGGAGGGAGCTGACCACATC +
Preference number: 4 (lower is better)
Translates to: AHPKMILLLSNVYHYRPIPDDGW*EGADHI
Trigger: GATGTGGTCAGCTCCCTCCCACCAACCATCATCTGG...AATAGGTCGATAGTGGTAGACATTACTTAGCAATAGTATCATTTTAGGATGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CCA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTATATTCTGCCTGGCCTaGATGGTAGGTGGCACATTC +
Preference number: 4 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGIFCLA*MVGGTF
Trigger: GAATGTGCCACCTACCATCCAGGCCAGGCAGAATAT...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CCAGTTTTAGGAAATAATATGGATTTGTTCATCCACTCCCAACACAGCTTGCTTATATTCTGCCTGGCCTaGATGGTAGGTGGCACATTC +
Preference number: 4 (lower is better)
Translates to: PVLGNNMDLFIHSQHSLLIFCLA*MVGGTF
Trigger: GAATGTGCCACCTACCATCCAGGCCAGGCAGAATAT...AAGCAAGCTGTGTTGGGAGTGGATGAACAAATCCATATTATTTCCTAAAACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CCA 90 bp GCTCATCCTAAAATGATACTATTGCTAAGTAATGTCTACCACTATCGACCTATTCCTTTGTCCAGCTCATaGTGGGCTCTGGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: AHPKMILLLSNVYHYRPIPLSSS*WALGSL
Trigger: AAGGCTTCCCAGAGCCCACCATGAGCTGGACAAAGG...AATAGGTCGATAGTGGTAGACATTACTTAGCAATAGTATCATTTTAGGATGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CCA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAAAATTCCATGGCAGTCTaGTTCTCTACATATGTGATT +
Preference number: 4 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCENSMAV*FSTYVI
Trigger: AATCACATATGTAGAGAACCAGACTGCCATGGAATT...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTAATTCCATGGCAGTCTaGTTCTCTACATATGTGATT +
Preference number: 4 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFNSMAV*FSTYVI
Trigger: AATCACATATGTAGAGAACCAGACTGCCATGGAATT...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTAGTCTCTTGCTTCTCTaGTCGAGTCCACGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGSLLLL*SSPRSL
Trigger: AAGGCTTCGTGGACTCGACCAGAGAAGCAAGAGACT...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316851.12
ENST00000615112.4
CDS-3UTR CCA 90 bp GAATTCTTCCTCTGCTACATCATATTTAGGTTTGAACCCAAAATGCAACAAGTATCAAGGTACATGGACTaGGAGTCCTGGCCGATGGTG +
Preference number: 4 (lower is better)
Translates to: EFFLCYIIFRFEPKMQQVSRYMD*ESWPMV
Trigger: CACCATCGGCCAGGACTCCCAGTCCATGTACCTTGA...TACTTGTTGCATTTTGGGTTCAAACCTAAATATGATGTAGCAGAGGAAGAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTCACCTCCAGATAGCTaGCAGAGGGGGTGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFISPPDS*QRGCCR
Trigger: TCTACAACACCCCCTCTGCCAGCTATCTGGAGGTGA...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGGCGGCTAATCAGAAAGTGGTCTAACCCCCAAAGAAACACAAAAATAACCAAAATCATTCTCAGAGTCTaGGGTCACCTCCAGATAGCT +
Preference number: 4 (lower is better)
Translates to: WRLIRKWSNPQRNTKITKIILRV*GHLQIA
Trigger: AGCTATCTGGAGGTGACCCCAGACTCTGAGAATGAT...TTTGGTTATTTTTGTGTTTCTTTGGGGGTTAGACCACTTTCTGATTAGCCGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCGAGTATGGCTCCACCTaGTCGATGGATGGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFIEYGST*SMDGEE
Trigger: CTCTTCACCATCCATCGACCAGGTGGAGCCATACTC...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAACAAGTAGCAGATATGCAGAAACTTCTCTGTAAATCTAGCATGATGGTTTTTTGGGCACCCCACCTGTaGCCTCTGGTTCATCAAACT +
Preference number: 4 (lower is better)
Translates to: QQVADMQKLLCKSSMMVFWAPHL*PLVHQT
Trigger: AGTTTGATGAACCAGAGGCCACAGGTGGGGTGCCCA...AAAAACCATCATGCTAGATTTACAGAGAAGTTTCTGCATATCTGCTACTTGTTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTATGGGCACCCCACCTGTaGCCTCTGGTTCATCAAACT +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLWAPHL*PLVHQT
Trigger: AGTTTGATGAACCAGAGGCCACAGGTGGGGTGCCCA...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAACGATGCCCTCCATGCTaGCTTCCTTGGCATCATACC +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKRCPPC*LPWHHT
Trigger: GGTATGATGCCAAGGAAGCCAGCATGGAGGGCATCG...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTTTCGAACCTCCACGATaGGCTCCTTGGACTCATCTT +
Preference number: 4 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGFEPPR*APWTHL
Trigger: AAGATGAGTCCAAGGAGCCCATCGTGGAGGTTCGAA...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTCCCTCCATCATaGTTTGGGGTCCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFICFPPS*FGVLSS
Trigger: GGAGGAGAGGACCCCAAACCATGATGGAGGGAAACA...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAATCTCCTTTGTCTGTGTaGCGTCATTGGGGACCGTCT +
Preference number: 4 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQSPLSV*RHWGPS
Trigger: AGACGGTCCCCAATGACGCCACACAGACAAAGGAGA...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACAGTGTGTCTGTGGTGTTaGAAATGCTCTGGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTVCLWC*KCSGEA
Trigger: AGCTTCACCAGAGCATTTCCAACACCACAGACACAC...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTGCGTGTGTGTGTCTGTaGTGTTGGAAATGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFACVCL*CWKCSG
Trigger: ACCAGAGCATTTCCAACACCACAGACACACACACGC...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTGTGCTAAAGCAAGCGTaGGATGATCCTACCTACCTC +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFVLKQA*DDPTYL
Trigger: GAGGTAGGTAGGATCATCCCACGCTTGCTTTAGCAC...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAAACAGATGCAGGCAGGTaGCGGCTAATCAGAAAGTGG +
Preference number: 4 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQTDAGR*RLIRKW
Trigger: CCACTTTCTGATTAGCCGCCACCTGCCTGCATCTGT...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTCACAAAGGGGATGTGTaGGGTAATAATGTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPHKGDV*GNNVCS
Trigger: TGAACACACATTATTACCCCACACATCCCCTTTGTG...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATCACAAAGGGGATGTGTaGGGTAATAATGTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: PGSHILLCALRSLFMFLYHKGDV*GNNVCS
Trigger: TGAACACACATTATTACCCCACACATCCCCTTTGTG...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTAGGGCTTGGCCTGGTGTaGCAAAGCCATCGACATTAC +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLGLGLV*QSHRHY
Trigger: GTAATGTCGATGGCTTTGCCACACCAGGCCAAGCCC...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAATCCTCCAGCAGAACTTaGCCATGCCGGTCTTCATGT +
Preference number: 4 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQSSSRT*PCRSSC
Trigger: ACATGAAGACCGGCATGGCCAAGTTCTGCTGGAGGA...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAATGGAAACAAAGGTaGTATCGATGTTTCACTTGG +
Preference number: 4 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSEWKQR*YRCFTW
Trigger: CCAAGTGAAACATCGATACCACCTTTGTTTCCATTC...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CGTTTAGCAATTTGGGAAAACCAACGAGAGATGTCATTTGCATTGCTTTTGAGATACCTCTTGCTTCTCTaGTCGAGTCCACGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: RLAIWENQREMSFALLLRYLLLL*SSPRSL
Trigger: AAGGCTTCGTGGACTCGACCAGAGAAGCAAGAGGTA...TCTCAAAAGCAATGCAAATGACATCTCTCGTTGGTTTTCCCAAATTGCTAAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CCA 90 bp TTCCTCTGCTACATCATATTTAGGTTTGAACCCAAAATGCAACAAGTAGCAGATGTCCCTTCAGAAAGATaGACACTGCCCCTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: FLCYIIFRFEPKMQQVADVPSER*TLPLSC
Trigger: ACAGGAGAGGGGCAGTGTCCATCTTTCTGAAGGGAC...ATCTGCTACTTGTTGCATTTTGGGTTCAAACCTAAATATGATGTAGCAGAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp ATATTTAGGTTTGAACCCAAAATGCAACAAGTAGCAGATATGCAGAAACTTCTCATCATTCCACACCACTaGGATCCGCTGCTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: IFRFEPKMQQVADMQKLLIIPHH*DPLLVW
Trigger: CCAAACCAGCAGCGGATCTCAGTGGTGTGGAATGAT...GAGAAGTTTCTGCATATCTGCTACTTGTTGCATTTTGGGTTCAAACCTAAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAACCTCATCTGTTTTCTTaGTGCCCCGGATCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKPHLFS*CPGSAG
Trigger: ACCTGCAGATCCGGGGCATCAAGAAAACAGATGAGG...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTACATTCACAATGACCTaGATGTCCTTGAAGTTGATC +
Preference number: 4 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPTFTMT*MSLKLI
Trigger: GATCAACTTCAAGGACATTCAGGTCATTGTGAATGT...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGGGGAACTATCGTCGCTaGAGATGTACTTCTCATCGT +
Preference number: 4 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLGNYRR*RCTSHR
Trigger: ACGATGAGAAGTACATCTTCAGCGACGATAGTTCCC...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp ACGTTTAGCAATTTGGGAAAACCAACGAGAGATGTCATTTGCATTGCTTTTGAGGGGAACTATCGTCGCTaGAGATGTACTTCTCATCGT +
Preference number: 4 (lower is better)
Translates to: TFSNLGKPTRDVICIAFEGNYRR*RCTSHR
Trigger: ACGATGAGAAGTACATCTTCAGCGACGATAGTTCCC...CTCAAAAGCAATGCAAATGACATCTCTCGTTGGTTTTCCCAAATTGCTAAACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR TCA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAAGAGGGGGTGTCTGCTTaGACAAGGATGAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQEGVSA*TRMNSK
Trigger: CTTGGAATTCATCCTTGTTCAAGCAGACACCCCCTC...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGGTCCTGAACACAAAATaGGCCGCCTTGGATTTTCCT +
Preference number: 4 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLVLNTK*AALDFP
Trigger: AGGAAAATCCAAGGCGGCTCATTTTGTGTTCAGGAC...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCTTGGAAATGCTCTGGTaGAGCTGCTGTGTCACTTTT +
Preference number: 4 (lower is better)
Translates to: VVSMFHLVKSFITREKAPLEMLW*SCCVTF
Trigger: AAAAGTGACACAGCAGCTTCACCAGAGCATTTCCAA...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTAACATAACCCCACATTaGGCAAATGACAAGACCATT +
Preference number: 4 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELNITPH*ANDKTI
Trigger: AATGGTCTTGTCATTTGCTCAATGTGGGGTTATGTT...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATATCGACATTACAAGATaGAGAACTGAGTCCACTGAA +
Preference number: 4 (lower is better)
Translates to: PGSHILLCALRSLFMFLYIDITR*RTESTE
Trigger: TTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGAT...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTATCGACATTACAAGATaGAGAACTGAGTCCACTGAA +
Preference number: 4 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELIDITR*RTESTE
Trigger: TTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGAT...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GAATTCTTCCTCTGCTACATCATATTTAGGTTTGAACCCAAAATGCAACAAGTATCTGATGTCTGCACGTaGGCCTCTAAACTGAGCGCT +
Preference number: 4 (lower is better)
Translates to: EFFLCYIIFRFEPKMQQVSDVCT*ASKLSA
Trigger: AGCGCTCAGTTTAGAGGCTCACGTGCAGACATCAGA...TACTTGTTGCATTTTGGGTTCAAACCTAAATATGATGTAGCAGAGGAAGAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp CTCTGCTACATCATATTTAGGTTTGAACCCAAAATGCAACAAGTAGCAGATATGTGCAGCATTGTAATCTaGTGGCTGGGAGGGATGTTC +
Preference number: 4 (lower is better)
Translates to: LCYIIFRFEPKMQQVADMCSIVI*WLGGMF
Trigger: GAACATCCCTCCCAGCCAGCAGATTACAATGCTGCA...CATATCTGCTACTTGTTGCATTTTGGGTTCAAACCTAAATATGATGTAGCAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATATGAGATCCTTAGTTTaGAGCATTGTAATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PGSHILLCALRSLFMFLYMRSLV*SIVICW
Trigger: CCAGCAGATTACAATGCTGCAAACTAAGGATCTCAT...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCCACCTGCAGAGAAACTaGAGTTCCCAGGAAAAACAA +
Preference number: 4 (lower is better)
Translates to: VVSMFHLVKSFITREKAPHLQRN*SSQEKQ
Trigger: TTGTTTTTCCTGGGAACTGCAGTTTCTCTGCAGGTG...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CAACAAGTAGCAGATATGCAGAAACTTCTCTGTAAATCTAGCATGATGGTTTTTACCACTGAGATCCGCTaGTGGTTTGGGGTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: QQVADMQKLLCKSSMMVFTTEIR*WFGVSF
Trigger: AAAGCTCACCCCAAACCAGCAGCGGATCTCAGTGGT...AAAAACCATCATGCTAGATTTACAGAGAAGTTTCTGCATATCTGCTACTTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp ACGTTTAGCAATTTGGGAAAACCAACGAGAGATGTCATTTGCATTGCTTTTGAGCCTTGTTCTCAGCAATaGAGATGTACTCAGCCTCGT +
Preference number: 4 (lower is better)
Translates to: TFSNLGKPTRDVICIAFEPCSQQ*RCTQPR
Trigger: ACGAGGCTGAGTACATCTGCATTGCTGAGAACAAGG...CTCAAAAGCAATGCAAATGACATCTCTCGTTGGTTTTCCCAAATTGCTAAACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR GCA 90 bp ACGTTTAGCAATTTGGGAAAACCAACGAGAGATGTCATTTGCATTGCTTTTGAGCAGGTAAGAGTGACCTaGTCCTCTAATTCCATGGCA +
Preference number: 4 (lower is better)
Translates to: TFSNLGKPTRDVICIAFEQVRVT*SSNSMA
Trigger: TGCCATGGAATTAGAGGAGCAGGTCACTCTTACCTG...CTCAAAAGCAATGCAAATGACATCTCTCGTTGGTTTTCCCAAATTGCTAAACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR GCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTCAGGTAAGAGTGACCTaGTCCTCTAATTCCATGGCA +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFQVRVT*SSNSMA
Trigger: TGCCATGGAATTAGAGGAGCAGGTCACTCTTACCTG...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAACATCAGTGTACTGGATaGTCTTCAGGGTCAGCGACG +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKHQCTG*SSGSAT
Trigger: CGTCGCTGACCCTGAAGAGCATCCAGTACACTGATG...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GAATTCTTCCTCTGCTACATCATATTTAGGTTTGAACCCAAAATGCAACAAGTAAGGACTCCTGCCCAATaGGGTTCACTGCAGTACAGT +
Preference number: 4 (lower is better)
Translates to: EFFLCYIIFRFEPKMQQVRTPAQ*GSLQYS
Trigger: ACTGTACTGCAGTGAACCGCATTGGGCAGGAGTCCT...TACTTGTTGCATTTTGGGTTCAAACCTAAATATGATGTAGCAGAGGAAGAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp ATATTTAGGTTTGAACCCAAAATGCAACAAGTAGCAGATATGCAGAAACTTCTCTCTGGTTCATCAAACTaGACCTGGGCTGTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: IFRFEPKMQQVADMQKLLSGSSN*TWAVLE
Trigger: CTCCAGCACAGCCCAGGTGCAGTTTGATGAACCAGA...GAGAAGTTTCTGCATATCTGCTACTTGTTGCATTTTGGGTTCAAACCTAAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp CAGTGCGGTCTGGCTCTTTTAACATGGGCACTTAAATGCTTAATTGCAAGCAAATACTTCTTCACCAACTaGTCTCCACTCAGCTTTGTA +
Preference number: 4 (lower is better)
Translates to: QCGLALLTWALKCLIASKYFFTN*SPLSFV
Trigger: TACAAAGCTGAGTGGAGAGCAGTTGGTGAAGAAGTA...TTTGCTTGCAATTAAGCATTTAAGTGCCCATGTTAAAAGAGCCAGACCGCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTTCATACCACTTGGAATaGCATACTTCTTCACCAACT +
Preference number: 4 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELSYHLE*HTSSPT
Trigger: AGTTGGTGAAGAAGTATGGCATTCCAAGTGGTATGA...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCGAGCCGCCGTCATCCTaGTTGATCAGGTTCACTTTA +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFIEPPSS*LIRFTL
Trigger: TAAAGTGAACCTGATCAAGCAGGATGACGGCGGCTC...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACATCTCTTCACCCATCATaGTTTGCTCTCGTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTSLHPS*FALVLL
Trigger: AAGGAGAACGAGAGCAAAGCATGATGGGTGAAGAGA...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATCACATTCTACTGTGTaGTCTAAGATCTCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLSHSTV*SKISLH
Trigger: ATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGA...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CTCTGCTACATCATATTTAGGTTTGAACCCAAAATGCAACAAGTAGCAGATATGTGTAGGATGCAGAATTaGCTCCCAAGGTTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LCYIIFRFEPKMQQVADMCRMQN*LPRLLG
Trigger: TCCCAGCAACCTTGGGAGGCAATTCTGCATCCTACA...CATATCTGCTACTTGTTGCATTTTGGGTTCAAACCTAAATATGATGTAGCAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp CGTTTAGCAATTTGGGAAAACCAACGAGAGATGTCATTTGCATTGCTTTTGAGATTCACCATTTCAAAATaGCTGGCCTGGGAATTGGGG +
Preference number: 4 (lower is better)
Translates to: RLAIWENQREMSFALLLRFTISK*LAWELG
Trigger: CCCCAATTCCCAGGCCAGGCATTTTGAAATGGTGAA...TCTCAAAAGCAATGCAAATGACATCTCTCGTTGGTTTTCCCAAATTGCTAAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR GCA 90 bp CAACAAGTAGCAGATATGCAGAAACTTCTCTGTAAATCTAGCATGATGGTTTTTGACCTGGGATCCTTATaGTCTGCCCTGTGCCCAAAA +
Preference number: 4 (lower is better)
Translates to: QQVADMQKLLCKSSMMVFDLGSL*SALCPK
Trigger: TTTTGGGCACAGGGCAGAGCATAAGGATCCCAGGTC...AAAAACCATCATGCTAGATTTACAGAGAAGTTTCTGCATATCTGCTACTTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CCA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGAGCATTGTAATCTGCTaGCTGGGAGGGATGTTCTTG +
Preference number: 4 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLSIVIC*LGGMFL
Trigger: CAAGAACATCCCTCCCAGCCAGCAGATTACAATGCT...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCGAACTCCTGTGGGGTTaGCGCATTCTTGAACATGAG +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFIELLWG*RILEHE
Trigger: CTCATGTTCAAGAATGCGCCAACCCCACAGGAGTTC...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCATGAGATCGTGGCACTaGGATAGGCAAATACCTCGC +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFIMRSWH*DRQIPR
Trigger: GCGAGGTATTTGCCTATCCCAGTGCCACGATCTCAT...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GAATTCTTCCTCTGCTACATCATATTTAGGTTTGAACCCAAAATGCAACAAGTAGAGTATGGCTCCACCTaGTCGATGGATGGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: EFFLCYIIFRFEPKMQQVEYGST*SMDGEE
Trigger: CTCTTCACCATCCATCGACCAGGTGGAGCCATACTC...TACTTGTTGCATTTTGGGTTCAAACCTAAATATGATGTAGCAGAGGAAGAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAATCATCAAACTGCACCTaGGCTGTGCTGGAGTATGGC +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKSSNCT*AVLEYG
Trigger: GCCATACTCCAGCACAGCCCAGGTGCAGTTTGATGA...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTACCACGATGGGCTCCTTaGACTCATCTTTCGAGAAGG +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLPRWAP*THLSRR
Trigger: CCTTCTCGAAAGATGAGTCCAAGGAGCCCATCGTGG...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTTCGAACCTCCACGATaGGCTCCTTGGACTCATCTT +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFIFEPPR*APWTHL
Trigger: AAGATGAGTCCAAGGAGCCCATCGTGGAGGTTCGAA...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTATGTTTCCCTCCATCATaGTTTGGGGTCCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLCFPPS*FGVLSS
Trigger: GGAGGAGAGGACCCCAAACCATGATGGAGGGAAACA...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTTTCGTTTCTGTCTCCTaGCACTCTGGCTTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFFVSVS*HSGFAS
Trigger: AGAAGCAAAGCCAGAGTGCCAGGAGACAGAAACGAA...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTATCTCCTTTGTCTGTGTaGCGTCATTGGGGACCGTCT +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLSPLSV*RHWGPS
Trigger: AGACGGTCCCCAATGACGCCACACAGACAAAGGAGA...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAATCTCCTTTGTCTGTGTaGCGTCATTGGGGACCGTCT +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKSPLSV*RHWGPS
Trigger: AGACGGTCCCCAATGACGCCACACAGACAAAGGAGA...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTAAAGGGTGAGAACGCCTaGGAGCAGATCCCTTTTCAC +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLKGENA*EQIPFH
Trigger: GTGAAAAGGGATCTGCTCCCAGGCGTTCTCACCCTT...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTAGAAGTGTCAGAACGTTaGGGAGAGTGGCCCACAGAA +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLEVSER*GEWPTE
Trigger: TTCTGTGGGCCACTCTCCCCAACGTTCTGACACTTC...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAGAAGTGTCAGAACGTTaGGGAGAGTGGCCCACAGAA +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKEVSER*GEWPTE
Trigger: TTCTGTGGGCCACTCTCCCCAACGTTCTGACACTTC...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTACAGGGCTGTGTGTTCTaGGATCCTCCATTTCCATCC +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLQGCVF*DPPFPS
Trigger: GGATGGAAATGGAGGATCCCAGAACACACAGCCCTG...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACACGAAGTACAGAATGCTaGGTAGGGATGTTAATGGAG +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTRSTEC*VGMLME
Trigger: CTCCATTAACATCCCTACCCAGCATTCTGTACTTCG...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAACACAGCTTGCTTGCTCATCCTAAAATGATACTATTGCTAAGTAATGTCTACCCATTTCAAAATGCCTaGCCTGGGAATTGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: QHSLLAHPKMILLLSNVYPFQNA*PGNWGQ
Trigger: TTGCCCCCAATTCCCAGGCCAGGCATTTTGAAATGG...GTAGACATTACTTAGCAATAGTATCATTTTAGGATGAGCAAGCAAGCTGTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAACTGAGGACAGCCCCTTaGTTAGCCAGGACACTAGAA +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKLRTAP*LARTLE
Trigger: TTCTAGTGTCCTGGCTAACCAAGGGGCTGTCCTCAG...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR CCA 90 bp CCGTCATCCTGCTTGATCAGGTTCACTTTAATAGAGTTTCCATCCTCTCCCATCAAACTCCTTATGAAGTaGCACAAAAGTATCTGTGAG +
Preference number: 4 (lower is better)
Translates to: PSSCLIRFTLIEFPSSPIKLLMK*HKSICE
Trigger: CTCACAGATACTTTTGTGCCACTTCATAAGGAGTTT...GATGGGAGAGGATGGAAACTCTATTAAAGTGAACCTGATCAAGCAGGATGACGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR TCA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTGGTTCTCTACATATGTaGTTTTGGGTTTTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFGSLHM*FWVLQR
Trigger: TCTTTGCAAAACCCAAAATCACATATGTAGAGAACC...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAAGTCCTGAACACAAAATaGGCCGCCTTGGATTTTCCT +
Preference number: 4 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQVLNTK*AALDFP
Trigger: AGGAAAATCCAAGGCGGCTCATTTTGTGTTCAGGAC...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCGTCCTGAACACAAAATaGGCCGCCTTGGATTTTCCT +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFIVLNTK*AALDFP
Trigger: AGGAAAATCCAAGGCGGCTCATTTTGTGTTCAGGAC...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTCTGAATACTGCAAATTaGGATCTACCCCCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFLNTAN*DLPPEA
Trigger: AGCTTCTGGGGGTAGATCTCAATTTGCAGTATTCAG...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAAAGATGGATTTTCACCTaGGTGGGACCCAGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQRWIFT*VGPRQK
Trigger: TTTTTGCCTGGGTCCCACTCAGGTGAAAATCCATCT...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CCAGTTTTAGGAAATAATATGGATTTGTTCATCCACTCCCAACACAGCTTGCTTAGATCACTAACTCTGTaGCTTTATGGTCCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: PVLGNNMDLFIHSQHSLLRSLTL*LYGPEP
Trigger: TGGCTCTGGACCATAAAGTCACAGAGTTAGTGATCT...AAGCAAGCTGTGTTGGGAGTGGATGAACAAATCCATATTATTTCCTAAAACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR TCA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGCAATATCTGGGGTCTTaGAGTTCCCTTCGTCCATTT +
Preference number: 4 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLQYLGS*SSLRPF
Trigger: AAATGGACGAAGGGAACTTCAAGACCCCAGATATTG...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR TCA 90 bp TTCCTCTGCTACATCATATTTAGGTTTGAACCCAAAATGCAACAAGTAGCAGATACCTGTCCTGTAGACTaGTGCTCAAAGCCATTCTGT +
Preference number: 4 (lower is better)
Translates to: FLCYIIFRFEPKMQQVADTCPVD*CSKPFC
Trigger: ACAGAATGGCTTTGAGCATCAGTCTACAGGACAGGT...ATCTGCTACTTGTTGCATTTTGGGTTCAAACCTAAATATGATGTAGCAGAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp ACGTTTAGCAATTTGGGAAAACCAACGAGAGATGTCATTTGCATTGCTTTTGAGCTAGGGGCAGACAATTaGCAGGCTGAGTATGATTAT +
Preference number: 4 (lower is better)
Translates to: TFSNLGKPTRDVICIAFELGADN*QAEYDY
Trigger: ATAATCATACTCAGCCTGGCAATTGTCTGCCCCTAG...CTCAAAAGCAATGCAAATGACATCTCTCGTTGGTTTTCCCAAATTGCTAAACGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR GCA 90 bp CTCTGCTACATCATATTTAGGTTTGAACCCAAAATGCAACAAGTAGCAGATATGGCATTCACAATATTCTaGCTGGCCTGGATGGTAGGT +
Preference number: 4 (lower is better)
Translates to: LCYIIFRFEPKMQQVADMAFTIF*LAWMVG
Trigger: ACCTACCATCCAGGCCAGGCAGAATATTGTGAATGC...CATATCTGCTACTTGTTGCATTTTGGGTTCAAACCTAAATATGATGTAGCAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTAGCTTTGGGGCATATTaGACTTCAAGGTACATGGAC +
Preference number: 4 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGSFGAY*TSRYMD
Trigger: GTCCATGTACCTTGAAGTGCAATATGCCCCAAAGCT...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAACCCAATGCGGTTCACTaGAGTACAGTTGTAGTTCCC +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKPNAVH*STVVVP
Trigger: GGGAACTACAACTGTACTGCAGTGAACCGCATTGGG...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CAACAAGTAGCAGATATGCAGAAACTTCTCTGTAAATCTAGCATGATGGTTTTTCCCAATGCGGTTCACTaGAGTACAGTTGTAGTTCCC +
Preference number: 4 (lower is better)
Translates to: QQVADMQKLLCKSSMMVFPNAVH*STVVVP
Trigger: GGGAACTACAACTGTACTGCAGTGAACCGCATTGGG...AAAAACCATCATGCTAGATTTACAGAGAAGTTTCTGCATATCTGCTACTTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTTCTCTTCACCCATCATaGTTTGCTCTCGTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGSLHPS*FALVLL
Trigger: AAGGAGAACGAGAGCAAAGCATGATGGGTGAAGAGA...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTACTGTGGTGTTGGAAATaGTCTGGTGAAGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLLWCWK*SGEAAV
Trigger: CACAGCAGCTTCACCAGAGCATTTCCAACACCACAG...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTCTGAAACTGGTCTGTaGCAATCGGGTAACACCAAG +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFISETGL*QSGNTK
Trigger: CTTGGTGTTACCCGATTGGCACAGACCAGTTTCAGA...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTCTACCCCCAGAAGCTaGAATTTGGCATTCGTCCTA +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFISTPRS*NLAFVL
Trigger: TAGGACGAATGCCAAATTGCAGCTTCTGGGGGTAGA...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAAAGCAGAACTTGGCCATaGCGGTCTTCATGTGAATAC +
Preference number: 4 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQSRTWP*RSSCEY
Trigger: GTATTCACATGAAGACCGGCATGGCCAAGTTCTGCT...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTTCCACCTCCAAAGCTaGACTATATACACCACAGCC +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFIFHLQS*TIYTTA
Trigger: GGCTGTGGTGTATATAGTGCAGCTTTGGAGGTGGAA...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCCCCCGAAGTACAGAATaGTGGGTAGGGATGTTAATG +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFIPRSTE*WVGMLM
Trigger: CATTAACATCCCTACCCAGCATTCTGTACTTCGGGG...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTAAGTATTCCGACAGAATaGAAAGTCAAAATTCTCAGT +
Preference number: 4 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLSIPTE*KVKILS
Trigger: ACTGAGAATTTTGACTTTGCATTCTGTCGGAATACT...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CAACAAGTAGCAGATATGCAGAAACTTCTCTGTAAATCTAGCATGATGGTTTTTCTACGCACCACCATGTaGCCATCCAGAGTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: QQVADMQKLLCKSSMMVFLRTTM*PSRVFS
Trigger: AGAAAAGACTCTGGATGGGCACATGGTGGTGCGTAG...AAAAACCATCATGCTAGATTTACAGAGAAGTTTCTGCATATCTGCTACTTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAATTGCCAGTTCCATGGTaGATGTACCTCTTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQLPVPW*MYLLLL
Trigger: GAGAAGCAAGAGGTACATGCACCATGGAACTGGCAA...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615285.4
CDS-3UTR CCA 90 bp ATATTTAGGTTTGAACCCAAAATGCAACAAGTAGCAGATATGCAGAAACTTCTCGAACTCCTGTGGGGTTaGCGCATTCTTGAACATGAG +
Preference number: 4 (lower is better)
Translates to: IFRFEPKMQQVADMQKLLELLWG*RILEHE
Trigger: CTCATGTTCAAGAATGCGCCAACCCCACAGGAGTTC...GAGAAGTTTCTGCATATCTGCTACTTGTTGCATTTTGGGTTCAAACCTAAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGTTTTTGATGGTCAGCTaGGAACTATCGTCGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLFLMVS*ELSSLK
Trigger: CTTCAGCGACGATAGTTCCCAGCTGACCATCAAAAA...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTTTTTTGATGGTCAGCTaGGAACTATCGTCGCTGAAG +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFFLMVS*ELSSLK
Trigger: CTTCAGCGACGATAGTTCCCAGCTGACCATCAAAAA...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
41% GC, longest homopolymer 9 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAATGAGATCGTGGCACTaGGATAGGCAAATACCTCGC +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKMRSWH*DRQIPR
Trigger: GCGAGGTATTTGCCTATCCCAGTGCCACGATCTCAT...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCATCATTCTCAGAGTCTaGGGTCACCTCCAGATAGCT +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFIIILRV*GHLQIA
Trigger: AGCTATCTGGAGGTGACCCCAGACTCTGAGAATGAT...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTTCGTTTCTGTCTCCTaGCACTCTGGCTTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFIFVSVS*HSGFAS
Trigger: AGAAGCAAAGCCAGAGTGCCAGGAGACAGAAACGAA...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAGCGTGTGTGTGTCTGTaGTGTTGGAAATGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKACVCL*CWKCSG
Trigger: ACCAGAGCATTTCCAACACCACAGACACACACACGC...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTCCAGAAGCTGCAATTTaGCATTCGTCCTATAAAATA +
Preference number: 4 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPPEAAI*HSSYKI
Trigger: TATTTTATAGGACGAATGCCAAATTGCAGCTTCTGG...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAGTGCTAAAGCAAGCGTaGGATGATCCTACCTACCTC +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKVLKQA*DDPTYL
Trigger: GAGGTAGGTAGGATCATCCCACGCTTGCTTTAGCAC...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACACACAAAGGGGATGTGTaGGGTAATAATGTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTHKGDV*GNNVCS
Trigger: TGAACACACATTATTACCCCACACATCCCCTTTGTG...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTACCTCAAGTGAAAACCTaGGACTCGGAAGGCTCCATA +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLPQVKT*DSEGSI
Trigger: TATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGG...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTCGAAGTACAGAATGCTaGGTAGGGATGTTAATGGAG +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFRSTEC*VGMLME
Trigger: CTCCATTAACATCCCTACCCAGCATTCTGTACTTCG...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CCAGTTTTAGGAAATAATATGGATTTGTTCATCCACTCCCAACACAGCTTGCTTGCCTGGCCTGGGAATTaGGGGCAATTTATTTCTATT +
Preference number: 4 (lower is better)
Translates to: PVLGNNMDLFIHSQHSLLAWPGN*GQFISI
Trigger: AATAGAAATAAATTGCCCCCAATTCCCAGGCCAGGC...AAGCAAGCTGTGTTGGGAGTGGATGAACAAATCCATATTATTTCCTAAAACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CCA 90 bp GAATTCTTCCTCTGCTACATCATATTTAGGTTTGAACCCAAAATGCAACAAGTACACTGTTACAAGCCGTaGGTCTGTCTAAATGGGACC +
Preference number: 4 (lower is better)
Translates to: EFFLCYIIFRFEPKMQQVHCYKP*VCLNGT
Trigger: GGTCCCATTTAGACAGACCCACGGCTTGTAACAGTG...TACTTGTTGCATTTTGGGTTCAAACCTAAATATGATGTAGCAGAGGAAGAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR TCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTAGTCCTGAACACAAAATaGGCCGCCTTGGATTTTCCT +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLVLNTK*AALDFP
Trigger: AGGAAAATCCAAGGCGGCTCATTTTGTGTTCAGGAC...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTAAAGACACTAATTCCCTaGAGCACACATGCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLKTLIP*STHALP
Trigger: CGGAAGAGCATGTGTGCTTCAGGGAATTAGTGTCTT...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACAATCGACATTACAAGATaGAGAACTGAGTCCACTGAA +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTIDITR*RTESTE
Trigger: TTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGAT...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGGAACCAAAACCAGTTTaGCCTAACCACAACCACTTT +
Preference number: 4 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLEPKPV*PNHNHF
Trigger: AAAGTGGTTGTGGTTAGGTCAAACTGGTTTTGGTTC...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAATGTTAATGGAGGTCTaGAAACCGCCATCCAGACAG +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKMLMEV*KPPSRQ
Trigger: CTGTCTGGATGGCGGTTTTCAGACCTCCATTAACAT...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTAATGTTAATGGAGGTCTaGAAACCGCCATCCAGACAG +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLMLMEV*KPPSRQ
Trigger: CTGTCTGGATGGCGGTTTTCAGACCTCCATTAACAT...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp ACGTTTAGCAATTTGGGAAAACCAACGAGAGATGTCATTTGCATTGCTTTTGAGGTAATTACCTGGATGTaGTTTTACCAGCACCAGCAA +
Preference number: 4 (lower is better)
Translates to: TFSNLGKPTRDVICIAFEVITWM*FYQHQQ
Trigger: TTGCTGGTGCTGGTAAAATCACATCCAGGTAATTAC...CTCAAAAGCAATGCAAATGACATCTCTCGTTGGTTTTCCCAAATTGCTAAACGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR GCA 90 bp CAACACAGCTTGCTTGCTCATCCTAAAATGATACTATTGCTAAGTAATGTCTACCACCTGCAGAGAAACTaGAGTTCCCAGGAAAAACAA +
Preference number: 4 (lower is better)
Translates to: QHSLLAHPKMILLLSNVYHLQRN*SSQEKQ
Trigger: TTGTTTTTCCTGGGAACTGCAGTTTCTCTGCAGGTG...GTAGACATTACTTAGCAATAGTATCATTTTAGGATGAGCAAGCAAGCTGTGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR GCA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAACACCTGCAGAGAAACTaGAGTTCCCAGGAAAAACAA +
Preference number: 4 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQHLQRN*SSQEKQ
Trigger: TTGTTTTTCCTGGGAACTGCAGTTTCTCTGCAGGTG...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ATATTTAGGTTTGAACCCAAAATGCAACAAGTAGCAGATATGCAGAAACTTCTCGCATTCACAATATTCTaGCTGGCCTGGATGGTAGGT +
Preference number: 4 (lower is better)
Translates to: IFRFEPKMQQVADMQKLLAFTIF*LAWMVG
Trigger: ACCTACCATCCAGGCCAGGCAGAATATTGTGAATGC...GAGAAGTTTCTGCATATCTGCTACTTGTTGCATTTTGGGTTCAAACCTAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCAGCTTTGGGGCATATTaGACTTCAAGGTACATGGAC +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFISFGAY*TSRYMD
Trigger: GTCCATGTACCTTGAAGTGCAATATGCCCCAAAGCT...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGTACTTCTTCACCAACTaGTCTCCACTCAGCTTTGTA +
Preference number: 4 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLYFFTN*SPLSFV
