RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NCALD (Homo sapiens)

Ensembl gene IDs: ENSG00000104490

Ensembl transcript IDs: ENST00000220931.11, ENST00000311028.4, ENST00000395923.5, ENST00000517531.5, ENST00000517822.5, ENST00000518166.5, ENST00000518661.5, ENST00000518727.5, ENST00000518952.5, ENST00000519098.5, ENST00000519508.6, ENST00000520346.1, ENST00000520425.5, ENST00000520690.5, ENST00000521371.1, ENST00000521599.5, ENST00000521957.1, ENST00000521964.5, ENST00000522078.5, ENST00000522206.5, ENST00000522252.5, ENST00000522448.5, ENST00000522754.1, ENST00000522951.5, ENST00000523645.5, ENST00000523923.5, ENST00000524101.1, ENST00000524137.5, ENST00000524209.5

Found 681 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTaGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGT +
Preference number: 1 (lower is better)
Translates to: SQLAGIASPQRVTCS*GIQHPVPSITPTAR
Trigger: ACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
3UTR TCA 90 bp AAGCACCATGCCGCCAGTCTAATGCTGTCAATGGGCTGCTGGGCCTaGGAGGGAAACCACCCTACTGGTCCCCTGTCATACATGTTAACA +
Preference number: 1 (lower is better)
Translates to: KHHAASLMLSMGCWA*EGNHPTGPLSYMLT
Trigger: TGTTAACATGTATGACAGGGGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGACAGCATTAGACTGGCGGCATGGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR GCA 90 bp GGAAACCACCCTACTGGTCCCCTGTCATACATGTTAACATTCCTGTaGTCCAATTGTCCTGTCCCACTACCACCTGCTCTGCATCTGCCC +
Preference number: 1 (lower is better)
Translates to: GNHPTGPLSYMLTFL*SNCPVPLPPALHLP
Trigger: GGGCAGATGCAGAGCAGGTGGTAGTGGGACAGGACAATTGGAGCACAGGAATGTTAACATGTATGACAGGGGACCAGTAGGGTGGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR CCA 90 bp AACAATGAACACCACGAAGTCTGTCCATGCTCTCCACAAGCACACTaGGGCTCTGGGCATTCCCACGAAGCATCCACGACAAAAGAAGCT +
Preference number: 1 (lower is better)
Translates to: NNEHHEVCPCSPQAH*GSGHSHEASTTKEA
Trigger: AGCTTCTTTTGTCGTGGATGCTTCGTGGGAATGCCCAGAGCCCCAGTGTGCTTGTGGAGAGCATGGACAGACTTCGTGGTGTTCATTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR CCA 90 bp AATGCTGTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTaGTCCCCTGTCATACATGTTAACATTCCTGTGCTCCAATTGTCC +
Preference number: 1 (lower is better)
Translates to: NAVNGLLGLRGKPPY*SPVIHVNIPVLQLS
Trigger: GGACAATTGGAGCACAGGAATGTTAACATGTATGACAGGGGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGACAGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR GCA 90 bp TCCTGTGCTCCAATTGTCCTGTCCCACTACCACCTGCTCTGCATCTaGCCTCTAGGCATGGCCACTCTGGAAATGCATTCAAAATTAAAG +
Preference number: 1 (lower is better)
Translates to: SCAPIVLSHYHLLCI*PLGMATLEMHSKLK
Trigger: CTTTAATTTTGAATGCATTTCCAGAGTGGCCATGCCTAGAGGGCAGATGCAGAGCAGGTGGTAGTGGGACAGGACAATTGGAGCACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR CCA 90 bp ACAGGGTCAGTGGCAGGCCAGGACAGGGACTATTTCTATACATTCTaGAAGTGTCGGCATTCATCAGCCTGCATGTGGCTCACTTTTCTT +
Preference number: 1 (lower is better)
Translates to: TGSVAGQDRDYFYTF*KCRHSSACMWLTFL
Trigger: AAGAAAAGTGAGCCACATGCAGGCTGATGAATGCCGACACTTCCAGAATGTATAGAAATAGTCCCTGTCCTGGCCTGCCACTGACCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR CCA 90 bp GGAGAAGGAGAAAAACAACCTCCGAGAAAATACAGACAGGGTCAGTaGCAGGCCAGGACAGGGACTATTTCTATACATTCTGGAAGTGTC +
Preference number: 1 (lower is better)
Translates to: GEGEKQPPRKYRQGQ*QARTGTISIHSGSV
Trigger: GACACTTCCAGAATGTATAGAAATAGTCCCTGTCCTGGCCTGCCACTGACCCTGTCTGTATTTTCTCGGAGGTTGTTTTTCTCCTTCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR GCA 90 bp AGGGACTATTTCTATACATTCTGGAAGTGTCGGCATTCATCAGCCTaGATGTGGCTCACTTTTCTTTCTGGAATAGCCGGAGACCTCTAC +
Preference number: 1 (lower is better)
Translates to: RDYFYTFWKCRHSSA*MWLTFLSGIAGDLY
Trigger: GTAGAGGTCTCCGGCTATTCCAGAAAGAAAAGTGAGCCACATGCAGGCTGATGAATGCCGACACTTCCAGAATGTATAGAAATAGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR CCA 90 bp TCAGGTCGTAAGCCACTTTATTCCAGTCCCTTGAACATCACAGGCTaGTTTTATTTGGGACAGAACAGGTTTTATTTCCAAAGGTCCCTG +
Preference number: 1 (lower is better)
Translates to: SGRKPLYSSPLNITG*FYLGQNRFYFQRSL
Trigger: CAGGGACCTTTGGAAATAAAACCTGTTCTGTCCCAAATAAAACCAGCCTGTGATGTTCAAGGGACTGGAATAAAGTGGCTTACGACCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR TCA 90 bp CTCTGTAGAATCCTTCAGGTCGTAAGCCACTTTATTCCAGTCCCTTaGACATCACAGGCTGGTTTTATTTGGGACAGAACAGGTTTTATT +
Preference number: 1 (lower is better)
Translates to: LCRILQVVSHFIPVP*TSQAGFIWDRTGFI
Trigger: AATAAAACCTGTTCTGTCCCAAATAAAACCAGCCTGTGATGTTCAAGGGACTGGAATAAAGTGGCTTACGACCTGAAGGATTCTACAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR GCA 90 bp AACCACAGACACACTTGCCCATGTCTTTATGATGAATTTGATGACTaGCCAACCTCTGATTCTTTAACAGGGGCAGGGAAACTGAATATT +
Preference number: 1 (lower is better)
Translates to: NHRHTCPCLYDEFDD*PTSDSLTGAGKLNI
Trigger: AATATTCAGTTTCCCTGCCCCTGTTAAAGAATCAGAGGTTGGGCAGTCATCAAATTCATCATAAAGACATGGGCAAGTGTGTCTGTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000521599.5
3UTR GCA 90 bp AAACAGCAACTCAGACTTGTGCTGTCACTTCTGGAAATAGAAGTCTaGATTCAAAGAGCACGGCAATGGAAAATACTTTTGGATTCTCCA +
Preference number: 1 (lower is better)
Translates to: KQQLRLVLSLLEIEV*IQRARQWKILLDSP
Trigger: TGGAGAATCCAAAAGTATTTTCCATTGCCGTGCTCTTTGAATGCAGACTTCTATTTCCAGAAGTGACAGCACAAGTCTGAGTTGCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR GCA 90 bp TGGATTTGGTTCTTTTTGGTCTACCATACAAATTTGGATTTCTGCTaGCAATTACAGCAGACTCAAGTCATATATAAAAACCTGGAGGTT +
Preference number: 1 (lower is better)
Translates to: WIWFFLVYHTNLDFC*QLQQTQVIYKNLEV
Trigger: AACCTCCAGGTTTTTATATATGACTTGAGTCTGCTGTAATTGGCAGCAGAAATCCAAATTTGTATGGTAGACCAAAAAGAACCAAATCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR CCA 90 bp GTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTGGTCCCCTGTCATAGGGAGTGGGCCCCCATaGGGAAATGTCCCAGCTCGC +
Preference number: 2 (lower is better)
Translates to: VNGLLGLRGKPPYWSPVIGSGPP*GNVPAR
Trigger: GCGAGCTGGGACATTTCCCCATGGGGGCCCACTCCC...TATGACAGGGGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR-3UTR TCA 90 bp TGCCGCCAGTCTAATGCTGTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCCACGACAAAAGAAGCTaGAGGCGTCACGGAGGAAGG +
Preference number: 2 (lower is better)
Translates to: CRQSNAVNGLLGLRGKPPHDKRS*RRHGGR
Trigger: CCTTCCTCCGTGACGCCTTCAGCTTCTTTTGTCGTG...GGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGACAGCATTAGACTGGCGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR-3UTR CCA 90 bp CATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGAGCACACTGGGGCTCTaGGCATTCCCACGAAGCATC +
Preference number: 2 (lower is better)
Translates to: HPVPSITPTARVTTDSGGSTLGL*AFPRSI
Trigger: GATGCTTCGTGGGAATGCCCAGAGCCCCAGTGTGCT...CCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR-3UTR CCA 90 bp GGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATCTCCACAAGCACACTaGGGCTCTGGGCATTCCCAC +
Preference number: 2 (lower is better)
Translates to: GNPASGAIHHPYGTCDNRSPQAH*GSGHSH
Trigger: GTGGGAATGCCCAGAGCCCCAGTGTGCTTGTGGAGA...TCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR-3UTR TCA 90 bp CATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGCACGACAAAAGAAGCTaGAGGCGTCACGGAGGAAGG +
Preference number: 2 (lower is better)
Translates to: HPVPSITPTARVTTDSGGHDKRS*RRHGGR
Trigger: CCTTCCTCCGTGACGCCTTCAGCTTCTTTTGTCGTG...CCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR-3UTR GCA 90 bp GTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTGGTCCCCTGTCATACACTACCACCTGCTCTaGATCTGCCCTCTAGGCATG +
Preference number: 2 (lower is better)
Translates to: VNGLLGLRGKPPYWSPVIHYHLL*ICPLGM
Trigger: CATGCCTAGAGGGCAGATGCAGAGCAGGTGGTAGTG...TATGACAGGGGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR-3UTR CCA 90 bp TCTAATGCTGTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTGGTCCTCTCCACAAGCACACTaGGGCTCTGGGCATTCCCAC +
Preference number: 2 (lower is better)
Translates to: SNAVNGLLGLRGKPPYWSSPQAH*GSGHSH
Trigger: GTGGGAATGCCCAGAGCCCCAGTGTGCTTGTGGAGA...GGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGACAGCATTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR-3UTR CCA 90 bp GTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGTTTAGCACACTGGGGCTCTaGGCATTCCCACGAAGCATC +
Preference number: 2 (lower is better)
Translates to: VPSITPTARVTTDSGGEFSTLGL*AFPRSI
Trigger: GATGCTTCGTGGGAATGCCCAGAGCCCCAGTGTGCT...AAACTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR-3UTR CCA 90 bp GTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGTTTTCTCCACAAGCACACTaGGGCTCTGGGCATTCCCAC +
Preference number: 2 (lower is better)
Translates to: VPSITPTARVTTDSGGEFSPQAH*GSGHSH
Trigger: GTGGGAATGCCCAGAGCCCCAGTGTGCTTGTGGAGA...AAACTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR-3UTR GCA 90 bp AGTGACATAAACCTTGAGGCATGCAGTCTTCTGGGTGCTGTGGAGTCCCTTGGCCACCTGCTCTGCATCTaGCCTCTAGGCATGGCCACT +
Preference number: 2 (lower is better)
Translates to: SDINLEACSLLGAVESLGHLLCI*PLGMAT
Trigger: AGTGGCCATGCCTAGAGGGCAGATGCAGAGCAGGTG...GCCAAGGGACTCCACAGCACCCAGAAGACTGCATGCCTCAAGGTTTATGTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR CCA 90 bp GGGTCAGTGGCAGGCCAGGACAGGGACTATTTCTATACATTCTGGAAGTGTCGGAGCACACTGGGGCTCTaGGCATTCCCACGAAGCATC +
Preference number: 2 (lower is better)
Translates to: GSVAGQDRDYFYTFWKCRSTLGL*AFPRSI
Trigger: GATGCTTCGTGGGAATGCCCAGAGCCCCAGTGTGCT...CCGACACTTCCAGAATGTATAGAAATAGTCCCTGTCCTGGCCTGCCACTGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR TCA 90 bp GGGCCTCCCTTTGCTAACTACTTGCAAGAGTATGACTCGCCTGTAACCAGCAAACCCCTACGGCACGTGTaGCAACAGATTCAGGTGGGG +
Preference number: 2 (lower is better)
Translates to: GPPFANYLQEYDSPVTSKPLRHV*QQIQVG
Trigger: CCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGG...TTTGCTGGTTACAGGCGAGTCATACTCTTGCAAGTAGTTAGCAAAGGGAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR CCA 90 bp GGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGAAATCACAGGACTGGATaGGTTTCCCTTCTTTTGCCC +
Preference number: 2 (lower is better)
Translates to: GNPASGAIHHPYGTCDNRNHRTG*VSLLLP
Trigger: GGGCAAAAGAAGGGAAACCCATCCAGTCCTGTGATT...TCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
3UTR-3UTR CCA 90 bp GAGGGAAACCACCCTACTGGTCCCCTGTCATACATGTTAACATTCCTGTGCTCCGAAACTACAGCCTGCTaGGGAAGAGAGGGGAGTGGG +
Preference number: 2 (lower is better)
Translates to: EGNHPTGPLSYMLTFLCSETTAC*GREGSG
Trigger: CCCACTCCCCTCTCTTCCCCAGCAGGCTGTAGTTTC...GGAGCACAGGAATGTTAACATGTATGACAGGGGACCAGTAGGGTGGTTTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR-3UTR CCA 90 bp AGTGACATAAACCTTGAGGCATGCAGTCTTCTGGGTGCTGTGGAGTCCCTTGGCCAGAGCAGGGAAAAGTaGGATGCAGCTCCTGAGCAC +
Preference number: 2 (lower is better)
Translates to: SDINLEACSLLGAVESLGQSREK*DAAPEH
Trigger: GTGCTCAGGAGCTGCATCCCACTTTTCCCTGCTCTG...GCCAAGGGACTCCACAGCACCCAGAAGACTGCATGCCTCAAGGTTTATGTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR CCA 90 bp TTCTGGGTGCTGTGGAGTCCCTTGGCCAAACTTGAGTGCACTGGATTCGACATACAGAGCAGGGAAAAGTaGGATGCAGCTCCTGAGCAC +
Preference number: 2 (lower is better)
Translates to: FWVLWSPLAKLECTGFDIQSREK*DAAPEH
Trigger: GTGCTCAGGAGCTGCATCCCACTTTTCCCTGCTCTG...TATGTCGAATCCAGTGCACTCAAGTTTGGCCAAGGGACTCCACAGCACCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR TCA 90 bp AAATACAGACAGGGTCAGTGGCAGGCCAGGACAGGGACTATTTCTATACATTCTCCCCTACGGCACGTGTaGCAACAGATTCAGGTGGGG +
Preference number: 2 (lower is better)
Translates to: KYRQGQWQARTGTISIHSPLRHV*QQIQVG
Trigger: CCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGG...AGAATGTATAGAAATAGTCCCTGTCCTGGCCTGCCACTGACCCTGTCTGTATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR GCA 90 bp GGGCCTCCCTTTGCTAACTACTTGCAAGAGTATGACTCGCCTGTAACCAGCAAACACTACCACCTGCTCTaGATCTGCCCTCTAGGCATG +
Preference number: 2 (lower is better)
Translates to: GPPFANYLQEYDSPVTSKHYHLL*ICPLGM
Trigger: CATGCCTAGAGGGCAGATGCAGAGCAGGTGGTAGTG...TTTGCTGGTTACAGGCGAGTCATACTCTTGCAAGTAGTTAGCAAAGGGAGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR TCA 90 bp TCATCAAACAATGAACACCACGAAGTCTGTCCATGCTCTCCACAAGCACACTGGCACGACAAAAGAAGCTaGAGGCGTCACGGAGGAAGG +
Preference number: 2 (lower is better)
Translates to: SSNNEHHEVCPCSPQAHWHDKRS*RRHGGR
Trigger: CCTTCCTCCGTGACGCCTTCAGCTTCTTTTGTCGTG...CCAGTGTGCTTGTGGAGAGCATGGACAGACTTCGTGGTGTTCATTGTTTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR-3UTR TCA 90 bp GGGTCAGTGGCAGGCCAGGACAGGGACTATTTCTATACATTCTGGAAGTGTCGGGAGTCTGCAGAGTATTaGTCTGCTCAGAAAAGCACC +
Preference number: 2 (lower is better)
Translates to: GSVAGQDRDYFYTFWKCRESAEY*SAQKST
Trigger: GGTGCTTTTCTGAGCAGATCAATACTCTGCAGACTC...CCGACACTTCCAGAATGTATAGAAATAGTCCCTGTCCTGGCCTGCCACTGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR GCA 90 bp GACAGGGACTATTTCTATACATTCTGGAAGTGTCGGCATTCATCAGCCTGCATGGAATCCAGCATCCGGTaGCATCCATCACCCCTACGG +
Preference number: 2 (lower is better)
Translates to: DRDYFYTFWKCRHSSACMESSIR*HPSPLR
Trigger: CCGTAGGGGTGATGGATGGCACCGGATGCTGGATTC...CATGCAGGCTGATGAATGCCGACACTTCCAGAATGTATAGAAATAGTCCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR CCA 90 bp GGAAATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGAATCACAGGACTGGATaGGTTTCCCTTCTTTTGCCC +
Preference number: 2 (lower is better)
Translates to: GNVPARWNSLTPEGNLFLNHRTG*VSLLLP
Trigger: GGGCAAAAGAAGGGAAACCCATCCAGTCCTGTGATT...CAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACATTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
3UTR-3UTR CCA 90 bp GACAGGGACTATTTCTATACATTCTGGAAGTGTCGGCATTCATCAGCCTGCATGGAAACTACAGCCTGCTaGGGAAGAGAGGGGAGTGGG +
Preference number: 2 (lower is better)
Translates to: DRDYFYTFWKCRHSSACMETTAC*GREGSG
Trigger: CCCACTCCCCTCTCTTCCCCAGCAGGCTGTAGTTTC...CATGCAGGCTGATGAATGCCGACACTTCCAGAATGTATAGAAATAGTCCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR TCA 90 bp TCTAATGCTGTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTGGTCCAAAATCATCAAACAATaGACACCACGAAGTCTGTCC +
Preference number: 2 (lower is better)
Translates to: SNAVNGLLGLRGKPPYWSKIIKQ*TPRSLS
Trigger: GGACAGACTTCGTGGTGTTCATTGTTTGATGATTTT...GGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGACAGCATTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR-3UTR TCA 90 bp GCTGTCACTTCTGGAAATAGAAGTCTGCATTCAAAGAGCACGGCAATGGAAAATCCCCTACGGCACGTGTaGCAACAGATTCAGGTGGGG +
Preference number: 2 (lower is better)
Translates to: AVTSGNRSLHSKSTAMENPLRHV*QQIQVG
Trigger: CCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGG...ATTTTCCATTGCCGTGCTCTTTGAATGCAGACTTCTATTTCCAGAAGTGACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR GCA 90 bp GGAAATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGAAGCCCCTTGAAGCTTaGAATAGAATCACAGGACTG +
Preference number: 2 (lower is better)
Translates to: GNVPARWNSLTPEGNLFLKPLEA*NRITGL
Trigger: CAGTCCTGTGATTCTATTGCAAGCTTCAAGGGGCTT...CAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
3UTR-3UTR CCA 90 bp TCTAATGCTGTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTGGTCCATAGAATCACAGGACTaGATGGGTTTCCCTTCTTTT +
Preference number: 2 (lower is better)
Translates to: SNAVNGLLGLRGKPPYWSIESQD*MGFPSF
Trigger: AAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTAT...GGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGACAGCATTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR-3UTR CCA 90 bp AACTACTTGCAAGAGTATGACTCGCCTGTAACCAGCAAATTTTTACTCTTAGCTGGGAGTGGGCCCCCATaGGGAAATGTCCCAGCTCGC +
Preference number: 2 (lower is better)
Translates to: NYLQEYDSPVTSKFLLLAGSGPP*GNVPAR
Trigger: GCGAGCTGGGACATTTCCCCATGGGGGCCCACTCCC...AGCTAAGAGTAAAAATTTGCTGGTTACAGGCGAGTCATACTCTTGCAAGTAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR CCA 90 bp TGTCGATTGGTACATTTGTGCAAAGACAGATATGACTTCCAAACAAGACAGACAGGGAGTGGGCCCCCATaGGGAAATGTCCCAGCTCGC +
Preference number: 2 (lower is better)
Translates to: CRLVHLCKDRYDFQTRQTGSGPP*GNVPAR
Trigger: GCGAGCTGGGACATTTCCCCATGGGGGCCCACTCCC...TGTCTGTCTTGTTTGGAAGTCATATCTGTCTTTGCACAAATGTACCAATCGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR CAA 90 bp CTGCCTTCTCTTAGTGGCAAGTTCCCCATCAACAACCTTGAGAATTaGGGCCTCCCTTTGCTAACTACTTGCAAGAGTATGACTCGCCTG +
Preference number: 2 (lower is better)
Translates to: LPSLSGKFPINNLEN*GLPLLTTCKSMTRL
Trigger: CAGGCGAGTCATACTCTTGCAAGTAGTTAGCAAAGGGAGGCCCAAATTCTCAAGGTTGTTGATGGGGAACTTGCCACTAAGAGAAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR GCA 90 bp GAGGGAAACCACCCTACTGGTCCCCTGTCATACATGTTAACATTCCTGTGCTCCAAGCCCCTTGAAGCTTaGAATAGAATCACAGGACTG +
Preference number: 2 (lower is better)
Translates to: EGNHPTGPLSYMLTFLCSKPLEA*NRITGL
Trigger: CAGTCCTGTGATTCTATTGCAAGCTTCAAGGGGCTT...GGAGCACAGGAATGTTAACATGTATGACAGGGGACCAGTAGGGTGGTTTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR-3UTR GCA 90 bp AAATACAGACAGGGTCAGTGGCAGGCCAGGACAGGGACTATTTCTATACATTCTCTCAGAAAAGCACCATaGCGCCAGTCTAATGCTGTC +
Preference number: 2 (lower is better)
Translates to: KYRQGQWQARTGTISIHSLRKAP*RQSNAV
Trigger: GACAGCATTAGACTGGCGGCATGGTGCTTTTCTGAG...AGAATGTATAGAAATAGTCCCTGTCCTGGCCTGCCACTGACCCTGTCTGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR CCA 90 bp AAATACAGACAGGGTCAGTGGCAGGCCAGGACAGGGACTATTTCTATACATTCTGGGAAACCACCCTACTaGTCCCCTGTCATACATGTT +
Preference number: 2 (lower is better)
Translates to: KYRQGQWQARTGTISIHSGKPPY*SPVIHV
Trigger: AACATGTATGACAGGGGACCAGTAGGGTGGTTTCCC...AGAATGTATAGAAATAGTCCCTGTCCTGGCCTGCCACTGACCCTGTCTGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR TCA 90 bp ACGATTAAAAATCATCAAACAATGAACACCACGAAGTCTGTCCATGCTCTCCACCACGACAAAAGAAGCTaGAGGCGTCACGGAGGAAGG +
Preference number: 2 (lower is better)
Translates to: TIKNHQTMNTTKSVHALHHDKRS*RRHGGR
Trigger: CCTTCCTCCGTGACGCCTTCAGCTTCTTTTGTCGTG...GTGGAGAGCATGGACAGACTTCGTGGTGTTCATTGTTTGATGATTTTTAATCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR-3UTR GCA 90 bp AACTACTTGCAAGAGTATGACTCGCCTGTAACCAGCAAATTTTTACTCTTAGCTCACCTGCTCTGCATCTaGCCTCTAGGCATGGCCACT +
Preference number: 2 (lower is better)
Translates to: NYLQEYDSPVTSKFLLLAHLLCI*PLGMAT
Trigger: AGTGGCCATGCCTAGAGGGCAGATGCAGAGCAGGTG...AGCTAAGAGTAAAAATTTGCTGGTTACAGGCGAGTCATACTCTTGCAAGTAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR CCA 90 bp AGGTTTCTCAAAACATTAACTGATTCCACCTACCAAAGGAGAATCAAAGGAAGGAGCACACTGGGGCTCTaGGCATTCCCACGAAGCATC +
Preference number: 2 (lower is better)
Translates to: RFLKTLTDSTYQRRIKGRSTLGL*AFPRSI
Trigger: GATGCTTCGTGGGAATGCCCAGAGCCCCAGTGTGCT...CCTTCCTTTGATTCTCCTTTGGTAGGTGGAATCAGTTAATGTTTTGAGAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR TCA 90 bp AGGTTTCTCAAAACATTAACTGATTCCACCTACCAAAGGAGAATCAAAGGAAGGCAGGGGCAGGGAAACTaGATATTCCAGACCTGGCTC +
Preference number: 2 (lower is better)
Translates to: RFLKTLTDSTYQRRIKGRQGQGN*IFQTWL
Trigger: GAGCCAGGTCTGGAATATTCAGTTTCCCTGCCCCTG...CCTTCCTTTGATTCTCCTTTGGTAGGTGGAATCAGTTAATGTTTTGAGAAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR GCA 90 bp GGCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTCTTGAATCCAGCATCCGGTaGCATCCATCACCCCTACGG +
Preference number: 2 (lower is better)
Translates to: GKTLNLVCITQYVIYSRLESSIR*HPSPLR
Trigger: CCGTAGGGGTGATGGATGGCACCGGATGCTGGATTC...AAGACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
3UTR-3UTR GCA 90 bp TTCTGGGTGCTGTGGAGTCCCTTGGCCAAACTTGAGTGCACTGGATTCGACATAACAAATTTGGATTTCTaGTGCCAATTACAGCAGACT +
Preference number: 2 (lower is better)
Translates to: FWVLWSPLAKLECTGFDITNLDF*CQLQQT
Trigger: AGTCTGCTGTAATTGGCAGCAGAAATCCAAATTTGT...TATGTCGAATCCAGTGCACTCAAGTTTGGCCAAGGGACTCCACAGCACCCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR CCA 90 bp CTGGAAATGCATTCAAAATTAAAGTTGGGCCCTAGTCAGGGTTACTTTGTATTTAGCACACTGGGGCTCTaGGCATTCCCACGAAGCATC +
Preference number: 2 (lower is better)
Translates to: LEMHSKLKLGPSQGYFVFSTLGL*AFPRSI
Trigger: GATGCTTCGTGGGAATGCCCAGAGCCCCAGTGTGCT...AAATACAAAGTAACCCTGACTAGGGCCCAACTTTAATTTTGAATGCATTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR-3UTR CCA 90 bp TGTCGATTGGTACATTTGTGCAAAGACAGATATGACTTCCAAACAAGACAGACAAATGTCCCAGCTCGCTaGAATAGCCTCACCCCAGAG +
Preference number: 2 (lower is better)
Translates to: CRLVHLCKDRYDFQTRQTNVPAR*NSLTPE
Trigger: CTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACATT...TGTCTGTCTTGTTTGGAAGTCATATCTGTCTTTGCACAAATGTACCAATCGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR-3UTR CCA 90 bp TTCTGGGTGCTGTGGAGTCCCTTGGCCAAACTTGAGTGCACTGGATTCGACATAAGATGGGTCTGGTTTTaGAATATGTTACCATTTGTG +
Preference number: 2 (lower is better)
Translates to: FWVLWSPLAKLECTGFDIRWVWF*NMLPFV
Trigger: CACAAATGGTAACATATTCCAAAACCAGACCCATCT...TATGTCGAATCCAGTGCACTCAAGTTTGGCCAAGGGACTCCACAGCACCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR CCA 90 bp GCTGTCACTTCTGGAAATAGAAGTCTGCATTCAAAGAGCACGGCAATGGAAAATGGGAAACCACCCTACTaGTCCCCTGTCATACATGTT +
Preference number: 2 (lower is better)
Translates to: AVTSGNRSLHSKSTAMENGKPPY*SPVIHV
Trigger: AACATGTATGACAGGGGACCAGTAGGGTGGTTTCCC...ATTTTCCATTGCCGTGCTCTTTGAATGCAGACTTCTATTTCCAGAAGTGACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR CCA 90 bp TTCTGGGTGCTGTGGAGTCCCTTGGCCAAACTTGAGTGCACTGGATTCGACATATTTAACACTTGGCCATaGAGGAATTTGGCAAGTTTT +
Preference number: 2 (lower is better)
Translates to: FWVLWSPLAKLECTGFDIFNTWP*RNLASF
Trigger: AAAACTTGCCAAATTCCTCCATGGCCAAGTGTTAAA...TATGTCGAATCCAGTGCACTCAAGTTTGGCCAAGGGACTCCACAGCACCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR CCA 90 bp TATACAGCCGTCTTTTTATTTTATCACAATAGGCAACAAGATGGGTCTGGTTTTTCTCCACAAGCACACTaGGGCTCTGGGCATTCCCAC +
Preference number: 2 (lower is better)
Translates to: YTAVFLFYHNRQQDGSGFSPQAH*GSGHSH
Trigger: GTGGGAATGCCCAGAGCCCCAGTGTGCTTGTGGAGA...AAAACCAGACCCATCTTGTTGCCTATTGTGATAAAATAAAAAGACGGCTGTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR CAA 90 bp AAGCCACTTTATTCCAGTCCCTTGAACATCACAGGCTGGTTTTATTaGGGACAGAACAGGTTTTATTTCCAAAGGTCCCTGAACACAGCA +
Preference number: 2 (lower is better)
Translates to: KPLYSSPLNITGWFY*GQNRFYFQRSLNTA
Trigger: TGCTGTGTTCAGGGACCTTTGGAAATAAAACCTGTTCTGTCCCAAATAAAACCAGCCTGTGATGTTCAAGGGACTGGAATAAAGTGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR CCA 90 bp AAATACAGACAGGGTCAGTGGCAGGCCAGGACAGGGACTATTTCTATACATTCTATAGAATCACAGGACTaGATGGGTTTCCCTTCTTTT +
Preference number: 2 (lower is better)
Translates to: KYRQGQWQARTGTISIHSIESQD*MGFPSF
Trigger: AAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTAT...AGAATGTATAGAAATAGTCCCTGTCCTGGCCTGCCACTGACCCTGTCTGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR CCA 90 bp GACAGGGACTATTTCTATACATTCTGGAAGTGTCGGCATTCATCAGCCTGCATGGACAACAGATTCAGGTaGGGAGTTTTGTCTTTCAAA +
Preference number: 2 (lower is better)
Translates to: DRDYFYTFWKCRHSSACMDNRFR*GVLSFK
Trigger: TTTGAAAGACAAAACTCCCCACCTGAATCTGTTGTC...CATGCAGGCTGATGAATGCCGACACTTCCAGAATGTATAGAAATAGTCCCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR CCA 90 bp AGGTTTCTCAAAACATTAACTGATTCCACCTACCAAAGGAGAATCAAAGGAAGGAGGGTAACTTGTTCTTaGGGAATCCAGCATCCGGTG +
Preference number: 2 (lower is better)
Translates to: RFLKTLTDSTYQRRIKGRRVTCS*GIQHPV
Trigger: CACCGGATGCTGGATTCCCCAAGAACAAGTTACCCT...CCTTCCTTTGATTCTCCTTTGGTAGGTGGAATCAGTTAATGTTTTGAGAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR CCA 90 bp TGTCGATTGGTACATTTGTGCAAAGACAGATATGACTTCCAAACAAGACAGACAAGGGTAACTTGTTCTTaGGGAATCCAGCATCCGGTG +
Preference number: 2 (lower is better)
Translates to: CRLVHLCKDRYDFQTRQTRVTCS*GIQHPV
Trigger: CACCGGATGCTGGATTCCCCAAGAACAAGTTACCCT...TGTCTGTCTTGTTTGGAAGTCATATCTGTCTTTGCACAAATGTACCAATCGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR-3UTR CCA 90 bp GGGCCTCCCTTTGCTAACTACTTGCAAGAGTATGACTCGCCTGTAACCAGCAAACATAGATTAAACCACTaGGAAGTTCCAAGAATGTAT +
Preference number: 2 (lower is better)
Translates to: GPPFANYLQEYDSPVTSKHRLNH*EVPRMY
Trigger: ATACATTCTTGGAACTTCCCAGTGGTTTAATCTATG...TTTGCTGGTTACAGGCGAGTCATACTCTTGCAAGTAGTTAGCAAAGGGAGGCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR GCA 90 bp TTTTATCACAATAGGCAACAAGATGGGTCTGGTTTTGGAATATGTTACCATTTGCACGAAGTCTGTCCATaGTCTCCACAAGCACACTGG +
Preference number: 2 (lower is better)
Translates to: FYHNRQQDGSGFGICYHLHEVCP*SPQAHW
Trigger: CCAGTGTGCTTGTGGAGAGCATGGACAGACTTCGTG...CAAATGGTAACATATTCCAAAACCAGACCCATCTTGTTGCCTATTGTGATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR-3UTR GCA 90 bp CAAGGCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTTTAGAAACTACAGCCTaGTGGGGAAGAGAGGGGAGT +
Preference number: 2 (lower is better)
Translates to: QGKTLNLVCITQYVIYSRLETTA*WGREGS
Trigger: ACTCCCCTCTCTTCCCCAGCAGGCTGTAGTTTCTAA...ACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
3UTR-3UTR GCA 90 bp GACAGGGACTATTTCTATACATTCTGGAAGTGTCGGCATTCATCAGCCTGCATGGATGAATTTGATGACTaGCCAACCTCTGATTCTTTA +
Preference number: 2 (lower is better)
Translates to: DRDYFYTFWKCRHSSACMDEFDD*PTSDSL
Trigger: TAAAGAATCAGAGGTTGGGCAGTCATCAAATTCATC...CATGCAGGCTGATGAATGCCGACACTTCCAGAATGTATAGAAATAGTCCCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR CCA 90 bp GGCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTCTTAGGGTAACTTGTTCTTaGGGAATCCAGCATCCGGTG +
Preference number: 2 (lower is better)
Translates to: GKTLNLVCITQYVIYSRLRVTCS*GIQHPV
Trigger: CACCGGATGCTGGATTCCCCAAGAACAAGTTACCCT...AAGACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
3UTR-3UTR GCA 90 bp TCTGCATTCAAAGAGCACGGCAATGGAAAATACTTTTGGATTCTCCATAGGGGGGATGAATTTGATGACTaGCCAACCTCTGATTCTTTA +
Preference number: 2 (lower is better)
Translates to: SAFKEHGNGKYFWILHRGDEFDD*PTSDSL
Trigger: TAAAGAATCAGAGGTTGGGCAGTCATCAAATTCATC...CCCCCTATGGAGAATCCAAAAGTATTTTCCATTGCCGTGCTCTTTGAATGCAGA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR CCA 90 bp AGGTTTCTCAAAACATTAACTGATTCCACCTACCAAAGGAGAATCAAAGGAAGGCTTTGGCAAGTGGCTTaGCAGCAAATATACCCACTA +
Preference number: 2 (lower is better)
Translates to: RFLKTLTDSTYQRRIKGRLWQVA*QQIYPL
Trigger: TAGTGGGTATATTTGCTGCCAAGCCACTTGCCAAAG...CCTTCCTTTGATTCTCCTTTGGTAGGTGGAATCAGTTAATGTTTTGAGAAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR CCA 90 bp AGGTTTCTCAAAACATTAACTGATTCCACCTACCAAAGGAGAATCAAAGGAAGGGACAACAGATTCAGGTaGGGAGTTTTGTCTTTCAAA +
Preference number: 2 (lower is better)
Translates to: RFLKTLTDSTYQRRIKGRDNRFR*GVLSFK
Trigger: TTTGAAAGACAAAACTCCCCACCTGAATCTGTTGTC...CCTTCCTTTGATTCTCCTTTGGTAGGTGGAATCAGTTAATGTTTTGAGAAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR CCA 90 bp AGGTTTCTCAAAACATTAACTGATTCCACCTACCAAAGGAGAATCAAAGGAAGGACAGATTTTAACACTTaGCCATGGAGGAATTTGGCA +
Preference number: 2 (lower is better)
Translates to: RFLKTLTDSTYQRRIKGRTDFNT*PWRNLA
Trigger: TGCCAAATTCCTCCATGGCCAAGTGTTAAAATCTGT...CCTTCCTTTGATTCTCCTTTGGTAGGTGGAATCAGTTAATGTTTTGAGAAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR CCA 90 bp CTGGAAATGCATTCAAAATTAAAGTTGGGCCCTAGTCAGGGTTACTTTGTATTTATAGAATCACAGGACTaGATGGGTTTCCCTTCTTTT +
Preference number: 2 (lower is better)
Translates to: LEMHSKLKLGPSQGYFVFIESQD*MGFPSF
Trigger: AAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTAT...AAATACAAAGTAACCCTGACTAGGGCCCAACTTTAATTTTGAATGCATTTCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR-3UTR CCA 90 bp CTGGAAATGCATTCAAAATTAAAGTTGGGCCCTAGTCAGGGTTACTTTGTATTTGCAACAAGATGGGTCTaGTTTTGGAATATGTTACCA +
Preference number: 2 (lower is better)
Translates to: LEMHSKLKLGPSQGYFVFATRWV*FWNMLP
Trigger: TGGTAACATATTCCAAAACCAGACCCATCTTGTTGC...AAATACAAAGTAACCCTGACTAGGGCCCAACTTTAATTTTGAATGCATTTCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR CAA 90 bp CACAATAGGCAACAAGATGGGTCTGGTTTTGGAATATGTTACCATTaGTGTTTAATTTCCAAAGACACGCATATTAGCTCAACTAGTGTA +
Preference number: 2 (lower is better)
Translates to: HNRQQDGSGFGICYH*CLISKDTHISSTSV
Trigger: TACACTAGTTGAGCTAATATGCGTGTCTTTGGAAATTAAACACAAATGGTAACATATTCCAAAACCAGACCCATCTTGTTGCCTATTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
3UTR-3UTR CAA 90 bp CATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGTGGGTTTCCCTTCTTTaGCCCCAACCCCCGAGTCTT +
Preference number: 3 (lower is better)
Translates to: HPVPSITPTARVTTDSGGWVSLL*PQPPSL
Trigger: AAGACTCGGGGGTTGGGGCAAAAGAAGGGAAACCCA...CCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
3UTR TCA 72 bp TGGGCATTCCCACGAAGCATCCACGACAAAAGAAGCTaGAGGCGTCACGGAGGAAGGCGCATCAGACCGCAC +
Preference number: 3 (lower is better)
Translates to: WAFPRSIHDKRS*RRHGGRRIRPH
Trigger: GTGCGGTCTGATGCGCCTTCCTCCGTGACGCCTTCAGCTTCTTTTGTCGTGGATGCTTCGTGGGAATGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR CCA 72 bp CACCACGAAGTCTGTCCATGCTCTCCACAAGCACACTaGGGCTCTGGGCATTCCCACGAAGCATCCACGACA +
Preference number: 3 (lower is better)
Translates to: HHEVCPCSPQAH*GSGHSHEASTT
Trigger: TGTCGTGGATGCTTCGTGGGAATGCCCAGAGCCCCAGTGTGCTTGTGGAGAGCATGGACAGACTTCGTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR-3UTR CAA 90 bp TCTAATGCTGTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTGGTCCTGGGTTTCCCTTCTTTaGCCCCAACCCCCGAGTCTT +
Preference number: 3 (lower is better)
Translates to: SNAVNGLLGLRGKPPYWSWVSLL*PQPPSL
Trigger: AAGACTCGGGGGTTGGGGCAAAAGAAGGGAAACCCA...GGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGACAGCATTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR-3UTR CAA 90 bp GTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTGGTCCCCTGTCATAGAGGGTAACTTGTTCTaGGGGAATCCAGCATCCGGT +
