Pregenerated sensors for NBR2 (Homo sapiens)
Ensembl gene IDs: ENSG00000198496Ensembl transcript IDs: ENST00000356906.7, ENST00000460115.5, ENST00000467245.5, ENST00000657841.1
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGTGGGGGAGTATGGAGTCCAGCTGACCACCAGAGCCTGCACGCCTaGTGCTACAGGGGAGGAAAGGATGACTTCTACCTCCTTTCCACA | + |
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Preference number: 5 (lower is better) Translates to: GGGVWSPADHQSLHA*CYRGGKDDFYLLST Trigger: TGTGGAAAGGAGGTAGAAGTCATCCTTTCCTCCCCTGTAGCAGCAGGCGTGCAGGCTCTGGTGGTCAGCTGGACTCCATACTCCCCCACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000356906.7 ENST00000460115.5 ENST00000467245.5 ENST00000657841.1 |
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| CDS GCA 90 bp | GGGGGAGTATGGAGTCCAGCTGACCACCAGAGCCTGCACGCCTGCTaGTACAGGGGAGGAAAGGATGACTTCTACCTCCTTTCCACATTC | + |
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Preference number: 5 (lower is better) Translates to: GGVWSPADHQSLHAC*YRGGKDDFYLLSTF Trigger: GAATGTGGAAAGGAGGTAGAAGTCATCCTTTCCTCCCCTGTAGCAGCAGGCGTGCAGGCTCTGGTGGTCAGCTGGACTCCATACTCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000356906.7 ENST00000460115.5 ENST00000467245.5 ENST00000657841.1 |
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| CDS CCA 90 bp | CGCCAACCCAGCAGCTCTCCATGTCCTGTCTTTCAAGGATTTTTCTaGAGGCTTTGTCACGCAGGCATGATCGAGCTCCAGCTCTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: RQPSSSPCPVFQGFF*RLCHAGMIELQLCS Trigger: GGAGCAGAGCTGGAGCTCGATCATGCCTGCGTGACAAAGCCTCCAGAAAAATCCTTGAAAGACAGGACATGGAGAGCTGCTGGGTTGGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000356906.7 ENST00000460115.5 ENST00000657841.1 |
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| CDS TCA 90 bp | TGGATTAACATCCAAAGGACTGAGCCAGGGCTAGAAGGACGTAGGTaGCCTGCCCAAGTGTCCAAGGCCACACATCCAAAACGACAAGTT | + |
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Preference number: 5 (lower is better) Translates to: WINIQRTEPGLEGRR*PAQVSKATHPKRQV Trigger: AACTTGTCGTTTTGGATGTGTGGCCTTGGACACTTGGGCAGGTCACCTACGTCCTTCTAGCCCTGGCTCAGTCCTTTGGATGTTAATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467245.5 |
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| CDS CCA 90 bp | TCTACCTCCTTTCCACATTCCAAATTCCACGTGACTACCTTTTATTaGCAGCACCCTGCTGGCAAGGGAGCCTTGATGTGTGCTTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: STSFPHSKFHVTTFY*QHPAGKGALMCASW Trigger: CCAGGAAGCACACATCAAGGCTCCCTTGCCAGCAGGGTGCTGCCAATAAAAGGTAGTCACGTGGAATTTGGAATGTGGAAAGGAGGTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356906.7 ENST00000460115.5 ENST00000467245.5 ENST00000657841.1 |
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| CDS TCA 90 bp | TTGGTGACCAGTCCCCAAATAAGGAGCCCACCAAGAGTCACCTCATaGGAACAAAGGACGCTCCTATCATGCAGAAAATTCCAAGGGATT | + |
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Preference number: 5 (lower is better) Translates to: LVTSPQIRSPPRVTS*EQRTLLSCRKFQGI Trigger: AATCCCTTGGAATTTTCTGCATGATAGGAGCGTCCTTTGTTCTCATGAGGTGACTCTTGGTGGGCTCCTTATTTGGGGACTGGTCACCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000356906.7 ENST00000460115.5 ENST00000657841.1 |
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| CDS GCA 72 bp | GTGGGGGAGTATGGAGTCCAGCTGACCACCAGAGCCTaGACGCCTGCTGCTACAGGGGAGGAAAGGATGACT | + |
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Preference number: 6 (lower is better) Translates to: VGEYGVQLTTRA*TPAATGEERMT Trigger: AGTCATCCTTTCCTCCCCTGTAGCAGCAGGCGTGCAGGCTCTGGTGGTCAGCTGGACTCCATACTCCCCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000356906.7 ENST00000460115.5 ENST00000467245.5 ENST00000657841.1 |
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| CDS TCA 72 bp | GAAGAATGGCGTAAACCTGGGAGGCGGAAGTTGCAGTaGGCCGAGATCGTGCCTCTAGCCTGGGCAACAGAG | + |