Trigger: TACAAAGCTGAGTGGAGAGCAGTTGGTGAAGAAGTA...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAATCACCCATCATGCTTTaGTCTCGTTCTCCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQSPIML*SRSPLS
Trigger: AGACAAAGGAGAACGAGAGCAAAGCATGATGGGTGA...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTAAGGGTGACACACTTTaGATACTGAACAAATACAAA +
Preference number: 4 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPKGDTL*ILNKYK
Trigger: TTTGTATTTGTTCAGTATGCAAAGTGTGTCACCCTT...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACAAAGAAGTCTGAATACTaGAAATTGAGATCTACCCCC +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTKKSEY*KLRSTP
Trigger: GGGGGTAGATCTCAATTTGCAGTATTCAGACTTCTT...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTAGTATTCCGACAGAATaGAAAGTCAAAATTCTCAGT +
Preference number: 4 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELSIPTE*KVKILS
Trigger: ACTGAGAATTTTGACTTTGCATTCTGTCGGAATACT...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GCTCATCCTAAAATGATACTATTGCTAAGTAATGTCTACCACTATCGACCTATTGTAAGCTATACCTCTTaGTTCTCTGGTCGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: AHPKMILLLSNVYHYRPIVSYTS*FSGRVH
Trigger: GTGGACTCGACCAGAGAAGCAAGAGGTATAGCTTAC...AATAGGTCGATAGTGGTAGACATTACTTAGCAATAGTATCATTTTAGGATGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CCA 90 bp GCTCATCCTAAAATGATACTATTGCTAAGTAATGTCTACCACTATCGACCTATTAGCATTGTAATCTGCTaGCTGGGAGGGATGTTCTTG +
Preference number: 4 (lower is better)
Translates to: AHPKMILLLSNVYHYRPISIVIC*LGGMFL
Trigger: CAAGAACATCCCTCCCAGCCAGCAGATTACAATGCT...AATAGGTCGATAGTGGTAGACATTACTTAGCAATAGTATCATTTTAGGATGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CCA 90 bp CAACACAGCTTGCTTGCTCATCCTAAAATGATACTATTGCTAAGTAATGTCTACGCATCTCCTGCCACTTaGCATAAGAAGAATTTGGAC +
Preference number: 4 (lower is better)
Translates to: QHSLLAHPKMILLLSNVYASPAT*HKKNLD
Trigger: GTCCAAATTCTTCTTATGCCAAGTGGCAGGAGATGC...GTAGACATTACTTAGCAATAGTATCATTTTAGGATGAGCAAGCAAGCTGTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CCA 90 bp CAACACAGCTTGCTTGCTCATCCTAAAATGATACTATTGCTAAGTAATGTCTACTTTTTGATGGTCAGCTaGGAACTATCGTCGCTGAAG +
Preference number: 4 (lower is better)
Translates to: QHSLLAHPKMILLLSNVYFLMVS*ELSSLK
Trigger: CTTCAGCGACGATAGTTCCCAGCTGACCATCAAAAA...GTAGACATTACTTAGCAATAGTATCATTTTAGGATGAGCAAGCAAGCTGTGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CCA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAAGAAACCATGAGATCGTaGCACTGGGATAGGCAAATA +
Preference number: 4 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQETMRS*HWDRQI
Trigger: TATTTGCCTATCCCAGTGCCACGATCTCATGGTTTC...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ATATTTAGGTTTGAACCCAAAATGCAACAAGTAGCAGATATGCAGAAACTTCTCATCATTCTCAGAGTCTaGGGTCACCTCCAGATAGCT +
Preference number: 4 (lower is better)
Translates to: IFRFEPKMQQVADMQKLLIILRV*GHLQIA
Trigger: AGCTATCTGGAGGTGACCCCAGACTCTGAGAATGAT...GAGAAGTTTCTGCATATCTGCTACTTGTTGCATTTTGGGTTCAAACCTAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTTGGCATCATACCACTTaGAATGCCATACTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFWHHTT*NAILLH
Trigger: GTGAAGAAGTATGGCATTCCAAGTGGTATGATGCCA...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAATTCGTTTCTGTCTCCTaGCACTCTGGCTTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKFVSVS*HSGFAS
Trigger: AGAAGCAAAGCCAGAGTGCCAGGAGACAGAAACGAA...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AATTTGGGAAAACCAACGAGAGATGTCATTTGCATTGCTTTTGAGATGAAACGTAACTCTGTGACTTTATaGTCCAGAGCCACATCAACC +
Preference number: 4 (lower is better)
Translates to: NLGKPTRDVICIAFEMKRNSVTL*SRATST
Trigger: GGTTGATGTGGCTCTGGACCATAAAGTCACAGAGTT...ACGTTTCATCTCAAAAGCAATGCAAATGACATCTCTCGTTGGTTTTCCCAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CCA 90 bp ATCCACTCCCAACACAGCTTGCTTGCTCATCCTAAAATGATACTATTGCTAAGTAAGGAAAGGGAGGAGTaGGTTTTTAGATCACTAACT +
Preference number: 4 (lower is better)
Translates to: IHSQHSLLAHPKMILLLSKEREE*VFRSLT
Trigger: AGTTAGTGATCTAAAAACCCACTCCTCCCTTTCCTT...ACTTAGCAATAGTATCATTTTAGGATGAGCAAGCAAGCTGTGTTGGGAGTGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CCA 90 bp ATATTTAGGTTTGAACCCAAAATGCAACAAGTAGCAGATATGCAGAAACTTCTCCCAAGTTGTATCTGGTaGAGACAATGGAACAGGGGT +
Preference number: 4 (lower is better)
Translates to: IFRFEPKMQQVADMQKLLPSCIW*RQWNRG
Trigger: ACCCCTGTTCCATTGTCTCCACCAGATACAACTTGG...GAGAAGTTTCTGCATATCTGCTACTTGTTGCATTTTGGGTTCAAACCTAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531817.5
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAACACTTGCCAGTTCCATaGTGCATGTACCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKHLPVP*CMYLLL
Trigger: AAGCAAGAGGTACATGCACCATGGAACTGGCAAGTG...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615285.4
CDS-3UTR TCA 90 bp CAACACAGCTTGCTTGCTCATCCTAAAATGATACTATTGCTAAGTAATGTCTACTTGAACATGAGCTTCTaGAAGATCTTCACGTTGACG +
Preference number: 4 (lower is better)
Translates to: QHSLLAHPKMILLLSNVYLNMSF*KIFTLT
Trigger: CGTCAACGTGAAGATCTTTCAGAAGCTCATGTTCAA...GTAGACATTACTTAGCAATAGTATCATTTTAGGATGAGCAAGCAAGCTGTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR TCA 90 bp CTCTGCTACATCATATTTAGGTTTGAACCCAAAATGCAACAAGTAGCAGATATGTTGAACATGAGCTTCTaGAAGATCTTCACGTTGACG +
Preference number: 4 (lower is better)
Translates to: LCYIIFRFEPKMQQVADMLNMSF*KIFTLT
Trigger: CGTCAACGTGAAGATCTTTCAGAAGCTCATGTTCAA...CATATCTGCTACTTGTTGCATTTTGGGTTCAAACCTAAATATGATGTAGCAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp CCAGTTTTAGGAAATAATATGGATTTGTTCATCCACTCCCAACACAGCTTGCTTACATTCACAATGACCTaGATGTCCTTGAAGTTGATC +
Preference number: 4 (lower is better)
Translates to: PVLGNNMDLFIHSQHSLLTFTMT*MSLKLI
Trigger: GATCAACTTCAAGGACATTCAGGTCATTGTGAATGT...AAGCAAGCTGTGTTGGGAGTGGATGAACAAATCCATATTATTTCCTAAAACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR TCA 90 bp AATTTGGGAAAACCAACGAGAGATGTCATTTGCATTGCTTTTGAGATGAAACGTTCTTATCCACCTTTTTaGTGGTCAGCTGGGAACTAT +
Preference number: 4 (lower is better)
Translates to: NLGKPTRDVICIAFEMKRSYPPF*WSAGNY
Trigger: ATAGTTCCCAGCTGACCATCAAAAAGGTGGATAAGA...ACGTTTCATCTCAAAAGCAATGCAAATGACATCTCTCGTTGGTTTTCCCAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR TCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCGGTTCTCTACATATGTaGTTTTGGGTTTTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: VVSMFHLVKSFITREKAPGSLHM*FWVLQR
Trigger: TCTTTGCAAAACCCAAAATCACATATGTAGAGAACC...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTAACATAACCCCACATTaGGCAAATGACAAGACCATT +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFNITPH*ANDKTI
Trigger: AATGGTCTTGTCATTTGCTCAATGTGGGGTTATGTT...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCGAACCAAAACCAGTTTaGCCTAACCACAACCACTTT +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFIEPKPV*PNHNHF
Trigger: AAAGTGGTTGTGGTTAGGTCAAACTGGTTTTGGTTC...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp TGGCGGCTAATCAGAAAGTGGTCTAACCCCCAAAGAAACACAAAAATAACCAAAAAAACTCTTGCATGCTaGGACAAACCTATGTGTAAT +
Preference number: 4 (lower is better)
Translates to: WRLIRKWSNPQRNTKITKKTLAC*DKPMCN
Trigger: ATTACACATAGGTTTGTCTCAGCATGCAAGAGTTTT...TTTGGTTATTTTTGTGTTTCTTTGGGGGTTAGACCACTTTCTGATTAGCCGCCA
39% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACAAAAACTCTTGCATGCTaGGACAAACCTATGTGTAAT +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTKTLAC*DKPMCN
Trigger: ATTACACATAGGTTTGTCTCAGCATGCAAGAGTTTT...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCAAAACTCTTGCATGCTaGGACAAACCTATGTGTAAT +
Preference number: 4 (lower is better)
Translates to: VVSMFHLVKSFITREKAPKTLAC*DKPMCN
Trigger: ATTACACATAGGTTTGTCTCAGCATGCAAGAGTTTT...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp CAACAAGTAGCAGATATGCAGAAACTTCTCTGTAAATCTAGCATGATGGTTTTTTGCAGAGAAAAGCAATaGGACAAAGGTGTAGGATGC +
Preference number: 4 (lower is better)
Translates to: QQVADMQKLLCKSSMMVFCREKQ*DKGVGC
Trigger: GCATCCTACACCTTTGTCTCATTGCTTTTCTCTGCA...AAAAACCATCATGCTAGATTTACAGAGAAGTTTCTGCATATCTGCTACTTGTTG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp ATATTTAGGTTTGAACCCAAAATGCAACAAGTAGCAGATATGCAGAAACTTCTCTGCAGAGAAAAGCAATaGGACAAAGGTGTAGGATGC +
Preference number: 4 (lower is better)
Translates to: IFRFEPKMQQVADMQKLLCREKQ*DKGVGC
Trigger: GCATCCTACACCTTTGTCTCATTGCTTTTCTCTGCA...GAGAAGTTTCTGCATATCTGCTACTTGTTGCATTTTGGGTTCAAACCTAAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAACTAGGGGCAGACAATTaGCAGGCTGAGTATGATTAT +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKLGADN*QAEYDY
Trigger: ATAATCATACTCAGCCTGGCAATTGTCTGCCCCTAG...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTATGAGATCCTTAGTTTaGAGCATTGTAATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGMRSLV*SIVICW
Trigger: CCAGCAGATTACAATGCTGCAAACTAAGGATCTCAT...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAACACCTGCAGAGAAACTaGAGTTCCCAGGAAAAACAA +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKHLQRN*SSQEKQ
Trigger: TTGTTTTTCCTGGGAACTGCAGTTTCTCTGCAGGTG...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ATCCACTCCCAACACAGCTTGCTTGCTCATCCTAAAATGATACTATTGCTAAGTTGTGATTTTGGGTTTTaGAAAGACTTTGAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: IHSQHSLLAHPKMILLLSCDFGF*KDFEVD
Trigger: ATCCACCTCAAAGTCTTTGCAAAACCCAAAATCACA...ACTTAGCAATAGTATCATTTTAGGATGAGCAAGCAAGCTGTGTTGGGAGTGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR GCA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGTCATACCACTTGGAATaGCATACTTCTTCACCAACT +
Preference number: 4 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLSYHLE*HTSSPT
Trigger: AGTTGGTGAAGAAGTATGGCATTCCAAGTGGTATGA...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAATCACCCATCATGCTTTaGTCTCGTTCTCCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKSPIML*SRSPLS
Trigger: AGACAAAGGAGAACGAGAGCAAAGCATGATGGGTGA...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTATGCAAGGTCAATATCTaGGGTCTTGAAGTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLCKVNI*GLEVPF
Trigger: GAAGGGAACTTCAAGACCCCAGATATTGACCTTGCA...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR TCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTATCTTATCCACCTTTTTaGTGGTCAGCTGGGAACTAT +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLSYPPF*WSAGNY
Trigger: ATAGTTCCCAGCTGACCATCAAAAAGGTGGATAAGA...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAATCTTATCCACCTTTTTaGTGGTCAGCTGGGAACTAT +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKSYPPF*WSAGNY
Trigger: ATAGTTCCCAGCTGACCATCAAAAAGGTGGATAAGA...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CAACACAGCTTGCTTGCTCATCCTAAAATGATACTATTGCTAAGTAATGTCTACATGAGATCCTTAGTTTaGAGCATTGTAATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QHSLLAHPKMILLLSNVYMRSLV*SIVICW
Trigger: CCAGCAGATTACAATGCTGCAAACTAAGGATCTCAT...GTAGACATTACTTAGCAATAGTATCATTTTAGGATGAGCAAGCAAGCTGTGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR GCA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAAATGAGATCCTTAGTTTaGAGCATTGTAATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQMRSLV*SIVICW
Trigger: CCAGCAGATTACAATGCTGCAAACTAAGGATCTCAT...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTTGTGATTTTGGGTTTTaGAAAGACTTTGAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFCDFGF*KDFEVD
Trigger: ATCCACCTCAAAGTCTTTGCAAAACCCAAAATCACA...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAAAAGAAGTCTGAATACTaGAAATTGAGATCTACCCCC +
Preference number: 4 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQKKSEY*KLRSTP
Trigger: GGGGGTAGATCTCAATTTGCAGTATTCAGACTTCTT...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACAAGTATTCCGACAGAATaGAAAGTCAAAATTCTCAGT +
Preference number: 4 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTSIPTE*KVKILS
Trigger: ACTGAGAATTTTGACTTTGCATTCTGTCGGAATACT...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CCAGTTTTAGGAAATAATATGGATTTGTTCATCCACTCCCAACACAGCTTGCTTAATTCCATGGCAGTCTaGTTCTCTACATATGTGATT +
Preference number: 4 (lower is better)
Translates to: PVLGNNMDLFIHSQHSLLNSMAV*FSTYVI
Trigger: AATCACATATGTAGAGAACCAGACTGCCATGGAATT...AAGCAAGCTGTGTTGGGAGTGGATGAACAAATCCATATTATTTCCTAAAACTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CCA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGAATTCCATGGCAGTCTaGTTCTCTACATATGTGATT +
Preference number: 4 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLNSMAV*FSTYVI
Trigger: AATCACATATGTAGAGAACCAGACTGCCATGGAATT...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTAATTCCATGGCAGTCTaGTTCTCTACATATGTGATT +
Preference number: 4 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGNSMAV*FSTYVI
Trigger: AATCACATATGTAGAGAACCAGACTGCCATGGAATT...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp ATATTTAGGTTTGAACCCAAAATGCAACAAGTAGCAGATATGCAGAAACTTCTCTGGCATCATACCACTTaGAATGCCATACTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: IFRFEPKMQQVADMQKLLWHHTT*NAILLH
Trigger: GTGAAGAAGTATGGCATTCCAAGTGGTATGATGCCA...GAGAAGTTTCTGCATATCTGCTACTTGTTGCATTTTGGGTTCAAACCTAAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CCA 90 bp ACGTTTAGCAATTTGGGAAAACCAACGAGAGATGTCATTTGCATTGCTTTTGAGATACGTTTAGCAATTTaGGAAAACCAACGAGAGATG +
Preference number: 4 (lower is better)
Translates to: TFSNLGKPTRDVICIAFEIRLAI*ENQREM
Trigger: CATCTCTCGTTGGTTTTCCCAAATTGCTAAACGTAT...CTCAAAAGCAATGCAAATGACATCTCTCGTTGGTTTTCCCAAATTGCTAAACGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529356.5
3UTR CAA 72 bp CAACACAGCTTGCTTGCTCATCCTAAAATGATACTATaGCTAAGTAATGTCTACCACTATCGACCTATTCTT +
Preference number: 4 (lower is better)
Translates to: QHSLLAHPKMIL*LSNVYHYRPIL
Trigger: AAGAATAGGTCGATAGTGGTAGACATTACTTAGCAATAGTATCATTTTAGGATGAGCAAGCAAGCTGTGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR TCA 90 bp ATATTTAGGTTTGAACCCAAAATGCAACAAGTAGCAGATATGCAGAAACTTCTCACATTCACAATGACCTaGATGTCCTTGAAGTTGATC +
Preference number: 4 (lower is better)
Translates to: IFRFEPKMQQVADMQKLLTFTMT*MSLKLI
Trigger: GATCAACTTCAAGGACATTCAGGTCATTGTGAATGT...GAGAAGTTTCTGCATATCTGCTACTTGTTGCATTTTGGGTTCAAACCTAAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR TCA 90 bp ATATTTAGGTTTGAACCCAAAATGCAACAAGTAGCAGATATGCAGAAACTTCTCTTCATTAGAGCATTATaGAGACCAGCTTGGAACATG +
Preference number: 4 (lower is better)
Translates to: IFRFEPKMQQVADMQKLLFIRAL*RPAWNM
Trigger: CATGTTCCAAGCTGGTCTTCATAATGCTCTAATGAA...GAGAAGTTTCTGCATATCTGCTACTTGTTGCATTTTGGGTTCAAACCTAAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR TCA 90 bp GAATTCTTCCTCTGCTACATCATATTTAGGTTTGAACCCAAAATGCAACAAGTAATGAGATATGTAGAATaGTATGTGACCACAATGGGG +
Preference number: 4 (lower is better)
Translates to: EFFLCYIIFRFEPKMQQVMRYVE*YVTTMG
Trigger: CCCCATTGTGGTCACATATCATTCTACATATCTCAT...TACTTGTTGCATTTTGGGTTCAAACCTAAATATGATGTAGCAGAGGAAGAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR GCA 90 bp ATATTTAGGTTTGAACCCAAAATGCAACAAGTAGCAGATATGCAGAAACTTCTCATGAGATCCTTAGTTTaGAGCATTGTAATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: IFRFEPKMQQVADMQKLLMRSLV*SIVICW
Trigger: CCAGCAGATTACAATGCTGCAAACTAAGGATCTCAT...GAGAAGTTTCTGCATATCTGCTACTTGTTGCATTTTGGGTTCAAACCTAAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAATGTGATTTTGGGTTTTaGAAAGACTTTGAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQCDFGF*KDFEVD
Trigger: ATCCACCTCAAAGTCTTTGCAAAACCCAAAATCACA...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTGATTTTGGGTTTTaGAAAGACTTTGAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFICDFGF*KDFEVD
Trigger: ATCCACCTCAAAGTCTTTGCAAAACCCAAAATCACA...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ATATTTAGGTTTGAACCCAAAATGCAACAAGTAGCAGATATGCAGAAACTTCTCTCATACCACTTGGAATaGCATACTTCTTCACCAACT +
Preference number: 4 (lower is better)
Translates to: IFRFEPKMQQVADMQKLLSYHLE*HTSSPT
Trigger: AGTTGGTGAAGAAGTATGGCATTCCAAGTGGTATGA...GAGAAGTTTCTGCATATCTGCTACTTGTTGCATTTTGGGTTCAAACCTAAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTAAAGAAGTCTGAATACTaGAAATTGAGATCTACCCCC +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLKKSEY*KLRSTP
Trigger: GGGGGTAGATCTCAATTTGCAGTATTCAGACTTCTT...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTCACATTCTACTGTGTaGTCTAAGATCTCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFISHSTV*SKISLH
Trigger: ATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGA...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAATGCAAAAACATCCTTTaGAAGGTCAATATCTGGGGT +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKCKNIL*KVNIWG
Trigger: ACCCCAGATATTGACCTTGCAAAGGATGTTTTTGCA...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR CCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCCCAGAAGCTGCAATTTaGCATTCGTCCTATAAAATA +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFIPEAAI*HSSYKI
Trigger: TATTTTATAGGACGAATGCCAAATTGCAGCTTCTGG...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTCACCTTGTAAACACTaGAAAACAAAGTTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFISPCKH*KTKLAE
Trigger: TTCTGCCAACTTTGTTTTCCAGTGTTTACAAGGTGA...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR TCA 90 bp GCTCATCCTAAAATGATACTATTGCTAAGTAATGTCTACCACTATCGACCTATTGGTTCTCTACATATGTaGTTTTGGGTTTTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: AHPKMILLLSNVYHYRPIGSLHM*FWVLQR
Trigger: TCTTTGCAAAACCCAAAATCACATATGTAGAGAACC...AATAGGTCGATAGTGGTAGACATTACTTAGCAATAGTATCATTTTAGGATGAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR GCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAATGTGATTTTGGGTTTTaGAAAGACTTTGAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKCDFGF*KDFEVD
Trigger: ATCCACCTCAAAGTCTTTGCAAAACCCAAAATCACA...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CAACAAGTAGCAGATATGCAGAAACTTCTCTGTAAATCTAGCATGATGGTTTTTTGTGATTTTGGGTTTTaGAAAGACTTTGAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: QQVADMQKLLCKSSMMVFCDFGF*KDFEVD
Trigger: ATCCACCTCAAAGTCTTTGCAAAACCCAAAATCACA...AAAAACCATCATGCTAGATTTACAGAGAAGTTTCTGCATATCTGCTACTTGTTG
36% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp GAATTCTTCCTCTGCTACATCATATTTAGGTTTGAACCCAAAATGCAACAAGTATGTGATTTTGGGTTTTaGAAAGACTTTGAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: EFFLCYIIFRFEPKMQQVCDFGF*KDFEVD
Trigger: ATCCACCTCAAAGTCTTTGCAAAACCCAAAATCACA...TACTTGTTGCATTTTGGGTTCAAACCTAAATATGATGTAGCAGAGGAAGAATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR GCA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCAAGGGTGACACACTTTaGATACTGAACAAATACAAA +
Preference number: 4 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFIKGDTL*ILNKYK
Trigger: TTTGTATTTGTTCAGTATGCAAAGTGTGTCACCCTT...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAATCACATTCTACTGTGTaGTCTAAGATCTCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKSHSTV*SKISLH
Trigger: ATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGA...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR GCA 90 bp CAACACAGCTTGCTTGCTCATCCTAAAATGATACTATTGCTAAGTAATGTCTACGTCTGGTTATTAAACTaGAATGGTGAGTTAAACTGT +
Preference number: 4 (lower is better)
Translates to: QHSLLAHPKMILLLSNVYVWLLN*NGELNC
Trigger: ACAGTTTAACTCACCATTGCAGTTTAATAACCAGAC...GTAGACATTACTTAGCAATAGTATCATTTTAGGATGAGCAAGCAAGCTGTGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CCA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAATCACCTTGTAAACACTaGAAAACAAAGTTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKSPCKH*KTKLAE
Trigger: TTCTGCCAACTTTGTTTTCCAGTGTTTACAAGGTGA...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTATCACCTTGTAAACACTaGAAAACAAAGTTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLSPCKH*KTKLAE
Trigger: TTCTGCCAACTTTGTTTTCCAGTGTTTACAAGGTGA...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
3UTR CAA 72 bp AATAATATGGATTTGTTCATCCACTCCCAACACAGCTaGCTTGCTCATCCTAAAATGATACTATTGCTAAGT +
Preference number: 4 (lower is better)
Translates to: NNMDLFIHSQHS*LAHPKMILLLS
Trigger: ACTTAGCAATAGTATCATTTTAGGATGAGCAAGCAAGCTGTGTTGGGAGTGGATGAACAAATCCATATTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR GCA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTAAAGGGTGACACACTTTaGATACTGAACAAATACAAA +
Preference number: 4 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLKGDTL*ILNKYK
Trigger: TTTGTATTTGTTCAGTATGCAAAGTGTGTCACCCTT...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS CCA 90 bp GGGCTGTGGCTGCCTCGGCCGGGCTCTTCGCGGCTCCGGGCTGGGTaGGCTCCGGGTCCGGGCCTTTGGTGCTGGGAGCCTCCTGCTTGG +
Preference number: 5 (lower is better)
Translates to: GLWLPRPGSSRLRAG*APGPGLWCWEPPAW
Trigger: CCAAGCAGGAGGCTCCCAGCACCAAAGGCCCGGACCCGGAGCCCACCCAGCCCGGAGCCGCGAAGAGCCCGGCCGAGGCAGCCACAGCCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS CCA 90 bp GCAAGGGCTGTGGCTGCCTCGGCCGGGCTCTTCGCGGCTCCGGGCTaGGTGGGCTCCGGGTCCGGGCCTTTGGTGCTGGGAGCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: ARAVAASAGLFAAPG*VGSGSGPLVLGASC
Trigger: GCAGGAGGCTCCCAGCACCAAAGGCCCGGACCCGGAGCCCACCCAGCCCGGAGCCGCGAAGAGCCCGGCCGAGGCAGCCACAGCCCTTGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS GCA 90 bp GCTGACGGAGGCAGCCTCGCTCTTCGGGCTAGCAAGGGCTGTGGCTaGCTCGGCCGGGCTCTTCGCGGCTCCGGGCTGGGTGGGCTCCGG +
Preference number: 5 (lower is better)
Translates to: ADGGSLALRASKGCG*LGRALRGSGLGGLR
Trigger: CCGGAGCCCACCCAGCCCGGAGCCGCGAAGAGCCCGGCCGAGGCAGCCACAGCCCTTGCTAGCCCGAAGAGCGAGGCTGCCTCCGTCAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS GCA 90 bp TCTTCGCGGCTCCGGGCTGGGTGGGCTCCGGGTCCGGGCCTTTGGTaGTGGGAGCCTCCTGCTTGGCCTGAGGGGCTTCTGTGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: SSRLRAGWAPGPGLW*WEPPAWPEGLLWQG
Trigger: CCCCTGCCACAGAAGCCCCTCAGGCCAAGCAGGAGGCTCCCAGCACCAAAGGCCCGGACCCGGAGCCCACCCAGCCCGGAGCCGCGAAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS CCA 90 bp GGCTCTTCGCGGCTCCGGGCTGGGTGGGCTCCGGGTCCGGGCCTTTaGTGCTGGGAGCCTCCTGCTTGGCCTGAGGGGCTTCTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: GSSRLRAGWAPGPGL*CWEPPAWPEGLLWQ
Trigger: CTGCCACAGAAGCCCCTCAGGCCAAGCAGGAGGCTCCCAGCACCAAAGGCCCGGACCCGGAGCCCACCCAGCCCGGAGCCGCGAAGAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS CCA 90 bp GGGTGGCCTGGCCAGCCGGTACAGAGTTTGAGTCAGGCGTGGCCGTaGCCGGCGGGGCAATACTGGAGGTCAGGGTGGTGGTCTCACTGG +
Preference number: 5 (lower is better)
Translates to: GWPGQPVQSLSQAWP*PAGQYWRSGWWSHW
Trigger: CCAGTGAGACCACCACCCTGACCTCCAGTATTGCCCCGCCGGCCACGGCCACGCCTGACTCAAACTCTGTACCGGCTGGCCAGGCCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS CCA 90 bp TGGAAGGGGTGGCCTGGCCAGCCGGTACAGAGTTTGAGTCAGGCGTaGCCGTGGCCGGCGGGGCAATACTGGAGGTCAGGGTGGTGGTCT +
Preference number: 5 (lower is better)
Translates to: WKGWPGQPVQSLSQA*PWPAGQYWRSGWWS
Trigger: AGACCACCACCCTGACCTCCAGTATTGCCCCGCCGGCCACGGCCACGCCTGACTCAAACTCTGTACCGGCTGGCCAGGCCACCCCTTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS CCA 90 bp CAGGCGTGGCCGTGGCCGGCGGGGCAATACTGGAGGTCAGGGTGGTaGTCTCACTGGTGGGGCTGTTCTGAGCAGTGGCAAAGGTTTCGG +
Preference number: 5 (lower is better)
Translates to: QAWPWPAGQYWRSGW*SHWWGCSEQWQRFR
Trigger: CCGAAACCTTTGCCACTGCTCAGAACAGCCCCACCAGTGAGACCACCACCCTGACCTCCAGTATTGCCCCGCCGGCCACGGCCACGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR CAA 90 bp GGGGCCAGGGCTGTGTGTTCTGGGATCCTCCATTTCCATCCCCAGGAGCTGAGAGGGACTGGCTGCGTCTaGAACTCGGAGGCCGCGCTG +
Preference number: 5 (lower is better)
Translates to: GARAVCSGILHFHPQELRGTGCV*NSEAAL
Trigger: CAGCGCGGCCTCCGAGTTCAAGACGCAGCCAGTCCC...TCTCAGCTCCTGGGGATGGAAATGGAGGATCCCAGAACACACAGCCCTGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS TCA 90 bp GAAGATGACGATGAGGATGCCCACGATGGCCCCGGTGCTCAGGCCTaGGGTGGGGCTGCCGTTGGCTTGAGTGGGAGAGAGATGGCTGGT +
Preference number: 5 (lower is better)
Translates to: EDDDEDAHDGPGAQA*GGAAVGLSGREMAG
Trigger: ACCAGCCATCTCTCTCCCACTCAAGCCAACGGCAGCCCCACCTCAGGCCTGAGCACCGGGGCCATCGTGGGCATCCTCATCGTCATCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533226.2
CDS CCA 90 bp GTGGGCTCTGGGAAGCCTTCGGCATCGCACACCAGGGTGACGGACTaGCCGAGGTTGGCGGTGGCATTCACAATATTCTGCCTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: VGSGKPSASHTRVTD*PRLAVAFTIFCLAW
Trigger: CCAGGCCAGGCAGAATATTGTGAATGCCACCGCCAACCTCGGCCAGTCCGTCACCCTGGTGTGCGATGCCGAAGGCTTCCCAGAGCCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000529356.5
ENST00000531044.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CCA 90 bp GGGACCGTCTTGACTTCGGCTGGCGCTGGCTTCGTTTCTGTCTCCTaGCACTCTGGCTTTGCTTCTACGGGGCCCTTCTCGGGCTCCGTC +
Preference number: 5 (lower is better)
Translates to: GTVLTSAGAGFVSVS*HSGFASTGPFSGSV
Trigger: GACGGAGCCCGAGAAGGGCCCCGTAGAAGCAAAGCCAGAGTGCCAGGAGACAGAAACGAAGCCAGCGCCAGCCGAAGTCAAGACGGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316851.12
ENST00000528590.5
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
CDS CCA 90 bp AGTCAGGCGTGGCCGTGGCCGGCGGGGCAATACTGGAGGTCAGGGTaGTGGTCTCACTGGTGGGGCTGTTCTGAGCAGTGGCAAAGGTTT +
Preference number: 5 (lower is better)
Translates to: SQAWPWPAGQYWRSG*WSHWWGCSEQWQRF
Trigger: AAACCTTTGCCACTGCTCAGAACAGCCCCACCAGTGAGACCACCACCCTGACCTCCAGTATTGCCCCGCCGGCCACGGCCACGCCTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS CCA 90 bp GTACAGAGTTTGAGTCAGGCGTGGCCGTGGCCGGCGGGGCAATACTaGAGGTCAGGGTGGTGGTCTCACTGGTGGGGCTGTTCTGAGCAG +
Preference number: 5 (lower is better)
Translates to: VQSLSQAWPWPAGQY*RSGWWSHWWGCSEQ
Trigger: CTGCTCAGAACAGCCCCACCAGTGAGACCACCACCCTGACCTCCAGTATTGCCCCGCCGGCCACGGCCACGCCTGACTCAAACTCTGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR CAA 90 bp GCCCCACTCTGTGCTGATCTGCGACATGCTGCCAGGCAGCAGGGGAGTCACCCCTGCACTGGGTTCCCCTaGGACTGGCTGCGTCTTGAA +
Preference number: 5 (lower is better)
Translates to: APLCADLRHAARQQGSHPCTGFP*DWLRLE
Trigger: TTCAAGACGCAGCCAGTCCAAGGGGAACCCAGTGCA...GGGGTGACTCCCCTGCTGCCTGGCAGCATGTCGCAGATCAGCACAGAGTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000621128.4
CDS-3UTR CAA 90 bp GGGGCCAGGGCTGTGTGTTCTGGGATCCTCCATTTCCATCCCCAGGAGCTGAGATCCATGTCCTTGCCCTaGGCCCCGGGCCCGGCTTTT +
Preference number: 5 (lower is better)
Translates to: GARAVCSGILHFHPQELRSMSLP*APGPAF
Trigger: AAAAGCCGGGCCCGGGGCCAAGGGCAAGGACATGGA...TCTCAGCTCCTGGGGATGGAAATGGAGGATCCCAGAACACACAGCCCTGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS TCA 90 bp TCCTGCCAGCGGCAGCCGAGCTGCGTTCACGCGCTGATCGGAGAATaGGTGACAGTCCCAGCCTCAGCACACTCGCAACTCGGAGATCCT +
Preference number: 5 (lower is better)
Translates to: SCQRQPSCVHALIGE*VTVPASAHSQLGDP
Trigger: AGGATCTCCGAGTTGCGAGTGTGCTGAGGCTGGGACTGTCACTCATTCTCCGATCAGCGCGTGAACGCAGCTCGGCTGCCGCTGGCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000401611.6
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
CDS GCA 90 bp AGCTTAGGTGCACTGGGTTCCCGTGGAGGAGGGCTATGGACTGGCTaGGTCTTGAACTCGGAGGCCGCGCTGATCTCACCCAGCCCTTTG +
Preference number: 5 (lower is better)
Translates to: SLGALGSRGGGLWTG*VLNSEAALISPSPL
Trigger: CAAAGGGCTGGGTGAGATCAGCGCGGCCTCCGAGTTCAAGACGCAGCCAGTCCATAGCCCTCCTCCACGGGAACCCAGTGCACCTAAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530543.5
CDS CCA 90 bp CTTGACTTCGGCTGGCGCTGGCTTCGTTTCTGTCTCCTGGCACTCTaGCTTTGCTTCTACGGGGCCCTTCTCGGGCTCCGTCAGTGGCGT +
Preference number: 5 (lower is better)
Translates to: LDFGWRWLRFCLLAL*LCFYGALLGLRQWR
Trigger: ACGCCACTGACGGAGCCCGAGAAGGGCCCCGTAGAAGCAAAGCCAGAGTGCCAGGAGACAGAAACGAAGCCAGCGCCAGCCGAAGTCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316851.12
ENST00000528590.5
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
CDS CCA 90 bp GGGACCGTCTTGACTTCGGCTGGCGCTGGCTTCGTTTCTGTCTCCTaGCACTCTGGCTTTGCTTCTACGGGGCCCTTCTGGTGGGGCTGT +
Preference number: 5 (lower is better)
Translates to: GTVLTSAGAGFVSVS*HSGFASTGPFWWGC
Trigger: ACAGCCCCACCAGAAGGGCCCCGTAGAAGCAAAGCCAGAGTGCCAGGAGACAGAAACGAAGCCAGCGCCAGCCGAAGTCAAGACGGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611284.4
CDS CCA 90 bp GACAGTCCCAGCCTCAGCACACTCGCAACTCGGAGATCCTTGCGCTaGCCCGGGTTCGTTTTGATGGAACTGGGATGGGAGCGAGGAGCG +
Preference number: 5 (lower is better)
Translates to: DSPSLSTLATRRSLR*PGFVLMELGWERGA
Trigger: CGCTCCTCGCTCCCATCCCAGTTCCATCAAAACGAACCCGGGCCAGCGCAAGGATCTCCGAGTTGCGAGTGTGCTGAGGCTGGGACTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621518.4
CDS-3UTR CAA 90 bp TCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCCCAGCCCTTTGCCATaGAGCGCCGCCAGCCTTACG +
Preference number: 5 (lower is better)
Translates to: SAAVAMVVLPGSSKGGTDPSPLP*SAASLT
Trigger: CGTAAGGCTGGCGGCGCTCAATGGCAAAGGGCTGGG...ATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTCCCTCCTCCATGTCCTaGCCCTTGGCCCCGGGCCCG +
Preference number: 5 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAPSSMS*PLAPGP
Trigger: CGGGCCCGGGGCCAAGGGCAAGGACATGGAGGAGGG...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS TCA 90 bp AGCTCATGGTGGGCTCTGGGAAGCCTTCGGCATCGCACACCAGGGTaGCGGACTGGCCGAGGTTGGCGGTGGCATTCACAATATTCTGCC +
Preference number: 5 (lower is better)
Translates to: SSWWALGSLRHRTPG*RTGRGWRWHSQYSA
Trigger: GGCAGAATATTGTGAATGCCACCGCCAACCTCGGCCAGTCCGTCACCCTGGTGTGCGATGCCGAAGGCTTCCCAGAGCCCACCATGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000529356.5
ENST00000531044.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS GCA 90 bp GCACCCCACCTGTGGCCTCTGGTTCATCAAACTGCACCTGGGCTGTaGTGGAGTATGGCTCCACCTGGTCGATGGATGGTGAAGAGGGGG +
Preference number: 5 (lower is better)
Translates to: APHLWPLVHQTAPGL*WSMAPPGRWMVKRG
Trigger: CCCCCTCTTCACCATCCATCGACCAGGTGGAGCCATACTCCAGCACAGCCCAGGTGCAGTTTGATGAACCAGAGGCCACAGGTGGGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000526322.5
ENST00000528590.5
ENST00000530543.5
ENST00000531044.5
ENST00000531817.5
ENST00000533073.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CCA 90 bp CTTCTACGGGGCCCTTCTCGGGCTCCGTCAGTGGCGTGGTCTCGTTaGGCTCTGTGTGTTTCCCTCCATCATGGTTTGGGGTCCTCTCCT +
Preference number: 5 (lower is better)
Translates to: LLRGPSRAPSVAWSR*ALCVSLHHGLGSSP
Trigger: AGGAGAGGACCCCAAACCATGATGGAGGGAAACACACAGAGCCCAACGAGACCACGCCACTGACGGAGCCCGAGAAGGGCCCCGTAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000316851.12
ENST00000528590.5
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
CDS-3UTR CAA 90 bp AATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGCCCAGCCCTTTGCCATaGAGCGCCGCCAGCCTTACG +
Preference number: 5 (lower is better)
Translates to: NGCSAAVAMVVLPGSSKGPSPLP*SAASLT
Trigger: CGTAAGGCTGGCGGCGCTCAATGGCAAAGGGCTGGG...CCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp CTCTCCCATCTGCCCTTCGAGCTTAGGTGCACTGGGTTCCCCTTCTGCTTTCTGCCCAGCCCTTTGCCATaGAGCGCCGCCAGCCTTACG +
Preference number: 5 (lower is better)
Translates to: LSHLPFELRCTGFPFCFLPSPLP*SAASLT
Trigger: CGTAAGGCTGGCGGCGCTCAATGGCAAAGGGCTGGG...CAGAAAGCAGAAGGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR CAA 90 bp TTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTGGACTGGCTGCGTCTaGAACTCGGAGGCCGCGCTG +
Preference number: 5 (lower is better)
Translates to: FHTEWLLSSCGHGGPARFWTGCV*NSEAAL
Trigger: CAGCGCGGCCTCCGAGTTCAAGACGCAGCCAGTCCA...GAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp AATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGTGGACTGGCTGCGTCTaGAACTCGGAGGCCGCGCTG +
Preference number: 5 (lower is better)
Translates to: NGCSAAVAMVVLPGSSKGWTGCV*NSEAAL
Trigger: CAGCGCGGCCTCCGAGTTCAAGACGCAGCCAGTCCA...CCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp CTGCCTCCACTGCCCTGGTGTGAAGCGCCATCTGGGACTCCAGCGGGGAGAGTTTTGAGGACCCTGACATaGTTTCAGCTGAGGCCTGCC +
Preference number: 5 (lower is better)
Translates to: LPPLPWCEAPSGTPAGRVLRTLT*FQLRPA
Trigger: GGCAGGCCTCAGCTGAAACAATGTCAGGGTCCTCAA...AACTCTCCCCGCTGGAGTCCCAGATGGCGCTTCACACCAGGGCAGTGGAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS CCA 90 bp TTGCTCTATCTGTTCCCCATCCTTTGTCCAGCTCATGGTGGGCTCTaGGAAGCCTTCGGCATCGCACACCAGGGTGACGGACTGGCCGAG +
Preference number: 5 (lower is better)
Translates to: LLYLFPILCPAHGGL*EAFGIAHQGDGLAE
Trigger: CTCGGCCAGTCCGTCACCCTGGTGTGCGATGCCGAAGGCTTCCCAGAGCCCACCATGAGCTGGACAAAGGATGGGGAACAGATAGAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000529356.5
ENST00000531044.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CCA 90 bp CCCCACCTGTGGCCTCTGGTTCATCAAACTGCACCTGGGCTGTGCTaGAGTATGGCTCCACCTGGTCGATGGATGGTGAAGAGGGGGTGT +
Preference number: 5 (lower is better)
Translates to: PHLWPLVHQTAPGLC*SMAPPGRWMVKRGC
Trigger: ACACCCCCTCTTCACCATCCATCGACCAGGTGGAGCCATACTCCAGCACAGCCCAGGTGCAGTTTGATGAACCAGAGGCCACAGGTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000526322.5
ENST00000528590.5
ENST00000530543.5
ENST00000531044.5
ENST00000531817.5
ENST00000533073.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CCA 90 bp TTGGGGTCCTCTCCTCCTCCGTTCGAACCTCCACGATGGGCTCCTTaGACTCATCTTTCGAGAAGGCGGCCTTGCCCTCCTCCATGTCCT +
Preference number: 5 (lower is better)
Translates to: LGSSPPPFEPPRWAP*THLSRRRPCPPPCP