Preference number: 3 (lower is better)
Translates to: VNGLLGLRGKPPYWSPVIEGNLF*GNPASG
Trigger: ACCGGATGCTGGATTCCCCAAGAACAAGTTACCCTC...TATGACAGGGGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR CCA 72 bp GCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTaGGGAATCCAGCATCCGGTGCCATCCATCACCCCT +
Preference number: 3 (lower is better)
Translates to: AGIASPQRVTCS*GIQHPVPSITP
Trigger: AGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
3UTR TCA 72 bp TTCGATTCAGAGCAGGGAAAAGTGGGATGCAGCTCCTaGGCACTGCCAATAGGGCATGCTAGGTCTCCTCAC +
Preference number: 3 (lower is better)
Translates to: FDSEQGKVGCSS*ALPIGHARSPH
Trigger: GTGAGGAGACCTAGCATGCCCTATTGGCAGTGCTCAGGAGCTGCATCCCACTTTTCCCTGCTCTGAATCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR TCA 72 bp CAAGGAACAGAGTGGGTCTGGCTCAGCGAGATGTCATaGCTAAGGGCAGAGCCCAGGCAGGTTTCTCAAAAC +
Preference number: 3 (lower is better)
Translates to: QGTEWVWLSEMS*LRAEPRQVSQN
Trigger: GTTTTGAGAAACCTGCCTGGGCTCTGCCCTTAGTCATGACATCTCGCTGAGCCAGACCCACTCTGTTCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR CCA 72 bp AATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTaGTCCCCTGTCATACATGTTAACATTCCTGTGCTC +
Preference number: 3 (lower is better)
Translates to: NGLLGLRGKPPY*SPVIHVNIPVL
Trigger: GAGCACAGGAATGTTAACATGTATGACAGGGGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR-3UTR CAA 90 bp GAGGGAAACCACCCTACTGGTCCCCTGTCATACATGTTAACATTCCTGTGCTCCTGGGTTTCCCTTCTTTaGCCCCAACCCCCGAGTCTT +
Preference number: 3 (lower is better)
Translates to: EGNHPTGPLSYMLTFLCSWVSLL*PQPPSL
Trigger: AAGACTCGGGGGTTGGGGCAAAAGAAGGGAAACCCA...GGAGCACAGGAATGTTAACATGTATGACAGGGGACCAGTAGGGTGGTTTCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR-3UTR CAA 90 bp GTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTGGTCCCCTGTCATATTCAGGTGGGGAGTTTaGTCTTTCAAACAAAAGCCC +
Preference number: 3 (lower is better)
Translates to: VNGLLGLRGKPPYWSPVIFRWGV*SFKQKP
Trigger: GGGCTTTTGTTTGAAAGACAAAACTCCCCACCTGAA...TATGACAGGGGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR GCA 72 bp AGTCTGCAGAGTATTGATCTGCTCAGAAAAGCACCATaGCGCCAGTCTAATGCTGTCAATGGGCTGCTGGGC +
Preference number: 3 (lower is better)
Translates to: SLQSIDLLRKAP*RQSNAVNGLLG
Trigger: GCCCAGCAGCCCATTGACAGCATTAGACTGGCGGCATGGTGCTTTTCTGAGCAGATCAATACTCTGCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR CCA 72 bp GTGGCAGGCCAGGACAGGGACTATTTCTATACATTCTaGAAGTGTCGGCATTCATCAGCCTGCATGTGGCTC +
Preference number: 3 (lower is better)
Translates to: VAGQDRDYFYTF*KCRHSSACMWL
Trigger: GAGCCACATGCAGGCTGATGAATGCCGACACTTCCAGAATGTATAGAAATAGTCCCTGTCCTGGCCTGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR CAA 90 bp GTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTGGTCCCCTGTCATACATTCAAAATTAAAGTaGGGCCCTAGTCAGGGTTAC +
Preference number: 3 (lower is better)
Translates to: VNGLLGLRGKPPYWSPVIHSKLK*GPSQGY
Trigger: GTAACCCTGACTAGGGCCCAACTTTAATTTTGAATG...TATGACAGGGGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR-3UTR CAA 90 bp GGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATCAAACAAAAGCCCCTaGAAGCTTGCAATAGAATCA +
Preference number: 3 (lower is better)
Translates to: GNPASGAIHHPYGTCDNRSNKSP*KLAIES
Trigger: TGATTCTATTGCAAGCTTCAAGGGGCTTTTGTTTGA...TCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
3UTR TCA 72 bp AGTCTTCTGGGTGCTGTGGAGTCCCTTGGCCAAACTTaGGTGCACTGGATTCGACATACAAAGACCTTCCTG +
Preference number: 3 (lower is better)
Translates to: SLLGAVESLGQT*VHWIRHTKTFL
Trigger: CAGGAAGGTCTTTGTATGTCGAATCCAGTGCACTCAAGTTTGGCCAAGGGACTCCACAGCACCCAGAAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR GCA 72 bp CCTACTGGTCCCCTGTCATACATGTTAACATTCCTGTaGTCCAATTGTCCTGTCCCACTACCACCTGCTCTG +
Preference number: 3 (lower is better)
Translates to: PTGPLSYMLTFL*SNCPVPLPPAL
Trigger: CAGAGCAGGTGGTAGTGGGACAGGACAATTGGAGCACAGGAATGTTAACATGTATGACAGGGGACCAGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR-3UTR CAA 90 bp TCTAATGCTGTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTGGTCCTGTCGATTGGTACATTaGTGCAAAGACAGATATGAC +
Preference number: 3 (lower is better)
Translates to: SNAVNGLLGLRGKPPYWSCRLVH*CKDRYD
Trigger: GTCATATCTGTCTTTGCACAAATGTACCAATCGACA...GGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGACAGCATTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
3UTR CCA 72 bp TCTCTTTCTGTGGTTCCTCTTCTTTGGCAAGTGGCTTaGCAGCAAATATACCCACTAGGGACCTCTCTGCCT +
Preference number: 3 (lower is better)
Translates to: SLSVVPLLWQVA*QQIYPLGTSLP
Trigger: AGGCAGAGAGGTCCCTAGTGGGTATATTTGCTGCCAAGCCACTTGCCAAAGAAGAGGAACCACAGAAAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR GCA 72 bp CTGCCAATAGGGCATGCTAGGTCTCCTCACCCAGTCTaGCTTCTGTGTCTTAGGTTAATTCGCTATTTTCCA +
Preference number: 3 (lower is better)
Translates to: LPIGHARSPHPV*LLCLRLIRYFP
Trigger: TGGAAAATAGCGAATTAACCTAAGACACAGAAGGCAGACTGGGTGAGGAGACCTAGCATGCCCTATTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR CAA 90 bp AGTGACATAAACCTTGAGGCATGCAGTCTTCTGGGTGCTGTGGAGTCCCTTGGCTGTCGATTGGTACATTaGTGCAAAGACAGATATGAC +
Preference number: 3 (lower is better)
Translates to: SDINLEACSLLGAVESLGCRLVH*CKDRYD
Trigger: GTCATATCTGTCTTTGCACAAATGTACCAATCGACA...GCCAAGGGACTCCACAGCACCCAGAAGACTGCATGCCTCAAGGTTTATGTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR CAA 90 bp GGGTCAGTGGCAGGCCAGGACAGGGACTATTTCTATACATTCTGGAAGTGTCGGTTTCACCCTATGGATTaGGTTCTTTTTGGTCTACCA +
Preference number: 3 (lower is better)
Translates to: GSVAGQDRDYFYTFWKCRFHPMD*VLFGLP
Trigger: TGGTAGACCAAAAAGAACCAAATCCATAGGGTGAAA...CCGACACTTCCAGAATGTATAGAAATAGTCCCTGTCCTGGCCTGCCACTGACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR GCA 72 bp TTCTATACATTCTGGAAGTGTCGGCATTCATCAGCCTaGATGTGGCTCACTTTTCTTTCTGGAATAGCCGGA +
Preference number: 3 (lower is better)
Translates to: FYTFWKCRHSSA*MWLTFLSGIAG
Trigger: TCCGGCTATTCCAGAAAGAAAAGTGAGCCACATGCAGGCTGATGAATGCCGACACTTCCAGAATGTATAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR CAA 90 bp AACTACTTGCAAGAGTATGACTCGCCTGTAACCAGCAAATTTTTACTCTTAGCTACCCCAGAGGGTAACTaGTTCTTGGGGAATCCAGCA +
Preference number: 3 (lower is better)
Translates to: NYLQEYDSPVTSKFLLLATPEGN*FLGNPA
Trigger: TGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGT...AGCTAAGAGTAAAAATTTGCTGGTTACAGGCGAGTCATACTCTTGCAAGTAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR TCA 72 bp ATCCTTCAGGTCGTAAGCCACTTTATTCCAGTCCCTTaGACATCACAGGCTGGTTTTATTTGGGACAGAACA +
Preference number: 3 (lower is better)
Translates to: ILQVVSHFIPVP*TSQAGFIWDRT
Trigger: TGTTCTGTCCCAAATAAAACCAGCCTGTGATGTTCAAGGGACTGGAATAAAGTGGCTTACGACCTGAAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR CAA 90 bp GACAGGGACTATTTCTATACATTCTGGAAGTGTCGGCATTCATCAGCCTGCATGTCAAACAAAAGCCCCTaGAAGCTTGCAATAGAATCA +
Preference number: 3 (lower is better)
Translates to: DRDYFYTFWKCRHSSACMSNKSP*KLAIES
Trigger: TGATTCTATTGCAAGCTTCAAGGGGCTTTTGTTTGA...CATGCAGGCTGATGAATGCCGACACTTCCAGAATGTATAGAAATAGTCCCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR CAA 90 bp GGCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTCTTGAGGGTAACTTGTTCTaGGGGAATCCAGCATCCGGT +
Preference number: 3 (lower is better)
Translates to: GKTLNLVCITQYVIYSRLEGNLF*GNPASG
Trigger: ACCGGATGCTGGATTCCCCAAGAACAAGTTACCCTC...AAGACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
3UTR-3UTR CAA 90 bp CAAGGCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTACCCCAGAGGGTAACTaGTTCTTGGGGAATCCAGCA +
Preference number: 3 (lower is better)
Translates to: QGKTLNLVCITQYVIYSRTPEGN*FLGNPA
Trigger: TGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGT...ACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
3UTR-3UTR CAA 90 bp GCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTCTTTGAGGGTAACTTGTTCTaGGGGAATCCAGCATCCGGT +
Preference number: 3 (lower is better)
Translates to: AKHLIWSALPNMLYTAVFEGNLF*GNPASG
Trigger: ACCGGATGCTGGATTCCCCAAGAACAAGTTACCCTC...AAAGACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
3UTR-3UTR CAA 90 bp AGGTTTCTCAAAACATTAACTGATTCCACCTACCAAAGGAGAATCAAAGGAAGGCCCTTTGCTAACTACTaGCAAGAGTATGACTCGCCT +
Preference number: 3 (lower is better)
Translates to: RFLKTLTDSTYQRRIKGRPFANY*QEYDSP
Trigger: AGGCGAGTCATACTCTTGCAAGTAGTTAGCAAAGGG...CCTTCCTTTGATTCTCCTTTGGTAGGTGGAATCAGTTAATGTTTTGAGAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR GCA 72 bp CTCAGACTTGTGCTGTCACTTCTGGAAATAGAAGTCTaGATTCAAAGAGCACGGCAATGGAAAATACTTTTG +
Preference number: 3 (lower is better)
Translates to: LRLVLSLLEIEV*IQRARQWKILL
Trigger: CAAAAGTATTTTCCATTGCCGTGCTCTTTGAATGCAGACTTCTATTTCCAGAAGTGACAGCACAAGTCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR CAA 90 bp GGCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTCTTTTCAGGTGGGGAGTTTaGTCTTTCAAACAAAAGCCC +
Preference number: 3 (lower is better)
Translates to: GKTLNLVCITQYVIYSRLFRWGV*SFKQKP
Trigger: GGGCTTTTGTTTGAAAGACAAAACTCCCCACCTGAA...AAGACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
3UTR CCA 72 bp AAGCCACTTTATTCCAGTCCCTTGAACATCACAGGCTaGTTTTATTTGGGACAGAACAGGTTTTATTTCCAA +
Preference number: 3 (lower is better)
Translates to: KPLYSSPLNITG*FYLGQNRFYFQ
Trigger: TTGGAAATAAAACCTGTTCTGTCCCAAATAAAACCAGCCTGTGATGTTCAAGGGACTGGAATAAAGTGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR CAA 90 bp GCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTCTTTTTCAGGTGGGGAGTTTaGTCTTTCAAACAAAAGCCC +
Preference number: 3 (lower is better)
Translates to: AKHLIWSALPNMLYTAVFFRWGV*SFKQKP
Trigger: GGGCTTTTGTTTGAAAGACAAAACTCCCCACCTGAA...AAAGACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
3UTR-3UTR CAA 90 bp AACTACTTGCAAGAGTATGACTCGCCTGTAACCAGCAAATTTTTACTCTTAGCTGGCAAAACACTTAATTaGGTCTGCATTACCCAATAT +
Preference number: 3 (lower is better)
Translates to: NYLQEYDSPVTSKFLLLAGKTLN*VCITQY
Trigger: ATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCC...AGCTAAGAGTAAAAATTTGCTGGTTACAGGCGAGTCATACTCTTGCAAGTAGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR-3UTR CAA 90 bp CAAGGCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTAAGATGGGTCTGGTTTaGGAATATGTTACCATTTGT +
Preference number: 3 (lower is better)
Translates to: QGKTLNLVCITQYVIYSRKMGLV*EYVTIC
Trigger: ACAAATGGTAACATATTCCAAAACCAGACCCATCTT...ACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
3UTR-3UTR CAA 90 bp CTGGAAATGCATTCAAAATTAAAGTTGGGCCCTAGTCAGGGTTACTTTGTATTTAAGATGGGTCTGGTTTaGGAATATGTTACCATTTGT +
Preference number: 3 (lower is better)
Translates to: LEMHSKLKLGPSQGYFVFKMGLV*EYVTIC
Trigger: ACAAATGGTAACATATTCCAAAACCAGACCCATCTT...AAATACAAAGTAACCCTGACTAGGGCCCAACTTTAATTTTGAATGCATTTCCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp CCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGCGCAGGGCTCAGAACTaGCCGGCACTGCTCGGGTCG +
Preference number: 4 (lower is better)
Translates to: PVPSITPTARVTTDSGGERRAQN*PALLGS
Trigger: CGACCCGAGCAGTGCCGGCCAGTTCTGAGCCCTGCG...CTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp CATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGCGCAGGGCTCAGAACTaGCCGGCACTGCTCGGGTCG +
Preference number: 4 (lower is better)
Translates to: HPVPSITPTARVTTDSGGRRAQN*PALLGS
Trigger: CGACCCGAGCAGTGCCGGCCAGTTCTGAGCCCTGCG...CCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp CCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGGGGAGTGGGCCCCCATaGGGAAATGTCCCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: PVPSITPTARVTTDSGGEGSGPP*GNVPAR
Trigger: GCGAGCTGGGACATTTCCCCATGGGGGCCCACTCCC...CTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR TCA 90 bp GGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGACCAGCAAGTCCTGCATaGCCTCCGGGCGCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: GNPASGAIHHPYGTCDNRPASPA*PPGAAC
Trigger: GCAAGCTGCGCCCGGAGGTCATGCAGGACTTGCTGG...TCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR TCA 90 bp GGTAACTTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCCCAGCAAGTCCTGCATaGCCTCCGGGCGCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: GNLFLGNPASGAIHHPYGPASPA*PPGAAC
Trigger: GCAAGCTGCGCCCGGAGGTCATGCAGGACTTGCTGG...GCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAGTTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR TCA 90 bp TGCCGCCAGTCTAATGCTGTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCATGGGCTGCTGGGCCTaGGAGGGAAACCACCCTACT +
Preference number: 4 (lower is better)
Translates to: CRQSNAVNGLLGLRGKPPMGCWA*EGNHPT
Trigger: AGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCAT...GGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGACAGCATTAGACTGGCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR GCA 90 bp TCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACACTGCTCGGGTCGCACTaGAGGAGGCGCACAATGGAC +
Preference number: 4 (lower is better)
Translates to: SWGIQHPVPSITPTARVTLLGSH*RRRTMD
Trigger: GTCCATTGTGCGCCTCCTGCAGTGCGACCCGAGCAG...TGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp ATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGACGCAGGGCTCAGAACTaGCCGGCACTGCTCGGGTCG +
Preference number: 4 (lower is better)
Translates to: MSQLAGIASPQRVTCSWGRRAQN*PALLGS
Trigger: CGACCCGAGCAGTGCCGGCCAGTTCTGAGCCCTGCG...TCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR TCA 90 bp CCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGGGTACAGAACCACTGTaGGGAACTGACCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PVPSITPTARVTTDSGGEGTEPL*GTDPWR
Trigger: CCTCCAGGGGTCAGTTCCTCACAGTGGTTCTGTACC...CTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp CTTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGGGGGTCTGGGGTCCCTaGTCTACCGCAGTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: LVLGESSIRCHPSPLRHVGVWGP*STAVKF
Trigger: GAACTTCACTGCGGTAGAGCAGGGACCCCAGACCCC...CACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000395923.5
CDS-3UTR GCA 90 bp GCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGAATCCAGCATCCGGGGGTGCCATCTGCTTaGCTCCTCGGGTCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: AGIASPQRVTCSWGIQHPGVPSA*LLGSWE
Trigger: CTCCCAGGACCCGAGGAGGCAAGCAGATGGCACCCC...CGGATGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395923.5
CDS-3UTR CCA 90 bp TGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGAATCCAGCATCCGGTCGCAGGGCTCAGAACTaGCCGGCACTGCTCGGGTCG +
Preference number: 4 (lower is better)
Translates to: WNSLTPEGNLFLGNPASGRRAQN*PALLGS
Trigger: CGACCCGAGCAGTGCCGGCCAGTTCTGAGCCCTGCG...ACCGGATGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp TGCCGCCAGTCTAATGCTGTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTCTCCACAAGCACACTaGGGCTCTGGGCATTCCCAC +
Preference number: 4 (lower is better)
Translates to: CRQSNAVNGLLGLRGKPPSPQAH*GSGHSH
Trigger: GTGGGAATGCCCAGAGCCCCAGTGTGCTTGTGGAGA...GGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGACAGCATTAGACTGGCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp GCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGAATCCAGCATCCGGGGAGTGGGCCCCCATaGGGAAATGTCCCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: AGIASPQRVTCSWGIQHPGSGPP*GNVPAR
Trigger: GCGAGCTGGGACATTTCCCCATGGGGGCCCACTCCC...CGGATGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp GTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGTTTGGGAGTGGGCCCCCATaGGGAAATGTCCCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: VPSITPTARVTTDSGGEFGSGPP*GNVPAR
Trigger: GCGAGCTGGGACATTTCCCCATGGGGGCCCACTCCC...AAACTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR TCA 90 bp CCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGCACGACAAAAGAAGCTaGAGGCGTCACGGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PVPSITPTARVTTDSGGEHDKRS*RRHGGR
Trigger: CCTTCCTCCGTGACGCCTTCAGCTTCTTTTGTCGTG...CTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR TCA 90 bp GGTAACTTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCCCCCTACGGCACGTGTaGCAACAGATTCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GNLFLGNPASGAIHHPYGPLRHV*QQIQVG
Trigger: CCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGG...GCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAGTTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR TCA 90 bp GCTCTGGGCATTCCCACGAAGCATCCACGACAAAAGAAGCTGAAGGCGTCACGGATGGGCTGCTGGGCCTaGGAGGGAAACCACCCTACT +
Preference number: 4 (lower is better)
Translates to: ALGIPTKHPRQKKLKASRMGCWA*EGNHPT
Trigger: AGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCAT...CCGTGACGCCTTCAGCTTCTTTTGTCGTGGATGCTTCGTGGGAATGCCCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR GCA 90 bp GGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGAGAATCCAGCATCCGGTaGCATCCATCACCCCTACGG +
Preference number: 4 (lower is better)
Translates to: GNPASGAIHHPYGTCDNRESSIR*HPSPLR
Trigger: CCGTAGGGGTGATGGATGGCACCGGATGCTGGATTC...TCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR GCA 90 bp CATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGCACCTGCTCTGCATCTaGCCTCTAGGCATGGCCACT +
Preference number: 4 (lower is better)
Translates to: HPVPSITPTARVTTDSGGHLLCI*PLGMAT
Trigger: AGTGGCCATGCCTAGAGGGCAGATGCAGAGCAGGTG...CCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp GAGGGAAACCACCCTACTGGTCCCCTGTCATACATGTTAACATTCCTGTGCTCCCGCAGGGCTCAGAACTaGCCGGCACTGCTCGGGTCG +
Preference number: 4 (lower is better)
Translates to: EGNHPTGPLSYMLTFLCSRRAQN*PALLGS
Trigger: CGACCCGAGCAGTGCCGGCCAGTTCTGAGCCCTGCG...GGAGCACAGGAATGTTAACATGTATGACAGGGGACCAGTAGGGTGGTTTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp TCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAAGCACACTGGGGCTCTaGGCATTCCCACGAAGCATC +
Preference number: 4 (lower is better)
Translates to: SWGIQHPVPSITPTARVTSTLGL*AFPRSI
Trigger: GATGCTTCGTGGGAATGCCCAGAGCCCCAGTGTGCT...TGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp GTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTGGTCCCCTGTCATAGAAACTACAGCCTGCTaGGGAAGAGAGGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: VNGLLGLRGKPPYWSPVIETTAC*GREGSG
Trigger: CCCACTCCCCTCTCTTCCCCAGCAGGCTGTAGTTTC...TATGACAGGGGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp CTTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGGAAACTACAGCCTGCTaGGGAAGAGAGGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: LVLGESSIRCHPSPLRHVETTAC*GREGSG
Trigger: CCCACTCCCCTCTCTTCCCCAGCAGGCTGTAGTTTC...CACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp TGCCGCCAGTCTAATGCTGTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCAGGCATGCAGTCTTCTaGGTGCTGTGGAGTCCCTTG +
Preference number: 4 (lower is better)
Translates to: CRQSNAVNGLLGLRGKPPRHAVF*VLWSPL
Trigger: CAAGGGACTCCACAGCACCCAGAAGACTGCATGCCT...GGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGACAGCATTAGACTGGCGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR TCA 90 bp GTCACGGAGGAAGGCGCATCAGACCGCACAGGGGACGGCATCACCATTGATATTGGTACAGAACCACTGTaGGGAACTGACCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: VTEEGASDRTGDGITIDIGTEPL*GTDPWR
Trigger: CCTCCAGGGGTCAGTTCCTCACAGTGGTTCTGTACC...AATATCAATGGTGATGCCGTCCCCTGTGCGGTCTGATGCGCCTTCCTCCGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp GGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGAGCCCATTTCAGCTTCTaGTCCAGCTTCCCCCTCGAA +
Preference number: 4 (lower is better)
Translates to: GNPASGAIHHPYGTCDNRAHFSF*SSFPLE
Trigger: TTCGAGGGGGAAGCTGGAGCAGAAGCTGAAATGGGC...TCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR GCA 90 bp GGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATATGCAGTCACTCAGTaGCTGGGATCTCGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: GNPASGAIHHPYGTCDNRYAVTQ*LGSRGL
Trigger: AAGGCCCCGAGATCCCAGGCACTGAGTGACTGCATA...TCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311028.4
CDS-3UTR GCA 90 bp TGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGAATCCAGCATCCGGTCCAAGGGGTGCCATCTaGTTGCCTCCTCGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: WNSLTPEGNLFLGNPASGPRGAI*LPPRVL
Trigger: CAGGACCCGAGGAGGCAAGCAGATGGCACCCCTTGG...ACCGGATGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395923.5
CDS-3UTR CCA 90 bp GGTAACTTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCAGCACACTGGGGCTCTaGGCATTCCCACGAAGCATC +
Preference number: 4 (lower is better)
Translates to: GNLFLGNPASGAIHHPYGSTLGL*AFPRSI
Trigger: GATGCTTCGTGGGAATGCCCAGAGCCCCAGTGTGCT...GCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAGTTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp TCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAAATGTCCCAGCTCGCTaGAATAGCCTCACCCCAGAG +
Preference number: 4 (lower is better)
Translates to: SWGIQHPVPSITPTARVTNVPAR*NSLTPE
Trigger: CTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACATT...TGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp GGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGAAATGTCCCAGCTCGCTaGAATAGCCTCACCCCAGAG +
Preference number: 4 (lower is better)
Translates to: GNPASGAIHHPYGTCDNRNVPAR*NSLTPE
Trigger: CTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACATT...TCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp GTCACGGAGGAAGGCGCATCAGACCGCACAGGGGACGGCATCACCATTGATATTTACAGACAGGGTCAGTaGCAGGCCAGGACAGGGACT +
Preference number: 4 (lower is better)
Translates to: VTEEGASDRTGDGITIDIYRQGQ*QARTGT
Trigger: AGTCCCTGTCCTGGCCTGCCACTGACCCTGTCTGTA...AATATCAATGGTGATGCCGTCCCCTGTGCGGTCTGATGCGCCTTCCTCCGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR CAA 72 bp CGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTaGGGGAATCCAGCATCCGGTGCCATCCATCACCCC +
Preference number: 4 (lower is better)
Translates to: RWNSLTPEGNLF*GNPASGAIHHP
Trigger: GGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR TCA 90 bp AGTGACATAAACCTTGAGGCATGCAGTCTTCTGGGTGCTGTGGAGTCCCTTGGCATGGGCTGCTGGGCCTaGGAGGGAAACCACCCTACT +
Preference number: 4 (lower is better)
Translates to: SDINLEACSLLGAVESLGMGCWA*EGNHPT
Trigger: AGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCAT...GCCAAGGGACTCCACAGCACCCAGAAGACTGCATGCCTCAAGGTTTATGTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR TCA 90 bp GTCACGGAGGAAGGCGCATCAGACCGCACAGGGGACGGCATCACCATTGATATTCAGGGGCAGGGAAACTaGATATTCCAGACCTGGCTC +
Preference number: 4 (lower is better)
Translates to: VTEEGASDRTGDGITIDIQGQGN*IFQTWL
Trigger: GAGCCAGGTCTGGAATATTCAGTTTCCCTGCCCCTG...AATATCAATGGTGATGCCGTCCCCTGTGCGGTCTGATGCGCCTTCCTCCGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000521599.5
CDS-3UTR TCA 90 bp GGTAACTTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCCAGGGGCAGGGAAACTaGATATTCCAGACCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GNLFLGNPASGAIHHPYGQGQGN*IFQTWL
Trigger: GAGCCAGGTCTGGAATATTCAGTTTCCCTGCCCCTG...GCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAGTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000521599.5
CDS-3UTR TCA 90 bp ATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGAGGTACAGAACCACTGTaGGGAACTGACCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: MSQLAGIASPQRVTCSWGGTEPL*GTDPWR
Trigger: CCTCCAGGGGTCAGTTCCTCACAGTGGTTCTGTACC...TCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp GGAAATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGCTTTCCAGCAAGTCCTaGATGACCTCCGGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: GNVPARWNSLTPEGNLFLLSSKS*MTSGRS
Trigger: GCTGCGCCCGGAGGTCATGCAGGACTTGCTGGAAAG...CAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACATTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR GCA 90 bp TGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGAATCCAGCATCCGGTCTTTCCAGCAAGTCCTaGATGACCTCCGGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: WNSLTPEGNLFLGNPASGLSSKS*MTSGRS
Trigger: GCTGCGCCCGGAGGTCATGCAGGACTTGCTGGAAAG...ACCGGATGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR GCA 90 bp TGCCGCCAGTCTAATGCTGTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTGTCCCATCTCCATTTaGATCGAAGGTGCGGAAGAC +
Preference number: 4 (lower is better)
Translates to: CRQSNAVNGLLGLRGKPPCPISI*IEGAED
Trigger: GTCTTCCGCACCTTCGATGCAAATGGAGATGGGACA...GGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGACAGCATTAGACTGGCGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR GCA 90 bp GGTAACTTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCGCCCATTTCAGCTTCTaGTCCAGCTTCCCCCTCGAA +
Preference number: 4 (lower is better)
Translates to: GNLFLGNPASGAIHHPYGAHFSF*SSFPLE
Trigger: TTCGAGGGGGAAGCTGGAGCAGAAGCTGAAATGGGC...GCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAGTTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR GCA 90 bp GTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGTTTGAATCCAGCATCCGGTaGCATCCATCACCCCTACGG +
Preference number: 4 (lower is better)
Translates to: VPSITPTARVTTDSGGEFESSIR*HPSPLR
Trigger: CCGTAGGGGTGATGGATGGCACCGGATGCTGGATTC...AAACTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR GCA 90 bp GCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGAATCCAGCATCCGGAATCCAGCATCCGGTaGCATCCATCACCCCTACGG +
Preference number: 4 (lower is better)
Translates to: AGIASPQRVTCSWGIQHPESSIR*HPSPLR
Trigger: CCGTAGGGGTGATGGATGGCACCGGATGCTGGATTC...CGGATGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR GCA 90 bp CCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGTTAGAAACTACAGCCTaGTGGGGAAGAGAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: PVPSITPTARVTTDSGGELETTA*WGREGS
Trigger: ACTCCCCTCTCTTCCCCAGCAGGCTGTAGTTTCTAA...CTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR GCA 90 bp TCTAATGCTGTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTGGTCCCACTACCACCTGCTCTaGATCTGCCCTCTAGGCATG +
Preference number: 4 (lower is better)
Translates to: SNAVNGLLGLRGKPPYWSHYHLL*ICPLGM
Trigger: CATGCCTAGAGGGCAGATGCAGAGCAGGTGGTAGTG...GGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGACAGCATTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR GCA 90 bp AGTGACATAAACCTTGAGGCATGCAGTCTTCTGGGTGCTGTGGAGTCCCTTGGCCCTCTGGACTCTTCATaGCCACAAGGTGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: SDINLEACSLLGAVESLGPLDSS*PQGGRG
Trigger: CCCCCTCCCACCTTGTGGGCATGAAGAGTCCAGAGG...GCCAAGGGACTCCACAGCACCCAGAAGACTGCATGCCTCAAGGTTTATGTCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395923.5
CDS-3UTR CCA 90 bp GTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTGGTCCCCTGTCATAGCTCTACAATTCGATTaGTGGGCGCAGGGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: VNGLLGLRGKPPYWSPVIALQFD*WAQGSE
Trigger: TTCTGAGCCCTGCGCCCACCAATCGAATTGTAGAGC...TATGACAGGGGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp CATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGGCTCTACAATTCGATTaGTGGGCGCAGGGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: HPVPSITPTARVTTDSGGALQFD*WAQGSE
Trigger: TTCTGAGCCCTGCGCCCACCAATCGAATTGTAGAGC...CCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp GGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGAGCTCTACAATTCGATTaGTGGGCGCAGGGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: GNPASGAIHHPYGTCDNRALQFD*WAQGSE
Trigger: TTCTGAGCCCTGCGCCCACCAATCGAATTGTAGAGC...TCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp GTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGTTTGAAACTACAGCCTGCTaGGGAAGAGAGGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: VPSITPTARVTTDSGGEFETTAC*GREGSG
Trigger: CCCACTCCCCTCTCTTCCCCAGCAGGCTGTAGTTTC...AAACTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp AGGGTAACTTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGAAACTACAGCCTGCTaGGGAAGAGAGGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: RVTCSWGIQHPVPSITPTETTAC*GREGSG
Trigger: CCCACTCCCCTCTCTTCCCCAGCAGGCTGTAGTTTC...CGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAGTTACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp GTCACGGAGGAAGGCGCATCAGACCGCACAGGGGACGGCATCACCATTGATATTCAGAGCAGGGAAAAGTaGGATGCAGCTCCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: VTEEGASDRTGDGITIDIQSREK*DAAPEH
Trigger: GTGCTCAGGAGCTGCATCCCACTTTTCCCTGCTCTG...AATATCAATGGTGATGCCGTCCCCTGTGCGGTCTGATGCGCCTTCCTCCGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp TCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACATGCTGTGGAGTCCCTTaGCCAAACTTGAGTGCACTG +
Preference number: 4 (lower is better)
Translates to: SWGIQHPVPSITPTARVTCCGVP*PNLSAL
Trigger: CAGTGCACTCAAGTTTGGCCAAGGGACTCCACAGCA...TGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp GTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTGGTCCCCTGTCATAGTCTTCTGGGTGCTGTaGAGTCCCTTGGCCAAACTT +
Preference number: 4 (lower is better)
Translates to: VNGLLGLRGKPPYWSPVIVFWVL*SPLAKL
Trigger: AAGTTTGGCCAAGGGACTCCACAGCACCCAGAAGAC...TATGACAGGGGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp GTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTGGTCCCCTGTCATATCAGGTGGTGTCCTCTaGACTCTTCATGCCCACAAG +
Preference number: 4 (lower is better)
