Pregenerated sensors for NBPF9 (Homo sapiens)
Ensembl gene IDs: ENSG00000269713Ensembl transcript IDs: ENST00000584027.8, ENST00000613595.4, ENST00000613969.4, ENST00000615421.4, ENST00000621074.4, ENST00000621645.4
Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
3UTR TCA 72 bp | ATGGACAAACTAGACCTTCTCTGCCCGCAGATGGGCTaGGGTTGGAAACTCACAGCATTGTCTCTGCAGTGT | + |
Preference number: 3 (lower is better) Translates to: MDKLDLLCPQMG*GWKLTALSLQC Trigger: ACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATCTGCGGGCAGAGAAGGTCTAGTTTGTCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000584027.8 ENST00000613595.4 ENST00000613969.4 ENST00000615421.4 ENST00000621074.4 ENST00000621645.4 |
||
CDS TCA 72 bp | AGGTGGGGCCAGGGACTCCAAATGTTCCTTTGGCTCTaGTATTCTGTGACTCTGGTTTCTTTTTGGCTACTT | + |
Preference number: 6 (lower is better) Translates to: RWGQGLQMFLWL*YSVTLVSFWLL Trigger: AAGTAGCCAAAAAGAAACCAGAGTCACAGAATATCAGAGCCAAAGGAACATTTGGAGTCCCTGGCCCCACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000621645.4 |