Trigger: AGGACATGGAGGAGGGCAAGGCCGCCTTCTCGAAAGATGAGTCCAAGGAGCCCATCGTGGAGGTTCGAACGGAGGAGGAGAGGACCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000528590.5
ENST00000531044.5
ENST00000533073.5
ENST00000533226.2
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
CDS CCA 90 bp GTCAGTGGCGTGGTCTCGTTGGGCTCTGTGTGTTTCCCTCCATCATaGTTTGGGGTCCTCTCCTCCTCCGTTCGAACCTCCACGATGGGC +
Preference number: 5 (lower is better)
Translates to: VSGVVSLGSVCFPPS*FGVLSSSVRTSTMG
Trigger: GCCCATCGTGGAGGTTCGAACGGAGGAGGAGAGGACCCCAAACCATGATGGAGGGAAACACACAGAGCCCAACGAGACCACGCCACTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000528590.5
ENST00000531044.5
ENST00000533073.5
ENST00000533226.2
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
CDS CCA 90 bp GGGACCGTCTTGACTTCGGCTGGCGCTGGCTTCGTTTCTGTCTCCTaGCACTCTGGCTTTGCTTCTACGGGGCCCTTCTCGGTCTTTGCT +
Preference number: 5 (lower is better)
Translates to: GTVLTSAGAGFVSVS*HSGFASTGPFSVFA
Trigger: AGCAAAGACCGAGAAGGGCCCCGTAGAAGCAAAGCCAGAGTGCCAGGAGACAGAAACGAAGCCAGCGCCAGCCGAAGTCAAGACGGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR CAA 90 bp TTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCATCTCACCCAGCCCTTaGCCATTGAGCGCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: FHTEWLLSSCGHGGPARFISPSP*PLSAAS
Trigger: GCTGGCGGCGCTCAATGGCAAAGGGCTGGGTGAGAT...GAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp GAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGATCTCACCCAGCCCTTaGCCATTGAGCGCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: EWLLSSCGHGGPARFFQRISPSP*PLSAAS
Trigger: GCTGGCGGCGCTCAATGGCAAAGGGCTGGGTGAGAT...CCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp GGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCCGCCTTGGATTTTCCTaGCTGGTTCTCAGCCACCAC +
Preference number: 5 (lower is better)
Translates to: GCSAAVAMVVLPGSSKGGRLGFS*LVLSHH
Trigger: GTGGTGGCTGAGAACCAGCAAGGAAAATCCAAGGCG...GCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTCTCCTCCAGCAGAACTaGGCCATGCCGGTCTTCATG +
Preference number: 5 (lower is better)
Translates to: GENAWEQIPFHRCRQVAALLQQN*AMPVFM
Trigger: CATGAAGACCGGCATGGCCAAGTTCTGCTGGAGGAG...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GGGGCCAGGGCTGTGTGTTCTGGGATCCTCCATTTCCATCCCCAGGAGCTGAGACTCCTCCAGCAGAACTaGGCCATGCCGGTCTTCATG +
Preference number: 5 (lower is better)
Translates to: GARAVCSGILHFHPQELRLLQQN*AMPVFM
Trigger: CATGAAGACCGGCATGGCCAAGTTCTGCTGGAGGAG...TCTCAGCTCCTGGGGATGGAAATGGAGGATCCCAGAACACACAGCCCTGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS TCA 90 bp CCAGCCTTACGGCGTACGTTGTTTCGGGCTTCAGGCCCACGATGGTaGCGATGCCCTCCATGCTGGCTTCCTTGGCATCATACCACTTGG +
Preference number: 5 (lower is better)
Translates to: PALRRTLFRASGPRW*RCPPCWLPWHHTTW
Trigger: CCAAGTGGTATGATGCCAAGGAAGCCAGCATGGAGGGCATCGTCACCATCGTGGGCCTGAAGCCCGAAACAACGTACGCCGTAAGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000525355.5
ENST00000526322.5
ENST00000528590.5
ENST00000530543.5
ENST00000531044.5
ENST00000531817.5
ENST00000533073.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS GCA 90 bp TGTTGCTGGCGGTGCAGATGTACTCTCCGGCATCAGTGTACTGGATaGTCTTCAGGGTCAGCGACGACACACGGGCATGGCTACGCACCA +
Preference number: 5 (lower is better)
Translates to: CCWRCRCTLRHQCTG*SSGSATTHGHGYAP
Trigger: TGGTGCGTAGCCATGCCCGTGTGTCGTCGCTGACCCTGAAGAGCATCCAGTACACTGATGCCGGAGAGTACATCTGCACCGCCAGCAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000531044.5
ENST00000534046.2
ENST00000611284.4
ENST00000613217.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CCA 90 bp ATGGTGTTGCTGGCGGTGCAGATGTACTCTCCGGCATCAGTGTACTaGATGCTCTTCAGGGTCAGCGACGACACACGGGCATGGCTACGC +
Preference number: 5 (lower is better)
Translates to: MVLLAVQMYSPASVY*MLFRVSDDTRAWLR
Trigger: GCGTAGCCATGCCCGTGTGTCGTCGCTGACCCTGAAGAGCATCCAGTACACTGATGCCGGAGAGTACATCTGCACCGCCAGCAACACCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000531044.5
ENST00000534046.2
ENST00000611284.4
ENST00000613217.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CCA 90 bp AGGATGGGCACCCCACCTGTGGCCTCTGGTTCATCAAACTGCACCTaGGCTGTGCTGGAGTATGGCTCCACCTGGTCGATGGATGGTGAA +
Preference number: 5 (lower is better)
Translates to: RMGTPPVASGSSNCT*AVLEYGSTWSMDGE
Trigger: TTCACCATCCATCGACCAGGTGGAGCCATACTCCAGCACAGCCCAGGTGCAGTTTGATGAACCAGAGGCCACAGGTGGGGTGCCCATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000526322.5
ENST00000528590.5
ENST00000530543.5
ENST00000531044.5
ENST00000531817.5
ENST00000533073.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CCA 90 bp CATCATGGTTTGGGGTCCTCTCCTCCTCCGTTCGAACCTCCACGATaGGCTCCTTGGACTCATCTTTCGAGAAGGCGGCCTTGCCCTCCT +
Preference number: 5 (lower is better)
Translates to: HHGLGSSPPPFEPPR*APWTHLSRRRPCPP
Trigger: AGGAGGGCAAGGCCGCCTTCTCGAAAGATGAGTCCAAGGAGCCCATCGTGGAGGTTCGAACGGAGGAGGAGAGGACCCCAAACCATGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000528590.5
ENST00000531044.5
ENST00000533073.5
ENST00000533226.2
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
CDS CCA 90 bp TGGCGTGGTCTCGTTGGGCTCTGTGTGTTTCCCTCCATCATGGTTTaGGGTCCTCTCCTCCTCCGTTCGAACCTCCACGATGGGCTCCTT +
Preference number: 5 (lower is better)
Translates to: WRGLVGLCVFPSIMV*GPLLLRSNLHDGLL
Trigger: AAGGAGCCCATCGTGGAGGTTCGAACGGAGGAGGAGAGGACCCCAAACCATGATGGAGGGAAACACACAGAGCCCAACGAGACCACGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000528590.5
ENST00000531044.5
ENST00000533073.5
ENST00000533226.2
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
CDS CCA 90 bp TGTCTGTGTGGCGTCATTGGGGACCGTCTTGACTTCGGCTGGCGCTaGCTTCGTTTCTGTCTCCTGGCACTCTGGCTTTGCTTCTACGGG +
Preference number: 5 (lower is better)
Translates to: CLCGVIGDRLDFGWR*LRFCLLALWLCFYG
Trigger: CCCGTAGAAGCAAAGCCAGAGTGCCAGGAGACAGAAACGAAGCCAGCGCCAGCCGAAGTCAAGACGGTCCCCAATGACGCCACACAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000528590.5
ENST00000531044.5
ENST00000533073.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
CDS-3UTR CAA 90 bp GGGGCCAGGGCTGTGTGTTCTGGGATCCTCCATTTCCATCCCCAGGAGCTGAGACCCTCATCTGTTTTCTaGATGCCCCGGATCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GARAVCSGILHFHPQELRPSSVF*MPRICR
Trigger: CCTGCAGATCCGGGGCATCAAGAAAACAGATGAGGG...TCTCAGCTCCTGGGGATGGAAATGGAGGATCCCAGAACACACAGCCCTGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTCCCTCATCTGTTTTCTaGATGCCCCGGATCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GENAWEQIPFHRCRQVAAPSSVF*MPRICR
Trigger: CCTGCAGATCCGGGGCATCAAGAAAACAGATGAGGG...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACCCTCATCTGTTTTCTaGATGCCCCGGATCTGCAGG +
Preference number: 5 (lower is better)
Translates to: VAQQLWPWWSCQVLPKGAPSSVF*MPRICR
Trigger: CCTGCAGATCCGGGGCATCAAGAAAACAGATGAGGG...TGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp TTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTCCTGGCCGATGGTGTaGCTGGCGGTGCAGATGTAC +
Preference number: 5 (lower is better)
Translates to: FHTEWLLSSCGHGGPARFSWPMV*LAVQMY
Trigger: GTACATCTGCACCGCCAGCAACACCATCGGCCAGGA...GAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp AATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGTCCTGGCCGATGGTGTaGCTGGCGGTGCAGATGTAC +
Preference number: 5 (lower is better)
Translates to: NGCSAAVAMVVLPGSSKGSWPMV*LAVQMY
Trigger: GTACATCTGCACCGCCAGCAACACCATCGGCCAGGA...CCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp GGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCGCTCTCCACTCAGCTTaGTATTTGAGGATGGGCACC +
Preference number: 5 (lower is better)
Translates to: GCSAAVAMVVLPGSSKGGALHSA*YLRMGT
Trigger: GGTGCCCATCCTCAAATACAAAGCTGAGTGGAGAGC...GCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTCCCAGCCCTTTGCCATaGAGCGCCGCCAGCCTTACG +
Preference number: 5 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAPSPLP*SAASLT
Trigger: CGTAAGGCTGGCGGCGCTCAATGGCAAAGGGCTGGG...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGATCTCACCCAGCCCTTaGCCATTGAGCGCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: RMVAQQLWPWWSCQVLPKISPSP*PLSAAS
Trigger: GCTGGCGGCGCTCAATGGCAAAGGGCTGGGTGAGAT...CTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTTGGACTGGCTGCGTCTaGAACTCGGAGGCCGCGCTG +
Preference number: 5 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAWTGCV*NSEAAL
Trigger: CAGCGCGGCCTCCGAGTTCAAGACGCAGCCAGTCCA...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316851.12
ENST00000531044.5
CDS-3UTR CAA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTTCCATGTCCTTGCCCTaGGCCCCGGGCCCGGCTTTT +
Preference number: 5 (lower is better)
Translates to: VCVRACVCLWCWKCSGEASMSLP*APGPAF
Trigger: AAAAGCCGGGCCCGGGGCCAAGGGCAAGGACATGGA...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GGGAGTGGGTATGCGCTAGTGCTGCCTCCTGAGGAGCGCACTGTTACAAGCCGTGGGGAGTCACCCCGATaGGGAGACAAACACCTTTCA +
Preference number: 5 (lower is better)
Translates to: GSGYALVLPPEERTVTSRGESPR*GDKHLS
Trigger: TGAAAGGTGTTTGTCTCCCAATCGGGGTGACTCCCC...ACGGCTTGTAACAGTGCGCTCCTCAGGAGGCAGCACTAGCGCATACCCACTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CAA 90 bp CCACTGCCCTGGTGTGAAGCGCCATCTGGGACTCCAGCGGGGAGAGTTTTGTGGGGAAGCACTGACAGGTaGGCTCGGCCCCAATTTATT +
Preference number: 5 (lower is better)
Translates to: PLPWCEAPSGTPAGRVLWGSTDR*ARPQFI
Trigger: AATAAATTGGGGCCGAGCCAACCTGTCAGTGCTTCC...CCACAAAACTCTCCCCGCTGGAGTCCCAGATGGCGCTTCACACCAGGGCAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CAA 90 bp GGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCGGAAGCACTGACAGGTaGGCTCGGCCCCAATTTATT +
Preference number: 5 (lower is better)
Translates to: GCSAAVAMVVLPGSSKGGGSTDR*ARPQFI
Trigger: AATAAATTGGGGCCGAGCCAACCTGTCAGTGCTTCC...GCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CAA 90 bp GCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTGGCCCGGGTTCGTTTaGATGGAACTGGGATGGGAG +
Preference number: 5 (lower is better)
Translates to: AAVAMVVLPGSSKGGTDLWPGFV*MELGWE
Trigger: CTCCCATCCCAGTTCCATCAAAACGAACCCGGGCCA...AAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621518.4
CDS TCA 90 bp TGCTCTCGTTCTCCTTTGTCTGTGTGGCGTCATTGGGGACCGTCTTaGCTTCGGCTGGCGCTGGCTTCGTTTCTGTCTCCTGGCACTCTG +
Preference number: 5 (lower is better)
Translates to: CSRSPLSVWRHWGPS*LRLALASFLSPGTL
Trigger: CAGAGTGCCAGGAGACAGAAACGAAGCCAGCGCCAGCCGAAGTCAAGACGGTCCCCAATGACGCCACACAGACAAAGGAGAACGAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000528590.5
ENST00000531044.5
ENST00000533073.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
CDS TCA 90 bp CAGAGGCAGCCATACCTGGGATGGCTGTGGGCTGGGCCGAGGTCCTaGACACAAAATGAGCCGCCTTGGATTTTCCTTGCTGGTTCTCAG +
Preference number: 5 (lower is better)
Translates to: QRQPYLGWLWAGPRS*TQNEPPWIFLAGSQ
Trigger: CTGAGAACCAGCAAGGAAAATCCAAGGCGGCTCATTTTGTGTTCAGGACCTCGGCCCAGCCCACAGCCATCCCAGGTATGGCTGCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525355.5
CDS GCA 90 bp CAAGGTACATGGACTGGGAGTCCTGGCCGATGGTGTTGCTGGCGGTaGAGATGTACTCTCCGGCATCAGTGTACTGGATGCTCTTCAGGG +
Preference number: 5 (lower is better)
Translates to: QGTWTGSPGRWCCWR*RCTLRHQCTGCSSG
Trigger: CCCTGAAGAGCATCCAGTACACTGATGCCGGAGAGTACATCTGCACCGCCAGCAACACCATCGGCCAGGACTCCCAGTCCATGTACCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000531044.5
ENST00000534046.2
ENST00000611284.4
ENST00000613217.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CCA 90 bp CTCCTTTGTCTGTGTGGCGTCATTGGGGACCGTCTTGACTTCGGCTaGCGCTGGCTTCGTTTCTGTCTCCTGGCACTCTGGCTTTGCTTC +
Preference number: 5 (lower is better)
Translates to: LLCLCGVIGDRLDFG*RWLRFCLLALWLCF
Trigger: GAAGCAAAGCCAGAGTGCCAGGAGACAGAAACGAAGCCAGCGCCAGCCGAAGTCAAGACGGTCCCCAATGACGCCACACAGACAAAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000528590.5
ENST00000531044.5
ENST00000533073.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
CDS CCA 90 bp GGACTTCAGCATGACGTGGTCACTGCCAGACGGGAGCCTGATCTCTaGTTTCCACTCGGAGGAGAGCTTCTGGGAGAAACCGGCAAGAAG +
Preference number: 5 (lower is better)
Translates to: GLQHDVVTARREPDL*FPLGGELLGETGKK
Trigger: CTTCTTGCCGGTTTCTCCCAGAAGCTCTCCTCCGAGTGGAAACCAGAGATCAGGCTCCCGTCTGGCAGTGACCACGTCATGCTGAAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530090.1
CDS-3UTR CAA 90 bp CAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTGCTGTAATTGGAGCTaGGCAGCAGCTGGCCATCCC +
Preference number: 5 (lower is better)
Translates to: QLWPWWSCQVLPKGALIFCCNWS*AAAGHP
Trigger: GGGATGGCCAGCTGCTGCCAAGCTCCAATTACAGCA...AAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCCCCAGCCCTTTGCCATaGAGCGCCGCCAGCCTTACG +
Preference number: 5 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSPSPLP*SAASLT
Trigger: CGTAAGGCTGGCGGCGCTCAATGGCAAAGGGCTGGG...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGACCCAGCCCTTTGCCATaGAGCGCCGCCAGCCTTACG +
Preference number: 5 (lower is better)
Translates to: PWWSCQVLPKGALIFFIGPSPLP*SAASLT
Trigger: CGTAAGGCTGGCGGCGCTCAATGGCAAAGGGCTGGG...TCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTATCTCACCCAGCCCTTaGCCATTGAGCGCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAISPSP*PLSAAS
Trigger: GCTGGCGGCGCTCAATGGCAAAGGGCTGGGTGAGAT...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTCGCCTTGGATTTTCCTaGCTGGTTCTCAGCCACCAC +
Preference number: 5 (lower is better)
Translates to: AAVAMVVLPGSSKGGTDLRLGFS*LVLSHH
Trigger: GTGGTGGCTGAGAACCAGCAAGGAAAATCCAAGGCG...AAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTTCATTGGGGACCGTCTaGACTTCGGCTGGCGCTGGC +
Preference number: 5 (lower is better)
Translates to: CVRACVCLWCWKCSGEAASLGTV*TSAGAG
Trigger: GCCAGCGCCAGCCGAAGTCAAGACGGTCCCCAATGA...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCCAGGAAGAGGCCAAGTaGTATCTGGTGGAGACAATG +
Preference number: 5 (lower is better)
Translates to: GCSAAVAMVVLPGSSKGGQEEAK*YLVETM
Trigger: CATTGTCTCCACCAGATACAACTTGGCCTCTTCCTG...GCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621518.4
ENST00000621850.4
CDS TCA 90 bp GCCAGGGCACTAGCGAGGAGCAGGGCTCTCTCTAACGTCAAACCTTaGGACTGTGCACCTGCCAAACCCTGCAGTTCAGGTAAAGTCTGG +
Preference number: 5 (lower is better)
Translates to: ARALARSRALSNVKP*DCAPAKPCSSGKVW
Trigger: CCAGACTTTACCTGAACTGCAGGGTTTGGCAGGTGCACAGTCTCAAGGTTTGACGTTAGAGAGAGCCCTGCTCCTCGCTAGTGCCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525691.5
CDS GCA 90 bp TATTTGAGGATGGGCACCCCACCTGTGGCCTCTGGTTCATCAAACTaGACCTGGGCTGTGCTGGAGTATGGCTCCACCTGGTCGATGGAT +
Preference number: 5 (lower is better)
Translates to: YLRMGTPPVASGSSN*TWAVLEYGSTWSMD
Trigger: ATCCATCGACCAGGTGGAGCCATACTCCAGCACAGCCCAGGTGCAGTTTGATGAACCAGAGGCCACAGGTGGGGTGCCCATCCTCAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000526322.5
ENST00000528590.5
ENST00000530543.5
ENST00000531044.5
ENST00000531817.5
ENST00000533073.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CCA 90 bp GCACTTCAAGGTACATGGACTGGGAGTCCTGGCCGATGGTGTTGCTaGCGGTGCAGATGTACTCTCCGGCATCAGTGTACTGGATGCTCT +
Preference number: 5 (lower is better)
Translates to: ALQGTWTGSPGRWCC*RCRCTLRHQCTGCS
Trigger: AGAGCATCCAGTACACTGATGCCGGAGAGTACATCTGCACCGCCAGCAACACCATCGGCCAGGACTCCCAGTCCATGTACCTTGAAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000531044.5
ENST00000534046.2
ENST00000611284.4
ENST00000613217.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CCA 90 bp CCACTCAGCTTTGTATTTGAGGATGGGCACCCCACCTGTGGCCTCTaGTTCATCAAACTGCACCTGGGCTGTGCTGGAGTATGGCTCCAC +
Preference number: 5 (lower is better)
Translates to: PLSFVFEDGHPTCGL*FIKLHLGCAGVWLH
Trigger: GTGGAGCCATACTCCAGCACAGCCCAGGTGCAGTTTGATGAACCAGAGGCCACAGGTGGGGTGCCCATCCTCAAATACAAAGCTGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000526322.5
ENST00000528590.5
ENST00000530543.5
ENST00000531044.5
ENST00000531817.5
ENST00000533073.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp GGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCGAGATGTCTTTATCTTaGGCATCTCCTGCCACTTGG +
Preference number: 5 (lower is better)
Translates to: GCSAAVAMVVLPGSSKGGEMSLS*ASPATW
Trigger: CCAAGTGGCAGGAGATGCCAAAGATAAAGACATCTC...GCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp GAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGCCCTCATCTGTTTTCTaGATGCCCCGGATCTGCAGG +
Preference number: 5 (lower is better)
Translates to: EWLLSSCGHGGPARFFQRPSSVF*MPRICR
Trigger: CCTGCAGATCCGGGGCATCAAGAAAACAGATGAGGG...CCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp AGTTTTGTGGCTGGGTTGAGAGGCACTACCCTGCCTGAGCTACTGTGCAGCATGACGGACTGGCCGAGGTaGGCGGTGGCATTCACAATA +
Preference number: 5 (lower is better)
Translates to: SFVAGLRGTTLPELLCSMTDWPR*AVAFTI
Trigger: TATTGTGAATGCCACCGCCAACCTCGGCCAGTCCGT...CATGCTGCACAGTAGCTCAGGCAGGGTAGTGCCTCTCAACCCAGCCACAAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CAA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTTCCTGGCCGATGGTGTaGCTGGCGGTGCAGATGTAC +
Preference number: 5 (lower is better)
Translates to: CVRACVCLWCWKCSGEAASWPMV*LAVQMY
Trigger: GTACATCTGCACCGCCAGCAACACCATCGGCCAGGA...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTTCCTGGCCGATGGTGTaGCTGGCGGTGCAGATGTAC +
Preference number: 5 (lower is better)
Translates to: VCVRACVCLWCWKCSGEASWPMV*LAVQMY
Trigger: GTACATCTGCACCGCCAGCAACACCATCGGCCAGGA...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp ACCTTCTCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGTGCTGTAATTGGAGCTaGGCAGCAGCTGGCCATCCC +
Preference number: 5 (lower is better)
Translates to: TFSSTQNGCSAAVAMVVLCCNWS*AAAGHP
Trigger: GGGATGGCCAGCTGCTGCCAAGCTCCAATTACAGCA...CAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGAGAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp GGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCAGAGGGGGTGTCTGCTaGAACAAGGATGAATTCCAA +
Preference number: 5 (lower is better)
Translates to: GCSAAVAMVVLPGSSKGGRGGVC*NKDEFQ
Trigger: TTGGAATTCATCCTTGTTCAAGCAGACACCCCCTCT...GCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp TCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATGCTCTCCACTCAGCTTaGTATTTGAGGATGGGCACC +
Preference number: 5 (lower is better)
Translates to: SAAVAMVVLPGSSKGGTDALHSA*YLRMGT
Trigger: GGTGCCCATCCTCAAATACAAAGCTGAGTGGAGAGC...ATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp GTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCATCCATGCTGGCTTCCTaGGCATCATACCACTTGGAA +
Preference number: 5 (lower is better)
Translates to: VAQQLWPWWSCQVLPKGASMLAS*ASYHLE
Trigger: TTCCAAGTGGTATGATGCCAAGGAAGCCAGCATGGA...TGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp GGGAGTGGGTATGCGCTAGTGCTGCCTCCTGAGGAGCGCACTGTTACAAGCCGTTCCATGCTGGCTTCCTaGGCATCATACCACTTGGAA +
Preference number: 5 (lower is better)
Translates to: GSGYALVLPPEERTVTSRSMLAS*ASYHLE
Trigger: TTCCAAGTGGTATGATGCCAAGGAAGCCAGCATGGA...ACGGCTTGTAACAGTGCGCTCCTCAGGAGGCAGCACTAGCGCATACCCACTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CAA 90 bp TTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTCCATGCTGGCTTCCTaGGCATCATACCACTTGGAA +
Preference number: 5 (lower is better)
Translates to: LLSSCGHGGPARFFQRGHSMLAS*ASYHLE
Trigger: TTCCAAGTGGTATGATGCCAAGGAAGCCAGCATGGA...GTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTGCCTTACGGCGTACGTaGTTTCGGGCTTCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAALRRT*FRASGP
Trigger: TGGGCCTGAAGCCCGAAACAACGTACGCCGTAAGGC...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTCCCAGCCCTTTGCCATaGAGCGCCGCCAGCCTTACG +
Preference number: 5 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLPSPLP*SAASLT
Trigger: CGTAAGGCTGGCGGCGCTCAATGGCAAAGGGCTGGG...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp GTGGATGCTTCCAACCTGTCCTGTAGACTGATGCTCAAAGCCATTCTGTGGGTCATCTCACCCAGCCCTTaGCCATTGAGCGCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: VDASNLSCRLMLKAILWVISPSP*PLSAAS
Trigger: GCTGGCGGCGCTCAATGGCAAAGGGCTGGGTGAGAT...GACCCACAGAATGGCTTTGAGCATCAGTCTACAGGACAGGTTGGAAGCATCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CAA 90 bp AGCACACACACTGATATTACCAAGCAGGATTCAGCCCTGAGTCTCCACAAGGGATGGACTGGCTGCGTCTaGAACTCGGAGGCCGCGCTG +
Preference number: 5 (lower is better)
Translates to: STHTDITKQDSALSLHKGWTGCV*NSEAAL
Trigger: CAGCGCGGCCTCCGAGTTCAAGACGCAGCCAGTCCA...TCCCTTGTGGAGACTCAGGGCTGAATCCTGCTTGGTAATATCAGTGTGTGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CAA 90 bp GAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGCGCCTTGGATTTTCCTaGCTGGTTCTCAGCCACCAC +
Preference number: 5 (lower is better)
Translates to: EWLLSSCGHGGPARFFQRRLGFS*LVLSHH
Trigger: GTGGTGGCTGAGAACCAGCAAGGAAAATCCAAGGCG...CCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp AATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGCGCCTTGGATTTTCCTaGCTGGTTCTCAGCCACCAC +
Preference number: 5 (lower is better)
Translates to: NGCSAAVAMVVLPGSSKGRLGFS*LVLSHH
Trigger: GTGGTGGCTGAGAACCAGCAAGGAAAATCCAAGGCG...CCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGTCCATGTCCTTGCCCTaGGCCCCGGGCCCGGCTTTT +
Preference number: 5 (lower is better)
Translates to: NKREGPRSTECWVGMLMESMSLP*APGPAF
Trigger: AAAAGCCGGGCCCGGGGCCAAGGGCAAGGACATGGA...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTCCCTCCTCCATGTCCTaGCCCTTGGCCCCGGGCCCG +
Preference number: 5 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELPSSMS*PLAPGP
Trigger: CGGGCCCGGGGCCAAGGGCAAGGACATGGAGGAGGG...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTTTCGAGAAGGCGGCCTaGCCCTCCTCCATGTCCTTG +
Preference number: 5 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAFEKAA*PSSMSL
Trigger: CAAGGACATGGAGGAGGGCAAGGCCGCCTTCTCGAA...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTTCCCTCCATCATGGTTaGGGGTCCTCTCCTCCTCCG +
Preference number: 5 (lower is better)
Translates to: CVRACVCLWCWKCSGEAASLHHG*GSSPPP
Trigger: CGGAGGAGGAGAGGACCCCAAACCATGATGGAGGGA...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTTCCCTCCATCATGGTTaGGGGTCCTCTCCTCCTCCG +
Preference number: 5 (lower is better)
Translates to: VCVRACVCLWCWKCSGEASLHHG*GSSPPP
Trigger: CGGAGGAGGAGAGGACCCCAAACCATGATGGAGGGA...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTCCTGGCACTCTGGCTTaGCTTCTACGGGGCCCTTCT +
Preference number: 5 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAPGTLA*LLRGPS
Trigger: AGAAGGGCCCCGTAGAAGCAAAGCCAGAGTGCCAGG...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTCCTGGCACTCTGGCTTaGCTTCTACGGGGCCCTTCT +
Preference number: 5 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAPGTLA*LLRGPS
Trigger: AGAAGGGCCCCGTAGAAGCAAAGCCAGAGTGCCAGG...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GGGGCCAGGGCTGTGTGTTCTGGGATCCTCCATTTCCATCCCCAGGAGCTGAGAACCACTTTGACAGTCTaGACAAGGTATGGCATGGGC +
Preference number: 5 (lower is better)
Translates to: GARAVCSGILHFHPQELRTTLTV*TRYGMG
Trigger: GCCCATGCCATACCTTGTCAAGACTGTCAAAGTGGT...TCTCAGCTCCTGGGGATGGAAATGGAGGATCCCAGAACACACAGCCCTGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTCGGACTGGCTGCGTCTaGAACTCGGAGGCCGCGCTG +
Preference number: 5 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFRTGCV*NSEAAL
Trigger: CAGCGCGGCCTCCGAGTTCAAGACGCAGCCAGTCCG...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000401611.6
CDS-3UTR CAA 90 bp CAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCCAGGAAGAGGCCAAGTaGTATCTGGTGGAGACAATG +
Preference number: 5 (lower is better)
Translates to: QQLWPWWSCQVLPKGALIQEEAK*YLVETM
Trigger: CATTGTCTCCACCAGATACAACTTGGCCTCTTCCTG...GATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp TCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATTTCCACACAGAATGGTaGCTCAGCAGCTGTGGCCAT +
Preference number: 5 (lower is better)
Translates to: SAAVAMVVLPGSSKGGTDFHTEW*LSSCGH
Trigger: ATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAA...ATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp AATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGTTGGCACATCATGGCTaGGCCCCGTTCACAGAGACA +
Preference number: 5 (lower is better)
Translates to: NGCSAAVAMVVLPGSSKGLAHHG*APFTET
Trigger: TGTCTCTGTGAACGGGGCCAAGCCATGATGTGCCAA...CCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CAA 90 bp AATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGGGAGTCACCCCGATaGGGAGACAAACACCTTTCA +
Preference number: 5 (lower is better)
Translates to: NGCSAAVAMVVLPGSSKGGESPR*GDKHLS
Trigger: TGAAAGGTGTTTGTCTCCCAATCGGGGTGACTCCCC...CCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CAA 90 bp GAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGTTGAGGACCCTGACATaGTTTCAGCTGAGGCCTGCC +
Preference number: 5 (lower is better)
Translates to: EWLLSSCGHGGPARFFQRLRTLT*FQLRPA
Trigger: GGCAGGCCTCAGCTGAAACAATGTCAGGGTCCTCAA...CCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS TCA 90 bp GAAACCATGAGATCGTGGCACTGGGATAGGCAAATACCTCGCAGGTaGTGTTCACCTGGTTCCCCTCCCAAGTGTACACAGCCACAGGGC +
Preference number: 5 (lower is better)
Translates to: ETMRSWHWDRQIPRR*CSPGSPPKCTQPQG
Trigger: GCCCTGTGGCTGTGTACACTTGGGAGGGGAACCAGGTGAACATCACCTGCGAGGTATTTGCCTATCCCAGTGCCACGATCTCATGGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000531044.5
ENST00000534046.2
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS GCA 90 bp ATTGCACTTCAAGGTACATGGACTGGGAGTCCTGGCCGATGGTGTTaGTGGCGGTGCAGATGTACTCTCCGGCATCAGTGTACTGGATGC +
Preference number: 5 (lower is better)
Translates to: IALQGTWTGSPGRWC*WRCRCTLRHQCTGC
Trigger: GCATCCAGTACACTGATGCCGGAGAGTACATCTGCACCGCCAGCAACACCATCGGCCAGGACTCCCAGTCCATGTACCTTGAAGTGCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000531044.5
ENST00000534046.2
ENST00000611284.4
ENST00000613217.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CCA 90 bp AGCTTTGGGGCATATTGCACTTCAAGGTACATGGACTGGGAGTCCTaGCCGATGGTGTTGCTGGCGGTGCAGATGTACTCTCCGGCATCA +
Preference number: 5 (lower is better)
Translates to: SFGAYCTSRYMDWES*PMVLLAVQMYSPAS
Trigger: TGATGCCGGAGAGTACATCTGCACCGCCAGCAACACCATCGGCCAGGACTCCCAGTCCATGTACCTTGAAGTGCAATATGCCCCAAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000531044.5
ENST00000534046.2
ENST00000611284.4
ENST00000613217.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp CAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTGTGAGCTTTTCTCCATaGGGGGAGAACCAGGAGATG +
Preference number: 5 (lower is better)
Translates to: QLWPWWSCQVLPKGALIFVSFSP*GENQEM
Trigger: CATCTCCTGGTTCTCCCCCAATGGAGAAAAGCTCAC...AAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTACGGACTGGCCGAGGTaGGCGGTGGCATTCACAATA +
Preference number: 5 (lower is better)
Translates to: VCVRACVCLWCWKCSGEATDWPR*AVAFTI
Trigger: TATTGTGAATGCCACCGCCAACCTCGGCCAGTCCGT...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AGCTCTCCCACACTGACCTGGGATCCTTATGCTCTGCCCTGTGCCCAAAAACCATCTGTTCCCCATCCTTaGTCCAGCTCATGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: SSPTLTWDPYALPCAQKPSVPHP*SSSWWA
Trigger: AGCCCACCATGAGCTGGACAAAGGATGGGGAACAGA...TGGTTTTTGGGCACAGGGCAGAGCATAAGGATCCCAGGTCAGTGTGGGAGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CAA 90 bp TTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCCAGGGCCCTGTAGCTTaGGGGCATATTGCACTTCAA +
Preference number: 5 (lower is better)
Translates to: FHTEWLLSSCGHGGPARFQGPVA*GHIALQ
Trigger: TTGAAGTGCAATATGCCCCAAAGCTACAGGGCCCTG...GAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTTGCTGTAATTGGAGCTaGGCAGCAGCTGGCCATCCC +
Preference number: 5 (lower is better)
Translates to: CVRACVCLWCWKCSGEAACCNWS*AAAGHP
Trigger: GGGATGGCCAGCTGCTGCCAAGCTCCAATTACAGCA...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGCACTCAGCTTTGTATTaGAGGATGGGCACCCCACCT +
Preference number: 5 (lower is better)
Translates to: EWLLSSCGHGGPARFFQRHSALY*RMGTPP
Trigger: AGGTGGGGTGCCCATCCTCAAATACAAAGCTGAGTG...CCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp AGGGACTTCAGCATGACGTGGTCACTGCCAGACGGGAGCCTGATCTCTGGTTTCGCTCTCCACTCAGCTTaGTATTTGAGGATGGGCACC +
Preference number: 5 (lower is better)
Translates to: RDFSMTWSLPDGSLISGFALHSA*YLRMGT
Trigger: GGTGCCCATCCTCAAATACAAAGCTGAGTGGAGAGC...GAAACCAGAGATCAGGCTCCCGTCTGGCAGTGACCACGTCATGCTGAAGTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR CAA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTGCCTTACGGCGTACGTaGTTTCGGGCTTCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWAALRRT*FRASGP
Trigger: TGGGCCTGAAGCCCGAAACAACGTACGCCGTAAGGC...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAACCCAGCCCTTTGCCATaGAGCGCCGCCAGCCTTACG +
Preference number: 5 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCEPSPLP*SAASLT
Trigger: CGTAAGGCTGGCGGCGCTCAATGGCAAAGGGCTGGG...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTATCTCACCCAGCCCTTaGCCATTGAGCGCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLISPSP*PLSAAS
Trigger: GCTGGCGGCGCTCAATGGCAAAGGGCTGGGTGAGAT...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTTGCACTGGGTTCCCCTaGGACTGGCTGCGTCTTGAA +
Preference number: 5 (lower is better)
Translates to: VCVRACVCLWCWKCSGEACTGFP*DWLRLE
Trigger: TTCAAGACGCAGCCAGTCCAAGGGGAACCCAGTGCA...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316851.12
ENST00000531044.5
CDS-3UTR CAA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTCCGCCGTCATCCTGCTaGATCAGGTTCACTTTAATA +
Preference number: 5 (lower is better)
Translates to: GENAWEQIPFHRCRQVAAPPSSC*IRFTLI
Trigger: TATTAAAGTGAACCTGATCAAGCAGGATGACGGCGG...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTAGTGGCGTGGTCTCGTaGGGCTCTGTGTGTTTCCCT +
Preference number: 5 (lower is better)
Translates to: CVRACVCLWCWKCSGEAASGVVS*GSVCFP
Trigger: AGGGAAACACACAGAGCCCAACGAGACCACGCCACT...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTAGTGGCGTGGTCTCGTaGGGCTCTGTGTGTTTCCCT +
Preference number: 5 (lower is better)
Translates to: VCVRACVCLWCWKCSGEASGVVS*GSVCFP
Trigger: AGGGAAACACACAGAGCCCAACGAGACCACGCCACT...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGTCTGTGTGGCGTCATaGGGGACCGTCTTGACTTCG +
Preference number: 5 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAVCVAS*GTVLTS
Trigger: CGAAGTCAAGACGGTCCCCAATGACGCCACACAGAC...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCAGGAAGAGGCCAAGTaGTATCTGGTGGAGACAATG +
Preference number: 5 (lower is better)
Translates to: SAAVAMVVLPGSSKGGTDQEEAK*YLVETM
Trigger: CATTGTCTCCACCAGATACAACTTGGCCTCTTCCTG...ATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp CAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCCACACAGAATGGTaGCTCAGCAGCTGTGGCCAT +
Preference number: 5 (lower is better)
Translates to: QLWPWWSCQVLPKGALIFFHTEW*LSSCGH
Trigger: ATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAA...AAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp TTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCACACAGAATGGTaGCTCAGCAGCTGTGGCCAT +
Preference number: 5 (lower is better)
Translates to: FHTEWLLSSCGHGGPARFFHTEW*LSSCGH
Trigger: ATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAA...GAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp CAGACACCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTGGGACTGGCTGCGTCTaGAACTCGGAGGCCGCGCTG +
Preference number: 5 (lower is better)
Translates to: QTPRLSHSTVCSKISLHVGTGCV*NSEAAL
Trigger: CAGCGCGGCCTCCGAGTTCAAGACGCAGCCAGTCCC...AACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGGTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS TCA 90 bp CTGGGGTCACCTCCAGATAGCTGGCAGAGGGGGTGTTGTAGATCTTaGTATTGCTGTAATTGGAGCTTGGCAGCAGCTGGCCATCCCGAA +
Preference number: 5 (lower is better)
Translates to: LGSPPDSWQRGCCRS*YCCNWSLAAAGHPE
Trigger: TTCGGGATGGCCAGCTGCTGCCAAGCTCCAATTACAGCAATATCAAGATCTACAACACCCCCTCTGCCAGCTATCTGGAGGTGACCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000530543.5
ENST00000531044.5
ENST00000534046.2
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS GCA 90 bp TTTAATAGAGTTTCCATCCTCTCCCATCTGCCCTTCGAGCTTAGGTaGACTGGGTTCCCGTGGAGGAGGGCTATGGACTGGCTGCGTCTT +
Preference number: 5 (lower is better)
Translates to: FNRVSILSHLPFELR*TGFPWRRAMDWLRL
Trigger: AAGACGCAGCCAGTCCATAGCCCTCCTCCACGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGGAAACTCTATTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530543.5
CDS-3UTR CAA 90 bp GGGGCCAGGGCTGTGTGTTCTGGGATCCTCCATTTCCATCCCCAGGAGCTGAGATGGCATAAGAAGAATTaGGACTCTCCAACGCTGATC +
Preference number: 5 (lower is better)
Translates to: GARAVCSGILHFHPQELRWHKKN*DSPTLI
Trigger: GATCAGCGTTGGAGAGTCCAAATTCTTCTTATGCCA...TCTCAGCTCCTGGGGATGGAAATGGAGGATCCCAGAACACACAGCCCTGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTCCCTCATCTGTTTTCTaGATGCCCCGGATCTGCAGG +
Preference number: 5 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAPSSVF*MPRICR
Trigger: CCTGCAGATCCGGGGCATCAAGAAAACAGATGAGGG...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTACGGACTGGCCGAGGTaGGCGGTGGCATTCACAATA +
Preference number: 5 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWATDWPR*AVAFTI