Translates to: VNGLLGLRGKPPYWSPVISGGVL*TLHAHK
Trigger: CTTGTGGGCATGAAGAGTCCAGAGGACACCACCTGA...TATGACAGGGGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395923.5
3UTR CAA 72 bp CCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTaGTTCTTGGGGAATCCAGCATCCGGTGCCATCCAT +
Preference number: 4 (lower is better)
Translates to: PARWNSLTPEGN*FLGNPASGAIH
Trigger: ATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR TCA 90 bp TCATCAAACAATGAACACCACGAAGTCTGTCCATGCTCTCCACAAGCACACTGGCCAGCAAGTCCTGCATaGCCTCCGGGCGCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: SSNNEHHEVCPCSPQAHWPASPA*PPGAAC
Trigger: GCAAGCTGCGCCCGGAGGTCATGCAGGACTTGCTGG...CCAGTGTGCTTGTGGAGAGCATGGACAGACTTCGTGGTGTTCATTGTTTGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR TCA 90 bp GAAGCTTGCAATAGAATCACAGGACTGGATGGGTTTCCCTTCTTTTGCCCCAACCCAGCAAGTCCTGCATaGCCTCCGGGCGCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: EACNRITGLDGFPFFCPNPASPA*PPGAAC
Trigger: GCAAGCTGCGCCCGGAGGTCATGCAGGACTTGCTGG...GTTGGGGCAAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTATTGCAAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR TCA 90 bp GTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTGGTCCCCTGTCATAGCATCTCTGCCTTGCTaGTATAGCCATTTCCGTCCA +
Preference number: 4 (lower is better)
Translates to: VNGLLGLRGKPPYWSPVIASLPC*YSHFRP
Trigger: TGGACGGAAATGGCTATATCAGCAAGGCAGAGATGC...TATGACAGGGGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR TCA 90 bp ATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGACAGGGGCAGGGAAACTaGATATTCCAGACCTGGCTC +
Preference number: 4 (lower is better)
Translates to: MSQLAGIASPQRVTCSWGQGQGN*IFQTWL
Trigger: GAGCCAGGTCTGGAATATTCAGTTTCCCTGCCCCTG...TCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000521599.5
CDS-3UTR TCA 90 bp AGTGACATAAACCTTGAGGCATGCAGTCTTCTGGGTGCTGTGGAGTCCCTTGGCCTCAGCGAGATGTCATaGCTAAGGGCAGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SDINLEACSLLGAVESLGLSEMS*LRAEPR
Trigger: CCTGGGCTCTGCCCTTAGTCATGACATCTCGCTGAG...GCCAAGGGACTCCACAGCACCCAGAAGACTGCATGCCTCAAGGTTTATGTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp CTTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGGCGGAAGACATGCTCTaGAAATTTGGAAGCATCCCC +
Preference number: 4 (lower is better)
Translates to: LVLGESSIRCHPSPLRHVAEDML*KFGSIP
Trigger: GGGGATGCTTCCAAATTTGCAGAGCATGTCTTCCGC...CACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR GCA 90 bp GTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTGGTCCCCTGTCATAGCGGAAGACATGCTCTaGAAATTTGGAAGCATCCCC +
Preference number: 4 (lower is better)
Translates to: VNGLLGLRGKPPYWSPVIAEDML*KFGSIP
Trigger: GGGGATGCTTCCAAATTTGCAGAGCATGTCTTCCGC...TATGACAGGGGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR GCA 90 bp GTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGTTTGCCCATTTCAGCTTCTaGTCCAGCTTCCCCCTCGAA +
Preference number: 4 (lower is better)
Translates to: VPSITPTARVTTDSGGEFAHFSF*SSFPLE
Trigger: TTCGAGGGGGAAGCTGGAGCAGAAGCTGAAATGGGC...AAACTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR GCA 90 bp ATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGAGCCCATTTCAGCTTCTaGTCCAGCTTCCCCCTCGAA +
Preference number: 4 (lower is better)
Translates to: MSQLAGIASPQRVTCSWGAHFSF*SSFPLE
Trigger: TTCGAGGGGGAAGCTGGAGCAGAAGCTGAAATGGGC...TCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR GCA 90 bp GGGTCAGTGGCAGGCCAGGACAGGGACTATTTCTATACATTCTGGAAGTGTCGGGAATCCAGCATCCGGTaGCATCCATCACCCCTACGG +
Preference number: 4 (lower is better)
Translates to: GSVAGQDRDYFYTFWKCRESSIR*HPSPLR
Trigger: CCGTAGGGGTGATGGATGGCACCGGATGCTGGATTC...CCGACACTTCCAGAATGTATAGAAATAGTCCCTGTCCTGGCCTGCCACTGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp TGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGAATCCAGCATCCGGTGAATCCAGCATCCGGTaGCATCCATCACCCCTACGG +
Preference number: 4 (lower is better)
Translates to: WNSLTPEGNLFLGNPASGESSIR*HPSPLR
Trigger: CCGTAGGGGTGATGGATGGCACCGGATGCTGGATTC...ACCGGATGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR GCA 90 bp TCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACACTCAGAAAAGCACCATaGCGCCAGTCTAATGCTGTC +
Preference number: 4 (lower is better)
Translates to: SWGIQHPVPSITPTARVTLRKAP*RQSNAV
Trigger: GACAGCATTAGACTGGCGGCATGGTGCTTTTCTGAG...TGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp GGTAACTTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCCTACAATTCGATTGGTaGGCGCAGGGCTCAGAACTG +
Preference number: 4 (lower is better)
Translates to: GNLFLGNPASGAIHHPYGLQFDW*AQGSEL
Trigger: CAGTTCTGAGCCCTGCGCCCACCAATCGAATTGTAG...GCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAGTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp GTCACGGAGGAAGGCGCATCAGACCGCACAGGGGACGGCATCACCATTGATATTCTACAATTCGATTGGTaGGCGCAGGGCTCAGAACTG +
Preference number: 4 (lower is better)
Translates to: VTEEGASDRTGDGITIDILQFDW*AQGSEL
Trigger: CAGTTCTGAGCCCTGCGCCCACCAATCGAATTGTAG...AATATCAATGGTGATGCCGTCCCCTGTGCGGTCTGATGCGCCTTCCTCCGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp TCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAAGGGTAACTTGTTCTTaGGGAATCCAGCATCCGGTG +
Preference number: 4 (lower is better)
Translates to: SWGIQHPVPSITPTARVTRVTCS*GIQHPV
Trigger: CACCGGATGCTGGATTCCCCAAGAACAAGTTACCCT...TGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp CATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGAGGGTAACTTGTTCTTaGGGAATCCAGCATCCGGTG +
Preference number: 4 (lower is better)
Translates to: HPVPSITPTARVTTDSGGRVTCS*GIQHPV
Trigger: CACCGGATGCTGGATTCCCCAAGAACAAGTTACCCT...CCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp GTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGTTTAATGTCCCAGCTCGCTaGAATAGCCTCACCCCAGAG +
Preference number: 4 (lower is better)
Translates to: VPSITPTARVTTDSGGEFNVPAR*NSLTPE
Trigger: CTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACATT...AAACTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp CCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGTTTTGTCTTTCAAACAAGGGAGTGGGCCCCCATaGGGAAATGTCCCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: PYGTCDNRFRWGVLSFKQGSGPP*GNVPAR
Trigger: GCGAGCTGGGACATTTCCCCATGGGGGCCCACTCCC...TTGTTTGAAAGACAAAACTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp CTTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGGGGAAACCACCCTACTaGTCCCCTGTCATACATGTT +
Preference number: 4 (lower is better)
Translates to: LVLGESSIRCHPSPLRHVGKPPY*SPVIHV
Trigger: AACATGTATGACAGGGGACCAGTAGGGTGGTTTCCC...CACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp GGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGAGGGAAACCACCCTACTaGTCCCCTGTCATACATGTT +
Preference number: 4 (lower is better)
Translates to: GNPASGAIHHPYGTCDNRGKPPY*SPVIHV
Trigger: AACATGTATGACAGGGGACCAGTAGGGTGGTTTCCC...TCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR TCA 90 bp GGTAACTTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCGCATCTCTGCCTTGCTaGTATAGCCATTTCCGTCCA +
Preference number: 4 (lower is better)
Translates to: GNLFLGNPASGAIHHPYGASLPC*YSHFRP
Trigger: TGGACGGAAATGGCTATATCAGCAAGGCAGAGATGC...GCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAGTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR TCA 90 bp GGTAACTTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCTTTTGGCTCCTCGGATaGACTCTTCCAGGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: GNLFLGNPASGAIHHPYGFWLLG*TLPGRV
Trigger: AACTCTCCCTGGAAGAGTTCATCCGAGGAGCCAAAA...GCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAGTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR TCA 90 bp GGAAATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGCACGACAAAAGAAGCTaGAGGCGTCACGGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: GNVPARWNSLTPEGNLFLHDKRS*RRHGGR
Trigger: CCTTCCTCCGTGACGCCTTCAGCTTCTTTTGTCGTG...CAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR TCA 90 bp GGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGAGAGTCTGCAGAGTATTaGTCTGCTCAGAAAAGCACC +
Preference number: 4 (lower is better)
Translates to: GNPASGAIHHPYGTCDNRESAEY*SAQKST
Trigger: GGTGCTTTTCTGAGCAGATCAATACTCTGCAGACTC...TCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR TCA 90 bp GTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTGGTCCCCTGTCATACTACTTGCAAGAGTATaGCTCGCCTGTAACCAGCAA +
Preference number: 4 (lower is better)
Translates to: VNGLLGLRGKPPYWSPVILLARV*LACNQQ
Trigger: TTGCTGGTTACAGGCGAGTCATACTCTTGCAAGTAG...TATGACAGGGGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR TCA 90 bp GTCACGGAGGAAGGCGCATCAGACCGCACAGGGGACGGCATCACCATTGATATTTCCCTTGGCCAAACTTaGGTGCACTGGATTCGACAT +
Preference number: 4 (lower is better)
Translates to: VTEEGASDRTGDGITIDISLGQT*VHWIRH
Trigger: ATGTCGAATCCAGTGCACTCAAGTTTGGCCAAGGGA...AATATCAATGGTGATGCCGTCCCCTGTGCGGTCTGATGCGCCTTCCTCCGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp CATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGAGATTTAACAGTCCATaGTCTGCAGCCCCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: HPVPSITPTARVTTDSGGRFNSP*SAAPGN
Trigger: GTTTCCAGGGGCTGCAGAGCATGGACTGTTAAATCT...CCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220931.11
ENST00000522951.5
CDS-3UTR GCA 90 bp TCTAATGCTGTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTGGTCCGCGGAAGACATGCTCTaGAAATTTGGAAGCATCCCC +
Preference number: 4 (lower is better)
Translates to: SNAVNGLLGLRGKPPYWSAEDML*KFGSIP
Trigger: GGGGATGCTTCCAAATTTGCAGAGCATGTCTTCCGC...GGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGACAGCATTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR GCA 90 bp GTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTGGTCCCCTGTCATACATTTGCATCGAAGGTaGGGAAGACATGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: VNGLLGLRGKPPYWSPVIHLHRR*GRHALQ
Trigger: TTGCAGAGCATGTCTTCCGCACCTTCGATGCAAATG...TATGACAGGGGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR GCA 90 bp CTTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGCATTTGCATCGAAGGTaGGGAAGACATGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: LVLGESSIRCHPSPLRHVHLHRR*GRHALQ
Trigger: TTGCAGAGCATGTCTTCCGCACCTTCGATGCAAATG...CACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR GCA 90 bp GCTCTGGGCATTCCCACGAAGCATCCACGACAAAAGAAGCTGAAGGCGTCACGGTGTCCCATCTCCATTTaGATCGAAGGTGCGGAAGAC +
Preference number: 4 (lower is better)
Translates to: ALGIPTKHPRQKKLKASRCPISI*IEGAED
Trigger: GTCTTCCGCACCTTCGATGCAAATGGAGATGGGACA...CCGTGACGCCTTCAGCTTCTTTTGTCGTGGATGCTTCGTGGGAATGCCCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR GCA 90 bp CCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGTTTTGTCTTTCAAACAACTGCTCGGGTCGCACTaGAGGAGGCGCACAATGGAC +
Preference number: 4 (lower is better)
Translates to: PYGTCDNRFRWGVLSFKQLLGSH*RRRTMD
Trigger: GTCCATTGTGCGCCTCCTGCAGTGCGACCCGAGCAG...TTGTTTGAAAGACAAAACTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR GCA 90 bp GTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGTTTCACGAAGTCTGTCCATaGTCTCCACAAGCACACTGG +
Preference number: 4 (lower is better)
Translates to: VPSITPTARVTTDSGGEFHEVCP*SPQAHW
Trigger: CCAGTGTGCTTGTGGAGAGCATGGACAGACTTCGTG...AAACTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR GCA 90 bp CCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGAAGCCCCTTGAAGCTTaGAATAGAATCACAGGACTG +
Preference number: 4 (lower is better)
Translates to: PVPSITPTARVTTDSGGEKPLEA*NRITGL
Trigger: CAGTCCTGTGATTCTATTGCAAGCTTCAAGGGGCTT...CTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR GCA 90 bp TTCTGGGTGCTGTGGAGTCCCTTGGCCAAACTTGAGTGCACTGGATTCGACATACACCTGCTCTGCATCTaGCCTCTAGGCATGGCCACT +
Preference number: 4 (lower is better)
Translates to: FWVLWSPLAKLECTGFDIHLLCI*PLGMAT
Trigger: AGTGGCCATGCCTAGAGGGCAGATGCAGAGCAGGTG...TATGTCGAATCCAGTGCACTCAAGTTTGGCCAAGGGACTCCACAGCACCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp TGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGAATCCAGCATCCGGTCACTACCACCTGCTCTaGATCTGCCCTCTAGGCATG +
Preference number: 4 (lower is better)
Translates to: WNSLTPEGNLFLGNPASGHYHLL*ICPLGM
Trigger: CATGCCTAGAGGGCAGATGCAGAGCAGGTGGTAGTG...ACCGGATGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR GCA 90 bp GTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTGGTCCCCTGTCATATCTCCTCACCCAGTCTaGCTTCTGTGTCTTAGGTTA +
Preference number: 4 (lower is better)
Translates to: VNGLLGLRGKPPYWSPVISPHPV*LLCLRL
Trigger: TAACCTAAGACACAGAAGGCAGACTGGGTGAGGAGA...TATGACAGGGGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp GCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGAATCCAGCATCCGCTACAATTCGATTGGTaGGCGCAGGGCTCAGAACTG +
Preference number: 4 (lower is better)
Translates to: AGIASPQRVTCSWGIQHPLQFDW*AQGSEL
Trigger: CAGTTCTGAGCCCTGCGCCCACCAATCGAATTGTAG...CGGATGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp GTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTGGTCCCCTGTCATAAATCACAGGACTGGATaGGTTTCCCTTCTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: VNGLLGLRGKPPYWSPVINHRTG*VSLLLP
Trigger: GGGCAAAAGAAGGGAAACCCATCCAGTCCTGTGATT...TATGACAGGGGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp CATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGAATCACAGGACTGGATaGGTTTCCCTTCTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: HPVPSITPTARVTTDSGGNHRTG*VSLLLP
Trigger: GGGCAAAAGAAGGGAAACCCATCCAGTCCTGTGATT...CCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp TTCTGGGTGCTGTGGAGTCCCTTGGCCAAACTTGAGTGCACTGGATTCGACATAGAAACTACAGCCTGCTaGGGAAGAGAGGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: FWVLWSPLAKLECTGFDIETTAC*GREGSG
Trigger: CCCACTCCCCTCTCTTCCCCAGCAGGCTGTAGTTTC...TATGTCGAATCCAGTGCACTCAAGTTTGGCCAAGGGACTCCACAGCACCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp AGGGTAACTTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGTTCCAAGGAACAGAGTaGGTCTGGCTCAGCGAGATG +
Preference number: 4 (lower is better)
Translates to: RVTCSWGIQHPVPSITPTFQGTE*VWLSEM
Trigger: CATCTCGCTGAGCCAGACCCACTCTGTTCCTTGGAA...CGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAGTTACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp GTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGTTTTTCCAAGGAACAGAGTaGGTCTGGCTCAGCGAGATG +
Preference number: 4 (lower is better)
Translates to: VPSITPTARVTTDSGGEFFQGTE*VWLSEM
Trigger: CATCTCGCTGAGCCAGACCCACTCTGTTCCTTGGAA...AAACTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp ATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGATTCCAAGGAACAGAGTaGGTCTGGCTCAGCGAGATG +
Preference number: 4 (lower is better)
Translates to: MSQLAGIASPQRVTCSWGFQGTE*VWLSEM
Trigger: CATCTCGCTGAGCCAGACCCACTCTGTTCCTTGGAA...TCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR TCA 90 bp GTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTGGTCCCCTGTCATACTTAAACTCTTCCATTaGCAAATGTCCACTGGGGCA +
Preference number: 4 (lower is better)
Translates to: VNGLLGLRGKPPYWSPVILKLFH*QMSTGA
Trigger: TGCCCCAGTGGACATTTGTCAATGGAAGAGTTTAAG...TATGACAGGGGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR TCA 90 bp CCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGTCTTTTCTCTGGGGTTaGCTCATCTTCAGGCATTTT +
Preference number: 4 (lower is better)
Translates to: PVPSITPTARVTTDSGGESFLWG*LIFRHF
Trigger: AAAATGCCTGAAGATGAGTCAACCCCAGAGAAAAGA...CTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR TCA 90 bp AGGGTAACTTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGTTTTGGCTCCTCGGATaGACTCTTCCAGGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: RVTCSWGIQHPVPSITPTFWLLG*TLPGRV
Trigger: AACTCTCCCTGGAAGAGTTCATCCGAGGAGCCAAAA...CGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAGTTACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR TCA 90 bp GTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGTTTTTTTGGCTCCTCGGATaGACTCTTCCAGGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: VPSITPTARVTTDSGGEFFWLLG*TLPGRV
Trigger: AACTCTCCCTGGAAGAGTTCATCCGAGGAGCCAAAA...AAACTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCAC
53% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR TCA 90 bp TTCTGGGTGCTGTGGAGTCCCTTGGCCAAACTTGAGTGCACTGGATTCGACATACACGACAAAAGAAGCTaGAGGCGTCACGGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: FWVLWSPLAKLECTGFDIHDKRS*RRHGGR
Trigger: CCTTCCTCCGTGACGCCTTCAGCTTCTTTTGTCGTG...TATGTCGAATCCAGTGCACTCAAGTTTGGCCAAGGGACTCCACAGCACCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR TCA 90 bp TCTAATGCTGTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTGGTCCGAGTCTGCAGAGTATTaGTCTGCTCAGAAAAGCACC +
Preference number: 4 (lower is better)
Translates to: SNAVNGLLGLRGKPPYWSESAEY*SAQKST
Trigger: GGTGCTTTTCTGAGCAGATCAATACTCTGCAGACTC...GGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGACAGCATTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR TCA 90 bp GGTAACTTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCAGCTCCCTCCCACTCTaGATGATGTATGAACAGTTG +
Preference number: 4 (lower is better)
Translates to: GNLFLGNPASGAIHHPYGSSLPL*MMYEQL
Trigger: CAACTGTTCATACATCATTCAGAGTGGGAGGGAGCT...GCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAGTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR TCA 90 bp GGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGACAAGAATTCAGTTTCTaGCTGTCAGCAACGAGTGGT +
Preference number: 4 (lower is better)
Translates to: GNPASGAIHHPYGTCDNRQEFSF*LSATSG
Trigger: ACCACTCGTTGCTGACAGTCAGAAACTGAATTCTTG...TCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395923.5
ENST00000521599.5
CDS-3UTR GCA 90 bp GTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGTTTGCGGAAGACATGCTCTaGAAATTTGGAAGCATCCCC +
Preference number: 4 (lower is better)
Translates to: VPSITPTARVTTDSGGEFAEDML*KFGSIP
Trigger: GGGGATGCTTCCAAATTTGCAGAGCATGTCTTCCGC...AAACTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR GCA 90 bp AGGGTAACTTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGTGTCCCATCTCCATTTaGATCGAAGGTGCGGAAGAC +
Preference number: 4 (lower is better)
Translates to: RVTCSWGIQHPVPSITPTCPISI*IEGAED
Trigger: GTCTTCCGCACCTTCGATGCAAATGGAGATGGGACA...CGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAGTTACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR GCA 90 bp ATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGATGTCCCATCTCCATTTaGATCGAAGGTGCGGAAGAC +
Preference number: 4 (lower is better)
Translates to: MSQLAGIASPQRVTCSWGCPISI*IEGAED
Trigger: GTCTTCCGCACCTTCGATGCAAATGGAGATGGGACA...TCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR GCA 90 bp AGTGACATAAACCTTGAGGCATGCAGTCTTCTGGGTGCTGTGGAGTCCCTTGGCCACGAAGTCTGTCCATaGTCTCCACAAGCACACTGG +
Preference number: 4 (lower is better)
Translates to: SDINLEACSLLGAVESLGHEVCP*SPQAHW
Trigger: CCAGTGTGCTTGTGGAGAGCATGGACAGACTTCGTG...GCCAAGGGACTCCACAGCACCCAGAAGACTGCATGCCTCAAGGTTTATGTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp GTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTGGTCCCCTGTCATAAAGCCCCTTGAAGCTTaGAATAGAATCACAGGACTG +
Preference number: 4 (lower is better)
Translates to: VNGLLGLRGKPPYWSPVIKPLEA*NRITGL
Trigger: CAGTCCTGTGATTCTATTGCAAGCTTCAAGGGGCTT...TATGACAGGGGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR GCA 90 bp TCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAAAGCCCCTTGAAGCTTaGAATAGAATCACAGGACTG +
Preference number: 4 (lower is better)
Translates to: SWGIQHPVPSITPTARVTKPLEA*NRITGL
Trigger: CAGTCCTGTGATTCTATTGCAAGCTTCAAGGGGCTT...TGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR GCA 90 bp GCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGAATCCAGCATCCGTTAGAAACTACAGCCTaGTGGGGAAGAGAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: AGIASPQRVTCSWGIQHPLETTA*WGREGS
Trigger: ACTCCCCTCTCTTCCCCAGCAGGCTGTAGTTTCTAA...CGGATGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR GCA 90 bp GTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGTTTCTCAGAAAAGCACCATaGCGCCAGTCTAATGCTGTC +
Preference number: 4 (lower is better)
Translates to: VPSITPTARVTTDSGGEFLRKAP*RQSNAV
Trigger: GACAGCATTAGACTGGCGGCATGGTGCTTTTCTGAG...AAACTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR GCA 90 bp GCTCTGGGCATTCCCACGAAGCATCCACGACAAAAGAAGCTGAAGGCGTCACGGCGGCATTCATCAGCCTaGATGTGGCTCACTTTTCTT +
Preference number: 4 (lower is better)
Translates to: ALGIPTKHPRQKKLKASRRHSSA*MWLTFL
Trigger: AAGAAAAGTGAGCCACATGCAGGCTGATGAATGCCG...CCGTGACGCCTTCAGCTTCTTTTGTCGTGGATGCTTCGTGGGAATGCCCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp GTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTGGTCCCCTGTCATACATGCTCTGCAAATTTaGAAGCATCCCCATAAGGGA +
Preference number: 4 (lower is better)
Translates to: VNGLLGLRGKPPYWSPVIHALQI*KHPHKG
Trigger: TCCCTTATGGGGATGCTTCCAAATTTGCAGAGCATG...TATGACAGGGGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp CATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGCATGCTCTGCAAATTTaGAAGCATCCCCATAAGGGA +
Preference number: 4 (lower is better)
Translates to: HPVPSITPTARVTTDSGGHALQI*KHPHKG
Trigger: TCCCTTATGGGGATGCTTCCAAATTTGCAGAGCATG...CCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp TCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACACATGCTCTGCAAATTTaGAAGCATCCCCATAAGGGA +
Preference number: 4 (lower is better)
Translates to: SWGIQHPVPSITPTARVTHALQI*KHPHKG
Trigger: TCCCTTATGGGGATGCTTCCAAATTTGCAGAGCATG...TGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp AGTGACATAAACCTTGAGGCATGCAGTCTTCTGGGTGCTGTGGAGTCCCTTGGCGCTCTACAATTCGATTaGTGGGCGCAGGGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: SDINLEACSLLGAVESLGALQFD*WAQGSE
Trigger: TTCTGAGCCCTGCGCCCACCAATCGAATTGTAGAGC...GCCAAGGGACTCCACAGCACCCAGAAGACTGCATGCCTCAAGGTTTATGTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp GGGCCTCCCTTTGCTAACTACTTGCAAGAGTATGACTCGCCTGTAACCAGCAAAAGCACACTGGGGCTCTaGGCATTCCCACGAAGCATC +
Preference number: 4 (lower is better)
Translates to: GPPFANYLQEYDSPVTSKSTLGL*AFPRSI
Trigger: GATGCTTCGTGGGAATGCCCAGAGCCCCAGTGTGCT...TTTGCTGGTTACAGGCGAGTCATACTCTTGCAAGTAGTTAGCAAAGGGAGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp GGGCCTCCCTTTGCTAACTACTTGCAAGAGTATGACTCGCCTGTAACCAGCAAATCTCCACAAGCACACTaGGGCTCTGGGCATTCCCAC +
Preference number: 4 (lower is better)
Translates to: GPPFANYLQEYDSPVTSKSPQAH*GSGHSH
Trigger: GTGGGAATGCCCAGAGCCCCAGTGTGCTTGTGGAGA...TTTGCTGGTTACAGGCGAGTCATACTCTTGCAAGTAGTTAGCAAAGGGAGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp TCTGCATTCAAAGAGCACGGCAATGGAAAATACTTTTGGATTCTCCATAGGGGGGGGAGTGGGCCCCCATaGGGAAATGTCCCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: SAFKEHGNGKYFWILHRGGSGPP*GNVPAR
Trigger: GCGAGCTGGGACATTTCCCCATGGGGGCCCACTCCC...CCCCCTATGGAGAATCCAAAAGTATTTTCCATTGCCGTGCTCTTTGAATGCAGA
53% GC, longest homopolymer 8 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp ATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGAGGGAAACCACCCTACTaGTCCCCTGTCATACATGTT +
Preference number: 4 (lower is better)
Translates to: MSQLAGIASPQRVTCSWGGKPPY*SPVIHV
Trigger: AACATGTATGACAGGGGACCAGTAGGGTGGTTTCCC...TCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp CATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGCTCTTCTTTGGCAAGTaGCTTGGCAGCAAATATACC +
Preference number: 4 (lower is better)
Translates to: HPVPSITPTARVTTDSGGLFFGK*LGSKYT
Trigger: GGTATATTTGCTGCCAAGCCACTTGCCAAAGAAGAG...CCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp GTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTGGTCCCCTGTCATACTCTTCTTTGGCAAGTaGCTTGGCAGCAAATATACC +
Preference number: 4 (lower is better)
Translates to: VNGLLGLRGKPPYWSPVILFFGK*LGSKYT
Trigger: GGTATATTTGCTGCCAAGCCACTTGCCAAAGAAGAG...TATGACAGGGGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp TGCCGCCAGTCTAATGCTGTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCGAATTTGGCAAGTTTTaGTACAGAACCACTGTGAGG +
Preference number: 4 (lower is better)
Translates to: CRQSNAVNGLLGLRGKPPEFGKF*YRTTVR
Trigger: CCTCACAGTGGTTCTGTACCAAAACTTGCCAAATTC...GGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGACAGCATTAGACTGGCGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp GGGCCTCCCTTTGCTAACTACTTGCAAGAGTATGACTCGCCTGTAACCAGCAAATACAGACAGGGTCAGTaGCAGGCCAGGACAGGGACT +
Preference number: 4 (lower is better)
Translates to: GPPFANYLQEYDSPVTSKYRQGQ*QARTGT
Trigger: AGTCCCTGTCCTGGCCTGCCACTGACCCTGTCTGTA...TTTGCTGGTTACAGGCGAGTCATACTCTTGCAAGTAGTTAGCAAAGGGAGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp AGTGACATAAACCTTGAGGCATGCAGTCTTCTGGGTGCTGTGGAGTCCCTTGGCGTCTTCTGGGTGCTGTaGAGTCCCTTGGCCAAACTT +
Preference number: 4 (lower is better)
Translates to: SDINLEACSLLGAVESLGVFWVL*SPLAKL
Trigger: AAGTTTGGCCAAGGGACTCCACAGCACCCAGAAGAC...GCCAAGGGACTCCACAGCACCCAGAAGACTGCATGCCTCAAGGTTTATGTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp TCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACATTATTAAATCCACCGTaGGCATACAGATGGGATGGG +
Preference number: 4 (lower is better)
Translates to: SWGIQHPVPSITPTARVTLLNPP*AYRWDG
Trigger: CCCATCCCATCTGTATGCCCACGGTGGATTTAATAA...TGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp TGCCGCCAGTCTAATGCTGTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCCAGAAGAAATCACTCTaGGAATTCGGAGGAGTGATA +
Preference number: 4 (lower is better)
Translates to: CRQSNAVNGLLGLRGKPPQKKSL*EFGGVI
Trigger: TATCACTCCTCCGAATTCCCAGAGTGATTTCTTCTG...GGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGACAGCATTAGACTGGCGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521599.5
CDS-3UTR TCA 90 bp TTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTCTTAAACTCTTCCATTaGCAAATGTCCACTGGGGCA +
Preference number: 4 (lower is better)
Translates to: LFLGNPASGAIHHPYGTCLKLFH*QMSTGA
Trigger: TGCCCCAGTGGACATTTGTCAATGGAAGAGTTTAAG...ACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR TCA 90 bp GTCACGGAGGAAGGCGCATCAGACCGCACAGGGGACGGCATCACCATTGATATTCTTAAACTCTTCCATTaGCAAATGTCCACTGGGGCA +
Preference number: 4 (lower is better)
Translates to: VTEEGASDRTGDGITIDILKLFH*QMSTGA
Trigger: TGCCCCAGTGGACATTTGTCAATGGAAGAGTTTAAG...AATATCAATGGTGATGCCGTCCCCTGTGCGGTCTGATGCGCCTTCCTCCGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR TCA 90 bp GGTAACTTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCCTTAAACTCTTCCATTaGCAAATGTCCACTGGGGCA +
Preference number: 4 (lower is better)
Translates to: GNLFLGNPASGAIHHPYGLKLFH*QMSTGA
Trigger: TGCCCCAGTGGACATTTGTCAATGGAAGAGTTTAAG...GCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAGTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR TCA 90 bp TCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACATCTTTTCTCTGGGGTTaGCTCATCTTCAGGCATTTT +
Preference number: 4 (lower is better)
Translates to: SWGIQHPVPSITPTARVTSFLWG*LIFRHF
Trigger: AAAATGCCTGAAGATGAGTCAACCCCAGAGAAAAGA...TGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR TCA 90 bp AGTGACATAAACCTTGAGGCATGCAGTCTTCTGGGTGCTGTGGAGTCCCTTGGCCCCCATCAACAACCTTaGGAATTTGGGCCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: SDINLEACSLLGAVESLGPHQQP*EFGPPF
Trigger: AAAGGGAGGCCCAAATTCTCAAGGTTGTTGATGGGG...GCCAAGGGACTCCACAGCACCCAGAAGACTGCATGCCTCAAGGTTTATGTCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR TCA 90 bp GAAGCTTGCAATAGAATCACAGGACTGGATGGGTTTCCCTTCTTTTGCCCCAACCTCAGCGAGATGTCATaGCTAAGGGCAGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: EACNRITGLDGFPFFCPNLSEMS*LRAEPR
Trigger: CCTGGGCTCTGCCCTTAGTCATGACATCTCGCTGAG...GTTGGGGCAAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTATTGCAAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR TCA 90 bp GTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGTTTAGCTCCCTCCCACTCTaGATGATGTATGAACAGTTG +
Preference number: 4 (lower is better)
Translates to: VPSITPTARVTTDSGGEFSSLPL*MMYEQL
Trigger: CAACTGTTCATACATCATTCAGAGTGGGAGGGAGCT...AAACTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR TCA 90 bp AGGGTAACTTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGAGCTACACAGTCAACTaGTTTACGGGCCACTCCATA +
Preference number: 4 (lower is better)
Translates to: RVTCSWGIQHPVPSITPTSYTVN*FTGHSI
Trigger: TATGGAGTGGCCCGTAAATCAGTTGACTGTGTAGCT...CGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAGTTACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp GGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGACATTCCTGGATCTCATaGTCTGTAAAGTCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: GNPASGAIHHPYGTCDNRHSWIS*SVKSVL
Trigger: AAGCACAGACTTTACAGAGCATGAGATCCAGGAATG...TCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR GCA 90 bp TCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACACATTCCTGGATCTCATaGTCTGTAAAGTCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: SWGIQHPVPSITPTARVTHSWIS*SVKSVL
Trigger: AAGCACAGACTTTACAGAGCATGAGATCCAGGAATG...TGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR GCA 90 bp GGAAATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGCGGAAGACATGCTCTaGAAATTTGGAAGCATCCCC +