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Preference number: 6 (lower is better) Translates to: EEWRKPGRRKLQ*AEIVPLAWATE Trigger: CTCTGTTGCCCAGGCTAGAGGCACGATCTCGGCTCACTGCAACTTCCGCCTCCCAGGTTTACGCCATTCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657841.1 |
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| CDS CCA 72 bp | CACCCTGCTGGCAAGGGAGCCTTGATGTGTGCTTCCTaGGCTTCCAGCACCTCTTCATCTTCCTCATCCAGG | + |
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Preference number: 6 (lower is better) Translates to: HPAGKGALMCAS*ASSTSSSSSSR Trigger: CCTGGATGAGGAAGATGAAGAGGTGCTGGAAGCCCAGGAAGCACACATCAAGGCTCCCTTGCCAGCAGGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000356906.7 ENST00000460115.5 |
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| CDS TCA 72 bp | CCTTTTATTGGCAGCACCCTGCTGGCAAGGGAGCCTTaGTGTGTGCTTCCTGGGCTTCCAGCACCTGGAGTT | + |
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Preference number: 6 (lower is better) Translates to: PFIGSTLLAREP*CVLPGLPAPGV Trigger: AACTCCAGGTGCTGGAAGCCCAGGAAGCACACATCAAGGCTCCCTTGCCAGCAGGGTGCTGCCAATAAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467245.5 |
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| CDS TCA 72 bp | CCTTTTATTGGCAGCACCCTGCTGGCAAGGGAGCCTTaGTGTGTGCTTCCTGGGCTTCCAGCACCGAAACTG | + |
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Preference number: 6 (lower is better) Translates to: PFIGSTLLAREP*CVLPGLPAPKL Trigger: CAGTTTCGGTGCTGGAAGCCCAGGAAGCACACATCAAGGCTCCCTTGCCAGCAGGGTGCTGCCAATAAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657841.1 |
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| CDS CAA 90 bp | CACGTGACTACCTTTTATTGGCAGCACCCTGCTGGCAAGGGAGCCTaGATGTGTGCTTCCTGGGCTTCCAGCACCTGGAGTTTGTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: HVTTFYWQHPAGKGA*MCASWASSTWSLFW Trigger: CCAGAACAAACTCCAGGTGCTGGAAGCCCAGGAAGCACACATCAAGGCTCCCTTGCCAGCAGGGTGCTGCCAATAAAAGGTAGTCACGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467245.5 |
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| CDS TCA 72 bp | CCTTTTATTGGCAGCACCCTGCTGGCAAGGGAGCCTTaGTGTGTGCTTCCTGGGCTTCCAGCACCTCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: PFIGSTLLAREP*CVLPGLPAPLH Trigger: ATGAAGAGGTGCTGGAAGCCCAGGAAGCACACATCAAGGCTCCCTTGCCAGCAGGGTGCTGCCAATAAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000356906.7 ENST00000460115.5 |
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| CDS CCA 72 bp | CACCCTGCTGGCAAGGGAGCCTTGATGTGTGCTTCCTaGGCTTCCAGCACCTGGAGTTTGTTCTGGAATGTT | + |
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Preference number: 6 (lower is better) Translates to: HPAGKGALMCAS*ASSTWSLFWNV Trigger: AACATTCCAGAACAAACTCCAGGTGCTGGAAGCCCAGGAAGCACACATCAAGGCTCCCTTGCCAGCAGGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467245.5 |
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| CDS CAA 72 bp | ACCTTTTATTGGCAGCACCCTGCTGGCAAGGGAGCCTaGATGTGTGCTTCCTGGGCTTCCAGCACCGAAACT | + |
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Preference number: 6 (lower is better) Translates to: TFYWQHPAGKGA*MCASWASSTET Trigger: AGTTTCGGTGCTGGAAGCCCAGGAAGCACACATCAAGGCTCCCTTGCCAGCAGGGTGCTGCCAATAAAAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657841.1 |
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| CDS CAA 90 bp | CACGTGACTACCTTTTATTGGCAGCACCCTGCTGGCAAGGGAGCCTaGATGTGTGCTTCCTGGGCTTCCAGCACCTCTTCATCTTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: HVTTFYWQHPAGKGA*MCASWASSTSSSSS Trigger: TGAGGAAGATGAAGAGGTGCTGGAAGCCCAGGAAGCACACATCAAGGCTCCCTTGCCAGCAGGGTGCTGCCAATAAAAGGTAGTCACGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000356906.7 ENST00000460115.5 |