Trigger: TATTGTGAATGCCACCGCCAACCTCGGCCAGTCCGT...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTTCTGTTCCCCATCCTTaGTCCAGCTCATGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: VCVRACVCLWCWKCSGEASVPHP*SSSWWA
Trigger: AGCCCACCATGAGCTGGACAAAGGATGGGGAACAGA...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTTCTGTTCCCCATCCTTaGTCCAGCTCATGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: CVRACVCLWCWKCSGEAASVPHP*SSSWWA
Trigger: AGCCCACCATGAGCTGGACAAAGGATGGGGAACAGA...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTTCCTGCTCGCCAGCCTaGTTCTCAGCAATGCAGATG +
Preference number: 5 (lower is better)
Translates to: VCVRACVCLWCWKCSGEASCSPA*FSAMQM
Trigger: CATCTGCATTGCTGAGAACAAGGCTGGCGAGCAGGA...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTTCCTGCTCGCCAGCCTaGTTCTCAGCAATGCAGATG +
Preference number: 5 (lower is better)
Translates to: CVRACVCLWCWKCSGEAASCSPA*FSAMQM
Trigger: CATCTGCATTGCTGAGAACAAGGCTGGCGAGCAGGA...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTGGTTTTGCAAAGACTTaGAGGTGGATGGTCGCATCC +
Preference number: 5 (lower is better)
Translates to: SSTQNGCSAAVAMVVLPGGFAKT*RWMVAS
Trigger: GGATGCGACCATCCACCTCAAAGTCTTTGCAAAACC...ACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTCCCATCCAGAGTCTCTaGCTTCTCTGGTCGAGTCCA +
Preference number: 5 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAPIQSL*LLWSSP
Trigger: TGGACTCGACCAGAGAAGCAAGAGACTCTGGATGGG...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316851.12
ENST00000615112.4
CDS-3UTR CAA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTCCTGGCCGATGGTGTaGCTGGCGGTGCAGATGTAC +
Preference number: 5 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLSWPMV*LAVQMY
Trigger: GTACATCTGCACCGCCAGCAACACCATCGGCCAGGA...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp AGACTGATGCTCAAAGCCATTCTGTGGGTCACTGCTGAACCACGGCCCCACTCTCAGGGCCCTGTAGCTTaGGGGCATATTGCACTTCAA +
Preference number: 5 (lower is better)
Translates to: RLMLKAILWVTAEPRPHSQGPVA*GHIALQ
Trigger: TTGAAGTGCAATATGCCCCAAAGCTACAGGGCCCTG...AGAGTGGGGCCGTGGTTCAGCAGTGACCCACAGAATGGCTTTGAGCATCAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CAA 90 bp AGTTTTGTGGCTGGGTTGAGAGGCACTACCCTGCCTGAGCTACTGTGCAGCATGCACTCAGCTTTGTATTaGAGGATGGGCACCCCACCT +
Preference number: 5 (lower is better)
Translates to: SFVAGLRGTTLPELLCSMHSALY*RMGTPP
Trigger: AGGTGGGGTGCCCATCCTCAAATACAAAGCTGAGTG...CATGCTGCACAGTAGCTCAGGCAGGGTAGTGCCTCTCAACCCAGCCACAAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CAA 90 bp GAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGTCCATGCTGGCTTCCTaGGCATCATACCACTTGGAA +
Preference number: 5 (lower is better)
Translates to: EWLLSSCGHGGPARFFQRSMLAS*ASYHLE
Trigger: TTCCAAGTGGTATGATGCCAAGGAAGCCAGCATGGA...CCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTGCCTTACGGCGTACGTaGTTTCGGGCTTCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLALRRT*FRASGP
Trigger: TGGGCCTGAAGCCCGAAACAACGTACGCCGTAAGGC...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTCCCAGCCCTTTGCCATaGAGCGCCGCCAGCCTTACG +
Preference number: 5 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSPSPLP*SAASLT
Trigger: CGTAAGGCTGGCGGCGCTCAATGGCAAAGGGCTGGG...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTATCTCACCCAGCCCTTaGCCATTGAGCGCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFISPSP*PLSAAS
Trigger: GCTGGCGGCGCTCAATGGCAAAGGGCTGGGTGAGAT...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp CCGTCATCCTGCTTGATCAGGTTCACTTTAATAGAGTTTCCATCCTCTCCCATCTGGACTGGCTGCGTCTaGAACTCGGAGGCCGCGCTG +
Preference number: 5 (lower is better)
Translates to: PSSCLIRFTLIEFPSSPIWTGCV*NSEAAL
Trigger: CAGCGCGGCCTCCGAGTTCAAGACGCAGCCAGTCCA...GATGGGAGAGGATGGAAACTCTATTAAAGTGAACCTGATCAAGCAGGATGACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR CAA 90 bp CCATCCTCTCCCATCTGCCCTTCGAGCTTAGGTGCACTGGGTTCCCCTTCTGCTCCGCCGTCATCCTGCTaGATCAGGTTCACTTTAATA +
Preference number: 5 (lower is better)
Translates to: PSSPICPSSLGALGSPSAPPSSC*IRFTLI
Trigger: TATTAAAGTGAACCTGATCAAGCAGGATGACGGCGG...AGCAGAAGGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR CAA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTCGCCTTGGATTTTCCTaGCTGGTTCTCAGCCACCAC +
Preference number: 5 (lower is better)
Translates to: CVRACVCLWCWKCSGEAARLGFS*LVLSHH
Trigger: GTGGTGGCTGAGAACCAGCAAGGAAAATCCAAGGCG...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS GCA 90 bp TGCTTGATCAGGTTCACTTTAATAGAGTTTCCATCCTCTCCCATCTaGCCTTCGAGCTTAGGTGCACTGGGTTCCCGGACTGGCTGCGTC +
Preference number: 5 (lower is better)
Translates to: CLIRFTLIEFPSSPI*PSSLGALGSRTGCV
Trigger: GACGCAGCCAGTCCGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGGAAACTCTATTAAAGTGAACCTGATCAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401611.6
ENST00000525355.5
ENST00000533073.5
CDS GCA 90 bp TGCTTGATCAGGTTCACTTTAATAGAGTTTCCATCCTCTCCCATCTaGCCTTCGAGCTTAGGTGCACTGGGTTCCCCTGGGACTGGCTGC +
Preference number: 5 (lower is better)
Translates to: CLIRFTLIEFPSSPI*PSSLGALGSPGTGC
Trigger: GCAGCCAGTCCCAGGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGGAAACTCTATTAAAGTGAACCTGATCAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACGATGAGATCCTTAGTTaGCAGCATTGTAATCTGCTG +
Preference number: 5 (lower is better)
Translates to: LLSSCGHGGPARFFQRGHDEILS*QHCNLL
Trigger: CAGCAGATTACAATGCTGCAAACTAAGGATCTCATC...GTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGTGAGCTTTTCTCCATaGGGGGAGAACCAGGAGATG +
Preference number: 5 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAVSFSP*GENQEM
Trigger: CATCTCCTGGTTCTCCCCCAATGGAGAAAAGCTCAC...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCTCCTGCTCGCCAGCCTaGTTCTCAGCAATGCAGATG +
Preference number: 5 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSSCSPA*FSAMQM
Trigger: CATCTGCATTGCTGAGAACAAGGCTGGCGAGCAGGA...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGTCCTGCTCGCCAGCCTaGTTCTCAGCAATGCAGATG +
Preference number: 5 (lower is better)
Translates to: WSCQVLPKGALIFFIGTGSCSPA*FSAMQM
Trigger: CATCTGCATTGCTGAGAACAAGGCTGGCGAGCAGGA...CCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp AAAACCTTCTCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCTCCTGCTCGCCAGCCTaGTTCTCAGCAATGCAGATG +
Preference number: 5 (lower is better)
Translates to: KTFSSTQNGCSAAVAMVVSCSPA*FSAMQM
Trigger: CATCTGCATTGCTGAGAACAAGGCTGGCGAGCAGGA...GACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGAGAAGGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp GGCTGGGGCATTCAGGAAGCACTGACAGGTTGGCTCGGCCCCAATTTATTAACCGGTTTTGCAAAGACTTaGAGGTGGATGGTCGCATCC +
Preference number: 5 (lower is better)
Translates to: GWGIQEALTGWLGPNLLTGFAKT*RWMVAS
Trigger: GGATGCGACCATCCACCTCAAAGTCTTTGCAAAACC...GGTTAATAAATTGGGGCCGAGCCAACCTGTCAGTGCTTCCTGAATGCCCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CAA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTCAGGGCCCTGTAGCTTaGGGGCATATTGCACTTCAA +
Preference number: 5 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAQGPVA*GHIALQ
Trigger: TTGAAGTGCAATATGCCCCAAAGCTACAGGGCCCTG...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTGCTGTAATTGGAGCTaGGCAGCAGCTGGCCATCCC +
Preference number: 5 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLCCNWS*AAAGHP
Trigger: GGGATGGCCAGCTGCTGCCAAGCTCCAATTACAGCA...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTCACTCAGCTTTGTATTaGAGGATGGGCACCCCACCT +
Preference number: 5 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAHSALY*RMGTPP
Trigger: AGGTGGGGTGCCCATCCTCAAATACAAAGCTGAGTG...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTCTCCACTCAGCTTaGTATTTGAGGATGGGCACC +
Preference number: 5 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAALHSA*YLRMGT
Trigger: GGTGCCCATCCTCAAATACAAAGCTGAGTGGAGAGC...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GGTGTGGCAAAGCCATCGACATTACAAGATGAAGAACTGAGTCCACTGAACAGCGCCTTACGGCGTACGTaGTTTCGGGCTTCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: GVAKPSTLQDEELSPLNSALRRT*FRASGP
Trigger: TGGGCCTGAAGCCCGAAACAACGTACGCCGTAAGGC...GCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GGGAGTTTTTATTCAGTAGAAGGTCCATCCCCAAGCACACACACTGATATTACCTGGACTGGCTGCGTCTaGAACTCGGAGGCCGCGCTG +
Preference number: 5 (lower is better)
Translates to: GSFYSVEGPSPSTHTDITWTGCV*NSEAAL
Trigger: CAGCGCGGCCTCCGAGTTCAAGACGCAGCCAGTCCA...GGTAATATCAGTGTGTGTGCTTGGGGATGGACCTTCTACTGAATAAAAACTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CAA 90 bp AATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGCCGCCGTCATCCTGCTaGATCAGGTTCACTTTAATA +
Preference number: 5 (lower is better)
Translates to: NGCSAAVAMVVLPGSSKGPPSSC*IRFTLI
Trigger: TATTAAAGTGAACCTGATCAAGCAGGATGACGGCGG...CCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp TCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTCCGCCGTCATCCTGCTaGATCAGGTTCACTTTAATA +
Preference number: 5 (lower is better)
Translates to: SSTQNGCSAAVAMVVLPGPPSSC*IRFTLI
Trigger: TATTAAAGTGAACCTGATCAAGCAGGATGACGGCGG...ACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp CAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTCCGCCGTCATCCTGCTaGATCAGGTTCACTTTAATA +
Preference number: 5 (lower is better)
Translates to: QLWPWWSCQVLPKGALIFPPSSC*IRFTLI
Trigger: TATTAAAGTGAACCTGATCAAGCAGGATGACGGCGG...AAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCCGCCTTGGATTTTCCTaGCTGGTTCTCAGCCACCAC +
Preference number: 5 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSRLGFS*LVLSHH
Trigger: GTGGTGGCTGAGAACCAGCAAGGAAAATCCAAGGCG...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTTCCATGTCCTTGCCCTaGGCCCCGGGCCCGGCTTTT +
Preference number: 5 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFSMSLP*APGPAF
Trigger: AAAAGCCGGGCCCGGGGCCAAGGGCAAGGACATGGA...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTCCCTCCTCCATGTCCTaGCCCTTGGCCCCGGGCCCG +
Preference number: 5 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFPSSMS*PLAPGP
Trigger: CGGGCCCGGGGCCAAGGGCAAGGACATGGAGGAGGG...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTCCCTCCTCCATGTCCTaGCCCTTGGCCCCGGGCCCG +
Preference number: 5 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGPSSMS*PLAPGP
Trigger: CGGGCCCGGGGCCAAGGGCAAGGACATGGAGGAGGG...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTTCCACGATGGGCTCCTaGGACTCATCTTTCGAGAAG +
Preference number: 5 (lower is better)
Translates to: VCVRACVCLWCWKCSGEASTMGS*DSSFEK
Trigger: CTTCTCGAAAGATGAGTCCAAGGAGCCCATCGTGGA...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAATCCCTCCATCATGGTTaGGGGTCCTCTCCTCCTCCG +
Preference number: 5 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCESLHHG*GSSPPP
Trigger: CGGAGGAGGAGAGGACCCCAAACCATGATGGAGGGA...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGAGTGGCGTGGTCTCGTaGGGCTCTGTGTGTTTCCCT +
Preference number: 5 (lower is better)
Translates to: NKREGPRSTECWVGMLMESGVVS*GSVCFP
Trigger: AGGGAAACACACAGAGCCCAACGAGACCACGCCACT...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGGTCTGTGTGGCGTCATaGGGGACCGTCTTGACTTCG +
Preference number: 5 (lower is better)
Translates to: NKREGPRSTECWVGMLMEVCVAS*GTVLTS
Trigger: CGAAGTCAAGACGGTCCCCAATGACGCCACACAGAC...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTTGCTCTCGTTCTCCTTaGTCTGTGTGGCGTCATTGG +
Preference number: 5 (lower is better)
Translates to: VCVRACVCLWCWKCSGEACSRSP*SVWRHW
Trigger: CCAATGACGCCACACAGACAAAGGAGAACGAGAGCA...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTTGCTCTCGTTCTCCTTaGTCTGTGTGGCGTCATTGG +
Preference number: 5 (lower is better)
Translates to: CVRACVCLWCWKCSGEAACSRSP*SVWRHW
Trigger: CCAATGACGCCACACAGACAAAGGAGAACGAGAGCA...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GGTGAGAACGCCTGGGAGCAGATCCCTTTTCACAGATGCAGGCAGGTGGCGGCTAGGCTTCGATTCCGTTaGAGTGATTTTTGTTTCCTG +
Preference number: 5 (lower is better)
Translates to: GENAWEQIPFHRCRQVAARLRFR*SDFCFL
Trigger: CAGGAAACAAAAATCACTCAAACGGAATCGAAGCCT...AGCCGCCACCTGCCTGCATCTGTGAAAAGGGATCTGCTCCCAGGCGTTCTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GGTGTGGCAAAGCCATCGACATTACAAGATGAAGAACTGAGTCCACTGAACAGCAGGTATGGCATGGGCTaGGCCTGGTGTGGCAAAGCC +
Preference number: 5 (lower is better)
Translates to: GVAKPSTLQDEELSPLNSRYGMG*AWCGKA
Trigger: GGCTTTGCCACACCAGGCCAAGCCCATGCCATACCT...GCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGAGTTTTGTGGCTGGGTaGAGAGGCACTACCCTGCCT +
Preference number: 5 (lower is better)
Translates to: WSCQVLPKGALIFFIGTGSFVAG*RGTTLP
Trigger: AGGCAGGGTAGTGCCTCTCAACCCAGCCACAAAACT...CCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS TCA 90 bp CACACTTGTAAATGCCGGCGTCGTCGATGTTGGCGTTATAGATGGTaGGGGTGGAGGAGGAATCATCATTCCACACCACTGAGATCCGCT +
Preference number: 5 (lower is better)
Translates to: HTCKCRRRRCWRYRW*GWRRNHHSTPLRSA
Trigger: AGCGGATCTCAGTGGTGTGGAATGATGATTCCTCCTCCACCCTCACCATCTATAACGCCAACATCGACGACGCCGGCATTTACAAGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000525973.5
ENST00000529356.5
ENST00000531044.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS TCA 90 bp ATTGCTGTAATTGGAGCTTGGCAGCAGCTGGCCATCCCGAAACCATaGGATCGTGGCACTGGGATAGGCAAATACCTCGCAGGTGATGTT +
Preference number: 5 (lower is better)
Translates to: IAVIGAWQQLAIPKP*DRGTGIGKYLAGDV
Trigger: AACATCACCTGCGAGGTATTTGCCTATCCCAGTGCCACGATCTCATGGTTTCGGGATGGCCAGCTGCTGCCAAGCTCCAATTACAGCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000531044.5
ENST00000534046.2
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS GCA 90 bp TGCTTGATCAGGTTCACTTTAATAGAGTTTCCATCCTCTCCCATCTaGCCTTCGAGCTTAGGTGCACTGGGTTCCCCTTGGACTGGCTGC +
Preference number: 5 (lower is better)
Translates to: CLIRFTLIEFPSSPI*PSSLGALGSPWTGC
Trigger: GCAGCCAGTCCAAGGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGGAAACTCTATTAAAGTGAACCTGATCAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000611284.4
ENST00000619839.4
ENST00000621128.4
CDS GCA 90 bp TGCTTGATCAGGTTCACTTTAATAGAGTTTCCATCCTCTCCCATCTaGCCTTCGAGCTTAGGTGCACTGGGTTCCCGTGGAGGAGGGCTA +
Preference number: 5 (lower is better)
Translates to: CLIRFTLIEFPSSPI*PSSLGALGSRGGGL
Trigger: TAGCCCTCCTCCACGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGGAAACTCTATTAAAGTGAACCTGATCAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530543.5
CDS GCA 90 bp TGCTTGATCAGGTTCACTTTAATAGAGTTTCCATCCTCTCCCATCTaGCCTTCGAGCTTAGGTGCACTGGGTTCCCCTGCAGTTCCCAGG +
Preference number: 5 (lower is better)
Translates to: CLIRFTLIEFPSSPI*PSSLGALGSPAVPR
Trigger: CCTGGGAACTGCAGGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGGAAACTCTATTAAAGTGAACCTGATCAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620046.4
CDS CCA 90 bp ACACACAATCACGGCATCTTCCCCCTCCCGGAACTCCTGTGGGGTTaGCGCATTCTTGAACATGAGCTTCTGAAAGATCTTCACGTTGAC +
Preference number: 5 (lower is better)
Translates to: THNHGIFPLPELLWG*RILEHELLKDLHVD
Trigger: GTCAACGTGAAGATCTTTCAGAAGCTCATGTTCAAGAATGCGCCAACCCCACAGGAGTTCCGGGAGGGGGAAGATGCCGTGATTGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000525973.5
ENST00000529356.5
ENST00000531044.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CCA 90 bp CACATCACACACAATCACGGCATCTTCCCCCTCCCGGAACTCCTGTaGGGTTGGCGCATTCTTGAACATGAGCTTCTGAAAGATCTTCAC +
Preference number: 5 (lower is better)
Translates to: HITHNHGIFPLPELL*GWRILEHELLKDLH
Trigger: GTGAAGATCTTTCAGAAGCTCATGTTCAAGAATGCGCCAACCCCACAGGAGTTCCGGGAGGGGGAAGATGCCGTGATTGTGTGTGATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000525973.5
ENST00000529356.5
ENST00000531044.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CCA 90 bp TTTCAGGATGACATCTCGGCCTTTGTGTTTCCAGATGATGGTTGGTaGGAGGGAGCTGACCACATCACACACAATCACGGCATCTTCCCC +
Preference number: 5 (lower is better)
Translates to: FQDDISAFVFPDDGW*EGADHITHNHGIFP
Trigger: GGGGAAGATGCCGTGATTGTGTGTGATGTGGTCAGCTCCCTCCCACCAACCATCATCTGGAAACACAAAGGCCGAGATGTCATCCTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000525973.5
ENST00000529356.5
ENST00000531044.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp AGCTCTCCCACACTGACCTGGGATCCTTATGCTCTGCCCTGTGCCCAAAAACCAGAGATGTCTTTATCTTaGGCATCTCCTGCCACTTGG +
Preference number: 5 (lower is better)
Translates to: SSPTLTWDPYALPCAQKPEMSLS*ASPATW
Trigger: CCAAGTGGCAGGAGATGCCAAAGATAAAGACATCTC...TGGTTTTTGGGCACAGGGCAGAGCATAAGGATCCCAGGTCAGTGTGGGAGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CAA 90 bp TGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGTGAGCTTTTCTCCATaGGGGGAGAACCAGGAGATG +
Preference number: 5 (lower is better)
Translates to: WPWWSCQVLPKGALIFFIVSFSP*GENQEM
Trigger: CATCTCCTGGTTCTCCCCCAATGGAGAAAAGCTCAC...TATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp CCCACACTGACCTGGGATCCTTATGCTCTGCCCTGTGCCCAAAAACCATGCCTGATGACATCTCGGCCTTaGTGTTTCCAGATGATGGTT +
Preference number: 5 (lower is better)
Translates to: PTLTWDPYALPCAQKPCLMTSRP*CFQMMV
Trigger: AACCATCATCTGGAAACACAAAGGCCGAGATGTCAT...CAGGCATGGTTTTTGGGCACAGGGCAGAGCATAAGGATCCCAGGTCAGTGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CAA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTCCCTCATCTGTTTTCTaGATGCCCCGGATCTGCAGG +
Preference number: 5 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLPSSVF*MPRICR
Trigger: CCTGCAGATCCGGGGCATCAAGAAAACAGATGAGGG...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp AACATAGGTGGCTTTGCCCCTCAGACCACAGCATGGGATCATTTGGAATCCCAACCCTCATCTGTTTTCTaGATGCCCCGGATCTGCAGG +
Preference number: 5 (lower is better)
Translates to: NIGGFAPQTTAWDHLESQPSSVF*MPRICR
Trigger: CCTGCAGATCCGGGGCATCAAGAAAACAGATGAGGG...TTGGGATTCCAAATGATCCCATGCTGTGGTCTGAGGGGCAAAGCCACCTATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CAA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTACGGACTGGCCGAGGTaGGCGGTGGCATTCACAATA +
Preference number: 5 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFTDWPR*AVAFTI
Trigger: TATTGTGAATGCCACCGCCAACCTCGGCCAGTCCGT...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTCTGTTCCCCATCCTTaGTCCAGCTCATGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLSVPHP*SSSWWA
Trigger: AGCCCACCATGAGCTGGACAAAGGATGGGGAACAGA...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTGGTTTTGCAAAGACTTaGAGGTGGATGGTCGCATCC +
Preference number: 5 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAGFAKT*RWMVAS
Trigger: GGATGCGACCATCCACCTCAAAGTCTTTGCAAAACC...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATCCTGGCCGATGGTGTaGCTGGCGGTGCAGATGTAC +
Preference number: 5 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLSWPMV*LAVQMY
Trigger: GTACATCTGCACCGCCAGCAACACCATCGGCCAGGA...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GGCTGGGGCATTCAGGAAGCACTGACAGGTTGGCTCGGCCCCAATTTATTAACCAGAGGGGGTGTCTGCTaGAACAAGGATGAATTCCAA +
Preference number: 5 (lower is better)
Translates to: GWGIQEALTGWLGPNLLTRGGVC*NKDEFQ
Trigger: TTGGAATTCATCCTTGTTCAAGCAGACACCCCCTCT...GGTTAATAAATTGGGGCCGAGCCAACCTGTCAGTGCTTCCTGAATGCCCCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CAA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTCACTCAGCTTTGTATTaGAGGATGGGCACCCCACCT +
Preference number: 5 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWAHSALY*RMGTPP
Trigger: AGGTGGGGTGCCCATCCTCAAATACAAAGCTGAGTG...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp CCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAGCTCTCCACTCAGCTTaGTATTTGAGGATGGGCACC +
Preference number: 5 (lower is better)
Translates to: PWWSCQVLPKGALIFFIGALHSA*YLRMGT
Trigger: GGTGCCCATCCTCAAATACAAAGCTGAGTGGAGAGC...TCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTGCTCTCCACTCAGCTTaGTATTTGAGGATGGGCACC +
Preference number: 5 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWAALHSA*YLRMGT
Trigger: GGTGCCCATCCTCAAATACAAAGCTGAGTGGAGAGC...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTTCCATGCTGGCTTCCTaGGCATCATACCACTTGGAA +
Preference number: 5 (lower is better)
Translates to: CVRACVCLWCWKCSGEAASMLAS*ASYHLE
Trigger: TTCCAAGTGGTATGATGCCAAGGAAGCCAGCATGGA...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGCCTTACGGCGTACGTaGTTTCGGGCTTCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSALRRT*FRASGP
Trigger: TGGGCCTGAAGCCCGAAACAACGTACGCCGTAAGGC...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAATGCACTGGGTTCCCCTaGGACTGGCTGCGTCTTGAA +
Preference number: 5 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCECTGFP*DWLRLE
Trigger: TTCAAGACGCAGCCAGTCCAAGGGGAACCCAGTGCA...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316851.12
CDS-3UTR CAA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTCGCCTTGGATTTTCCTaGCTGGTTCTCAGCCACCAC +
Preference number: 5 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLRLGFS*LVLSHH
Trigger: GTGGTGGCTGAGAACCAGCAAGGAAAATCCAAGGCG...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000401611.6
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTGCTTTTCCACACAGGTaGACCGCAATGCACATGAAC +
Preference number: 5 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAAFPHR*TAMHMN
Trigger: GTTCATGTGCATTGCGGTCAACCTGTGTGGAAAAGC...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCCCCTCCTCCATGTCCTaGCCCTTGGCCCCGGGCCCG +
Preference number: 5 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFIPSSMS*PLAPGP
Trigger: CGGGCCCGGGGCCAAGGGCAAGGACATGGAGGAGGG...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTTTCGAGAAGGCGGCCTaGCCCTCCTCCATGTCCTTG +
Preference number: 5 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSFEKAA*PSSMSL
Trigger: CAAGGACATGGAGGAGGGCAAGGCCGCCTTCTCGAA...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCTCCACGATGGGCTCCTaGGACTCATCTTTCGAGAAG +
Preference number: 5 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSSTMGS*DSSFEK
Trigger: CTTCTCGAAAGATGAGTCCAAGGAGCCCATCGTGGA...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAAAGTGGCGTGGTCTCGTaGGGCTCTGTGTGTTTCCCT +
Preference number: 5 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCESGVVS*GSVCFP
Trigger: AGGGAAACACACAGAGCCCAACGAGACCACGCCACT...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAAGTCTGTGTGGCGTCATaGGGGACCGTCTTGACTTCG +
Preference number: 5 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCEVCVAS*GTVLTS
Trigger: CGAAGTCAAGACGGTCCCCAATGACGCCACACAGAC...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCTGCTCTCGTTCTCCTTaGTCTGTGTGGCGTCATTGG +
Preference number: 5 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSCSRSP*SVWRHW
Trigger: CCAATGACGCCACACAGACAAAGGAGAACGAGAGCA...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTACCACTTTGACAGTCTaGACAAGGTATGGCATGGGC +
Preference number: 5 (lower is better)
Translates to: CVRACVCLWCWKCSGEAATTLTV*TRYGMG
Trigger: GCCCATGCCATACCTTGTCAAGACTGTCAAAGTGGT...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GGTGTGGCAAAGCCATCGACATTACAAGATGAAGAACTGAGTCCACTGAACAGCCTCCTCCAGCAGAACTaGGCCATGCCGGTCTTCATG +
Preference number: 5 (lower is better)
Translates to: GVAKPSTLQDEELSPLNSLLQQN*AMPVFM
Trigger: CATGAAGACCGGCATGGCCAAGTTCTGCTGGAGGAG...GCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GGTGTGGCAAAGCCATCGACATTACAAGATGAAGAACTGAGTCCACTGAACAGCCCCTGCTCGTCACACTaGAGTGCTCCTCCAGCAGAA +
Preference number: 5 (lower is better)
Translates to: GVAKPSTLQDEELSPLNSPCSSH*SAPPAE
Trigger: TTCTGCTGGAGGAGCACTCAAGTGTGACGAGCAGGG...GCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAACCCTGCTCGTCACACTaGAGTGCTCCTCCAGCAGAA +
Preference number: 5 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCEPCSSH*SAPPAE
Trigger: TTCTGCTGGAGGAGCACTCAAGTGTGACGAGCAGGG...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCAGCCGGTACAGAGTTaGAGTCAGGCGTGGCCGTGG +
Preference number: 5 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFQPVQS*SQAWPW
Trigger: CCACGGCCACGCCTGACTCAAACTCTGTACCGGCTG...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR CAA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGTCCGGGTCCGGGCCTTaGGTGCTGGGAGCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLSGSGP*VLGASC
Trigger: GCAGGAGGCTCCCAGCACCAAAGGCCCGGACCCGGA...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR CAA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACAAGCAAGCTCAGGGGCTaGTCCACTGGCCCCAGCGGC +
Preference number: 5 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTSKLRG*STGPSG
Trigger: GCCGCTGGGGCCAGTGGACAAGCCCCTGAGCTTGCT...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR CAA 90 bp GTCCTCTCCACACTTAGGACGAGATCTCCAAAGGGTCCCTTCAGAAAGATGGACTTCCACACAGAATGGTaGCTCAGCAGCTGTGGCCAT +
Preference number: 5 (lower is better)
Translates to: VLSTLRTRSPKGPFRKMDFHTEW*LSSCGH
Trigger: ATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAA...GTCCATCTTTCTGAAGGGACCCTTTGGAGATCTCGTCCTAAGTGTGGAGAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS GCA 90 bp GTGATTTTGGGTTTTGCAAAGACTTTGAGGTGGATGGTCGCATCCTaGTCGCCAGCCTTGTTCTCAGCAATGCAGATGTACTCAGCCTCG +
Preference number: 5 (lower is better)
Translates to: VILGFAKTLRWMVAS*SPALFSAMQMYSAS
Trigger: CGAGGCTGAGTACATCTGCATTGCTGAGAACAAGGCTGGCGAGCAGGATGCGACCATCCACCTCAAAGTCTTTGCAAAACCCAAAATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000529356.5
ENST00000531044.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS GCA 90 bp TTTAATAGAGTTTCCATCCTCTCCCATCTGCCCTTCGAGCTTAGGTaGACTGGGTTCCCCTTCTGTTCACCAGCGTGGACGACATCATCA +
Preference number: 5 (lower is better)
Translates to: FNRVSILSHLPFELR*TGFPFCSPAWTTSS
Trigger: TGATGATGTCGTCCACGCTGGTGAACAGAAGGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGGAAACTCTATTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534516.2
CDS CCA 90 bp ACTTGGCATAAGAAGAATTTGGACTCTCCAACGCTGATCTCCCCCTaGCTGGGAACAATATCCACCTGCAGAGAAACTGCAGTTCCCAGG +
Preference number: 5 (lower is better)
Translates to: TWHKKNLDSPTLISP*LGTISTCRETAVPR
Trigger: CCTGGGAACTGCAGTTTCTCTGCAGGTGGATATTGTTCCCAGCCAGGGGGAGATCAGCGTTGGAGAGTCCAAATTCTTCTTATGCCAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000529356.5
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTGAGATGTCTTTATCTTaGGCATCTCCTGCCACTTGG +
Preference number: 5 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAEMSLS*ASPATW
Trigger: CCAAGTGGCAGGAGATGCCAAAGATAAAGACATCTC...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTGTGAGCTTTTCTCCATaGGGGGAGAACCAGGAGATG +
Preference number: 5 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLVSFSP*GENQEM
Trigger: CATCTCCTGGTTCTCCCCCAATGGAGAAAAGCTCAC...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp CAGACACCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTACGGACTGGCCGAGGTaGGCGGTGGCATTCACAATA +
Preference number: 5 (lower is better)
Translates to: QTPRLSHSTVCSKISLHVTDWPR*AVAFTI
Trigger: TATTGTGAATGCCACCGCCAACCTCGGCCAGTCCGT...AACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGGTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTACGGACTGGCCGAGGTaGGCGGTGGCATTCACAATA +
Preference number: 5 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSTDWPR*AVAFTI
Trigger: TATTGTGAATGCCACCGCCAACCTCGGCCAGTCCGT...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTTCTGTTCCCCATCCTTaGTCCAGCTCATGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFSVPHP*SSSWWA
Trigger: AGCCCACCATGAGCTGGACAAAGGATGGGGAACAGA...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp GAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGTTCTTATCCACCTTTTaGATGGTCAGCTGGGAACTA +
Preference number: 5 (lower is better)
Translates to: EWLLSSCGHGGPARFFQRFLSTF*MVSWEL
Trigger: TAGTTCCCAGCTGACCATCAAAAAGGTGGATAAGAA...CCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp AATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGTTCTTATCCACCTTTTaGATGGTCAGCTGGGAACTA +
Preference number: 5 (lower is better)
Translates to: NGCSAAVAMVVLPGSSKGFLSTF*MVSWEL
Trigger: TAGTTCCCAGCTGACCATCAAAAAGGTGGATAAGAA...CCCTTTGGAAGAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTTCCTGCTCGCCAGCCTaGTTCTCAGCAATGCAGATG +
Preference number: 5 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFSCSPA*FSAMQM
Trigger: CATCTGCATTGCTGAGAACAAGGCTGGCGAGCAGGA...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTGGTTTTGCAAAGACTTaGAGGTGGATGGTCGCATCC +
Preference number: 5 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWAGFAKT*RWMVAS
Trigger: GGATGCGACCATCCACCTCAAAGTCTTTGCAAAACC...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTTCCTGGCCGATGGTGTaGCTGGCGGTGCAGATGTAC +
Preference number: 5 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFSWPMV*LAVQMY
Trigger: GTACATCTGCACCGCCAGCAACACCATCGGCCAGGA...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTCAGGGCCCTGTAGCTTaGGGGCATATTGCACTTCAA +
Preference number: 5 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLQGPVA*GHIALQ
Trigger: TTGAAGTGCAATATGCCCCAAAGCTACAGGGCCCTG...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp AGTTGCCCATCATGTCAGCAAAACGCTCATGTGAATCAGTGCGGTCTGGCTCTTCAGGGCCCTGTAGCTTaGGGGCATATTGCACTTCAA +
Preference number: 5 (lower is better)
Translates to: SCPSCQQNAHVNQCGLALQGPVA*GHIALQ
Trigger: TTGAAGTGCAATATGCCCCAAAGCTACAGGGCCCTG...AAGAGCCAGACCGCACTGATTCACATGAGCGTTTTGCTGACATGATGGGCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CAA 90 bp CAGACACCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTTGCTGTAATTGGAGCTaGGCAGCAGCTGGCCATCCC +
Preference number: 5 (lower is better)
Translates to: QTPRLSHSTVCSKISLHVCCNWS*AAAGHP
Trigger: GGGATGGCCAGCTGCTGCCAAGCTCCAATTACAGCA...AACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGGTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATGCTGTAATTGGAGCTaGGCAGCAGCTGGCCATCCC +
Preference number: 5 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLCCNWS*AAAGHP
Trigger: GGGATGGCCAGCTGCTGCCAAGCTCCAATTACAGCA...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTAGAGGGGGTGTCTGCTaGAACAAGGATGAATTCCAA +
Preference number: 5 (lower is better)
Translates to: CVRACVCLWCWKCSGEAARGGVC*NKDEFQ
Trigger: TTGGAATTCATCCTTGTTCAAGCAGACACCCCCTCT...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTGCTCTCCACTCAGCTTaGTATTTGAGGATGGGCACC +
Preference number: 5 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLALHSA*YLRMGT
Trigger: GGTGCCCATCCTCAAATACAAAGCTGAGTGGAGAGC...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp TTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTCTTGGCATCATACCACTaGGAATGCCATACTTCTTCA +
Preference number: 5 (lower is better)
Translates to: FHTEWLLSSCGHGGPARFLASYH*ECHTSS
Trigger: TGAAGAAGTATGGCATTCCAAGTGGTATGATGCCAA...GAACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp TCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGCCAGGTTTGGCATCATACCACTaGGAATGCCATACTTCTTCA +
Preference number: 5 (lower is better)
Translates to: SSTQNGCSAAVAMVVLPGLASYH*ECHTSS
Trigger: TGAAGAAGTATGGCATTCCAAGTGGTATGATGCCAA...ACCTGGCAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTCCATGCTGGCTTCCTaGGCATCATACCACTTGGAA +
Preference number: 5 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWASMLAS*ASYHLE
Trigger: TTCCAAGTGGTATGATGCCAAGGAAGCCAGCATGGA...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTGCCTTACGGCGTACGTaGTTTCGGGCTTCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELALRRT*FRASGP
Trigger: TGGGCCTGAAGCCCGAAACAACGTACGCCGTAAGGC...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GGGAGTTTTTATTCAGTAGAAGGTCCATCCCCAAGCACACACACTGATATTACCGCCTTACGGCGTACGTaGTTTCGGGCTTCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: GSFYSVEGPSPSTHTDITALRRT*FRASGP
Trigger: TGGGCCTGAAGCCCGAAACAACGTACGCCGTAAGGC...GGTAATATCAGTGTGTGTGCTTGGGGATGGACCTTCTACTGAATAAAAACTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CAA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTCCGCCGTCATCCTGCTaGATCAGGTTCACTTTAATA +
Preference number: 5 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAPPSSC*IRFTLI
Trigger: TATTAAAGTGAACCTGATCAAGCAGGATGACGGCGG...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTCGCCTTGGATTTTCCTaGCTGGTTCTCAGCCACCAC +
Preference number: 5 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFRLGFS*LVLSHH
Trigger: GTGGTGGCTGAGAACCAGCAAGGAAAATCCAAGGCG...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000401611.6
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp ACGAGGACTGAAAGCACATCCCAGAACGTTCATCAGCCCCAGAAAATATCCAACCGCCTTGGATTTTCCTaGCTGGTTCTCAGCCACCAC +
Preference number: 5 (lower is better)
Translates to: TRTESTSQNVHQPQKISNRLGFS*LVLSHH
Trigger: GTGGTGGCTGAGAACCAGCAAGGAAAATCCAAGGCG...GTTGGATATTTTCTGGGGCTGATGAACGTTCTGGGATGTGCTTTCAGTCCTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CAA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACATCCATGTCCTTGCCCTaGGCCCCGGGCCCGGCTTTT +
Preference number: 5 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTSMSLP*APGPAF