Preference number: 4 (lower is better)
Translates to: GNVPARWNSLTPEGNLFLAEDML*KFGSIP
Trigger: GGGGATGCTTCCAAATTTGCAGAGCATGTCTTCCGC...CAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR GCA 90 bp TCTAATGCTGTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTGGTCCAAGCCCCTTGAAGCTTaGAATAGAATCACAGGACTG +
Preference number: 4 (lower is better)
Translates to: SNAVNGLLGLRGKPPYWSKPLEA*NRITGL
Trigger: CAGTCCTGTGATTCTATTGCAAGCTTCAAGGGGCTT...GGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGACAGCATTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR GCA 90 bp CATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGATGTTAACATTCCTGTaGTCCAATTGTCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: HPVPSITPTARVTTDSGGMLTFL*SNCPVP
Trigger: TGGGACAGGACAATTGGAGCACAGGAATGTTAACAT...CCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR GCA 90 bp AGTGACATAAACCTTGAGGCATGCAGTCTTCTGGGTGCTGTGGAGTCCCTTGGCCTCAGAAAAGCACCATaGCGCCAGTCTAATGCTGTC +
Preference number: 4 (lower is better)
Translates to: SDINLEACSLLGAVESLGLRKAP*RQSNAV
Trigger: GACAGCATTAGACTGGCGGCATGGTGCTTTTCTGAG...GCCAAGGGACTCCACAGCACCCAGAAGACTGCATGCCTCAAGGTTTATGTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp GGAAATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGCTCAGAAAAGCACCATaGCGCCAGTCTAATGCTGTC +
Preference number: 4 (lower is better)
Translates to: GNVPARWNSLTPEGNLFLLRKAP*RQSNAV
Trigger: GACAGCATTAGACTGGCGGCATGGTGCTTTTCTGAG...CAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR GCA 90 bp GCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGAATCCAGCATCCGTCTCCTCACCCAGTCTaGCTTCTGTGTCTTAGGTTA +
Preference number: 4 (lower is better)
Translates to: AGIASPQRVTCSWGIQHPSPHPV*LLCLRL
Trigger: TAACCTAAGACACAGAAGGCAGACTGGGTGAGGAGA...CGGATGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp GGGCCTCCCTTTGCTAACTACTTGCAAGAGTATGACTCGCCTGTAACCAGCAAAATGCAGTCTTCTGGGTaGTGTGGAGTCCCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: GPPFANYLQEYDSPVTSKMQSSG*CGVPWP
Trigger: TGGCCAAGGGACTCCACAGCACCCAGAAGACTGCAT...TTTGCTGGTTACAGGCGAGTCATACTCTTGCAAGTAGTTAGCAAAGGGAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp GCTCTGGGCATTCCCACGAAGCATCCACGACAAAAGAAGCTGAAGGCGTCACGGCACCAGGAGATCAGATaGCTTGCAATTTCTGACTGT +
Preference number: 4 (lower is better)
Translates to: ALGIPTKHPRQKKLKASRHQEIR*LAISDC
Trigger: ACAGTCAGAAATTGCAAGGCATCTGATCTCCTGGTG...CCGTGACGCCTTCAGCTTCTTTTGTCGTGGATGCTTCGTGGGAATGCCCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311028.4
CDS-3UTR CCA 90 bp GGTAACTTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCCATGCTCTGCAAATTTaGAAGCATCCCCATAAGGGA +
Preference number: 4 (lower is better)
Translates to: GNLFLGNPASGAIHHPYGHALQI*KHPHKG
Trigger: TCCCTTATGGGGATGCTTCCAAATTTGCAGAGCATG...GCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAGTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp GTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGTTTGTTTTCCGTCTCTATTaGTGTCCATCTGGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: VPSITPTARVTTDSGGEFVFRLY*CPSGGR
Trigger: TCTTCCGCCAGATGGACACCAATAGAGACGGAAAAC...AAACTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp CCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGTTTTGTCTTTCAAACAAAGCACACTGGGGCTCTaGGCATTCCCACGAAGCATC +
Preference number: 4 (lower is better)
Translates to: PYGTCDNRFRWGVLSFKQSTLGL*AFPRSI
Trigger: GATGCTTCGTGGGAATGCCCAGAGCCCCAGTGTGCT...TTGTTTGAAAGACAAAACTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp GAAGCTTGCAATAGAATCACAGGACTGGATGGGTTTCCCTTCTTTTGCCCCAACTCTCCACAAGCACACTaGGGCTCTGGGCATTCCCAC +
Preference number: 4 (lower is better)
Translates to: EACNRITGLDGFPFFCPNSPQAH*GSGHSH
Trigger: GTGGGAATGCCCAGAGCCCCAGTGTGCTTGTGGAGA...GTTGGGGCAAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTATTGCAAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp CCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGATAGAATCACAGGACTaGATGGGTTTCCCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: PVPSITPTARVTTDSGGEIESQD*MGFPSF
Trigger: AAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTAT...CTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp CCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGTTTTGTCTTTCAAACAAGAAACTACAGCCTGCTaGGGAAGAGAGGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: PYGTCDNRFRWGVLSFKQETTAC*GREGSG
Trigger: CCCACTCCCCTCTCTTCCCCAGCAGGCTGTAGTTTC...TTGTTTGAAAGACAAAACTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp GGAAATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGAAACCACCCTACTaGTCCCCTGTCATACATGTT +
Preference number: 4 (lower is better)
Translates to: GNVPARWNSLTPEGNLFLGKPPY*SPVIHV
Trigger: AACATGTATGACAGGGGACCAGTAGGGTGGTTTCCC...CAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp GCTCTGGGCATTCCCACGAAGCATCCACGACAAAAGAAGCTGAAGGCGTCACGGCTCTTCTTTGGCAAGTaGCTTGGCAGCAAATATACC +
Preference number: 4 (lower is better)
Translates to: ALGIPTKHPRQKKLKASRLFFGK*LGSKYT
Trigger: GGTATATTTGCTGCCAAGCCACTTGCCAAAGAAGAG...CCGTGACGCCTTCAGCTTCTTTTGTCGTGGATGCTTCGTGGGAATGCCCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp TCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAGAATTTGGCAAGTTTTaGTACAGAACCACTGTGAGG +
Preference number: 4 (lower is better)
Translates to: SWGIQHPVPSITPTARVTEFGKF*YRTTVR
Trigger: CCTCACAGTGGTTCTGTACCAAAACTTGCCAAATTC...TGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp GAAGCTTGCAATAGAATCACAGGACTGGATGGGTTTCCCTTCTTTTGCCCCAACTACAGACAGGGTCAGTaGCAGGCCAGGACAGGGACT +
Preference number: 4 (lower is better)
Translates to: EACNRITGLDGFPFFCPNYRQGQ*QARTGT
Trigger: AGTCCCTGTCCTGGCCTGCCACTGACCCTGTCTGTA...GTTGGGGCAAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTATTGCAAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp CCCCTTGAAGCTTGCAATAGAATCACAGGACTGGATGGGTTTCCCTTCTTTTGCTGCCTCCTCGGGTCCTaGGAGGTCAGATTCAGCCTA +
Preference number: 4 (lower is better)
Translates to: PLEACNRITGLDGFPFFCCLLGS*EVRFSL
Trigger: TAGGCTGAATCTGACCTCCCAGGACCCGAGGAGGCA...GCAAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTATTGCAAGCTTCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395923.5
CDS-3UTR TCA 90 bp TCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAAAAATCATCAAACAATaGACACCACGAAGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: SWGIQHPVPSITPTARVTKIIKQ*TPRSLS
Trigger: GGACAGACTTCGTGGTGTTCATTGTTTGATGATTTT...TGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR TCA 90 bp GCTCTGGGCATTCCCACGAAGCATCCACGACAAAAGAAGCTGAAGGCGTCACGGGTGCAAAGACAGATATaGCTTCCAAACAAGACAGAC +
Preference number: 4 (lower is better)
Translates to: ALGIPTKHPRQKKLKASRVQRQI*LPNKTD
Trigger: GTCTGTCTTGTTTGGAAGTCATATCTGTCTTTGCAC...CCGTGACGCCTTCAGCTTCTTTTGTCGTGGATGCTTCGTGGGAATGCCCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR TCA 90 bp TCTGCATTCAAAGAGCACGGCAATGGAAAATACTTTTGGATTCTCCATAGGGGGATGGGCTGCTGGGCCTaGGAGGGAAACCACCCTACT +
Preference number: 4 (lower is better)
Translates to: SAFKEHGNGKYFWILHRGMGCWA*EGNHPT
Trigger: AGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCAT...CCCCCTATGGAGAATCCAAAAGTATTTTCCATTGCCGTGCTCTTTGAATGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR TCA 90 bp GGGTCAGTGGCAGGCCAGGACAGGGACTATTTCTATACATTCTGGAAGTGTCGGAGCTACACAGTCAACTaGTTTACGGGCCACTCCATA +
Preference number: 4 (lower is better)
Translates to: GSVAGQDRDYFYTFWKCRSYTVN*FTGHSI
Trigger: TATGGAGTGGCCCGTAAATCAGTTGACTGTGTAGCT...CCGACACTTCCAGAATGTATAGAAATAGTCCCTGTCCTGGCCTGCCACTGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR TCA 90 bp GCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGAATCCAGCATCCGCAAGAATTCAGTTTCTaGCTGTCAGCAACGAGTGGT +
Preference number: 4 (lower is better)
Translates to: AGIASPQRVTCSWGIQHPQEFSF*LSATSG
Trigger: ACCACTCGTTGCTGACAGTCAGAAACTGAATTCTTG...CGGATGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395923.5
ENST00000521599.5
CDS-3UTR GCA 90 bp CCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGTTTTGTCTTTCAAACAAGCCCATTTCAGCTTCTaGTCCAGCTTCCCCCTCGAA +
Preference number: 4 (lower is better)
Translates to: PYGTCDNRFRWGVLSFKQAHFSF*SSFPLE
Trigger: TTCGAGGGGGAAGCTGGAGCAGAAGCTGAAATGGGC...TTGTTTGAAAGACAAAACTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR GCA 90 bp GCTGTCACTTCTGGAAATAGAAGTCTGCATTCAAAGAGCACGGCAATGGAAAATCTGCTCGGGTCGCACTaGAGGAGGCGCACAATGGAC +
Preference number: 4 (lower is better)
Translates to: AVTSGNRSLHSKSTAMENLLGSH*RRRTMD
Trigger: GTCCATTGTGCGCCTCCTGCAGTGCGACCCGAGCAG...ATTTTCCATTGCCGTGCTCTTTGAATGCAGACTTCTATTTCCAGAAGTGACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp ATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGAAAGCCCCTTGAAGCTTaGAATAGAATCACAGGACTG +
Preference number: 4 (lower is better)
Translates to: MSQLAGIASPQRVTCSWGKPLEA*NRITGL
Trigger: CAGTCCTGTGATTCTATTGCAAGCTTCAAGGGGCTT...TCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR GCA 90 bp GAGGGAAACCACCCTACTGGTCCCCTGTCATACATGTTAACATTCCTGTGCTCCTTAGAAACTACAGCCTaGTGGGGAAGAGAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: EGNHPTGPLSYMLTFLCSLETTA*WGREGS
Trigger: ACTCCCCTCTCTTCCCCAGCAGGCTGTAGTTTCTAA...GGAGCACAGGAATGTTAACATGTATGACAGGGGACCAGTAGGGTGGTTTCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR GCA 90 bp CCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGCGATTGGTACATTTGTaGAAAGACAGATATGACTTC +
Preference number: 4 (lower is better)
Translates to: PVPSITPTARVTTDSGGERLVHL*KDRYDF
Trigger: GAAGTCATATCTGTCTTTGCACAAATGTACCAATCG...CTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR GCA 90 bp TCATCAAACAATGAACACCACGAAGTCTGTCCATGCTCTCCACAAGCACACTGGCACTACCACCTGCTCTaGATCTGCCCTCTAGGCATG +
Preference number: 4 (lower is better)
Translates to: SSNNEHHEVCPCSPQAHWHYHLL*ICPLGM
Trigger: CATGCCTAGAGGGCAGATGCAGAGCAGGTGGTAGTG...CCAGTGTGCTTGTGGAGAGCATGGACAGACTTCGTGGTGTTCATTGTTTGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR GCA 90 bp TGCCGCCAGTCTAATGCTGTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCGATGAATTTGATGACTaGCCAACCTCTGATTCTTTA +
Preference number: 4 (lower is better)
Translates to: CRQSNAVNGLLGLRGKPPDEFDD*PTSDSL
Trigger: TAAAGAATCAGAGGTTGGGCAGTCATCAAATTCATC...GGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGACAGCATTAGACTGGCGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000521599.5
CDS-3UTR GCA 90 bp GGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGAAACCACAGACACACTTaGCCATGTCTTTATGATGAA +
Preference number: 4 (lower is better)
Translates to: GNPASGAIHHPYGTCDNRNHRHT*PCLYDE
Trigger: TTCATCATAAAGACATGGGCAAGTGTGTCTGTGGTT...TCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000521599.5
CDS-3UTR GCA 90 bp ATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGACCTTTGCTAACTACTTaGAAGAGTATGACTCGCCTG +
Preference number: 4 (lower is better)
Translates to: MSQLAGIASPQRVTCSWGPLLTT*KSMTRL
Trigger: CAGGCGAGTCATACTCTTGCAAGTAGTTAGCAAAGG...TCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp GGTAACTTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCTTGGCCAAACTTGAGTaGACTGGATTCGACATACAA +
Preference number: 4 (lower is better)
Translates to: GNLFLGNPASGAIHHPYGLAKLE*TGFDIQ
Trigger: TTGTATGTCGAATCCAGTGCACTCAAGTTTGGCCAA...GCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAGTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp TTCTGGGTGCTGTGGAGTCCCTTGGCCAAACTTGAGTGCACTGGATTCGACATATCTGTTTCCCCATCCTaGCGGCAAGAATTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: FWVLWSPLAKLECTGFDISVSPS*RQEFSS
Trigger: TGAGCTGAATTCTTGCCGCCAGGATGGGGAAACAGA...TATGTCGAATCCAGTGCACTCAAGTTTGGCCAAGGGACTCCACAGCACCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220931.11
CDS-3UTR CCA 90 bp AGGGTAACTTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGCATGCTCTGCAAATTTaGAAGCATCCCCATAAGGGA +
Preference number: 4 (lower is better)
Translates to: RVTCSWGIQHPVPSITPTHALQI*KHPHKG
Trigger: TCCCTTATGGGGATGCTTCCAAATTTGCAGAGCATG...CGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAGTTACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp GACAGGGACTATTTCTATACATTCTGGAAGTGTCGGCATTCATCAGCCTGCATGAGCACACTGGGGCTCTaGGCATTCCCACGAAGCATC +
Preference number: 4 (lower is better)
Translates to: DRDYFYTFWKCRHSSACMSTLGL*AFPRSI
Trigger: GATGCTTCGTGGGAATGCCCAGAGCCCCAGTGTGCT...CATGCAGGCTGATGAATGCCGACACTTCCAGAATGTATAGAAATAGTCCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp GAGGGAAACCACCCTACTGGTCCCCTGTCATACATGTTAACATTCCTGTGCTCCAGGGTAACTTGTTCTTaGGGAATCCAGCATCCGGTG +
Preference number: 4 (lower is better)
Translates to: EGNHPTGPLSYMLTFLCSRVTCS*GIQHPV
Trigger: CACCGGATGCTGGATTCCCCAAGAACAAGTTACCCT...GGAGCACAGGAATGTTAACATGTATGACAGGGGACCAGTAGGGTGGTTTCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp CTTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGGCAACAAGATGGGTCTaGTTTTGGAATATGTTACCA +
Preference number: 4 (lower is better)
Translates to: LVLGESSIRCHPSPLRHVATRWV*FWNMLP
Trigger: TGGTAACATATTCCAAAACCAGACCCATCTTGTTGC...CACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp AGGGTAACTTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGCTTTGGCAAGTGGCTTaGCAGCAAATATACCCACTA +
Preference number: 4 (lower is better)
Translates to: RVTCSWGIQHPVPSITPTLWQVA*QQIYPL
Trigger: TAGTGGGTATATTTGCTGCCAAGCCACTTGCCAAAG...CGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAGTTACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp TCATCAAACAATGAACACCACGAAGTCTGTCCATGCTCTCCACAAGCACACTGGAGGCATGCAGTCTTCTaGGTGCTGTGGAGTCCCTTG +
Preference number: 4 (lower is better)
Translates to: SSNNEHHEVCPCSPQAHWRHAVF*VLWSPL
Trigger: CAAGGGACTCCACAGCACCCAGAAGACTGCATGCCT...CCAGTGTGCTTGTGGAGAGCATGGACAGACTTCGTGGTGTTCATTGTTTGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp TCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACATTGAACATCACAGGCTaGTTTTATTTGGGACAGAAC +
Preference number: 4 (lower is better)
Translates to: SWGIQHPVPSITPTARVTLNITG*FYLGQN
Trigger: GTTCTGTCCCAAATAAAACCAGCCTGTGATGTTCAA...TGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp AGGGTAACTTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGTTATTAAATCCACCGTaGGCATACAGATGGGATGGG +
Preference number: 4 (lower is better)
Translates to: RVTCSWGIQHPVPSITPTLLNPP*AYRWDG
Trigger: CCCATCCCATCTGTATGCCCACGGTGGATTTAATAA...CGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAGTTACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp TCTAATGCTGTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTGGTCCTCAGGAAGGACTTCGTaGAGGAGGAGGAATTTTAAA +
Preference number: 4 (lower is better)
Translates to: SNAVNGLLGLRGKPPYWSSGRTS*RRRNFK
Trigger: TTTAAAATTCCTCCTCCTCCACGAAGTCCTTCCTGA...GGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGACAGCATTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521599.5
CDS-3UTR CCA 90 bp TGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGAATCCAGCATCCGGTAAGAAGCGTCTCTATTaGTGTCCATCTGGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: WNSLTPEGNLFLGNPASGKKRLY*CPSGGR
Trigger: TCTTCCGCCAGATGGACACCAATAGAGACGCTTCTT...ACCGGATGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522951.5
3UTR CAA 72 bp CTCTCTTTCTGTGGTTCCTCTTCTTTGGCAAGTGGCTaGGCAGCAAATATACCCACTAGGGACCTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LSFCGSSSLASG*AANIPTRDLSA
Trigger: GGCAGAGAGGTCCCTAGTGGGTATATTTGCTGCCAAGCCACTTGCCAAAGAAGAGGAACCACAGAAAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR CAA 72 bp CAGTCTTCTGGGTGCTGTGGAGTCCCTTGGCCAAACTaGAGTGCACTGGATTCGACATACAAAGACCTTCCT +
Preference number: 4 (lower is better)
Translates to: QSSGCCGVPWPN*SALDSTYKDLP
Trigger: AGGAAGGTCTTTGTATGTCGAATCCAGTGCACTCAAGTTTGGCCAAGGGACTCCACAGCACCCAGAAGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR CAA 72 bp TTGAGGCATGCAGTCTTCTGGGTGCTGTGGAGTCCCTaGGCCAAACTTGAGTGCACTGGATTCGACATACAA +
Preference number: 4 (lower is better)
Translates to: LRHAVFWVLWSP*AKLECTGFDIQ
Trigger: TTGTATGTCGAATCCAGTGCACTCAAGTTTGGCCAAGGGACTCCACAGCACCCAGAAGACTGCATGCCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR TCA 90 bp ATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGACCAGGAGACCAAAGTTaGGATAATCTAGTGGTAGAT +
Preference number: 4 (lower is better)
Translates to: MSQLAGIASPQRVTCSWGPGDQS*DNLVVD
Trigger: ATCTACCACTAGATTATCTCAACTTTGGTCTCCTGG...TCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311028.4
ENST00000395923.5
ENST00000521599.5
CDS-3UTR TCA 90 bp GAGGGAAACCACCCTACTGGTCCCCTGTCATACATGTTAACATTCCTGTGCTCCATGCCTTGCAATTTCTaGCTGTCAGCAACGAGTGGT +
Preference number: 4 (lower is better)
Translates to: EGNHPTGPLSYMLTFLCSMPCNF*LSATSG
Trigger: ACCACTCGTTGCTGACAGTCAGAAATTGCAAGGCAT...GGAGCACAGGAATGTTAACATGTATGACAGGGGACCAGTAGGGTGGTTTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311028.4
CDS-3UTR GCA 90 bp ATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGACATTCCTGGATCTCATaGTCTGTAAAGTCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: MSQLAGIASPQRVTCSWGHSWIS*SVKSVL
Trigger: AAGCACAGACTTTACAGAGCATGAGATCCAGGAATG...TCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR GCA 90 bp ACGATTAAAAATCATCAAACAATGAACACCACGAAGTCTGTCCATGCTCTCCACCTGCTCGGGTCGCACTaGAGGAGGCGCACAATGGAC +
Preference number: 4 (lower is better)
Translates to: TIKNHQTMNTTKSVHALHLLGSH*RRRTMD
Trigger: GTCCATTGTGCGCCTCCTGCAGTGCGACCCGAGCAG...GTGGAGAGCATGGACAGACTTCGTGGTGTTCATTGTTTGATGATTTTTAATCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR GCA 90 bp CCCCTTGAAGCTTGCAATAGAATCACAGGACTGGATGGGTTTCCCTTCTTTTGCCACGAAGTCTGTCCATaGTCTCCACAAGCACACTGG +
Preference number: 4 (lower is better)
Translates to: PLEACNRITGLDGFPFFCHEVCP*SPQAHW
Trigger: CCAGTGTGCTTGTGGAGAGCATGGACAGACTTCGTG...GCAAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTATTGCAAGCTTCAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR GCA 90 bp ATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGAATGTTAACATTCCTGTaGTCCAATTGTCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: MSQLAGIASPQRVTCSWGMLTFL*SNCPVP
Trigger: TGGGACAGGACAATTGGAGCACAGGAATGTTAACAT...TCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR GCA 90 bp CATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGGATGAATTTGATGACTaGCCAACCTCTGATTCTTTA +
Preference number: 4 (lower is better)
Translates to: HPVPSITPTARVTTDSGGDEFDD*PTSDSL
Trigger: TAAAGAATCAGAGGTTGGGCAGTCATCAAATTCATC...CCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000521599.5
CDS-3UTR GCA 90 bp ATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGACTGGAAATAGAAGTCTaGATTCAAAGAGCACGGCAA +
Preference number: 4 (lower is better)
Translates to: MSQLAGIASPQRVTCSWGLEIEV*IQRARQ
Trigger: TTGCCGTGCTCTTTGAATGCAGACTTCTATTTCCAG...TCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp GGAAATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGCCTTTGCTAACTACTTaGAAGAGTATGACTCGCCTG +
Preference number: 4 (lower is better)
Translates to: GNVPARWNSLTPEGNLFLPLLTT*KSMTRL
Trigger: CAGGCGAGTCATACTCTTGCAAGTAGTTAGCAAAGG...CAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp GAGGGAAACCACCCTACTGGTCCCCTGTCATACATGTTAACATTCCTGTGCTCCGTTTTCCGTCTCTATTaGTGTCCATCTGGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: EGNHPTGPLSYMLTFLCSVFRLY*CPSGGR
Trigger: TCTTCCGCCAGATGGACACCAATAGAGACGGAAAAC...GGAGCACAGGAATGTTAACATGTATGACAGGGGACCAGTAGGGTGGTTTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp CCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGTTTTGTCTTTCAAACAACTACAATTCGATTGGTaGGCGCAGGGCTCAGAACTG +
Preference number: 4 (lower is better)
Translates to: PYGTCDNRFRWGVLSFKQLQFDW*AQGSEL
Trigger: CAGTTCTGAGCCCTGCGCCCACCAATCGAATTGTAG...TTGTTTGAAAGACAAAACTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp GAGGGAAACCACCCTACTGGTCCCCTGTCATACATGTTAACATTCCTGTGCTCCAATCACAGGACTGGATaGGTTTCCCTTCTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: EGNHPTGPLSYMLTFLCSNHRTG*VSLLLP
Trigger: GGGCAAAAGAAGGGAAACCCATCCAGTCCTGTGATT...GGAGCACAGGAATGTTAACATGTATGACAGGGGACCAGTAGGGTGGTTTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp AAATACAGACAGGGTCAGTGGCAGGCCAGGACAGGGACTATTTCTATACATTCTAATGTCCCAGCTCGCTaGAATAGCCTCACCCCAGAG +
Preference number: 4 (lower is better)
Translates to: KYRQGQWQARTGTISIHSNVPAR*NSLTPE
Trigger: CTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACATT...AGAATGTATAGAAATAGTCCCTGTCCTGGCCTGCCACTGACCCTGTCTGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp TCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAAGATGGGTCTGGTTTTaGAATATGTTACCATTTGTG +
Preference number: 4 (lower is better)
Translates to: SWGIQHPVPSITPTARVTRWVWF*NMLPFV
Trigger: CACAAATGGTAACATATTCCAAAACCAGACCCATCT...TGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp TTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGCAACAAGATGGGTCTaGTTTTGGAATATGTTACCA +
Preference number: 4 (lower is better)
Translates to: LFLGNPASGAIHHPYGTCATRWV*FWNMLP
Trigger: TGGTAACATATTCCAAAACCAGACCCATCTTGTTGC...ACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp TGCCGCCAGTCTAATGCTGTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCGCAAAACACTTAATTTaGTCTGCATTACCCAATATG +
Preference number: 4 (lower is better)
Translates to: CRQSNAVNGLLGLRGKPPAKHLI*SALPNM
Trigger: CATATTGGGTAATGCAGACCAAATTAAGTGTTTTGC...GGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGACAGCATTAGACTGGCGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp GGGTCAGTGGCAGGCCAGGACAGGGACTATTTCTATACATTCTGGAAGTGTCGGCTTTGGCAAGTGGCTTaGCAGCAAATATACCCACTA +
Preference number: 4 (lower is better)
Translates to: GSVAGQDRDYFYTFWKCRLWQVA*QQIYPL
Trigger: TAGTGGGTATATTTGCTGCCAAGCCACTTGCCAAAG...CCGACACTTCCAGAATGTATAGAAATAGTCCCTGTCCTGGCCTGCCACTGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp CTTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTTCACCCTATGGATTTaGTTCTTTTTGGTCTACCAT +
Preference number: 4 (lower is better)
Translates to: LVLGESSIRCHPSPLRHVFTLWI*FFLVYH
Trigger: ATGGTAGACCAAAAAGAACCAAATCCATAGGGTGAA...CACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp GTCACGGAGGAAGGCGCATCAGACCGCACAGGGGACGGCATCACCATTGATATTACAGATTTTAACACTTaGCCATGGAGGAATTTGGCA +
Preference number: 4 (lower is better)
Translates to: VTEEGASDRTGDGITIDITDFNT*PWRNLA
Trigger: TGCCAAATTCCTCCATGGCCAAGTGTTAAAATCTGT...AATATCAATGGTGATGCCGTCCCCTGTGCGGTCTGATGCGCCTTCCTCCGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp GACAGGGACTATTTCTATACATTCTGGAAGTGTCGGCATTCATCAGCCTGCATGCAGAGCAGGGAAAAGTaGGATGCAGCTCCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: DRDYFYTFWKCRHSSACMQSREK*DAAPEH
Trigger: GTGCTCAGGAGCTGCATCCCACTTTTCCCTGCTCTG...CATGCAGGCTGATGAATGCCGACACTTCCAGAATGTATAGAAATAGTCCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp GGAAATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGCTCACTTTTCTTTCTaGAATAGCCGGAGACCTCTA +
Preference number: 4 (lower is better)
Translates to: GNVPARWNSLTPEGNLFLAHFSF*NSRRPL
Trigger: TAGAGGTCTCCGGCTATTCCAGAAAGAAAAGTGAGC...CAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp TGCCGCCAGTCTAATGCTGTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTATTTCTATACATTCTaGAAGTGTCGGCATTCATCA +
Preference number: 4 (lower is better)
Translates to: CRQSNAVNGLLGLRGKPPYFYTF*KCRHSS
Trigger: TGATGAATGCCGACACTTCCAGAATGTATAGAAATA...GGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGACAGCATTAGACTGGCGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp TCATCAAACAATGAACACCACGAAGTCTGTCCATGCTCTCCACAAGCACACTGGTGCTGTGGAGTCCCTTaGCCAAACTTGAGTGCACTG +
Preference number: 4 (lower is better)
Translates to: SSNNEHHEVCPCSPQAHWCCGVP*PNLSAL
Trigger: CAGTGCACTCAAGTTTGGCCAAGGGACTCCACAGCA...CCAGTGTGCTTGTGGAGAGCATGGACAGACTTCGTGGTGTTCATTGTTTGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp AAATACAGACAGGGTCAGTGGCAGGCCAGGACAGGGACTATTTCTATACATTCTAGGCATGCAGTCTTCTaGGTGCTGTGGAGTCCCTTG +
Preference number: 4 (lower is better)
Translates to: KYRQGQWQARTGTISIHSRHAVF*VLWSPL
Trigger: CAAGGGACTCCACAGCACCCAGAAGACTGCATGCCT...AGAATGTATAGAAATAGTCCCTGTCCTGGCCTGCCACTGACCCTGTCTGTATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp GCTCTGGGCATTCCCACGAAGCATCCACGACAAAAGAAGCTGAAGGCGTCACGGTTGAACATCACAGGCTaGTTTTATTTGGGACAGAAC +
Preference number: 4 (lower is better)
Translates to: ALGIPTKHPRQKKLKASRLNITG*FYLGQN
Trigger: GTTCTGTCCCAAATAAAACCAGCCTGTGATGTTCAA...CCGTGACGCCTTCAGCTTCTTTTGTCGTGGATGCTTCGTGGGAATGCCCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR TCA 90 bp CTGGAAATGCATTCAAAATTAAAGTTGGGCCCTAGTCAGGGTTACTTTGTATTTCCAGCAAGTCCTGCATaGCCTCCGGGCGCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: LEMHSKLKLGPSQGYFVFPASPA*PPGAAC
Trigger: GCAAGCTGCGCCCGGAGGTCATGCAGGACTTGCTGG...AAATACAAAGTAACCCTGACTAGGGCCCAACTTTAATTTTGAATGCATTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR TCA 90 bp CCCCTTGAAGCTTGCAATAGAATCACAGGACTGGATGGGTTTCCCTTCTTTTGCGCATCTCTGCCTTGCTaGTATAGCCATTTCCGTCCA +
Preference number: 4 (lower is better)
Translates to: PLEACNRITGLDGFPFFCASLPC*YSHFRP
Trigger: TGGACGGAAATGGCTATATCAGCAAGGCAGAGATGC...GCAAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTATTGCAAGCTTCAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR TCA 90 bp GAAGCTTGCAATAGAATCACAGGACTGGATGGGTTTCCCTTCTTTTGCCCCAACGCATCTCTGCCTTGCTaGTATAGCCATTTCCGTCCA +
Preference number: 4 (lower is better)
Translates to: EACNRITGLDGFPFFCPNASLPC*YSHFRP
Trigger: TGGACGGAAATGGCTATATCAGCAAGGCAGAGATGC...GTTGGGGCAAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTATTGCAAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR TCA 90 bp GGAAATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGTCTTTTCTCTGGGGTTaGCTCATCTTCAGGCATTTT +
Preference number: 4 (lower is better)
Translates to: GNVPARWNSLTPEGNLFLSFLWG*LIFRHF
Trigger: AAAATGCCTGAAGATGAGTCAACCCCAGAGAAAAGA...CAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR TCA 90 bp AGTGACATAAACCTTGAGGCATGCAGTCTTCTGGGTGCTGTGGAGTCCCTTGGCTCTTTTCTCTGGGGTTaGCTCATCTTCAGGCATTTT +
Preference number: 4 (lower is better)
Translates to: SDINLEACSLLGAVESLGSFLWG*LIFRHF
Trigger: AAAATGCCTGAAGATGAGTCAACCCCAGAGAAAAGA...GCCAAGGGACTCCACAGCACCCAGAAGACTGCATGCCTCAAGGTTTATGTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR TCA 90 bp ATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGAAAAATCATCAAACAATaGACACCACGAAGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: MSQLAGIASPQRVTCSWGKIIKQ*TPRSLS
Trigger: GGACAGACTTCGTGGTGTTCATTGTTTGATGATTTT...TCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR TCA 90 bp GGAAATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGTGCAAAGACAGATATaGCTTCCAAACAAGACAGAC +
Preference number: 4 (lower is better)
Translates to: GNVPARWNSLTPEGNLFLVQRQI*LPNKTD
Trigger: GTCTGTCTTGTTTGGAAGTCATATCTGTCTTTGCAC...CAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR TCA 90 bp AGTGACATAAACCTTGAGGCATGCAGTCTTCTGGGTGCTGTGGAGTCCCTTGGCCCAGGAGACCAAAGTTaGGATAATCTAGTGGTAGAT +
Preference number: 4 (lower is better)
Translates to: SDINLEACSLLGAVESLGPGDQS*DNLVVD
Trigger: ATCTACCACTAGATTATCTCAACTTTGGTCTCCTGG...GCCAAGGGACTCCACAGCACCCAGAAGACTGCATGCCTCAAGGTTTATGTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311028.4
ENST00000395923.5
CDS-3UTR TCA 90 bp ATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGAGGAGTGATATTTCTTTaGAGGAATCAGGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: MSQLAGIASPQRVTCSWGGVIFL*RNQEGL
Trigger: AAGTCCTTCCTGATTCCTTCAAAGAAATATCACTCC...TCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521599.5
CDS-3UTR GCA 90 bp GAAGCTTGCAATAGAATCACAGGACTGGATGGGTTTCCCTTCTTTTGCCCCAACGCGGAAGACATGCTCTaGAAATTTGGAAGCATCCCC +
Preference number: 4 (lower is better)
Translates to: EACNRITGLDGFPFFCPNAEDML*KFGSIP
Trigger: GGGGATGCTTCCAAATTTGCAGAGCATGTCTTCCGC...GTTGGGGCAAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTATTGCAAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR GCA 90 bp GAAGCTTGCAATAGAATCACAGGACTGGATGGGTTTCCCTTCTTTTGCCCCAACTGTCCCATCTCCATTTaGATCGAAGGTGCGGAAGAC +
Preference number: 4 (lower is better)
Translates to: EACNRITGLDGFPFFCPNCPISI*IEGAED
Trigger: GTCTTCCGCACCTTCGATGCAAATGGAGATGGGACA...GTTGGGGCAAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTATTGCAAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR GCA 90 bp TGTCGATTGGTACATTTGTGCAAAGACAGATATGACTTCCAAACAAGACAGACACTGCTCGGGTCGCACTaGAGGAGGCGCACAATGGAC +
Preference number: 4 (lower is better)
Translates to: CRLVHLCKDRYDFQTRQTLLGSH*RRRTMD
Trigger: GTCCATTGTGCGCCTCCTGCAGTGCGACCCGAGCAG...TGTCTGTCTTGTTTGGAAGTCATATCTGTCTTTGCACAAATGTACCAATCGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR GCA 90 bp TCTGCATTCAAAGAGCACGGCAATGGAAAATACTTTTGGATTCTCCATAGGGGGCACTACCACCTGCTCTaGATCTGCCCTCTAGGCATG +
Preference number: 4 (lower is better)
Translates to: SAFKEHGNGKYFWILHRGHYHLL*ICPLGM
