Pregenerated sensors for NBPF26 (Homo sapiens)
Ensembl gene IDs: ENSG00000273136Ensembl transcript IDs: ENST00000652444.1
Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AACTGCTTTCCCAAGTACTTCATTATAAGTAAGGTGTCTCTAAAAGGGACAGATTCACAGCATTGTCTCTaGAGTGTTCCCGGCAAAACG | + |
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Preference number: 2 (lower is better) Translates to: NCFPKYFIISKVSLKGTDSQHCL*SVPGKT Trigger: CGTTTTGCCGGGAACACTGCAGAGACAATGCTGTGA...ATCTGTCCCTTTTAGAGACACCTTACTTATAATGAAGTACTTGGGAAAGCAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652444.1 |
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| CDS-3UTR TCA 90 bp | CTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCGGCAAAACGTTTACCAGCAGCTCTCTGCTaGGCCTGGGACCTGTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LRLETHSIVSAVFPAKRLPAALC*AWDLLP Trigger: AGGCAACAGGTCCCAGGCTCAGCAGAGAGCTGCTGG...TAAACGTTTTGCCGGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652444.1 |
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| CDS-3UTR TCA 90 bp | CTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCGGCAAAACGTTTACCATCAGCATGCTGTTaGGCCTGGGGCATGGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LRLETHSIVSAVFPAKRLPSACC*AWGMVG Trigger: ACCCACCATGCCCCAGGCTCAACAGCATGCTGATGG...TAAACGTTTTGCCGGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652444.1 |
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| CDS-3UTR CCA 90 bp | CTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCGGCAAAACGTTTAACTCCTGCAGATTCCTaGGAGACACTGGTCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LRLETHSIVSAVFPAKRLTPADS*ETLVLF Trigger: AAAAAGGACCAGTGTCTCCCAGGAATCTGCAGGAGT...TAAACGTTTTGCCGGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652444.1 |
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| CDS-3UTR CCA 90 bp | AACTGCTTTCCCAAGTACTTCATTATAAGTAAGGTGTCTCTAAAAGGGACAGATCCTTCTGCATCTCCCTaGGGGCAGACGATTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NCFPKYFIISKVSLKGTDPSASP*GQTISA Trigger: TGCAGAAATCGTCTGCCCCCAGGGAGATGCAGAAGG...ATCTGTCCCTTTTAGAGACACCTTACTTATAATGAAGTACTTGGGAAAGCAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652444.1 |
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| CDS-3UTR CCA 90 bp | AACTGCTTTCCCAAGTACTTCATTATAAGTAAGGTGTCTCTAAAAGGGACAGATTCTTCTGCACCTCCCTaGGGGCAGATGATTCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: NCFPKYFIISKVSLKGTDSSAPP*GQMIPV Trigger: TACTGGAATCATCTGCCCCCAGGGAGGTGCAGAAGA...ATCTGTCCCTTTTAGAGACACCTTACTTATAATGAAGTACTTGGGAAAGCAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652444.1 |
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| CDS-3UTR CCA 90 bp | AACTGCTTTCCCAAGTACTTCATTATAAGTAAGGTGTCTCTAAAAGGGACAGATTTCTCTGCCCGCAGATaGGCTGAGGTTGGAAACTCA | + |
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Preference number: 4 (lower is better) Translates to: NCFPKYFIISKVSLKGTDFSARR*AEVGNS Trigger: TGAGTTTCCAACCTCAGCCCATCTGCGGGCAGAGAA...ATCTGTCCCTTTTAGAGACACCTTACTTATAATGAAGTACTTGGGAAAGCAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652444.1 |
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| CDS-3UTR CAA 90 bp | CTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCGGCAAAACGTTTATCCATCAGCATGCTGTaGAGCCTGGGGCATGGTGGG | + |
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Preference number: 5 (lower is better) Translates to: LRLETHSIVSAVFPAKRLSISML*SLGHGG Trigger: CCCACCATGCCCCAGGCTCAACAGCATGCTGATGGA...TAAACGTTTTGCCGGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652444.1 |
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