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| CDS TCA 72 bp | GAGCCTGCACGCCTGCTGCTACAGGGGAGGAAAGGATaGCTTCTACCTCCTTTCCACATTCCAAATTCCACG | + |
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Preference number: 6 (lower is better) Translates to: EPARLLLQGRKG*LLPPFHIPNST Trigger: CGTGGAATTTGGAATGTGGAAAGGAGGTAGAAGTCATCCTTTCCTCCCCTGTAGCAGCAGGCGTGCAGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356906.7 ENST00000460115.5 ENST00000467245.5 ENST00000657841.1 |
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| CDS CCA 72 bp | ATTCCACGTGACTACCTTTTATTGGCAGCACCCTGCTaGCAAGGGAGCCTTGATGTGTGCTTCCTGGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: IPRDYLLLAAPC*QGSLDVCFLGF Trigger: GAAGCCCAGGAAGCACACATCAAGGCTCCCTTGCCAGCAGGGTGCTGCCAATAAAAGGTAGTCACGTGGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356906.7 ENST00000460115.5 ENST00000467245.5 ENST00000657841.1 |
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| CDS CCA 72 bp | AGCAGCTCTCCATGTCCTGTCTTTCAAGGATTTTTCTaGAGGCTTTGTCACGCAGGCATGATCGAGCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: SSSPCPVFQGFF*RLCHAGMIELQ Trigger: CTGGAGCTCGATCATGCCTGCGTGACAAAGCCTCCAGAAAAATCCTTGAAAGACAGGACATGGAGAGCTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000356906.7 ENST00000460115.5 ENST00000657841.1 |
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| CDS CAA 90 bp | TTCTACCTCCTTTCCACATTCCAAATTCCACGTGACTACCTTTTATaGGCAGCACCCTGCTGGCAAGGGAGCCTTGATGTGTGCTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: FYLLSTFQIPRDYLL*AAPCWQGSLDVCFL Trigger: CAGGAAGCACACATCAAGGCTCCCTTGCCAGCAGGGTGCTGCCAATAAAAGGTAGTCACGTGGAATTTGGAATGTGGAAAGGAGGTAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356906.7 ENST00000460115.5 ENST00000467245.5 ENST00000657841.1 |
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| CDS CCA 72 bp | TTTCCACATTCCAAATTCCACGTGACTACCTTTTATTaGCAGCACCCTGCTGGCAAGGGAGCCTTGATGTGT | + |
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Preference number: 6 (lower is better) Translates to: FPHSKFHVTTFY*QHPAGKGALMC Trigger: ACACATCAAGGCTCCCTTGCCAGCAGGGTGCTGCCAATAAAAGGTAGTCACGTGGAATTTGGAATGTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356906.7 ENST00000460115.5 ENST00000467245.5 ENST00000657841.1 |
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| CDS TCA 72 bp | AGTCCCCAAATAAGGAGCCCACCAAGAGTCACCTCATaGGAACAAAGGACGCTCCTATCATGCAGAAAATTC | + |
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Preference number: 6 (lower is better) Translates to: SPQIRSPPRVTS*EQRTLLSCRKF Trigger: GAATTTTCTGCATGATAGGAGCGTCCTTTGTTCTCATGAGGTGACTCTTGGTGGGCTCCTTATTTGGGGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000356906.7 ENST00000460115.5 ENST00000657841.1 |
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| CDS TCA 72 bp | CAAGATCATCTCTTTTGTAGGAACACAGATGGATCTTaGGGCCATTATCCTCAGCAAACACAGCTGATTTCC | + |
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Preference number: 6 (lower is better) Translates to: QDHLFCRNTDGS*GHYPQQTQLIS Trigger: GGAAATCAGCTGTGTTTGCTGAGGATAATGGCCTCAAGATCCATCTGTGTTCCTACAAAAGAGATGATCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000356906.7 ENST00000460115.5 |
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| CDS TCA 72 bp | CAAGATCATCTCTTTTGTAGGAACACAGATGGATCTTaGGGCCATTATCCTCAGCAAACTAAGAAAGGAACA | + |
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Preference number: 6 (lower is better) Translates to: QDHLFCRNTDGS*GHYPQQTKKGT Trigger: TGTTCCTTTCTTAGTTTGCTGAGGATAATGGCCTCAAGATCCATCTGTGTTCCTACAAAAGAGATGATCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657841.1 |
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