Trigger: CATGCCTAGAGGGCAGATGCAGAGCAGGTGGTAGTG...CCCCCTATGGAGAATCCAAAAGTATTTTCCATTGCCGTGCTCTTTGAATGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp CCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGTTTTGTCTTTCAAACAACTCAGAAAAGCACCATaGCGCCAGTCTAATGCTGTC +
Preference number: 4 (lower is better)
Translates to: PYGTCDNRFRWGVLSFKQLRKAP*RQSNAV
Trigger: GACAGCATTAGACTGGCGGCATGGTGCTTTTCTGAG...TTGTTTGAAAGACAAAACTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR GCA 90 bp GTCACGGAGGAAGGCGCATCAGACCGCACAGGGGACGGCATCACCATTGATATTACAAATTTGGATTTCTaGTGCCAATTACAGCAGACT +
Preference number: 4 (lower is better)
Translates to: VTEEGASDRTGDGITIDITNLDF*CQLQQT
Trigger: AGTCTGCTGTAATTGGCAGCAGAAATCCAAATTTGT...AATATCAATGGTGATGCCGTCCCCTGTGCGGTCTGATGCGCCTTCCTCCGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp GCTGTCACTTCTGGAAATAGAAGTCTGCATTCAAAGAGCACGGCAATGGAAAATTCTCCACAAGCACACTaGGGCTCTGGGCATTCCCAC +
Preference number: 4 (lower is better)
Translates to: AVTSGNRSLHSKSTAMENSPQAH*GSGHSH
Trigger: GTGGGAATGCCCAGAGCCCCAGTGTGCTTGTGGAGA...ATTTTCCATTGCCGTGCTCTTTGAATGCAGACTTCTATTTCCAGAAGTGACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp GCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGAATCCAGCATCCGATAGAATCACAGGACTaGATGGGTTTCCCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: AGIASPQRVTCSWGIQHPIESQD*MGFPSF
Trigger: AAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTAT...CGGATGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp GCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGAATCCAGCATCCGGACAACAGATTCAGGTaGGGAGTTTTGTCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: AGIASPQRVTCSWGIQHPDNRFR*GVLSFK
Trigger: TTTGAAAGACAAAACTCCCCACCTGAATCTGTTGTC...CGGATGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp GGCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTCTTGGGAGTGGGCCCCCATaGGGAAATGTCCCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: GKTLNLVCITQYVIYSRLGSGPP*GNVPAR
Trigger: GCGAGCTGGGACATTTCCCCATGGGGGCCCACTCCC...AAGACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp TTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTAGATGGGTCTGGTTTTaGAATATGTTACCATTTGTG +
Preference number: 4 (lower is better)
Translates to: LFLGNPASGAIHHPYGTCRWVWF*NMLPFV
Trigger: CACAAATGGTAACATATTCCAAAACCAGACCCATCT...ACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp GTCACGGAGGAAGGCGCATCAGACCGCACAGGGGACGGCATCACCATTGATATTCAGGCTGGTTTTATTTaGGACAGAACAGGTTTTATT +
Preference number: 4 (lower is better)
Translates to: VTEEGASDRTGDGITIDIQAGFI*DRTGFI
Trigger: AATAAAACCTGTTCTGTCCCAAATAAAACCAGCCTG...AATATCAATGGTGATGCCGTCCCCTGTGCGGTCTGATGCGCCTTCCTCCGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp GAGGGAAACCACCCTACTGGTCCCCTGTCATACATGTTAACATTCCTGTGCTCCAGTTCAAGGGAGCCTTaGAAGGCAGTTGAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: EGNHPTGPLSYMLTFLCSSSREP*KAVEKL
Trigger: AAGCTTTTCAACTGCCTTCCAAGGCTCCCTTGAACT...GGAGCACAGGAATGTTAACATGTATGACAGGGGACCAGTAGGGTGGTTTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395923.5
CDS-3UTR TCA 90 bp GGAAATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGAAAATCATCAAACAATaGACACCACGAAGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: GNVPARWNSLTPEGNLFLKIIKQ*TPRSLS
Trigger: GGACAGACTTCGTGGTGTTCATTGTTTGATGATTTT...CAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACATTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR TCA 90 bp TGTCGATTGGTACATTTGTGCAAAGACAGATATGACTTCCAAACAAGACAGACACCCCTACGGCACGTGTaGCAACAGATTCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: CRLVHLCKDRYDFQTRQTPLRHV*QQIQVG
Trigger: CCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGG...TGTCTGTCTTGTTTGGAAGTCATATCTGTCTTTGCACAAATGTACCAATCGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR TCA 90 bp CCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGTTTTGTCTTTCAAACAACTACTTGCAAGAGTATaGCTCGCCTGTAACCAGCAA +
Preference number: 4 (lower is better)
Translates to: PYGTCDNRFRWGVLSFKQLLARV*LACNQQ
Trigger: TTGCTGGTTACAGGCGAGTCATACTCTTGCAAGTAG...TTGTTTGAAAGACAAAACTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp GACAGGGACTATTTCTATACATTCTGGAAGTGTCGGCATTCATCAGCCTGCATGTGTCCCATCTCCATTTaGATCGAAGGTGCGGAAGAC +
Preference number: 4 (lower is better)
Translates to: DRDYFYTFWKCRHSSACMCPISI*IEGAED
Trigger: GTCTTCCGCACCTTCGATGCAAATGGAGATGGGACA...CATGCAGGCTGATGAATGCCGACACTTCCAGAATGTATAGAAATAGTCCCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp TCTGCATTCAAAGAGCACGGCAATGGAAAATACTTTTGGATTCTCCATAGGGGGCACGAAGTCTGTCCATaGTCTCCACAAGCACACTGG +
Preference number: 4 (lower is better)
Translates to: SAFKEHGNGKYFWILHRGHEVCP*SPQAHW
Trigger: CCAGTGTGCTTGTGGAGAGCATGGACAGACTTCGTG...CCCCCTATGGAGAATCCAAAAGTATTTTCCATTGCCGTGCTCTTTGAATGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp GTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGTTTCGATTGGTACATTTGTaGAAAGACAGATATGACTTC +
Preference number: 4 (lower is better)
Translates to: VPSITPTARVTTDSGGEFRLVHL*KDRYDF
Trigger: GAAGTCATATCTGTCTTTGCACAAATGTACCAATCG...AAACTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR GCA 90 bp GAGGGAAACCACCCTACTGGTCCCCTGTCATACATGTTAACATTCCTGTGCTCCCTGGAAATAGAAGTCTaGATTCAAAGAGCACGGCAA +
Preference number: 4 (lower is better)
Translates to: EGNHPTGPLSYMLTFLCSLEIEV*IQRARQ
Trigger: TTGCCGTGCTCTTTGAATGCAGACTTCTATTTCCAG...GGAGCACAGGAATGTTAACATGTATGACAGGGGACCAGTAGGGTGGTTTCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp ACGATTAAAAATCATCAAACAATGAACACCACGAAGTCTGTCCATGCTCTCCACAGCACACTGGGGCTCTaGGCATTCCCACGAAGCATC +
Preference number: 4 (lower is better)
Translates to: TIKNHQTMNTTKSVHALHSTLGL*AFPRSI
Trigger: GATGCTTCGTGGGAATGCCCAGAGCCCCAGTGTGCT...GTGGAGAGCATGGACAGACTTCGTGGTGTTCATTGTTTGATGATTTTTAATCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp GAAGCTTGCAATAGAATCACAGGACTGGATGGGTTTCCCTTCTTTTGCCCCAACAATCACAGGACTGGATaGGTTTCCCTTCTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: EACNRITGLDGFPFFCPNNHRTG*VSLLLP
Trigger: GGGCAAAAGAAGGGAAACCCATCCAGTCCTGTGATT...GTTGGGGCAAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTATTGCAAGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp GTCACGGAGGAAGGCGCATCAGACCGCACAGGGGACGGCATCACCATTGATATTGCAAAACACTTAATTTaGTCTGCATTACCCAATATG +
Preference number: 4 (lower is better)
Translates to: VTEEGASDRTGDGITIDIAKHLI*SALPNM
Trigger: CATATTGGGTAATGCAGACCAAATTAAGTGTTTTGC...AATATCAATGGTGATGCCGTCCCCTGTGCGGTCTGATGCGCCTTCCTCCGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp GCTCTGGGCATTCCCACGAAGCATCCACGACAAAAGAAGCTGAAGGCGTCACGGTCTACCATACAAATTTaGATTTCTGCTGCCAATTAC +
Preference number: 4 (lower is better)
Translates to: ALGIPTKHPRQKKLKASRSTIQI*ISAANY
Trigger: GTAATTGGCAGCAGAAATCCAAATTTGTATGGTAGA...CCGTGACGCCTTCAGCTTCTTTTGTCGTGGATGCTTCGTGGGAATGCCCAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp GGGCCTCCCTTTGCTAACTACTTGCAAGAGTATGACTCGCCTGTAACCAGCAAAGGCCATGGAGGAATTTaGCAAGTTTTGGTACAGAAC +
Preference number: 4 (lower is better)
Translates to: GPPFANYLQEYDSPVTSKGHGGI*QVLVQN
Trigger: GTTCTGTACCAAAACTTGCCAAATTCCTCCATGGCC...TTTGCTGGTTACAGGCGAGTCATACTCTTGCAAGTAGTTAGCAAAGGGAGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR TCA 90 bp TCATCAAACAATGAACACCACGAAGTCTGTCCATGCTCTCCACAAGCACACTGGCTTAAACTCTTCCATTaGCAAATGTCCACTGGGGCA +
Preference number: 4 (lower is better)
Translates to: SSNNEHHEVCPCSPQAHWLKLFH*QMSTGA
Trigger: TGCCCCAGTGGACATTTGTCAATGGAAGAGTTTAAG...CCAGTGTGCTTGTGGAGAGCATGGACAGACTTCGTGGTGTTCATTGTTTGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR TCA 90 bp CTGGAAATGCATTCAAAATTAAAGTTGGGCCCTAGTCAGGGTTACTTTGTATTTCCCCTACGGCACGTGTaGCAACAGATTCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LEMHSKLKLGPSQGYFVFPLRHV*QQIQVG
Trigger: CCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGG...AAATACAAAGTAACCCTGACTAGGGCCCAACTTTAATTTTGAATGCATTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR TCA 90 bp CAAGGCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTATGGGCTGCTGGGCCTaGGAGGGAAACCACCCTACT +
Preference number: 4 (lower is better)
Translates to: QGKTLNLVCITQYVIYSRMGCWA*EGNHPT
Trigger: AGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCAT...ACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR TCA 90 bp TGTCGATTGGTACATTTGTGCAAAGACAGATATGACTTCCAAACAAGACAGACACTCAGCGAGATGTCATaGCTAAGGGCAGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: CRLVHLCKDRYDFQTRQTLSEMS*LRAEPR
Trigger: CCTGGGCTCTGCCCTTAGTCATGACATCTCGCTGAG...TGTCTGTCTTGTTTGGAAGTCATATCTGTCTTTGCACAAATGTACCAATCGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp TGTCGATTGGTACATTTGTGCAAAGACAGATATGACTTCCAAACAAGACAGACAGAATCCAGCATCCGGTaGCATCCATCACCCCTACGG +
Preference number: 4 (lower is better)
Translates to: CRLVHLCKDRYDFQTRQTESSIR*HPSPLR
Trigger: CCGTAGGGGTGATGGATGGCACCGGATGCTGGATTC...TGTCTGTCTTGTTTGGAAGTCATATCTGTCTTTGCACAAATGTACCAATCGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR GCA 90 bp AGGTTTCTCAAAACATTAACTGATTCCACCTACCAAAGGAGAATCAAAGGAAGGCACCTGCTCTGCATCTaGCCTCTAGGCATGGCCACT +
Preference number: 4 (lower is better)
Translates to: RFLKTLTDSTYQRRIKGRHLLCI*PLGMAT
Trigger: AGTGGCCATGCCTAGAGGGCAGATGCAGAGCAGGTG...CCTTCCTTTGATTCTCCTTTGGTAGGTGGAATCAGTTAATGTTTTGAGAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp GGAAATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGATGAATTTGATGACTaGCCAACCTCTGATTCTTTA +
Preference number: 4 (lower is better)
Translates to: GNVPARWNSLTPEGNLFLDEFDD*PTSDSL
Trigger: TAAAGAATCAGAGGTTGGGCAGTCATCAAATTCATC...CAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACATTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000521599.5
CDS-3UTR GCA 90 bp AAATACAGACAGGGTCAGTGGCAGGCCAGGACAGGGACTATTTCTATACATTCTATAAACCTTGAGGCATaGAGTCTTCTGGGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: KYRQGQWQARTGTISIHSINLEA*SLLGAV
Trigger: CACAGCACCCAGAAGACTGCATGCCTCAAGGTTTAT...AGAATGTATAGAAATAGTCCCTGTCCTGGCCTGCCACTGACCCTGTCTGTATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp GAGGGAAACCACCCTACTGGTCCCCTGTCATACATGTTAACATTCCTGTGCTCCCCTTTATACCATTCCTaGATCTCATGCTCTGTAAAG +
Preference number: 4 (lower is better)
Translates to: EGNHPTGPLSYMLTFLCSPLYHS*ISCSVK
Trigger: CTTTACAGAGCATGAGATCCAGGAATGGTATAAAGG...GGAGCACAGGAATGTTAACATGTATGACAGGGGACCAGTAGGGTGGTTTCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp GGAAATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGAGATGGGTCTGGTTTTaGAATATGTTACCATTTGTG +
Preference number: 4 (lower is better)
Translates to: GNVPARWNSLTPEGNLFLRWVWF*NMLPFV
Trigger: CACAAATGGTAACATATTCCAAAACCAGACCCATCT...CAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACATTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp TTCTGGGTGCTGTGGAGTCCCTTGGCCAAACTTGAGTGCACTGGATTCGACATAGCAACAAGATGGGTCTaGTTTTGGAATATGTTACCA +
Preference number: 4 (lower is better)
Translates to: FWVLWSPLAKLECTGFDIATRWV*FWNMLP
Trigger: TGGTAACATATTCCAAAACCAGACCCATCTTGTTGC...TATGTCGAATCCAGTGCACTCAAGTTTGGCCAAGGGACTCCACAGCACCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp ATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGAGCAAAACACTTAATTTaGTCTGCATTACCCAATATG +
Preference number: 4 (lower is better)
Translates to: MSQLAGIASPQRVTCSWGAKHLI*SALPNM
Trigger: CATATTGGGTAATGCAGACCAAATTAAGTGTTTTGC...TCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp GAAGCTTGCAATAGAATCACAGGACTGGATGGGTTTCCCTTCTTTTGCCCCAACCTTTGGCAAGTGGCTTaGCAGCAAATATACCCACTA +
Preference number: 4 (lower is better)
Translates to: EACNRITGLDGFPFFCPNLWQVA*QQIYPL
Trigger: TAGTGGGTATATTTGCTGCCAAGCCACTTGCCAAAG...GTTGGGGCAAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTATTGCAAGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp CCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGTTTTGTCTTTCAAACAAGGCCATGGAGGAATTTaGCAAGTTTTGGTACAGAAC +
Preference number: 4 (lower is better)
Translates to: PYGTCDNRFRWGVLSFKQGHGGI*QVLVQN
Trigger: GTTCTGTACCAAAACTTGCCAAATTCCTCCATGGCC...TTGTTTGAAAGACAAAACTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp TTCTGGGTGCTGTGGAGTCCCTTGGCCAAACTTGAGTGCACTGGATTCGACATAACAGATTTTAACACTTaGCCATGGAGGAATTTGGCA +
Preference number: 4 (lower is better)
Translates to: FWVLWSPLAKLECTGFDITDFNT*PWRNLA
Trigger: TGCCAAATTCCTCCATGGCCAAGTGTTAAAATCTGT...TATGTCGAATCCAGTGCACTCAAGTTTGGCCAAGGGACTCCACAGCACCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp CCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGTTTTGTCTTTCAAACAATTATTAAATCCACCGTaGGCATACAGATGGGATGGG +
Preference number: 4 (lower is better)
Translates to: PYGTCDNRFRWGVLSFKQLLNPP*AYRWDG
Trigger: CCCATCCCATCTGTATGCCCACGGTGGATTTAATAA...TTGTTTGAAAGACAAAACTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp GACAGGGACTATTTCTATACATTCTGGAAGTGTCGGCATTCATCAGCCTGCATGGAAAAGCTTCTCAGGTaGTGTCCTCTGGACTCTTCA +
Preference number: 4 (lower is better)
Translates to: DRDYFYTFWKCRHSSACMEKLLR*CPLDSS
Trigger: TGAAGAGTCCAGAGGACACCACCTGAGAAGCTTTTC...CATGCAGGCTGATGAATGCCGACACTTCCAGAATGTATAGAAATAGTCCCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395923.5
CDS-3UTR TCA 90 bp CCCCTTGAAGCTTGCAATAGAATCACAGGACTGGATGGGTTTCCCTTCTTTTGCGTGCAAAGACAGATATaGCTTCCAAACAAGACAGAC +
Preference number: 4 (lower is better)
Translates to: PLEACNRITGLDGFPFFCVQRQI*LPNKTD
Trigger: GTCTGTCTTGTTTGGAAGTCATATCTGTCTTTGCAC...GCAAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTATTGCAAGCTTCAAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR TCA 90 bp TCATCAAACAATGAACACCACGAAGTCTGTCCATGCTCTCCACAAGCACACTGGGTGCAAAGACAGATATaGCTTCCAAACAAGACAGAC +
Preference number: 4 (lower is better)
Translates to: SSNNEHHEVCPCSPQAHWVQRQI*LPNKTD
Trigger: GTCTGTCTTGTTTGGAAGTCATATCTGTCTTTGCAC...CCAGTGTGCTTGTGGAGAGCATGGACAGACTTCGTGGTGTTCATTGTTTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR TCA 90 bp TCATCAAACAATGAACACCACGAAGTCTGTCCATGCTCTCCACAAGCACACTGGTTTATTCCAGTCCCTTaGACATCACAGGCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: SSNNEHHEVCPCSPQAHWFIPVP*TSQAGF
Trigger: AAAACCAGCCTGTGATGTTCAAGGGACTGGAATAAA...CCAGTGTGCTTGTGGAGAGCATGGACAGACTTCGTGGTGTTCATTGTTTGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR TCA 90 bp GGCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTCTTCCTGCTCTACCGCAGTaGAGTTCAAGGGAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: GKTLNLVCITQYVIYSRLPALPQ*SSREPW
Trigger: CCAAGGCTCCCTTGAACTTCACTGCGGTAGAGCAGG...AAGACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395923.5
CDS-3UTR GCA 90 bp TATACAGCCGTCTTTTTATTTTATCACAATAGGCAACAAGATGGGTCTGGTTTTCTTTCCAGCAAGTCCTaGATGACCTCCGGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: YTAVFLFYHNRQQDGSGFLSSKS*MTSGRS
Trigger: GCTGCGCCCGGAGGTCATGCAGGACTTGCTGGAAAG...AAAACCAGACCCATCTTGTTGCCTATTGTGATAAAATAAAAAGACGGCTGTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR GCA 90 bp CTGGAAATGCATTCAAAATTAAAGTTGGGCCCTAGTCAGGGTTACTTTGTATTTCACCTGCTCTGCATCTaGCCTCTAGGCATGGCCACT +
Preference number: 4 (lower is better)
Translates to: LEMHSKLKLGPSQGYFVFHLLCI*PLGMAT
Trigger: AGTGGCCATGCCTAGAGGGCAGATGCAGAGCAGGTG...AAATACAAAGTAACCCTGACTAGGGCCCAACTTTAATTTTGAATGCATTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR GCA 90 bp TCATCAAACAATGAACACCACGAAGTCTGTCCATGCTCTCCACAAGCACACTGGATGTTAACATTCCTGTaGTCCAATTGTCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: SSNNEHHEVCPCSPQAHWMLTFL*SNCPVP
Trigger: TGGGACAGGACAATTGGAGCACAGGAATGTTAACAT...CCAGTGTGCTTGTGGAGAGCATGGACAGACTTCGTGGTGTTCATTGTTTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR GCA 90 bp CAAGGCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTCTAGCCAGCCTGCACTaGTACTTTCCAAGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: QGKTLNLVCITQYVIYSRLASLH*YFPRGA
Trigger: GGCACCCCTTGGAAAGTAGCAGTGCAGGCTGGCTAG...ACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395923.5
CDS-3UTR CCA 90 bp CAAGGCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTTCTCCACAAGCACACTaGGGCTCTGGGCATTCCCAC +
Preference number: 4 (lower is better)
Translates to: QGKTLNLVCITQYVIYSRSPQAH*GSGHSH
Trigger: GTGGGAATGCCCAGAGCCCCAGTGTGCTTGTGGAGA...ACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp GGCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTCTTTCTCCACAAGCACACTaGGGCTCTGGGCATTCCCAC +
Preference number: 4 (lower is better)
Translates to: GKTLNLVCITQYVIYSRLSPQAH*GSGHSH
Trigger: GTGGGAATGCCCAGAGCCCCAGTGTGCTTGTGGAGA...AAGACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp GGGCCTCCCTTTGCTAACTACTTGCAAGAGTATGACTCGCCTGTAACCAGCAAAATAGAATCACAGGACTaGATGGGTTTCCCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: GPPFANYLQEYDSPVTSKIESQD*MGFPSF
Trigger: AAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTAT...TTTGCTGGTTACAGGCGAGTCATACTCTTGCAAGTAGTTAGCAAAGGGAGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp GAGGGAAACCACCCTACTGGTCCCCTGTCATACATGTTAACATTCCTGTGCTCCAGATGGGTCTGGTTTTaGAATATGTTACCATTTGTG +
Preference number: 4 (lower is better)
Translates to: EGNHPTGPLSYMLTFLCSRWVWF*NMLPFV
Trigger: CACAAATGGTAACATATTCCAAAACCAGACCCATCT...GGAGCACAGGAATGTTAACATGTATGACAGGGGACCAGTAGGGTGGTTTCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp CCCCTTGAAGCTTGCAATAGAATCACAGGACTGGATGGGTTTCCCTTCTTTTGCGAATTTGGCAAGTTTTaGTACAGAACCACTGTGAGG +
Preference number: 4 (lower is better)
Translates to: PLEACNRITGLDGFPFFCEFGKF*YRTTVR
Trigger: CCTCACAGTGGTTCTGTACCAAAACTTGCCAAATTC...GCAAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTATTGCAAGCTTCAAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp GACAGGGACTATTTCTATACATTCTGGAAGTGTCGGCATTCATCAGCCTGCATGGCTCACTTTTCTTTCTaGAATAGCCGGAGACCTCTA +
Preference number: 4 (lower is better)
Translates to: DRDYFYTFWKCRHSSACMAHFSF*NSRRPL
Trigger: TAGAGGTCTCCGGCTATTCCAGAAAGAAAAGTGAGC...CATGCAGGCTGATGAATGCCGACACTTCCAGAATGTATAGAAATAGTCCCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR CAA 72 bp CTTAGTGGCAAGTTCCCCATCAACAACCTTGAGAATTaGGGCCTCCCTTTGCTAACTACTTGCAAGAGTATG +
Preference number: 4 (lower is better)
Translates to: LSGKFPINNLEN*GLPLLTTCKSM
Trigger: CATACTCTTGCAAGTAGTTAGCAAAGGGAGGCCCAAATTCTCAAGGTTGTTGATGGGGAACTTGCCACTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR CAA 72 bp ATTTTAACACTTGGCCATGGAGGAATTTGGCAAGTTTaGGTACAGAACCACTGTGAGGAACTGACCCCTGGA +
Preference number: 4 (lower is better)
Translates to: ILTLGHGGIWQV*VQNHCEELTPG
Trigger: TCCAGGGGTCAGTTCCTCACAGTGGTTCTGTACCAAAACTTGCCAAATTCCTCCATGGCCAAGTGTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR TCA 90 bp GCTGTCACTTCTGGAAATAGAAGTCTGCATTCAAAGAGCACGGCAATGGAAAATGAGTCTGCAGAGTATTaGTCTGCTCAGAAAAGCACC +
Preference number: 4 (lower is better)
Translates to: AVTSGNRSLHSKSTAMENESAEY*SAQKST
Trigger: GGTGCTTTTCTGAGCAGATCAATACTCTGCAGACTC...ATTTTCCATTGCCGTGCTCTTTGAATGCAGACTTCTATTTCCAGAAGTGACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR TCA 90 bp ACGATTAAAAATCATCAAACAATGAACACCACGAAGTCTGTCCATGCTCTCCACTCCCTTGGCCAAACTTaGGTGCACTGGATTCGACAT +
Preference number: 4 (lower is better)
Translates to: TIKNHQTMNTTKSVHALHSLGQT*VHWIRH
Trigger: ATGTCGAATCCAGTGCACTCAAGTTTGGCCAAGGGA...GTGGAGAGCATGGACAGACTTCGTGGTGTTCATTGTTTGATGATTTTTAATCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR TCA 90 bp AAATACAGACAGGGTCAGTGGCAGGCCAGGACAGGGACTATTTCTATACATTCTCCAGGAGACCAAAGTTaGGATAATCTAGTGGTAGAT +
Preference number: 4 (lower is better)
Translates to: KYRQGQWQARTGTISIHSPGDQS*DNLVVD
Trigger: ATCTACCACTAGATTATCTCAACTTTGGTCTCCTGG...AGAATGTATAGAAATAGTCCCTGTCCTGGCCTGCCACTGACCCTGTCTGTATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp GACAGGGACTATTTCTATACATTCTGGAAGTGTCGGCATTCATCAGCCTGCATGCATTCCTGGATCTCATaGTCTGTAAAGTCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: DRDYFYTFWKCRHSSACMHSWIS*SVKSVL
Trigger: AAGCACAGACTTTACAGAGCATGAGATCCAGGAATG...CATGCAGGCTGATGAATGCCGACACTTCCAGAATGTATAGAAATAGTCCCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp TCTGCATTCAAAGAGCACGGCAATGGAAAATACTTTTGGATTCTCCATAGGGGGAAGCCCCTTGAAGCTTaGAATAGAATCACAGGACTG +
Preference number: 4 (lower is better)
Translates to: SAFKEHGNGKYFWILHRGKPLEA*NRITGL
Trigger: CAGTCCTGTGATTCTATTGCAAGCTTCAAGGGGCTT...CCCCCTATGGAGAATCCAAAAGTATTTTCCATTGCCGTGCTCTTTGAATGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp CCCCTTGAAGCTTGCAATAGAATCACAGGACTGGATGGGTTTCCCTTCTTTTGCAACCACAGACACACTTaGCCATGTCTTTATGATGAA +
Preference number: 4 (lower is better)
Translates to: PLEACNRITGLDGFPFFCNHRHT*PCLYDE
Trigger: TTCATCATAAAGACATGGGCAAGTGTGTCTGTGGTT...GCAAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTATTGCAAGCTTCAAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000521599.5
CDS-3UTR CCA 90 bp TGTCGATTGGTACATTTGTGCAAAGACAGATATGACTTCCAAACAAGACAGACAGCTCTACAATTCGATTaGTGGGCGCAGGGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: CRLVHLCKDRYDFQTRQTALQFD*WAQGSE
Trigger: TTCTGAGCCCTGCGCCCACCAATCGAATTGTAGAGC...TGTCTGTCTTGTTTGGAAGTCATATCTGTCTTTGCACAAATGTACCAATCGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp GAAGCTTGCAATAGAATCACAGGACTGGATGGGTTTCCCTTCTTTTGCCCCAACATAGAATCACAGGACTaGATGGGTTTCCCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: EACNRITGLDGFPFFCPNIESQD*MGFPSF
Trigger: AAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTAT...GTTGGGGCAAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTATTGCAAGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp GAAGCTTGCAATAGAATCACAGGACTGGATGGGTTTCCCTTCTTTTGCCCCAACGCAACAAGATGGGTCTaGTTTTGGAATATGTTACCA +
Preference number: 4 (lower is better)
Translates to: EACNRITGLDGFPFFCPNATRWV*FWNMLP
Trigger: TGGTAACATATTCCAAAACCAGACCCATCTTGTTGC...GTTGGGGCAAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTATTGCAAGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp CCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGTTTTGTCTTTCAAACAAGCAACAAGATGGGTCTaGTTTTGGAATATGTTACCA +
Preference number: 4 (lower is better)
Translates to: PYGTCDNRFRWGVLSFKQATRWV*FWNMLP
Trigger: TGGTAACATATTCCAAAACCAGACCCATCTTGTTGC...TTGTTTGAAAGACAAAACTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp TCTGCATTCAAAGAGCACGGCAATGGAAAATACTTTTGGATTCTCCATAGGGGGGCTCACTTTTCTTTCTaGAATAGCCGGAGACCTCTA +
Preference number: 4 (lower is better)
Translates to: SAFKEHGNGKYFWILHRGAHFSF*NSRRPL
Trigger: TAGAGGTCTCCGGCTATTCCAGAAAGAAAAGTGAGC...CCCCCTATGGAGAATCCAAAAGTATTTTCCATTGCCGTGCTCTTTGAATGCAGA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp TGTCGATTGGTACATTTGTGCAAAGACAGATATGACTTCCAAACAAGACAGACAGTCTTCTGGGTGCTGTaGAGTCCCTTGGCCAAACTT +
Preference number: 4 (lower is better)
Translates to: CRLVHLCKDRYDFQTRQTVFWVL*SPLAKL
Trigger: AAGTTTGGCCAAGGGACTCCACAGCACCCAGAAGAC...TGTCTGTCTTGTTTGGAAGTCATATCTGTCTTTGCACAAATGTACCAATCGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR CAA 72 bp AATCCTTCAGGTCGTAAGCCACTTTATTCCAGTCCCTaGAACATCACAGGCTGGTTTTATTTGGGACAGAAC +
Preference number: 4 (lower is better)
Translates to: NPSGRKPLYSSP*NITGWFYLGQN
Trigger: GTTCTGTCCCAAATAAAACCAGCCTGTGATGTTCAAGGGACTGGAATAAAGTGGCTTACGACCTGAAGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR TCA 90 bp AACTACTTGCAAGAGTATGACTCGCCTGTAACCAGCAAATTTTTACTCTTAGCTTTTTGGCTCCTCGGATaGACTCTTCCAGGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: NYLQEYDSPVTSKFLLLAFWLLG*TLPGRV
Trigger: AACTCTCCCTGGAAGAGTTCATCCGAGGAGCCAAAA...AGCTAAGAGTAAAAATTTGCTGGTTACAGGCGAGTCATACTCTTGCAAGTAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR TCA 90 bp TGTCGATTGGTACATTTGTGCAAAGACAGATATGACTTCCAAACAAGACAGACATTTTGGCTCCTCGGATaGACTCTTCCAGGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: CRLVHLCKDRYDFQTRQTFWLLG*TLPGRV
Trigger: AACTCTCCCTGGAAGAGTTCATCCGAGGAGCCAAAA...TGTCTGTCTTGTTTGGAAGTCATATCTGTCTTTGCACAAATGTACCAATCGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR TCA 90 bp GCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTCTTTCACGACAAAAGAAGCTaGAGGCGTCACGGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: AKHLIWSALPNMLYTAVFHDKRS*RRHGGR
Trigger: CCTTCCTCCGTGACGCCTTCAGCTTCTTTTGTCGTG...AAAGACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR TCA 90 bp TATACAGCCGTCTTTTTATTTTATCACAATAGGCAACAAGATGGGTCTGGTTTTCAGGGGCAGGGAAACTaGATATTCCAGACCTGGCTC +
Preference number: 4 (lower is better)
Translates to: YTAVFLFYHNRQQDGSGFQGQGN*IFQTWL
Trigger: GAGCCAGGTCTGGAATATTCAGTTTCCCTGCCCCTG...AAAACCAGACCCATCTTGTTGCCTATTGTGATAAAATAAAAAGACGGCTGTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000521599.5
CDS-3UTR TCA 90 bp AGGTTTCTCAAAACATTAACTGATTCCACCTACCAAAGGAGAATCAAAGGAAGGCCCCATCAACAACCTTaGGAATTTGGGCCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: RFLKTLTDSTYQRRIKGRPHQQP*EFGPPF
Trigger: AAAGGGAGGCCCAAATTCTCAAGGTTGTTGATGGGG...CCTTCCTTTGATTCTCCTTTGGTAGGTGGAATCAGTTAATGTTTTGAGAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR TCA 90 bp TCTGCATTCAAAGAGCACGGCAATGGAAAATACTTTTGGATTCTCCATAGGGGGTTTATTCCAGTCCCTTaGACATCACAGGCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: SAFKEHGNGKYFWILHRGFIPVP*TSQAGF
Trigger: AAAACCAGCCTGTGATGTTCAAGGGACTGGAATAAA...CCCCCTATGGAGAATCCAAAAGTATTTTCCATTGCCGTGCTCTTTGAATGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp ACGATTAAAAATCATCAAACAATGAACACCACGAAGTCTGTCCATGCTCTCCACAGATTTAACAGTCCATaGTCTGCAGCCCCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: TIKNHQTMNTTKSVHALHRFNSP*SAAPGN
Trigger: GTTTCCAGGGGCTGCAGAGCATGGACTGTTAAATCT...GTGGAGAGCATGGACAGACTTCGTGGTGTTCATTGTTTGATGATTTTTAATCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220931.11
CDS-3UTR GCA 90 bp ACGATTAAAAATCATCAAACAATGAACACCACGAAGTCTGTCCATGCTCTCCACCATTTGCATCGAAGGTaGGGAAGACATGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: TIKNHQTMNTTKSVHALHHLHRR*GRHALQ
Trigger: TTGCAGAGCATGTCTTCCGCACCTTCGATGCAAATG...GTGGAGAGCATGGACAGACTTCGTGGTGTTCATTGTTTGATGATTTTTAATCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR GCA 90 bp TTTTATCACAATAGGCAACAAGATGGGTCTGGTTTTGGAATATGTTACCATTTGGCCCATTTCAGCTTCTaGTCCAGCTTCCCCCTCGAA +
Preference number: 4 (lower is better)
Translates to: FYHNRQQDGSGFGICYHLAHFSF*SSFPLE
Trigger: TTCGAGGGGGAAGCTGGAGCAGAAGCTGAAATGGGC...CAAATGGTAACATATTCCAAAACCAGACCCATCTTGTTGCCTATTGTGATAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR GCA 90 bp CTGGAAATGCATTCAAAATTAAAGTTGGGCCCTAGTCAGGGTTACTTTGTATTTCACGAAGTCTGTCCATaGTCTCCACAAGCACACTGG +
Preference number: 4 (lower is better)
Translates to: LEMHSKLKLGPSQGYFVFHEVCP*SPQAHW
Trigger: CCAGTGTGCTTGTGGAGAGCATGGACAGACTTCGTG...AAATACAAAGTAACCCTGACTAGGGCCCAACTTTAATTTTGAATGCATTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR GCA 90 bp GCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTCTTTCACTACCACCTGCTCTaGATCTGCCCTCTAGGCATG +
Preference number: 4 (lower is better)
Translates to: AKHLIWSALPNMLYTAVFHYHLL*ICPLGM
Trigger: CATGCCTAGAGGGCAGATGCAGAGCAGGTGGTAGTG...AAAGACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR GCA 90 bp TCTGCATTCAAAGAGCACGGCAATGGAAAATACTTTTGGATTCTCCATAGGGGGATGTTAACATTCCTGTaGTCCAATTGTCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: SAFKEHGNGKYFWILHRGMLTFL*SNCPVP
Trigger: TGGGACAGGACAATTGGAGCACAGGAATGTTAACAT...CCCCCTATGGAGAATCCAAAAGTATTTTCCATTGCCGTGCTCTTTGAATGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp TTTTATCACAATAGGCAACAAGATGGGTCTGGTTTTGGAATATGTTACCATTTGATGCAGTCTTCTGGGTaGTGTGGAGTCCCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: FYHNRQQDGSGFGICYHLMQSSG*CGVPWP
Trigger: TGGCCAAGGGACTCCACAGCACCCAGAAGACTGCAT...CAAATGGTAACATATTCCAAAACCAGACCCATCTTGTTGCCTATTGTGATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp ACGATTAAAAATCATCAAACAATGAACACCACGAAGTCTGTCCATGCTCTCCACATAAACCTTGAGGCATaGAGTCTTCTGGGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: TIKNHQTMNTTKSVHALHINLEA*SLLGAV
Trigger: CACAGCACCCAGAAGACTGCATGCCTCAAGGTTTAT...GTGGAGAGCATGGACAGACTTCGTGGTGTTCATTGTTTGATGATTTTTAATCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp AAATACAGACAGGGTCAGTGGCAGGCCAGGACAGGGACTATTTCTATACATTCTCCTTTATACCATTCCTaGATCTCATGCTCTGTAAAG +
Preference number: 4 (lower is better)
Translates to: KYRQGQWQARTGTISIHSPLYHS*ISCSVK
Trigger: CTTTACAGAGCATGAGATCCAGGAATGGTATAAAGG...AGAATGTATAGAAATAGTCCCTGTCCTGGCCTGCCACTGACCCTGTCTGTATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp ACGATTAAAAATCATCAAACAATGAACACCACGAAGTCTGTCCATGCTCTCCACGTTTTCCGTCTCTATTaGTGTCCATCTGGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: TIKNHQTMNTTKSVHALHVFRLY*CPSGGR
Trigger: TCTTCCGCCAGATGGACACCAATAGAGACGGAAAAC...GTGGAGAGCATGGACAGACTTCGTGGTGTTCATTGTTTGATGATTTTTAATCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp ACGATTAAAAATCATCAAACAATGAACACCACGAAGTCTGTCCATGCTCTCCACAATCACAGGACTGGATaGGTTTCCCTTCTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: TIKNHQTMNTTKSVHALHNHRTG*VSLLLP
Trigger: GGGCAAAAGAAGGGAAACCCATCCAGTCCTGTGATT...GTGGAGAGCATGGACAGACTTCGTGGTGTTCATTGTTTGATGATTTTTAATCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp GCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTCTTTAATGTCCCAGCTCGCTaGAATAGCCTCACCCCAGAG +
