Pregenerated sensors for NBPF4 (Homo sapiens)

Ensembl gene IDs: ENSG00000196427

Ensembl transcript IDs: ENST00000415641.8

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	AACCAAGTGACCATCCTAGTATCACCGCACTGGGGATGGACACACTaGGCCTTCTCTGCCTGCAGATGGGCTGAGGTAGGAAGCTCACAG	+
Preference number: 5 (lower is better) Translates to: NQVTILVSPHWGWTH*AFSACRWAEVGSSQ Trigger: CTGTGAGCTTCCTACCTCAGCCCATCTGCAGGCAGAGAAGGCCCAGTGTGTCCATCCCCAGTGCGGTGATACTAGGATGGTCACTTGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415641.8
CDS GCA 90 bp	TCTGCCTGCAGATGGGCTGAGGTAGGAAGCTCACAGCATGGACTCTaGAGAGTTCCTGGCAAAATGTTTAGGCTGAATTTAATCATGACG	+
Preference number: 5 (lower is better) Translates to: SACRWAEVGSSQHGL*RVPGKMFRLNLIMT Trigger: CGTCATGATTAAATTCAGCCTAAACATTTTGCCAGGAACTCTGCAGAGTCCATGCTGTGAGCTTCCTACCTCAGCCCATCTGCAGGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415641.8
CDS GCA 72 bp	CCGCACTGGGGATGGACACACTGGGCCTTCTCTGCCTaGAGATGGGCTGAGGTAGGAAGCTCACAGCATGGA	+
Preference number: 6 (lower is better) Translates to: PHWGWTHWAFSA*RWAEVGSSQHG Trigger: TCCATGCTGTGAGCTTCCTACCTCAGCCCATCTGCAGGCAGAGAAGGCCCAGTGTGTCCATCCCCAGTGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415641.8
CDS CCA 72 bp	TGGGGATGGACACACTGGGCCTTCTCTGCCTGCAGATaGGCTGAGGTAGGAAGCTCACAGCATGGACTCTGC	+
Preference number: 6 (lower is better) Translates to: WGWTHWAFSACR*AEVGSSQHGLC Trigger: GCAGAGTCCATGCTGTGAGCTTCCTACCTCAGCCCATCTGCAGGCAGAGAAGGCCCAGTGTGTCCATCCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415641.8
CDS CCA 72 bp	ACCATCCTAGTATCACCGCACTGGGGATGGACACACTaGGCCTTCTCTGCCTGCAGATGGGCTGAGGTAGGA	+
Preference number: 6 (lower is better) Translates to: TILVSPHWGWTH*AFSACRWAEVG Trigger: TCCTACCTCAGCCCATCTGCAGGCAGAGAAGGCCCAGTGTGTCCATCCCCAGTGCGGTGATACTAGGATGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415641.8
CDS TCA 72 bp	ATGGACACACTGGGCCTTCTCTGCCTGCAGATGGGCTaGGGTAGGAAGCTCACAGCATGGACTCTGCAGAGT	+
Preference number: 6 (lower is better) Translates to: MDTLGLLCLQMG*GRKLTAWTLQS Trigger: ACTCTGCAGAGTCCATGCTGTGAGCTTCCTACCTCAGCCCATCTGCAGGCAGAGAAGGCCCAGTGTGTCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415641.8
CDS CCA 72 bp	AACCAAGTGACCATCCTAGTATCACCGCACTGGGGATaGACACACTGGGCCTTCTCTGCCTGCAGATGGGCT	+
Preference number: 6 (lower is better) Translates to: NQVTILVSPHWG*THWAFSACRWA Trigger: AGCCCATCTGCAGGCAGAGAAGGCCCAGTGTGTCCATCCCCAGTGCGGTGATACTAGGATGGTCACTTGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415641.8
CDS CCA 72 bp	CTCCTTAACCAAGTGACCATCCTAGTATCACCGCACTaGGGATGGACACACTGGGCCTTCTCTGCCTGCAGA	+
Preference number: 6 (lower is better) Translates to: LLNQVTILVSPH*GWTHWAFSACR Trigger: TCTGCAGGCAGAGAAGGCCCAGTGTGTCCATCCCCAGTGCGGTGATACTAGGATGGTCACTTGGTTAAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415641.8
CDS GCA 72 bp	AGATGGGCTGAGGTAGGAAGCTCACAGCATGGACTCTaGAGAGTTCCTGGCAAAATGTTTAGGCTGAATTTA	+
Preference number: 6 (lower is better) Translates to: RWAEVGSSQHGL*RVPGKMFRLNL Trigger: TAAATTCAGCCTAAACATTTTGCCAGGAACTCTGCAGAGTCCATGCTGTGAGCTTCCTACCTCAGCCCATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415641.8