Trigger: AAAAGCCGGGCCCGGGGCCAAGGGCAAGGACATGGA...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAACCCTCCTCCATGTCCTaGCCCTTGGCCCCGGGCCCG +
Preference number: 5 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKPSSMS*PLAPGP
Trigger: CGGGCCCGGGGCCAAGGGCAAGGACATGGAGGAGGG...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTTTCGAGAAGGCGGCCTaGCCCTCCTCCATGTCCTTG +
Preference number: 5 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPFEKAA*PSSMSL
Trigger: CAAGGACATGGAGGAGGGCAAGGCCGCCTTCTCGAA...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATTTCGAGAAGGCGGCCTaGCCCTCCTCCATGTCCTTG +
Preference number: 5 (lower is better)
Translates to: PGSHILLCALRSLFMFLYFEKAA*PSSMSL
Trigger: CAAGGACATGGAGGAGGGCAAGGCCGCCTTCTCGAA...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTTCCCTCCATCATGGTTaGGGGTCCTCTCCTCCTCCG +
Preference number: 5 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELSLHHG*GSSPPP
Trigger: CGGAGGAGGAGAGGACCCCAAACCATGATGGAGGGA...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGTGCTCTCGTTCTCCTTaGTCTGTGTGGCGTCATTGG +
Preference number: 5 (lower is better)
Translates to: NKREGPRSTECWVGMLMECSRSP*SVWRHW
Trigger: CCAATGACGCCACACAGACAAAGGAGAACGAGAGCA...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTTTCACCCATCATGCTTaGCTCTCGTTCTCCTTTGTC +
Preference number: 5 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAFTHHA*LSFSFV
Trigger: GACAAAGGAGAACGAGAGCAAAGCATGATGGGTGAA...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTACGGAGTGTCCTAGTTaGGCTGTGGGTTTAACCTTT +
Preference number: 5 (lower is better)
Translates to: CVRACVCLWCWKCSGEAATECPS*AVGLTF
Trigger: AAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTCCCTGCTCGTCACACTaGAGTGCTCCTCCAGCAGAA +
Preference number: 5 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSPCSSH*SAPPAE
Trigger: TTCTGCTGGAGGAGCACTCAAGTGTGACGAGCAGGG...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTCGGACTGGCTGCGTCTaGAACTCGGAGGCCGCGCTG +
Preference number: 5 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFRTGCV*NSEAAL
Trigger: CAGCGCGGCCTCCGAGTTCAAGACGCAGCCAGTCCG...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533073.5
CDS-3UTR CAA 90 bp GGGGAGCCGCCGTCATCCTGCTTGATCAGGTTCACTTTAATAGAGTTTCCATCCCAGGAAGAGGCCAAGTaGTATCTGGTGGAGACAATG +
Preference number: 5 (lower is better)
Translates to: GEPPSSCLIRFTLIEFPSQEEAK*YLVETM
Trigger: CATTGTCTCCACCAGATACAACTTGGCCTCTTCCTG...GGATGGAAACTCTATTAAAGTGAACCTGATCAAGCAGGATGACGGCGGCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR CAA 90 bp TGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTTTCCACACAGAATGGTaGCTCAGCAGCTGTGGCCAT +
Preference number: 5 (lower is better)
Translates to: WWSCQVLPKGALIFFIGTFHTEW*LSSCGH
Trigger: ATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAA...AGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000524916.1
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTAGTTTTGTGGCTGGGTaGAGAGGCACTACCCTGCCT +
Preference number: 5 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFSFVAG*RGTTLP
Trigger: AGGCAGGGTAGTGCCTCTCAACCCAGCCACAAAACT...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CAA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTTGGCCCGGGTTCGTTTaGATGGAACTGGGATGGGAG +
Preference number: 5 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSWPGFV*MELGWE
Trigger: CTCCCATCCCAGTTCCATCAAAACGAACCCGGGCCA...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGGGGACTGGCTGCGTCTaGAACTCGGAGGCCGCGCTG +
Preference number: 5 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLGTGCV*NSEAAL
Trigger: CAGCGCGGCCTCCGAGTTCAAGACGCAGCCAGTCCC...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS TCA 90 bp CTTGAACATGAGCTTCTGAAAGATCTTCACGTTGACGGTGGCCTCTaGCTCACTGCCATCCTCGCCTGTAACCACACACTTGTAAATGCC +
Preference number: 5 (lower is better)
Translates to: LEHELLKDLHVDGGL*LTAILACNHTLVNA
Trigger: GGCATTTACAAGTGTGTGGTTACAGGCGAGGATGGCAGTGAGTCAGAGGCCACCGTCAACGTGAAGATCTTTCAGAAGCTCATGTTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000525973.5
ENST00000529356.5
ENST00000531044.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS TCA 90 bp AATGCCATACTTCTTCACCAACTGCTCTCCACTCAGCTTTGTATTTaGGGATGGGCACCCCACCTGTGGCCTCTGGTTCATCAAACTGCA +
Preference number: 5 (lower is better)
Translates to: NAILLHQLLSTQLCI*GWAPHLWPLVHQTA
Trigger: TGCAGTTTGATGAACCAGAGGCCACAGGTGGGGTGCCCATCCTCAAATACAAAGCTGAGTGGAGAGCAGTTGGTGAAGAAGTATGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000526322.5
ENST00000528590.5
ENST00000530543.5
ENST00000531044.5
ENST00000531817.5
ENST00000533073.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS GCA 90 bp TGCTTGATCAGGTTCACTTTAATAGAGTTTCCATCCTCTCCCATCTaGCCTTCGAGCTTAGGTGCACTGGGTTCCCTAGCTGGTTCTGTG +
Preference number: 5 (lower is better)
Translates to: CLIRFTLIEFPSSPI*PSSLGALGSLAGSV
Trigger: CACAGAACCAGCTAGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGGAAACTCTATTAAAGTGAACCTGATCAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526322.5
CDS GCA 90 bp TGCTTGATCAGGTTCACTTTAATAGAGTTTCCATCCTCTCCCATCTaGCCTTCGAGCTTAGGTGCACTGGGTTCCCCTTCTGTTCACCAG +
Preference number: 5 (lower is better)
Translates to: CLIRFTLIEFPSSPI*PSSLGALGSPSVHQ
Trigger: CTGGTGAACAGAAGGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGGAAACTCTATTAAAGTGAACCTGATCAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534516.2
CDS CCA 90 bp AGGAGAGCCCAGGGCTGCAAAAACATCCTTTGCAAGGTCAATATCTaGGGTCTTGAAGTTCCCTTCGTCCATTTTAAAGTCCTCGCCCTG +
Preference number: 5 (lower is better)
Translates to: RRAQGCKNILCKVNI*GLEVPFVHFKVLAL
Trigger: CAGGGCGAGGACTTTAAAATGGACGAAGGGAACTTCAAGACCCCAGATATTGACCTTGCAAAGGATGTTTTTGCAGCCCTGGGCTCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS CCA 90 bp AGGTACCATCTAATGGGGGAGGCACTGGGAAGCAGCATGAGAACCTaGGAGTATCCGAAACAGAAAATGAGACTCAGTTATGTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: RYHLMGEALGSSMRT*EYPKQKMRLSYVRQ
Trigger: CTGCCTGACATAACTGAGTCTCATTTTCTGTTTCGGATACTCCCAGGTTCTCATGCTGCTTCCCAGTGCCTCCCCCATTAGATGGTACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534046.2
CDS-3UTR CAA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTATTATTTTTGCAGAATaGTTTCCTGCCAGCGGCAGC +
Preference number: 5 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAIIFAE*FPASGS
Trigger: GCTGCCGCTGGCAGGAAACAATTCTGCAAAAATAAT...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTTGGCATAAGAAGAATTaGGACTCTCCAACGCTGATC +
Preference number: 5 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAWHKKN*DSPTLI
Trigger: GATCAGCGTTGGAGAGTCCAAATTCTTCTTATGCCA...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTATGACATCTCGGCCTTaGTGTTTCCAGATGATGGTT +
Preference number: 5 (lower is better)
Translates to: VCVRACVCLWCWKCSGEAMTSRP*CFQMMV
Trigger: AACCATCATCTGGAAACACAAAGGCCGAGATGTCAT...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GGGAGTTTTTATTCAGTAGAAGGTCCATCCCCAAGCACACACACTGATATTACCACGGACTGGCCGAGGTaGGCGGTGGCATTCACAATA +
Preference number: 5 (lower is better)
Translates to: GSFYSVEGPSPSTHTDITTDWPR*AVAFTI
Trigger: TATTGTGAATGCCACCGCCAACCTCGGCCAGTCCGT...GGTAATATCAGTGTGTGTGCTTGGGGATGGACCTTCTACTGAATAAAAACTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CAA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATCTGTTCCCCATCCTTaGTCCAGCTCATGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLSVPHP*SSSWWA
Trigger: AGCCCACCATGAGCTGGACAAAGGATGGGGAACAGA...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATCCTGCTCGCCAGCCTaGTTCTCAGCAATGCAGATG +
Preference number: 5 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLSCSPA*FSAMQM
Trigger: CATCTGCATTGCTGAGAACAAGGCTGGCGAGCAGGA...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GGGAGTTTTTATTCAGTAGAAGGTCCATCCCCAAGCACACACACTGATATTACCTGCTGTAATTGGAGCTaGGCAGCAGCTGGCCATCCC +
Preference number: 5 (lower is better)
Translates to: GSFYSVEGPSPSTHTDITCCNWS*AAAGHP
Trigger: GGGATGGCCAGCTGCTGCCAAGCTCCAATTACAGCA...GGTAATATCAGTGTGTGTGCTTGGGGATGGACCTTCTACTGAATAAAAACTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CAA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCAGAGGGGGTGTCTGCTaGAACAAGGATGAATTCCAA +
Preference number: 5 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSRGGVC*NKDEFQ
Trigger: TTGGAATTCATCCTTGTTCAAGCAGACACCCCCTCT...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTAGAGGGGGTGTCTGCTaGAACAAGGATGAATTCCAA +
Preference number: 5 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWARGGVC*NKDEFQ
Trigger: TTGGAATTCATCCTTGTTCAAGCAGACACCCCCTCT...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp CAGTGCGGTCTGGCTCTTTTAACATGGGCACTTAAATGCTTAATTGCAAGCAAAGCCTTACGGCGTACGTaGTTTCGGGCTTCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: QCGLALLTWALKCLIASKALRRT*FRASGP
Trigger: TGGGCCTGAAGCCCGAAACAACGTACGCCGTAAGGC...TTTGCTTGCAATTAAGCATTTAAGTGCCCATGTTAAAAGAGCCAGACCGCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CAA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACAATCTCACCCAGCCCTTaGCCATTGAGCGCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTISPSP*PLSAAS
Trigger: GCTGGCGGCGCTCAATGGCAAAGGGCTGGGTGAGAT...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTTGGACTGGCTGCGTCTaGAACTCGGAGGCCGCGCTG +
Preference number: 5 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFWTGCV*NSEAAL
Trigger: CAGCGCGGCCTCCGAGTTCAAGACGCAGCCAGTCCA...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000316851.12
CDS-3UTR CAA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGGCTTTTCCACACAGGTaGACCGCAATGCACATGAAC +
Preference number: 5 (lower is better)
Translates to: NKREGPRSTECWVGMLMEAFPHR*TAMHMN
Trigger: GTTCATGTGCATTGCGGTCAACCTGTGTGGAAAAGC...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTAGTGGCGTGGTCTCGTaGGGCTCTGTGTGTTTCCCT +
Preference number: 5 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPSGVVS*GSVCFP
Trigger: AGGGAAACACACAGAGCCCAACGAGACCACGCCACT...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATGTCTGTGTGGCGTCATaGGGGACCGTCTTGACTTCG +
Preference number: 5 (lower is better)
Translates to: PGSHILLCALRSLFMFLYVCVAS*GTVLTS
Trigger: CGAAGTCAAGACGGTCCCCAATGACGCCACACAGAC...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTCTCCTCCAGCAGAACTaGGCCATGCCGGTCTTCATG +
Preference number: 5 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELLLQQN*AMPVFM
Trigger: CATGAAGACCGGCATGGCCAAGTTCTGCTGGAGGAG...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTCTGCAAAAACATCCTTaGCAAGGTCAATATCTGGGG +
Preference number: 5 (lower is better)
Translates to: VCVRACVCLWCWKCSGEALQKHP*QGQYLG
Trigger: CCCCAGATATTGACCTTGCAAAGGATGTTTTTGCAG...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR CAA 90 bp ACCTTCTCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCCTGATTATGAAGACCAGCTaGGAACATGTTACAGCAGTG +
Preference number: 5 (lower is better)
Translates to: TFSSTQNGCSAAVAMVVLIMKTS*EHVTAV
Trigger: CACTGCTGTAACATGTTCCAAGCTGGTCTTCATAAT...CAGGACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGAGAAGGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR CAA 90 bp AGGGAGGACAAGGAGCACAGAGTTAGAATGAGGGGAATGTGTGGTGATTTTAACTTGGCACATCATGGCTaGGCCCCGTTCACAGAGACA +
Preference number: 5 (lower is better)
Translates to: REDKEHRVRMRGMCGDFNLAHHG*APFTET
Trigger: TGTCTCTGTGAACGGGGCCAAGCCATGATGTGCCAA...GTTAAAATCACCACACATTCCCCTCATTCTAACTCTGTGCTCCTTGTCCTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CAA 90 bp TGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGACAGCATGGGATCATTaGGAATCCCAAAGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: WSCQVLPKGALIFFIGTGTAWDH*ESQRER
Trigger: CCTTTCCCTTTGGGATTCCAAATGATCCCATGCTGT...CCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS TCA 90 bp CTGTTCACCAGCGTGGACGACATCATCAGCACCATGCAAGCCACATaGCAAAGTCACATGATACGCACGCACATGATATTGGTTGAAAGG +
Preference number: 5 (lower is better)
Translates to: LFTSVDDIISTMQAT*QSHMIRTHMILVER
Trigger: CCTTTCAACCAATATCATGTGCGTGCGTATCATGTGACTTTGTCATGTGGCTTGCATGGTGCTGATGATGTCGTCCACGCTGGTGAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534516.2
CDS GCA 90 bp TTCCTTGGCATCATACCACTTGGAATGCCATACTTCTTCACCAACTaGTCTCCACTCAGCTTTGTATTTGAGGATGGGCACCCCACCTGT +
Preference number: 5 (lower is better)
Translates to: FLGIIPLGMPYFFTN*SPLSFVFEDGHPTC
Trigger: ACAGGTGGGGTGCCCATCCTCAAATACAAAGCTGAGTGGAGAGCAGTTGGTGAAGAAGTATGGCATTCCAAGTGGTATGATGCCAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000526322.5
ENST00000528590.5
ENST00000530543.5
ENST00000531044.5
ENST00000531817.5
ENST00000533073.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS GCA 90 bp ACGATGCCCTCCATGCTGGCTTCCTTGGCATCATACCACTTGGAATaGCATACTTCTTCACCAACTGCTCTCCACTCAGCTTTGTATTTG +
Preference number: 5 (lower is better)
Translates to: TMPSMLASLASYHLE*HTSSPTALHSALYL
Trigger: CAAATACAAAGCTGAGTGGAGAGCAGTTGGTGAAGAAGTATGGCATTCCAAGTGGTATGATGCCAAGGAAGCCAGCATGGAGGGCATCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000526322.5
ENST00000528590.5
ENST00000530543.5
ENST00000531044.5
ENST00000531817.5
ENST00000533073.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS GCA 90 bp TGCTTGATCAGGTTCACTTTAATAGAGTTTCCATCCTCTCCCATCTaGCCTTCGAGCTTAGGTGCACTGGGTTCCCCTTTATCTGGTGGA +
Preference number: 5 (lower is better)
Translates to: CLIRFTLIEFPSSPI*PSSLGALGSPLSGG
Trigger: TCCACCAGATAAAGGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGGAAACTCTATTAAAGTGAACCTGATCAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525691.5
ENST00000528590.5
CDS GCA 90 bp TGCTTGATCAGGTTCACTTTAATAGAGTTTCCATCCTCTCCCATCTaGCCTTCGAGCTTAGGTGCACTGGGTTCCCCTTTAGCTGGTTCT +
Preference number: 5 (lower is better)
Translates to: CLIRFTLIEFPSSPI*PSSLGALGSPLAGS
Trigger: AGAACCAGCTAAAGGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGGAAACTCTATTAAAGTGAACCTGATCAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621850.4
CDS CCA 90 bp ATTCCTCCCTCAACAATGCAGGACAACAGCAGGGCTGTCTGGGTATaGGTTCCTCTTCTTGTAATACCTTCTCCTGAACCTGAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: IPPSTMQDNSRAVWV*VPLLVIPSPEPEKR
Trigger: TCTCTTCTCAGGTTCAGGAGAAGGTATTACAAGAAGAGGAACCCATACCCAGACAGCCCTGCTGTTGTCCTGCATTGTTGAGGGAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611284.4
CDS CCA 90 bp GACATAATTCCTCCCTCAACAATGCAGGACAACAGCAGGGCTGTCTaGGTATGGGTTCCTCTTCTTGTAATACCTTCTCCTGAACCTGAG +
Preference number: 5 (lower is better)
Translates to: DIIPPSTMQDNSRAV*VWVPLLVIPSPEPE
Trigger: CTCAGGTTCAGGAGAAGGTATTACAAGAAGAGGAACCCATACCCAGACAGCCCTGCTGTTGTCCTGCATTGTTGAGGGAGGAATTATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611284.4
CDS-3UTR CAA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTATTATTTTTGCAGAATaGTTTCCTGCCAGCGGCAGC +
Preference number: 5 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWAIIFAE*FPASGS
Trigger: GCTGCCGCTGGCAGGAAACAATTCTGCAAAAATAAT...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CAA 90 bp GTGTGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGATGAGATCCTTAGTTaGCAGCATTGTAATCTGCTG +
Preference number: 5 (lower is better)
Translates to: VCVRACVCLWCWKCSGEADEILS*QHCNLL
Trigger: CAGCAGATTACAATGCTGCAAACTAAGGATCTCATC...AGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTGGCATAAGAAGAATTaGGACTCTCCAACGCTGATC +
Preference number: 5 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWAWHKKN*DSPTLI
Trigger: GATCAGCGTTGGAGAGTCCAAATTCTTCTTATGCCA...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCTGGCATAAGAAGAATTaGGACTCTCCAACGCTGATC +
Preference number: 5 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSWHKKN*DSPTLI
Trigger: GATCAGCGTTGGAGAGTCCAAATTCTTCTTATGCCA...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AAAACCTTCTCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCTGGCATAAGAAGAATTaGGACTCTCCAACGCTGATC +
Preference number: 5 (lower is better)
Translates to: KTFSSTQNGCSAAVAMVVWHKKN*DSPTLI
Trigger: GATCAGCGTTGGAGAGTCCAAATTCTTCTTATGCCA...GACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGAGAAGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTGAGATGTCTTTATCTTaGGCATCTCCTGCCACTTGG +
Preference number: 5 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLEMSLS*ASPATW
Trigger: CCAAGTGGCAGGAGATGCCAAAGATAAAGACATCTC...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGGAGATGTCTTTATCTTaGGCATCTCCTGCCACTTGG +
Preference number: 5 (lower is better)
Translates to: NKREGPRSTECWVGMLMEEMSLS*ASPATW
Trigger: CCAAGTGGCAGGAGATGCCAAAGATAAAGACATCTC...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGAGATGTCTTTATCTTaGGCATCTCCTGCCACTTGG +
Preference number: 5 (lower is better)
Translates to: WWSCQVLPKGALIFFIGTEMSLS*ASPATW
Trigger: CCAAGTGGCAGGAGATGCCAAAGATAAAGACATCTC...AGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp CAGACACCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTGTGAGCTTTTCTCCATaGGGGGAGAACCAGGAGATG +
Preference number: 5 (lower is better)
Translates to: QTPRLSHSTVCSKISLHVVSFSP*GENQEM
Trigger: CATCTCCTGGTTCTCCCCCAATGGAGAAAAGCTCAC...AACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGGTGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTATGACATCTCGGCCTTaGTGTTTCCAGATGATGGTT +
Preference number: 5 (lower is better)
Translates to: VLPGSSKGGTDLFHRNWAMTSRP*CFQMMV
Trigger: AACCATCATCTGGAAACACAAAGGCCGAGATGTCAT...AGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp TGGCCATGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAATGACATCTCGGCCTTaGTGTTTCCAGATGATGGTT +
Preference number: 5 (lower is better)
Translates to: WPWWSCQVLPKGALIFFIMTSRP*CFQMMV
Trigger: AACCATCATCTGGAAACACAAAGGCCGAGATGTCAT...TATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCATGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCCCTCATCTGTTTTCTaGATGCCCCGGATCTGCAGG +
Preference number: 5 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFPSSVF*MPRICR
Trigger: CCTGCAGATCCGGGGCATCAAGAAAACAGATGAGGG...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTTTCTTATCCACCTTTTaGATGGTCAGCTGGGAACTA +
Preference number: 5 (lower is better)
Translates to: CVRACVCLWCWKCSGEAAFLSTF*MVSWEL
Trigger: TAGTTCCCAGCTGACCATCAAAAAGGTGGATAAGAA...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CGCCAACATAGGTGGCTTTGCCCCTCAGACCACAGCATGGGATCATTTGGAATCTTCTTATCCACCTTTTaGATGGTCAGCTGGGAACTA +
Preference number: 5 (lower is better)
Translates to: RQHRWLCPSDHSMGSFGIFLSTF*MVSWEL
Trigger: TAGTTCCCAGCTGACCATCAAAAAGGTGGATAAGAA...GATTCCAAATGATCCCATGCTGTGGTCTGAGGGGCAAAGCCACCTATGTTGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CAA 90 bp AACAAGAGAGAAGGCCCCCGAAGTACAGAATGCTGGGTAGGGATGTTAATGGAGAGAGGGGGTGTCTGCTaGAACAAGGATGAATTCCAA +
Preference number: 5 (lower is better)
Translates to: NKREGPRSTECWVGMLMERGGVC*NKDEFQ
Trigger: TTGGAATTCATCCTTGTTCAAGCAGACACCCCCTCT...CTCCATTAACATCCCTACCCAGCATTCTGTACTTCGGGGGCCTTCTCTCTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AGCACACACACTGATATTACCAAGCAGGATTCAGCCCTGAGTCTCCACAAGGGAAGAGGGGGTGTCTGCTaGAACAAGGATGAATTCCAA +
Preference number: 5 (lower is better)
Translates to: STHTDITKQDSALSLHKGRGGVC*NKDEFQ
Trigger: TTGGAATTCATCCTTGTTCAAGCAGACACCCCCTCT...TCCCTTGTGGAGACTCAGGGCTGAATCCTGCTTGGTAATATCAGTGTGTGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CAA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTCACTCAGCTTTGTATTaGAGGATGGGCACCCCACCT +
Preference number: 5 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSHSALY*RMGTPP
Trigger: AGGTGGGGTGCCCATCCTCAAATACAAAGCTGAGTG...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTAGCTCTCCACTCAGCTTaGTATTTGAGGATGGGCACC +
Preference number: 5 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLALHSA*YLRMGT
Trigger: GGTGCCCATCCTCAAATACAAAGCTGAGTGGAGAGC...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTTTGGCATCATACCACTaGGAATGCCATACTTCTTCA +
Preference number: 5 (lower is better)
Translates to: CVRACVCLWCWKCSGEAALASYH*ECHTSS
Trigger: TGAAGAAGTATGGCATTCCAAGTGGTATGATGCCAA...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GGTGTGGCAAAGCCATCGACATTACAAGATGAAGAACTGAGTCCACTGAACAGCTCCATGCTGGCTTCCTaGGCATCATACCACTTGGAA +
Preference number: 5 (lower is better)
Translates to: GVAKPSTLQDEELSPLNSSMLAS*ASYHLE
Trigger: TTCCAAGTGGTATGATGCCAAGGAAGCCAGCATGGA...GCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACAGCCTTACGGCGTACGTaGTTTCGGGCTTCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTALRRT*FRASGP
Trigger: TGGGCCTGAAGCCCGAAACAACGTACGCCGTAAGGC...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCCCCAGCCCTTTGCCATaGAGCGCCGCCAGCCTTACG +
Preference number: 5 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFIPSPLP*SAASLT
Trigger: CGTAAGGCTGGCGGCGCTCAATGGCAAAGGGCTGGG...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTATCTCACCCAGCCCTTaGCCATTGAGCGCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGISPSP*PLSAAS
Trigger: GCTGGCGGCGCTCAATGGCAAAGGGCTGGGTGAGAT...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTCCGCCGTCATCCTGCTaGATCAGGTTCACTTTAATA +
Preference number: 5 (lower is better)
Translates to: WWSCQVLPKGALIFFIGTPPSSC*IRFTLI
Trigger: TATTAAAGTGAACCTGATCAAGCAGGATGACGGCGG...AGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTCGCCTTGGATTTTCCTaGCTGGTTCTCAGCCACCAC +
Preference number: 5 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELRLGFS*LVLSHH
Trigger: GTGGTGGCTGAGAACCAGCAAGGAAAATCCAAGGCG...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCTTCGAGAAGGCGGCCTaGCCCTCCTCCATGTCCTTG +
Preference number: 5 (lower is better)
Translates to: VVSMFHLVKSFITREKAPFEKAA*PSSMSL
Trigger: CAAGGACATGGAGGAGGGCAAGGCCGCCTTCTCGAA...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACATTCGAGAAGGCGGCCTaGCCCTCCTCCATGTCCTTG +
Preference number: 5 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTFEKAA*PSSMSL
Trigger: CAAGGACATGGAGGAGGGCAAGGCCGCCTTCTCGAA...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCTCCCTCCATCATGGTTaGGGGTCCTCTCCTCCTCCG +
Preference number: 5 (lower is better)
Translates to: VVSMFHLVKSFITREKAPSLHHG*GSSPPP
Trigger: CGGAGGAGGAGAGGACCCCAAACCATGATGGAGGGA...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACATCCCTCCATCATGGTTaGGGGTCCTCTCCTCCTCCG +
Preference number: 5 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTSLHHG*GSSPPP
Trigger: CGGAGGAGGAGAGGACCCCAAACCATGATGGAGGGA...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGTCATTGGGGACCGTCTaGACTTCGGCTGGCGCTGGC +
Preference number: 5 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLSLGTV*TSAGAG
Trigger: GCCAGCGCCAGCCGAAGTCAAGACGGTCCCCAATGA...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTTCATTGGGGACCGTCTaGACTTCGGCTGGCGCTGGC +
Preference number: 5 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGSLGTV*TSAGAG
Trigger: GCCAGCGCCAGCCGAAGTCAAGACGGTCCCCAATGA...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp ATGCTGGGTAGGGATGTTAATGGAGGTCTGAAAACCGCCATCCAGACAGACAGCGAGTCTACGTGGGAATaGAATTCAGCTAGAAAGGGT +
Preference number: 5 (lower is better)
Translates to: MLGRDVNGGLKTAIQTDSESTWE*NSARKG
Trigger: ACCCTTTCTAGCTGAATTCAATTCCCACGTAGACTC...GCTGTCTGTCTGGATGGCGGTTTTCAGACCTCCATTAACATCCCTACCCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GGTGTGGCAAAGCCATCGACATTACAAGATGAAGAACTGAGTCCACTGAACAGCTGCCACCCTAACCTCTaGCTGCTTTGTACCTTAGGA +
Preference number: 5 (lower is better)
Translates to: GVAKPSTLQDEELSPLNSCHPNL*LLCTLG
Trigger: TCCTAAGGTACAAAGCAGCAAGAGGTTAGGGTGGCA...GCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TGGCGGCTAATCAGAAAGTGGTCTAACCCCCAAAGAAACACAAAAATAACCAAAAGGTATGGCATGGGCTaGGCCTGGTGTGGCAAAGCC +
Preference number: 5 (lower is better)
Translates to: WRLIRKWSNPQRNTKITKRYGMG*AWCGKA
Trigger: GGCTTTGCCACACCAGGCCAAGCCCATGCCATACCT...TTTGGTTATTTTTGTGTTTCTTTGGGGGTTAGACCACTTTCTGATTAGCCGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACAAGGTATGGCATGGGCTaGGCCTGGTGTGGCAAAGCC +
Preference number: 5 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTRYGMG*AWCGKA
Trigger: GGCTTTGCCACACCAGGCCAAGCCCATGCCATACCT...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTCTAACCACAACCACTTaGACAGTCTTGACAAGGTAT +
Preference number: 5 (lower is better)
Translates to: CVRACVCLWCWKCSGEAALTTTT*TVLTRY
Trigger: ATACCTTGTCAAGACTGTCAAAGTGGTTGTGGTTAG...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGGCCTTCTTGTTCTGCTaGATGGGATGTATGCCATTT +
Preference number: 5 (lower is better)
Translates to: WSCQVLPKGALIFFIGTGAFLFC*MGCMPF
Trigger: AAATGGCATACATCCCATCAAGCAGAACAAGAAGGC...CCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR CAA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGGTTTTGCAAAGACTTaGAGGTGGATGGTCGCATCC +
Preference number: 5 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSGFAKT*RWMVAS
Trigger: GGATGCGACCATCCACCTCAAAGTCTTTGCAAAACC...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AGGGAGGACAAGGAGCACAGAGTTAGAATGAGGGGAATGTGTGGTGATTTTAACGGTTTTGCAAAGACTTaGAGGTGGATGGTCGCATCC +
Preference number: 5 (lower is better)
Translates to: REDKEHRVRMRGMCGDFNGFAKT*RWMVAS
Trigger: GGATGCGACCATCCACCTCAAAGTCTTTGCAAAACC...GTTAAAATCACCACACATTCCCCTCATTCTAACTCTGTGCTCCTTGTCCTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CAA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCAGGGCCCTGTAGCTTaGGGGCATATTGCACTTCAA +
Preference number: 5 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFQGPVA*GHIALQ
Trigger: TTGAAGTGCAATATGCCCCAAAGCTACAGGGCCCTG...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCTGCTGTAATTGGAGCTaGGCAGCAGCTGGCCATCCC +
Preference number: 5 (lower is better)
Translates to: VVSMFHLVKSFITREKAPCCNWS*AAAGHP
Trigger: GGGATGGCCAGCTGCTGCCAAGCTCCAATTACAGCA...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTAGAGGGGGTGTCTGCTaGAACAAGGATGAATTCCAA +
Preference number: 5 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFRGGVC*NKDEFQ
Trigger: TTGGAATTCATCCTTGTTCAAGCAGACACCCCCTCT...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTCACTCAGCTTTGTATTaGAGGATGGGCACCCCACCT +
Preference number: 5 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPHSALY*RMGTPP
Trigger: AGGTGGGGTGCCCATCCTCAAATACAAAGCTGAGTG...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTGCTCTCCACTCAGCTTaGTATTTGAGGATGGGCACC +
Preference number: 5 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFALHSA*YLRMGT
Trigger: GGTGCCCATCCTCAAATACAAAGCTGAGTGGAGAGC...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AAAACCTTCTCTTCCACACAGAATGGTTGCTCAGCAGCTGTGGCCATGGTGGTCTTGGCATCATACCACTaGGAATGCCATACTTCTTCA +
Preference number: 5 (lower is better)
Translates to: KTFSSTQNGCSAAVAMVVLASYH*ECHTSS
Trigger: TGAAGAAGTATGGCATTCCAAGTGGTATGATGCCAA...GACCACCATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAAGAGAAGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAACCCAGCCCTTTGCCATaGAGCGCCGCCAGCCTTACG +
Preference number: 5 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKPSPLP*SAASLT
Trigger: CGTAAGGCTGGCGGCGCTCAATGGCAAAGGGCTGGG...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAAATCTCACCCAGCCCTTaGCCATTGAGCGCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQISPSP*PLSAAS
Trigger: GCTGGCGGCGCTCAATGGCAAAGGGCTGGGTGAGAT...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCATCTCACCCAGCCCTTaGCCATTGAGCGCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFIISPSP*PLSAAS
Trigger: GCTGGCGGCGCTCAATGGCAAAGGGCTGGGTGAGAT...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAACCGCCGTCATCCTGCTaGATCAGGTTCACTTTAATA +
Preference number: 5 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCEPPSSC*IRFTLI
Trigger: TATTAAAGTGAACCTGATCAAGCAGGATGACGGCGG...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTCCGCCGTCATCCTGCTaGATCAGGTTCACTTTAATA +
Preference number: 5 (lower is better)
Translates to: LPGSSKGGTDLFHRNWAFPPSSC*IRFTLI
Trigger: TATTAAAGTGAACCTGATCAAGCAGGATGACGGCGG...AAAAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGCTTTTCCACACAGGTaGACCGCAATGCACATGAAC +
Preference number: 5 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSAFPHR*TAMHMN
Trigger: GTTCATGTGCATTGCGGTCAACCTGTGTGGAAAAGC...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTTCCACGATGGGCTCCTaGGACTCATCTTTCGAGAAG +
Preference number: 5 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELSTMGS*DSSFEK
Trigger: CTTCTCGAAAGATGAGTCCAAGGAGCCCATCGTGGA...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTCCTGGCACTCTGGCTTaGCTTCTACGGGGCCCTTCT +
Preference number: 5 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFPGTLA*LLRGPS
Trigger: AGAAGGGCCCCGTAGAAGCAAAGCCAGAGTGCCAGG...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTCCTGGCACTCTGGCTTaGCTTCTACGGGGCCCTTCT +
Preference number: 5 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGPGTLA*LLRGPS
Trigger: AGAAGGGCCCCGTAGAAGCAAAGCCAGAGTGCCAGG...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAATCATTGGGGACCGTCTaGACTTCGGCTGGCGCTGGC +
Preference number: 5 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQSLGTV*TSAGAG
Trigger: GCCAGCGCCAGCCGAAGTCAAGACGGTCCCCAATGA...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTTGCTCTCGTTCTCCTTaGTCTGTGTGGCGTCATTGG +
Preference number: 5 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELCSRSP*SVWRHW
Trigger: CCAATGACGCCACACAGACAAAGGAGAACGAGAGCA...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAATTCACCCATCATGCTTaGCTCTCGTTCTCCTTTGTC +
Preference number: 5 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCEFTHHA*LSFSFV
Trigger: GACAAAGGAGAACGAGAGCAAAGCATGATGGGTGAA...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAAACGGAGTGTCCTAGTTaGGCTGTGGGTTTAACCTTT +
Preference number: 5 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCETECPS*AVGLTF
Trigger: AAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TGTGTGCGTGCGTGTGTGTGTCTGTGGTGTTGGAAATGCTCTGGTGAAGCTGCTTCATGTTTTGTAAAGTaGTCCTGTGCTAAAGCAAGC +
Preference number: 5 (lower is better)
Translates to: CVRACVCLWCWKCSGEAASCFVK*SCAKAS
Trigger: GCTTGCTTTAGCACAGGACAACTTTACAAAACATGA...AGCAGCTTCACCAGAGCATTTCCAACACCACAGACACACACACGCACGCACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATGCCACCCTAACCTCTaGCTGCTTTGTACCTTAGGA +
Preference number: 5 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLCHPNL*LLCTLG
Trigger: TCCTAAGGTACAAAGCAGCAAGAGGTTAGGGTGGCA...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTAACCACTTTGACAGTCTaGACAAGGTATGGCATGGGC +
Preference number: 5 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLTTLTV*TRYGMG
Trigger: GCCCATGCCATACCTTGTCAAGACTGTCAAAGTGGT...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCCCCTGCTCGTCACACTaGAGTGCTCCTCCAGCAGAA +
Preference number: 5 (lower is better)
Translates to: VVSMFHLVKSFITREKAPPCSSH*SAPPAE
Trigger: TTCTGCTGGAGGAGCACTCAAGTGTGACGAGCAGGG...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
48% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TGGCGGCTAATCAGAAAGTGGTCTAACCCCCAAAGAAACACAAAAATAACCAAATGGCCCGGGTTCGTTTaGATGGAACTGGGATGGGAG +
Preference number: 5 (lower is better)
Translates to: WRLIRKWSNPQRNTKITKWPGFV*MELGWE
Trigger: CTCCCATCCCAGTTCCATCAAAACGAACCCGGGCCA...TTTGGTTATTTTTGTGTTTCTTTGGGGGTTAGACCACTTTCTGATTAGCCGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS GCA 90 bp TTGAACAAGGATGAATTCCAAGGACTCCTGCCCAATGCGGTTCACTaGAGTACAGTTGTAGTTCCCAAAATCATTCTCAGAGTCTGGGGT +
Preference number: 5 (lower is better)
Translates to: LNKDEFQGLLPNAVH*STVVVPKIILRVWG
Trigger: ACCCCAGACTCTGAGAATGATTTTGGGAACTACAACTGTACTGCAGTGAACCGCATTGGGCAGGAGTCCTTGGAATTCATCCTTGTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000526322.5
ENST00000530543.5
ENST00000531044.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CCA 90 bp ATGTACTCAGCCTCGTCGTTCTTATCCACCTTTTTGATGGTCAGCTaGGAACTATCGTCGCTGAAGATGTACTTCTCATCGTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: MYSASSFLSTFLMVS*ELSSLKMYFSSSSS
Trigger: AGAGGAAGACGATGAGAAGTACATCTTCAGCGACGATAGTTCCCAGCTGACCATCAAAAAGGTGGATAAGAACGACGAGGCTGAGTACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000529356.5
ENST00000531044.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CCA 90 bp ACTTGGCATAAGAAGAATTTGGACTCTCCAACGCTGATCTCCCCCTaGCTGGGAACAATATCCACCTGCAGAGAAACTTTTTGTTGCGAT +
Preference number: 5 (lower is better)
Translates to: TWHKKNLDSPTLISP*LGTISTCRETFCCD
Trigger: ATCGCAACAAAAAGTTTCTCTGCAGGTGGATATTGTTCCCAGCCAGGGGGAGATCAGCGTTGGAGAGTCCAAATTCTTCTTATGCCAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000525973.5
ENST00000611284.4
CDS-3UTR CAA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTGATGAGATCCTTAGTTaGCAGCATTGTAATCTGCTG +
Preference number: 5 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLDEILS*QHCNLL