Preference number: 4 (lower is better)
Translates to: AKHLIWSALPNMLYTAVFNVPAR*NSLTPE
Trigger: CTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACATT...AAAGACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp CCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGTTTTGTCTTTCAAACAATTTAACACTTGGCCATaGAGGAATTTGGCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: PYGTCDNRFRWGVLSFKQFNTWP*RNLASF
Trigger: AAAACTTGCCAAATTCCTCCATGGCCAAGTGTTAAA...TTGTTTGAAAGACAAAACTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp CTGGAAATGCATTCAAAATTAAAGTTGGGCCCTAGTCAGGGTTACTTTGTATTTTGCTGTGGAGTCCCTTaGCCAAACTTGAGTGCACTG +
Preference number: 4 (lower is better)
Translates to: LEMHSKLKLGPSQGYFVFCCGVP*PNLSAL
Trigger: CAGTGCACTCAAGTTTGGCCAAGGGACTCCACAGCA...AAATACAAAGTAACCCTGACTAGGGCCCAACTTTAATTTTGAATGCATTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp CCCCTTGAAGCTTGCAATAGAATCACAGGACTGGATGGGTTTCCCTTCTTTTGCCAGGCTGGTTTTATTTaGGACAGAACAGGTTTTATT +
Preference number: 4 (lower is better)
Translates to: PLEACNRITGLDGFPFFCQAGFI*DRTGFI
Trigger: AATAAAACCTGTTCTGTCCCAAATAAAACCAGCCTG...GCAAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTATTGCAAGCTTCAAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR TCA 90 bp CTGGAAATGCATTCAAAATTAAAGTTGGGCCCTAGTCAGGGTTACTTTGTATTTGCATCTCTGCCTTGCTaGTATAGCCATTTCCGTCCA +
Preference number: 4 (lower is better)
Translates to: LEMHSKLKLGPSQGYFVFASLPC*YSHFRP
Trigger: TGGACGGAAATGGCTATATCAGCAAGGCAGAGATGC...AAATACAAAGTAACCCTGACTAGGGCCCAACTTTAATTTTGAATGCATTTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR TCA 90 bp TGTCGATTGGTACATTTGTGCAAAGACAGATATGACTTCCAAACAAGACAGACAGAGTCTGCAGAGTATTaGTCTGCTCAGAAAAGCACC +
Preference number: 4 (lower is better)
Translates to: CRLVHLCKDRYDFQTRQTESAEY*SAQKST
Trigger: GGTGCTTTTCTGAGCAGATCAATACTCTGCAGACTC...TGTCTGTCTTGTTTGGAAGTCATATCTGTCTTTGCACAAATGTACCAATCGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR TCA 90 bp CTGGAAATGCATTCAAAATTAAAGTTGGGCCCTAGTCAGGGTTACTTTGTATTTCCCCATCAACAACCTTaGGAATTTGGGCCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: LEMHSKLKLGPSQGYFVFPHQQP*EFGPPF
Trigger: AAAGGGAGGCCCAAATTCTCAAGGTTGTTGATGGGG...AAATACAAAGTAACCCTGACTAGGGCCCAACTTTAATTTTGAATGCATTTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR TCA 90 bp AGGTTTCTCAAAACATTAACTGATTCCACCTACCAAAGGAGAATCAAAGGAAGGAGCTCCCTCCCACTCTaGATGATGTATGAACAGTTG +
Preference number: 4 (lower is better)
Translates to: RFLKTLTDSTYQRRIKGRSSLPL*MMYEQL
Trigger: CAACTGTTCATACATCATTCAGAGTGGGAGGGAGCT...CCTTCCTTTGATTCTCCTTTGGTAGGTGGAATCAGTTAATGTTTTGAGAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp AAATACAGACAGGGTCAGTGGCAGGCCAGGACAGGGACTATTTCTATACATTCTGATGAATTTGATGACTaGCCAACCTCTGATTCTTTA +
Preference number: 4 (lower is better)
Translates to: KYRQGQWQARTGTISIHSDEFDD*PTSDSL
Trigger: TAAAGAATCAGAGGTTGGGCAGTCATCAAATTCATC...AGAATGTATAGAAATAGTCCCTGTCCTGGCCTGCCACTGACCCTGTCTGTATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp AACTACTTGCAAGAGTATGACTCGCCTGTAACCAGCAAATTTTTACTCTTAGCTCGGCATTCATCAGCCTaGATGTGGCTCACTTTTCTT +
Preference number: 4 (lower is better)
Translates to: NYLQEYDSPVTSKFLLLARHSSA*MWLTFL
Trigger: AAGAAAAGTGAGCCACATGCAGGCTGATGAATGCCG...AGCTAAGAGTAAAAATTTGCTGGTTACAGGCGAGTCATACTCTTGCAAGTAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp TCTGCATTCAAAGAGCACGGCAATGGAAAATACTTTTGGATTCTCCATAGGGGGATAGAATCACAGGACTaGATGGGTTTCCCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: SAFKEHGNGKYFWILHRGIESQD*MGFPSF
Trigger: AAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTAT...CCCCCTATGGAGAATCCAAAAGTATTTTCCATTGCCGTGCTCTTTGAATGCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp TCTGCATTCAAAGAGCACGGCAATGGAAAATACTTTTGGATTCTCCATAGGGGGGACAACAGATTCAGGTaGGGAGTTTTGTCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: SAFKEHGNGKYFWILHRGDNRFR*GVLSFK
Trigger: TTTGAAAGACAAAACTCCCCACCTGAATCTGTTGTC...CCCCCTATGGAGAATCCAAAAGTATTTTCCATTGCCGTGCTCTTTGAATGCAGA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp TCATCAAACAATGAACACCACGAAGTCTGTCCATGCTCTCCACAAGCACACTGGGCAAAACACTTAATTTaGTCTGCATTACCCAATATG +
Preference number: 4 (lower is better)
Translates to: SSNNEHHEVCPCSPQAHWAKHLI*SALPNM
Trigger: CATATTGGGTAATGCAGACCAAATTAAGTGTTTTGC...CCAGTGTGCTTGTGGAGAGCATGGACAGACTTCGTGGTGTTCATTGTTTGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp CAAGGCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTGGGAAACCACCCTACTaGTCCCCTGTCATACATGTT +
Preference number: 4 (lower is better)
Translates to: QGKTLNLVCITQYVIYSRGKPPY*SPVIHV
Trigger: AACATGTATGACAGGGGACCAGTAGGGTGGTTTCCC...ACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp GAAGCTTGCAATAGAATCACAGGACTGGATGGGTTTCCCTTCTTTTGCCCCAACCATAGATTAAACCACTaGGAAGTTCCAAGAATGTAT +
Preference number: 4 (lower is better)
Translates to: EACNRITGLDGFPFFCPNHRLNH*EVPRMY
Trigger: ATACATTCTTGGAACTTCCCAGTGGTTTAATCTATG...GTTGGGGCAAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTATTGCAAGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000521599.5
CDS-3UTR CCA 90 bp CCCCTTGAAGCTTGCAATAGAATCACAGGACTGGATGGGTTTCCCTTCTTTTGCTCTACCATACAAATTTaGATTTCTGCTGCCAATTAC +
Preference number: 4 (lower is better)
Translates to: PLEACNRITGLDGFPFFCSTIQI*ISAANY
Trigger: GTAATTGGCAGCAGAAATCCAAATTTGTATGGTAGA...GCAAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTATTGCAAGCTTCAAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR CAA 72 bp GGCATGGCCACTCTGGAAATGCATTCAAAATTAAAGTaGGGCCCTAGTCAGGGTTACTTTGTATTTTTATGG +
Preference number: 4 (lower is better)
Translates to: GMATLEMHSKLK*GPSQGYFVFLW
Trigger: CCATAAAAATACAAAGTAACCCTGACTAGGGCCCAACTTTAATTTTGAATGCATTTCCAGAGTGGCCATGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR TCA 90 bp CTGGAAATGCATTCAAAATTAAAGTTGGGCCCTAGTCAGGGTTACTTTGTATTTGAGTCTGCAGAGTATTaGTCTGCTCAGAAAAGCACC +
Preference number: 4 (lower is better)
Translates to: LEMHSKLKLGPSQGYFVFESAEY*SAQKST
Trigger: GGTGCTTTTCTGAGCAGATCAATACTCTGCAGACTC...AAATACAAAGTAACCCTGACTAGGGCCCAACTTTAATTTTGAATGCATTTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR TCA 90 bp GCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTCTTTTCCCTTGGCCAAACTTaGGTGCACTGGATTCGACAT +
Preference number: 4 (lower is better)
Translates to: AKHLIWSALPNMLYTAVFSLGQT*VHWIRH
Trigger: ATGTCGAATCCAGTGCACTCAAGTTTGGCCAAGGGA...AAAGACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp CTGGAAATGCATTCAAAATTAAAGTTGGGCCCTAGTCAGGGTTACTTTGTATTTCATTTGCATCGAAGGTaGGGAAGACATGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: LEMHSKLKLGPSQGYFVFHLHRR*GRHALQ
Trigger: TTGCAGAGCATGTCTTCCGCACCTTCGATGCAAATG...AAATACAAAGTAACCCTGACTAGGGCCCAACTTTAATTTTGAATGCATTTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR GCA 90 bp GCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTCTTTTTAGAAACTACAGCCTaGTGGGGAAGAGAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: AKHLIWSALPNMLYTAVFLETTA*WGREGS
Trigger: ACTCCCCTCTCTTCCCCAGCAGGCTGTAGTTTCTAA...AAAGACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR GCA 90 bp TTTTATCACAATAGGCAACAAGATGGGTCTGGTTTTGGAATATGTTACCATTTGTTAGAAACTACAGCCTaGTGGGGAAGAGAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: FYHNRQQDGSGFGICYHLLETTA*WGREGS
Trigger: ACTCCCCTCTCTTCCCCAGCAGGCTGTAGTTTCTAA...CAAATGGTAACATATTCCAAAACCAGACCCATCTTGTTGCCTATTGTGATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR GCA 90 bp GCTGTCACTTCTGGAAATAGAAGTCTGCATTCAAAGAGCACGGCAATGGAAAATAACCACAGACACACTTaGCCATGTCTTTATGATGAA +
Preference number: 4 (lower is better)
Translates to: AVTSGNRSLHSKSTAMENNHRHT*PCLYDE
Trigger: TTCATCATAAAGACATGGGCAAGTGTGTCTGTGGTT...ATTTTCCATTGCCGTGCTCTTTGAATGCAGACTTCTATTTCCAGAAGTGACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp GGCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTCTTCGGCATTCATCAGCCTaGATGTGGCTCACTTTTCTT +
Preference number: 4 (lower is better)
Translates to: GKTLNLVCITQYVIYSRLRHSSA*MWLTFL
Trigger: AAGAAAAGTGAGCCACATGCAGGCTGATGAATGCCG...AAGACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp TATACAGCCGTCTTTTTATTTTATCACAATAGGCAACAAGATGGGTCTGGTTTTTCTGTTTCCCCATCCTaGCGGCAAGAATTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: YTAVFLFYHNRQQDGSGFSVSPS*RQEFSS
Trigger: TGAGCTGAATTCTTGCCGCCAGGATGGGGAAACAGA...AAAACCAGACCCATCTTGTTGCCTATTGTGATAAAATAAAAAGACGGCTGTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000220931.11
ENST00000522951.5
CDS-3UTR CCA 90 bp TTTTATCACAATAGGCAACAAGATGGGTCTGGTTTTGGAATATGTTACCATTTGAGGGTAACTTGTTCTTaGGGAATCCAGCATCCGGTG +
Preference number: 4 (lower is better)
Translates to: FYHNRQQDGSGFGICYHLRVTCS*GIQHPV
Trigger: CACCGGATGCTGGATTCCCCAAGAACAAGTTACCCT...CAAATGGTAACATATTCCAAAACCAGACCCATCTTGTTGCCTATTGTGATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp AGGTTTCTCAAAACATTAACTGATTCCACCTACCAAAGGAGAATCAAAGGAAGGGGCCATGGAGGAATTTaGCAAGTTTTGGTACAGAAC +
Preference number: 4 (lower is better)
Translates to: RFLKTLTDSTYQRRIKGRGHGGI*QVLVQN
Trigger: GTTCTGTACCAAAACTTGCCAAATTCCTCCATGGCC...CCTTCCTTTGATTCTCCTTTGGTAGGTGGAATCAGTTAATGTTTTGAGAAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR TCA 90 bp CTGGAAATGCATTCAAAATTAAAGTTGGGCCCTAGTCAGGGTTACTTTGTATTTCTTAAACTCTTCCATTaGCAAATGTCCACTGGGGCA +
Preference number: 4 (lower is better)
Translates to: LEMHSKLKLGPSQGYFVFLKLFH*QMSTGA
Trigger: TGCCCCAGTGGACATTTGTCAATGGAAGAGTTTAAG...AAATACAAAGTAACCCTGACTAGGGCCCAACTTTAATTTTGAATGCATTTCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR TCA 90 bp TGTCGATTGGTACATTTGTGCAAAGACAGATATGACTTCCAAACAAGACAGACATCTTTTCTCTGGGGTTaGCTCATCTTCAGGCATTTT +
Preference number: 4 (lower is better)
Translates to: CRLVHLCKDRYDFQTRQTSFLWG*LIFRHF
Trigger: AAAATGCCTGAAGATGAGTCAACCCCAGAGAAAAGA...TGTCTGTCTTGTTTGGAAGTCATATCTGTCTTTGCACAAATGTACCAATCGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR TCA 90 bp ACGATTAAAAATCATCAAACAATGAACACCACGAAGTCTGTCCATGCTCTCCACAAAATCATCAAACAATaGACACCACGAAGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: TIKNHQTMNTTKSVHALHKIIKQ*TPRSLS
Trigger: GGACAGACTTCGTGGTGTTCATTGTTTGATGATTTT...GTGGAGAGCATGGACAGACTTCGTGGTGTTCATTGTTTGATGATTTTTAATCGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR TCA 90 bp TGTCGATTGGTACATTTGTGCAAAGACAGATATGACTTCCAAACAAGACAGACAGTGCAAAGACAGATATaGCTTCCAAACAAGACAGAC +
Preference number: 4 (lower is better)
Translates to: CRLVHLCKDRYDFQTRQTVQRQI*LPNKTD
Trigger: GTCTGTCTTGTTTGGAAGTCATATCTGTCTTTGCAC...TGTCTGTCTTGTTTGGAAGTCATATCTGTCTTTGCACAAATGTACCAATCGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR TCA 90 bp TTTTATCACAATAGGCAACAAGATGGGTCTGGTTTTGGAATATGTTACCATTTGAGCTACACAGTCAACTaGTTTACGGGCCACTCCATA +
Preference number: 4 (lower is better)
Translates to: FYHNRQQDGSGFGICYHLSYTVN*FTGHSI
Trigger: TATGGAGTGGCCCGTAAATCAGTTGACTGTGTAGCT...CAAATGGTAACATATTCCAAAACCAGACCCATCTTGTTGCCTATTGTGATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp TATACAGCCGTCTTTTTATTTTATCACAATAGGCAACAAGATGGGTCTGGTTTTCATTTGCATCGAAGGTaGGGAAGACATGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: YTAVFLFYHNRQQDGSGFHLHRR*GRHALQ
Trigger: TTGCAGAGCATGTCTTCCGCACCTTCGATGCAAATG...AAAACCAGACCCATCTTGTTGCCTATTGTGATAAAATAAAAAGACGGCTGTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR GCA 90 bp AACTACTTGCAAGAGTATGACTCGCCTGTAACCAGCAAATTTTTACTCTTAGCTCTGGAAATAGAAGTCTaGATTCAAAGAGCACGGCAA +
Preference number: 4 (lower is better)
Translates to: NYLQEYDSPVTSKFLLLALEIEV*IQRARQ
Trigger: TTGCCGTGCTCTTTGAATGCAGACTTCTATTTCCAG...AGCTAAGAGTAAAAATTTGCTGGTTACAGGCGAGTCATACTCTTGCAAGTAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp AGGTTTCTCAAAACATTAACTGATTCCACCTACCAAAGGAGAATCAAAGGAAGGTTGGCCAAACTTGAGTaGACTGGATTCGACATACAA +
Preference number: 4 (lower is better)
Translates to: RFLKTLTDSTYQRRIKGRLAKLE*TGFDIQ
Trigger: TTGTATGTCGAATCCAGTGCACTCAAGTTTGGCCAA...CCTTCCTTTGATTCTCCTTTGGTAGGTGGAATCAGTTAATGTTTTGAGAAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp TTTTATCACAATAGGCAACAAGATGGGTCTGGTTTTGGAATATGTTACCATTTGATAAACCTTGAGGCATaGAGTCTTCTGGGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: FYHNRQQDGSGFGICYHLINLEA*SLLGAV
Trigger: CACAGCACCCAGAAGACTGCATGCCTCAAGGTTTAT...CAAATGGTAACATATTCCAAAACCAGACCCATCTTGTTGCCTATTGTGATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp TATACAGCCGTCTTTTTATTTTATCACAATAGGCAACAAGATGGGTCTGGTTTTGTTTTCCGTCTCTATTaGTGTCCATCTGGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: YTAVFLFYHNRQQDGSGFVFRLY*CPSGGR
Trigger: TCTTCCGCCAGATGGACACCAATAGAGACGGAAAAC...AAAACCAGACCCATCTTGTTGCCTATTGTGATAAAATAAAAAGACGGCTGTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp TTTTATCACAATAGGCAACAAGATGGGTCTGGTTTTGGAATATGTTACCATTTGTCTGTTTCCCCATCCTaGCGGCAAGAATTCAGAGTA +
Preference number: 4 (lower is better)
Translates to: FYHNRQQDGSGFGICYHLSVSPS*RQEFRV
Trigger: TACTCTGAATTCTTGCCGCCAGGATGGGGAAACAGA...CAAATGGTAACATATTCCAAAACCAGACCCATCTTGTTGCCTATTGTGATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311028.4
CDS-3UTR TCA 90 bp CAAGGCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTTCTTTTCTCTGGGGTTaGCTCATCTTCAGGCATTTT +
Preference number: 4 (lower is better)
Translates to: QGKTLNLVCITQYVIYSRSFLWG*LIFRHF
Trigger: AAAATGCCTGAAGATGAGTCAACCCCAGAGAAAAGA...ACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR TCA 90 bp TGTCGATTGGTACATTTGTGCAAAGACAGATATGACTTCCAAACAAGACAGACAAAAATCATCAAACAATaGACACCACGAAGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: CRLVHLCKDRYDFQTRQTKIIKQ*TPRSLS
Trigger: GGACAGACTTCGTGGTGTTCATTGTTTGATGATTTT...TGTCTGTCTTGTTTGGAAGTCATATCTGTCTTTGCACAAATGTACCAATCGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR TCA 90 bp AGGTTTCTCAAAACATTAACTGATTCCACCTACCAAAGGAGAATCAAAGGAAGGACTCTGAATGATGTATaGACAGTTGAGCACTCTGTA +
Preference number: 4 (lower is better)
Translates to: RFLKTLTDSTYQRRIKGRTLNDV*TVEHSV
Trigger: TACAGAGTGCTCAACTGTTCATACATCATTCAGAGT...CCTTCCTTTGATTCTCCTTTGGTAGGTGGAATCAGTTAATGTTTTGAGAAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp GGCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTCTTCATTCCTGGATCTCATaGTCTGTAAAGTCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: GKTLNLVCITQYVIYSRLHSWIS*SVKSVL
Trigger: AAGCACAGACTTTACAGAGCATGAGATCCAGGAATG...AAGACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR GCA 90 bp ACGATTAAAAATCATCAAACAATGAACACCACGAAGTCTGTCCATGCTCTCCACCGATTGGTACATTTGTaGAAAGACAGATATGACTTC +
Preference number: 4 (lower is better)
Translates to: TIKNHQTMNTTKSVHALHRLVHL*KDRYDF
Trigger: GAAGTCATATCTGTCTTTGCACAAATGTACCAATCG...GTGGAGAGCATGGACAGACTTCGTGGTGTTCATTGTTTGATGATTTTTAATCGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR GCA 90 bp CAAGGCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTATGTTAACATTCCTGTaGTCCAATTGTCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: QGKTLNLVCITQYVIYSRMLTFL*SNCPVP
Trigger: TGGGACAGGACAATTGGAGCACAGGAATGTTAACAT...ACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp AACTACTTGCAAGAGTATGACTCGCCTGTAACCAGCAAATTTTTACTCTTAGCTCCTTTATACCATTCCTaGATCTCATGCTCTGTAAAG +
Preference number: 4 (lower is better)
Translates to: NYLQEYDSPVTSKFLLLAPLYHS*ISCSVK
Trigger: CTTTACAGAGCATGAGATCCAGGAATGGTATAAAGG...AGCTAAGAGTAAAAATTTGCTGGTTACAGGCGAGTCATACTCTTGCAAGTAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp TGTCGATTGGTACATTTGTGCAAAGACAGATATGACTTCCAAACAAGACAGACAGACAACAGATTCAGGTaGGGAGTTTTGTCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: CRLVHLCKDRYDFQTRQTDNRFR*GVLSFK
Trigger: TTTGAAAGACAAAACTCCCCACCTGAATCTGTTGTC...TGTCTGTCTTGTTTGGAAGTCATATCTGTCTTTGCACAAATGTACCAATCGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CCA 90 bp GCTGTCACTTCTGGAAATAGAAGTCTGCATTCAAAGAGCACGGCAATGGAAAATGCAAAACACTTAATTTaGTCTGCATTACCCAATATG +
Preference number: 4 (lower is better)
Translates to: AVTSGNRSLHSKSTAMENAKHLI*SALPNM
Trigger: CATATTGGGTAATGCAGACCAAATTAAGTGTTTTGC...ATTTTCCATTGCCGTGCTCTTTGAATGCAGACTTCTATTTCCAGAAGTGACAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
3UTR CAA 72 bp CTATGGATTTGGTTCTTTTTGGTCTACCATACAAATTaGGATTTCTGCTGCCAATTACAGCAGACTCAAGTC +
Preference number: 4 (lower is better)
Translates to: LWIWFFLVYHTN*DFCCQLQQTQV
Trigger: GACTTGAGTCTGCTGTAATTGGCAGCAGAAATCCAAATTTGTATGGTAGACCAAAAAGAACCAAATCCATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR TCA 90 bp GGCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTCTTACTCTGAATGATGTATaGACAGTTGAGCACTCTGTA +
Preference number: 4 (lower is better)
Translates to: GKTLNLVCITQYVIYSRLTLNDV*TVEHSV
Trigger: TACAGAGTGCTCAACTGTTCATACATCATTCAGAGT...AAGACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp GCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTCTTTCATTCCTGGATCTCATaGTCTGTAAAGTCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: AKHLIWSALPNMLYTAVFHSWIS*SVKSVL
Trigger: AAGCACAGACTTTACAGAGCATGAGATCCAGGAATG...AAAGACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR GCA 90 bp AACTACTTGCAAGAGTATGACTCGCCTGTAACCAGCAAATTTTTACTCTTAGCTCGATTGGTACATTTGTaGAAAGACAGATATGACTTC +
Preference number: 4 (lower is better)
Translates to: NYLQEYDSPVTSKFLLLARLVHL*KDRYDF
Trigger: GAAGTCATATCTGTCTTTGCACAAATGTACCAATCG...AGCTAAGAGTAAAAATTTGCTGGTTACAGGCGAGTCATACTCTTGCAAGTAGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp CAAGGCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTAACCACAGACACACTTaGCCATGTCTTTATGATGAA +
Preference number: 4 (lower is better)
Translates to: QGKTLNLVCITQYVIYSRNHRHT*PCLYDE
Trigger: TTCATCATAAAGACATGGGCAAGTGTGTCTGTGGTT...ACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000521599.5
CDS-3UTR GCA 90 bp TATACAGCCGTCTTTTTATTTTATCACAATAGGCAACAAGATGGGTCTGGTTTTTTGGCCAAACTTGAGTaGACTGGATTCGACATACAA +
Preference number: 4 (lower is better)
Translates to: YTAVFLFYHNRQQDGSGFLAKLE*TGFDIQ
Trigger: TTGTATGTCGAATCCAGTGCACTCAAGTTTGGCCAA...AAAACCAGACCCATCTTGTTGCCTATTGTGATAAAATAAAAAGACGGCTGTATA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp CAAGGCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTGACAACAGATTCAGGTaGGGAGTTTTGTCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: QGKTLNLVCITQYVIYSRDNRFR*GVLSFK
Trigger: TTTGAAAGACAAAACTCCCCACCTGAATCTGTTGTC...ACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp AGGTTTCTCAAAACATTAACTGATTCCACCTACCAAAGGAGAATCAAAGGAAGGTTCACCCTATGGATTTaGTTCTTTTTGGTCTACCAT +
Preference number: 4 (lower is better)
Translates to: RFLKTLTDSTYQRRIKGRFTLWI*FFLVYH
Trigger: ATGGTAGACCAAAAAGAACCAAATCCATAGGGTGAA...CCTTCCTTTGATTCTCCTTTGGTAGGTGGAATCAGTTAATGTTTTGAGAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp CAAGGCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTACAGATTTTAACACTTaGCCATGGAGGAATTTGGCA +
Preference number: 4 (lower is better)
Translates to: QGKTLNLVCITQYVIYSRTDFNT*PWRNLA
Trigger: TGCCAAATTCCTCCATGGCCAAGTGTTAAAATCTGT...ACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR TCA 90 bp TTTTATCACAATAGGCAACAAGATGGGTCTGGTTTTGGAATATGTTACCATTTGACTCTGAATGATGTATaGACAGTTGAGCACTCTGTA +
Preference number: 4 (lower is better)
Translates to: FYHNRQQDGSGFGICYHLTLNDV*TVEHSV
Trigger: TACAGAGTGCTCAACTGTTCATACATCATTCAGAGT...CAAATGGTAACATATTCCAAAACCAGACCCATCTTGTTGCCTATTGTGATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp CAAGGCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTACAAATTTGGATTTCTaGTGCCAATTACAGCAGACT +
Preference number: 4 (lower is better)
Translates to: QGKTLNLVCITQYVIYSRTNLDF*CQLQQT
Trigger: AGTCTGCTGTAATTGGCAGCAGAAATCCAAATTTGT...ACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR GCA 90 bp CTGGAAATGCATTCAAAATTAAAGTTGGGCCCTAGTCAGGGTTACTTTGTATTTACAAATTTGGATTTCTaGTGCCAATTACAGCAGACT +
Preference number: 4 (lower is better)
Translates to: LEMHSKLKLGPSQGYFVFTNLDF*CQLQQT
Trigger: AGTCTGCTGTAATTGGCAGCAGAAATCCAAATTTGT...AAATACAAAGTAACCCTGACTAGGGCCCAACTTTAATTTTGAATGCATTTCCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp TATACAGCCGTCTTTTTATTTTATCACAATAGGCAACAAGATGGGTCTGGTTTTATAGAATCACAGGACTaGATGGGTTTCCCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: YTAVFLFYHNRQQDGSGFIESQD*MGFPSF
Trigger: AAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTAT...AAAACCAGACCCATCTTGTTGCCTATTGTGATAAAATAAAAAGACGGCTGTATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp TTTTATCACAATAGGCAACAAGATGGGTCTGGTTTTGGAATATGTTACCATTTGGACAACAGATTCAGGTaGGGAGTTTTGTCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: FYHNRQQDGSGFGICYHLDNRFR*GVLSFK
Trigger: TTTGAAAGACAAAACTCCCCACCTGAATCTGTTGTC...CAAATGGTAACATATTCCAAAACCAGACCCATCTTGTTGCCTATTGTGATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp GCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTCTTTGACAACAGATTCAGGTaGGGAGTTTTGTCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: AKHLIWSALPNMLYTAVFDNRFR*GVLSFK
Trigger: TTTGAAAGACAAAACTCCCCACCTGAATCTGTTGTC...AAAGACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp GGCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTCTTAGATGGGTCTGGTTTTaGAATATGTTACCATTTGTG +
Preference number: 4 (lower is better)
Translates to: GKTLNLVCITQYVIYSRLRWVWF*NMLPFV
Trigger: CACAAATGGTAACATATTCCAAAACCAGACCCATCT...AAGACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp CAAGGCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTAGATGGGTCTGGTTTTaGAATATGTTACCATTTGTG +
Preference number: 4 (lower is better)
Translates to: QGKTLNLVCITQYVIYSRRWVWF*NMLPFV
Trigger: CACAAATGGTAACATATTCCAAAACCAGACCCATCT...ACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CCA 90 bp AGGTTTCTCAAAACATTAACTGATTCCACCTACCAAAGGAGAATCAAAGGAAGGCATAGATTAAACCACTaGGAAGTTCCAAGAATGTAT +
Preference number: 4 (lower is better)
Translates to: RFLKTLTDSTYQRRIKGRHRLNH*EVPRMY
Trigger: ATACATTCTTGGAACTTCCCAGTGGTTTAATCTATG...CCTTCCTTTGATTCTCCTTTGGTAGGTGGAATCAGTTAATGTTTTGAGAAACCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp AACTACTTGCAAGAGTATGACTCGCCTGTAACCAGCAAATTTTTACTCTTAGCTTCTACCATACAAATTTaGATTTCTGCTGCCAATTAC +
Preference number: 4 (lower is better)
Translates to: NYLQEYDSPVTSKFLLLASTIQI*ISAANY
Trigger: GTAATTGGCAGCAGAAATCCAAATTTGTATGGTAGA...AGCTAAGAGTAAAAATTTGCTGGTTACAGGCGAGTCATACTCTTGCAAGTAGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp GCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTCTTTTTGAACATCACAGGCTaGTTTTATTTGGGACAGAAC +
Preference number: 4 (lower is better)
Translates to: AKHLIWSALPNMLYTAVFLNITG*FYLGQN
Trigger: GTTCTGTCCCAAATAAAACCAGCCTGTGATGTTCAA...AAAGACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp GCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTCTTTTTCACCCTATGGATTTaGTTCTTTTTGGTCTACCAT +
Preference number: 4 (lower is better)
Translates to: AKHLIWSALPNMLYTAVFFTLWI*FFLVYH
Trigger: ATGGTAGACCAAAAAGAACCAAATCCATAGGGTGAA...AAAGACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp TTTTATCACAATAGGCAACAAGATGGGTCTGGTTTTGGAATATGTTACCATTTGTTTAACACTTGGCCATaGAGGAATTTGGCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: FYHNRQQDGSGFGICYHLFNTWP*RNLASF
Trigger: AAAACTTGCCAAATTCCTCCATGGCCAAGTGTTAAA...CAAATGGTAACATATTCCAAAACCAGACCCATCTTGTTGCCTATTGTGATAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp TTTTATCACAATAGGCAACAAGATGGGTCTGGTTTTGGAATATGTTACCATTTGCAGGCTGGTTTTATTTaGGACAGAACAGGTTTTATT +
Preference number: 4 (lower is better)
Translates to: FYHNRQQDGSGFGICYHLQAGFI*DRTGFI
Trigger: AATAAAACCTGTTCTGTCCCAAATAAAACCAGCCTG...CAAATGGTAACATATTCCAAAACCAGACCCATCTTGTTGCCTATTGTGATAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CCA 90 bp GCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTCTTTCATAGATTAAACCACTaGGAAGTTCCAAGAATGTAT +
Preference number: 4 (lower is better)
Translates to: AKHLIWSALPNMLYTAVFHRLNH*EVPRMY
Trigger: ATACATTCTTGGAACTTCCCAGTGGTTTAATCTATG...AAAGACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000521599.5
CDS-3UTR CCA 90 bp TTTTATCACAATAGGCAACAAGATGGGTCTGGTTTTGGAATATGTTACCATTTGCATAGATTAAACCACTaGGAAGTTCCAAGAATGTAT +
Preference number: 4 (lower is better)
Translates to: FYHNRQQDGSGFGICYHLHRLNH*EVPRMY
Trigger: ATACATTCTTGGAACTTCCCAGTGGTTTAATCTATG...CAAATGGTAACATATTCCAAAACCAGACCCATCTTGTTGCCTATTGTGATAAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000521599.5
CDS-3UTR CCA 90 bp TATACAGCCGTCTTTTTATTTTATCACAATAGGCAACAAGATGGGTCTGGTTTTTATTTCTATACATTCTaGAAGTGTCGGCATTCATCA +
Preference number: 4 (lower is better)
Translates to: YTAVFLFYHNRQQDGSGFYFYTF*KCRHSS
Trigger: TGATGAATGCCGACACTTCCAGAATGTATAGAAATA...AAAACCAGACCCATCTTGTTGCCTATTGTGATAAAATAAAAAGACGGCTGTATA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS GCA 90 bp AGGCCTCTAGCCAGCCTGCACTGCTACTTTCCAAGGGGTGCCATCTaGTTGCCTCCTCGGGTCCTGGGAGGTCAGATTCAGCCTAGAGCA +
Preference number: 5 (lower is better)
Translates to: RPLASLHCYFPRGAI*LPPRVLGGQIQPRA
Trigger: TGCTCTAGGCTGAATCTGACCTCCCAGGACCCGAGGAGGCAAGCAGATGGCACCCCTTGGAAAGTAGCAGTGCAGGCTGGCTAGAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395923.5
ENST00000522078.5
CDS GCA 90 bp CAAGTCAGAAGAAATCACTCGCCCAGGCCTCTAGCCAGCCTGCACTaGTACTTTCCAAGGGGTGCCATCTGCTTGCCTCCTCGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: QVRRNHSPRPLASLH*YFPRGAICLPPRVL
Trigger: CAGGACCCGAGGAGGCAAGCAGATGGCACCCCTTGGAAAGTAGCAGTGCAGGCTGGCTAGAGGCCTGGGCGAGTGATTTCTTCTGACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395923.5
ENST00000522078.5
CDS-3UTR CAA 90 bp GGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGAAGCTCTACAATTCGATaGGTGGGCGCAGGGCTCAGA +
Preference number: 5 (lower is better)
Translates to: GNPASGAIHHPYGTCDNRSSTIR*VGAGLR
Trigger: TCTGAGCCCTGCGCCCACCAATCGAATTGTAGAGCT...TCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CAA 90 bp GTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTGGTCCCCTGTCATAAGCTCTACAATTCGATaGGTGGGCGCAGGGCTCAGA +
Preference number: 5 (lower is better)
Translates to: VNGLLGLRGKPPYWSPVISSTIR*VGAGLR
Trigger: TCTGAGCCCTGCGCCCACCAATCGAATTGTAGAGCT...TATGACAGGGGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CAA 90 bp CCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGGTCCCTTGGCCAAACTaGAGTGCACTGGATTCGACA +
Preference number: 5 (lower is better)
Translates to: PVPSITPTARVTTDSGGEVPWPN*SALDST
Trigger: TGTCGAATCCAGTGCACTCAAGTTTGGCCAAGGGAC...CTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp GGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGAGTGCTGTGGAGTCCCTaGGCCAAACTTGAGTGCACT +
Preference number: 5 (lower is better)
Translates to: GNPASGAIHHPYGTCDNRVLWSP*AKLECT
Trigger: AGTGCACTCAAGTTTGGCCAAGGGACTCCACAGCAC...TCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS CCA 90 bp ACTGCTACTTTCCAAGGGGTGCCATCTGCTTGCCTCCTCGGGTCCTaGGAGGTCAGATTCAGCCTAGAGCACCTCCTTCCAAGCTTCGAT +
Preference number: 5 (lower is better)
Translates to: TATFQGVPSACLLGS*EVRFSLEHLLPSFD
Trigger: ATCGAAGCTTGGAAGGAGGTGCTCTAGGCTGAATCTGACCTCCCAGGACCCGAGGAGGCAAGCAGATGGCACCCCTTGGAAAGTAGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395923.5
ENST00000522078.5
CDS-3UTR CAA 90 bp CTTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGACCCCAGAGGGTAACTaGTTCTTGGGGAATCCAGCA +
Preference number: 5 (lower is better)
Translates to: LVLGESSIRCHPSPLRHVTPEGN*FLGNPA
Trigger: TGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGT...CACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CAA 90 bp GGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATGTGGTTCCTCTTCTTaGGCAAGTGGCTTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: GNPASGAIHHPYGTCDNRCGSSS*ASGLAA
Trigger: TGCTGCCAAGCCACTTGCCAAAGAAGAGGAACCACA...TCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp TCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAGTCCCTTGGCCAAACTaGAGTGCACTGGATTCGACA +
Preference number: 5 (lower is better)
Translates to: SWGIQHPVPSITPTARVTVPWPN*SALDST
Trigger: TGTCGAATCCAGTGCACTCAAGTTTGGCCAAGGGAC...TGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp CATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGTTGTCCCATCTCCATTaGCATCGAAGGTGCGGAAGA +
Preference number: 5 (lower is better)
Translates to: HPVPSITPTARVTTDSGGLSHLH*HRRCGR
Trigger: TCTTCCGCACCTTCGATGCAAATGGAGATGGGACAA...CCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CAA 90 bp GGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGAAGTTTTCCGTCTCTATaGGTGTCCATCTGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: GNPASGAIHHPYGTCDNRSFPSL*VSIWRK
Trigger: CTTCCGCCAGATGGACACCAATAGAGACGGAAAACT...TCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CAA 90 bp GTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTGGTCCCCTGTCATAAGTTTTCCGTCTCTATaGGTGTCCATCTGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: VNGLLGLRGKPPYWSPVISFPSL*VSIWRK
Trigger: CTTCCGCCAGATGGACACCAATAGAGACGGAAAACT...TATGACAGGGGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CAA 90 bp GTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGTTTTGGGTTTCCCTTCTTTaGCCCCAACCCCCGAGTCTT +
Preference number: 5 (lower is better)
Translates to: VPSITPTARVTTDSGGEFWVSLL*PQPPSL