Trigger: CAGCAGATTACAATGCTGCAAACTAAGGATCTCATC...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp CAGTGCGGTCTGGCTCTTTTAACATGGGCACTTAAATGCTTAATTGCAAGCAAAGTGAGCTTTTCTCCATaGGGGGAGAACCAGGAGATG +
Preference number: 5 (lower is better)
Translates to: QCGLALLTWALKCLIASKVSFSP*GENQEM
Trigger: CATCTCCTGGTTCTCCCCCAATGGAGAAAAGCTCAC...TTTGCTTGCAATTAAGCATTTAAGTGCCCATGTTAAAAGAGCCAGACCGCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CAA 90 bp ATCCACTCCCAACACAGCTTGCTTGCTCATCCTAAAATGATACTATTGCTAAGTCCCTCATCTGTTTTCTaGATGCCCCGGATCTGCAGG +
Preference number: 5 (lower is better)
Translates to: IHSQHSLLAHPKMILLLSPSSVF*MPRICR
Trigger: CCTGCAGATCCGGGGCATCAAGAAAACAGATGAGGG...ACTTAGCAATAGTATCATTTTAGGATGAGCAAGCAAGCTGTGTTGGGAGTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CAA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTCTTATCCACCTTTTaGATGGTCAGCTGGGAACTA +
Preference number: 5 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLFLSTF*MVSWEL
Trigger: TAGTTCCCAGCTGACCATCAAAAAGGTGGATAAGAA...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000401611.6
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp TCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTGGGCTTTTGGCATCATACCACTaGGAATGCCATACTTCTTCA +
Preference number: 5 (lower is better)
Translates to: SCQVLPKGALIFFIGTGLLASYH*ECHTSS
Trigger: TGAAGAAGTATGGCATTCCAAGTGGTATGATGCCAA...AAGCCCAGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000401611.6
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp TTCCTCTGCTACATCATATTTAGGTTTGAACCCAAAATGCAACAAGTAGCAGATGCCTTACGGCGTACGTaGTTTCGGGCTTCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: FLCYIIFRFEPKMQQVADALRRT*FRASGP
Trigger: TGGGCCTGAAGCCCGAAACAACGTACGCCGTAAGGC...ATCTGCTACTTGTTGCATTTTGGGTTCAAACCTAAATATGATGTAGCAGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTCCGCCGTCATCCTGCTaGATCAGGTTCACTTTAATA +
Preference number: 5 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSPPSSC*IRFTLI
Trigger: TATTAAAGTGAACCTGATCAAGCAGGATGACGGCGG...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTCCCTCCATCATGGTTaGGGGTCCTCTCCTCCTCCG +
Preference number: 5 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFISLHHG*GSSPPP
Trigger: CGGAGGAGGAGAGGACCCCAAACCATGATGGAGGGA...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAATCATTGGGGACCGTCTaGACTTCGGCTGGCGCTGGC +
Preference number: 5 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKSLGTV*TSAGAG
Trigger: GCCAGCGCCAGCCGAAGTCAAGACGGTCCCCAATGA...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTGTCTGTGTGGCGTCATaGGGGACCGTCTTGACTTCG +
Preference number: 5 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGVCVAS*GTVLTS
Trigger: CGAAGTCAAGACGGTCCCCAATGACGCCACACAGAC...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTTTCACCCATCATGCTTaGCTCTCGTTCTCCTTTGTC +
Preference number: 5 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSFTHHA*LSFSFV
Trigger: GACAAAGGAGAACGAGAGCAAAGCATGATGGGTGAA...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GGTGTGGCAAAGCCATCGACATTACAAGATGAAGAACTGAGTCCACTGAACAGCTCTGAATACTGCAAATaGAGATCTACCCCCAGAAGC +
Preference number: 5 (lower is better)
Translates to: GVAKPSTLQDEELSPLNSSEYCK*RSTPRS
Trigger: GCTTCTGGGGGTAGATCTCAATTTGCAGTATTCAGA...GCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAGGCCCTTCTCGGTCTTaGCTGGCGCAGGCGAAACAG +
Preference number: 5 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKGPSRS*LAQAKQ
Trigger: CTGTTTCGCCTGCGCCAGCAAAGACCGAGAAGGGCC...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR CAA 90 bp TGGTGGTCCTGCCAGGTTCTTCCAAAGGGGGCACTGATCTTTTTCATAGGAACTAACTCCCACACAGCTTaGATGCTTGAACACTATGAA +
Preference number: 5 (lower is better)
Translates to: WWSCQVLPKGALIFFIGTNSHTA*MLEHYE
Trigger: TTCATAGTGTTCAAGCATCAAAGCTGTGTGGGAGTT...AGTTCCTATGAAAAAGATCAGTGCCCCCTTTGGAAGAACCTGGCAGGACCACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR CAA 90 bp AACATAGGTGGCTTTGCCCCTCAGACCACAGCATGGGATCATTTGGAATCCCAACAAAGCCAATTATTATaGAAGGGAGGACAAGGAGCA +
Preference number: 5 (lower is better)
Translates to: NIGGFAPQTTAWDHLESQQSQLL*KGGQGA
Trigger: TGCTCCTTGTCCTCCCTTCAATAATAATTGGCTTTG...TTGGGATTCCAAATGATCCCATGCTGTGGTCTGAGGGGCAAAGCCACCTATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CAA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACAGTGAGCTTTTCTCCATaGGGGGAGAACCAGGAGATG +
Preference number: 5 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTVSFSP*GENQEM
Trigger: CATCTCCTGGTTCTCCCCCAATGGAGAAAAGCTCAC...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AATTTGGGAAAACCAACGAGAGATGTCATTTGCATTGCTTTTGAGATGAAACGTACGGACTGGCCGAGGTaGGCGGTGGCATTCACAATA +
Preference number: 5 (lower is better)
Translates to: NLGKPTRDVICIAFEMKRTDWPR*AVAFTI
Trigger: TATTGTGAATGCCACCGCCAACCTCGGCCAGTCCGT...ACGTTTCATCTCAAAAGCAATGCAAATGACATCTCTCGTTGGTTTTCCCAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CAA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAAACGGACTGGCCGAGGTaGGCGGTGGCATTCACAATA +
Preference number: 5 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQTDWPR*AVAFTI
Trigger: TATTGTGAATGCCACCGCCAACCTCGGCCAGTCCGT...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTTCTGTTCCCCATCCTTaGTCCAGCTCATGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFSVPHP*SSSWWA
Trigger: AGCCCACCATGAGCTGGACAAAGGATGGGGAACAGA...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp ACGTTTAGCAATTTGGGAAAACCAACGAGAGATGTCATTTGCATTGCTTTTGAGTCCTGCTCGCCAGCCTaGTTCTCAGCAATGCAGATG +
Preference number: 5 (lower is better)
Translates to: TFSNLGKPTRDVICIAFESCSPA*FSAMQM
Trigger: CATCTGCATTGCTGAGAACAAGGCTGGCGAGCAGGA...CTCAAAAGCAATGCAAATGACATCTCTCGTTGGTTTTCCCAAATTGCTAAACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CAA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACACAGGGCCCTGTAGCTTaGGGGCATATTGCACTTCAA +
Preference number: 5 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTQGPVA*GHIALQ
Trigger: TTGAAGTGCAATATGCCCCAAAGCTACAGGGCCCTG...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAATGCTGTAATTGGAGCTaGGCAGCAGCTGGCCATCCC +
Preference number: 5 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQCCNWS*AAAGHP
Trigger: GGGATGGCCAGCTGCTGCCAAGCTCCAATTACAGCA...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATAGAGGGGGTGTCTGCTaGAACAAGGATGAATTCCAA +
Preference number: 5 (lower is better)
Translates to: PGSHILLCALRSLFMFLYRGGVC*NKDEFQ
Trigger: TTGGAATTCATCCTTGTTCAAGCAGACACCCCCTCT...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTCGCCTTGGATTTTCCTaGCTGGTTCTCAGCCACCAC +
Preference number: 5 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFRLGFS*LVLSHH
Trigger: GTGGTGGCTGAGAACCAGCAAGGAAAATCCAAGGCG...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAATTCGAGAAGGCGGCCTaGCCCTCCTCCATGTCCTTG +
Preference number: 5 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKFEKAA*PSSMSL
Trigger: CAAGGACATGGAGGAGGGCAAGGCCGCCTTCTCGAA...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTACCTGGCACTCTGGCTTaGCTTCTACGGGGCCCTTCT +
Preference number: 5 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLPGTLA*LLRGPS
Trigger: AGAAGGGCCCCGTAGAAGCAAAGCCAGAGTGCCAGG...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCGTCTGTGTGGCGTCATaGGGGACCGTCTTGACTTCG +
Preference number: 5 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFIVCVAS*GTVLTS
Trigger: CGAAGTCAAGACGGTCCCCAATGACGCCACACAGAC...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTTTCACCCATCATGCTTaGCTCTCGTTCTCCTTTGTC +
Preference number: 5 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPFTHHA*LSFSFV
Trigger: GACAAAGGAGAACGAGAGCAAAGCATGATGGGTGAA...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTACGGAGTGTCCTAGTTaGGCTGTGGGTTTAACCTTT +
Preference number: 5 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELTECPS*AVGLTF
Trigger: AAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATACGGAGTGTCCTAGTTaGGCTGTGGGTTTAACCTTT +
Preference number: 5 (lower is better)
Translates to: PGSHILLCALRSLFMFLYTECPS*AVGLTF
Trigger: AAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CAGACACCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTGAGTCTACGTGGGAATaGAATTCAGCTAGAAAGGGT +
Preference number: 5 (lower is better)
Translates to: QTPRLSHSTVCSKISLHVESTWE*NSARKG
Trigger: ACCCTTTCTAGCTGAATTCAATTCCCACGTAGACTC...AACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGGTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGTATGGCATGGGCTaGGCCTGGTGTGGCAAAGCC +
Preference number: 5 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKRYGMG*AWCGKA
Trigger: GGCTTTGCCACACCAGGCCAAGCCCATGCCATACCT...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGGCCCGGGTTCGTTTaGATGGAACTGGGATGGGAG +
Preference number: 5 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFIWPGFV*MELGWE
Trigger: CTCCCATCCCAGTTCCATCAAAACGAACCCGGGCCA...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTGAGCTTATTATTTTTGCAGAATaGTTTCCTGCCAGCGGCAGC +
Preference number: 5 (lower is better)
Translates to: NRVTPSVVFLNLDFVSELIIFAE*FPASGS
Trigger: GCTGCCGCTGGCAGGAAACAATTCTGCAAAAATAAT...AAGCTCAGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTTGGCATAAGAAGAATTaGGACTCTCCAACGCTGATC +
Preference number: 5 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFWHKKN*DSPTLI
Trigger: GATCAGCGTTGGAGAGTCCAAATTCTTCTTATGCCA...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGGTGAGCTTTTCTCCATaGGGGGAGAACCAGGAGATG +
Preference number: 5 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLVSFSP*GENQEM
Trigger: CATCTCCTGGTTCTCCCCCAATGGAGAAAAGCTCAC...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTGTGAGCTTTTCTCCATaGGGGGAGAACCAGGAGATG +
Preference number: 5 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFVSFSP*GENQEM
Trigger: CATCTCCTGGTTCTCCCCCAATGGAGAAAAGCTCAC...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTATGACATCTCGGCCTTaGTGTTTCCAGATGATGGTT +
Preference number: 5 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPMTSRP*CFQMMV
Trigger: AACCATCATCTGGAAACACAAAGGCCGAGATGTCAT...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TGGCGGCTAATCAGAAAGTGGTCTAACCCCCAAAGAAACACAAAAATAACCAAAGGTTTTGCAAAGACTTaGAGGTGGATGGTCGCATCC +
Preference number: 5 (lower is better)
Translates to: WRLIRKWSNPQRNTKITKGFAKT*RWMVAS
Trigger: GGATGCGACCATCCACCTCAAAGTCTTTGCAAAACC...TTTGGTTATTTTTGTGTTTCTTTGGGGGTTAGACCACTTTCTGATTAGCCGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTCAGGGCCCTGTAGCTTaGGGGCATATTGCACTTCAA +
Preference number: 5 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGQGPVA*GHIALQ
Trigger: TTGAAGTGCAATATGCCCCAAAGCTACAGGGCCCTG...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTGCTCTCCACTCAGCTTaGTATTTGAGGATGGGCACC +
Preference number: 5 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFALHSA*YLRMGT
Trigger: GGTGCCCATCCTCAAATACAAAGCTGAGTGGAGAGC...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TGTGCCAATCGGGTAACACCAAGTGTGGTCTTCCTGAACCTAGATTTCGTTTCTTTGGCATCATACCACTaGGAATGCCATACTTCTTCA +
Preference number: 5 (lower is better)
Translates to: CANRVTPSVVFLNLDFVSLASYH*ECHTSS
Trigger: TGAAGAAGTATGGCATTCCAAGTGGTATGATGCCAA...AGAAACGAAATCTAGGTTCAGGAAGACCACACTTGGTGTTACCCGATTGGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACATCCATGCTGGCTTCCTaGGCATCATACCACTTGGAA +
Preference number: 5 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTSMLAS*ASYHLE
Trigger: TTCCAAGTGGTATGATGCCAAGGAAGCCAGCATGGA...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCCGCCTTGGATTTTCCTaGCTGGTTCTCAGCCACCAC +
Preference number: 5 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFIRLGFS*LVLSHH
Trigger: GTGGTGGCTGAGAACCAGCAAGGAAAATCCAAGGCG...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCGCTTTTCCACACAGGTaGACCGCAATGCACATGAAC +
Preference number: 5 (lower is better)
Translates to: VVSMFHLVKSFITREKAPAFPHR*TAMHMN
Trigger: GTTCATGTGCATTGCGGTCAACCTGTGTGGAAAAGC...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGTCCACGATGGGCTCCTaGGACTCATCTTTCGAGAAG +
Preference number: 5 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLSTMGS*DSSFEK
Trigger: CTTCTCGAAAGATGAGTCCAAGGAGCCCATCGTGGA...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTTCCACGATGGGCTCCTaGGACTCATCTTTCGAGAAG +
Preference number: 5 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGSTMGS*DSSFEK
Trigger: CTTCTCGAAAGATGAGTCCAAGGAGCCCATCGTGGA...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTAAGTGGCGTGGTCTCGTaGGGCTCTGTGTGTTTCCCT +
Preference number: 5 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLSGVVS*GSVCFP
Trigger: AGGGAAACACACAGAGCCCAACGAGACCACGCCACT...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAGTCTGTGTGGCGTCATaGGGGACCGTCTTGACTTCG +
Preference number: 5 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKVCVAS*GTVLTS
Trigger: CGAAGTCAAGACGGTCCCCAATGACGCCACACAGAC...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGTGCTCTCGTTCTCCTTaGTCTGTGTGGCGTCATTGG +
Preference number: 5 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLCSRSP*SVWRHW
Trigger: CCAATGACGCCACACAGACAAAGGAGAACGAGAGCA...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATGAGTCTACGTGGGAATaGAATTCAGCTAGAAAGGGT +
Preference number: 5 (lower is better)
Translates to: PGSHILLCALRSLFMFLYESTWE*NSARKG
Trigger: ACCCTTTCTAGCTGAATTCAATTCCCACGTAGACTC...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATTCTGAATACTGCAAATaGAGATCTACCCCCAGAAGC +
Preference number: 5 (lower is better)
Translates to: PGSHILLCALRSLFMFLYSEYCK*RSTPRS
Trigger: GCTTCTGGGGGTAGATCTCAATTTGCAGTATTCAGA...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAACATTGGAAACTGGAGTaGATCCCTCCTTCAAAAATT +
Preference number: 5 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCEHWKLE*IPPSKI
Trigger: AATTTTTGAAGGAGGGATCAACTCCAGTTTCCAATG...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGTGGTGCATGTACCTCTaGCTTCTCTGGTCGAGTCCA +
Preference number: 5 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLWCMYL*LLWSSP
Trigger: TGGACTCGACCAGAGAAGCAAGAGGTACATGCACCA...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615285.4
CDS-3UTR CAA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTGATGAGATCCTTAGTTaGCAGCATTGTAATCTGCTG +
Preference number: 5 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFDEILS*QHCNLL
Trigger: CAGCAGATTACAATGCTGCAAACTAAGGATCTCATC...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATGATGAGATCCTTAGTTaGCAGCATTGTAATCTGCTG +
Preference number: 5 (lower is better)
Translates to: PGSHILLCALRSLFMFLYDEILS*QHCNLL
Trigger: CAGCAGATTACAATGCTGCAAACTAAGGATCTCATC...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TGGCGGCTAATCAGAAAGTGGTCTAACCCCCAAAGAAACACAAAAATAACCAAAGAGATGTCTTTATCTTaGGCATCTCCTGCCACTTGG +
Preference number: 5 (lower is better)
Translates to: WRLIRKWSNPQRNTKITKEMSLS*ASPATW
Trigger: CCAAGTGGCAGGAGATGCCAAAGATAAAGACATCTC...TTTGGTTATTTTTGTGTTTCTTTGGGGGTTAGACCACTTTCTGATTAGCCGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CAGTGCGGTCTGGCTCTTTTAACATGGGCACTTAAATGCTTAATTGCAAGCAAAATGACATCTCGGCCTTaGTGTTTCCAGATGATGGTT +
Preference number: 5 (lower is better)
Translates to: QCGLALLTWALKCLIASKMTSRP*CFQMMV
Trigger: AACCATCATCTGGAAACACAAAGGCCGAGATGTCAT...TTTGCTTGCAATTAAGCATTTAAGTGCCCATGTTAAAAGAGCCAGACCGCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CAA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTACCCTCATCTGTTTTCTaGATGCCCCGGATCTGCAGG +
Preference number: 5 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLPSSVF*MPRICR
Trigger: CCTGCAGATCCGGGGCATCAAGAAAACAGATGAGGG...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GCTCATCCTAAAATGATACTATTGCTAAGTAATGTCTACCACTATCGACCTATTTCTGTTCCCCATCCTTaGTCCAGCTCATGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: AHPKMILLLSNVYHYRPISVPHP*SSSWWA
Trigger: AGCCCACCATGAGCTGGACAAAGGATGGGGAACAGA...AATAGGTCGATAGTGGTAGACATTACTTAGCAATAGTATCATTTTAGGATGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CAA 90 bp GAATTCTTCCTCTGCTACATCATATTTAGGTTTGAACCCAAAATGCAACAAGTATCTGTTCCCCATCCTTaGTCCAGCTCATGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: EFFLCYIIFRFEPKMQQVSVPHP*SSSWWA
Trigger: AGCCCACCATGAGCTGGACAAAGGATGGGGAACAGA...TACTTGTTGCATTTTGGGTTCAAACCTAAATATGATGTAGCAGAGGAAGAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp CCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATTTCTTATCCACCTTTTaGATGGTCAGCTGGGAACTA +
Preference number: 5 (lower is better)
Translates to: PGSHILLCALRSLFMFLYFLSTF*MVSWEL
Trigger: TAGTTCCCAGCTGACCATCAAAAAGGTGGATAAGAA...ATAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp ACGTTTAGCAATTTGGGAAAACCAACGAGAGATGTCATTTGCATTGCTTTTGAGGGTTTTGCAAAGACTTaGAGGTGGATGGTCGCATCC +
Preference number: 5 (lower is better)
Translates to: TFSNLGKPTRDVICIAFEGFAKT*RWMVAS
Trigger: GGATGCGACCATCCACCTCAAAGTCTTTGCAAAACC...CTCAAAAGCAATGCAAATGACATCTCTCGTTGGTTTTCCCAAATTGCTAAACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CAA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGGGTTTTGCAAAGACTTaGAGGTGGATGGTCGCATCC +
Preference number: 5 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLGFAKT*RWMVAS
Trigger: GGATGCGACCATCCACCTCAAAGTCTTTGCAAAACC...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAACCCATCCAGAGTCTCTaGCTTCTCTGGTCGAGTCCA +
Preference number: 5 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKPIQSL*LLWSSP
Trigger: TGGACTCGACCAGAGAAGCAAGAGACTCTGGATGGG...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316851.12
ENST00000615112.4
CDS-3UTR CAA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAACACTCAGCTTTGTATTaGAGGATGGGCACCCCACCT +
Preference number: 5 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQHSALY*RMGTPP
Trigger: AGGTGGGGTGCCCATCCTCAAATACAAAGCTGAGTG...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAAGCTCTCCACTCAGCTTaGTATTTGAGGATGGGCACC +
Preference number: 5 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQALHSA*YLRMGT
Trigger: GGTGCCCATCCTCAAATACAAAGCTGAGTGGAGAGC...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GGGAGTTTTTATTCAGTAGAAGGTCCATCCCCAAGCACACACACTGATATTACCTTGGCATCATACCACTaGGAATGCCATACTTCTTCA +
Preference number: 5 (lower is better)
Translates to: GSFYSVEGPSPSTHTDITLASYH*ECHTSS
Trigger: TGAAGAAGTATGGCATTCCAAGTGGTATGATGCCAA...GGTAATATCAGTGTGTGTGCTTGGGGATGGACCTTCTACTGAATAAAAACTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CAA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTTCCATGCTGGCTTCCTaGGCATCATACCACTTGGAA +
Preference number: 5 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFSMLAS*ASYHLE
Trigger: TTCCAAGTGGTATGATGCCAAGGAAGCCAGCATGGA...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GTGGTATCGATGTTTCACTTGGTAAAAAGTTTTATAACAAGAGAGAAGGCCCCCCCGCCGTCATCCTGCTaGATCAGGTTCACTTTAATA +
Preference number: 5 (lower is better)
Translates to: VVSMFHLVKSFITREKAPPPSSC*IRFTLI
Trigger: TATTAAAGTGAACCTGATCAAGCAGGATGACGGCGG...GGGGGCCTTCTCTCTTGTTATAAAACTTTTTACCAAGTGAAACATCGATACCAC
43% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTACGCCTTGGATTTTCCTaGCTGGTTCTCAGCCACCAC +
Preference number: 5 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLRLGFS*LVLSHH
Trigger: GTGGTGGCTGAGAACCAGCAAGGAAAATCCAAGGCG...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGGCTTTTCCACACAGGTaGACCGCAATGCACATGAAC +
Preference number: 5 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLAFPHR*TAMHMN
Trigger: GTTCATGTGCATTGCGGTCAACCTGTGTGGAAAAGC...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTCCACGATGGGCTCCTaGGACTCATCTTTCGAGAAG +
Preference number: 5 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFISTMGS*DSSFEK
Trigger: CTTCTCGAAAGATGAGTCCAAGGAGCCCATCGTGGA...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACATTCACCCATCATGCTTaGCTCTCGTTCTCCTTTGTC +
Preference number: 5 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTFTHHA*LSFSFV
Trigger: GACAAAGGAGAACGAGAGCAAAGCATGATGGGTGAA...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACAACGGAGTGTCCTAGTTaGGCTGTGGGTTTAACCTTT +
Preference number: 5 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTTECPS*AVGLTF
Trigger: AAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTAGGCTTCGATTCCGTTaGAGTGATTTTTGTTTCCTG +
Preference number: 5 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFRLRFR*SDFCFL
Trigger: CAGGAAACAAAAATCACTCAAACGGAATCGAAGCCT...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTTGCCACCCTAACCTCTaGCTGCTTTGTACCTTAGGA +
Preference number: 5 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFCHPNL*LLCTLG
Trigger: TCCTAAGGTACAAAGCAGCAAGAGGTTAGGGTGGCA...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CAGGGAACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTAACCACAACCACTTaGACAGTCTTGACAAGGTAT +
Preference number: 5 (lower is better)
Translates to: QGTECPSLAVGLTFLSHFLTTTT*TVLTRY
Trigger: ATACCTTGTCAAGACTGTCAAAGTGGTTGTGGTTAG...AAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGTTCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TCACCAAGACCAGCCCCAACTATACAATCTTCTCTGCTTCATTCAACAAAGCCTCTAACCACAACCACTTaGACAGTCTTGACAAGGTAT +
Preference number: 5 (lower is better)
Translates to: SPRPAPTIQSSLLHSTKPLTTTT*TVLTRY
Trigger: ATACCTTGTCAAGACTGTCAAAGTGGTTGTGGTTAG...AGGCTTTGTTGAATGAAGCAGAGAAGATTGTATAGTTGGGGCTGGTCTTGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GGTGTGGCAAAGCCATCGACATTACAAGATGAAGAACTGAGTCCACTGAACAGCTTAAAGGAAAAACTCTaGCATGCTGAGACAAACCTA +
Preference number: 5 (lower is better)
Translates to: GVAKPSTLQDEELSPLNSLKEKL*HAETNL
Trigger: TAGGTTTGTCTCAGCATGCAAGAGTTTTTCCTTTAA...GCTGTTCAGTGGACTCAGTTCTTCATCTTGTAATGTCGATGGCTTTGCCACACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AGACAGCCTCAAGTGAAAACCTGGGACTCGGAAGGCTCCATAGAAAAGTGTGAATTAAAGGAAAAACTCTaGCATGCTGAGACAAACCTA +
Preference number: 5 (lower is better)
Translates to: RQPQVKTWDSEGSIEKCELKEKL*HAETNL
Trigger: TAGGTTTGTCTCAGCATGCAAGAGTTTTTCCTTTAA...TTCACACTTTTCTATGGAGCCTTCCGAGTCCCAGGTTTTCACTTGAGGCTGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp ATCCACTCCCAACACAGCTTGCTTGCTCATCCTAAAATGATACTATTGCTAAGTTGCCTGGCCTGGGAATaGGGGGCAATTTATTTCTAT +
Preference number: 5 (lower is better)
Translates to: IHSQHSLLAHPKMILLLSCLAWE*GAIYFY
Trigger: ATAGAAATAAATTGCCCCCAATTCCCAGGCCAGGCA...ACTTAGCAATAGTATCATTTTAGGATGAGCAAGCAAGCTGTGTTGGGAGTGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CAA 90 bp CTCTGCTACATCATATTTAGGTTTGAACCCAAAATGCAACAAGTAGCAGATATGTTCCACACAGAATGGTaGCTCAGCAGCTGTGGCCAT +
Preference number: 5 (lower is better)
Translates to: LCYIIFRFEPKMQQVADMFHTEW*LSSCGH
Trigger: ATGGCCACAGCTGCTGAGCAACCATTCTGTGTGGAA...CATATCTGCTACTTGTTGCATTTTGGGTTCAAACCTAAATATGATGTAGCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CCA 90 bp ACAGCTTTGATGCTTGAACACTATGAACATGCACGCATACTCATATaGATTCTTCAGGAGATTCAGGTCCTCCACACACATCTTACTTCA +
Preference number: 5 (lower is better)
Translates to: TALMLEHYEHARILI*ILQEIQVLHTHLTS
Trigger: TGAAGTAAGATGTGTGTGGAGGACCTGAATCTCCTGAAGAATCCATATGAGTATGCGTGCATGTTCATAGTGTTCAAGCATCAAAGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR CAA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGGAGATGTCTTTATCTTaGGCATCTCCTGCCACTTGG +
Preference number: 5 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLEMSLS*ASPATW
Trigger: CCAAGTGGCAGGAGATGCCAAAGATAAAGACATCTC...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CCAGTTTTAGGAAATAATATGGATTTGTTCATCCACTCCCAACACAGCTTGCTTGAGATGTCTTTATCTTaGGCATCTCCTGCCACTTGG +
Preference number: 5 (lower is better)
Translates to: PVLGNNMDLFIHSQHSLLEMSLS*ASPATW
Trigger: CCAAGTGGCAGGAGATGCCAAAGATAAAGACATCTC...AAGCAAGCTGTGTTGGGAGTGGATGAACAAATCCATATTATTTCCTAAAACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CAA 90 bp GCTCATCCTAAAATGATACTATTGCTAAGTAATGTCTACCACTATCGACCTATTGTGAGCTTTTCTCCATaGGGGGAGAACCAGGAGATG +
Preference number: 5 (lower is better)
Translates to: AHPKMILLLSNVYHYRPIVSFSP*GENQEM
Trigger: CATCTCCTGGTTCTCCCCCAATGGAGAAAAGCTCAC...AATAGGTCGATAGTGGTAGACATTACTTAGCAATAGTATCATTTTAGGATGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CAA 90 bp ATCCACTCCCAACACAGCTTGCTTGCTCATCCTAAAATGATACTATTGCTAAGTATGACATCTCGGCCTTaGTGTTTCCAGATGATGGTT +
Preference number: 5 (lower is better)
Translates to: IHSQHSLLAHPKMILLLSMTSRP*CFQMMV
Trigger: AACCATCATCTGGAAACACAAAGGCCGAGATGTCAT...ACTTAGCAATAGTATCATTTTAGGATGAGCAAGCAAGCTGTGTTGGGAGTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CAA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAACAGGGCCCTGTAGCTTaGGGGCATATTGCACTTCAA +
Preference number: 5 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKQGPVA*GHIALQ
Trigger: TTGAAGTGCAATATGCCCCAAAGCTACAGGGCCCTG...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CAACAAGTAGCAGATATGCAGAAACTTCTCTGTAAATCTAGCATGATGGTTTTTCACTCAGCTTTGTATTaGAGGATGGGCACCCCACCT +
Preference number: 5 (lower is better)
Translates to: QQVADMQKLLCKSSMMVFHSALY*RMGTPP
Trigger: AGGTGGGGTGCCCATCCTCAAATACAAAGCTGAGTG...AAAAACCATCATGCTAGATTTACAGAGAAGTTTCTGCATATCTGCTACTTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp GAATTCTTCCTCTGCTACATCATATTTAGGTTTGAACCCAAAATGCAACAAGTACACTCAGCTTTGTATTaGAGGATGGGCACCCCACCT +
Preference number: 5 (lower is better)
Translates to: EFFLCYIIFRFEPKMQQVHSALY*RMGTPP
Trigger: AGGTGGGGTGCCCATCCTCAAATACAAAGCTGAGTG...TACTTGTTGCATTTTGGGTTCAAACCTAAATATGATGTAGCAGAGGAAGAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000531817.5
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAGCTCTCCACTCAGCTTaGTATTTGAGGATGGGCACC +
Preference number: 5 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKALHSA*YLRMGT
Trigger: GGTGCCCATCCTCAAATACAAAGCTGAGTGGAGAGC...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GAACACTATGAACATGCACGCATACTCATATGGATTCTTCAGGAGATTCAGGTCTTGGCATCATACCACTaGGAATGCCATACTTCTTCA +
Preference number: 5 (lower is better)
Translates to: EHYEHARILIWILQEIQVLASYH*ECHTSS
Trigger: TGAAGAAGTATGGCATTCCAAGTGGTATGATGCCAA...GACCTGAATCTCCTGAAGAATCCATATGAGTATGCGTGCATGTTCATAGTGTTC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS-3UTR CAA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAATCCATGCTGGCTTCCTaGGCATCATACCACTTGGAA +
Preference number: 5 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQSMLAS*ASYHLE
Trigger: TTCCAAGTGGTATGATGCCAAGGAAGCCAGCATGGA...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGCCGCCGTCATCCTGCTaGATCAGGTTCACTTTAATA +
Preference number: 5 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLPPSSC*IRFTLI
Trigger: TATTAAAGTGAACCTGATCAAGCAGGATGACGGCGG...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGTTCACCCATCATGCTTaGCTCTCGTTCTCCTTTGTC +
Preference number: 5 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLFTHHA*LSFSFV
Trigger: GACAAAGGAGAACGAGAGCAAAGCATGATGGGTGAA...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTACGGAGTGTCCTAGTTaGGCTGTGGGTTTAACCTTT +
Preference number: 5 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFTECPS*AVGLTF
Trigger: AAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCACCACTTTGACAGTCTaGACAAGGTATGGCATGGGC +
Preference number: 5 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFITTLTV*TRYGMG
Trigger: GCCCATGCCATACCTTGTCAAGACTGTCAAAGTGGT...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CCCAGGCTCTCACATTCTACTGTGTGCTCTAAGATCTCTCTTCATGTTCCTCTATTAAAGGAAAAACTCTaGCATGCTGAGACAAACCTA +
Preference number: 5 (lower is better)
Translates to: PRLSHSTVCSKISLHVPLLKEKL*HAETNL
Trigger: TAGGTTTGTCTCAGCATGCAAGAGTTTTTCCTTTAA...TAGAGGAACATGAAGAGAGATCTTAGAGCACACAGTAGAATGTGAGAGCCTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CAACACAGCTTGCTTGCTCATCCTAAAATGATACTATTGCTAAGTAATGTCTACGGTAAGCTATACCTCTaGCTTCTCTGGTCGAGTCCA +
Preference number: 5 (lower is better)
Translates to: QHSLLAHPKMILLLSNVYGKLYL*LLWSSP
Trigger: TGGACTCGACCAGAGAAGCAAGAGGTATAGCTTACC...GTAGACATTACTTAGCAATAGTATCATTTTAGGATGAGCAAGCAAGCTGTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CAA 90 bp ACGTTTAGCAATTTGGGAAAACCAACGAGAGATGTCATTTGCATTGCTTTTGAGCACTCCCAACACAGCTaGCTTGCTCATCCTAAAATG +
Preference number: 5 (lower is better)
Translates to: TFSNLGKPTRDVICIAFEHSQHS*LAHPKM
Trigger: CATTTTAGGATGAGCAAGCAAGCTGTGTTGGGAGTG...CTCAAAAGCAATGCAAATGACATCTCTCGTTGGTTTTCCCAAATTGCTAAACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CAA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACATCAATATCTGGGGTCTaGAAGTTCCCTTCGTCCATT +
Preference number: 5 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTSISGV*KFPSSI
Trigger: AATGGACGAAGGGAACTTCAAGACCCCAGATATTGA...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS-3UTR CAA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTATTTCTGTCTGCCCACTaGCCAGTTCCATGGTGCATG +
Preference number: 5 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLFLSAH*PVPWCM
Trigger: CATGCACCATGGAACTGGCAAGTGGGCAGACAGAAA...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615285.4
CDS-3UTR CAA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGATTATTTTTGCAGAATaGTTTCCTGCCAGCGGCAGC +
Preference number: 5 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLIIFAE*FPASGS
Trigger: GCTGCCGCTGGCAGGAAACAATTCTGCAAAAATAAT...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp ACGTTTAGCAATTTGGGAAAACCAACGAGAGATGTCATTTGCATTGCTTTTGAGATTATTTTTGCAGAATaGTTTCCTGCCAGCGGCAGC +
Preference number: 5 (lower is better)
Translates to: TFSNLGKPTRDVICIAFEIIFAE*FPASGS
Trigger: GCTGCCGCTGGCAGGAAACAATTCTGCAAAAATAAT...CTCAAAAGCAATGCAAATGACATCTCTCGTTGGTTTTCCCAAATTGCTAAACGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CAA 90 bp ATCCACTCCCAACACAGCTTGCTTGCTCATCCTAAAATGATACTATTGCTAAGTGATGAGATCCTTAGTTaGCAGCATTGTAATCTGCTG +
Preference number: 5 (lower is better)
Translates to: IHSQHSLLAHPKMILLLSDEILS*QHCNLL
Trigger: CAGCAGATTACAATGCTGCAAACTAAGGATCTCATC...ACTTAGCAATAGTATCATTTTAGGATGAGCAAGCAAGCTGTGTTGGGAGTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CAA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACAGATGAGATCCTTAGTTaGCAGCATTGTAATCTGCTG +
Preference number: 5 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTDEILS*QHCNLL
Trigger: CAGCAGATTACAATGCTGCAAACTAAGGATCTCATC...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCGAGATGTCTTTATCTTaGGCATCTCCTGCCACTTGG +
Preference number: 5 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFIEMSLS*ASPATW
Trigger: CCAAGTGGCAGGAGATGCCAAAGATAAAGACATCTC...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATGACATCTCGGCCTTaGTGTTTCCAGATGATGGTT +
Preference number: 5 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFMTSRP*CFQMMV
Trigger: AACCATCATCTGGAAACACAAAGGCCGAGATGTCAT...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp ACGGAGTGTCCTAGTTTGGCTGTGGGTTTAACCTTTTTGTCTCATTTTCTTACATTGGCATCATACCACTaGGAATGCCATACTTCTTCA +
Preference number: 5 (lower is better)
Translates to: TECPSLAVGLTFLSHFLTLASYH*ECHTSS
Trigger: TGAAGAAGTATGGCATTCCAAGTGGTATGATGCCAA...TGTAAGAAAATGAGACAAAAAGGTTAAACCCACAGCCAAACTAGGACACTCCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TGGCGGCTAATCAGAAAGTGGTCTAACCCCCAAAGAAACACAAAAATAACCAAATTGGCATCATACCACTaGGAATGCCATACTTCTTCA +
Preference number: 5 (lower is better)
Translates to: WRLIRKWSNPQRNTKITKLASYH*ECHTSS
Trigger: TGAAGAAGTATGGCATTCCAAGTGGTATGATGCCAA...TTTGGTTATTTTTGTGTTTCTTTGGGGGTTAGACCACTTTCTGATTAGCCGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTATCCATGCTGGCTTCCTaGGCATCATACCACTTGGAA +
Preference number: 5 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLSMLAS*ASYHLE
Trigger: TTCCAAGTGGTATGATGCCAAGGAAGCCAGCATGGA...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAATGCCACCCTAACCTCTaGCTGCTTTGTACCTTAGGA +
Preference number: 5 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKCHPNL*LLCTLG
Trigger: TCCTAAGGTACAAAGCAGCAAGAGGTTAGGGTGGCA...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS GCA 90 bp AGAGAAACTTTTTGTTGCGATGTGAAACAGATGAAGGAATTTCATTaGAACAGAACACAGCAGCACATCATCAGGTTGGAAAGCAAAGCA +
Preference number: 5 (lower is better)
Translates to: RETFCCDVKQMKEFH*NRTQQHIIRLESKA
Trigger: TGCTTTGCTTTCCAACCTGATGATGTGCTGCTGTGTTCTGTTGCAATGAAATTCCTTCATCTGTTTCACATCGCAACAAAAAGTTTCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611284.4
CDS-3UTR CAA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAATGGCATAAGAAGAATTaGGACTCTCCAACGCTGATC +
Preference number: 5 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQWHKKN*DSPTLI
Trigger: GATCAGCGTTGGAGAGTCCAAATTCTTCTTATGCCA...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTTTCTTATCCACCTTTTaGATGGTCAGCTGGGAACTA +
Preference number: 5 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGFLSTF*MVSWEL
Trigger: TAGTTCCCAGCTGACCATCAAAAAGGTGGATAAGAA...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGTTCTTATCCACCTTTTaGATGGTCAGCTGGGAACTA +
Preference number: 5 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLFLSTF*MVSWEL
Trigger: TAGTTCCCAGCTGACCATCAAAAAGGTGGATAAGAA...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp GTGCAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTTTGGCATCATACCACTaGGAATGCCATACTTCTTCA +
Preference number: 5 (lower is better)
Translates to: VQQRDPFYKPTKRRFPCFLASYH*ECHTSS
Trigger: TGAAGAAGTATGGCATTCCAAGTGGTATGATGCCAA...AAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCAC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTATTCACCCATCATGCTTaGCTCTCGTTCTCCTTTGTC +
Preference number: 5 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLFTHHA*LSFSFV
Trigger: GACAAAGGAGAACGAGAGCAAAGCATGATGGGTGAA...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp ATATTTAGGTTTGAACCCAAAATGCAACAAGTAGCAGATATGCAGAAACTTCTCACAGCATGGGATCATTaGGAATCCCAAAGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: IFRFEPKMQQVADMQKLLTAWDH*ESQRER
Trigger: CCTTTCCCTTTGGGATTCCAAATGATCCCATGCTGT...GAGAAGTTTCTGCATATCTGCTACTTGTTGCATTTTGGGTTCAAACCTAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621128.4
ENST00000621518.4
CDS-3UTR CAA 90 bp CTCTGCTACATCATATTTAGGTTTGAACCCAAAATGCAACAAGTAGCAGATATGGATGAGATCCTTAGTTaGCAGCATTGTAATCTGCTG +
Preference number: 5 (lower is better)
Translates to: LCYIIFRFEPKMQQVADMDEILS*QHCNLL
Trigger: CAGCAGATTACAATGCTGCAAACTAAGGATCTCATC...CATATCTGCTACTTGTTGCATTTTGGGTTCAAACCTAAATATGATGTAGCAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp GCTCATCCTAAAATGATACTATTGCTAAGTAATGTCTACCACTATCGACCTATTTGGCATAAGAAGAATTaGGACTCTCCAACGCTGATC +
Preference number: 5 (lower is better)
Translates to: AHPKMILLLSNVYHYRPIWHKKN*DSPTLI
Trigger: GATCAGCGTTGGAGAGTCCAAATTCTTCTTATGCCA...AATAGGTCGATAGTGGTAGACATTACTTAGCAATAGTATCATTTTAGGATGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CAA 90 bp ATATTTAGGTTTGAACCCAAAATGCAACAAGTAGCAGATATGCAGAAACTTCTCTGGCATAAGAAGAATTaGGACTCTCCAACGCTGATC +
Preference number: 5 (lower is better)
Translates to: IFRFEPKMQQVADMQKLLWHKKN*DSPTLI
Trigger: GATCAGCGTTGGAGAGTCCAAATTCTTCTTATGCCA...GAGAAGTTTCTGCATATCTGCTACTTGTTGCATTTTGGGTTCAAACCTAAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS-3UTR CAA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTAATGACATCTCGGCCTTaGTGTTTCCAGATGATGGTT +
Preference number: 5 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLMTSRP*CFQMMV
Trigger: AACCATCATCTGGAAACACAAAGGCCGAGATGTCAT...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTTCTTATCCACCTTTTaGATGGTCAGCTGGGAACTA +
Preference number: 5 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFIFLSTF*MVSWEL
Trigger: TAGTTCCCAGCTGACCATCAAAAAGGTGGATAAGAA...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CAACACAGCTTGCTTGCTCATCCTAAAATGATACTATTGCTAAGTAATGTCTACTTCTTATCCACCTTTTaGATGGTCAGCTGGGAACTA +
Preference number: 5 (lower is better)
Translates to: QHSLLAHPKMILLLSNVYFLSTF*MVSWEL
Trigger: TAGTTCCCAGCTGACCATCAAAAAGGTGGATAAGAA...GTAGACATTACTTAGCAATAGTATCATTTTAGGATGAGCAAGCAAGCTGTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CAA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAATCTGAATACTGCAAATaGAGATCTACCCCCAGAAGC +
Preference number: 5 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKSEYCK*RSTPRS
Trigger: GCTTCTGGGGGTAGATCTCAATTTGCAGTATTCAGA...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp TTAAAGGCAAAAGACACTAGAGAAATGAGATGTGTGTGTGTGCATGTGTGTTTGTCATGTTTTGTAAAGTaGTCCTGTGCTAAAGCAAGC +
Preference number: 5 (lower is better)
Translates to: LKAKDTREMRCVCVHVCLSCFVK*SCAKAS
Trigger: GCTTGCTTTAGCACAGGACAACTTTACAAAACATGA...CAAACACACATGCACACACACACATCTCATTTCTCTAGTGTCTTTTGCCTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTTCATGTTTTGTAAAGTaGTCCTGTGCTAAAGCAAGC +
Preference number: 5 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGSCFVK*SCAKAS
Trigger: GCTTGCTTTAGCACAGGACAACTTTACAAAACATGA...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCAGGCTTCGATTCCGTTaGAGTGATTTTTGTTTCCTG +
Preference number: 5 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFIRLRFR*SDFCFL
Trigger: CAGGAAACAAAAATCACTCAAACGGAATCGAAGCCT...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCCTAACCACAACCACTTaGACAGTCTTGACAAGGTAT +
Preference number: 5 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFILTTTT*TVLTRY
Trigger: ATACCTTGTCAAGACTGTCAAAGTGGTTGTGGTTAG...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp AGTATTTACACCAGTGAGAATGGAAACAAAGGTGGTATCGATGTTTCACTTGGTCATTGGAAACTGGAGTaGATCCCTCCTTCAAAAATT +
Preference number: 5 (lower is better)
Translates to: SIYTSENGNKGGIDVSLGHWKLE*IPPSKI
Trigger: AATTTTTGAAGGAGGGATCAACTCCAGTTTCCAATG...ACCAAGTGAAACATCGATACCACCTTTGTTTCCATTCTCACTGGTGTAAATACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp ACGTTTAGCAATTTGGGAAAACCAACGAGAGATGTCATTTGCATTGCTTTTGAGGGAAATAATATGGATTaGTTCATCCACTCCCAACAC +
Preference number: 5 (lower is better)
Translates to: TFSNLGKPTRDVICIAFEGNNMD*FIHSQH
Trigger: GTGTTGGGAGTGGATGAACAAATCCATATTATTTCC...CTCAAAAGCAATGCAAATGACATCTCTCGTTGGTTTTCCCAAATTGCTAAACGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529356.5
CDS-3UTR CAA 90 bp AGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTGTTTAGATGAGATCCTTAGTTaGCAGCATTGTAATCTGCTG +
Preference number: 5 (lower is better)
Translates to: RDPFYKPTKRRFPCFICLDEILS*QHCNLL
Trigger: CAGCAGATTACAATGCTGCAAACTAAGGATCTCATC...TAAACAGATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAATTGGCATCATACCACTaGGAATGCCATACTTCTTCA +
Preference number: 5 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKLASYH*ECHTSS
Trigger: TGAAGAAGTATGGCATTCCAAGTGGTATGATGCCAA...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp CAACAAAGGGACCCTTTCTATAAACCTACAAAAAGGAGATTCCCATGTTTTATCTCATGTTTTGTAAAGTaGTCCTGTGCTAAAGCAAGC +
Preference number: 5 (lower is better)
Translates to: QQRDPFYKPTKRRFPCFISCFVK*SCAKAS
Trigger: GCTTGCTTTAGCACAGGACAACTTTACAAAACATGA...GATAAAACATGGGAATCTCCTTTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp ACTATGACAAAAACACGTTTCACACTAAAATATTCACGCATCCACAGTGCACAACATTGGAAACTGGAGTaGATCCCTCCTTCAAAAATT +
Preference number: 5 (lower is better)
Translates to: TMTKTRFTLKYSRIHSAQHWKLE*IPPSKI
Trigger: AATTTTTGAAGGAGGGATCAACTCCAGTTTCCAATG...TTGTGCACTGTGGATGCGTGAATATTTTAGTGTGAAACGTGTTTTTGTCATAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS-3UTR CAA 90 bp ATTTTCTTACAAGTGAGTGTGCAACAAAGGGACCCTTTCTATAAACCTACAAAACATTGGAAACTGGAGTaGATCCCTCCTTCAAAAATT +
Preference number: 5 (lower is better)
Translates to: IFLQVSVQQRDPFYKPTKHWKLE*IPPSKI
Trigger: AATTTTTGAAGGAGGGATCAACTCCAGTTTCCAATG...TTTTGTAGGTTTATAGAAAGGGTCCCTTTGTTGCACACTCACTTGTAAGAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316851.12
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS CCA 72 bp CTGCCTCGGCCGGGCTCTTCGCGGCTCCGGGCTGGGTaGGCTCCGGGTCCGGGCCTTTGGTGCTGGGAGCCT +
Preference number: 6 (lower is better)
Translates to: LPRPGSSRLRAG*APGPGLWCWEP
Trigger: AGGCTCCCAGCACCAAAGGCCCGGACCCGGAGCCCACCCAGCCCGGAGCCGCGAAGAGCCCGGCCGAGGCAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS GCA 72 bp GGCAGCCTCGCTCTTCGGGCTAGCAAGGGCTGTGGCTaGCTCGGCCGGGCTCTTCGCGGCTCCGGGCTGGGT +
Preference number: 6 (lower is better)
Translates to: GSLALRASKGCG*LGRALRGSGLG
Trigger: ACCCAGCCCGGAGCCGCGAAGAGCCCGGCCGAGGCAGCCACAGCCCTTGCTAGCCCGAAGAGCGAGGCTGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS CCA 72 bp GGATGCCCACGATGGCCCCGGTGCTCAGGCCTGAGGTaGGGCTGCCGTTGGCTTGAGTGGGAGAGAGATGGC +
Preference number: 6 (lower is better)
Translates to: GCPRWPRCSGLR*GCRWLEWERDG
Trigger: GCCATCTCTCTCCCACTCAAGCCAACGGCAGCCCCACCTCAGGCCTGAGCACCGGGGCCATCGTGGGCATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533226.2
CDS CAA 72 bp CCTTGGAAGGGGTGGCCTGGCCAGCCGGTACAGAGTTaGAGTCAGGCGTGGCCGTGGCCGGCGGGGCAATAC +
Preference number: 6 (lower is better)
Translates to: PWKGWPGQPVQS*SQAWPWPAGQY
Trigger: GTATTGCCCCGCCGGCCACGGCCACGCCTGACTCAAACTCTGTACCGGCTGGCCAGGCCACCCCTTCCAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS TCA 72 bp CTTGGAAGGGGTGGCCTGGCCAGCCGGTACAGAGTTTaGGTCAGGCGTGGCCGTGGCCGGCGGGGCAATACT +
Preference number: 6 (lower is better)
Translates to: LGRGGLASRYRV*VRRGRGRRGNT
Trigger: AGTATTGCCCCGCCGGCCACGGCCACGCCTGACTCAAACTCTGTACCGGCTGGCCAGGCCACCCCTTCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS TCA 72 bp GATGAGGATGCCCACGATGGCCCCGGTGCTCAGGCCTaGGGTGGGGCTGCCGTTGGCTTGAGTGGGAGAGAG +
Preference number: 6 (lower is better)
Translates to: DEDAHDGPGAQA*GGAAVGLSGRE
Trigger: CTCTCTCCCACTCAAGCCAACGGCAGCCCCACCTCAGGCCTGAGCACCGGGGCCATCGTGGGCATCCTCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533226.2
CDS CCA 72 bp GGCCGTAGTGTCGGCAGGCAGCTCGGGCTCCGTCAGTaGCGTGGTCTCGTTGGGCTCTGTGTGTTTCCCTCC +
Preference number: 6 (lower is better)
Translates to: GRSVGRQLGLRQ*RGLVGLCVFPS
Trigger: GGAGGGAAACACACAGAGCCCAACGAGACCACGCCACTGACGGAGCCCGAGCTGCCTGCCGACACTACGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528158.2
ENST00000611284.4
CDS CCA 72 bp TGGCCGTGGCCGGCGGGGCAATACTGGAGGTCAGGGTaGTGGTCTCACTGGTGGGGCTGTTCTGAGCAGTGG +
Preference number: 6 (lower is better)
Translates to: WPWPAGQYWRSG*WSHWWGCSEQW
Trigger: CCACTGCTCAGAACAGCCCCACCAGTGAGACCACCACCCTGACCTCCAGTATTGCCCCGCCGGCCACGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS CAA 72 bp AGAGCTGTCTGCAGTGGAAGGAGCAAGCTCAGGGGCTaGTCCACTGGCCCCAGCGGCGGGAGCAGGAGAGCC +
Preference number: 6 (lower is better)
Translates to: RAVCSGRSKLRG*STGPSGGSRRA
Trigger: GGCTCTCCTGCTCCCGCCGCTGGGGCCAGTGGACAAGCCCCTGAGCTTGCTCCTTCCACTGCAGACAGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS GCA 72 bp GCACTGGGTTCCCGTGGAGGAGGGCTATGGACTGGCTaGGTCTTGAACTCGGAGGCCGCGCTGATCTCACCC +
Preference number: 6 (lower is better)
Translates to: ALGSRGGGLWTG*VLNSEAALISP
Trigger: GGGTGAGATCAGCGCGGCCTCCGAGTTCAAGACGCAGCCAGTCCATAGCCCTCCTCCACGGGAACCCAGTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530543.5
CDS CCA 72 bp CCGTGGCCGGCGGGGCAATACTGGAGGTCAGGGTGGTaGTCTCACTGGTGGGGCTGTTCTGAGCAGTGGCAA +
Preference number: 6 (lower is better)
Translates to: PWPAGQYWRSGW*SHWWGCSEQWQ
Trigger: TTGCCACTGCTCAGAACAGCCCCACCAGTGAGACCACCACCCTGACCTCCAGTATTGCCCCGCCGGCCACGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS CAA 72 bp GATGCCGGTGGAGGAGGGCTATGGACTGGCTGCGTCTaGAACTCGGAGGCCGCGCTGATCTCACCCAGCCCT +
Preference number: 6 (lower is better)
Translates to: DAGGGGLWTGCV*NSEAALISPSP
Trigger: AGGGCTGGGTGAGATCAGCGCGGCCTCCGAGTTCAAGACGCAGCCAGTCCATAGCCCTCCTCCACCGGCATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000528590.5
ENST00000531817.5
ENST00000621518.4
ENST00000621850.4
CDS CAA 72 bp GGTTCCCGTGGAGGAGGGCTATGGACTGGCTGCGTCTaGAACTCGGAGGCCGCGCTGATCTCACCCAGCCCT +
Preference number: 6 (lower is better)
Translates to: GSRGGGLWTGCV*NSEAALISPSP
Trigger: AGGGCTGGGTGAGATCAGCGCGGCCTCCGAGTTCAAGACGCAGCCAGTCCATAGCCCTCCTCCACGGGAACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530543.5
CDS CAA 90 bp GGCTGCGTCTTGAACTCGGAGGCCGCGCTGATCTCACCCAGCCCTTaGCCATTGAGCGCCGCCAGCCTTACGGCGTACGTTGTTTCGGGC +
Preference number: 6 (lower is better)
Translates to: GCVLNSEAALISPSP*PLSAASLTAYVVSG
Trigger: GCCCGAAACAACGTACGCCGTAAGGCTGGCGGCGCTCAATGGCAAAGGGCTGGGTGAGATCAGCGCGGCCTCCGAGTTCAAGACGCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000525355.5
ENST00000526322.5
ENST00000528590.5
ENST00000530543.5
ENST00000531044.5
ENST00000531817.5
ENST00000533073.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS TCA 72 bp TGGGCTCTGGGAAGCCTTCGGCATCGCACACCAGGGTaGCGGACTGGCCGAGGTTGGCGGTGGCATTCACAA +
Preference number: 6 (lower is better)
Translates to: WALGSLRHRTPG*RTGRGWRWHSQ
Trigger: TTGTGAATGCCACCGCCAACCTCGGCCAGTCCGTCACCCTGGTGTGCGATGCCGAAGGCTTCCCAGAGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000529356.5
ENST00000531044.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS GCA 72 bp CTAGCAGATGCCGGTGGAGGAGGGCTATGGACTGGCTaGGTCTTGAACTCGGAGGCCGCGCTGATCTCACCC +
Preference number: 6 (lower is better)
Translates to: LADAGGGGLWTG*VLNSEAALISP
Trigger: GGGTGAGATCAGCGCGGCCTCCGAGTTCAAGACGCAGCCAGTCCATAGCCCTCCTCCACCGGCATCTGCTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000528590.5
ENST00000531817.5
ENST00000621518.4
ENST00000621850.4
CDS CCA 72 bp GGCTGGCGCTGGCTTCGTTTCTGTCTCCTGGCACTCTaGCTTTGCTTCTACGGGGCCCTTCTCGGGCTCCGT +
Preference number: 6 (lower is better)
Translates to: GWRWLRFCLLAL*LCFYGALLGLR
Trigger: ACGGAGCCCGAGAAGGGCCCCGTAGAAGCAAAGCCAGAGTGCCAGGAGACAGAAACGAAGCCAGCGCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316851.12
ENST00000528590.5
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
CDS CCA 72 bp CGAGCTAGCAGATGCCGGTGGAGGAGGGCTATGGACTaGCTGCGTCTTGAACTCGGAGGCCGCGCTGATCTC +
Preference number: 6 (lower is better)
Translates to: RASRCRWRRAMD*LRLELGGRADL
Trigger: GAGATCAGCGCGGCCTCCGAGTTCAAGACGCAGCCAGTCCATAGCCCTCCTCCACCGGCATCTGCTAGCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000528590.5
ENST00000531817.5
ENST00000621518.4
ENST00000621850.4
CDS CCA 72 bp AGGTGCACTGGGTTCCCGTGGAGGAGGGCTATGGACTaGCTGCGTCTTGAACTCGGAGGCCGCGCTGATCTC +
Preference number: 6 (lower is better)
Translates to: RCTGFPWRRAMD*LRLELGGRADL
Trigger: GAGATCAGCGCGGCCTCCGAGTTCAAGACGCAGCCAGTCCATAGCCCTCCTCCACGGGAACCCAGTGCACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530543.5
CDS CCA 72 bp AGCTTAGGTGCACTGGGTTCCCGTGGAGGAGGGCTATaGACTGGCTGCGTCTTGAACTCGGAGGCCGCGCTG +
Preference number: 6 (lower is better)
Translates to: SLGALGSRGGGL*TGCVLNSEAAL
Trigger: CAGCGCGGCCTCCGAGTTCAAGACGCAGCCAGTCCATAGCCCTCCTCCACGGGAACCCAGTGCACCTAAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530543.5
CDS CCA 72 bp GGCTGGCGCTGGCTTCGTTTCTGTCTCCTGGCACTCTaGCTTTGCTTCTACGGGGCCCTTCTGGTGGGGCTG +
Preference number: 6 (lower is better)
Translates to: GWRWLRFCLLAL*LCFYGALLVGL
Trigger: CAGCCCCACCAGAAGGGCCCCGTAGAAGCAAAGCCAGAGTGCCAGGAGACAGAAACGAAGCCAGCGCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611284.4
CDS CAA 72 bp TCGGAGGCCGCGCTGATCTCACCCAGCCCTTTGCCATaGAGCGCCGCCAGCCTTACGGCGTACGTTGTTTCG +
Preference number: 6 (lower is better)
Translates to: SEAALISPSPLP*SAASLTAYVVS
Trigger: CGAAACAACGTACGCCGTAAGGCTGGCGGCGCTCAATGGCAAAGGGCTGGGTGAGATCAGCGCGGCCTCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000525355.5
ENST00000526322.5
ENST00000528590.5
ENST00000530543.5
ENST00000531044.5
ENST00000531817.5
ENST00000533073.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CAA 72 bp ATGGGCTCCTTGGACTCATCTTTCGAGAAGGCGGCCTaGCCCTCCTCCATGTCCTTGCCCTTGGCCCCGGGC +
Preference number: 6 (lower is better)
Translates to: MGSLDSSFEKAA*PSSMSLPLAPG
Trigger: GCCCGGGGCCAAGGGCAAGGACATGGAGGAGGGCAAGGCCGCCTTCTCGAAAGATGAGTCCAAGGAGCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000528590.5
ENST00000531044.5
ENST00000533073.5
ENST00000533226.2
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
CDS CAA 72 bp AGCTTAGGTGCACTGGGTTCCCGGACTGGCTGCGTCTaGAACTCGGAGGCCGCGCTGATCTCACCCAGCCCT +
Preference number: 6 (lower is better)
Translates to: SLGALGSRTGCV*NSEAALISPSP
Trigger: AGGGCTGGGTGAGATCAGCGCGGCCTCCGAGTTCAAGACGCAGCCAGTCCGGGAACCCAGTGCACCTAAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401611.6
ENST00000525355.5
ENST00000533073.5
CDS CAA 72 bp TTAGGTGCACTGGGTTCCCCTGGGACTGGCTGCGTCTaGAACTCGGAGGCCGCGCTGATCTCACCCAGCCCT +
Preference number: 6 (lower is better)
Translates to: LGALGSPGTGCV*NSEAALISPSP
Trigger: AGGGCTGGGTGAGATCAGCGCGGCCTCCGAGTTCAAGACGCAGCCAGTCCCAGGGGAACCCAGTGCACCTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS CAA 90 bp GGTGCACTGGGTTCCCGTGGAGGAGGGCTATGGACTGGCTGCGTCTaGAACTCGGAGGCCGCGCTGATCTCACCCAGCCCTTTGCCATTG +
Preference number: 6 (lower is better)
Translates to: GALGSRGGGLWTGCV*NSEAALISPSPLPL
Trigger: CAATGGCAAAGGGCTGGGTGAGATCAGCGCGGCCTCCGAGTTCAAGACGCAGCCAGTCCATAGCCCTCCTCCACGGGAACCCAGTGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530543.5
CDS CAA 90 bp GTCTTGAACTCGGAGGCCGCGCTGATCTCACCCAGCCCTTTGCCATaGAGCGCCGCCAGCCTTACGGCGTACGTTGTTTCGGGCTTCAGG +
Preference number: 6 (lower is better)
Translates to: VLNSEAALISPSPLP*SAASLTAYVVSGFR
Trigger: CCTGAAGCCCGAAACAACGTACGCCGTAAGGCTGGCGGCGCTCAATGGCAAAGGGCTGGGTGAGATCAGCGCGGCCTCCGAGTTCAAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000525355.5
ENST00000526322.5
ENST00000528590.5
ENST00000530543.5
ENST00000531044.5
ENST00000531817.5
ENST00000533073.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CAA 90 bp TTGGACTCATCTTTCGAGAAGGCGGCCTTGCCCTCCTCCATGTCCTaGCCCTTGGCCCCGGGCCCGGCTTTTCCACACAGGTTGACCGCA +
Preference number: 6 (lower is better)
Translates to: LDSSFEKAALPSSMS*PLAPGPAFPHRLTA
Trigger: TGCGGTCAACCTGTGTGGAAAAGCCGGGCCCGGGGCCAAGGGCAAGGACATGGAGGAGGGCAAGGCCGCCTTCTCGAAAGATGAGTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000528590.5
ENST00000531044.5
ENST00000533073.5
ENST00000533226.2
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
CDS CAA 90 bp GCTTCTACGGGGCCCTTCTCGGGCTCCGTCAGTGGCGTGGTCTCGTaGGGCTCTGTGTGTTTCCCTCCATCATGGTTTGGGGTCCTCTCC +
Preference number: 6 (lower is better)
Translates to: ASTGPFSGSVSGVVS*GSVCFPPSWFGVLS
Trigger: GGAGAGGACCCCAAACCATGATGGAGGGAAACACACAGAGCCCAACGAGACCACGCCACTGACGGAGCCCGAGAAGGGCCCCGTAGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000316851.12
ENST00000528590.5
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
CDS CAA 90 bp GTAGTGTCGGCAGGCAGCTCGGGCTCCGTCAGTGGCGTGGTCTCGTaGGGCTCTGTGTGTTTCCCTCCATCATGGTTTGGGGTCCTCTCC +
Preference number: 6 (lower is better)
Translates to: VVSAGSSGSVSGVVS*GSVCFPPSWFGVLS
Trigger: GGAGAGGACCCCAAACCATGATGGAGGGAAACACACAGAGCCCAACGAGACCACGCCACTGACGGAGCCCGAGCTGCCTGCCGACACTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528158.2
ENST00000611284.4
CDS CAA 90 bp GAGCTAGCAGATGCCGGTGGAGGAGGGCTATGGACTGGCTGCGTCTaGAACTCGGAGGCCGCGCTGATCTCACCCAGCCCTTTGCCATTG +
Preference number: 6 (lower is better)
Translates to: ELADAGGGGLWTGCV*NSEAALISPSPLPL
Trigger: CAATGGCAAAGGGCTGGGTGAGATCAGCGCGGCCTCCGAGTTCAAGACGCAGCCAGTCCATAGCCCTCCTCCACCGGCATCTGCTAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526322.5
ENST00000528590.5
ENST00000531817.5
ENST00000621518.4
ENST00000621850.4
CDS TCA 72 bp CGGCAGCCGAGCTGCGTTCACGCGCTGATCGGAGAATaGGTGACAGTCCCAGCCTCAGCACACTCGCAACTC +
Preference number: 6 (lower is better)
Translates to: RQPSCVHALIGE*VTVPASAHSQL
Trigger: GAGTTGCGAGTGTGCTGAGGCTGGGACTGTCACTCATTCTCCGATCAGCGCGTGAACGCAGCTCGGCTGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000401611.6
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
CDS GCA 72 bp CGCTGGCTTCGTTTCTGTCTCCTGGCACTCTGGCTTTaGTTCTACGGGGCCCTTCTCGGGCTCCGTCAGTGG +
Preference number: 6 (lower is better)
Translates to: RWLRFCLLALWL*FYGALLGLRQW
Trigger: CCACTGACGGAGCCCGAGAAGGGCCCCGTAGAAGCAAAGCCAGAGTGCCAGGAGACAGAAACGAAGCCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316851.12
ENST00000528590.5
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
CDS CCA 72 bp GGCCCTTCTCGGGCTCCGTCAGTGGCGTGGTCTCGTTaGGCTCTGTGTGTTTCCCTCCATCATGGTTTGGGG +
Preference number: 6 (lower is better)
Translates to: GPSRAPSVAWSR*ALCVSLHHGLG
Trigger: CCCCAAACCATGATGGAGGGAAACACACAGAGCCCAACGAGACCACGCCACTGACGGAGCCCGAGAAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000316851.12
ENST00000528590.5
ENST00000531044.5
ENST00000533073.5
ENST00000533226.2
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
CDS CCA 72 bp CTTTGCTTCTACGGGGCCCTTCTCGGGCTCCGTCAGTaGCGTGGTCTCGTTGGGCTCTGTGTGTTTCCCTCC +
Preference number: 6 (lower is better)
Translates to: LCFYGALLGLRQ*RGLVGLCVFPS
Trigger: GGAGGGAAACACACAGAGCCCAACGAGACCACGCCACTGACGGAGCCCGAGAAGGGCCCCGTAGAAGCAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316851.12
ENST00000528590.5
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
CDS CCA 72 bp CAGGCAGCTCGGGCTCCGTCAGTGGCGTGGTCTCGTTaGGCTCTGTGTGTTTCCCTCCATCATGGTTTGGGG +
Preference number: 6 (lower is better)
Translates to: QAARAPSVAWSR*ALCVSLHHGLG
Trigger: CCCCAAACCATGATGGAGGGAAACACACAGAGCCCAACGAGACCACGCCACTGACGGAGCCCGAGCTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528158.2
ENST00000611284.4
CDS CAA 72 bp TCGGCATCGCACACCAGGGTGACGGACTGGCCGAGGTaGGCGGTGGCATTCACAATATTCTGCCTGGCCTGG +
Preference number: 6 (lower is better)
Translates to: SASHTRVTDWPR*AVAFTIFCLAW
Trigger: CCAGGCCAGGCAGAATATTGTGAATGCCACCGCCAACCTCGGCCAGTCCGTCACCCTGGTGTGCGATGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000529356.5
ENST00000531044.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CAA 72 bp TTAGGTGCACTGGGTTCCCCTTGGACTGGCTGCGTCTaGAACTCGGAGGCCGCGCTGATCTCACCCAGCCCT +
Preference number: 6 (lower is better)
Translates to: LGALGSPWTGCV*NSEAALISPSP
Trigger: AGGGCTGGGTGAGATCAGCGCGGCCTCCGAGTTCAAGACGCAGCCAGTCCAAGGGGAACCCAGTGCACCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000611284.4
ENST00000619839.4
ENST00000621128.4
CDS CAA 72 bp GGGCCCTTCTCGGGCTCCGTCAGTGGCGTGGTCTCGTaGGGCTCTGTGTGTTTCCCTCCATCATGGTTTGGG +
Preference number: 6 (lower is better)
Translates to: GPFSGSVSGVVS*GSVCFPPSWFG
Trigger: CCCAAACCATGATGGAGGGAAACACACAGAGCCCAACGAGACCACGCCACTGACGGAGCCCGAGAAGGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000316851.12
ENST00000528590.5
ENST00000531044.5
ENST00000533073.5
ENST00000533226.2
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
CDS CAA 72 bp GCGCTGGCTTCGTTTCTGTCTCCTGGCACTCTGGCTTaGCTTCTACGGGGCCCTTCTCGGGCTCCGTCAGTG +
Preference number: 6 (lower is better)
Translates to: ALASFLSPGTLA*LLRGPSRAPSV
Trigger: CACTGACGGAGCCCGAGAAGGGCCCCGTAGAAGCAAAGCCAGAGTGCCAGGAGACAGAAACGAAGCCAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316851.12
ENST00000528590.5
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
CDS CAA 72 bp GCAGGCAGCTCGGGCTCCGTCAGTGGCGTGGTCTCGTaGGGCTCTGTGTGTTTCCCTCCATCATGGTTTGGG +
Preference number: 6 (lower is better)
Translates to: AGSSGSVSGVVS*GSVCFPPSWFG
Trigger: CCCAAACCATGATGGAGGGAAACACACAGAGCCCAACGAGACCACGCCACTGACGGAGCCCGAGCTGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528158.2
ENST00000611284.4
CDS CAA 90 bp GGGAAGCCTTCGGCATCGCACACCAGGGTGACGGACTGGCCGAGGTaGGCGGTGGCATTCACAATATTCTGCCTGGCCTGGATGGTAGGT +
Preference number: 6 (lower is better)
Translates to: GKPSASHTRVTDWPR*AVAFTIFCLAWMVG
Trigger: ACCTACCATCCAGGCCAGGCAGAATATTGTGAATGCCACCGCCAACCTCGGCCAGTCCGTCACCCTGGTGTGCGATGCCGAAGGCTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000529356.5
ENST00000531044.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS GCA 72 bp ATGGGCACCCCACCTGTGGCCTCTGGTTCATCAAACTaGACCTGGGCTGTGCTGGAGTATGGCTCCACCTGG +
Preference number: 6 (lower is better)
Translates to: MGTPPVASGSSN*TWAVLEYGSTW
Trigger: CCAGGTGGAGCCATACTCCAGCACAGCCCAGGTGCAGTTTGATGAACCAGAGGCCACAGGTGGGGTGCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000526322.5
ENST00000528590.5
ENST00000530543.5
ENST00000531044.5
ENST00000531817.5
ENST00000533073.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS GCA 72 bp CGCTGGCTTCGTTTCTGTCTCCTGGCACTCTGGCTTTaGTTCTACGGGGCCCTTCTCGGTCTTTGCTGGCGC +
Preference number: 6 (lower is better)
Translates to: RWLRFCLLALWL*FYGALLGLCWR
Trigger: GCGCCAGCAAAGACCGAGAAGGGCCCCGTAGAAGCAAAGCCAGAGTGCCAGGAGACAGAAACGAAGCCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS CCA 72 bp GGGAAGCCTTCGGCATCGCACACCAGGGTGACGGACTaGCCGAGGTTGGCGGTGGCATTCACAATATTCTGC +
Preference number: 6 (lower is better)
Translates to: GKPSASHTRVTD*PRLAVAFTIFC
Trigger: GCAGAATATTGTGAATGCCACCGCCAACCTCGGCCAGTCCGTCACCCTGGTGTGCGATGCCGAAGGCTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000529356.5
ENST00000531044.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CCA 72 bp CTGTTCCCCATCCTTTGTCCAGCTCATGGTGGGCTCTaGGAAGCCTTCGGCATCGCACACCAGGGTGACGGA +
Preference number: 6 (lower is better)
Translates to: LFPILCPAHGGL*EAFGIAHQGDG
Trigger: TCCGTCACCCTGGTGTGCGATGCCGAAGGCTTCCCAGAGCCCACCATGAGCTGGACAAAGGATGGGGAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000529356.5
ENST00000531044.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CCA 72 bp CTTCTACGGGGCCCTTCTCGGGCTCCGTCAGTGGCGTaGTCTCGTTGGGCTCTGTGTGTTTCCCTCCATCAT +
Preference number: 6 (lower is better)
Translates to: LLRGPSRAPSVA*SRWALCVSLHH
Trigger: ATGATGGAGGGAAACACACAGAGCCCAACGAGACCACGCCACTGACGGAGCCCGAGAAGGGCCCCGTAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316851.12
ENST00000528590.5
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
CDS CCA 72 bp GGCGTCATTGGGGACCGTCTTGACTTCGGCTGGCGCTaGCTTCGTTTCTGTCTCCTGGCACTCTGGCTTTGC +
Preference number: 6 (lower is better)
Translates to: GVIGDRLDFGWR*LRFCLLALWLC
Trigger: GCAAAGCCAGAGTGCCAGGAGACAGAAACGAAGCCAGCGCCAGCCGAAGTCAAGACGGTCCCCAATGACGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000528590.5
ENST00000531044.5
ENST00000533073.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
CDS CCA 72 bp CTGTGTGGCGTCATTGGGGACCGTCTTGACTTCGGCTaGCGCTGGCTTCGTTTCTGTCTCCTGGCACTCTGG +
Preference number: 6 (lower is better)
Translates to: LCGVIGDRLDFG*RWLRFCLLALW
Trigger: CCAGAGTGCCAGGAGACAGAAACGAAGCCAGCGCCAGCCGAAGTCAAGACGGTCCCCAATGACGCCACACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000528590.5
ENST00000531044.5
ENST00000533073.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
CDS CCA 72 bp GCGGGGCAATACTGGAGGTCAGGGTGGTGGTCTCACTaGTGGGGCTGTTCTGAGCAGTGGCAAAGGTTTCGG +
Preference number: 6 (lower is better)
Translates to: AGQYWRSGWWSH*WGCSEQWQRFR
Trigger: CCGAAACCTTTGCCACTGCTCAGAACAGCCCCACCAGTGAGACCACCACCCTGACCTCCAGTATTGCCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS CCA 72 bp GGCTGGCGCTGGCTTCGTTTCTGTCTCCTGGCACTCTaGCTTTGCTTCTACGGGGCCCTTCTCGGTCTTTGC +
Preference number: 6 (lower is better)
Translates to: GWRWLRFCLLAL*LCFYGALLGLC
Trigger: GCAAAGACCGAGAAGGGCCCCGTAGAAGCAAAGCCAGAGTGCCAGGAGACAGAAACGAAGCCAGCGCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS CCA 72 bp TGGATGCTCTTCAGGGTCAGCGACGACACACGGGCATaGCTACGCACCACCATGTGCCCATCCAGAGTCTGC +
Preference number: 6 (lower is better)
Translates to: WMLFRVSDDTRA*LRTTMCPSRVC
Trigger: GCAGACTCTGGATGGGCACATGGTGGTGCGTAGCCATGCCCGTGTGTCGTCGCTGACCCTGAAGAGCATCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534046.2
CDS CAA 72 bp CTCTCCTCCTCCGTTCGAACCTCCACGATGGGCTCCTaGGACTCATCTTTCGAGAAGGCGGCCTTGCCCTCC +
Preference number: 6 (lower is better)
Translates to: LSSSVRTSTMGS*DSSFEKAALPS
Trigger: GGAGGGCAAGGCCGCCTTCTCGAAAGATGAGTCCAAGGAGCCCATCGTGGAGGTTCGAACGGAGGAGGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000528590.5
ENST00000531044.5
ENST00000533073.5
ENST00000533226.2
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
CDS CAA 72 bp GCGCTGGCTTCGTTTCTGTCTCCTGGCACTCTGGCTTaGCTTCTACGGGGCCCTTCTCGGTCTTTGCTGGCG +
Preference number: 6 (lower is better)
Translates to: ALASFLSPGTLA*LLRGPSRSLLA
Trigger: CGCCAGCAAAGACCGAGAAGGGCCCCGTAGAAGCAAAGCCAGAGTGCCAGGAGACAGAAACGAAGCCAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS CAA 72 bp GCGCTGGCTTCGTTTCTGTCTCCTGGCACTCTGGCTTaGCTTCTACGGGGCCCTTCTGGTGGGGCTGTTCTG +
Preference number: 6 (lower is better)
Translates to: ALASFLSPGTLA*LLRGPSGGAVL
Trigger: CAGAACAGCCCCACCAGAAGGGCCCCGTAGAAGCAAAGCCAGAGTGCCAGGAGACAGAAACGAAGCCAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611284.4
CDS CAA 90 bp TTTGGGGTCCTCTCCTCCTCCGTTCGAACCTCCACGATGGGCTCCTaGGACTCATCTTTCGAGAAGGCGGCCTTGCCCTCCTCCATGTCC +
Preference number: 6 (lower is better)
Translates to: FGVLSSSVRTSTMGS*DSSFEKAALPSSMS
Trigger: GGACATGGAGGAGGGCAAGGCCGCCTTCTCGAAAGATGAGTCCAAGGAGCCCATCGTGGAGGTTCGAACGGAGGAGGAGAGGACCCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000528590.5
ENST00000531044.5
ENST00000533073.5
ENST00000533226.2
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
CDS CAA 90 bp GTGGCGTGGTCTCGTTGGGCTCTGTGTGTTTCCCTCCATCATGGTTaGGGGTCCTCTCCTCCTCCGTTCGAACCTCCACGATGGGCTCCT +
Preference number: 6 (lower is better)
Translates to: VAWSRWALCVSLHHG*GSSPPPFEPPRWAP
Trigger: AGGAGCCCATCGTGGAGGTTCGAACGGAGGAGGAGAGGACCCCAAACCATGATGGAGGGAAACACACAGAGCCCAACGAGACCACGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000528590.5
ENST00000531044.5
ENST00000533073.5
ENST00000533226.2
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
CDS TCA 72 bp CGGCGTACGTTGTTTCGGGCTTCAGGCCCACGATGGTaGCGATGCCCTCCATGCTGGCTTCCTTGGCATCAT +
Preference number: 6 (lower is better)
Translates to: RRTLFRASGPRW*RCPPCWLPWHH
Trigger: ATGATGCCAAGGAAGCCAGCATGGAGGGCATCGTCACCATCGTGGGCCTGAAGCCCGAAACAACGTACGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000525355.5
ENST00000526322.5
ENST00000528590.5
ENST00000530543.5
ENST00000531044.5
ENST00000531817.5
ENST00000533073.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS GCA 72 bp AGCGACGACACACGGGCATGGCTACGCACCACCATGTaGCCATCCAGAGTCTCTTGCTTCTCTGGTCGAGTC +
Preference number: 6 (lower is better)
Translates to: SDDTRAWLRTTM*PSRVSCFSGRV
Trigger: GACTCGACCAGAGAAGCAAGAGACTCTGGATGGGCACATGGTGGTGCGTAGCCATGCCCGTGTGTCGTCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316851.12
ENST00000615112.4
CDS GCA 72 bp CGGTGCAGATGTACTCTCCGGCATCAGTGTACTGGATaGTCTTCAGGGTCAGCGACGACACACGGGCATGGC +
Preference number: 6 (lower is better)
Translates to: RCRCTLRHQCTG*SSGSATTHGHG
Trigger: GCCATGCCCGTGTGTCGTCGCTGACCCTGAAGAGCATCCAGTACACTGATGCCGGAGAGTACATCTGCACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000531044.5
ENST00000534046.2
ENST00000611284.4
ENST00000613217.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS GCA 72 bp TGGACTGGGAGTCCTGGCCGATGGTGTTGCTGGCGGTaGAGATGTACTCTCCGGCATCAGTGTACTGGATGC +
Preference number: 6 (lower is better)
Translates to: WTGSPGRWCCWR*RCTLRHQCTGC
Trigger: GCATCCAGTACACTGATGCCGGAGAGTACATCTGCACCGCCAGCAACACCATCGGCCAGGACTCCCAGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000531044.5
ENST00000534046.2
ENST00000611284.4
ENST00000613217.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS GCA 72 bp GTTTCCATCCTCTCCCATCTGCCCTTCGAGCTTAGGTaGACTGGGTTCCCGTGGAGGAGGGCTATGGACTGG +
Preference number: 6 (lower is better)
Translates to: VSILSHLPFELR*TGFPWRRAMDW
Trigger: CCAGTCCATAGCCCTCCTCCACGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGGAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530543.5
CDS CCA 72 bp GCTCTATCTGTTCCCCATCCTTTGTCCAGCTCATGGTaGGCTCTGGGAAGCCTTCGGCATCGCACACCAGGG +
Preference number: 6 (lower is better)
Translates to: ALSVPHPLSSSW*ALGSLRHRTPG
Trigger: CCCTGGTGTGCGATGCCGAAGGCTTCCCAGAGCCCACCATGAGCTGGACAAAGGATGGGGAACAGATAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000529356.5
ENST00000531044.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CCA 72 bp TGGATGCTCTTCAGGGTCAGCGACGACACACGGGCATaGCTACGCACCACCATGTGCCCATCCAGAGTCTCT +
Preference number: 6 (lower is better)
Translates to: WMLFRVSDDTRA*LRTTMCPSRVS
Trigger: AGAGACTCTGGATGGGCACATGGTGGTGCGTAGCCATGCCCGTGTGTCGTCGCTGACCCTGAAGAGCATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316851.12
ENST00000615112.4
CDS CCA 72 bp CTGGCGGTGCAGATGTACTCTCCGGCATCAGTGTACTaGATGCTCTTCAGGGTCAGCGACGACACACGGGCA +
Preference number: 6 (lower is better)
Translates to: LAVQMYSPASVY*MLFRVSDDTRA
Trigger: TGCCCGTGTGTCGTCGCTGACCCTGAAGAGCATCCAGTACACTGATGCCGGAGAGTACATCTGCACCGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000531044.5
ENST00000534046.2
ENST00000611284.4
ENST00000613217.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CCA 72 bp TCTCCTCCTCCGTTCGAACCTCCACGATGGGCTCCTTaGACTCATCTTTCGAGAAGGCGGCCTTGCCCTCCT +
Preference number: 6 (lower is better)
Translates to: SPPPFEPPRWAP*THLSRRRPCPP
Trigger: AGGAGGGCAAGGCCGCCTTCTCGAAAGATGAGTCCAAGGAGCCCATCGTGGAGGTTCGAACGGAGGAGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000528590.5
ENST00000531044.5
ENST00000533073.5
ENST00000533226.2
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
CDS CCA 72 bp TTGGGGTCCTCTCCTCCTCCGTTCGAACCTCCACGATaGGCTCCTTGGACTCATCTTTCGAGAAGGCGGCCT +
Preference number: 6 (lower is better)
Translates to: LGSSPPPFEPPR*APWTHLSRRRP
Trigger: AGGCCGCCTTCTCGAAAGATGAGTCCAAGGAGCCCATCGTGGAGGTTCGAACGGAGGAGGAGAGGACCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000528590.5
ENST00000531044.5
ENST00000533073.5
ENST00000533226.2
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
CDS CCA 72 bp TTGACTTCGGCTGGCGCTGGCTTCGTTTCTGTCTCCTaGCACTCTGGCTTTGCTTCTACGGGGCCCTTCTCG +
Preference number: 6 (lower is better)
Translates to: LTSAGAGFVSVS*HSGFASTGPFS
Trigger: CGAGAAGGGCCCCGTAGAAGCAAAGCCAGAGTGCCAGGAGACAGAAACGAAGCCAGCGCCAGCCGAAGTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000528590.5