Trigger: AAGACTCGGGGGTTGGGGCAAAAGAAGGGAAACCCA...AAACTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CAA 90 bp ATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGATGGGTTTCCCTTCTTTaGCCCCAACCCCCGAGTCTT +
Preference number: 5 (lower is better)
Translates to: MSQLAGIASPQRVTCSWGWVSLL*PQPPSL
Trigger: AAGACTCGGGGGTTGGGGCAAAAGAAGGGAAACCCA...TCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CAA 90 bp ATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGAGTGCTGTGGAGTCCCTaGGCCAAACTTGAGTGCACT +
Preference number: 5 (lower is better)
Translates to: MSQLAGIASPQRVTCSWGVLWSP*AKLECT
Trigger: AGTGCACTCAAGTTTGGCCAAGGGACTCCACAGCAC...TCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS TCA 90 bp CCCTGCTCTACCGCAGTGAAGTTCAAGGGAGCCTTGGAAGGCAGTTaGAAAGCTTCTCAGGTGGTGTCCTCTGGACTCTTCATGCCCACA +
Preference number: 5 (lower is better)
Translates to: PCSTAVKFKGALEGS*KASQVVSSGLFMPT
Trigger: TGTGGGCATGAAGAGTCCAGAGGACACCACCTGAGAAGCTTTTCAACTGCCTTCCAAGGCTCCCTTGAACTTCACTGCGGTAGAGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395923.5
ENST00000522078.5
ENST00000522206.5
CDS CCA 90 bp CCCATCCTGGCGGCAAGAATTCAGAGTATGCAGTCACTCAGTGCCTaGGATCTCGGGGCCTTCCTCGGTATCACGACAGATTTTAACACC +
Preference number: 5 (lower is better)
Translates to: PILAARIQSMQSLSA*DLGAFLGITTDFNT
Trigger: GGTGTTAAAATCTGTCGTGATACCGAGGAAGGCCCCGAGATCCCAGGCACTGAGTGACTGCATACTCTGAATTCTTGCCGCCAGGATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311028.4
ENST00000518661.5
ENST00000521964.5
ENST00000522078.5
CDS-3UTR CAA 90 bp GCTCTGGGCATTCCCACGAAGCATCCACGACAAAAGAAGCTGAAGGCGTCACGGTTGTCCCATCTCCATTaGCATCGAAGGTGCGGAAGA +
Preference number: 5 (lower is better)
Translates to: ALGIPTKHPRQKKLKASRLSHLH*HRRCGR
Trigger: TCTTCCGCACCTTCGATGCAAATGGAGATGGGACAA...CCGTGACGCCTTCAGCTTCTTTTGTCGTGGATGCTTCGTGGGAATGCCCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CAA 90 bp TTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTAGTTTTCCGTCTCTATaGGTGTCCATCTGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: LFLGNPASGAIHHPYGTCSFPSL*VSIWRK
Trigger: CTTCCGCCAGATGGACACCAATAGAGACGGAAAACT...ACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CAA 90 bp GGAAATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGAGCTCTACAATTCGATaGGTGGGCGCAGGGCTCAGA +
Preference number: 5 (lower is better)
Translates to: GNVPARWNSLTPEGNLFLSSTIR*VGAGLR
Trigger: TCTGAGCCCTGCGCCCACCAATCGAATTGTAGAGCT...CAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CAA 90 bp GTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGTTTGAGGGTAACTTGTTCTaGGGGAATCCAGCATCCGGT +
Preference number: 5 (lower is better)
Translates to: VPSITPTARVTTDSGGEFEGNLF*GNPASG
Trigger: ACCGGATGCTGGATTCCCCAAGAACAAGTTACCCTC...AAACTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CAA 90 bp AGGGTAACTTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGAGGGTAACTTGTTCTaGGGGAATCCAGCATCCGGT +
Preference number: 5 (lower is better)
Translates to: RVTCSWGIQHPVPSITPTEGNLF*GNPASG
Trigger: ACCGGATGCTGGATTCCCCAAGAACAAGTTACCCTC...CGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAGTTACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CAA 90 bp GCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGAATCCAGCATCCGGAGGGTAACTTGTTCTaGGGGAATCCAGCATCCGGT +
Preference number: 5 (lower is better)
Translates to: AGIASPQRVTCSWGIQHPEGNLF*GNPASG
Trigger: ACCGGATGCTGGATTCCCCAAGAACAAGTTACCCTC...CGGATGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CAA 90 bp GCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGAATCCAGCATCCGACCCCAGAGGGTAACTaGTTCTTGGGGAATCCAGCA +
Preference number: 5 (lower is better)
Translates to: AGIASPQRVTCSWGIQHPTPEGN*FLGNPA
Trigger: TGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGT...CGGATGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CAA 90 bp GGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGACGAGTCTGCAGAGTATaGATCTGCTCAGAAAAGCAC +
Preference number: 5 (lower is better)
Translates to: GNPASGAIHHPYGTCDNRRVCRV*ICSEKH
Trigger: GTGCTTTTCTGAGCAGATCAATACTCTGCAGACTCG...TCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CAA 90 bp TCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACACGAGTCTGCAGAGTATaGATCTGCTCAGAAAAGCAC +
Preference number: 5 (lower is better)
Translates to: SWGIQHPVPSITPTARVTRVCRV*ICSEKH
Trigger: GTGCTTTTCTGAGCAGATCAATACTCTGCAGACTCG...TGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CAA 90 bp CATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGCGAGTCTGCAGAGTATaGATCTGCTCAGAAAAGCAC +
Preference number: 5 (lower is better)
Translates to: HPVPSITPTARVTTDSGGRVCRV*ICSEKH
Trigger: GTGCTTTTCTGAGCAGATCAATACTCTGCAGACTCG...CCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CAA 90 bp TGCCGCCAGTCTAATGCTGTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCAATTTGGGCCTCCCTTaGCTAACTACTTGCAAGAGT +
Preference number: 5 (lower is better)
Translates to: CRQSNAVNGLLGLRGKPPNLGLP*LTTCKS
Trigger: ACTCTTGCAAGTAGTTAGCAAAGGGAGGCCCAAATT...GGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGACAGCATTAGACTGGCGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS CCA 90 bp AACAATGAACACCACGAAGTCTGTCCATGCTCTCCACAAGCACACTaGGGCTCTGGGCATTCCCACGAAGCATCCACGACAAAAGAAGCG +
Preference number: 5 (lower is better)
Translates to: NNEHHEVCPCSPQAH*GSGHSHEASTTKEA
Trigger: CGCTTCTTTTGTCGTGGATGCTTCGTGGGAATGCCCAGAGCCCCAGTGTGCTTGTGGAGAGCATGGACAGACTTCGTGGTGTTCATTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522951.5
CDS-3UTR CAA 90 bp GGAAATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGAGGGTAACTTGTTCTaGGGGAATCCAGCATCCGGT +
Preference number: 5 (lower is better)
Translates to: GNVPARWNSLTPEGNLFLEGNLF*GNPASG
Trigger: ACCGGATGCTGGATTCCCCAAGAACAAGTTACCCTC...CAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CAA 90 bp CCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGCATTCAAAATTAAAGTaGGGCCCTAGTCAGGGTTAC +
Preference number: 5 (lower is better)
Translates to: PVPSITPTARVTTDSGGEHSKLK*GPSQGY
Trigger: GTAACCCTGACTAGGGCCCAACTTTAATTTTGAATG...CTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CAA 90 bp TCTAATGCTGTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTGGTCCCGAGTCTGCAGAGTATaGATCTGCTCAGAAAAGCAC +
Preference number: 5 (lower is better)
Translates to: SNAVNGLLGLRGKPPYWSRVCRV*ICSEKH
Trigger: GTGCTTTTCTGAGCAGATCAATACTCTGCAGACTCG...GGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGACAGCATTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CAA 90 bp CTTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGAACAGCAACTCAGACTaGTGCTGTCACTTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: LVLGESSIRCHPSPLRHVNSNSD*CCHFWK
Trigger: TTTCCAGAAGTGACAGCACAAGTCTGAGTTGCTGTT...CACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp TTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTTCTTTGGCAAGTGGCTaGGCAGCAAATATACCCACT +
Preference number: 5 (lower is better)
Translates to: LFLGNPASGAIHHPYGTCSLASG*AANIPT
Trigger: AGTGGGTATATTTGCTGCCAAGCCACTTGCCAAAGA...ACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp CTTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGGCCATGGAGGAATTaGGCAAGTTTTGGTACAGAA +
Preference number: 5 (lower is better)
Translates to: LVLGESSIRCHPSPLRHVWPWRN*ASFGTE
Trigger: TTCTGTACCAAAACTTGCCAAATTCCTCCATGGCCA...CACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp CTTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGCTTTATTCCAGTCCCTaGAACATCACAGGCTGGTTT +
Preference number: 5 (lower is better)
Translates to: LVLGESSIRCHPSPLRHVLYSSP*NITGWF
Trigger: AAACCAGCCTGTGATGTTCAAGGGACTGGAATAAAG...CACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS TCA 90 bp CCCAGGCAGACTTCTAGTCCATTCCAGTGCTTTTCTCCCTGTGTGTaGCAATGGTCTCAAGTTCCTTCTCAGCAAGCTTCCAGGCAGTCC +
Preference number: 5 (lower is better)
Translates to: PRQTSSPFQCFSPCV*QWSQVPSQQASRQS
Trigger: GGACTGCCTGGAAGCTTGCTGAGAAGGAACTTGAGACCATTGTCACACACAGGGAGAAAAGCACTGGAATGGACTAGAAGTCTGCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522754.1
CDS-3UTR CAA 90 bp GGAAATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGTTGTCCCATCTCCATTaGCATCGAAGGTGCGGAAGA +
Preference number: 5 (lower is better)
Translates to: GNVPARWNSLTPEGNLFLLSHLH*HRRCGR
Trigger: TCTTCCGCACCTTCGATGCAAATGGAGATGGGACAA...CAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CAA 90 bp GGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGAAAACCATCTTATAGATaGCCTGCACGATCTCTAGCA +
Preference number: 5 (lower is better)
Translates to: GNPASGAIHHPYGTCDNRKPSYR*PARSLA
Trigger: TGCTAGAGATCGTGCAGGCAATCTATAAGATGGTTT...TCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CAA 90 bp GGTAACTTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCTTCAGGTGGGGAGTTTaGTCTTTCAAACAAAAGCCC +
Preference number: 5 (lower is better)
Translates to: GNLFLGNPASGAIHHPYGFRWGV*SFKQKP
Trigger: GGGCTTTTGTTTGAAAGACAAAACTCCCCACCTGAA...GCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAGTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CAA 90 bp CTTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGCATTCAAAATTAAAGTaGGGCCCTAGTCAGGGTTAC +
Preference number: 5 (lower is better)
Translates to: LVLGESSIRCHPSPLRHVHSKLK*GPSQGY
Trigger: GTAACCCTGACTAGGGCCCAACTTTAATTTTGAATG...CACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CAA 90 bp GTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGTTTCCCTTTGCTAACTACTaGCAAGAGTATGACTCGCCT +
Preference number: 5 (lower is better)
Translates to: VPSITPTARVTTDSGGEFPFANY*QEYDSP
Trigger: AGGCGAGTCATACTCTTGCAAGTAGTTAGCAAAGGG...AAACTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp TCTAATGCTGTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTGGTCCAACAACCTTGAGAATTaGGGCCTCCCTTTGCTAACT +
Preference number: 5 (lower is better)
Translates to: SNAVNGLLGLRGKPPYWSNNLEN*GLPLLT
Trigger: AGTTAGCAAAGGGAGGCCCAAATTCTCAAGGTTGTT...GGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGACAGCATTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp TTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGGAATTTGGCAAGTTTaGGTACAGAACCACTGTGAG +
Preference number: 5 (lower is better)
Translates to: LFLGNPASGAIHHPYGTCGIWQV*VQNHCE
Trigger: CTCACAGTGGTTCTGTACCAAAACTTGCCAAATTCC...ACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp TCTAATGCTGTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTGGTCCGGAATTTGGCAAGTTTaGGTACAGAACCACTGTGAG +
Preference number: 5 (lower is better)
Translates to: SNAVNGLLGLRGKPPYWSGIWQV*VQNHCE
Trigger: CTCACAGTGGTTCTGTACCAAAACTTGCCAAATTCC...GGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGACAGCATTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp GGAAATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGAGCCTTGGAAGGCAGTaGAAAAGCTTCTCAGGTGGT +
Preference number: 5 (lower is better)
Translates to: GNVPARWNSLTPEGNLFLSLGRQ*KSFSGG
Trigger: ACCACCTGAGAAGCTTTTCAACTGCCTTCCAAGGCT...CAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395923.5
CDS-3UTR CAA 90 bp GCTCTGGGCATTCCCACGAAGCATCCACGACAAAAGAAGCTGAAGGCGTCACGGAAACCATCTTATAGATaGCCTGCACGATCTCTAGCA +
Preference number: 5 (lower is better)
Translates to: ALGIPTKHPRQKKLKASRKPSYR*PARSLA
Trigger: TGCTAGAGATCGTGCAGGCAATCTATAAGATGGTTT...CCGTGACGCCTTCAGCTTCTTTTGTCGTGGATGCTTCGTGGGAATGCCCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CAA 90 bp TTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTAAACCATCTTATAGATaGCCTGCACGATCTCTAGCA +
Preference number: 5 (lower is better)
Translates to: LFLGNPASGAIHHPYGTCKPSYR*PARSLA
Trigger: TGCTAGAGATCGTGCAGGCAATCTATAAGATGGTTT...ACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CAA 90 bp TCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACATCAAACAAAAGCCCCTaGAAGCTTGCAATAGAATCA +
Preference number: 5 (lower is better)
Translates to: SWGIQHPVPSITPTARVTSNKSP*KLAIES
Trigger: TGATTCTATTGCAAGCTTCAAGGGGCTTTTGTTTGA...TGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CAA 90 bp GTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGTTTTTCAGGTGGGGAGTTTaGTCTTTCAAACAAAAGCCC +
Preference number: 5 (lower is better)
Translates to: VPSITPTARVTTDSGGEFFRWGV*SFKQKP
Trigger: GGGCTTTTGTTTGAAAGACAAAACTCCCCACCTGAA...AAACTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CAA 90 bp CCGGTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGAAGATGGGTCTGGTTTaGGAATATGTTACCATTTGT +
Preference number: 5 (lower is better)
Translates to: PVPSITPTARVTTDSGGEKMGLV*EYVTIC
Trigger: ACAAATGGTAACATATTCCAAAACCAGACCCATCTT...CTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCACCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CAA 90 bp TTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTCATTCAAAATTAAAGTaGGGCCCTAGTCAGGGTTAC +
Preference number: 5 (lower is better)
Translates to: LFLGNPASGAIHHPYGTCHSKLK*GPSQGY
Trigger: GTAACCCTGACTAGGGCCCAACTTTAATTTTGAATG...ACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CAA 90 bp GCTCTGGGCATTCCCACGAAGCATCCACGACAAAAGAAGCTGAAGGCGTCACGGGTCTTTATGATGAATTaGATGACTGCCCAACCTCTG +
Preference number: 5 (lower is better)
Translates to: ALGIPTKHPRQKKLKASRVFMMN*MTAQPL
Trigger: CAGAGGTTGGGCAGTCATCAAATTCATCATAAAGAC...CCGTGACGCCTTCAGCTTCTTTTGTCGTGGATGCTTCGTGGGAATGCCCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000521599.5
CDS-3UTR CAA 90 bp TGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGAATCCAGCATCCGGTTCTTTGGCAAGTGGCTaGGCAGCAAATATACCCACT +
Preference number: 5 (lower is better)
Translates to: WNSLTPEGNLFLGNPASGSLASG*AANIPT
Trigger: AGTGGGTATATTTGCTGCCAAGCCACTTGCCAAAGA...ACCGGATGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp TCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACATTTCACCCTATGGATTaGGTTCTTTTTGGTCTACCA +
Preference number: 5 (lower is better)
Translates to: SWGIQHPVPSITPTARVTFHPMD*VLFGLP
Trigger: TGGTAGACCAAAAAGAACCAAATCCATAGGGTGAAA...TGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp GTGCCATCCATCACCCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGTTTTGGCCATGGAGGAATTaGGCAAGTTTTGGTACAGAA +
Preference number: 5 (lower is better)
Translates to: VPSITPTARVTTDSGGEFWPWRN*ASFGTE
Trigger: TTCTGTACCAAAACTTGCCAAATTCCTCCATGGCCA...AAACTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGGGTGATGGATGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp GAAGCTTGCAATAGAATCACAGGACTGGATGGGTTTCCCTTCTTTTGCCCCAACGTGCTGTGGAGTCCCTaGGCCAAACTTGAGTGCACT +
Preference number: 5 (lower is better)
Translates to: EACNRITGLDGFPFFCPNVLWSP*AKLECT
Trigger: AGTGCACTCAAGTTTGGCCAAGGGACTCCACAGCAC...GTTGGGGCAAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTATTGCAAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS TCA 90 bp GAGAAAGGAAAGCAGCTGAGGGGAGTCGCCTCCAAATGGGAAAGGTaGGAGCAGAAAAAGACACTGAAGCTTCACCTGAGCTGCTTTACA +
Preference number: 5 (lower is better)
Translates to: EKGKQLRGVASKWER*EQKKTLKLHLSCFT
Trigger: TGTAAAGCAGCTCAGGTGAAGCTTCAGTGTCTTTTTCTGCTCTCACCTTTCCCATTTGGAGGCGACTCCCCTCAGCTGCTTTCCTTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522754.1
CDS GCA 90 bp CTGGGGCAGTCTCTCAAGAAGCCTTTATACCATTCCTGGATCTCATaGTCTGTAAAGTCTGTGCTTTCCAGCAAGTCCTGCATGACCTCC +
Preference number: 5 (lower is better)
Translates to: LGQSLKKPLYHSWIS*SVKSVLSSKSCMTS
Trigger: GGAGGTCATGCAGGACTTGCTGGAAAGCACAGACTTTACAGAGCATGAGATCCAGGAATGGTATAAAGGCTTCTTGAGAGACTGCCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 21 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000517531.5
ENST00000517822.5
ENST00000518166.5
ENST00000518661.5
ENST00000518727.5
ENST00000519098.5
ENST00000519508.6
ENST00000520346.1
ENST00000520425.5
ENST00000520690.5
ENST00000521599.5
ENST00000521964.5
ENST00000522206.5
ENST00000522252.5
ENST00000522448.5
ENST00000522951.5
ENST00000523923.5
ENST00000524209.5
CDS GCA 90 bp TTCCTTCTCAGCAAGCTTCCAGGCAGTCCTGAGATGGAAACCACCTaGCATCAGAGCTCTGAATTATTATGCATCCTCAGGCCTGAGCTA +
Preference number: 5 (lower is better)
Translates to: FLLSKLPGSPEMETT*HQSSELLCILRPEL
Trigger: TAGCTCAGGCCTGAGGATGCATAATAATTCAGAGCTCTGATGGCAGGTGGTTTCCATCTCAGGACTGCCTGGAAGCTTGCTGAGAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522754.1
CDS-3UTR CAA 90 bp AAATACAGACAGGGTCAGTGGCAGGCCAGGACAGGGACTATTTCTATACATTCTTGGGTTTCCCTTCTTTaGCCCCAACCCCCGAGTCTT +
Preference number: 5 (lower is better)
Translates to: KYRQGQWQARTGTISIHSWVSLL*PQPPSL
Trigger: AAGACTCGGGGGTTGGGGCAAAAGAAGGGAAACCCA...AGAATGTATAGAAATAGTCCCTGTCCTGGCCTGCCACTGACCCTGTCTGTATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp TGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGAATCCAGCATCCGGTTTCAGGTGGGGAGTTTaGTCTTTCAAACAAAAGCCC +
Preference number: 5 (lower is better)
Translates to: WNSLTPEGNLFLGNPASGFRWGV*SFKQKP
Trigger: GGGCTTTTGTTTGAAAGACAAAACTCCCCACCTGAA...ACCGGATGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CAA 90 bp CCCTACGGCACGTGTGACAACAGATTCAGGTGGGGAGTTTTGTCTTTCAAACAAACCCCAGAGGGTAACTaGTTCTTGGGGAATCCAGCA +
Preference number: 5 (lower is better)
Translates to: PYGTCDNRFRWGVLSFKQTPEGN*FLGNPA
Trigger: TGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGT...TTGTTTGAAAGACAAAACTCCCCACCTGAATCTGTTGTCACACGTGCCGTAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CAA 90 bp TCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGGCACGTGTGACAAAGATGGGTCTGGTTTaGGAATATGTTACCATTTGT +
Preference number: 5 (lower is better)
Translates to: SWGIQHPVPSITPTARVTKMGLV*EYVTIC
Trigger: ACAAATGGTAACATATTCCAAAACCAGACCCATCTT...TGTCACACGTGCCGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CAA 90 bp GTCAATGGGCTGCTGGGCCTGAGAGGGAAACCACCCTACTGGTCCCCTGTCATAGGCAAAACACTTAATTaGGTCTGCATTACCCAATAT +
Preference number: 5 (lower is better)
Translates to: VNGLLGLRGKPPYWSPVIGKTLN*VCITQY
Trigger: ATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCC...TATGACAGGGGACCAGTAGGGTGGTTTCCCTCTCAGGCCCAGCAGCCCATTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CAA 90 bp GCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGAATCCAGCATCCGGTCTTTATGATGAATTaGATGACTGCCCAACCTCTG +
Preference number: 5 (lower is better)
Translates to: AGIASPQRVTCSWGIQHPVFMMN*MTAQPL
Trigger: CAGAGGTTGGGCAGTCATCAAATTCATCATAAAGAC...CGGATGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000521599.5
CDS-3UTR CAA 90 bp TTCTGGGTGCTGTGGAGTCCCTTGGCCAAACTTGAGTGCACTGGATTCGACATACCCTTTGCTAACTACTaGCAAGAGTATGACTCGCCT +
Preference number: 5 (lower is better)
Translates to: FWVLWSPLAKLECTGFDIPFANY*QEYDSP
Trigger: AGGCGAGTCATACTCTTGCAAGTAGTTAGCAAAGGG...TATGTCGAATCCAGTGCACTCAAGTTTGGCCAAGGGACTCCACAGCACCCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp TGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGAATCCAGCATCCGGTAACAACCTTGAGAATTaGGGCCTCCCTTTGCTAACT +
Preference number: 5 (lower is better)
Translates to: WNSLTPEGNLFLGNPASGNNLEN*GLPLLT
Trigger: AGTTAGCAAAGGGAGGCCCAAATTCTCAAGGTTGTT...ACCGGATGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp GAAGCTTGCAATAGAATCACAGGACTGGATGGGTTTCCCTTCTTTTGCCCCAACTGTGGTTCCTCTTCTTaGGCAAGTGGCTTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: EACNRITGLDGFPFFCPNCGSSS*ASGLAA
Trigger: TGCTGCCAAGCCACTTGCCAAAGAAGAGGAACCACA...GTTGGGGCAAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTATTGCAAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp GCTCTGGGCATTCCCACGAAGCATCCACGACAAAAGAAGCTGAAGGCGTCACGGACAGGCTGGTTTTATTaGGGACAGAACAGGTTTTAT +
Preference number: 5 (lower is better)
Translates to: ALGIPTKHPRQKKLKASRTGWFY*GQNRFY
Trigger: ATAAAACCTGTTCTGTCCCAAATAAAACCAGCCTGT...CCGTGACGCCTTCAGCTTCTTTTGTCGTGGATGCTTCGTGGGAATGCCCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp GGAAATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGAAACCATCTTATAGATaGCCTGCACGATCTCTAGCA +
Preference number: 5 (lower is better)
Translates to: GNVPARWNSLTPEGNLFLKPSYR*PARSLA
Trigger: TGCTAGAGATCGTGCAGGCAATCTATAAGATGGTTT...CAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CAA 90 bp GAAGCTTGCAATAGAATCACAGGACTGGATGGGTTTCCCTTCTTTTGCCCCAACAGTTTTCCGTCTCTATaGGTGTCCATCTGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: EACNRITGLDGFPFFCPNSFPSL*VSIWRK
Trigger: CTTCCGCCAGATGGACACCAATAGAGACGGAAAACT...GTTGGGGCAAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTATTGCAAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CAA 90 bp TCTGCATTCAAAGAGCACGGCAATGGAAAATACTTTTGGATTCTCCATAGGGGGTGGGTTTCCCTTCTTTaGCCCCAACCCCCGAGTCTT +
Preference number: 5 (lower is better)
Translates to: SAFKEHGNGKYFWILHRGWVSLL*PQPPSL
Trigger: AAGACTCGGGGGTTGGGGCAAAAGAAGGGAAACCCA...CCCCCTATGGAGAATCCAAAAGTATTTTCCATTGCCGTGCTCTTTGAATGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp ATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGATCAAACAAAAGCCCCTaGAAGCTTGCAATAGAATCA +
Preference number: 5 (lower is better)
Translates to: MSQLAGIASPQRVTCSWGSNKSP*KLAIES
Trigger: TGATTCTATTGCAAGCTTCAAGGGGCTTTTGTTTGA...TCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CAA 90 bp AAATACAGACAGGGTCAGTGGCAGGCCAGGACAGGGACTATTTCTATACATTCTACCCCAGAGGGTAACTaGTTCTTGGGGAATCCAGCA +
Preference number: 5 (lower is better)
Translates to: KYRQGQWQARTGTISIHSTPEGN*FLGNPA
Trigger: TGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGT...AGAATGTATAGAAATAGTCCCTGTCCTGGCCTGCCACTGACCCTGTCTGTATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp GCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGAATCCAGCATCCGTGTCGATTGGTACATTaGTGCAAAGACAGATATGAC +
Preference number: 5 (lower is better)
Translates to: AGIASPQRVTCSWGIQHPCRLVH*CKDRYD
Trigger: GTCATATCTGTCTTTGCACAAATGTACCAATCGACA...CGGATGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CAA 90 bp GGAAATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGTCTTTATGATGAATTaGATGACTGCCCAACCTCTG +
Preference number: 5 (lower is better)
Translates to: GNVPARWNSLTPEGNLFLVFMMN*MTAQPL
Trigger: CAGAGGTTGGGCAGTCATCAAATTCATCATAAAGAC...CAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000521599.5
CDS-3UTR CAA 90 bp GAGGGAAACCACCCTACTGGTCCCCTGTCATACATGTTAACATTCCTGTGCTCCAACAGCAACTCAGACTaGTGCTGTCACTTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: EGNHPTGPLSYMLTFLCSNSNSD*CCHFWK
Trigger: TTTCCAGAAGTGACAGCACAAGTCTGAGTTGCTGTT...GGAGCACAGGAATGTTAACATGTATGACAGGGGACCAGTAGGGTGGTTTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS TCA 90 bp AGAGAGGCAAGTGGATGCCTATCATGGACCCTTGAGAGTCCACAATaGCTCCTCAAGGATGACAGACATGTAACACTCTGTAAGTGCATG +
Preference number: 5 (lower is better)
Translates to: REASGCLSWTLESPQ*LLKDDRHVTLCKCM
Trigger: CATGCACTTACAGAGTGTTACATGTCTGTCATCCTTGAGGAGTCATTGTGGACTCTCAAGGGTCCATGATAGGCATCCACTTGCCTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522754.1
CDS GCA 90 bp AGAGTTCTTTTTCTTCTGGAATCCCTGACACTGATGGGAACAGATTaGTCACAAATGAGGCCGGCTGTTCACCAGCTGCAGAATGTCTCT +
Preference number: 5 (lower is better)
Translates to: RVLFLLESLTLMGTD*SQMRPAVHQLQNVS
Trigger: AGAGACATTCTGCAGCTGGTGAACAGCCGGCCTCATTTGTGAGCAATCTGTTCCCATCAGTGTCAGGGATTCCAGAAGAAAAAGAACTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521957.1
CDS CCA 90 bp CGCACCACCATATCTCATTTAAAGAAAGAGAGAGTTCAGCATGGCTaGGGAGGCCTCAGGAAACTTACAATCATGGTAGAAGGGGAAGCA +
Preference number: 5 (lower is better)
Translates to: RTTISHLKKERVQHG*GGLRKLTIMVEGEA
Trigger: TGCTTCCCCTTCTACCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGCTGAACTCTCTCTTTCTTTAAATGAGATATGGTGGTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518952.5
CDS CCA 90 bp CCCATCCTGGCGGCAAGAATTCAGTTTCTGACTGTCAGCAACGAGTaGTCCCAGGAGACCAAAGTTGAGATAATCTGTGTCTTTTGTTCA +
Preference number: 5 (lower is better)
Translates to: PILAARIQFLTVSNE*SQETKVEIICVFCS
Trigger: TGAACAAAAGACACAGATTATCTCAACTTTGGTCTCCTGGGACCACTCGTTGCTGACAGTCAGAAACTGAATTCTTGCCGCCAGGATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520425.5
CDS-3UTR CAA 90 bp GCTGTCACTTCTGGAAATAGAAGTCTGCATTCAAAGAGCACGGCAATGGAAAATAGCTCTACAATTCGATaGGTGGGCGCAGGGCTCAGA +
Preference number: 5 (lower is better)
Translates to: AVTSGNRSLHSKSTAMENSSTIR*VGAGLR
Trigger: TCTGAGCCCTGCGCCCACCAATCGAATTGTAGAGCT...ATTTTCCATTGCCGTGCTCTTTGAATGCAGACTTCTATTTCCAGAAGTGACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp AGGGTAACTTGTTCTTGGGGAATCCAGCATCCGGTGCCATCCATCACCCCTACGAAGATGGGTCTGGTTTaGGAATATGTTACCATTTGT +
Preference number: 5 (lower is better)
Translates to: RVTCSWGIQHPVPSITPTKMGLV*EYVTIC
Trigger: ACAAATGGTAACATATTCCAAAACCAGACCCATCTT...CGTAGGGGTGATGGATGGCACCGGATGCTGGATTCCCCAAGAACAAGTTACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CAA 90 bp ATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGAGGCAAAACACTTAATTaGGTCTGCATTACCCAATAT +
Preference number: 5 (lower is better)
Translates to: MSQLAGIASPQRVTCSWGGKTLN*VCITQY
Trigger: ATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCC...TCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CAA 90 bp TGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGAATCCAGCATCCGGTTGTCGATTGGTACATTaGTGCAAAGACAGATATGAC +
Preference number: 5 (lower is better)
Translates to: WNSLTPEGNLFLGNPASGCRLVH*CKDRYD
Trigger: GTCATATCTGTCTTTGCACAAATGTACCAATCGACA...ACCGGATGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CAA 90 bp GGAAATGTCCCAGCTCGCTGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGTGTCGATTGGTACATTaGTGCAAAGACAGATATGAC +
Preference number: 5 (lower is better)
Translates to: GNVPARWNSLTPEGNLFLCRLVH*CKDRYD
Trigger: GTCATATCTGTCTTTGCACAAATGTACCAATCGACA...CAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCAGCGAGCTGGGACATTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CAA 90 bp AGTGACATAAACCTTGAGGCATGCAGTCTTCTGGGTGCTGTGGAGTCCCTTGGCACAGGCTGGTTTTATTaGGGACAGAACAGGTTTTAT +
Preference number: 5 (lower is better)
Translates to: SDINLEACSLLGAVESLGTGWFY*GQNRFY
Trigger: ATAAAACCTGTTCTGTCCCAAATAAAACCAGCCTGT...GCCAAGGGACTCCACAGCACCCAGAAGACTGCATGCCTCAAGGTTTATGTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS CCA 90 bp CCCATCCTGGCGGCAAGAATTCAGTTTCTGACTGTCAGCAACGAGTaGTCCCAGGAGACCAAAGTTGAGATAATAGCTTTATTTCTTCGT +
Preference number: 5 (lower is better)
Translates to: PILAARIQFLTVSNE*SQETKVEIIALFLR
Trigger: ACGAAGAAATAAAGCTATTATCTCAACTTTGGTCTCCTGGGACCACTCGTTGCTGACAGTCAGAAACTGAATTCTTGCCGCCAGGATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520690.5
CDS-3UTR CAA 90 bp TGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGAATCCAGCATCCGGTAAGATGGGTCTGGTTTaGGAATATGTTACCATTTGT +
Preference number: 5 (lower is better)
Translates to: WNSLTPEGNLFLGNPASGKMGLV*EYVTIC
Trigger: ACAAATGGTAACATATTCCAAAACCAGACCCATCTT...ACCGGATGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CAA 90 bp GGGTCAGTGGCAGGCCAGGACAGGGACTATTTCTATACATTCTGGAAGTGTCGGGGCAAAACACTTAATTaGGTCTGCATTACCCAATAT +
Preference number: 5 (lower is better)
Translates to: GSVAGQDRDYFYTFWKCRGKTLN*VCITQY
Trigger: ATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCC...CCGACACTTCCAGAATGTATAGAAATAGTCCCTGTCCTGGCCTGCCACTGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp TGGAATAGCCTCACCCCAGAGGGTAACTTGTTCTTGGGGAATCCAGCATCCGGTGGCAAAACACTTAATTaGGTCTGCATTACCCAATAT +
Preference number: 5 (lower is better)
Translates to: WNSLTPEGNLFLGNPASGGKTLN*VCITQY
Trigger: ATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCC...ACCGGATGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGTGAGGCTATTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CAA 90 bp GAAGCTTGCAATAGAATCACAGGACTGGATGGGTTTCCCTTCTTTTGCCCCAACAACAGCAACTCAGACTaGTGCTGTCACTTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: EACNRITGLDGFPFFCPNNSNSD*CCHFWK
Trigger: TTTCCAGAAGTGACAGCACAAGTCTGAGTTGCTGTT...GTTGGGGCAAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTATTGCAAGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp AAATACAGACAGGGTCAGTGGCAGGCCAGGACAGGGACTATTTCTATACATTCTCCCTTTGCTAACTACTaGCAAGAGTATGACTCGCCT +
Preference number: 5 (lower is better)
Translates to: KYRQGQWQARTGTISIHSPFANY*QEYDSP
Trigger: AGGCGAGTCATACTCTTGCAAGTAGTTAGCAAAGGG...AGAATGTATAGAAATAGTCCCTGTCCTGGCCTGCCACTGACCCTGTCTGTATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp CCCCTTGAAGCTTGCAATAGAATCACAGGACTGGATGGGTTTCCCTTCTTTTGCAATTTGGGCCTCCCTTaGCTAACTACTTGCAAGAGT +
Preference number: 5 (lower is better)
Translates to: PLEACNRITGLDGFPFFCNLGLP*LTTCKS
Trigger: ACTCTTGCAAGTAGTTAGCAAAGGGAGGCCCAAATT...GCAAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTATTGCAAGCTTCAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp GCTGTCACTTCTGGAAATAGAAGTCTGCATTCAAAGAGCACGGCAATGGAAAATGTCCCTTGGCCAAACTaGAGTGCACTGGATTCGACA +
Preference number: 5 (lower is better)
Translates to: AVTSGNRSLHSKSTAMENVPWPN*SALDST
Trigger: TGTCGAATCCAGTGCACTCAAGTTTGGCCAAGGGAC...ATTTTCCATTGCCGTGCTCTTTGAATGCAGACTTCTATTTCCAGAAGTGACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp GAAGCTTGCAATAGAATCACAGGACTGGATGGGTTTCCCTTCTTTTGCCCCAACCTTTATTCCAGTCCCTaGAACATCACAGGCTGGTTT +
Preference number: 5 (lower is better)