ENST00000531044.5
ENST00000533073.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
CDS CCA 72 bp CATCTGCCCTTCGAGCTTAGGTGCACTGGGTTCCCGTaGAGGAGGGCTATGGACTGGCTGCGTCTTGAACTC +
Preference number: 6 (lower is better)
Translates to: HLPFELRCTGFP*RRAMDWLRLEL
Trigger: GAGTTCAAGACGCAGCCAGTCCATAGCCCTCCTCCACGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530543.5
CDS CCA 72 bp TTGACTTCGGCTGGCGCTGGCTTCGTTTCTGTCTCCTaGCACTCTGGCTTTGCTTCTACGGGGCCCTTCTGG +
Preference number: 6 (lower is better)
Translates to: LTSAGAGFVSVS*HSGFASTGPFW
Trigger: CCAGAAGGGCCCCGTAGAAGCAAAGCCAGAGTGCCAGGAGACAGAAACGAAGCCAGCGCCAGCCGAAGTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611284.4
CDS CCA 72 bp AGCCTCAGCACACTCGCAACTCGGAGATCCTTGCGCTaGCCCGGGTTCGTTTTGATGGAACTGGGATGGGAG +
Preference number: 6 (lower is better)
Translates to: SLSTLATRRSLR*PGFVLMELGWE
Trigger: CTCCCATCCCAGTTCCATCAAAACGAACCCGGGCCAGCGCAAGGATCTCCGAGTTGCGAGTGTGCTGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621518.4
CDS CCA 72 bp TGGATGCTCTTCAGGGTCAGCGACGACACACGGGCATaGCTACGCACCACCATGTGCCCATCCAGAGTCTCA +
Preference number: 6 (lower is better)
Translates to: WMLFRVSDDTRA*LRTTMCPSRVS
Trigger: TGAGACTCTGGATGGGCACATGGTGGTGCGTAGCCATGCCCGTGTGTCGTCGCTGACCCTGAAGAGCATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615285.4
ENST00000619839.4
CDS CAA 72 bp AGTCCCAGCCTCAGCACACTCGCAACTCGGAGATCCTaGCGCTGGCCCGGGTTCGTTTTGATGGAACTGGGA +
Preference number: 6 (lower is better)
Translates to: SPSLSTLATRRS*RWPGFVLMELG
Trigger: TCCCAGTTCCATCAAAACGAACCCGGGCCAGCGCAAGGATCTCCGAGTTGCGAGTGTGCTGAGGCTGGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621518.4
CDS CAA 90 bp ATGAGTGACAGTCCCAGCCTCAGCACACTCGCAACTCGGAGATCCTaGCGCTGGCCCGGGTTCGTTTTGATGGAACTGGGATGGGAGCGA +
Preference number: 6 (lower is better)
Translates to: MSDSPSLSTLATRRS*RWPGFVLMELGWER
Trigger: TCGCTCCCATCCCAGTTCCATCAAAACGAACCCGGGCCAGCGCAAGGATCTCCGAGTTGCGAGTGTGCTGAGGCTGGGACTGTCACTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621518.4
CDS TCA 72 bp CGTTGGCTGGGATGGCTGTGGGCTGGGCCGAGGTCCTaGACACAAAATGAGCCGCCTTGGATTTTCCTTGCT +
Preference number: 6 (lower is better)
Translates to: RWLGWLWAGPRS*TQNEPPWIFLA
Trigger: AGCAAGGAAAATCCAAGGCGGCTCATTTTGTGTTCAGGACCTCGGCCCAGCCCACAGCCATCCCAGCCAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000528590.5
ENST00000531044.5
ENST00000533073.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000620046.4
CDS GCA 72 bp CAAGGTACATGGACTGGGAGTCCTGGCCGATGGTGTTaGTGGCGGTGCAGATGTACTCTCCGGCATCAGTGT +
Preference number: 6 (lower is better)
Translates to: QGTWTGSPGRWC*WRCRCTLRHQC
Trigger: ACACTGATGCCGGAGAGTACATCTGCACCGCCAGCAACACCATCGGCCAGGACTCCCAGTCCATGTACCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000531044.5
ENST00000534046.2
ENST00000611284.4
ENST00000613217.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS GCA 72 bp CTGTGGCCTCTGGTTCATCAAACTGCACCTGGGCTGTaGTGGAGTATGGCTCCACCTGGTCGATGGATGGTG +
Preference number: 6 (lower is better)
Translates to: LWPLVHQTAPGL*WSMAPPGRWMV
Trigger: CACCATCCATCGACCAGGTGGAGCCATACTCCAGCACAGCCCAGGTGCAGTTTGATGAACCAGAGGCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000526322.5
ENST00000528590.5
ENST00000530543.5
ENST00000531044.5
ENST00000531817.5
ENST00000533073.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS GCA 72 bp GTTTCCATCCTCTCCCATCTGCCCTTCGAGCTTAGGTaGACTGGGTTCCCGGACTGGCTGCGTCTTGAACTC +
Preference number: 6 (lower is better)
Translates to: VSILSHLPFELR*TGFPDWLRLEL
Trigger: GAGTTCAAGACGCAGCCAGTCCGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401611.6
ENST00000525355.5
ENST00000533073.5
CDS GCA 72 bp GTTTCCATCCTCTCCCATCTGCCCTTCGAGCTTAGGTaGACTGGGTTCCCCTTCTGTTCACCAGCGTGGACG +
Preference number: 6 (lower is better)
Translates to: VSILSHLPFELR*TGFPFCSPAWT
Trigger: CGTCCACGCTGGTGAACAGAAGGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534516.2
CDS GCA 72 bp GTTTCCATCCTCTCCCATCTGCCCTTCGAGCTTAGGTaGACTGGGTTCCCCTGGGACTGGCTGCGTCTTGAA +
Preference number: 6 (lower is better)
Translates to: VSILSHLPFELR*TGFPWDWLRLE
Trigger: TTCAAGACGCAGCCAGTCCCAGGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS CCA 72 bp CCTGGGCTGTGCTGGAGTATGGCTCCACCTGGTCGATaGATGGTGAAGAGGGGGTGTCTGCTTGAACAAGGA +
Preference number: 6 (lower is better)
Translates to: PGLCWSMAPPGR*MVKRGCLLEQG
Trigger: TCCTTGTTCAAGCAGACACCCCCTCTTCACCATCCATCGACCAGGTGGAGCCATACTCCAGCACAGCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000526322.5
ENST00000530543.5
ENST00000531044.5
ENST00000531817.5
ENST00000533073.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CCA 72 bp GTGGTCTCGTTGGGCTCTGTGTGTTTCCCTCCATCATaGTTTGGGGTCCTCTCCTCCTCCGTTCGAACCTCC +
Preference number: 6 (lower is better)
Translates to: VVSLGSVCFPPS*FGVLSSSVRTS
Trigger: GGAGGTTCGAACGGAGGAGGAGAGGACCCCAAACCATGATGGAGGGAAACACACAGAGCCCAACGAGACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000528590.5
ENST00000531044.5
ENST00000533073.5
ENST00000533226.2
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
CDS CCA 72 bp TGGATGCTCTTCAGGGTCAGCGACGACACACGGGCATaGCTACGCACCACCATGTGCCCATCCAGAGTCTTT +
Preference number: 6 (lower is better)
Translates to: WMLFRVSDDTRA*LRTTMCPSRVF
Trigger: AAAGACTCTGGATGGGCACATGGTGGTGCGTAGCCATGCCCGTGTGTCGTCGCTGACCCTGAAGAGCATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000401611.6
ENST00000531044.5
ENST00000611284.4
ENST00000613217.4
ENST00000618266.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CCA 72 bp ACACCAGCAGGGGCGCTTGGGCTGAGGACAGCCCCTTaGTTAGCCAGGACACTAGAAGACAAATTGCTAGCG +
Preference number: 6 (lower is better)
Translates to: TPAGALGLRTAP*LARTLEDKLLA
Trigger: CGCTAGCAATTTGTCTTCTAGTGTCCTGGCTAACCAAGGGGCTGTCCTCAGCCCAAGCGCCCCTGCTGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS CCA 72 bp CATGACGTGGTCACTGCCAGACGGGAGCCTGATCTCTaGTTTCCACTCGGAGGAGAGCTTCTGGGAGAAACC +
Preference number: 6 (lower is better)
Translates to: HDVVTARREPDL*FPLGGELLGET
Trigger: GGTTTCTCCCAGAAGCTCTCCTCCGAGTGGAAACCAGAGATCAGGCTCCCGTCTGGCAGTGACCACGTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530090.1
CDS CAA 72 bp TCAAGGTACATGGACTGGGAGTCCTGGCCGATGGTGTaGCTGGCGGTGCAGATGTACTCTCCGGCATCAGTG +
Preference number: 6 (lower is better)
Translates to: SRYMDWESWPMV*LAVQMYSPASV
Trigger: CACTGATGCCGGAGAGTACATCTGCACCGCCAGCAACACCATCGGCCAGGACTCCCAGTCCATGTACCTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000531044.5
ENST00000534046.2
ENST00000611284.4
ENST00000613217.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CAA 90 bp TTGCTCTCGTTCTCCTTTGTCTGTGTGGCGTCATTGGGGACCGTCTaGACTTCGGCTGGCGCTGGCTTCGTTTCTGTCTCCTGGCACTCT +
Preference number: 6 (lower is better)
Translates to: LLSFSFVCVASLGTV*TSAGAGFVSVSWHS
Trigger: AGAGTGCCAGGAGACAGAAACGAAGCCAGCGCCAGCCGAAGTCAAGACGGTCCCCAATGACGCCACACAGACAAAGGAGAACGAGAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000528590.5
ENST00000531044.5
ENST00000533073.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
CDS GCA 72 bp GTTTCCATCCTCTCCCATCTGCCCTTCGAGCTTAGGTaGACTGGGTTCCCCTTGGACTGGCTGCGTCTTGAA +
Preference number: 6 (lower is better)
Translates to: VSILSHLPFELR*TGFPLDWLRLE
Trigger: TTCAAGACGCAGCCAGTCCAAGGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000611284.4
ENST00000619839.4
ENST00000621128.4
CDS GCA 72 bp AGGTGCACTGGGTTCCCCTGTAGCTGGTTCTGTGGTTaGAAGGGCAGGAAGAGGCCAAGTTGTATCTGGTGG +
Preference number: 6 (lower is better)
Translates to: RCTGFPCSWFCG*KGRKRPSCIWW
Trigger: CCACCAGATACAACTTGGCCTCTTCCTGCCCTTGCAACCACAGAACCAGCTACAGGGGAACCCAGTGCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621518.4
CDS GCA 72 bp GTTTCCATCCTCTCCCATCTGCCCTTCGAGCTTAGGTaGACTGGGTTCCCCTGTAGCTGGTTCTGTGGTTGC +
Preference number: 6 (lower is better)
Translates to: VSILSHLPFELR*TGFPCSWFCGC
Trigger: GCAACCACAGAACCAGCTACAGGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621518.4
CDS CCA 72 bp TGGCCTCTGGTTCATCAAACTGCACCTGGGCTGTGCTaGAGTATGGCTCCACCTGGTCGATGGATGGTGAAG +
Preference number: 6 (lower is better)
Translates to: WPLVHQTAPGLC*SMAPPGRWMVK
Trigger: CTTCACCATCCATCGACCAGGTGGAGCCATACTCCAGCACAGCCCAGGTGCAGTTTGATGAACCAGAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000526322.5
ENST00000528590.5
ENST00000530543.5
ENST00000531044.5
ENST00000531817.5
ENST00000533073.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CCA 72 bp CTCGTTGGGCTCTGTGTGTTTCCCTCCATCATGGTTTaGGGTCCTCTCCTCCTCCGTTCGAACCTCCACGAT +
Preference number: 6 (lower is better)
Translates to: LVGLCVFPSIMV*GPLLLRSNLHD
Trigger: ATCGTGGAGGTTCGAACGGAGGAGGAGAGGACCCCAAACCATGATGGAGGGAAACACACAGAGCCCAACGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000528590.5
ENST00000531044.5
ENST00000533073.5
ENST00000533226.2
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
CDS CAA 72 bp TCTCGTTGGGCTCTGTGTGTTTCCCTCCATCATGGTTaGGGGTCCTCTCCTCCTCCGTTCGAACCTCCACGA +
Preference number: 6 (lower is better)
Translates to: SRWALCVSLHHG*GSSPPPFEPPR
Trigger: TCGTGGAGGTTCGAACGGAGGAGGAGAGGACCCCAAACCATGATGGAGGGAAACACACAGAGCCCAACGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000528590.5
ENST00000531044.5
ENST00000533073.5
ENST00000533226.2
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
CDS CAA 90 bp ACCCATCATGCTTTGCTCTCGTTCTCCTTTGTCTGTGTGGCGTCATaGGGGACCGTCTTGACTTCGGCTGGCGCTGGCTTCGTTTCTGTC +
Preference number: 6 (lower is better)
Translates to: THHALLSFSFVCVAS*GTVLTSAGAGFVSV
Trigger: GACAGAAACGAAGCCAGCGCCAGCCGAAGTCAAGACGGTCCCCAATGACGCCACACAGACAAAGGAGAACGAGAGCAAAGCATGATGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000528590.5
ENST00000531044.5
ENST00000533073.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS TCA 72 bp ATTGGAGCTTGGCAGCAGCTGGCCATCCCGAAACCATaGGATCGTGGCACTGGGATAGGCAAATACCTCGCA +
Preference number: 6 (lower is better)
Translates to: IGAWQQLAIPKP*DRGTGIGKYLA
Trigger: TGCGAGGTATTTGCCTATCCCAGTGCCACGATCTCATGGTTTCGGGATGGCCAGCTGCTGCCAAGCTCCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000531044.5
ENST00000534046.2
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS TCA 72 bp CTAGCGAGGAGCAGGGCTCTCTCTAACGTCAAACCTTaGGACTGTGCACCTGCCAAACCCTGCAGTTCAGGT +
Preference number: 6 (lower is better)
Translates to: LARSRALSNVKP*DCAPAKPCSSG
Trigger: ACCTGAACTGCAGGGTTTGGCAGGTGCACAGTCTCAAGGTTTGACGTTAGAGAGAGCCCTGCTCCTCGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525691.5
CDS GCA 72 bp GACTGGCCGAGGTTGGCGGTGGCATTCACAATATTCTaGCTGGCCTGGATGGTAGGTGGCACATTCACAATG +
Preference number: 6 (lower is better)
Translates to: DWPRLAVAFTIF*LAWMVGGTFTM
Trigger: CATTGTGAATGTGCCACCTACCATCCAGGCCAGGCAGAATATTGTGAATGCCACCGCCAACCTCGGCCAGTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000529356.5
ENST00000531044.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS GCA 72 bp CTTAGGTGCACTGGGTTCCCTAGCTGGTTCTGTGGTTaGAAGGGCAGGAAGAGGCCAAGTTGTATCTGGTGG +
Preference number: 6 (lower is better)
Translates to: LRCTGFPSWFCG*KGRKRPSCIWW
Trigger: CCACCAGATACAACTTGGCCTCTTCCTGCCCTTGCAACCACAGAACCAGCTAGGGAACCCAGTGCACCTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526322.5
CDS GCA 72 bp AGGTGCACTGGGTTCCCCTTTAGCTGGTTCTGTGGTTaGAAGGGCAGGAAGAGGCCAAGTTGTATCTGGTGG +
Preference number: 6 (lower is better)
Translates to: RCTGFPFSWFCG*KGRKRPSCIWW
Trigger: CCACCAGATACAACTTGGCCTCTTCCTGCCCTTGCAACCACAGAACCAGCTAAAGGGGAACCCAGTGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621850.4
CDS GCA 72 bp GTTTCCATCCTCTCCCATCTGCCCTTCGAGCTTAGGTaGACTGGGTTCCCCTTTAGCTGGTTCTGTGGTTGC +
Preference number: 6 (lower is better)
Translates to: VSILSHLPFELR*TGFPFSWFCGC
Trigger: GCAACCACAGAACCAGCTAAAGGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621850.4
CDS CCA 72 bp CTTAGGTGCACTGGGTTCCCCTTCTGTTCACCAGCGTaGACGACATCATCAGCACCATGCAAGCCACATGAC +
Preference number: 6 (lower is better)
Translates to: LRCTGFPFCSPA*TTSSAPCKPHD
Trigger: GTCATGTGGCTTGCATGGTGCTGATGATGTCGTCCACGCTGGTGAACAGAAGGGGAACCCAGTGCACCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534516.2
CDS CAA 72 bp ACTTTGAGGTGGATGGTCGCATCCTGCTCGCCAGCCTaGTTCTCAGCAATGCAGATGTACTCAGCCTCGTCG +
Preference number: 6 (lower is better)
Translates to: TLRWMVASCSPA*FSAMQMYSASS
Trigger: CGACGAGGCTGAGTACATCTGCATTGCTGAGAACAAGGCTGGCGAGCAGGATGCGACCATCCACCTCAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000529356.5
ENST00000531044.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CAA 90 bp TATTGCACTTCAAGGTACATGGACTGGGAGTCCTGGCCGATGGTGTaGCTGGCGGTGCAGATGTACTCTCCGGCATCAGTGTACTGGATG +
Preference number: 6 (lower is better)
Translates to: YCTSRYMDWESWPMV*LAVQMYSPASVYWM
Trigger: CATCCAGTACACTGATGCCGGAGAGTACATCTGCACCGCCAGCAACACCATCGGCCAGGACTCCCAGTCCATGTACCTTGAAGTGCAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000531044.5
ENST00000534046.2
ENST00000611284.4
ENST00000613217.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS GCA 72 bp TGGTCGCATCCTGCTCGCCAGCCTTGTTCTCAGCAATaGAGATGTACTCAGCCTCGTCGTTCTTATCCACCT +
Preference number: 6 (lower is better)
Translates to: WSHPARQPCSQQ*RCTQPRRSYPP
Trigger: AGGTGGATAAGAACGACGAGGCTGAGTACATCTGCATTGCTGAGAACAAGGCTGGCGAGCAGGATGCGACCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000529356.5
ENST00000531044.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS GCA 72 bp GTTTCCATCCTCTCCCATCTGCCCTTCGAGCTTAGGTaGACTGGGTTCCCCTTTATCTGGTGGAGACAATGG +
Preference number: 6 (lower is better)
Translates to: VSILSHLPFELR*TGFPFIWWRQW
Trigger: CCATTGTCTCCACCAGATAAAGGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525691.5
ENST00000528590.5
CDS GCA 72 bp GTTTCCATCCTCTCCCATCTGCCCTTCGAGCTTAGGTaGACTGGGTTCCCCTGCAGTTCCCAGGAAAAACAA +
Preference number: 6 (lower is better)
Translates to: VSILSHLPFELR*TGFPCSSQEKQ
Trigger: TTGTTTTTCCTGGGAACTGCAGGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGGAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620046.4
CDS CCA 72 bp CACGGCATCTTCCCCCTCCCGGAACTCCTGTGGGGTTaGCGCATTCTTGAACATGAGCTTCTGAAAGATCTT +
Preference number: 6 (lower is better)
Translates to: HGIFPLPELLWG*RILEHELLKDL
Trigger: AAGATCTTTCAGAAGCTCATGTTCAAGAATGCGCCAACCCCACAGGAGTTCCGGGAGGGGGAAGATGCCGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000525973.5
ENST00000529356.5
ENST00000531044.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CCA 72 bp CACAATCACGGCATCTTCCCCCTCCCGGAACTCCTGTaGGGTTGGCGCATTCTTGAACATGAGCTTCTGAAA +
Preference number: 6 (lower is better)
Translates to: HNHGIFPLPELL*GWRILEHELLK
Trigger: TTTCAGAAGCTCATGTTCAAGAATGCGCCAACCCCACAGGAGTTCCGGGAGGGGGAAGATGCCGTGATTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000525973.5
ENST00000529356.5
ENST00000531044.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CCA 72 bp GACATCTCGGCCTTTGTGTTTCCAGATGATGGTTGGTaGGAGGGAGCTGACCACATCACACACAATCACGGC +
Preference number: 6 (lower is better)
Translates to: DISAFVFPDDGW*EGADHITHNHG
Trigger: GCCGTGATTGTGTGTGATGTGGTCAGCTCCCTCCCACCAACCATCATCTGGAAACACAAAGGCCGAGATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000525973.5
ENST00000529356.5
ENST00000531044.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CCA 72 bp TTTGTATTTGAGGATGGGCACCCCACCTGTGGCCTCTaGTTCATCAAACTGCACCTGGGCTGTGCTGGAGTA +
Preference number: 6 (lower is better)
Translates to: FVFEDGHPTCGL*FIKLHLGCAGV
Trigger: TACTCCAGCACAGCCCAGGTGCAGTTTGATGAACCAGAGGCCACAGGTGGGGTGCCCATCCTCAAATACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000526322.5
ENST00000528590.5
ENST00000530543.5
ENST00000531044.5
ENST00000531817.5
ENST00000533073.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS TCA 72 bp AAATGCCGGCGTCGTCGATGTTGGCGTTATAGATGGTaGGGGTGGAGGAGGAATCATCATTCCACACCACTG +
Preference number: 6 (lower is better)
Translates to: KCRRRRCWRYRW*GWRRNHHSTPL
Trigger: CAGTGGTGTGGAATGATGATTCCTCCTCCACCCTCACCATCTATAACGCCAACATCGACGACGCCGGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000525973.5
ENST00000529356.5
ENST00000531044.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS TCA 72 bp GAGCTTCTGAAAGATCTTCACGTTGACGGTGGCCTCTaGCTCACTGCCATCCTCGCCTGTAACCACACACTT +
Preference number: 6 (lower is better)
Translates to: ELLKDLHVDGGL*LTAILACNHTL
Trigger: AAGTGTGTGGTTACAGGCGAGGATGGCAGTGAGTCAGAGGCCACCGTCAACGTGAAGATCTTTCAGAAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000525973.5
ENST00000529356.5
ENST00000531044.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS TCA 72 bp CCTCCAGATAGCTGGCAGAGGGGGTGTTGTAGATCTTaGTATTGCTGTAATTGGAGCTTGGCAGCAGCTGGC +
Preference number: 6 (lower is better)
Translates to: PPDSWQRGCCRS*YCCNWSLAAAG
Trigger: GCCAGCTGCTGCCAAGCTCCAATTACAGCAATATCAAGATCTACAACACCCCCTCTGCCAGCTATCTGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000530543.5
ENST00000531044.5
ENST00000534046.2
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS TCA 72 bp TGGATGGTGAAGAGGGGGTGTCTGCTTGAACAAGGATaGATTCCAAGGACTCCTGCCCAATGCGGTTCACTG +
Preference number: 6 (lower is better)
Translates to: WMVKRGCLLEQG*IPRTPAQCGSL
Trigger: CAGTGAACCGCATTGGGCAGGAGTCCTTGGAATTCATCCTTGTTCAAGCAGACACCCCCTCTTCACCATCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000526322.5
ENST00000530543.5
ENST00000531044.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS TCA 72 bp TGTGCTGGAGTATGGCTCCACCTGGTCGATGGATGGTaGAGAGGGGGTGTCTGCTTGAACAAGGATGAATTC +
Preference number: 6 (lower is better)
Translates to: CAGVWLHLVDGW*RGGVCLNKDEF
Trigger: GAATTCATCCTTGTTCAAGCAGACACCCCCTCTTCACCATCCATCGACCAGGTGGAGCCATACTCCAGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000526322.5
ENST00000530543.5
ENST00000531044.5
ENST00000531817.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS GCA 72 bp AGGTTCACTTTAATAGAGTTTCCATCCTCTCCCATCTaGCCTTCGAGCTTAGGTGCACTGGGTTCCCCTGGG +
Preference number: 6 (lower is better)
Translates to: RFTLIEFPSSPI*PSSLGALGSPG
Trigger: CCCAGGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGGAAACTCTATTAAAGTGAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS CAA 72 bp ACTTCTTCACCAACTGCTCTCCACTCAGCTTTGTATTaGAGGATGGGCACCCCACCTGTGGCCTCTGGTTCA +
Preference number: 6 (lower is better)
Translates to: TSSPTALHSALY*RMGTPPVASGS
Trigger: TGAACCAGAGGCCACAGGTGGGGTGCCCATCCTCAAATACAAAGCTGAGTGGAGAGCAGTTGGTGAAGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000526322.5
ENST00000528590.5
ENST00000530543.5
ENST00000531044.5
ENST00000531817.5
ENST00000533073.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CAA 72 bp TGCCATACTTCTTCACCAACTGCTCTCCACTCAGCTTaGTATTTGAGGATGGGCACCCCACCTGTGGCCTCT +
Preference number: 6 (lower is better)
Translates to: CHTSSPTALHSA*YLRMGTPPVAS
Trigger: AGAGGCCACAGGTGGGGTGCCCATCCTCAAATACAAAGCTGAGTGGAGAGCAGTTGGTGAAGAAGTATGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000526322.5
ENST00000528590.5
ENST00000530543.5
ENST00000531044.5
ENST00000531817.5
ENST00000533073.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CAA 90 bp GAATGCCATACTTCTTCACCAACTGCTCTCCACTCAGCTTTGTATTaGAGGATGGGCACCCCACCTGTGGCCTCTGGTTCATCAAACTGC +
Preference number: 6 (lower is better)
Translates to: ECHTSSPTALHSALY*RMGTPPVASGSSNC
Trigger: GCAGTTTGATGAACCAGAGGCCACAGGTGGGGTGCCCATCCTCAAATACAAAGCTGAGTGGAGAGCAGTTGGTGAAGAAGTATGGCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000526322.5
ENST00000528590.5
ENST00000530543.5
ENST00000531044.5
ENST00000531817.5
ENST00000533073.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CAA 90 bp CACTTGGAATGCCATACTTCTTCACCAACTGCTCTCCACTCAGCTTaGTATTTGAGGATGGGCACCCCACCTGTGGCCTCTGGTTCATCA +
Preference number: 6 (lower is better)
Translates to: HLECHTSSPTALHSA*YLRMGTPPVASGSS
Trigger: TGATGAACCAGAGGCCACAGGTGGGGTGCCCATCCTCAAATACAAAGCTGAGTGGAGAGCAGTTGGTGAAGAAGTATGGCATTCCAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000526322.5
ENST00000528590.5
ENST00000530543.5
ENST00000531044.5
ENST00000531817.5
ENST00000533073.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CAA 90 bp CCCTGCAGTTCCCAGGAAAAACAAAGTCCAGATGAGATCCTTAGTTaGCAGCATTGTAATCTGCTGGCTGGGAGGGATGTTCTTGCCGCG +
Preference number: 6 (lower is better)
Translates to: PCSSQEKQSPDEILS*QHCNLLAGRDVLAA
Trigger: CGCGGCAAGAACATCCCTCCCAGCCAGCAGATTACAATGCTGCAAACTAAGGATCTCATCTGGACTTTGTTTTTCCTGGGAACTGCAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620046.4
CDS GCA 72 bp GGTTTTGCAAAGACTTTGAGGTGGATGGTCGCATCCTaGTCGCCAGCCTTGTTCTCAGCAATGCAGATGTAC +
Preference number: 6 (lower is better)
Translates to: GFAKTLRWMVAS*SPALFSAMQMY
Trigger: GTACATCTGCATTGCTGAGAACAAGGCTGGCGAGCAGGATGCGACCATCCACCTCAAAGTCTTTGCAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000529356.5
ENST00000531044.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS GCA 72 bp AGGTTCACTTTAATAGAGTTTCCATCCTCTCCCATCTaGCCTTCGAGCTTAGGTGCACTGGGTTCCCCTTGG +
Preference number: 6 (lower is better)
Translates to: RFTLIEFPSSPI*PSSLGALGSPW
Trigger: CCAAGGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGGAAACTCTATTAAAGTGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316851.12
ENST00000531044.5
ENST00000611284.4
ENST00000619839.4
ENST00000621128.4
CDS GCA 72 bp AGGTTCACTTTAATAGAGTTTCCATCCTCTCCCATCTaGCCTTCGAGCTTAGGTGCACTGGGTTCCCGGACT +
Preference number: 6 (lower is better)
Translates to: RFTLIEFPSSPI*PSSLGALGSRT
Trigger: AGTCCGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGGAAACTCTATTAAAGTGAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401611.6
ENST00000525355.5
ENST00000533073.5
CDS GCA 72 bp AGGTTCACTTTAATAGAGTTTCCATCCTCTCCCATCTaGCCTTCGAGCTTAGGTGCACTGGGTTCCCGTGGA +
Preference number: 6 (lower is better)
Translates to: RFTLIEFPSSPI*PSSLGALGSRG
Trigger: TCCACGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGGAAACTCTATTAAAGTGAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530543.5
CDS GCA 72 bp AGGTTCACTTTAATAGAGTTTCCATCCTCTCCCATCTaGCCTTCGAGCTTAGGTGCACTGGGTTCCCCTGCA +
Preference number: 6 (lower is better)
Translates to: RFTLIEFPSSPI*PSSLGALGSPA
Trigger: TGCAGGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGGAAACTCTATTAAAGTGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620046.4
CDS CCA 72 bp TGCCCTCCATGCTGGCTTCCTTGGCATCATACCACTTaGAATGCCATACTTCTTCACCAACTGCTCTCCACT +
Preference number: 6 (lower is better)
Translates to: CPPCWLPWHHTT*NAILLHQLLST
Trigger: AGTGGAGAGCAGTTGGTGAAGAAGTATGGCATTCCAAGTGGTATGATGCCAAGGAAGCCAGCATGGAGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000525355.5
ENST00000526322.5
ENST00000528590.5
ENST00000530543.5
ENST00000531044.5
ENST00000531817.5
ENST00000533073.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CCA 72 bp CCTCCCTCAACAATGCAGGACAACAGCAGGGCTGTCTaGGTATGGGTTCCTCTTCTTGTAATACCTTCTCCT +
Preference number: 6 (lower is better)
Translates to: PPSTMQDNSRAV*VWVPLLVIPSP
Trigger: AGGAGAAGGTATTACAAGAAGAGGAACCCATACCCAGACAGCCCTGCTGTTGTCCTGCATTGTTGAGGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611284.4
CDS CAA 90 bp ACCTGCAGTTCCCAGGAAAAACAAAGTCCAGATGAGATCCTTAGTTaGCAGCATTGTAATCTGCTGGCTGGGAGGGATGTTCTTGCCGCG +
Preference number: 6 (lower is better)
Translates to: TCSSQEKQSPDEILS*QHCNLLAGRDVLAA
Trigger: CGCGGCAAGAACATCCCTCCCAGCCAGCAGATTACAATGCTGCAAACTAAGGATCTCATCTGGACTTTGTTTTTCCTGGGAACTGCAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615525.1
ENST00000617166.1
CDS CAA 90 bp TGCTGCAGTTCCCAGGAAAAACAAAGTCCAGATGAGATCCTTAGTTaGCAGCATTGTAATCTGCTGGCTGGGAGGGATGTTCTTGCCGCG +
Preference number: 6 (lower is better)
Translates to: CCSSQEKQSPDEILS*QHCNLLAGRDVLAA
Trigger: CGCGGCAAGAACATCCCTCCCAGCCAGCAGATTACAATGCTGCAAACTAAGGATCTCATCTGGACTTTGTTTTTCCTGGGAACTGCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613217.4
CDS GCA 72 bp TCCATGCTGGCTTCCTTGGCATCATACCACTTGGAATaGCATACTTCTTCACCAACTGCTCTCCACTCAGCT +
Preference number: 6 (lower is better)
Translates to: SMLASLASYHLE*HTSSPTALHSA
Trigger: AGCTGAGTGGAGAGCAGTTGGTGAAGAAGTATGGCATTCCAAGTGGTATGATGCCAAGGAAGCCAGCATGGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000526322.5
ENST00000528590.5
ENST00000530543.5
ENST00000531044.5
ENST00000531817.5
ENST00000533073.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS GCA 72 bp AGGTTCACTTTAATAGAGTTTCCATCCTCTCCCATCTaGCCTTCGAGCTTAGGTGCACTGGGTTCCCTAGCT +
Preference number: 6 (lower is better)
Translates to: RFTLIEFPSSPI*PSSLGALGSLA
Trigger: AGCTAGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGGAAACTCTATTAAAGTGAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526322.5
CDS CCA 72 bp AAGAAGAATTTGGACTCTCCAACGCTGATCTCCCCCTaGCTGGGAACAATATCCACCTGCAGAGAAACTGCA +
Preference number: 6 (lower is better)
Translates to: KKNLDSPTLISP*LGTISTCRETA
Trigger: TGCAGTTTCTCTGCAGGTGGATATTGTTCCCAGCCAGGGGGAGATCAGCGTTGGAGAGTCCAAATTCTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000529356.5
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CAA 90 bp AACTGCAGTTCCCAGGAAAAACAAAGTCCAGATGAGATCCTTAGTTaGCAGCATTGTAATCTGCTGGCTGGGAGGGATGTTCTTGCCGCG +
Preference number: 6 (lower is better)
Translates to: NCSSQEKQSPDEILS*QHCNLLAGRDVLAA
Trigger: CGCGGCAAGAACATCCCTCCCAGCCAGCAGATTACAATGCTGCAAACTAAGGATCTCATCTGGACTTTGTTTTTCCTGGGAACTGCAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000529356.5
ENST00000531044.5
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS TCA 72 bp AGCGTGGACGACATCATCAGCACCATGCAAGCCACATaGCAAAGTCACATGATACGCACGCACATGATATTG +
Preference number: 6 (lower is better)
Translates to: SVDDIISTMQAT*QSHMIRTHMIL
Trigger: CAATATCATGTGCGTGCGTATCATGTGACTTTGTCATGTGGCTTGCATGGTGCTGATGATGTCGTCCACGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534516.2
CDS GCA 72 bp TCGTCGCTGAAGATGTACTTCTCATCGTCTTCCTCTTaGTCTATCTGTTCCCCATCCTTTGTCCAGCTCATG +
Preference number: 6 (lower is better)
Translates to: SSLKMYFSSSSS*SICSPSFVQLM
Trigger: CATGAGCTGGACAAAGGATGGGGAACAGATAGAGCAAGAGGAAGACGATGAGAAGTACATCTTCAGCGACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000529356.5
ENST00000531044.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS GCA 72 bp AGGTTCACTTTAATAGAGTTTCCATCCTCTCCCATCTaGCCTTCGAGCTTAGGTGCACTGGGTTCCCCTTTA +
Preference number: 6 (lower is better)
Translates to: RFTLIEFPSSPI*PSSLGALGSPL
Trigger: TAAAGGGGAACCCAGTGCACCTAAGCTCGAAGGGCAGATGGGAGAGGATGGAAACTCTATTAAAGTGAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525691.5
ENST00000528590.5
ENST00000621850.4
CDS GCA 72 bp GTGATTCTGTGCAATGTTTTTAGCTGGTTCTGTGGTTaGAAGGGCAGGAAGAGGCCAAGTTGTATCTGGTGG +
Preference number: 6 (lower is better)
Translates to: VILCNVFSWFCG*KGRKRPSCIWW
Trigger: CCACCAGATACAACTTGGCCTCTTCCTGCCCTTGCAACCACAGAACCAGCTAAAAACATTGCACAGAATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531817.5
CDS CCA 72 bp GCCTCGTCGTTCTTATCCACCTTTTTGATGGTCAGCTaGGAACTATCGTCGCTGAAGATGTACTTCTCATCG +
Preference number: 6 (lower is better)
Translates to: ASSFLSTFLMVS*ELSSLKMYFSS
Trigger: CGATGAGAAGTACATCTTCAGCGACGATAGTTCCCAGCTGACCATCAAAAAGGTGGATAAGAACGACGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000529356.5
ENST00000531044.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CCA 72 bp CTAATGGGGGAGGCACTGGGAAGCAGCATGAGAACCTaGGAGTATCCGAAACAGAAAATGAGACTCAGTTAT +
Preference number: 6 (lower is better)
Translates to: LMGEALGSSMRT*EYPKQKMRLSY
Trigger: ATAACTGAGTCTCATTTTCTGTTTCGGATACTCCCAGGTTCTCATGCTGCTTCCCAGTGCCTCCCCCATTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534046.2
CDS CAA 72 bp CAGATGTACTCAGCCTCGTCGTTCTTATCCACCTTTTaGATGGTCAGCTGGGAACTATCGTCGCTGAAGATG +
Preference number: 6 (lower is better)
Translates to: QMYSASSFLSTF*MVSWELSSLKM
Trigger: CATCTTCAGCGACGATAGTTCCCAGCTGACCATCAAAAAGGTGGATAAGAACGACGAGGCTGAGTACATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000529356.5
ENST00000531044.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CAA 90 bp TCAGCAATGCAGATGTACTCAGCCTCGTCGTTCTTATCCACCTTTTaGATGGTCAGCTGGGAACTATCGTCGCTGAAGATGTACTTCTCA +
Preference number: 6 (lower is better)
Translates to: SAMQMYSASSFLSTF*MVSWELSSLKMYFS
Trigger: TGAGAAGTACATCTTCAGCGACGATAGTTCCCAGCTGACCATCAAAAAGGTGGATAAGAACGACGAGGCTGAGTACATCTGCATTGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000529356.5
ENST00000531044.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CCA 72 bp AAGAAGAATTTGGACTCTCCAACGCTGATCTCCCCCTaGCTGGGAACAATATCCACCTGCAGAGAAACTTTT +
Preference number: 6 (lower is better)
Translates to: KKNLDSPTLISP*LGTISTCRETF
Trigger: AAAAGTTTCTCTGCAGGTGGATATTGTTCCCAGCCAGGGGGAGATCAGCGTTGGAGAGTCCAAATTCTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525973.5
ENST00000611284.4
CDS CAA 72 bp TTTGATCTTTGCTCGGTTCTCTTCACCCATCATGCTTaGCTCTCGTTCTCCTTTGTCTGTGTGGCGTCATTG +
Preference number: 6 (lower is better)
Translates to: FDLCSVLFTHHA*LSFSFVCVASL
Trigger: CAATGACGCCACACAGACAAAGGAGAACGAGAGCAAAGCATGATGGGTGAAGAGAACCGAGCAAAGATCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000316851.12
ENST00000528158.2
ENST00000528590.5
ENST00000531044.5
ENST00000533073.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
CDS GCA 72 bp GATGAATTCCAAGGACTCCTGCCCAATGCGGTTCACTaGAGTACAGTTGTAGTTCCCAAAATCATTCTCAGA +
Preference number: 6 (lower is better)
Translates to: DEFQGLLPNAVH*STVVVPKIILR
Trigger: TCTGAGAATGATTTTGGGAACTACAACTGTACTGCAGTGAACCGCATTGGGCAGGAGTCCTTGGAATTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000526322.5
ENST00000530543.5
ENST00000531044.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS GCA 72 bp ATCATACCACTTGGAATGCCATACTTCTTCACCAACTaGTCTCCACTCAGCTTTGTATTTGAGGATGGGCAC +
Preference number: 6 (lower is better)
Translates to: IIPLGMPYFFTN*SPLSFVFEDGH
Trigger: GTGCCCATCCTCAAATACAAAGCTGAGTGGAGAGCAGTTGGTGAAGAAGTATGGCATTCCAAGTGGTATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000526322.5
ENST00000528590.5
ENST00000530543.5
ENST00000531044.5
ENST00000531817.5
ENST00000533073.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CAA 72 bp TCCCAGGAAAAACAAAGTCCAGATGAGATCCTTAGTTaGCAGCATTGTAATCTGCTGGCTGGGAGGGATGTT +
Preference number: 6 (lower is better)
Translates to: SQEKQSPDEILS*QHCNLLAGRDV
Trigger: AACATCCCTCCCAGCCAGCAGATTACAATGCTGCAAACTAAGGATCTCATCTGGACTTTGTTTTTCCTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000529356.5
ENST00000531044.5
ENST00000613217.4
ENST00000615112.4
ENST00000615285.4
ENST00000615525.1
ENST00000617166.1
ENST00000618266.4
ENST00000619839.4
ENST00000620046.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CAA 72 bp TCTCCATTGGGGGAGAACCAGGAGATGTCTTTATCTTaGGCATCTCCTGCCACTTGGCATAAGAAGAATTTG +
Preference number: 6 (lower is better)
Translates to: SPLGENQEMSLS*ASPATWHKKNL
Trigger: CAAATTCTTCTTATGCCAAGTGGCAGGAGATGCCAAAGATAAAGACATCTCCTGGTTCTCCCCCAATGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000316851.12
ENST00000401611.6
ENST00000525973.5
ENST00000529356.5
ENST00000531044.5
ENST00000611284.4
ENST00000615112.4
ENST00000615285.4
ENST00000618266.4
ENST00000619839.4
ENST00000621128.4
ENST00000621518.4
ENST00000621850.4
CDS CCA 72 bp CAGGGCTGCAAAAACATCCTTTGCAAGGTCAATATCTaGGGTCTTGAAGTTCCCTTCGTCCATTTTAAAGTC +
Preference number: 6 (lower is better)
Translates to: QGCKNILCKVNI*GLEVPFVHFKV
Trigger: GACTTTAAAATGGACGAAGGGAACTTCAAGACCCCAGATATTGACCTTGCAAAGGATGTTTTTGCAGCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528158.2
CDS CAA 90 bp AAGAGAAGGCTCTTTAGCATCTACCCAAGGACTTCCCTCCTGAGCTaGTCTTTTCTTAGCTGTGGATTCTGTTACTACAAACACATAGGA +
Preference number: 6 (lower is better)
Translates to: KRRLFSIYPRTSLLS*SFLSCGFCYYKHIG
Trigger: TCCTATGTGTTTGTAGTAACAGAATCCACAGCTAAGAAAAGACAAGCTCAGGAGGGAAGTCCTTGGGTAGATGCTAAAGAGCCTTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611284.4
CDS TCA 72 bp ACAAAGTCACATGATACGCACGCACATGATATTGGTTaGAAGGAAAGTGGAGGAGGTCACATGGAAAATACA +
Preference number: 6 (lower is better)
Translates to: TKSHDTHAHDIG*KESGGGHMENT
Trigger: TGTATTTTCCATGTGACCTCCTCCACTTTCCTTTCAACCAATATCATGTGCGTGCGTATCATGTGACTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534516.2
CDS CAA 90 bp CAGAGAAACTTTTTGTTGCGATGTGAAACAGATGAAGGAATTTCATaGCAACAGAACACAGCAGCACATCATCAGGTTGGAAAGCAAAGC +
Preference number: 6 (lower is better)
Translates to: QRNFLLRCETDEGIS*QQNTAAHHQVGKQS
Trigger: GCTTTGCTTTCCAACCTGATGATGTGCTGCTGTGTTCTGTTGCAATGAAATTCCTTCATCTGTTTCACATCGCAACAAAAAGTTTCTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611284.4
CDS CAA 72 bp GATGTGAAATCCATCAGCCAAACACCAATACGAGAATaGAGGTCCTCACAATCCATCACTTTTTCTCTTAAA +
Preference number: 6 (lower is better)
Translates to: DVKSISQTPIRE*RSSQSITFSLK
Trigger: TTTAAGAGAAAAAGTGATGGATTGTGAGGACCTCAATTCTCGTATTGGTGTTTGGCTGATGGATTTCACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615525.1