Translates to: EACNRITGLDGFPFFCPNLYSSP*NITGWF
Trigger: AAACCAGCCTGTGATGTTCAAGGGACTGGAATAAAG...GTTGGGGCAAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTATTGCAAGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS CCA 90 bp ATTACGCACCACCATATCTCATTTAAAGAAAGAGAGAGTTCAGCATaGCTGGGGAGGCCTCAGGAAACTTACAATCATGGTAGAAGGGGA +
Preference number: 5 (lower is better)
Translates to: ITHHHISFKERESSA*LGRPQETYNHGRRG
Trigger: TCCCCTTCTACCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGCTGAACTCTCTCTTTCTTTAAATGAGATATGGTGGTGCGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518952.5
CDS-3UTR CAA 90 bp TCATCAAACAATGAACACCACGAAGTCTGTCCATGCTCTCCACAAGCACACTGGAAACCATCTTATAGATaGCCTGCACGATCTCTAGCA +
Preference number: 5 (lower is better)
Translates to: SSNNEHHEVCPCSPQAHWKPSYR*PARSLA
Trigger: TGCTAGAGATCGTGCAGGCAATCTATAAGATGGTTT...CCAGTGTGCTTGTGGAGAGCATGGACAGACTTCGTGGTGTTCATTGTTTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CAA 90 bp TGTCGATTGGTACATTTGTGCAAAGACAGATATGACTTCCAAACAAGACAGACAAGCTCTACAATTCGATaGGTGGGCGCAGGGCTCAGA +
Preference number: 5 (lower is better)
Translates to: CRLVHLCKDRYDFQTRQTSSTIR*VGAGLR
Trigger: TCTGAGCCCTGCGCCCACCAATCGAATTGTAGAGCT...TGTCTGTCTTGTTTGGAAGTCATATCTGTCTTTGCACAAATGTACCAATCGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CAA 90 bp AACTACTTGCAAGAGTATGACTCGCCTGTAACCAGCAAATTTTTACTCTTAGCTTGGGTTTCCCTTCTTTaGCCCCAACCCCCGAGTCTT +
Preference number: 5 (lower is better)
Translates to: NYLQEYDSPVTSKFLLLAWVSLL*PQPPSL
Trigger: AAGACTCGGGGGTTGGGGCAAAAGAAGGGAAACCCA...AGCTAAGAGTAAAAATTTGCTGGTTACAGGCGAGTCATACTCTTGCAAGTAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp TCATCAAACAATGAACACCACGAAGTCTGTCCATGCTCTCCACAAGCACACTGGGTCTTTATGATGAATTaGATGACTGCCCAACCTCTG +
Preference number: 5 (lower is better)
Translates to: SSNNEHHEVCPCSPQAHWVFMMN*MTAQPL
Trigger: CAGAGGTTGGGCAGTCATCAAATTCATCATAAAGAC...CCAGTGTGCTTGTGGAGAGCATGGACAGACTTCGTGGTGTTCATTGTTTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000521599.5
CDS-3UTR CAA 90 bp GACAGGGACTATTTCTATACATTCTGGAAGTGTCGGCATTCATCAGCCTGCATGAATTTGGGCCTCCCTTaGCTAACTACTTGCAAGAGT +
Preference number: 5 (lower is better)
Translates to: DRDYFYTFWKCRHSSACMNLGLP*LTTCKS
Trigger: ACTCTTGCAAGTAGTTAGCAAAGGGAGGCCCAAATT...CATGCAGGCTGATGAATGCCGACACTTCCAGAATGTATAGAAATAGTCCCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp GACAGGGACTATTTCTATACATTCTGGAAGTGTCGGCATTCATCAGCCTGCATGTGGCCATGGAGGAATTaGGCAAGTTTTGGTACAGAA +
Preference number: 5 (lower is better)
Translates to: DRDYFYTFWKCRHSSACMWPWRN*ASFGTE
Trigger: TTCTGTACCAAAACTTGCCAAATTCCTCCATGGCCA...CATGCAGGCTGATGAATGCCGACACTTCCAGAATGTATAGAAATAGTCCCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS TCA 90 bp TCTGTATTTTTAATAAGCTCCGGTGTGATGCTGATGCTGCTGTTCTaGAGACGCTGCTTTGAAAAGCAAGGTTCCCACTTTGAGGAGCAA +
Preference number: 5 (lower is better)
Translates to: SVFLISSGVMLMLLF*RRCFEKQGSHFEEQ
Trigger: TTGCTCCTCAAAGTGGGAACCTTGCTTTTCAAAGCAGCGTCTTCAGAACAGCAGCATCAGCATCACACCGGAGCTTATTAAAAATACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522754.1
CDS-3UTR CAA 90 bp CAAGGCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTTGGGTTTCCCTTCTTTaGCCCCAACCCCCGAGTCTT +
Preference number: 5 (lower is better)
Translates to: QGKTLNLVCITQYVIYSRWVSLL*PQPPSL
Trigger: AAGACTCGGGGGTTGGGGCAAAAGAAGGGAAACCCA...ACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CAA 90 bp TCATCAAACAATGAACACCACGAAGTCTGTCCATGCTCTCCACAAGCACACTGGTCAAACAAAAGCCCCTaGAAGCTTGCAATAGAATCA +
Preference number: 5 (lower is better)
Translates to: SSNNEHHEVCPCSPQAHWSNKSP*KLAIES
Trigger: TGATTCTATTGCAAGCTTCAAGGGGCTTTTGTTTGA...CCAGTGTGCTTGTGGAGAGCATGGACAGACTTCGTGGTGTTCATTGTTTGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CAA 90 bp TGTCGATTGGTACATTTGTGCAAAGACAGATATGACTTCCAAACAAGACAGACAGAGGGTAACTTGTTCTaGGGGAATCCAGCATCCGGT +
Preference number: 5 (lower is better)
Translates to: CRLVHLCKDRYDFQTRQTEGNLF*GNPASG
Trigger: ACCGGATGCTGGATTCCCCAAGAACAAGTTACCCTC...TGTCTGTCTTGTTTGGAAGTCATATCTGTCTTTGCACAAATGTACCAATCGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CAA 90 bp TGTCGATTGGTACATTTGTGCAAAGACAGATATGACTTCCAAACAAGACAGACATGTGGTTCCTCTTCTTaGGCAAGTGGCTTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: CRLVHLCKDRYDFQTRQTCGSSS*ASGLAA
Trigger: TGCTGCCAAGCCACTTGCCAAAGAAGAGGAACCACA...TGTCTGTCTTGTTTGGAAGTCATATCTGTCTTTGCACAAATGTACCAATCGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp GAAGCTTGCAATAGAATCACAGGACTGGATGGGTTTCCCTTCTTTTGCCCCAACTTTCACCCTATGGATTaGGTTCTTTTTGGTCTACCA +
Preference number: 5 (lower is better)
Translates to: EACNRITGLDGFPFFCPNFHPMD*VLFGLP
Trigger: TGGTAGACCAAAAAGAACCAAATCCATAGGGTGAAA...GTTGGGGCAAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTATTGCAAGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp TGTCGATTGGTACATTTGTGCAAAGACAGATATGACTTCCAAACAAGACAGACATTGTCCCATCTCCATTaGCATCGAAGGTGCGGAAGA +
Preference number: 5 (lower is better)
Translates to: CRLVHLCKDRYDFQTRQTLSHLH*HRRCGR
Trigger: TCTTCCGCACCTTCGATGCAAATGGAGATGGGACAA...TGTCTGTCTTGTTTGGAAGTCATATCTGTCTTTGCACAAATGTACCAATCGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CAA 90 bp CAAGGCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTGAGGGTAACTTGTTCTaGGGGAATCCAGCATCCGGT +
Preference number: 5 (lower is better)
Translates to: QGKTLNLVCITQYVIYSREGNLF*GNPASG
Trigger: ACCGGATGCTGGATTCCCCAAGAACAAGTTACCCTC...ACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CAA 90 bp CTGGAAATGCATTCAAAATTAAAGTTGGGCCCTAGTCAGGGTTACTTTGTATTTACCCCAGAGGGTAACTaGTTCTTGGGGAATCCAGCA +
Preference number: 5 (lower is better)
Translates to: LEMHSKLKLGPSQGYFVFTPEGN*FLGNPA
Trigger: TGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGT...AAATACAAAGTAACCCTGACTAGGGCCCAACTTTAATTTTGAATGCATTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CAA 90 bp CCCCTTGAAGCTTGCAATAGAATCACAGGACTGGATGGGTTTCCCTTCTTTTGCAAGATGGGTCTGGTTTaGGAATATGTTACCATTTGT +
Preference number: 5 (lower is better)
Translates to: PLEACNRITGLDGFPFFCKMGLV*EYVTIC
Trigger: ACAAATGGTAACATATTCCAAAACCAGACCCATCTT...GCAAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTATTGCAAGCTTCAAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CAA 90 bp TCTGCATTCAAAGAGCACGGCAATGGAAAATACTTTTGGATTCTCCATAGGGGGCATTCAAAATTAAAGTaGGGCCCTAGTCAGGGTTAC +
Preference number: 5 (lower is better)
Translates to: SAFKEHGNGKYFWILHRGHSKLK*GPSQGY
Trigger: GTAACCCTGACTAGGGCCCAACTTTAATTTTGAATG...CCCCCTATGGAGAATCCAAAAGTATTTTCCATTGCCGTGCTCTTTGAATGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp GAAGCTTGCAATAGAATCACAGGACTGGATGGGTTTCCCTTCTTTTGCCCCAACGTCTACCATACAAATTaGGATTTCTGCTGCCAATTA +
Preference number: 5 (lower is better)
Translates to: EACNRITGLDGFPFFCPNVYHTN*DFCCQL
Trigger: TAATTGGCAGCAGAAATCCAAATTTGTATGGTAGAC...GTTGGGGCAAAAGAAGGGAAACCCATCCAGTCCTGTGATTCTATTGCAAGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp CTGGAAATGCATTCAAAATTAAAGTTGGGCCCTAGTCAGGGTTACTTTGTATTTTTGTCCCATCTCCATTaGCATCGAAGGTGCGGAAGA +
Preference number: 5 (lower is better)
Translates to: LEMHSKLKLGPSQGYFVFLSHLH*HRRCGR
Trigger: TCTTCCGCACCTTCGATGCAAATGGAGATGGGACAA...AAATACAAAGTAACCCTGACTAGGGCCCAACTTTAATTTTGAATGCATTTCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CAA 90 bp GGCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTCTTAGTTTTCCGTCTCTATaGGTGTCCATCTGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: GKTLNLVCITQYVIYSRLSFPSL*VSIWRK
Trigger: CTTCCGCCAGATGGACACCAATAGAGACGGAAAACT...AAGACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CAA 90 bp ACGATTAAAAATCATCAAACAATGAACACCACGAAGTCTGTCCATGCTCTCCACTTCAGGTGGGGAGTTTaGTCTTTCAAACAAAAGCCC +
Preference number: 5 (lower is better)
Translates to: TIKNHQTMNTTKSVHALHFRWGV*SFKQKP
Trigger: GGGCTTTTGTTTGAAAGACAAAACTCCCCACCTGAA...GTGGAGAGCATGGACAGACTTCGTGGTGTTCATTGTTTGATGATTTTTAATCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CAA 90 bp GACAGGGACTATTTCTATACATTCTGGAAGTGTCGGCATTCATCAGCCTGCATGAAGATGGGTCTGGTTTaGGAATATGTTACCATTTGT +
Preference number: 5 (lower is better)
Translates to: DRDYFYTFWKCRHSSACMKMGLV*EYVTIC
Trigger: ACAAATGGTAACATATTCCAAAACCAGACCCATCTT...CATGCAGGCTGATGAATGCCGACACTTCCAGAATGTATAGAAATAGTCCCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp ACGATTAAAAATCATCAAACAATGAACACCACGAAGTCTGTCCATGCTCTCCACAACAACCTTGAGAATTaGGGCCTCCCTTTGCTAACT +
Preference number: 5 (lower is better)
Translates to: TIKNHQTMNTTKSVHALHNNLEN*GLPLLT
Trigger: AGTTAGCAAAGGGAGGCCCAAATTCTCAAGGTTGTT...GTGGAGAGCATGGACAGACTTCGTGGTGTTCATTGTTTGATGATTTTTAATCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp AACTACTTGCAAGAGTATGACTCGCCTGTAACCAGCAAATTTTTACTCTTAGCTTCTTTGGCAAGTGGCTaGGCAGCAAATATACCCACT +
Preference number: 5 (lower is better)
Translates to: NYLQEYDSPVTSKFLLLASLASG*AANIPT
Trigger: AGTGGGTATATTTGCTGCCAAGCCACTTGCCAAAGA...AGCTAAGAGTAAAAATTTGCTGGTTACAGGCGAGTCATACTCTTGCAAGTAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp ACGATTAAAAATCATCAAACAATGAACACCACGAAGTCTGTCCATGCTCTCCACCTTTATTCCAGTCCCTaGAACATCACAGGCTGGTTT +
Preference number: 5 (lower is better)
Translates to: TIKNHQTMNTTKSVHALHLYSSP*NITGWF
Trigger: AAACCAGCCTGTGATGTTCAAGGGACTGGAATAAAG...GTGGAGAGCATGGACAGACTTCGTGGTGTTCATTGTTTGATGATTTTTAATCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp TGTCGATTGGTACATTTGTGCAAAGACAGATATGACTTCCAAACAAGACAGACATTCAGGTGGGGAGTTTaGTCTTTCAAACAAAAGCCC +
Preference number: 5 (lower is better)
Translates to: CRLVHLCKDRYDFQTRQTFRWGV*SFKQKP
Trigger: GGGCTTTTGTTTGAAAGACAAAACTCCCCACCTGAA...TGTCTGTCTTGTTTGGAAGTCATATCTGTCTTTGCACAAATGTACCAATCGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CAA 90 bp AACTACTTGCAAGAGTATGACTCGCCTGTAACCAGCAAATTTTTACTCTTAGCTTTCAGGTGGGGAGTTTaGTCTTTCAAACAAAAGCCC +
Preference number: 5 (lower is better)
Translates to: NYLQEYDSPVTSKFLLLAFRWGV*SFKQKP
Trigger: GGGCTTTTGTTTGAAAGACAAAACTCCCCACCTGAA...AGCTAAGAGTAAAAATTTGCTGGTTACAGGCGAGTCATACTCTTGCAAGTAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp ACGATTAAAAATCATCAAACAATGAACACCACGAAGTCTGTCCATGCTCTCCACCATTCAAAATTAAAGTaGGGCCCTAGTCAGGGTTAC +
Preference number: 5 (lower is better)
Translates to: TIKNHQTMNTTKSVHALHHSKLK*GPSQGY
Trigger: GTAACCCTGACTAGGGCCCAACTTTAATTTTGAATG...GTGGAGAGCATGGACAGACTTCGTGGTGTTCATTGTTTGATGATTTTTAATCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CAA 90 bp AGGTTTCTCAAAACATTAACTGATTCCACCTACCAAAGGAGAATCAAAGGAAGGGGAATTTGGCAAGTTTaGGTACAGAACCACTGTGAG +
Preference number: 5 (lower is better)
Translates to: RFLKTLTDSTYQRRIKGRGIWQV*VQNHCE
Trigger: CTCACAGTGGTTCTGTACCAAAACTTGCCAAATTCC...CCTTCCTTTGATTCTCCTTTGGTAGGTGGAATCAGTTAATGTTTTGAGAAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp GCTGTCACTTCTGGAAATAGAAGTCTGCATTCAAAGAGCACGGCAATGGAAAATACAGGCTGGTTTTATTaGGGACAGAACAGGTTTTAT +
Preference number: 5 (lower is better)
Translates to: AVTSGNRSLHSKSTAMENTGWFY*GQNRFY
Trigger: ATAAAACCTGTTCTGTCCCAAATAAAACCAGCCTGT...ATTTTCCATTGCCGTGCTCTTTGAATGCAGACTTCTATTTCCAGAAGTGACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp TTTTATCACAATAGGCAACAAGATGGGTCTGGTTTTGGAATATGTTACCATTTGAAAGAAGCGTCTCTATaGGTGTCCATCTGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: FYHNRQQDGSGFGICYHLKEASL*VSIWRK
Trigger: CTTCCGCCAGATGGACACCAATAGAGACGCTTCTTT...CAAATGGTAACATATTCCAAAACCAGACCCATCTTGTTGCCTATTGTGATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522951.5
CDS TCA 90 bp GAGTTCTTTTTCTTCAGAAATCCAGTTACAAGGAGGAATAAGTATTaGAGACTAAGAAATGCATTTTGCAGCAGGTCCTCGCTGTACTGG +
Preference number: 5 (lower is better)
Translates to: EFFFFRNPVTRRNKY*RLRNAFCSRSSLYW
Trigger: CCAGTACAGCGAGGACCTGCTGCAAAATGCATTTCTTAGTCTTCAATACTTATTCCTCCTTGTAACTGGATTTCTGAAGAAAAAGAACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523923.5
CDS-3UTR CAA 90 bp TATACAGCCGTCTTTTTATTTTATCACAATAGGCAACAAGATGGGTCTGGTTTTCGAGTCTGCAGAGTATaGATCTGCTCAGAAAAGCAC +
Preference number: 5 (lower is better)
Translates to: YTAVFLFYHNRQQDGSGFRVCRV*ICSEKH
Trigger: GTGCTTTTCTGAGCAGATCAATACTCTGCAGACTCG...AAAACCAGACCCATCTTGTTGCCTATTGTGATAAAATAAAAAGACGGCTGTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CAA 90 bp AGGTTTCTCAAAACATTAACTGATTCCACCTACCAAAGGAGAATCAAAGGAAGGTCAAACAAAAGCCCCTaGAAGCTTGCAATAGAATCA +
Preference number: 5 (lower is better)
Translates to: RFLKTLTDSTYQRRIKGRSNKSP*KLAIES
Trigger: TGATTCTATTGCAAGCTTCAAGGGGCTTTTGTTTGA...CCTTCCTTTGATTCTCCTTTGGTAGGTGGAATCAGTTAATGTTTTGAGAAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS TCA 90 bp TTCATTTCAGAGTTCTTTTTCTTCTCGTTCCTTGCCAGCATCTTTTaGAGCTGCAACAAACATGACCTTGAAATCAACATAGTCTCAATG +
Preference number: 5 (lower is better)
Translates to: FISEFFFFSFLASIF*SCNKHDLEINIVSM
Trigger: CATTGAGACTATGTTGATTTCAAGGTCATGTTTGTTGCAGCTTCAAAAGATGCTGGCAAGGAACGAGAAGAAAAAGAACTCTGAAATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524137.5
CDS-3UTR CAA 90 bp TATACAGCCGTCTTTTTATTTTATCACAATAGGCAACAAGATGGGTCTGGTTTTAAACCATCTTATAGATaGCCTGCACGATCTCTAGCA +
Preference number: 5 (lower is better)
Translates to: YTAVFLFYHNRQQDGSGFKPSYR*PARSLA
Trigger: TGCTAGAGATCGTGCAGGCAATCTATAAGATGGTTT...AAAACCAGACCCATCTTGTTGCCTATTGTGATAAAATAAAAAGACGGCTGTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CAA 90 bp GGCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTCTTTCAAACAAAAGCCCCTaGAAGCTTGCAATAGAATCA +
Preference number: 5 (lower is better)
Translates to: GKTLNLVCITQYVIYSRLSNKSP*KLAIES
Trigger: TGATTCTATTGCAAGCTTCAAGGGGCTTTTGTTTGA...AAGACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CAA 90 bp CAAGGCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTTGTCGATTGGTACATTaGTGCAAAGACAGATATGAC +
Preference number: 5 (lower is better)
Translates to: QGKTLNLVCITQYVIYSRCRLVH*CKDRYD
Trigger: GTCATATCTGTCTTTGCACAAATGTACCAATCGACA...ACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
CDS-3UTR CAA 90 bp AGGTTTCTCAAAACATTAACTGATTCCACCTACCAAAGGAGAATCAAAGGAAGGGTCTACCATACAAATTaGGATTTCTGCTGCCAATTA +
Preference number: 5 (lower is better)
Translates to: RFLKTLTDSTYQRRIKGRVYHTN*DFCCQL
Trigger: TAATTGGCAGCAGAAATCCAAATTTGTATGGTAGAC...CCTTCCTTTGATTCTCCTTTGGTAGGTGGAATCAGTTAATGTTTTGAGAAACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS-3UTR CAA 90 bp GCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTCTTTTCAAACAAAAGCCCCTaGAAGCTTGCAATAGAATCA +
Preference number: 5 (lower is better)
Translates to: AKHLIWSALPNMLYTAVFSNKSP*KLAIES
Trigger: TGATTCTATTGCAAGCTTCAAGGGGCTTTTGTTTGA...AAAGACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CAA 90 bp GGCAAAACACTTAATTTGGTCTGCATTACCCAATATGTTATATACAGCCGTCTTGGCAAAACACTTAATTaGGTCTGCATTACCCAATAT +
Preference number: 5 (lower is better)
Translates to: GKTLNLVCITQYVIYSRLGKTLN*VCITQY
Trigger: ATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCC...AAGACGGCTGTATATAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522951.5
CDS-3UTR CAA 90 bp TATACAGCCGTCTTTTTATTTTATCACAATAGGCAACAAGATGGGTCTGGTTTTTTTCACCCTATGGATTaGGTTCTTTTTGGTCTACCA +
Preference number: 5 (lower is better)
Translates to: YTAVFLFYHNRQQDGSGFFHPMD*VLFGLP
Trigger: TGGTAGACCAAAAAGAACCAAATCCATAGGGTGAAA...AAAACCAGACCCATCTTGTTGCCTATTGTGATAAAATAAAAAGACGGCTGTATA
37% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
CDS GCA 72 bp GCCAGCCTGCACTGCTACTTTCCAAGGGGTGCCATCTaGTTGCCTCCTCGGGTCCTGGGAGGTCAGATTCAG +
Preference number: 6 (lower is better)
Translates to: ASLHCYFPRGAI*LPPRVLGGQIQ
Trigger: CTGAATCTGACCTCCCAGGACCCGAGGAGGCAAGCAGATGGCACCCCTTGGAAAGTAGCAGTGCAGGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395923.5
ENST00000522078.5
CDS GCA 72 bp GCCTGCACTGCTACTTTCCAAGGGGTGCCATCTGCTTaGCTCCTCGGGTCCTGGGAGGTCAGATTCAGCCTA +
Preference number: 6 (lower is better)
Translates to: ACTATFQGVPSA*LLGSWEVRFSL
Trigger: TAGGCTGAATCTGACCTCCCAGGACCCGAGGAGGCAAGCAGATGGCACCCCTTGGAAAGTAGCAGTGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395923.5
ENST00000522078.5
CDS CCA 72 bp TTCCAAGGGGTGCCATCTGCTTGCCTCCTCGGGTCCTaGGAGGTCAGATTCAGCCTAGAGCACCTCCTTCCA +
Preference number: 6 (lower is better)
Translates to: FQGVPSACLLGS*EVRFSLEHLLP
Trigger: TGGAAGGAGGTGCTCTAGGCTGAATCTGACCTCCCAGGACCCGAGGAGGCAAGCAGATGGCACCCCTTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395923.5
ENST00000522078.5
CDS GCA 72 bp CCTGGCGGCAAGAATTCAGAGTATGCAGTCACTCAGTaGCTGGGATCTCGGGGCCTTCCTCGGTATCACGAC +
Preference number: 6 (lower is better)
Translates to: PGGKNSEYAVTQ*LGSRGLPRYHD
Trigger: GTCGTGATACCGAGGAAGGCCCCGAGATCCCAGGCACTGAGTGACTGCATACTCTGAATTCTTGCCGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311028.4
ENST00000518661.5
ENST00000521964.5
ENST00000522078.5
CDS GCA 72 bp AGAAATCACTCGCCCAGGCCTCTAGCCAGCCTGCACTaGTACTTTCCAAGGGGTGCCATCTGCTTGCCTCCT +
Preference number: 6 (lower is better)
Translates to: RNHSPRPLASLH*YFPRGAICLPP
Trigger: AGGAGGCAAGCAGATGGCACCCCTTGGAAAGTAGCAGTGCAGGCTGGCTAGAGGCCTGGGCGAGTGATTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395923.5
ENST00000522078.5
CDS CCA 72 bp CAAAAGGGAACACAAGCAGCTCTACAATTCGATTGGTaGGCGCAGGGCTCAGAACTGGCCGGCACTGCTCGG +
Preference number: 6 (lower is better)
Translates to: QKGTQAALQFDW*AQGSELAGTAR
Trigger: CCGAGCAGTGCCGGCCAGTTCTGAGCCCTGCGCCCACCAATCGAATTGTAGAGCTGCTTGTGTTCCCTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522754.1
CDS CCA 72 bp GCGGCAAGAATTCAGAGTATGCAGTCACTCAGTGCCTaGGATCTCGGGGCCTTCCTCGGTATCACGACAGAT +
Preference number: 6 (lower is better)
Translates to: AARIQSMQSLSA*DLGAFLGITTD
Trigger: ATCTGTCGTGATACCGAGGAAGGCCCCGAGATCCCAGGCACTGAGTGACTGCATACTCTGAATTCTTGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311028.4
ENST00000518661.5
ENST00000521964.5
ENST00000522078.5
CDS CCA 72 bp AGGGAGCCTTGGAAGGCAGTTGAAAAGCTTCTCAGGTaGTGTCCTCTGGACTCTTCATGCCCACAAGGTGGG +
Preference number: 6 (lower is better)
Translates to: REPWKAVEKLLR*CPLDSSCPQGG
Trigger: CCCACCTTGTGGGCATGAAGAGTCCAGAGGACACCACCTGAGAAGCTTTTCAACTGCCTTCCAAGGCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395923.5
ENST00000522078.5
ENST00000522206.5
CDS CAA 72 bp GAATCAAAAGGGAACACAAGCAGCTCTACAATTCGATaGGTGGGCGCAGGGCTCAGAACTGGCCGGCACTGC +
Preference number: 6 (lower is better)
Translates to: ESKGNTSSSTIR*VGAGLRTGRHC
Trigger: GCAGTGCCGGCCAGTTCTGAGCCCTGCGCCCACCAATCGAATTGTAGAGCTGCTTGTGTTCCCTTTTGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522754.1
CDS CAA 90 bp TCCCTGCTCTACCGCAGTGAAGTTCAAGGGAGCCTTGGAAGGCAGTaGAAAAGCTTCTCAGGTGGTGTCCTCTGGACTCTTCATGCCCAC +
Preference number: 6 (lower is better)
Translates to: SLLYRSEVQGSLGRQ*KSFSGGVLWTLHAH
Trigger: GTGGGCATGAAGAGTCCAGAGGACACCACCTGAGAAGCTTTTCAACTGCCTTCCAAGGCTCCCTTGAACTTCACTGCGGTAGAGCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395923.5
ENST00000522078.5
ENST00000522206.5
CDS CCA 72 bp AATCAAAAGGGAACACAAGCAGCTCTACAATTCGATTaGTGGGCGCAGGGCTCAGAACTGGCCGGCACTGCT +
Preference number: 6 (lower is better)
Translates to: NQKGTQAALQFD*WAQGSELAGTA
Trigger: AGCAGTGCCGGCCAGTTCTGAGCCCTGCGCCCACCAATCGAATTGTAGAGCTGCTTGTGTTCCCTTTTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220931.11
ENST00000311028.4
ENST00000395923.5
ENST00000519508.6
ENST00000521599.5
ENST00000522754.1
CDS CAA 90 bp CTGAAGGGAATGTCCCCATCCGCATTGGACCTAGTCCTACCCCTATaGATTGGTATAAGATGTGGAGGCACAGGTAGAAGAAGCCGGGCC +
Preference number: 6 (lower is better)
Translates to: LKGMSPSALDLVLPL*IGIRCGGTGRRSRA
Trigger: GGCCCGGCTTCTTCTACCTGTGCCTCCACATCTTATACCAATCAATAGGGGTAGGACTAGGTCCAATGCGGATGGGGACATTCCCTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522754.1
CDS GCA 72 bp CCCTCACTCAGAAGAAGTGCAAGATTTAACAGTCCATaGTCTGCAGCCCCTGGAAACAGCAGTAGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: PSLRRSARFNSP*SAAPGNSSSSS
Trigger: GCTGCTGCTACTGCTGTTTCCAGGGGCTGCAGAGCATGGACTGTTAAATCTTGCACTTCTTCTGAGTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522252.5
CDS GCA 72 bp GGCTCACTCAGAAGAAGTGCAAGATTTAACAGTCCATaGTCTGCAGCCCCTGGAAACAGCAGTAGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: GSLRRSARFNSP*SAAPGNSSSSS
Trigger: GCTGCTGCTACTGCTGTTTCCAGGGGCTGCAGAGCATGGACTGTTAAATCTTGCACTTCTTCTGAGTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521957.1
CDS GCA 72 bp AGCTCACTCAGAAGAAGTGCAAGATTTAACAGTCCATaGTCTGCAGCCCCTGGAAACAGCAGTAGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: SSLRRSARFNSP*SAAPGNSSSSS
Trigger: GCTGCTGCTACTGCTGTTTCCAGGGGCTGCAGAGCATGGACTGTTAAATCTTGCACTTCTTCTGAGTGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220931.11
ENST00000522448.5
ENST00000522951.5
CDS GCA 72 bp GTCTCACTCAGAAGAAGTGCAAGATTTAACAGTCCATaGTCTGCAGCCCCTGGAAACAGCAGTAGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: VSLRRSARFNSP*SAAPGNSSSSS
Trigger: GCTGCTGCTACTGCTGTTTCCAGGGGCTGCAGAGCATGGACTGTTAAATCTTGCACTTCTTCTGAGTGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521371.1
ENST00000524101.1
CDS GCA 72 bp TCCTCACTCAGAAGAAGTGCAAGATTTAACAGTCCATaGTCTGCAGCCCCTGGAAACAGCAGTAGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: SSLRRSARFNSP*SAAPGNSSSSS
Trigger: GCTGCTGCTACTGCTGTTTCCAGGGGCTGCAGAGCATGGACTGTTAAATCTTGCACTTCTTCTGAGTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520346.1
CDS GCA 72 bp TTTCTTCTGGAATCCCTGACACTGATGGGAACAGATTaGTCACAAATGAGGCCGGCTGTTCACCAGCTGCAG +
Preference number: 6 (lower is better)
Translates to: FLLESLTLMGTD*SQMRPAVHQLQ
Trigger: CTGCAGCTGGTGAACAGCCGGCCTCATTTGTGAGCAATCTGTTCCCATCAGTGTCAGGGATTCCAGAAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521957.1
CDS CAA 90 bp TCACCCCATGCCTGTGACCTCCACATGGGACTCAGTAAGGGCCCTTaGACCTCTGTGGTCAAAGGTAGTTTTTATTTGGGAAGAGGAATG +
Preference number: 6 (lower is better)
Translates to: SPHACDLHMGLSKGP*TSVVKGSFYLGRGM
Trigger: CATTCCTCTTCCCAAATAAAAACTACCTTTGACCACAGAGGTCAAAGGGCCCTTACTGAGTCCCATGTGGAGGTCACAGGCATGGGGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522754.1
CDS CAA 90 bp ATTAAACCTCCCAAATGCGGGCTGAAGGGAATGTCCCCATCCGCATaGGACCTAGTCCTACCCCTATTGATTGGTATAAGATGTGGAGGC +
Preference number: 6 (lower is better)
Translates to: IKPPKCGLKGMSPSA*DLVLPLLIGIRCGG
Trigger: GCCTCCACATCTTATACCAATCAATAGGGGTAGGACTAGGTCCAATGCGGATGGGGACATTCCCTTCAGCCCGCATTTGGGAGGTTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522754.1
CDS TCA 72 bp TGCATCCTCAGGCCTGAGCTAAACTGGGTACAGCTATaGGATCTGATGGGCGAAAGAGGATTCTGTGGAGTT +
Preference number: 6 (lower is better)
Translates to: CILRPELNWVQL*DLMGERGFCGV
Trigger: AACTCCACAGAATCCTCTTTCGCCCATCAGATCTCATAGCTGTACCCAGTTTAGCTCAGGCCTGAGGATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522754.1
CDS GCA 72 bp TTCTCACTCAGAAGAAGTGCAAGATTTAACAGTCCATaGTCTGCAGCCCCTGGAAACAGCAGTAGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: FSLRRSARFNSP*SAAPGNSSSSS
Trigger: GCTGCTGCTACTGCTGTTTCCAGGGGCTGCAGAGCATGGACTGTTAAATCTTGCACTTCTTCTGAGTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519098.5
ENST00000523645.5
CDS GCA 72 bp ATGGCACACAATAGACCTATCATTAAACCTCCCAAATaGGGGCTGAAGGGAATGTCCCCATCCGCATTGGAC +
Preference number: 6 (lower is better)
Translates to: MAHNRPIIKPPK*GLKGMSPSALD
Trigger: GTCCAATGCGGATGGGGACATTCCCTTCAGCCCGCATTTGGGAGGTTTAATGATAGGTCTATTGTGTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522754.1
CDS CAA 72 bp GCCTGTGACCTCCACATGGGACTCAGTAAGGGCCCTTaGACCTCTGTGGTCAAAGGTAGTTTTTATTTGGGA +
Preference number: 6 (lower is better)
Translates to: ACDLHMGLSKGP*TSVVKGSFYLG
Trigger: TCCCAAATAAAAACTACCTTTGACCACAGAGGTCAAAGGGCCCTTACTGAGTCCCATGTGGAGGTCACAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522754.1
CDS CAA 72 bp TTTTCTTCTGGAATCCCTGACACTGATGGGAACAGATaGCTCACAAATGAGGCCGGCTGTTCACCAGCTGCA +
Preference number: 6 (lower is better)
Translates to: FSSGIPDTDGNR*LTNEAGCSPAA
Trigger: TGCAGCTGGTGAACAGCCGGCCTCATTTGTGAGCAATCTGTTCCCATCAGTGTCAGGGATTCCAGAAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521957.1
CDS CAA 90 bp CAGAGTTCTTTTTCTTCTGGAATCCCTGACACTGATGGGAACAGATaGCTCACAAATGAGGCCGGCTGTTCACCAGCTGCAGAATGTCTC +
Preference number: 6 (lower is better)
Translates to: QSSFSSGIPDTDGNR*LTNEAGCSPAAECL
Trigger: GAGACATTCTGCAGCTGGTGAACAGCCGGCCTCATTTGTGAGCAATCTGTTCCCATCAGTGTCAGGGATTCCAGAAGAAAAAGAACTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521957.1
CDS TCA 72 bp CAAGATCTGGCAGACAGTAAGTGGTGCAGTCAGATTTaGATACAGGCACACCAGACTCCAAGTCTCTGCTTC +
Preference number: 6 (lower is better)
Translates to: QDLADSKWCSQI*IQAHQTPSLCF
Trigger: GAAGCAGAGACTTGGAGTCTGGTGTGCCTGTATTCAAATCTGACTGCACCACTTACTGTCTGCCAGATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518952.5
ENST00000523645.5
CDS GCA 72 bp CTCCTCAAGGATGACAGACATGTAACACTCTGTAAGTaGATGCCACATGTTTCCCCAGGCAGACTTCTAGTC +
Preference number: 6 (lower is better)
Translates to: LLKDDRHVTLCK*MPHVSPGRLLV
Trigger: GACTAGAAGTCTGCCTGGGGAAACATGTGGCATGCACTTACAGAGTGTTACATGTCTGTCATCCTTGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522754.1
CDS CCA 72 bp GCGGCAAGAATTCAGTTTCTGACTGTCAGCAACGAGTaGTCCCAGGAGACCAAAGTTGAGATAATCTGTGTC +
Preference number: 6 (lower is better)
Translates to: AARIQFLTVSNE*SQETKVEIICV
Trigger: GACACAGATTATCTCAACTTTGGTCTCCTGGGACCACTCGTTGCTGACAGTCAGAAACTGAATTCTTGCCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520425.5
CDS CAA 72 bp ATGTCCCCATCCGCATTGGACCTAGTCCTACCCCTATaGATTGGTATAAGATGTGGAGGCACAGGTAGAAGA +
Preference number: 6 (lower is better)
Translates to: MSPSALDLVLPL*IGIRCGGTGRR
Trigger: TCTTCTACCTGTGCCTCCACATCTTATACCAATCAATAGGGGTAGGACTAGGTCCAATGCGGATGGGGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522754.1
CDS TCA 72 bp ACTTCTAGTCCATTCCAGTGCTTTTCTCCCTGTGTGTaGCAATGGTCTCAAGTTCCTTCTCAGCAAGCTTCC +
Preference number: 6 (lower is better)
Translates to: TSSPFQCFSPCV*QWSQVPSQQAS
Trigger: GGAAGCTTGCTGAGAAGGAACTTGAGACCATTGTCACACACAGGGAGAAAAGCACTGGAATGGACTAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522754.1
CDS TCA 72 bp AGTGGATGCCTATCATGGACCCTTGAGAGTCCACAATaGCTCCTCAAGGATGACAGACATGTAACACTCTGT +
Preference number: 6 (lower is better)
Translates to: SGCLSWTLESPQ*LLKDDRHVTLC
Trigger: ACAGAGTGTTACATGTCTGTCATCCTTGAGGAGTCATTGTGGACTCTCAAGGGTCCATGATAGGCATCCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522754.1
CDS TCA 72 bp AGTGGCCAGTGTGGCTCGTTCCTTGCCAGCATCTTTTaGAGCTGCAACAAACATGACCTTGAAATCAACATA +
Preference number: 6 (lower is better)
Translates to: SGQCGSFLASIF*SCNKHDLEINI
Trigger: TATGTTGATTTCAAGGTCATGTTTGTTGCAGCTTCAAAAGATGCTGGCAAGGAACGAGCCACACTGGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521371.1
CDS TCA 72 bp TTAATAAGCTCCGGTGTGATGCTGATGCTGCTGTTCTaGAGACGCTGCTTTGAAAAGCAAGGTTCCCACTTT +
Preference number: 6 (lower is better)
Translates to: LISSGVMLMLLF*RRCFEKQGSHF
Trigger: AAAGTGGGAACCTTGCTTTTCAAAGCAGCGTCTTCAGAACAGCAGCATCAGCATCACACCGGAGCTTATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522754.1
CDS CCA 72 bp GCGGCAAGAATTCAGTTTCTGACTGTCAGCAACGAGTaGTCCCAGGAGACCAAAGTTGAGATAATAGCTTTA +
Preference number: 6 (lower is better)
Translates to: AARIQFLTVSNE*SQETKVEIIAL
Trigger: TAAAGCTATTATCTCAACTTTGGTCTCCTGGGACCACTCGTTGCTGACAGTCAGAAACTGAATTCTTGCCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520690.5
CDS CCA 72 bp CACCATATCTCATTTAAAGAAAGAGAGAGTTCAGCATaGCTGGGGAGGCCTCAGGAAACTTACAATCATGGT +
Preference number: 6 (lower is better)
Translates to: HHISFKERESSA*LGRPQETYNHG
Trigger: ACCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGCTGAACTCTCTCTTTCTTTAAATGAGATATGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518952.5
CDS CCA 72 bp ACAGCTATGAGATCTGATGGGCGAAAGAGGATTCTGTaGAGTTTTGTAAGCACTACTGAAACTATCACCCCA +
Preference number: 6 (lower is better)
Translates to: TAMRSDGRKRIL*SFVSTTETITP
Trigger: TGGGGTGATAGTTTCAGTAGTGCTTACAAAACTCCACAGAATCCTCTTTCGCCCATCAGATCTCATAGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522754.1
CDS TCA 72 bp CAAGTCAGAAGAAATCACTCTGGGAATTCGGAGGAGTaGTATTTCTTTGAAGGAATCAGGAAGGACTTCGTG +
Preference number: 6 (lower is better)
Translates to: QVRRNHSGNSEE*YFFEGIRKDFV
Trigger: CACGAAGTCCTTCCTGATTCCTTCAAAGAAATATCACTCCTCCGAATTCCCAGAGTGATTTCTTCTGACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521599.5
CDS CCA 72 bp ATATCTCATTTAAAGAAAGAGAGAGTTCAGCATGGCTaGGGAGGCCTCAGGAAACTTACAATCATGGTAGAA +
Preference number: 6 (lower is better)
Translates to: ISHLKKERVQHG*GGLRKLTIMVE
Trigger: TTCTACCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGCTGAACTCTCTCTTTCTTTAAATGAGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518952.5
CDS TCA 72 bp CATCCTGGCGGCAAGAATTCAGTTCAAACAGCTGTGTaGAGTTCAAATCCTCAATTTCATTTCAGAGTTCTT +
Preference number: 6 (lower is better)
Translates to: HPGGKNSVQTAV*SSNPQFHFRVL
Trigger: AAGAACTCTGAAATGAAATTGAGGATTTGAACTTCACACAGCTGTTTGAACTGAATTCTTGCCGCCAGGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523923.5
CDS TCA 72 bp GAGTTCTTTTTCTTCTCGTTCCTTGCCAGCATCTTTTaGAGCTGCAACAAACATGACCTTGAAATCAACATA +
Preference number: 6 (lower is better)
Translates to: EFFFFSFLASIF*SCNKHDLEINI
Trigger: TATGTTGATTTCAAGGTCATGTTTGTTGCAGCTTCAAAAGATGCTGGCAAGGAACGAGAAGAAAAAGAACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524137.5